Haloarcula marismortui ATCC 43049 plasmid pNG100, complete sequence.
type: Entry
definition: Haloarcula marismortui ATCC 43049 plasmid pNG100, complete sequence.
sequence version: NC_006389.1
sequence date: 2022-12-30
sequence: sequence
division: CON
label: NC_006389.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603385
keyword: RefSeq
source: Haloarcula marismortui ATCC 43049
organism: Haloarcula marismortui ATCC 43049
taxonomy: Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloarculaceae; Haloarcula.
reference: 1
references: 15520287
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAY596290.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/30/2022 01:57:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,403\nCDSs (total) :: 4,341\nGenes (coding) :: 4,257\nCDSs (with protein) :: 4,257\nGenes (RNA) :: 62\nrRNAs :: 4, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 2\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 34 of 84\nPseudo Genes (incomplete) :: 58 of 84\nPseudo Genes (internal stop) :: 22 of 84\nPseudo Genes (multiple problems) :: 25 of 84\nCRISPR Arrays :: 4\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 33303
topology: circular
so has quality: SO_0000988
location: 1..33303
location: region:1-33303:1
RO_0002162: 272569

NC_006389
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603385
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea
author: Baliga, N.S.
author: Bonneau, R.
author: Facciotti, M.T.
author: Pan, M.
author: Glusman, G.
author: Deutsch, E.W.
author: Shannon, P.
author: Chiu, Y.
author: Weng, R.S.
author: Gan, R.R.
author: Hung, P.
author: Date, S.V.
author: Marcotte, E.
author: Hood, L.
author: Ng, W.V.
journal: Genome Res
volume: 14
issue: 11
pages: 2221-2234
year: 2004
pubmed: 15520287
comments: Erratum:[Genome Res. 2004 Dec;14(12):2510]

15520287
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Baliga, N.S.
author: Bonneau, R.
author: Facciotti, M.T.
author: Pan, M.
author: Glusman, G.
author: Deutsch, E.W.
author: Shannon, P.
author: Chiu, Y.
author: Weng, R.S.
author: Kan, J.R.
author: Hung, P.
author: Date, S.
author: Marcotte, E.
author: Hood, L.
author: Ng, W.V.
journal: Submitted (09-APR-2004) Institute for Systems Biology, 1441 N 34th Street, Seattle, WA 98103, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33303:1
position: 33303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-33303:1:source
so part of: sequence
organism: Haloarcula marismortui ATCC 43049
mol type: genomic DNA
strain: ATCC 43049
type material: type strain of Haloarcula marismortui
plasmid: pNG100

43049
type: ATCC
SIO_000068: atcc

272569
type: Taxonomy
SIO_000068: taxonomy

RR_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00005
old locus tag: pNG1001
so part of: sequence
location: complement(167..817)
location: region:167-817:-1
so has part: feature:167-817:-1:exon
subclass of: SO_0000010

3126633
type: Gene
SIO_000068: ncbigene

position:167:-1
position: 167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817:-1
position: 817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167-817:-1:exon

RR_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00005
old locus tag: pNG1001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008525882.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKDDSSEDDEQNPHLHLSEKYDRMVESQLSALSNVDTNAWRAARLIGIILGVLLTGLSLIAQGENPAVTFSPAVLMFFALGVISLLVSLVFAAVSILNVEVGYGPGTHLTDGLTEGDVSPEAYPGIVSKNLAKNIEKNNRVLSVKADKLRYTYNFLIVGLISFSSAVGILIISPSRALTIIGGLSSGAIMTGITYYILGKKYDIDSEGVDSVGQE
SIO_010081: RR_RS00005
subclass of: SO_0000673
so part of: RR_RS00005
location: complement(167..817)
location: region:167-817:-1
so has part: feature:167-817:-1:exon

WP_011222113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167-817:-1:exon

RR_RS21710
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS21710
so part of: sequence
location: complement(824..1954)
location: region:824-1954:-1
so has part: feature:824-1954:-1:exon
subclass of: SO_0000010

37644176
type: Gene
SIO_000068: ncbigene

position:824:-1
position: 824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1954:-1
position: 1954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824-1954:-1:exon

RR_RS21710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS21710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGQNQYERCVEQAFAEFRAYDEVVDIVAAWEQFLSDISVASAFDFQWFPDPITTDTGAERAPTFISSLTSEYAIVADVIQEIDSDAQDFRERLVPLTAVDTGDVAYDGISPETVDVCLLIASEQAQAARVHLDSFDDGFLQAPNVIPLEFSLIDQDTTPKYKFERMSLVGENFRDKSLPTHARMSPRVSTDGELASIQISISDFDRHKATGVLCNKQPPSLYLACHMWDRVFYDQLNDSQQIEWRREDPDQTLTFEIEAGSLADKLNDSYIPNGSVNSAWVNDTLDYLCVVETAEKLTDSRYRIQFRNLSEKRREYKDVVVRGGEFSDLAMLFAGWHCENEVELERGDLDKLTEPTESVGATDSEDYTQPTIGEF
SIO_010081: RR_RS21710
subclass of: SO_0000673
so part of: RR_RS21710
location: complement(824..1954)
location: region:824-1954:-1
so has part: feature:824-1954:-1:exon

WP_137440587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824-1954:-1:exon

RR_RS21715
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS21715
so part of: sequence
location: complement(1960..3078)
location: region:1960-3078:-1
so has part: feature:1960-3078:-1:exon
subclass of: SO_0000010

37644177
type: Gene
SIO_000068: ncbigene

position:1960:-1
position: 1960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3078:-1
position: 3078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960-3078:-1:exon

