Spiroplasma kunkelii CR2-3x plasmid pSKU205, complete sequence.
type: Entry
definition: Spiroplasma kunkelii CR2-3x plasmid pSKU205, complete sequence.
sequence version: NZ_CP012424.1
sequence date: 2022-12-13
sequence: sequence
division: CON
label: NZ_CP012424.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03269975
keyword: RefSeq
source: Spiroplasma kunkelii CR2-3x
organism: Spiroplasma kunkelii CR2-3x
taxonomy: Bacteria; Mycoplasmatota; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.
reference: 1
references: 26494665
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP012424.1.\nAssembly method:SMRT Assembler v.2.3 Sequencing Technology:PacBio.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/12/2022 23:04:56\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,961\nCDSs (total) :: 1,922\nGenes (coding) :: 1,836\nCDSs (with protein) :: 1,836\nGenes (RNA) :: 39\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 33\nncRNAs :: 3\nPseudo Genes (total) :: 86\nCDSs (without protein) :: 86\nPseudo Genes (ambiguous residues) :: 0 of 86\nPseudo Genes (frameshifted) :: 41 of 86\nPseudo Genes (incomplete) :: 55 of 86\nPseudo Genes (internal stop) :: 46 of 86\nPseudo Genes (multiple problems) :: 45 of 86\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 20501
topology: circular
so has quality: SO_0000988
location: 1..20501
location: region:1-20501:1
RO_0002162: 273035

NZ_CP012424
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03269975
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequence of Spiroplasma kunkelii Strain CR2-3x, Causal Agent of Corn Stunt Disease in Zea mays L
author: Davis, R.E.
author: Shao, J.
author: Dally, E.L.
author: Zhao, Y.
author: Gasparich, G.E.
author: Gaynor, B.J.
author: Athey, J.C.
author: Harrison, N.A.
author: Donofrio, N.
journal: Genome Announc 3 (5), e01216-15 (2015)
pubmed: 26494665
comments: Publication Status: Online-Only

26494665
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Davis, R.E.
author: Shao, J.Y.
author: Dally, E.L.
author: Zhao, Y.
author: Gasparich, G.E.
author: Gaynor, B.J.
author: Athey, J.C.
author: Harrison, N.A.
author: Donofrio, N.
journal: Submitted (20-AUG-2015) USDA, United States Department of Agriculture, Molecular Plant Pathology Laboratory, 10300 Baltimore Ave., Beltsville, MD 20705, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20501:1
position: 20501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20501:1:source
so part of: sequence
organism: Spiroplasma kunkelii CR2-3x
mol type: genomic DNA
strain: CR2-3x
host: Zea mays L.
plasmid: pSKU205
country: Costa Rica
collection date: 2004

273035
type: Taxonomy
SIO_000068: taxonomy

SKUN_RS07995
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS07995
old locus tag: SKUN_001736
so part of: sequence
location: join(20233..20501,1..31)
location: region:1-20501:1
so has part: feature:20233-20501:1:exon
so has part: feature:1-31:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:20233-20501:1:exon

position:20233:1
position: 20233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-31:1:exon

position:31:1
position: 31
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SKUN_RS07995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS07995
old locus tag: SKUN_001736
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MPKIINTISSLKKIDNSNNDEKISDIEENINKLSSFKNVKEFKKRNWKNILPPMTCEVELVQKFRDEAKMKDWKYTTLMNKILRYWYDNRKGNNNNEDD
SIO_010081: SKUN_RS07995
subclass of: SO_0000673
so part of: SKUN_RS07995
location: join(20233..20501,1..31)
location: region:1-20501:1
so has part: feature:20233-20501:1:exon
so has part: feature:1-31:1:exon

WP_053391614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20233-20501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-31:1:exon

SKUN_RS09610
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS09610
old locus tag: SKUN_001737
so part of: sequence
location: 18..800
location: region:18-800:1
so has part: feature:18-800:1:exon
subclass of: SO_0000010

position:18:1
position: 18
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800:1
position: 800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18-800:1:exon

