Haloarcula marismortui ATCC 43049 plasmid pNG100, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloarculaceae; Haloarcula.
Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea
Submitted (09-APR-2004) Institute for Systems Biology, 1441 N 34th Street, Seattle, WA 98103, USA
REFSEQ INFORMATION: The reference sequence is identical to\nAY596290.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/30/2022 01:57:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,403\nCDSs (total) :: 4,341\nGenes (coding) :: 4,257\nCDSs (with protein) :: 4,257\nGenes (RNA) :: 62\nrRNAs :: 4, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 2\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 34 of 84\nPseudo Genes (incomplete) :: 58 of 84\nPseudo Genes (internal stop) :: 22 of 84\nPseudo Genes (multiple problems) :: 25 of 84\nCRISPR Arrays :: 4\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_008525882.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_004966730.1
COORDINATES: similar to AA sequence:RefSeq:WP_004062141.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017344227.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007189820.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007189821.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222186.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222129.1
COORDINATES: similar to AA sequence:RefSeq:WP_004516568.1
COORDINATES: similar to AA sequence:RefSeq:WP_011225053.1
COORDINATES: similar to AA sequence:RefSeq:WP_006184169.1
COORDINATES: similar to AA sequence:RefSeq:WP_008387776.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222135.1
orc1/cdc6 family replication initiation protein
COORDINATES: protein motif:HMM:NF037417.2
COORDINATES: similar to AA sequence:RefSeq:WP_007189313.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222138.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189976.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190822.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222171.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190825.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014030754.1
COORDINATES: similar to AA sequence:RefSeq:WP_004592168.1
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010902762.1