RR_RS21715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS21715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDTNLYQFTDLDSLDTLFAWANEAIEQEDNPVRSLTFIAEEKPKAVFASNSPTGFSVDIDDRGEFLKLSLTRRIQGSGEDYNEDGYKFLSGTVYVFSHEDTDAYTAFAVSDREFFNQAVRRYIQGLPPSVSTSFLSTDELQQLLNKLSDDINGNLYVTKGVTKSPVGDTEVKYFDNSRYFELFNLEEVSQQNSYVDKIEFELRQSRHKFSGQLSRKGASRYVSGNQSIYFKKILPSLATLLSKKGELFNDKAREYGTREAETIEITYEEGAIKGREENIRLINALEGLKRSSITVYHKNPYMHASILDYEDGTNADVFLTSDRRVSIVPGFNASRKSLSRICDRINQGFLEGEVIEGQNRSKDPEEYFVKG
SIO_010081: RR_RS21715
subclass of: SO_0000673
so part of: RR_RS21715
location: complement(1960..3078)
location: region:1960-3078:-1
so has part: feature:1960-3078:-1:exon

WP_049938376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1960-3078:-1:exon

RR_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00020
old locus tag: pNG1004
so part of: sequence
location: complement(3779..4057)
location: region:3779-4057:-1
so has part: feature:3779-4057:-1:exon
subclass of: SO_0000010

3126636
type: Gene
SIO_000068: ncbigene

position:3779:-1
position: 3779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4057:-1
position: 4057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779-4057:-1:exon

RR_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00020
old locus tag: pNG1004
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQFEEEIFEWGEANYGDRIDSSELKFVDTQSDDEDTERVPPEVEAGLEPEYDCPDCDYYKTGVTTGPQSFLEHLQEAHDYDQSEAHSILNG
SIO_010081: RR_RS00020
subclass of: SO_0000673
so part of: RR_RS00020
location: complement(3779..4057)
location: region:3779-4057:-1
so has part: feature:3779-4057:-1:exon

WP_011222116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3779-4057:-1:exon

RR_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00025
old locus tag: pNG1005
so part of: sequence
location: complement(4121..4849)
location: region:4121-4849:-1
so has part: feature:4121-4849:-1:exon
subclass of: SO_0000010

3126637
type: Gene
SIO_000068: ncbigene

position:4121:-1
position: 4121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4849:-1
position: 4849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4121-4849:-1:exon

RR_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00025
old locus tag: pNG1005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQETLPRAVNNLAEAWEGAGLDIRDYLLAGSVRDAIKLELSEQGGFHWTVCTDKERILGAAGEHLSRIHNVRVKARQHNLELAKEQTRLILRVNQNIREYIALCEKLGVDWSDDIHDLMRTRPGPAPTKTTTDEFDIHLCTELPPVQEAVDIVHSSLEEIRCYCGDNLANYLQEQFDDDQQDKAIKYIEELIIIVVYIGPVGRSEAETPEWAFHLKGRALQHAHEKFGLARVANDDRYLFI
SIO_010081: RR_RS00025
subclass of: SO_0000673
so part of: RR_RS00025
location: complement(4121..4849)
location: region:4121-4849:-1
so has part: feature:4121-4849:-1:exon

WP_011222117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4121-4849:-1:exon

RR_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00030
old locus tag: pNG1006
so part of: sequence
location: 5143..5688
location: region:5143-5688:1
so has part: feature:5143-5688:1:exon
subclass of: SO_0000010

3126638
type: Gene
SIO_000068: ncbigene

position:5143:1
position: 5143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5688:1
position: 5688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5143-5688:1:exon

RR_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00030
old locus tag: pNG1006
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTESQTNPEDDSDDGDATVQLGARVDKDLAELVKGLVKHKHAKIRGPLGRSYEKALEYYIGVHLFQHPDDLEVIAEASDIEDKERAVERLREAIDNVGPDLTGVKQALEDPQREQVHHTEQPAGRGLSVPQAETQSMVLSEQKEWEQSSVRRSVLGEDMSMEDETLDRIAERVAEKLENRD
SIO_010081: RR_RS00030
subclass of: SO_0000673
so part of: RR_RS00030
location: 5143..5688
location: region:5143-5688:1
so has part: feature:5143-5688:1:exon

WP_011222118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5143-5688:1:exon

RR_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00035
old locus tag: pNG1007
so part of: sequence
location: 5961..6350
location: region:5961-6350:1
so has part: feature:5961-6350:1:exon
subclass of: SO_0000010

3126639
type: Gene
SIO_000068: ncbigene

position:5961:1
position: 5961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6350:1
position: 6350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5961-6350:1:exon

RR_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00035
old locus tag: pNG1007
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVDDVGQAAEIGESHMEQPNQATDGDEEREQASESDKSSRNRPPLFEIDIVAFGHKIQFVPNVHSVLAFSAIFVAAALIYSEVISHGEATPLLFAEVAHFAGWVYLELPETLVIEAIEKEEEAERYGI
SIO_010081: RR_RS00035
subclass of: SO_0000673
so part of: RR_RS00035
location: 5961..6350
location: region:5961-6350:1
so has part: feature:5961-6350:1:exon

WP_049938377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5961-6350:1:exon

RR_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00040
old locus tag: pNG1008
so part of: sequence
location: complement(7033..7386)
location: region:7033-7386:-1
so has part: feature:7033-7386:-1:exon
subclass of: SO_0000010

3126640
type: Gene
SIO_000068: ncbigene

position:7033:-1
position: 7033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7386:-1
position: 7386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7033-7386:-1:exon

RR_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00040
old locus tag: pNG1008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004966730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPTDDTAELTEQDVLKAFNYETTVEAPMLTVAEIADALAKHFDIEVGNEIIRCRLREMESDELVASEGTEDSTVEWTALVAPRLSDEVLADAEAAEGEFERGETVSLEELTDDPKD
SIO_010081: RR_RS00040
subclass of: SO_0000673
so part of: RR_RS00040
location: complement(7033..7386)
location: region:7033-7386:-1
so has part: feature:7033-7386:-1:exon

WP_011222120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7033-7386:-1:exon

RR_RS21980
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS21980
old locus tag: pNG1009
so part of: sequence
location: complement(7660..8523)
location: region:7660-8523:-1
so has part: feature:7660-8523:-1:exon
subclass of: SO_0000010