SKUN_RS09610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS09610
old locus tag: SKUN_001737
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: ParA family protein
translation: MKMISFCNKKGGVGKTTLCKNVAYKLALDGARVLLIDLDPQATLSVQLISKKGNNDNSIIELVSSKNAIKHIKIKTLSQETKHKNIDIITGNEELTNSNTIINTVFAVEQRYIIADMIYQSNQETFDGYDYVLIDYPPTIQELAINFLTISDIIIIPINAGNGSYKGLIDLKNTLNYVCRLNNRDLPGIKVIFNNIKDNENTSFIYKLLVKNDLANYLLNNIIKNSDTFIKTENELSSIWTNKHYWRQKQAYEELIKEIK
SIO_010081: SKUN_RS09610
subclass of: SO_0000673
so part of: SKUN_RS09610
location: 18..800
location: region:18-800:1
so has part: feature:18-800:1:exon

WP_053391615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18-800:1:exon

SKUN_RS09615
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS09615
old locus tag: SKUN_001738
so part of: sequence
location: 803..1108
location: region:803-1108:1
so has part: feature:803-1108:1:exon
subclass of: SO_0000010

position:803:1
position: 803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108:1
position: 1108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803-1108:1:exon

SKUN_RS09615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS09615
old locus tag: SKUN_001738
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKLDENICIAPHCEKITLLVMPAISICGEHEKQFMEYIDNLPFIPELNEILETDKEAHFQFILANLTNFFEKLEKEWNRKNKYKIKKKKSKKVNVKKKKRK
SIO_010081: SKUN_RS09615
subclass of: SO_0000673
so part of: SKUN_RS09615
location: 803..1108
location: region:803-1108:1
so has part: feature:803-1108:1:exon

WP_053391603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:803-1108:1:exon

SKUN_RS09970
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS09970
old locus tag: SKUN_001739
so part of: sequence
location: 1120..1272
location: region:1120-1272:1
so has part: feature:1120-1272:1:exon
subclass of: SO_0000010

position:1120:1
position: 1120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272:1
position: 1272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120-1272:1:exon

SKUN_RS09970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS09970
old locus tag: SKUN_001739
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004028791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKIDNKDTINHNLMIVDIDLQKCLNCNFMIQKIHDEWFTINTGDKNCEK
SIO_010081: SKUN_RS09970
subclass of: SO_0000673
so part of: SKUN_RS09970
location: 1120..1272
location: region:1120-1272:1
so has part: feature:1120-1272:1:exon

WP_200903037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1120-1272:1:exon

SKUN_RS09620
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS09620
old locus tag: SKUN_001740
so part of: sequence
location: complement(2060..5818)
location: region:2060-5818:-1
so has part: feature:2060-5818:-1:exon
subclass of: SO_0000010

position:2060:-1
position: 2060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5818:-1
position: 5818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060-5818:-1:exon

SKUN_RS09620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS09620
old locus tag: SKUN_001740
inference: COORDINATES: protein motif:HMM:NF038029.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: lipoprotein
translation: MKKLLSILSAVSLTVTGASSIVACKKPEKTKDINKQTNKQNLSKLITTPNLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATVTGATNKYTGTVKLSYTKKVVLSPLNSFITETDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATVTGVTNKYTGTVKLSYTKKVVLSPLNSFITETDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATVTGATNKYTGTVKLSYTKKVVLSPLNSFITETDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATVTGATNKYTGTVKLSYTKKVVLSPLNSFITETDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATLTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDEIETAIKAKNTNYQNGDVTFSEIKATEATVTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATVTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATVTGVTNKYTGTVKLSYTKKVVLSPLNSFITETDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATVTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFTEIKVTEATVTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATVTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFSEIKATEATLTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDELETAIKAKNTKYQNGDVTFTEIKVTEATVTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFTEIKVTEATVTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDELETAIKAKNTNYQNGDVTFTEIKVTEATVTGATNKYTGTVKLSYTKKVVLSPLNSVITTPDLGDITMASATPTTDELETAIKAKNTKYQNGDVTFSEIKATEATVTGATNKYTGTVKLSYTKS
SIO_010081: SKUN_RS09620
subclass of: SO_0000673
so part of: SKUN_RS09620
location: complement(2060..5818)
location: region:2060-5818:-1
so has part: feature:2060-5818:-1:exon

