Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.
Proteome analysis of an aerobic hyperthermophilic crenarchaeon, Aeropyrum pernix K1
Characterization of a whole set of tRNA molecules in an aerobic hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1
Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1
Submitted (14-DEC-1998) Contact:Director-General of Department of Biotechnology National Institute of Technology and Evaluation (NITE), NITE Genome Analysis Center (NGAC), Department of Biotechnology; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan URL :http://www.bio.nite.go.jp/
REFSEQ INFORMATION: The reference sequence is identical to\nBA000002.3.\n\nOn Nov 28, 2006 this sequence version replaced NC_000854.1.\nKawarabayasi, Y. is at National Institute of Advanced Industrial\nScience and Technology (AIST), Tsukuba, Ibaraki 305-8566, Japan.\n\nTanaka, T., Hino, Y., Kawarabayasi, Y. and Kikuchi, H. are original\nsubmitters.\n\nTajima, T., Sekigawa, T., Oguchi, A., Yamazaki, S., Tanikawa, S.,\nFujita, N. and Harayama S. submitted a revised version of the\ngenomic sequence with a single bp insertion and the result of\nreannotation.\n\nThe genome of A. pernix was completely re-annotated in May 2006.\nSingle nucleotide was inserted at position 941,216. Some ORFs were\nadded or modified according to the result of proteome analysis at\nNITE (Yamazaki, S. et al., Mol Cell Proteomics. 5, 811-823 (2006)).\nThe detailed process of re-annotation is described in\nhttp://www.bio.nite.go.jp/dogan/GeneralFeature?GENOME_ID=ape_G1.\n\nAll locus tags of A. pernix were replaced to new identifiers by the\nfollowing rules.\n1. Prefix 'APE' or 'APES' was replaced by 'APE_'.\n2. ORF numbers were inherited except for those with previous locus\ntag starting with 'APES'.\n3. An alphabetical character like 'a' was added after the ORF\nnumber where new ORF was inserted between existing ORFs, including\nthose with previous locus tag starting with 'APES'. 4. Version\nnumber like '.1' was added where the start position of existing ORF\nwas changed.\n\nPlease visit our web site.\nURL:http://www.bio.nite.go.jp/e/\n\nDOGAN ; Database of the Genomes Analyzed at NITE\nThe database contains genome sequence data, physical maps and the\ngenomic and proteomic data of the microorganisms analyzed.\nURL:http://www.bio.nite.go.jp/dogan/Top\n\nThe microbial strain and microbial genomic DNA clones used for the\nsequencing project are available through the NBRC.\nURL:http://www.nbrc.nite.go.jp/e/index.html.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 06/11/2023 09:32:23\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,762\nCDSs (total) :: 1,711\nGenes (coding) :: 1,706\nCDSs (with protein) :: 1,706\nGenes (RNA) :: 51\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 2\nPseudo Genes (total) :: 5\nCDSs (without protein) :: 5\nPseudo Genes (ambiguous residues) :: 0 of 5\nPseudo Genes (frameshifted) :: 0 of 5\nPseudo Genes (incomplete) :: 4 of 5\nPseudo Genes (internal stop) :: 1 of 5\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF015513.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014027429.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865431.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011838312.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865433.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012589.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012503.2
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR01685.1
COORDINATES: protein motif:HMM:NF014080.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF013491.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012609.2
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF006821.0
COORDINATES: similar to AA sequence:RefSeq:WP_013143049.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143048.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013143047.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013303172.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00975.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR00974.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865450.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006817 - phosphate ion transport [Evidence IEA]
phosphate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014010.2
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821776.1
COORDINATES: protein motif:HMM:NF012596.2
GO:0003824 - catalytic activity [Evidence IEA]
enoyl-CoA hydratase/isomerase family protein
COORDINATES: protein motif:HMM:NF012383.2
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821488.1
BMP family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF014684.2
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010865464.1
deoxyuridine 5'-triphosphate nucleotidohydrolase
COORDINATES: protein motif:HMM:NF012401.2
COORDINATES: protein motif:HMM:NF013725.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: protein motif:HMM:NF013088.2
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00177.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor biosynthesis protein B
COORDINATES: similar to AA sequence:RefSeq:WP_010865472.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020935.2
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF038032.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011838695.1
GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021461.2
COORDINATES: protein motif:HMM:NF015947.2
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013562543.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865487.1
COORDINATES: protein motif:HMM:NF014774.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF021287.2
proteasome assembly chaperone family protein
COORDINATES: protein motif:HMM:NF024851.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998203.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865498.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865499.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143772.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608884.1
COORDINATES: protein motif:HMM:NF020489.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
threonyl-tRNA synthetase editing domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010865503.1
DNA repair and recombination protein RadA
COORDINATES: similar to AA sequence:RefSeq:WP_013143778.1
COORDINATES: protein motif:HMM:NF014342.2
COORDINATES: protein motif:HMM:NF024948.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822633.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF016157.2