41340140
type: Gene
SIO_000068: ncbigene

position:7660:-1
position: 7660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8523:-1
position: 8523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7660-8523:-1:exon

RR_RS21980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS21980
old locus tag: pNG1009
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYEDWAGGIRCSECGREYTGIECPICRQADPTEREVVTEHGNGRGDQQPPENGTVSADSGVYDIDKIEHERHTDAEKVNPEVVDPSDYVTRAVSGVVFNKRHAWKAENRADEDNPPSLFVVTTADSEFNWIEIPLWDDAEGAMEDISIGDPIQAEGKLSKDNGVHNIHVHSQDSIDILTEPPEVKFDSMAIDQITSTTPKVDLEGTVERVGEIKDIQLDDEKVKLREIHVSDLNNDQIQVALWRTNAYEKVAPGDEIIIAGGLAKPHNEKVVVRVGWSGHIGYRSS
SIO_010081: RR_RS21980
subclass of: SO_0000673
so part of: RR_RS21980
location: complement(7660..8523)
location: region:7660-8523:-1
so has part: feature:7660-8523:-1:exon

WP_011222121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7660-8523:-1:exon

RR_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00055
pseudo: true
so part of: sequence
location: <8889..8996
location: region:8889-8996:1
so has part: feature:8889-8996:1:exon
subclass of: SO_0000010

25139303
type: Gene
SIO_000068: ncbigene

position:8889:1
position: 8889
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:8996:1
position: 8996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8889-8996:1:exon

RR_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004062141.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CopG family transcriptional regulator
SIO_010081: RR_RS00055
subclass of: SO_0000673
so part of: RR_RS00055
location: <8889..8996
location: region:8889-8996:1
so has part: feature:8889-8996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8889-8996:1:exon

RR_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00060
old locus tag: pNG1011
pseudo: true
so part of: sequence
location: 9004..9487
location: region:9004-9487:1
so has part: feature:9004-9487:1:exon
subclass of: SO_0000010

3126642
type: Gene
SIO_000068: ncbigene

position:9004:1
position: 9004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9487:1
position: 9487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9004-9487:1:exon

RR_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00060
old locus tag: pNG1011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017344227.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: RR_RS00060
subclass of: SO_0000673
so part of: RR_RS00060
location: 9004..9487
location: region:9004-9487:1
so has part: feature:9004-9487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9004-9487:1:exon

RR_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00065
old locus tag: pNG1012
so part of: sequence
location: 10248..10985
location: region:10248-10985:1
so has part: feature:10248-10985:1:exon
subclass of: SO_0000010

3126643
type: Gene
SIO_000068: ncbigene

position:10248:1
position: 10248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10985:1
position: 10985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10248-10985:1:exon

RR_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00065
old locus tag: pNG1012
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAESAEPELSIEDIEFLTIVRDVSDNPDEYDGTELGEAPATVTVITDNTSLSKSQVKYRLNSESDAGNSRGFTEDQLGYIESYGASMTEKGWGPRSCEITEKGREAVDGVTENSTLSLSTSEGGSPAGGSTERIEELAEDIERLDNQLAAMGTRLTEATEAIEEFNEAEFGAVDDEIAHKLEAALNAMITYNNIFEYVLGADVRPFHPDEDGKIDAEMVAEGREQIVAAINATSESDAAEVLRRK
SIO_010081: RR_RS00065
subclass of: SO_0000673
so part of: RR_RS00065
location: 10248..10985
location: region:10248-10985:1
so has part: feature:10248-10985:1:exon

WP_011222123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10248-10985:1:exon

RR_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00070
old locus tag: pNG1013
so part of: sequence
location: complement(11066..11311)
location: region:11066-11311:-1
so has part: feature:11066-11311:-1:exon
subclass of: SO_0000010

3126644
type: Gene
SIO_000068: ncbigene

position:11066:-1
position: 11066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11311:-1
position: 11311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11066-11311:-1:exon

RR_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00070
old locus tag: pNG1013
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFAVLSLLVALVAGSFIILQRFGEFTAVRWSAIVGVNCVVALQTLSGGTLLKTVVTPDVFVLVLVVAGYAVVQLMQGDPV
SIO_010081: RR_RS00070
subclass of: SO_0000673
so part of: RR_RS00070
location: complement(11066..11311)
location: region:11066-11311:-1
so has part: feature:11066-11311:-1:exon

WP_011222124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11066-11311:-1:exon

RR_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00075
old locus tag: pNG1014
so part of: sequence
location: complement(11311..11520)
location: region:11311-11520:-1
so has part: feature:11311-11520:-1:exon
subclass of: SO_0000010

3126645
type: Gene
SIO_000068: ncbigene

position:11520:-1
position: 11520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11311-11520:-1:exon

RR_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00075
old locus tag: pNG1014
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVVPEGSWVDEARGHPRKLFGLVVGLALLATGNWVLLWPGIVLSGLAVGQLVTYWGDETDASVDRRAV
SIO_010081: RR_RS00075
subclass of: SO_0000673
so part of: RR_RS00075
location: complement(11311..11520)
location: region:11311-11520:-1
so has part: feature:11311-11520:-1:exon

WP_011222125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11311-11520:-1:exon

RR_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00080
old locus tag: pNG1015
so part of: sequence
location: complement(11675..12016)
location: region:11675-12016:-1
so has part: feature:11675-12016:-1:exon
subclass of: SO_0000010

3126647
type: Gene
SIO_000068: ncbigene

position:11675:-1
position: 11675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12016:-1
position: 12016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11675-12016:-1:exon

RR_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00080
old locus tag: pNG1015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007189820.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix DNA-binding protein
translation: MTADSDASDQPDWAAYQNLTPTAQTCLLLVANYDGDAWGGLIAQAAQEGLDVSDRHVRRSLADLESAGLVESSEATQRRETYSVTDDGREVLSGMRDSLAQTLEMVDNREGSA
SIO_010081: RR_RS00080
subclass of: SO_0000673
so part of: RR_RS00080
location: complement(11675..12016)
location: region:11675-12016:-1
so has part: feature:11675-12016:-1:exon