WP_053391604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060-5818:-1:exon

SKUN_RS08015
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS08015
old locus tag: SKUN_001741
so part of: sequence
location: 5984..6169
location: region:5984-6169:1
so has part: feature:5984-6169:1:exon
subclass of: SO_0000010

position:5984:1
position: 5984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6169:1
position: 6169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5984-6169:1:exon

SKUN_RS08015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS08015
old locus tag: SKUN_001741
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKLLNILSILTITIGAAMPNVSTVSSYQKQQKKEYSQDKINYEFFLNEPNKIFFTFSQKR
SIO_010081: SKUN_RS08015
subclass of: SO_0000673
so part of: SKUN_RS08015
location: 5984..6169
location: region:5984-6169:1
so has part: feature:5984-6169:1:exon

WP_053391605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5984-6169:1:exon

SKUN_RS08020
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS08020
old locus tag: SKUN_001742
so part of: sequence
location: complement(7650..8303)
location: region:7650-8303:-1
so has part: feature:7650-8303:-1:exon
subclass of: SO_0000010

position:7650:-1
position: 7650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8303:-1
position: 8303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7650-8303:-1:exon

SKUN_RS08020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS08020
old locus tag: SKUN_001742
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQQLQQTEQKKYHFVKINGLEYKVINQLDDKKHISNFYLPKKIVRQHPTHKDSYKIKIYDKFICVPKKMCFLDKTGKYFLVGLDMFFTYWIYNTQDNNKYRLAGYQAIRDTAIKELHYLTVSARRYEKEQATNPFLSGLTYQQARKQICAESNKLKAEYQTFIKNKYSANKKLLIKYKENYSLIDNFNTHYKKNKGEPPEMSEEELKQLLVELDNLD
SIO_010081: SKUN_RS08020
subclass of: SO_0000673
so part of: SKUN_RS08020
location: complement(7650..8303)
location: region:7650-8303:-1
so has part: feature:7650-8303:-1:exon

WP_053391606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7650-8303:-1:exon

SKUN_RS08025
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS08025
old locus tag: SKUN_001743
so part of: sequence
location: complement(9144..11027)
location: region:9144-11027:-1
so has part: feature:9144-11027:-1:exon
subclass of: SO_0000010

position:9144:-1
position: 9144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11027:-1
position: 11027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9144-11027:-1:exon

SKUN_RS08025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS08025
old locus tag: SKUN_001743
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKLLSLLSVLTISWAAMSNIIAISSYEYHKRQAPPSLQELITTINIGEIEINDQEHIIARLREINHPILSRPDFLENMVVEDITRTSAIIHARENIQSNTHPIPSNINFTLNFTTQRPRLSTVITNINLGNIINNSFFNVFNSVIRLNPQIYDLYQSISLSIFDITTNSAIIRNENTLETVTVNFNTNYYSLESLLTVTDLGEIPDNLPGTILNEILKLNPNIDISYIRSIFNITTNSVIIEGNLPSSTYNDRGDDGYYNIWHDTVNVSFSLKQENIYATLKPIENHSTTPENIYATLKPIENHSTTPENIYATLKPIENHSTTPENIYATLKPIENHSTTPENKSTKETLITNQKIFDKFNNLSKKQKQKKLNEINQHYQNLSKNDKTMFKKKLEILGTSLIGGGISAIGTKIIIGSGGTNSAITAEETELTPLLSASTTENLVVAETVTAVETVAVEGTVIGAETTTSLALAPETLGLSLVIGGLIIAGTSIIWWINSSTNITTKHESNNQYNEIEKYYKFLAHDQLKLGIDNSKWNKIKEIYQENTNNYKEFKNKVKLIISNFHKENHSGWHELITNDDINILIKVMYNNFQKLNNHFSSSSNNQGWKVVTNTVGSYFKIEQE
SIO_010081: SKUN_RS08025
subclass of: SO_0000673
so part of: SKUN_RS08025
location: complement(9144..11027)
location: region:9144-11027:-1
so has part: feature:9144-11027:-1:exon