COORDINATES: protein motif:HMM:NF013200.2
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822188.1
COORDINATES: protein motif:HMM:NF013206.2
GO:0016787 - hydrolase activity [Evidence IEA]
gamma-glutamyltransferase family protein
COORDINATES: protein motif:HMM:NF012791.2
GO:0016208 - AMP binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014527.2
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
class I SAM-dependent rRNA methyltransferase
COORDINATES: protein motif:HMM:NF014762.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF015324.2
COORDINATES: protein motif:HMM:NF037920.2
COORDINATES: similar to AA sequence:RefSeq:WP_013562232.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865524.1
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
archaemetzincin family Zn-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_010865525.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821455.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0140078 - class I DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02928.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822074.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF013895.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014026482.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013226.2
geranylgeranylglycerol-phosphate geranylgeranyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010865537.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012908.2
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: protein motif:HMM:TIGR00636.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821599.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010865544.1
type II glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011822106.1
GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024874.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:TIGR00176.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821647.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026990.1
COORDINATES: protein motif:HMM:TIGR00251.3
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF017704.2
COORDINATES: similar to AA sequence:RefSeq:WP_012608354.1
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF027964.2
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013129002.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027108.1
COORDINATES: protein motif:HMM:TIGR00264.2
nascent polypeptide-associated complex protein
COORDINATES: protein motif:HMM:NF024629.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014001.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865568.1
Sjogren's syndrome/scleroderma autoantigen 1 family protein
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_014768149.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF013382.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865576.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143739.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865580.1
GO:0046421 - methylisocitrate lyase activity [Evidence IEA]
GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF014637.2
putative RNA uridine N3 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011839305.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865583.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865584.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822432.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF012795.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822004.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF018484.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838850.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865598.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_014025916.1
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: similar to AA sequence:RefSeq:WP_014025809.1
COORDINATES: protein motif:HMM:TIGR00423.1
COORDINATES: protein motif:HMM:NF014658.2
menaquinone biosynthetic enzyme MqnA/MqnD family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014767746.1
COORDINATES: protein motif:HMM:NF015952.2
GTP-dependent dephospho-CoA kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011839126.1
GO:0003711 - transcription elongation factor activity [Evidence IEA]
transcription elongation factor subunit Spt4
COORDINATES: protein motif:HMM:NF006333.0
COORDINATES: protein motif:HMM:NF024581.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF014628.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865610.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00857.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014026668.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026920.1
COORDINATES: protein motif:HMM:NF013481.2
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01857
archaeal-type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011822338.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:TIGR01256.1
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014025999.1
GO:0004540 - RNA nuclease activity [Evidence IEA]
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_014025998.1
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:NF025442.2
COORDINATES: similar to AA sequence:RefSeq:WP_013304428.1
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:NF023276.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865630.1
COORDINATES: protein motif:HMM:NF021634.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865623.1
COORDINATES: protein motif:HMM:NF014059.2
COORDINATES: protein motif:HMM:NF022995.2
COORDINATES: protein motif:HMM:NF024854.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF015898.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838865.1
COORDINATES: protein motif:HMM:NF024864.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821782.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737835.1
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014910.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF015297.2
GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013128895.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: protein motif:HMM:NF016816.2
COORDINATES: protein motif:HMM:NF012703.2
GO:0008783 - agmatinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013129058.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01382.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF018444.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF036688.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821587.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865670.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013927.2