WP_011222127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11675-12016:-1:exon

RR_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00085
so part of: sequence
location: complement(12013..12276)
location: region:12013-12276:-1
so has part: feature:12013-12276:-1:exon
subclass of: SO_0000010

25139304
type: Gene
SIO_000068: ncbigene

position:12013:-1
position: 12013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12276:-1
position: 12276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12013-12276:-1:exon

RR_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007189821.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASDVRSLARAGRAILVVPLASGVGAIRATLRALVAVVMSVLGGCWVEAITVEQWLPISAIERLWLFDGERSLAVPTQTTLTTAVSR
SIO_010081: RR_RS00085
subclass of: SO_0000673
so part of: RR_RS00085
location: complement(12013..12276)
location: region:12013-12276:-1
so has part: feature:12013-12276:-1:exon

WP_079890951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12013-12276:-1:exon

RR_RS22130
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS22130
so part of: sequence
location: complement(12276..12479)
location: region:12276-12479:-1
so has part: feature:12276-12479:-1:exon
subclass of: SO_0000010

55596766
type: Gene
SIO_000068: ncbigene

position:12479:-1
position: 12479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12276-12479:-1:exon

RR_RS22130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS22130
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDPAKRLVETDTERPFTFMTAVDGDPAGGPSGTNRPEWTKMSAGYARVSGTGTEGGTPLNAVGGGN
SIO_010081: RR_RS22130
subclass of: SO_0000673
so part of: RR_RS22130
location: complement(12276..12479)
location: region:12276-12479:-1
so has part: feature:12276-12479:-1:exon

WP_171814219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12276-12479:-1:exon

RR_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00090
old locus tag: pNG1017
so part of: sequence
location: complement(12472..14019)
location: region:12472-14019:-1
so has part: feature:12472-14019:-1:exon
subclass of: SO_0000010

3126648
type: Gene
SIO_000068: ncbigene

position:12472:-1
position: 12472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14019:-1
position: 14019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12472-14019:-1:exon

RR_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00090
old locus tag: pNG1017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011222186.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQNLPKSEQDGFTEKTIQGAQIIHGADPHGKWPTDAEEIRNRFDIPAFDPEAFYPREGAALSGVYPDFLVHIENSADGPSTVNSPGASLTMVEAPKGSGKSTAADQFATYQMEHNDERIVRNGRQKSSDWRRLADWTTLWLPSGVEVDGRWMETVDRDDPDPDELCRDVRYYSDVHELVARLQDHPKGTYNVVFPDPYFRGCVEALSTADATVQQPEFIPKNEPNPTPASHWWFGFLAARTFDGVRVDGDGERNWMTAHIDEFGMLAPESAPGGESGHWTHQCVQIMADIAKEMRSAGLSLVGYGHHEEDVHNHWLKEFDFWVELSNHDRGNRTTKAEAPKPFRDIEQDQDLLSKRPKGFGLCYTANRFSEFQFSDLGYPHDTPEFQLRLGIPEAVDVPTSDDGGMIVEDLQVATDDEGQPTILKEYRAADGAVHELRVLAPGRGIIDISGEKPEPLEVLSSPYPDAEFPENPIKTTQTHYDIMFKPDANAEIVAARIPRRTGPGTTTEVEADE
SIO_010081: RR_RS00090
subclass of: SO_0000673
so part of: RR_RS00090
location: complement(12472..14019)
location: region:12472-14019:-1
so has part: feature:12472-14019:-1:exon

WP_011222128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12472-14019:-1:exon

RR_RS22135
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS22135
so part of: sequence
location: complement(14044..14187)
location: region:14044-14187:-1
so has part: feature:14044-14187:-1:exon
subclass of: SO_0000010

55596767
type: Gene
SIO_000068: ncbigene

position:14044:-1
position: 14044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14187:-1
position: 14187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14044-14187:-1:exon

RR_RS22135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS22135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNALEAAGHGLAGGATGADETGGHDSIGSHDEHPRNAGFGDNAQRRN
SIO_010081: RR_RS22135
subclass of: SO_0000673
so part of: RR_RS22135
location: complement(14044..14187)
location: region:14044-14187:-1
so has part: feature:14044-14187:-1:exon

WP_161618949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14044-14187:-1:exon

RR_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00095
old locus tag: pNG1018
so part of: sequence
location: 14550..14936
location: region:14550-14936:1
so has part: feature:14550-14936:1:exon
subclass of: SO_0000010

3126649
type: Gene
SIO_000068: ncbigene

position:14550:1
position: 14550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14936:1
position: 14936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14550-14936:1:exon

RR_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00095
old locus tag: pNG1018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011222129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANSVMLGRSVVQRGSVSLYLSIDQGWQQAAGLDVDDTCRLEIEEVGDASLTVALFIDKDYGTVADPPGQFDIEPVDIQTDLQWCLPADMRHEFGISEEFTYSAEYHGDGEIHYELTSPTVRDERLLA
SIO_010081: RR_RS00095
subclass of: SO_0000673
so part of: RR_RS00095
location: 14550..14936
location: region:14550-14936:1
so has part: feature:14550-14936:1:exon

WP_011222129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14550-14936:1:exon

RR_RS22140
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS22140
old locus tag: pNG1019
so part of: sequence
location: 15086..15238
location: region:15086-15238:1
so has part: feature:15086-15238:1:exon
subclass of: SO_0000010

55596768
type: Gene
SIO_000068: ncbigene

position:15086:1
position: 15086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15238:1
position: 15238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15086-15238:1:exon

RR_RS22140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS22140
old locus tag: pNG1019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004516568.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDDTQRLGRCPDCGERITTPWLLVEYEKDDGTEGIWAECPTCEDVVAPE
SIO_010081: RR_RS22140
subclass of: SO_0000673
so part of: RR_RS22140
location: 15086..15238
location: region:15086-15238:1
so has part: feature:15086-15238:1:exon