WP_053391607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9144-11027:-1:exon

SKUN_RS08030
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS08030
old locus tag: SKUN_001744
so part of: sequence
location: complement(11488..11709)
location: region:11488-11709:-1
so has part: feature:11488-11709:-1:exon
subclass of: SO_0000010

position:11488:-1
position: 11488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11709:-1
position: 11709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11488-11709:-1:exon

SKUN_RS08030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS08030
old locus tag: SKUN_001744
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLKLKNVLLKNNSSFDSFSQVKKLVSYFNKKEYKQRPHQLKIPTMKCKKMVEAFKKESQNKRQNKTIKSTSKY
SIO_010081: SKUN_RS08030
subclass of: SO_0000673
so part of: SKUN_RS08030
location: complement(11488..11709)
location: region:11488-11709:-1
so has part: feature:11488-11709:-1:exon

WP_053391608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11488-11709:-1:exon

SKUN_RS08035
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS08035
old locus tag: SKUN_001745
so part of: sequence
location: complement(11930..12262)
location: region:11930-12262:-1
so has part: feature:11930-12262:-1:exon
subclass of: SO_0000010

position:11930:-1
position: 11930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12262:-1
position: 12262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11930-12262:-1:exon

SKUN_RS08035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS08035
old locus tag: SKUN_001745
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKLLSILTITGAAMPNVIAVSSYQKQQKKEYSQDKINYEFFLNEPNKIFFTFSEKRWKEIKDNEIELYNNHIRNKYLMNLIVTYNFLIFYLVFNNQILRNNIANVRFLF
SIO_010081: SKUN_RS08035
subclass of: SO_0000673
so part of: SKUN_RS08035
location: complement(11930..12262)
location: region:11930-12262:-1
so has part: feature:11930-12262:-1:exon

WP_053391609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11930-12262:-1:exon

SKUN_RS08040
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS08040
old locus tag: SKUN_001746
so part of: sequence
location: complement(12643..12972)
location: region:12643-12972:-1
so has part: feature:12643-12972:-1:exon
subclass of: SO_0000010

position:12643:-1
position: 12643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12972:-1
position: 12972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12643-12972:-1:exon

SKUN_RS08040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS08040
old locus tag: SKUN_001746
inference: COORDINATES: protein motif:HMM:NF025001.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: ParA family protein
translation: MSIIIFFFNIKITIYYDYVLLDYPPTVNELSLNFLLISDLILIPINEGLEAFKGILDLTNTLKFICEKEKRKVLKYKILLNNIKSDKNLILINEWLDEKGFWMFVIKQY
SIO_010081: SKUN_RS08040
subclass of: SO_0000673
so part of: SKUN_RS08040
location: complement(12643..12972)
location: region:12643-12972:-1
so has part: feature:12643-12972:-1:exon

WP_158500836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12643-12972:-1:exon

SKUN_RS09625
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS09625
so part of: sequence
location: complement(14119..14277)
location: region:14119-14277:-1
so has part: feature:14119-14277:-1:exon
subclass of: SO_0000010

position:14119:-1
position: 14119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14277:-1
position: 14277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14119-14277:-1:exon

SKUN_RS09625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS09625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MFDLNWNAVIFLKYEYDEFYWLWLYYRNGKNQINTIGAYPTQHTYEIWNNKE
SIO_010081: SKUN_RS09625
subclass of: SO_0000673
so part of: SKUN_RS09625
location: complement(14119..14277)
location: region:14119-14277:-1
so has part: feature:14119-14277:-1:exon

WP_158500837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14119-14277:-1:exon

SKUN_RS08045
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS08045
old locus tag: SKUN_001747
so part of: sequence
location: complement(14899..15243)
location: region:14899-15243:-1
so has part: feature:14899-15243:-1:exon
subclass of: SO_0000010

position:14899:-1
position: 14899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15243:-1
position: 15243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14899-15243:-1:exon

