Mesorhizobium terrae strain NIBRBAC000500504 plasmid unnamed, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
Mesorhizobium soli sp. nov., a novel species isolated from soil
Submitted (28-AUG-2019) Biological Resources Research, National Institute of Biological Resources, Hwangyeong-ro, Seo-gu, Incheon 22689, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP044217.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: OCT-2017\nAssembly Method :: HGAP v. OCT-2017; CANU v. 1.6 ver\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 200.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/06/2023 01:28:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,780\nCDSs (total) :: 5,720\nGenes (coding) :: 5,653\nCDSs (with protein) :: 5,653\nGenes (RNA) :: 60\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 67\nCDSs (without protein) :: 67\nPseudo Genes (ambiguous residues) :: 0 of 67\nPseudo Genes (frameshifted) :: 30 of 67\nPseudo Genes (incomplete) :: 43 of 67\nPseudo Genes (internal stop) :: 11 of 67\nPseudo Genes (multiple problems) :: 15 of 67\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011893763.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009824514.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011649333.1
COORDINATES: protein motif:HMM:NF021438.2
COORDINATES: similar to AA sequence:RefSeq:WP_019859902.1
COORDINATES: similar to AA sequence:RefSeq:WP_009340163.1
COORDINATES: similar to AA sequence:RefSeq:WP_002717501.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002717502.1
COORDINATES: similar to AA sequence:RefSeq:WP_009340166.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002717504.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002717505.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_002717506.1
COORDINATES: similar to AA sequence:RefSeq:WP_009340170.1
COORDINATES: similar to AA sequence:RefSeq:WP_002717508.1
COORDINATES: similar to AA sequence:RefSeq:WP_019862426.1
COORDINATES: similar to AA sequence:RefSeq:WP_018900254.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
COORDINATES: similar to AA sequence:RefSeq:WP_017991061.1
protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
COORDINATES: similar to AA sequence:RefSeq:WP_006205650.1
COORDINATES: similar to AA sequence:RefSeq:WP_017486689.1
COORDINATES: similar to AA sequence:RefSeq:WP_002717509.1
COORDINATES: similar to AA sequence:RefSeq:WP_020179234.1
COORDINATES: similar to AA sequence:RefSeq:WP_002717510.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_012364268.1
GO:0003904 - deoxyribodipyrimidine photo-lyase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018859310.1
COORDINATES: protein motif:HMM:NF017934.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611638.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_043766072.1
COORDINATES: similar to AA sequence:RefSeq:WP_007675407.1
COORDINATES: similar to AA sequence:RefSeq:WP_011424584.1
COORDINATES: similar to AA sequence:RefSeq:WP_015316619.1
COORDINATES: similar to AA sequence:RefSeq:WP_017959619.1
COORDINATES: similar to AA sequence:RefSeq:WP_018431328.1
COORDINATES: similar to AA sequence:RefSeq:WP_006204407.1
COORDINATES: similar to AA sequence:RefSeq:WP_018431327.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018493252.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015316964.1
COORDINATES: similar to AA sequence:RefSeq:WP_015316799.1
COORDINATES: similar to AA sequence:RefSeq:WP_006337277.1
COORDINATES: similar to AA sequence:RefSeq:WP_013531275.1
COORDINATES: protein motif:HMM:NF040876.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015669949.1
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_001546961.1
COORDINATES: similar to AA sequence:RefSeq:WP_001546962.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010913940.1
COORDINATES: similar to AA sequence:RefSeq:WP_012695486.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008535671.1
phosphodiester glycosidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010909414.1
COORDINATES: similar to AA sequence:RefSeq:WP_006339522.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003499381.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015318448.1
COORDINATES: similar to AA sequence:RefSeq:WP_019995404.1
COORDINATES: similar to AA sequence:RefSeq:WP_012092589.1
COORDINATES: similar to AA sequence:RefSeq:WP_003167762.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF037889.2
COORDINATES: similar to AA sequence:RefSeq:WP_006022649.1
COORDINATES: similar to AA sequence:RefSeq:WP_018095341.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008598541.1
GO:0004673 - protein histidine kinase activity [Evidence IEA]
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_017997255.1
COORDINATES: similar to AA sequence:RefSeq:WP_013528924.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020601611.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010974311.1
GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013530776.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015316916.1
GO:0042314 - bacteriochlorophyll binding [Evidence IEA]
GO:0019684 - photosynthesis, light reaction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008839591.1
COORDINATES: similar to AA sequence:RefSeq:WP_003527841.1
COORDINATES: similar to AA sequence:RefSeq:WP_019860061.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548528.1
COORDINATES: similar to AA sequence:RefSeq:WP_008874645.1
COORDINATES: similar to AA sequence:RefSeq:WP_010916160.1
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012490576.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017956509.1
GO:0045027 - DNA end binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014528747.1