WP_011222130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15086-15238:1:exon

RR_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00100
old locus tag: pNG1020
so part of: sequence
location: complement(16169..17194)
location: region:16169-17194:-1
so has part: feature:16169-17194:-1:exon
subclass of: SO_0000010

3126651
type: Gene
SIO_000068: ncbigene

position:16169:-1
position: 16169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17194:-1
position: 17194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16169-17194:-1:exon

RR_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00100
old locus tag: pNG1020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011225053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MDRLPPAYDATPGDGALEAAIEERLVDIDSGRYRTNVASVLRKFATWARDQHGISSPEDIDDDLCRQYARDLARADDRDDISPETARRYFAYVRSFLTWAVYEGLIPTNPAKTNHAEGPLPTDETETDQQYWTTRDRDAICATATARVDKAGESDDIDRTAAYRDQALVFLLAYSGARSAELVAVSDDEERNGLRWRHVNLEAGTMQVFGKNRTRESAPILDDALRPLRRWKQLREPDENEAVFPRLDNAAKALDPTPSITTQSARNILADLCEWSEYEFEDPLKPHGARRGLGREIYRENPQLAQDVLRHKSIETTHEGYAQEAAKRTRDEANEIISDTE
SIO_010081: RR_RS00100
subclass of: SO_0000673
so part of: RR_RS00100
location: complement(16169..17194)
location: region:16169-17194:-1
so has part: feature:16169-17194:-1:exon

WP_011222131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16169-17194:-1:exon

RR_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00105
old locus tag: pNG1021
so part of: sequence
location: 17537..18466
location: region:17537-18466:1
so has part: feature:17537-18466:1:exon
subclass of: SO_0000010

3126652
type: Gene
SIO_000068: ncbigene

position:17537:1
position: 17537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18466:1
position: 18466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17537-18466:1:exon

RR_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00105
old locus tag: pNG1021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006184169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDAFTEALDETEGAQAAYGKQLGFVEQRTPFAAESLPDTSIAVNVNQDLLKEVASHIINRAGHVSVIDKRGAGKTHFRELVYDALRDGPRSEEFAIARIKEVESITTRRFYTRLLDELQRYEYLDIPESYPHATDEVRSVVEDVAGQLENQNRCGIIQVDQLEDAARRKSTFEQLLAGLQSVGDLGESEPVFLLFLFGTPTAGDRIDELRETLSSRLVAKHRSLERFEFAETDELISRWLAWARDEEFTEGYPADPFSAGAIRKVVDRSDGTPRDVRQQCYHGFRGGAEQYADTGKVRITEETFESYV
SIO_010081: RR_RS00105
subclass of: SO_0000673
so part of: RR_RS00105
location: 17537..18466
location: region:17537-18466:1
so has part: feature:17537-18466:1:exon

WP_011222132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17537-18466:1:exon

RR_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00110
old locus tag: pNG1022
so part of: sequence
location: 18488..18793
location: region:18488-18793:1
so has part: feature:18488-18793:1:exon
subclass of: SO_0000010

3126653
type: Gene
SIO_000068: ncbigene

position:18488:1
position: 18488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18793:1
position: 18793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18488-18793:1:exon

RR_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00110
old locus tag: pNG1022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008387776.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGDNAFGDALDDAAEEQTADETDSSDATERFIKAMGGDGTKSKTIGFAVSPEMKYFYDELRASNDVDVDPGDEFRDQLERLANRHPEVADKARRKLKIDTE
SIO_010081: RR_RS00110
subclass of: SO_0000673
so part of: RR_RS00110
location: 18488..18793
location: region:18488-18793:1
so has part: feature:18488-18793:1:exon

WP_011222133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18488-18793:1:exon

RR_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00120
old locus tag: pNG1024
so part of: sequence
location: 19669..20877
location: region:19669-20877:1
so has part: feature:19669-20877:1:exon
subclass of: SO_0000010

3126655
type: Gene
SIO_000068: ncbigene

position:19669:1
position: 19669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20877:1
position: 20877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19669-20877:1:exon

RR_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00120
old locus tag: pNG1024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011222135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orc1/cdc6 family replication initiation protein
translation: MDSDDESEAVHSVFNTVSQEGGKIFEQREILQIDYVPSENRIVGRDEQIEKVAGEIGPIVVGQPPNSIIIYGKTGCGKSLVAKHVSKIAREEAENRGVKLATGYVNCQQAKGNSDALSKYGRAINPPESGVKFPTRGISENEYFERVWSVLNEFYDAAIIVLDEVDKLNNDDLLMALSRAGEDGSVDVPIGVIAVSNKINYRDKMSERTKSSFGHNEFIFEPYDADQIREILQNRTDAFADGVLDDGVIPRAAALSAKEHGDARKAMRLLRYAGDQANKENAERVKESHLTDARASAEVDRLLELISGLPPHSKHVLLALANLTKNHPDREWFRTVRVREIYLEVCDRSGADPLSAERTRQLLNELCFLEVAGSRRGTGEGKGHYSQYTLLWDADIVLTLGN
SIO_010081: RR_RS00120
subclass of: SO_0000673
so part of: RR_RS00120
location: 19669..20877
location: region:19669-20877:1
so has part: feature:19669-20877:1:exon

WP_011222135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19669-20877:1:exon

RR_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00125
old locus tag: pNG1025
so part of: sequence
location: 21035..21781
location: region:21035-21781:1
so has part: feature:21035-21781:1:exon
subclass of: SO_0000010

3126656
type: Gene
SIO_000068: ncbigene

position:21035:1
position: 21035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21781:1
position: 21781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21035-21781:1:exon

