Saccharomyces paradoxus chromosome VIII, complete sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.
Contrasting evolutionary genome dynamics between domesticated and wild yeasts
Population-level Yeast Reference Genomes
Submitted (28-APR-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (20-JAN-2020) Biotechnology, Delft University of Technology, van der Maasweg 9, Delft, Netherlands 2629 HZ, Netherlands
Submitted (04-FEB-2017) Institute for Research on Cancer and Aging, Nice (IRCAN), Institute for Research on Cancer and Aging, Nice (IRCAN), 28 Avenue de Valombrose, Nice, PACA 06107, France
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP020249.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 29-JAN-2017\nAssembly Method :: HGAP v. 2.3.0\nAssembly Name :: S. paradoxus CBS432 PacBio Assembly\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 112.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
culture from neotype of Saccharomyces paradoxus
integral membrane protein; similar to YHL044W
ARN family transporter for siderophore-iron chelates; similar to YHL040C
Lysine methyltransferase; similar to YHL039W
Required for splicing of the group I intron bI5 of the COB pre-mRNA; similar to YHL038C
Low affinity methionine permease; similar to YHL036W
Vacuolar membrane protein; similar to YHL035C
Protein that binds eIF4G and has a role in repression of translation; similar to YHL034C
Ribosomal 60S subunit protein L8A; similar to YHL033C
v-SNARE protein involved in Golgi transport; similar to YHL031C
Cytoplasmic protein required for replication of Brome mosaic virus; similar to YHL029C
Cys2His2 zinc-finger transcriptional repressor; similar to YHL027W
Subunit of the SWI/SNF chromatin remodeling complex; similar to YHL025W
Subunit of SEA (Seh1-associated), Npr2/3, and Iml1p complexes; similar to YHL023C
Meiosis-specific protein that initiates meiotic recombination; similar to YHL022C
Transcriptional regulator of a variety of genes; similar to YHL020C
4a-hydroxytetrahydrobiopterin dehydratase; similar to YHL018W
Plasma membrane transporter for both urea and polyamines; similar to YHL016C
Protein component of the small (40S) ribosomal subunit; similar to YHL015W
UTP glucose-1-phosphate uridylyltransferase; similar to YHL012W
5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; similar to YHL011C
Basic leucine zipper (bZIP) transcription factor; similar to YHL009C
Cdc42p-activated signal transducing kinase; similar to YHL007C
Component of Shu complex (aka PCSS complex); similar to YHL006C
Mitochondrial ribosomal protein of the small subunit; similar to YHL004W
Ceramide synthase component; similar to YHL003C
Subunit of the endosomal Vps27p-Hse1p complex; similar to YHL002W
Ribosomal 60S subunit protein L14B; similar to YHL001W
Oxysterol-binding protein; similar to YHR001W
Mitochondrial carrier protein; similar to YHR002W
tRNA threonylcarbamoyladenosine dehydratase; similar to YHR003C
Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme; similar to YHR004C
Subunit of the G protein involved in pheromone response; similar to YHR005C
Transcription factor; similar to YHR006W
Lanosterol 14-alpha-demethylase; similar to YHR007C
Mitochondrial manganese superoxide dismutase; similar to YHR008C
oxidoreductase involved in late endosome to Golgi transport; similar to YHR009C
Ribosomal 60S subunit protein L27A; similar to YHR010W
Probable mitochondrial seryl-tRNA synthetase; similar to YHR011W
Subunit of the membrane-associated retromer complex; similar to YHR012W
Subunit of protein N-terminal acetyltransferase NatA; similar to YHR013C
Actin-binding protein; similar to YHR016C
Argininosuccinate lyase; similar to YHR018C
Cytosolic asparaginyl-tRNA synthetase; similar to YHR019C
Prolyl-tRNA synthetase; similar to YHR020W
Protein component of the small (40S) ribosomal subunit; similar to YHR021C
Type II myosin heavy chain; similar to YHR023W
Alpha subunit of the mitochondrial processing protease (MPP); similar to YHR024C
Subunit c'' of the vacuolar ATPase; similar to YHR026W
Non-ATPase base subunit of the 19S RP of the 26S proteasome; similar to YHR027C
Dipeptidyl aminopeptidase; similar to YHR028C
Serine/threonine MAP kinase; similar to YHR030C
DNA helicase involved in rDNA replication and Ty1 transposition; similar to YHR031C
Member of the multi-drug and toxin extrusion (MATE) family; similar to YHR032W
Component of the conserved R2TP complex (Rvb1-Rvb2-Tah1-Pih1); similar to YHR034C
Activator of Sar1p GTPase activity; similar to YHR035W
Essential nuclear envelope integral membrane protein; similar to YHR036W
Delta-1-pyrroline-5-carboxylate dehydrogenase; similar to YHR037W