COORDINATES: similar to AA sequence:RefSeq:WP_009724428.1
COORDINATES: similar to AA sequence:RefSeq:WP_019863998.1
COORDINATES: similar to AA sequence:RefSeq:WP_008141688.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967257.1
COORDINATES: protein motif:HMM:TIGR02229.1
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: similar to AA sequence:RefSeq:WP_015247046.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_018263805.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: similar to AA sequence:RefSeq:WP_019143313.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF023249.2
COORDINATES: similar to AA sequence:RefSeq:WP_013897143.1
NrfD/PsrC family molybdoenzyme membrane anchor subunit
COORDINATES: protein motif:HMM:NF024247.2
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010683905.1
COORDINATES: similar to AA sequence:RefSeq:WP_014537475.1
GO:0016020 - membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
COORDINATES: similar to AA sequence:RefSeq:WP_015316404.1
COORDINATES: similar to AA sequence:RefSeq:WP_013894169.1
COORDINATES: protein motif:HMM:NF024934.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007880398.1
COORDINATES: similar to AA sequence:RefSeq:WP_012650523.1
COORDINATES: similar to AA sequence:RefSeq:WP_007880390.1
COORDINATES: similar to AA sequence:RefSeq:WP_018899580.1
COORDINATES: protein motif:HMM:NF015587.2
COORDINATES: similar to AA sequence:RefSeq:WP_006337090.1
COORDINATES: similar to AA sequence:RefSeq:WP_016969359.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197086.1
COORDINATES: similar to AA sequence:RefSeq:WP_013530428.1
COORDINATES: similar to AA sequence:RefSeq:WP_013530978.1
low affinity iron permease family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008874561.1
COORDINATES: similar to AA sequence:RefSeq:WP_013533227.1
COORDINATES: similar to AA sequence:RefSeq:WP_006201408.1
COORDINATES: similar to AA sequence:RefSeq:WP_032490240.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011581074.1
COORDINATES: similar to AA sequence:RefSeq:WP_010910233.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014495247.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025013.2
COORDINATES: similar to AA sequence:RefSeq:WP_017265828.1
COORDINATES: similar to AA sequence:RefSeq:WP_010910929.1
COORDINATES: similar to AA sequence:RefSeq:WP_011311876.1
alpha-ketoglutarate-dependent dioxygenase AlkB
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006332430.1
COORDINATES: similar to AA sequence:RefSeq:WP_008837636.1
COORDINATES: similar to AA sequence:RefSeq:WP_008836278.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF015060.2
COORDINATES: similar to AA sequence:RefSeq:WP_017776085.1
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: similar to AA sequence:RefSeq:WP_018116539.1
COORDINATES: similar to AA sequence:RefSeq:WP_009340162.1
COORDINATES: similar to AA sequence:RefSeq:WP_018116541.1
COORDINATES: similar to AA sequence:RefSeq:WP_008872868.1
COORDINATES: similar to AA sequence:RefSeq:WP_019173720.1
COORDINATES: similar to AA sequence:RefSeq:WP_012093330.1
COORDINATES: similar to AA sequence:RefSeq:WP_012093331.1
COORDINATES: protein motif:HMM:NF012579.2
GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO:0016301 - kinase activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611975.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017269295.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017269294.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017269293.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891264.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018085956.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013413.2
GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007437764.1
COORDINATES: similar to AA sequence:RefSeq:WP_011982997.1
COORDINATES: similar to AA sequence:RefSeq:WP_005800888.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490188.1
COORDINATES: similar to AA sequence:RefSeq:WP_013636820.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019173701.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018426842.1
COORDINATES: similar to AA sequence:RefSeq:WP_019173705.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019173706.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019173707.1
COORDINATES: similar to AA sequence:RefSeq:WP_009563408.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011747349.1
COORDINATES: similar to AA sequence:RefSeq:WP_008279305.1
GO:0047789 - creatininase activity [Evidence IEA]
GO:0046449 - creatinine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019173696.1
COORDINATES: similar to AA sequence:RefSeq:WP_007814731.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0019808 - polyamine binding [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019173694.1
COORDINATES: similar to AA sequence:RefSeq:WP_018431414.1
COORDINATES: similar to AA sequence:RefSeq:WP_019173691.1
COORDINATES: similar to AA sequence:RefSeq:WP_013689142.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019995458.1
COORDINATES: similar to AA sequence:RefSeq:WP_006204042.1
COORDINATES: similar to AA sequence:RefSeq:WP_018388307.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006935282.1
COORDINATES: similar to AA sequence:RefSeq:WP_019051801.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019566911.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003504491.1
GO:0005515 - protein binding [Evidence IEA]; GO:0008115 - sarcosine oxidase activity [Evidence IEA]
GO:1901053 - sarcosine catabolic process [Evidence IEA]
sarcosine oxidase subunit gamma family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020010180.1
COORDINATES: similar to AA sequence:RefSeq:WP_008887495.1