COORDINATES: protein motif:HMM:NF013413.2
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: protein motif:HMM:NF015971.2
COORDINATES: protein motif:HMM:NF026221.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865678.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865679.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865680.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865681.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865682.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865683.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865684.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839323.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865686.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865687.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865688.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865689.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865690.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865691.1
COORDINATES: protein motif:HMM:NF013985.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865693.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865694.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865695.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822442.1
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822445.1
COORDINATES: protein motif:HMM:NF014040.2
GO:0004518 - nuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865700.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF006352.0
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: protein motif:HMM:NF024917.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821342.1
COORDINATES: protein motif:HMM:NF004837.0
COORDINATES: protein motif:HMM:TIGR02076.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865714.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865715.1
GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865716.1
COORDINATES: protein motif:HMM:NF014093.2
COORDINATES: protein motif:HMM:NF014092.2
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF016358.2
COORDINATES: similar to AA sequence:RefSeq:WP_013142540.1
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821607.1
COORDINATES: protein motif:HMM:TIGR03679.1
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821256.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821283.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003114.0
CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011821460.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865740.1
translation initiation factor IF-2 subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010865741.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865742.1
COORDINATES: protein motif:HMM:NF001641.0
COORDINATES: similar to AA sequence:RefSeq:WP_010865745.1
COORDINATES: protein motif:HMM:TIGR01384.1
GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF025040.2
GO:0046983 - protein dimerization activity [Evidence IEA]
RpoL/Rpb11 RNA polymerase subunit family protein
COORDINATES: protein motif:HMM:NF021368.2
COORDINATES: protein motif:HMM:NF034126.3
exosome complex RNA-binding protein Csl4
COORDINATES: protein motif:HMM:NF015559.2
COORDINATES: protein motif:HMM:TIGR00322.1
GO:0043364 - glycyl-radical enzyme activating activity [Evidence IEA]
GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013142503.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865756.1
COORDINATES: protein motif:HMM:NF015694.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822042.1
acetyl ornithine aminotransferase family protein
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: protein motif:HMM:NF040854.1
GO:0008821 - crossover junction DNA endonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123385.1
COORDINATES: protein motif:HMM:NF014610.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122992.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865779.1
COORDINATES: protein motif:HMM:NF014056.2
COORDINATES: protein motif:HMM:TIGR02668.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822603.1
COORDINATES: protein motif:HMM:NF037982.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822602.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-linked oxidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF021487.2
COORDINATES: protein motif:HMM:TIGR01064.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821273.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821682.1
COORDINATES: protein motif:HMM:NF013197.2
COORDINATES: protein motif:HMM:TIGR00729.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016164.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865794.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865795.1
COORDINATES: protein motif:HMM:NF021442.2
COORDINATES: protein motif:HMM:NF015899.2
COORDINATES: protein motif:HMM:NF016382.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865799.1
GO:0000502 - proteasome complex [Evidence IEA]
GO:0004175 - endopeptidase activity [Evidence IEA]
GO:0010498 - proteasomal protein catabolic process [Evidence IEA]
archaeal proteasome endopeptidase complex subunit beta
COORDINATES: protein motif:HMM:NF019876.2
transcription initiation factor IIB family protein
COORDINATES: protein motif:HMM:NF037134.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865802.1
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865803.1
nicotinamide-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF013362.2
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF037647.2
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865807.1
NAD(P)-dependent glycerol-1-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_010865808.1
COORDINATES: protein motif:HMM:TIGR03675.1
COORDINATES: protein motif:HMM:TIGR03684.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865811.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608960.1
COORDINATES: protein motif:HMM:NF012766.2
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015056.2
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013143.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020334.2
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838466.1
COORDINATES: protein motif:HMM:NF027889.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865825.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01213.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0031119 - tRNA pseudouridine synthesis [Evidence IEA]