RR_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00125
old locus tag: pNG1025
inference: COORDINATES: protein motif:HMM:NF037417.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYSDEELLTHIRELAAELGETPSVNQMSAAEGRPSGSTYRHRFDSWSDAVEQAGVEPTDQSGPYTKTELLEHIRALATELGRPPTLEDLNADDDRPSFKPYRRVFDTWNAALTAAGFDPNHAMSHTEPEGYSDAELLTHIQELAEELGRPPTQDEMHQADDRPSESTYKRRFESWTSAIEEAGFDSGRKTSSYSEAELLDLLRDLATELGETPSVQQLNAAEDYPSRAVYRNRFGSWSAALEAANLE
SIO_010081: RR_RS00125
subclass of: SO_0000673
so part of: RR_RS00125
location: 21035..21781
location: region:21035-21781:1
so has part: feature:21035-21781:1:exon

WP_011222136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21035-21781:1:exon

RR_RS22885
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS22885
old locus tag: pNG1026
so part of: sequence
location: 22035..23426
location: region:22035-23426:1
so has part: feature:22035-23426:1:exon
subclass of: SO_0000010

77383590
type: Gene
SIO_000068: ncbigene

position:22035:1
position: 22035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23426:1
position: 23426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22035-23426:1:exon

RR_RS22885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS22885
old locus tag: pNG1026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007189313.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin
translation: MFEKIANENERGQVGIGTLIVFIAMVLVAAIAAGVLINTAGFLQSSAEQTGQESSDQVTNQIQVASKVGIVGGQGASDTIAIQSPSGNQFAIESGSTVTATEVTDNNDDGYILVDSPQGNELAVDGGDQIRLTRESGSQVEITNEDTGVSITSSKLDLKDASGSDTLKFVRTYEDPVNGQLQLQSVTIDNTGTADSTDDGVSATLSTGENTEKYIPLTDGSSKAIIGNGETVTVTSDSDSGSTLSAGAETLSVDPGDEVLFEVTGDSEVTITNQESGSSISYNPLDGSNYLSGTAGSGSTLKLSVSDDGSATSLDVTSGLTGLTTGDFATGPGNEIQLVNEDYNAGGGGVGTLNIVAIKGSGADQINMEETTITTIGPDGTNTLTYSDDGATEDQTFAVESIQDDDDSLPVMTDSDRFRVVIDPGTLETGETMTLEVTTESGATTEIRISVPNTLAGESAVQV
SIO_010081: RR_RS22885
subclass of: SO_0000673
so part of: RR_RS22885
location: 22035..23426
location: region:22035-23426:1
so has part: feature:22035-23426:1:exon

WP_011222137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22035-23426:1:exon

RR_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00135
old locus tag: pNG1027
so part of: sequence
location: complement(23766..24896)
location: region:23766-24896:-1
so has part: feature:23766-24896:-1:exon
subclass of: SO_0000010

3126658
type: Gene
SIO_000068: ncbigene

position:23766:-1
position: 23766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24896:-1
position: 24896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23766-24896:-1:exon

RR_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00135
old locus tag: pNG1027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011222138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDTSKLDWMVPADEWEQFRRHIESRFGVAEGYLGREAELAMEQYIDADGYARVETLVDRLVSAAGRSPDHASEKIKSDLSSQEPTRIGIRVGTPLKEEFCAYVDEHTDYNYGVALARALNVYRDGGRSRRVEDKLDRVVDDAESMLGELNDDSDKSLSSVQRKTIAICHDVGESFTDEVLNESIHNIAAEGPKASDPTLEKYRDLVIDRLDYERHPHNEELWISRDQAEEIAPDETPAECRRSVELLDTDEMKRRLIYTVGRRAMATSSKDVTLPERELREAVFDDEISRPTMHDVMQAAAEHFGIGTGKPDRQQVLRLNLTELEIDHPDMAQTIRHFANADGDSRLADSGETTLGSYGGGQQPSAMTDGGTVAD
SIO_010081: RR_RS00135
subclass of: SO_0000673
so part of: RR_RS00135
location: complement(23766..24896)
location: region:23766-24896:-1
so has part: feature:23766-24896:-1:exon

WP_011222138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23766-24896:-1:exon

RR_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00140
old locus tag: pNG1030
so part of: sequence
location: complement(25470..25748)
location: region:25470-25748:-1
so has part: feature:25470-25748:-1:exon
subclass of: SO_0000010

3126659
type: Gene
SIO_000068: ncbigene

position:25470:-1
position: 25470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25748:-1
position: 25748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25470-25748:-1:exon

RR_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00140
old locus tag: pNG1030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007189976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRASQGAPATRRARADDTADVGTPVKVDRLEGGSLLGIVRERYTYEEYDAPPRVLVESSETMVNVATDRVSIARGSNADVVRSLVEEDTNV
SIO_010081: RR_RS00140
subclass of: SO_0000673
so part of: RR_RS00140
location: complement(25470..25748)
location: region:25470-25748:-1
so has part: feature:25470-25748:-1:exon

WP_011222139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25470-25748:-1:exon

RR_RS22145
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS22145
old locus tag: pNG1028
so part of: sequence
location: complement(25741..25881)
location: region:25741-25881:-1
so has part: feature:25741-25881:-1:exon
subclass of: SO_0000010

55596769
type: Gene
SIO_000068: ncbigene

position:25741:-1
position: 25741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25881:-1
position: 25881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25741-25881:-1:exon

RR_RS22145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS22145
old locus tag: pNG1028
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASEPNATVDRVIEIADLVADDADADAEAVLLDALGRVRKRGGTDE
SIO_010081: RR_RS22145
subclass of: SO_0000673
so part of: RR_RS22145
location: complement(25741..25881)
location: region:25741-25881:-1
so has part: feature:25741-25881:-1:exon

WP_011222140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25741-25881:-1:exon

RR_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00145
old locus tag: pNG1029
so part of: sequence
location: complement(25871..26083)
location: region:25871-26083:-1
so has part: feature:25871-26083:-1:exon
subclass of: SO_0000010