SKUN_RS08045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS08045
old locus tag: SKUN_001747
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MRRASYIDTKIDYDQNDVQKDQRKEKQWKIENHPGRLALKQWEKHWKSAWFENLTKEKQKKYKLITNKLALDKKKFELVKIHQEWKRNWYNNLDKEKQREYKKGVEKIKKEHNL
SIO_010081: SKUN_RS08045
subclass of: SO_0000673
so part of: SKUN_RS08045
location: complement(14899..15243)
location: region:14899-15243:-1
so has part: feature:14899-15243:-1:exon

WP_053391611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14899-15243:-1:exon

SKUN_RS11525
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS11525
so part of: sequence
location: 15925..16047
location: region:15925-16047:1
so has part: feature:15925-16047:1:exon
subclass of: SO_0000010

position:15925:1
position: 15925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16047:1
position: 16047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15925-16047:1:exon

SKUN_RS11525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS11525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MTITESIKFDKLQEENETVKKGLKELKKQFEQLTIIGKDK
SIO_010081: SKUN_RS11525
subclass of: SO_0000673
so part of: SKUN_RS11525
location: 15925..16047
location: region:15925-16047:1
so has part: feature:15925-16047:1:exon

WP_268794902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15925-16047:1:exon

SKUN_RS08050
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS08050
so part of: sequence
location: 16251..16526
location: region:16251-16526:1
so has part: feature:16251-16526:1:exon
subclass of: SO_0000010

position:16251:1
position: 16251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16526:1
position: 16526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16251-16526:1:exon

SKUN_RS08050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS08050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MCFLDKTGKYFLIGIDMFFTYWIYNTSDNNKYRLAGYQAIRDTAIKELHYLTVSARRYEKEQATNPFLSGLTYQQARKQICAESNKLKAEY
SIO_010081: SKUN_RS08050
subclass of: SO_0000673
so part of: SKUN_RS08050
location: 16251..16526
location: region:16251-16526:1
so has part: feature:16251-16526:1:exon

WP_053391612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16251-16526:1:exon

SKUN_RS11530
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS11530
old locus tag: SKUN_001749
so part of: sequence
location: 17351..17485
location: region:17351-17485:1
so has part: feature:17351-17485:1:exon
subclass of: SO_0000010

position:17351:1
position: 17351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17485:1
position: 17485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17351-17485:1:exon

SKUN_RS11530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS11530
old locus tag: SKUN_001749
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MAVLVNKKMITANKLTRKNIYVLTHKGNSFLGREHKKSIKINFY
SIO_010081: SKUN_RS11530
subclass of: SO_0000673
so part of: SKUN_RS11530
location: 17351..17485
location: region:17351-17485:1
so has part: feature:17351-17485:1:exon

WP_268794903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17351-17485:1:exon

SKUN_RS09630
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS09630
so part of: sequence
location: 18291..18449
location: region:18291-18449:1
so has part: feature:18291-18449:1:exon
subclass of: SO_0000010

position:18291:1
position: 18291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18449:1
position: 18449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18291-18449:1:exon

SKUN_RS09630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS09630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MFDLNWNAVIFLKYEYDEFYWLWLYYRNGKNQINTIGAYPTQHTYEIWNNKE
SIO_010081: SKUN_RS09630
subclass of: SO_0000673
so part of: SKUN_RS09630
location: 18291..18449
location: region:18291-18449:1
so has part: feature:18291-18449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18291-18449:1:exon

SKUN_RS09635
type: Gene
subclass of: SO_0000704
RO_0002162: 273035
locus tag: SKUN_RS09635
old locus tag: SKUN_001751
so part of: sequence
location: complement(19790..19945)
location: region:19790-19945:-1
so has part: feature:19790-19945:-1:exon
subclass of: SO_0000010

position:19790:-1
position: 19790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19945:-1
position: 19945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19790-19945:-1:exon

SKUN_RS09635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 273035
locus tag: SKUN_RS09635
old locus tag: SKUN_001751
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MTYNTVNIIDFIDKFFENKKENSNVQNKEHINNLKIKVQWDSGKMTYIEKL
SIO_010081: SKUN_RS09635
subclass of: SO_0000673
so part of: SKUN_RS09635
location: complement(19790..19945)
location: region:19790-19945:-1
so has part: feature:19790-19945:-1:exon

WP_158500838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19790-19945:-1:exon