Saccharomyces paradoxus chromosome VI, complete sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.
Contrasting evolutionary genome dynamics between domesticated and wild yeasts
Population-level Yeast Reference Genomes
Submitted (28-APR-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (20-JAN-2020) Biotechnology, Delft University of Technology, van der Maasweg 9, Delft, Netherlands 2629 HZ, Netherlands
Submitted (04-FEB-2017) Institute for Research on Cancer and Aging, Nice (IRCAN), Institute for Research on Cancer and Aging, Nice (IRCAN), 28 Avenue de Valombrose, Nice, PACA 06107, France
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP020247.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 29-JAN-2017\nAssembly Method :: HGAP v. 2.3.0\nAssembly Name :: S. paradoxus CBS432 PacBio Assembly\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 112.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
culture from neotype of Saccharomyces paradoxus
Protein involved in synthesis of the thiamine precursor HMP; similar to YNL332W
Low-affinity amino acid permease; similar to YFL055W
channel-like protein; similar to YFL054C
Dihydroxyacetone kinase; similar to YFL053W
zinc cluster protein that contains a DNA binding domain; similar to YFL052W
Permease of basic amino acids in the vacuolar membrane; similar to YCL069W
Probable Mg(2+) transporter; similar to YFL050C
Member of the SWI/SNF chromatin remodeling complex; similar to YFL049W
Integral membrane component of ER-derived COPII-coated vesicles; similar to YFL048C
GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p; similar to YFL047W
assembly factor for cytochrome c oxidase; similar to YFL046W
Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p; similar to YFL044C
Mitochondrial RNA polymerase; similar to YFL036W
integral membrane protein that interacts with Rpp0p; similar to YFL034W
Protein kinase involved in cell proliferation in response to nutrients; similar to YFL033C
Basic leucine zipper (bZIP) transcription factor (ATF/CREB1-like protein); similar to YFL031W
Alanine:glyoxylate aminotransferase (AGT); similar to YFL030W
Cyclin-dependent kinase-activating kinase; similar to YFL029C
member of evolutionarily-conserved CCR4-NOT regulatory complex; similar to YFL028C
GTPase-activating protein for Rab family members; similar to YFL027C
Receptor for alpha-factor pheromone; similar to YFL026W
GPI inositol deacylase of the endoplasmic reticulum (ER); similar to YFL025C
Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex; similar to YFL024C
Unconventional prefoldin protein involved in translation initiation; similar to YFL023W
Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase; similar to YFL022C
Transcriptional activator of nitrogen catabolite repression genes; similar to YFL021W
Member of the seripauperin multigene family; similar to YNR076W
Dihydrolipoamide dehydrogenase; similar to YFL018C
Glucosamine-6-phosphate acetyltransferase; similar to YFL017C
Co-chaperone that stimulates HSP70 protein Ssc1p ATPase activity; similar to YFL016C
Plasma membrane protein involved in maintaining membrane organization; similar to YFL014W
Subunit of the INO80 chromatin remodeling complex; similar to YFL013C
F-box protein required for both the G1/S and G2/M phase transitions; similar to YFL009W
Subunit of the multiprotein cohesin complex; similar to YFL008W
Proteasome activator; similar to YFL007W
Subunit of vacuolar transporter chaperone (VTC) complex; similar to YFL004W
Protein involved in meiotic recombination; similar to YFL003C
ATP-dependent RNA helicase; similar to YFL002C
tRNA:pseudouridine synthase; similar to YFL001W
Nuclear protein involved in asymmetric localization of ASH1 mRNA; similar to YFR001W
Linker nucleoporin component of the nuclear pore complex (NPC); similar to YFR002W
Regulatory subunit of the type I protein phosphatase (PP1) Glc7p; similar to YFR003C
Metalloprotease subunit of 19S regulatory particle; similar to YFR004W
Conserved zinc-finger domain protein involved in pre-mRNA splicing; similar to YFR005C
X-Pro aminopeptidase; similar to YFR006W
kinase with similarity to the PRK/URK/PANK kinase subfamily; similar to YFR007W
Protein involved in recovery from pheromone-induced cell cycle arrest; similar to YFR008W
Positive regulator of the Gcn2p kinase activity; similar to YFR009W
Ubiquitin-specific protease; similar to YFR010W
Component of the MICOS complex; similar to YFR011C
Subunit of the Isw1a complex; similar to YFR013W
Calmodulin-dependent protein kinase; similar to YFR014C
Cytoplasmic protein that inhibits Gdb1p glycogen debranching activity; similar to YFR017C
1-phosphatidylinositol-3-phosphate 5-kinase; similar to YFR019W
Phosphoinositide binding protein; similar to YFR021W
Alpha-arrestin involved in ubiquitin-dependent endocytosis; similar to YFR022W
Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation; similar to YFR023W
Histidinolphosphatase; similar to YFR025C
Protein phosphatase required for mitotic exit; similar to YFR028C
Component of the SPS plasma membrane amino acid sensor system; similar to YFR029W
Subunit alpha of assimilatory sulfite reductase; similar to YFR030W
Subunit of the condensin complex; similar to YFR031C
Subunit 6 of the ubiquinol cytochrome-c reductase complex; similar to YFR033C
Basic helix-loop-helix (bHLH) transcription factor of the myc-family; similar to YFR034C
Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); similar to YFR036W
Component of the RSC chromatin remodeling complex; similar to YFR037C
ATPase containing the DEAD/H helicase-related sequence motif; similar to YFR038W
Protein involved in outer spore wall assembly; similar to YFR039C
Protein required for function of the Sit4p protein phosphatase; similar to YFR040W
Type I membrane protein with a J domain; similar to YFR041C
Integral membrane protein of the ER; similar to YFR042W
Cys-Gly metallo-di-peptidase; similar to YFR044C
mitochondrial transport protein; similar to YFR045W
Quinolinate phosphoribosyl transferase; similar to YFR047C
Cytosolic protein required for sporulation; similar to YFR048W
Subunit of the mitochondrial alpha-ketoglutarate dehydrogenase; similar to YFR049W
Beta 7 subunit of the 20S proteasome; similar to YFR050C
Delta subunit of the coatomer complex (COPI); similar to YFR051C
Subunit of the 19S regulatory particle of the 26S proteasome lid; similar to YFR052W
Hexokinase isoenzyme 1; similar to YFR053C
Beta-lyase involved in the production of thiols; similar to YFR055W