COORDINATES: similar to AA sequence:RefSeq:WP_006698400.1
GO:0008115 - sarcosine oxidase activity [Evidence IEA]
GO:0046653 - tetrahydrofolate metabolic process [Evidence IEA]
sarcosine oxidase subunit beta family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008887544.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018431424.1
COORDINATES: similar to AA sequence:RefSeq:WP_013104582.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046999.1
COORDINATES: similar to AA sequence:RefSeq:WP_003501032.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559864.1
COORDINATES: similar to AA sequence:RefSeq:WP_020486313.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958553.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958531.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012559847.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958533.1
VirB3 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_017969103.1
VirB4 family type IV secretion/conjugal transfer ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_012559850.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559851.1
COORDINATES: protein motif:HMM:NF016491.2
COORDINATES: similar to AA sequence:RefSeq:WP_012559854.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559855.1
P-type conjugative transfer protein VirB9
COORDINATES: similar to AA sequence:RefSeq:WP_017958541.1
COORDINATES: similar to AA sequence:RefSeq:WP_017969110.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017958543.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008878403.1
COORDINATES: similar to AA sequence:RefSeq:WP_013501982.1
COORDINATES: protein motif:HMM:NF012307.2
reverse transcriptase domain-containing protein
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_013831743.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: similar to AA sequence:RefSeq:WP_012559872.1
COORDINATES: similar to AA sequence:RefSeq:WP_003586028.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974892.1
COORDINATES: similar to AA sequence:RefSeq:WP_003523830.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006699032.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517402.1
COORDINATES: similar to AA sequence:RefSeq:WP_013845238.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_018494937.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_010974888.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011505298.1
COORDINATES: similar to AA sequence:RefSeq:WP_011993085.1
COORDINATES: similar to AA sequence:RefSeq:WP_018325591.1
COORDINATES: similar to AA sequence:RefSeq:WP_006205780.1
COORDINATES: similar to AA sequence:RefSeq:WP_006205779.1
COORDINATES: similar to AA sequence:RefSeq:WP_012564795.1
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF017832.2
COORDINATES: similar to AA sequence:RefSeq:WP_011505290.1
COORDINATES: similar to AA sequence:RefSeq:WP_012564797.1
COORDINATES: similar to AA sequence:RefSeq:WP_003525125.1
COORDINATES: similar to AA sequence:RefSeq:WP_011505288.1
DUF3991 and toprim domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003545290.1
COORDINATES: protein motif:HMM:NF024252.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017265011.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958562.1
COORDINATES: protein motif:HMM:NF036800.2
COORDINATES: similar to AA sequence:RefSeq:WP_006206492.1
COORDINATES: similar to AA sequence:RefSeq:WP_008878417.1
COORDINATES: similar to AA sequence:RefSeq:WP_010915938.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555375.1
COORDINATES: similar to AA sequence:RefSeq:WP_008878422.1
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019200234.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018431405.1
COORDINATES: similar to AA sequence:RefSeq:WP_010913848.1
COORDINATES: similar to AA sequence:RefSeq:WP_020092031.1
COORDINATES: similar to AA sequence:RefSeq:WP_019860824.1
COORDINATES: similar to AA sequence:RefSeq:WP_019860823.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019860822.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014881428.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018387324.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015411 - ABC-type taurine transporter transporter activity [Evidence IEA]; GO:0030977 - taurine binding [Evidence IEA]
GO:0015734 - taurine transport [Evidence IEA]
taurine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018387323.1
COORDINATES: similar to AA sequence:RefSeq:WP_019860816.1
COORDINATES: similar to AA sequence:RefSeq:WP_013167740.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007604345.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019860807.1
COORDINATES: similar to AA sequence:RefSeq:WP_007604348.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724379.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019860810.1
COORDINATES: similar to AA sequence:RefSeq:WP_007698349.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_013158793.1
COORDINATES: similar to AA sequence:RefSeq:WP_009209353.1
COORDINATES: similar to AA sequence:RefSeq:WP_019994485.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019860833.1
COORDINATES: similar to AA sequence:RefSeq:WP_012067188.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009340155.1
COORDINATES: similar to AA sequence:RefSeq:WP_017160334.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009340153.1
COORDINATES: similar to AA sequence:RefSeq:WP_006272798.1
GO:0009336 - sulfate adenylyltransferase complex (ATP) [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0070814 - hydrogen sulfide biosynthetic process [Evidence IEA]; GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: similar to AA sequence:RefSeq:WP_009340152.1
COORDINATES: similar to AA sequence:RefSeq:WP_011504799.1