tRNA pseudouridine(54/55) synthase Pus10
COORDINATES: similar to AA sequence:RefSeq:WP_010865827.1
COORDINATES: protein motif:HMM:NF016787.2
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF012797.2
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: protein motif:HMM:NF021433.2
COORDINATES: protein motif:HMM:NF014234.2
COORDINATES: protein motif:HMM:NF013939.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865838.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01356.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:TIGR01920.1
GO:0004765 - shikimate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020090.2
COORDINATES: protein motif:HMM:NF013640.2
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123576.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014798.2
transketolase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012670.2
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866012.1
COORDINATES: protein motif:HMM:NF026297.2
COORDINATES: protein motif:HMM:NF019604.2
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_014768083.1
COORDINATES: protein motif:HMM:NF014448.2
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02537.1
COORDINATES: protein motif:HMM:NF025006.2
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014736987.1
MazG nucleotide pyrophosphohydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010865869.1
GO:0047294 - phosphoglycerol geranylgeranyltransferase activity [Evidence IEA]
GO:0006650 - glycerophospholipid metabolic process [Evidence IEA]
geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase
COORDINATES: protein motif:HMM:NF016984.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865871.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01910.1
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865876.1
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865881.1
GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF015846.2
preprotein translocase subunit Sec61beta
COORDINATES: protein motif:HMM:NF020078.2
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010865887.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016330.2
COORDINATES: protein motif:HMM:TIGR00021.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00373
archaeal type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF015057.2
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865893.1
GO:0046554 - malate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF004434.0
COORDINATES: protein motif:HMM:NF012382.2
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013304337.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865897.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:TIGR00745.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027499.1
COORDINATES: protein motif:HMM:NF025819.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821867.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822333.1
COORDINATES: protein motif:HMM:TIGR01491.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014076.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865906.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123206.1
COORDINATES: protein motif:HMM:NF012652.2
type II/IV secretion system ATPase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010865912.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822722.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822127.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865916.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF041018.1
GO:0043795 - glyceraldehyde oxidoreductase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
glyceraldehyde dehydrogenase subunit alpha
COORDINATES: protein motif:HMM:NF009787.0
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839092.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014443.2
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028105.2
COORDINATES: protein motif:HMM:NF020897.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865819.1
COORDINATES: protein motif:HMM:NF039183.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865944.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839412.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF026240.2
COORDINATES: protein motif:HMM:NF016842.2
GO:0030674 - protein-macromolecule adaptor activity [Evidence IEA]; GO:0043023 - ribosomal large subunit binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865948.1
COORDINATES: protein motif:HMM:NF013341.2
COORDINATES: similar to AA sequence:RefSeq:WP_011839394.1
COORDINATES: protein motif:HMM:NF015411.2
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014026013.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026012.1
COORDINATES: protein motif:HMM:NF013530.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:TIGR01487.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865958.1
COORDINATES: protein motif:HMM:NF006422.0
bifunctional phosphoglucose/phosphomannose isomerase
COORDINATES: protein motif:HMM:NF016048.2
COORDINATES: protein motif:HMM:NF014032.2
GO:0048500 - signal recognition particle [Evidence IEA]
GO:0008312 - 7S RNA binding [Evidence IEA]
GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
signal recognition particle subunit SRP19/SEC65 family protein
COORDINATES: protein motif:HMM:TIGR02187.1
COORDINATES: protein motif:HMM:NF012376.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015239.2
GO:0017111 - ribonucleoside triphosphate phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00308.1
GO:0004809 - tRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO:0030488 - tRNA methylation [Evidence IEA]
tRNA (guanine(10)-N(2))-dimethyltransferase
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821334.1
GO:0031429 - box H/ACA snoRNP complex [Evidence IEA]
GO:0034513 - box H/ACA snoRNA binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]; GO:0000454 - snoRNA guided rRNA pseudouridine synthesis [Evidence IEA]; GO:0031120 - snRNA pseudouridine synthesis [Evidence IEA]
H/ACA ribonucleoprotein complex subunit GAR1
COORDINATES: protein motif:HMM:NF012600.2
COORDINATES: protein motif:HMM:NF014041.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865975.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF010340.0
COORDINATES: protein motif:HMM:TIGR02866.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012343.2