3126661
type: Gene
SIO_000068: ncbigene

position:25871:-1
position: 25871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26083:-1
position: 26083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25871-26083:-1:exon

RR_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00145
old locus tag: pNG1029
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRLELVEKPDTPESFTKTIEHYGAAIPREGELVTWDTDHYRVTEVQHRIQLGTVVVHLRPRDQEGDDGE
SIO_010081: RR_RS00145
subclass of: SO_0000673
so part of: RR_RS00145
location: complement(25871..26083)
location: region:25871-26083:-1
so has part: feature:25871-26083:-1:exon

WP_011222141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25871-26083:-1:exon

RR_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00150
old locus tag: pNG1032
so part of: sequence
location: complement(26080..26586)
location: region:26080-26586:-1
so has part: feature:26080-26586:-1:exon
subclass of: SO_0000010

3126662
type: Gene
SIO_000068: ncbigene

position:26080:-1
position: 26080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26586:-1
position: 26586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26080-26586:-1:exon

RR_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00150
old locus tag: pNG1032
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAILYQCPRCTRQMAEPETTDPRLCPCHRVVVGPDGDTERRFEAVGTVAETPNGWELLGNAAEILQQGFGVRYENGHRYRLKEGGLFQDFDTDDVPVPGEIHAVEATPHGPRYTVRPDTEWWSPEWDVDDDVPEDHVWHWEIVEVTERTRASARLADIQSEYGGGQP
SIO_010081: RR_RS00150
subclass of: SO_0000673
so part of: RR_RS00150
location: complement(26080..26586)
location: region:26080-26586:-1
so has part: feature:26080-26586:-1:exon

WP_011222142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26080-26586:-1:exon

RR_RS22715
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS22715
old locus tag: pNG1033
so part of: sequence
location: complement(26587..27087)
location: region:26587-27087:-1
so has part: feature:26587-27087:-1:exon
subclass of: SO_0000010

69103195
type: Gene
SIO_000068: ncbigene

position:26587:-1
position: 26587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27087:-1
position: 27087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26587-27087:-1:exon

RR_RS22715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS22715
old locus tag: pNG1033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007190822.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQSEQPATGTELCWDHEDCPRDDCDGGLQQQDRFNVLCLACEGVWTYVKTSTAHLLQTADCETVATKPIAMSDGGQSPGDARIGADVPTAIRHGGATRPVQKLDREGNLTVYRGHAVAFECQDCGNVQWFATGRFRFIADCQECGLGSCFEFDFELARSATRGGEP
SIO_010081: RR_RS22715
subclass of: SO_0000673
so part of: RR_RS22715
location: complement(26587..27087)
location: region:26587-27087:-1
so has part: feature:26587-27087:-1:exon

WP_011222143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26587-27087:-1:exon

RR_RS22890
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS22890
old locus tag: pNG1034
so part of: sequence
location: complement(27077..27205)
location: region:27077-27205:-1
so has part: feature:27077-27205:-1:exon
subclass of: SO_0000010

77383591
type: Gene
SIO_000068: ncbigene

position:27077:-1
position: 27077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27205:-1
position: 27205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27077-27205:-1:exon

RR_RS22890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS22890
old locus tag: pNG1034
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTDHGTHDGGCVADADIEQRLARLERIVLDEGDDQEGDDAE
SIO_010081: RR_RS22890
subclass of: SO_0000673
so part of: RR_RS22890
location: complement(27077..27205)
location: region:27077-27205:-1
so has part: feature:27077-27205:-1:exon

WP_011222144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27077-27205:-1:exon

RR_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00160
old locus tag: pNG1035
so part of: sequence
location: complement(27202..27519)
location: region:27202-27519:-1
so has part: feature:27202-27519:-1:exon
subclass of: SO_0000010

3126665
type: Gene
SIO_000068: ncbigene

position:27202:-1
position: 27202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27519:-1
position: 27519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27202-27519:-1:exon

RR_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00160
old locus tag: pNG1035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011222171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPTDDEFYVMPKSQWNDGKVHHPAPEATREDPTPLCDAGTDDVEVFRVADETDRERYGLCSVCAAKANDEPDPRGNHDESGRSPADVLRENGFELPEDSTGGSA
SIO_010081: RR_RS00160
subclass of: SO_0000673
so part of: RR_RS00160
location: complement(27202..27519)
location: region:27202-27519:-1
so has part: feature:27202-27519:-1:exon

WP_011222145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27202-27519:-1:exon

RR_RS21985
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS21985
so part of: sequence
location: complement(27516..27749)
location: region:27516-27749:-1
so has part: feature:27516-27749:-1:exon
subclass of: SO_0000010

41340141
type: Gene
SIO_000068: ncbigene

position:27516:-1
position: 27516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27749:-1
position: 27749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27516-27749:-1:exon

RR_RS21985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS21985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTHRPNRPAYLQGHPHLVAQPPEPSTVSITRARNEALCTECRRRVTVSDGTEYGHARGLRVDNTVCPHHCHNGGVR
SIO_010081: RR_RS21985
subclass of: SO_0000673
so part of: RR_RS21985
location: complement(27516..27749)
location: region:27516-27749:-1
so has part: feature:27516-27749:-1:exon

WP_137440586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27516-27749:-1:exon

RR_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00165
so part of: sequence
location: complement(27746..28105)
location: region:27746-28105:-1
so has part: feature:27746-28105:-1:exon
subclass of: SO_0000010

25139306
type: Gene
SIO_000068: ncbigene

position:27746:-1
position: 27746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28105:-1
position: 28105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27746-28105:-1:exon

RR_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007190825.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDSPGQIDSTKMDHRSRNSAGPVAHGIMTETTRPQNDTAQDRQECRLQTAKRLLTEADTDAAVIEDCQTVLSRPGYDRSHSQARVDACAARLALAQADTTKRTREARQVLVAVSGGSQ
SIO_010081: RR_RS00165
subclass of: SO_0000673
so part of: RR_RS00165
location: complement(27746..28105)
location: region:27746-28105:-1
so has part: feature:27746-28105:-1:exon

