Saccharomyces paradoxus chromosome I, complete sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.
Contrasting evolutionary genome dynamics between domesticated and wild yeasts
Population-level Yeast Reference Genomes
Submitted (28-APR-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (20-JAN-2020) Biotechnology, Delft University of Technology, van der Maasweg 9, Delft, Netherlands 2629 HZ, Netherlands
Submitted (04-FEB-2017) Institute for Research on Cancer and Aging, Nice (IRCAN), Institute for Research on Cancer and Aging, Nice (IRCAN), 28 Avenue de Valombrose, Nice, PACA 06107, France
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP020242.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 29-JAN-2017\nAssembly Method :: HGAP v. 2.3.0\nAssembly Name :: S. paradoxus CBS432 PacBio Assembly\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 112.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
culture from neotype of Saccharomyces paradoxus
Lectin-like protein with similarity to Flo1p; similar to YAL063C
NADP(+)-dependent glutamate dehydrogenase; similar to YAL062W
medium-chain alcohol dehydrogenase with similarity to BDH1; similar to YAL061W
NAD-dependent (R,R)-butanediol dehydrogenase; similar to YAL060W
Pre-ribosomal factor involved in 60S ribosomal protein subunit export; similar to YAL059W
Multistep regulator of cAMP-PKA signaling; similar to YAL056W
peroxisomal membrane protein; similar to YAL055W
Acetyl-coA synthetase isoform; similar to YAL054C
Oleate-activated transcription factor; similar to YAL051W
Cytoplasmic protein involved in mitochondrial function or organization; similar to YAL049C
Outer mitochondrial membrane GTPase, subunit of the ERMES complex; similar to YAL048C
Component of the cytoplasmic Tub4p (gamma-tubulin) complex; similar to YAL047C
Protein involved in mitochondrial function or organization; similar to YAL046C
H subunit of the mitochondrial glycine decarboxylase complex; similar to YAL044C
Protein localized to COPII-coated vesicles; similar to YAL042W
Guanine nucleotide exchange factor for Cdc42p; similar to YAL041W
G1 cyclin involved in cell cycle progression; similar to YAL040C
Cytochrome c heme lyase (holocytochrome c synthase); similar to YAL039C
Member of the DRG family of GTP-binding proteins; similar to YAL036C
Translation initiation factor eIF5B; similar to YAL035W
Subunit of both RNase MRP and nuclear RNase P; similar to YAL033W
Protein required for pre-mRNA splicing; similar to YAL032C
Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; similar to YAL031C
Vesicle membrane receptor protein (v-SNARE); similar to YAL030W
Type V myosin motor involved in actin-based transport of cargos; similar to YAL029C
5'- and 3'-flap DNA binding protein; similar to YAL027W
Trans-golgi network aminophospholipid translocase (flippase); similar to YAL026C
Essential nuclear protein; similar to YAL025C
Protein similar to GDP/GTP exchange factors; similar to YAL024C
Protein O-mannosyltransferase of the ER membrane; similar to YAL023C
High affinity, broad selectivity, nucleoside/nucleobase transporter; similar to YAL022C
Component of the CCR4-NOT transcriptional complex; similar to YAL021C
Protein required for modification of wobble nucleosides in tRNA; similar to YAL020C
Snf2p family member with ATP-dependent chromatin remodeling activity; similar to YAL019W
Protein Involved in spore wall assembly; similar to YAL018C
PAS domain-containing serine/threonine protein kinase; similar to YAL017W
Regulatory subunit A of the heterotrimeric PP2A complex; similar to YAL016W
DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase; similar to YAL015C
Endosomal SNARE related to mammalian syntaxin 8; similar to YAL014C
Component of the Rpd3L histone deacetylase complex; similar to YAL013W
Cystathionine gamma-lyase; similar to YAL012W
Subunit of both the ERMES and the SAM complex; similar to YAL010C
regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme; similar to YAL009W
Member of the p24 family involved in ER to Golgi transport; similar to YAL007C
ATPase involved in protein folding and NLS-directed nuclear transport; similar to YAL005C
Translation elongation factor 1 beta; similar to YAL003W
Membrane-binding component of the CORVET complex; similar to YAL002W
Subunit of RNA polymerase III transcription initiation factor complex; similar to YAL001C
FG-nucleoporin component of central core of the nuclear pore complex; similar to YAR002W
Subunit of the COMPASS (Set1C) complex; similar to YAR003W
Subunit of heterotrimeric Replication Protein A (RPA); similar to YAR007C
Subunit of the tRNA splicing endonuclease; similar to YAR008W
Protein involved in bud-site selection; similar to YAR014C
N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase; similar to YAR015W
Nonessential serine/threonine protein kinase; similar to YAR018C
Protein kinase of the Mitotic Exit Network; similar to YAR019C
integral membrane protein; similar to YAR023C
integral membrane protein; similar to YAR028W
integral membrane protein, involved in vesicle formation; similar to YAR033W
Outer mitochondrial carnitine acetyltransferase; similar to YAR035W
Protein similar to mammalian oxysterol-binding protein; similar to YAR042W
Lectin-like protein involved in flocculation; similar to YAR050W
One of three repressible acid phosphatases; similar to YAR071W
Inosine monophosphate dehydrogenase; similar to YHR216W