Mitochondrial ribosome recycling factor; similar to YHR038W
Essential protein required for the accumulation of box C/D snoRNA; similar to YHR040W
Subunit of the RNA polymerase II mediator complex; similar to YHR041C
NADP-cytochrome P450 reductase; similar to YHR042W
2-deoxyglucose-6-phosphate phosphatase; similar to YHR043C
2-deoxyglucose-6-phosphate phosphatase; similar to YHR044C
Inositol monophosphatase; similar to YHR046C
Arginine/alanine amino peptidase; similar to YHR047C
Presumed antiporter of the major facilitator superfamily; similar to YHR048W
Divalent metal ion transporter involved in manganese homeostasis; similar to YHR050W
Subunit VI of cytochrome c oxidase (Complex IV); similar to YHR051W
Essential protein that interacts with proteasome components; similar to YHR052W
Component of the RSC chromatin remodeling complex; similar to YHR056C
Peptidyl-prolyl cis-trans isomerase (cyclophilin); similar to YHR057C
Subunit of the RNA polymerase II mediator complex; similar to YHR058C
Protein that is required for vacuolar H+-ATPase (V-ATPase) function; similar to YHR060W
Protein involved in initiation of budding and cellular polarization; similar to YHR061C
Subunit of both RNase MRP and nuclear RNase P; similar to YHR062C
2-dehydropantoate 2-reductase; similar to YHR063C
Hsp70 protein that interacts with Zuo1p (DnaJ-like); similar to YHR064C
Protein involved in rRNA processing; similar to YHR065C
Constituent of 66S pre-ribosomal particles; similar to YHR066W
Mitochondrial 3-hydroxyacyl-thioester dehydratase; similar to YHR067W
Deoxyhypusine synthase; similar to YHR068W
Exosome non-catalytic core component; similar to YHR069C
tRNA(m(1)G37)methyltransferase; similar to YHR070W
Member of an oxysterol-binding protein family; similar to YHR073W
Glutamine-dependent NAD(+) synthetase; similar to YHR074W
Protein with carboxyl methyl esterase activity; similar to YHR075C
Type 2C serine/threonine protein phosphatase (PP2C); similar to YHR076W
Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; similar to YHR077C
High osmolarity-regulated gene of unknown function; similar to YHR078W
Serine-threonine kinase and endoribonuclease; similar to YHR079C
Nuclear exosome-associated nucleic acid binding protein; similar to YHR081W
Serine/threonine protein kinase; similar to YHR082C
Component of the sorting and assembly machinery (SAM) complex; similar to YHR083W
Transcription factor that is activated by a MAPK signaling cascade; similar to YHR084W
Component of the Rix1 complex; similar to YHR085W
RNA binding protein, component of the U1 snRNP protein; similar to YHR086W
Protein involved in assembly and export of the large ribosomal subunit; similar to YHR088W
Protein component of the H/ACA snoRNP pseudouridylase complex; similar to YHR089C
Subunit of NuA4, an essential histone acetyltransferase complex; similar to YHR090C
Mitochondrial arginyl-tRNA synthetase; similar to YHR091C
High-affinity glucose transporter; similar to YHR092C
Low-affinity glucose transporter of the major facilitator superfamily; similar to YHR094C
Hexose transporter with moderate affinity for glucose; similar to YHR096C
Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat; similar to YHR098C
Subunit of SAGA and NuA4 histone acetyltransferase complexes; similar to YHR099W
Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase); similar to YHR100C
Integral membrane protein of the endoplasmic reticulum; similar to YHR101C
Protein kinase of the PAK/Ste20 family, required for cell integrity; similar to YHR102W
Protein involved in bud growth; similar to YHR103W
Mitochondrial thioredoxin reductase; similar to YHR106W
Component of the septin ring that is required for cytokinesis; similar to YHR107C
Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking; similar to YHR108W
Cytochrome c lysine methyltransferase; similar to YHR109W
Protein with similarity to Emp24p and Erv25p; similar to YHR110W
E1-like protein that activates Urm1p before urmylation; similar to YHR111W
Cytoplasmic aspartyl aminopeptidase with possible vacuole function; similar to YHR113W
SH3 domain protein implicated in regulating actin polymerization; similar to YHR114W
Ubiquitin-protein ligase (E3); similar to YHR115C
Protein that functions in mitochondrial copper homeostasis; similar to YHR116W
Mitochondrial outer membrane protein; similar to YHR117W
Subunit of the origin recognition complex (ORC); similar to YHR118C
Histone methyltransferase, subunit of the COMPASS (Set1C) complex; similar to YHR119W
DNA-binding protein of the mitochondria; similar to YHR120W
Component of cytosolic iron-sulfur protein assembly (CIA) machinery; similar to YHR122W
sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase; similar to YHR123W
Meiosis-specific transcription factor; similar to YHR124W
Uracil phosphoribosyltransferase; similar to YHR128W
Actin-related protein of the dynactin complex; similar to YHR129C
metalloprotease with similarity to zinc carboxypeptidases; similar to YHR132C
Protein involved in regulation of sterol biosynthesis; similar to YHR133C
Metalloprotease involved in DNA repair, removes DNA-protein crosslink; similar to YHR134W
Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform; similar to YHR135C
Protein with similarity to cyclin-dependent kinase inhibitors; similar to YHR136C
Aromatic aminotransferase II; similar to YHR137W
Protein required for spore wall maturation; similar to YHR139C
Daughter cell-specific secreted protein with similarity to glucanases; similar to YHR143W
Deoxycytidine monophosphate (dCMP) deaminase; similar to YHR144C
Protein that binds to cruciform DNA structures; similar to YHR146W
Mitochondrial ribosomal protein of the large subunit; similar to YHR147C
Component of the SSU processome; similar to YHR148W
Integral membrane protein; similar to YHR149C
Peroxisomal integral membrane peroxin; similar to YHR150W
Meiosis-specific protein involved in synaptonemal complex assembly; similar to YHR153C
Protein implicated in Mms22-dependent DNA repair during S phase; similar to YHR154W
Mitochondrial protein; similar to YHR155W
Non-essential component of U5 snRNP; similar to YHR156C
Protein involved in early stages of meiotic recombination; similar to YHR157W
Protein required for proper cell fusion and cell morphology; similar to YHR158C
Protein of the AP180 family, involved in clathrin cage assembly; similar to YHR161C
subunit of the mitochondrial pyruvate carrier; similar to YHR162W
6-phosphogluconolactonase; similar to YHR163W
Tripartite DNA replication factor; similar to YHR164C
Component of U4/U6-U5 snRNP complex; similar to YHR165C
Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); similar to YHR166C
Subunit of the THO and TREX complexes; similar to YHR167W
ATPase, RNA helicase of the DEAD-box family; similar to YHR169W
Protein involved in nuclear export of the large ribosomal subunit; similar to YHR170W
Autophagy-related protein and dual specificity member of the E1 family; similar to YHR171W
Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; similar to YHR172W
Enolase II, a phosphopyruvate hydratase; similar to YHR174W
low-affinity copper transporter of the vacuolar membrane; similar to YHR175W
Flavin-containing monooxygenase; similar to YHR176W
transcription factor containing a WOPR domain; similar to YHR177W
Transcription factor; similar to YHR178W
Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN); similar to YHR179W
Integral membrane protein of the early Golgi apparatus and ER; similar to YHR181W
6-phosphogluconate dehydrogenase (decarboxylating); similar to YHR183W
Protein involved in the control of meiotic nuclear division; similar to YHR184W
Sporulation protein required for prospore membrane formation; similar to YHR185C
Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex; similar to YHR187W
Subunit of the glycosylphosphatidylinositol transamidase complex; similar to YHR188C
One of two mitochondrially-localized peptidyl-tRNA hydrolases; similar to YHR189W
Farnesyl-diphosphate farnesyl transferase (squalene synthase); similar to YHR190W
Subunit of a complex with Ctf18p; similar to YHR191C
Lunapark family member involved in ER network formation; similar to YHR192W
Alpha subunit of the nascent polypeptide-associated complex (NAC); similar to YHR193C
Mitochondrial protein that may have a role in phospholipid metabolism; similar to YHR194W
Nuclear envelope protein; similar to YHR195W
Component of the Rix1 complex; similar to YHR197W
Non-ATPase base subunit of the 19S RP of the 26S proteasome; similar to YHR200W
Protein component of the small (40S) ribosomal subunit; similar to YHR203C
Alpha-1,2-specific exomannosidase of the endoplasmic reticulum; similar to YHR204W
AGC family protein kinase; similar to YHR205W
Nuclear response regulator and transcription factor; similar to YHR206W
Methyltransferase involved in methylation of histone H4 Lys5, -8, -12; similar to YHR207C
Mitochondrial branched-chain amino acid (BCAA) aminotransferase; similar to YHR208W
S-AdoMet-dependent methyltransferase involved in lipid homeostasis; similar to YHR209W
aldose 1-epimerase superfamily protein; similar to YHR210C
One of three repressible acid phosphatases; similar to YAR071W
Inosine monophosphate dehydrogenase; similar to YHR216W