WP_232508492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27746-28105:-1:exon

RR_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00170
so part of: sequence
location: 28205..28477
location: region:28205-28477:1
so has part: feature:28205-28477:1:exon
subclass of: SO_0000010

25139307
type: Gene
SIO_000068: ncbigene

position:28205:1
position: 28205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28477:1
position: 28477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28205-28477:1:exon

RR_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MAGDKPGPEQEVSDEELLRVLALAYKPALGTTEIADCVDLSRQAIDRRMKQLEEIRLVESGKFGSTRAWWLTDDGRRQVSDSELNEPSSQ
SIO_010081: RR_RS00170
subclass of: SO_0000673
so part of: RR_RS00170
location: 28205..28477
location: region:28205-28477:1
so has part: feature:28205-28477:1:exon

WP_007190826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28205-28477:1:exon

RR_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00175
so part of: sequence
location: 28841..29170
location: region:28841-29170:1
so has part: feature:28841-29170:1:exon
subclass of: SO_0000010

25139308
type: Gene
SIO_000068: ncbigene

position:28841:1
position: 28841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29170:1
position: 29170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28841-29170:1:exon

RR_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014030754.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKSASPTSKSVGTTEPNPQERTARELLTQGRPLFLGVDGEGAAHYWDSYEFAVAVVARDTRTEKVKLADTPYETLVGWCEYTQDERGWAVGPHVGGTIVDDLARRRNA
SIO_010081: RR_RS00175
subclass of: SO_0000673
so part of: RR_RS00175
location: 28841..29170
location: region:28841-29170:1
so has part: feature:28841-29170:1:exon

WP_049938386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28841-29170:1:exon

RR_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00180
so part of: sequence
location: 29167..29430
location: region:29167-29430:1
so has part: feature:29167-29430:1:exon
subclass of: SO_0000010

25139309
type: Gene
SIO_000068: ncbigene

position:29167:1
position: 29167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29430:1
position: 29430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29167-29430:1:exon

RR_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004592168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKTVRCTVENRQRVRRAARALRETAPTAVVETTPPVRSEHDAWTLDAVLRETEGVPPEVLRELALAGLTLQPTPTQAEHQHVVATA
SIO_010081: RR_RS00180
subclass of: SO_0000673
so part of: RR_RS00180
location: 29167..29430
location: region:29167-29430:1
so has part: feature:29167-29430:1:exon

WP_049938388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29167-29430:1:exon

RR_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS00185
old locus tag: pNG1040
so part of: sequence
location: 30098..32686
location: region:30098-32686:1
so has part: feature:30098-32686:1:exon
subclass of: SO_0000010

3126667
type: Gene
SIO_000068: ncbigene

position:30098:1
position: 30098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32686:1
position: 32686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30098-32686:1:exon

RR_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS00185
old locus tag: pNG1040
inference: COORDINATES: protein motif:HMM:NF016724.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MAFSDDDLRTYQQQAVRAIAEADEDYKSLILPTGAGKTRVGLAYASNILDKKDSVAYITQTNAHVGQVLSESDAIGVDAVHIPGRSAESQGDGGSGDREIDIQDYNIGFKVGVFSYAGYFLGSEVPTADTLIIDDAHAFTSEHVTHSAVILHRDDWGRQYDRLIDLIKDENPILESEIESLQQPIHRGGGTVLVPPPDTTEVEQAITSSVESMSEADGWEPYLLQKRLNASPDFVNWPCVITANTISWRPFILPFQSFGRSPNRDIEESELVAMTSIRDPEEFLQTRLGTPELVTKIEPPEPVDEMGSRVVVPYRDQYDRNPPSEGQINTINRWADRFGSVLVSVASHNSAQEVMKRLHKKDINPIEYESEISVQELQEQEEPRALVLVNKPSGIDISSSICPVAIHLDLPHSTSGHEVVAGDIEESGAVAEASLAVRLSQLLGRLNRSDEDRSIHLLLADGLPLRRGTAFVKSLDPAVLTDLLIGRRGIAQEYELPTETGLLDDAEAFLNGDDSLRSSYITDPEQLRKLFLGSDVEGFSPGTIQQVEANLFAARGNFTRAAKQFERFSQNAEEQGYPDHSSFYDFQSIVYGSADTGSTSGTLNRSTDAIVDAALDRNPQSGALVAALRQIQSSEETDTQQARIEMRVKQQKRQAFYCFTRWYDEADGNVPDRDHYTSVDPWKEYWRSRFAKAEHSELTSAYSEAFELLGTDTPQREKQDNDLRIRWETENGEEFILAVEIKGWNPDTVDSEPDLKSDNIRQARTNARKIDADAALLASSRSGRTRDVPGSAETYGVHCLNGDASVAFADMMAEQCAILATVEQNQIDRNQVPLCARRIQKLLESDGRILDGQEIRALIDLE
SIO_010081: RR_RS00185
subclass of: SO_0000673
so part of: RR_RS00185
location: 30098..32686
location: region:30098-32686:1
so has part: feature:30098-32686:1:exon

WP_011222147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30098-32686:1:exon

RR_RS21160
type: Gene
subclass of: SO_0000704
RO_0002162: 272569
locus tag: RR_RS21160
old locus tag: pNG1041
pseudo: true
so part of: sequence
location: <33077..33286
location: region:33077-33286:1
so has part: feature:33077-33286:1:exon
subclass of: SO_0000010

31400608
type: Gene
SIO_000068: ncbigene

position:33077:1
position: 33077
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:33286:1
position: 33286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33077-33286:1:exon

RR_RS21160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 272569
locus tag: RR_RS21160
old locus tag: pNG1041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010902762.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISH6 family transposase
SIO_010081: RR_RS21160
subclass of: SO_0000673
so part of: RR_RS21160
location: <33077..33286
location: region:33077-33286:1
so has part: feature:33077-33286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33077-33286:1:exon