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:NF015582.2
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF015946.2
tRNA (pseudouridine-N1)-methyltransferase
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF014077.2
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0106411 - XMP 5'-nucleosidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01236.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]
GO:0006562 - proline catabolic process [Evidence IEA]
L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_010865989.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737335.1
COORDINATES: similar to AA sequence:RefSeq:WP_014025689.1
class I SAM-dependent methyltransferase family protein
COORDINATES: protein motif:HMM:NF003267.0
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: similar to AA sequence:RefSeq:WP_010865847.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866016.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866015.1
COORDINATES: similar to AA sequence:RefSeq:WP_013129745.1
COORDINATES: similar to AA sequence:RefSeq:WP_013129746.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014737305.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866278.1
COORDINATES: protein motif:HMM:TIGR01486.1
GO:0050531 - mannosyl-3-phosphoglycerate phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02460.1
GO:0050504 - mannosyl-3-phosphoglycerate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866051.1
COORDINATES: protein motif:HMM:NF017262.2
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: similar to AA sequence:RefSeq:WP_013562455.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822366.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866061.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF002207.0
COORDINATES: protein motif:HMM:NF014476.2
COORDINATES: protein motif:HMM:NF013275.2
COORDINATES: similar to AA sequence:RefSeq:WP_013304195.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194620.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_018193868.1
COORDINATES: similar to AA sequence:RefSeq:WP_018193867.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: protein motif:HMM:TIGR00522.1
GO:0004164 - diphthine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013562476.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF009409.0
COORDINATES: protein motif:HMM:NF016352.2
COORDINATES: protein motif:HMM:NF024808.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0019808 - polyamine binding [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF009226.0
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF013307.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821344.1
succinate dehydrogenase, cytochrome b556 subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018194424.1
succinate dehydrogenase/fumarate reductase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010866089.1
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: protein motif:HMM:NF012441.2
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]
orotidine 5'-phosphate decarboxylase / HUMPS family protein
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: protein motif:HMM:NF003270.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0000014 - single-stranded DNA endodeoxyribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821277.1
GO:0000398 - mRNA splicing, via spliceosome [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA]
U6 snRNA-associated Sm-like protein LSm6
COORDINATES: similar to AA sequence:RefSeq:WP_011998239.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013303974.1
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF018349.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026759.1
COORDINATES: protein motif:HMM:NF015409.2
COORDINATES: protein motif:HMM:NF021475.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866109.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866110.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866111.1
COORDINATES: protein motif:HMM:NF013584.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822472.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866115.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026850.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0009231 - riboflavin biosynthetic process [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013142645.1
GO:0004746 - riboflavin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013302677.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839337.1
RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
COORDINATES: similar to AA sequence:RefSeq:WP_014737991.1
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: protein motif:HMM:NF021134.2
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: similar to AA sequence:RefSeq:WP_014766860.1
RPA12/RPB9/RPC11 RNA polymerase family protein
COORDINATES: protein motif:HMM:NF015960.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866130.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF019407.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866133.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012904.2
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822415.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737491.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018410.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821699.1
COORDINATES: protein motif:HMM:NF002322.0
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821580.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142949.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014025572.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821392.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013562578.1
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013303868.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF014990.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866162.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866163.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866164.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866165.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866166.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866167.1
COORDINATES: protein motif:HMM:NF014087.2
COORDINATES: protein motif:HMM:NF015965.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866170.1
COORDINATES: protein motif:HMM:NF028455.2
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027296.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: protein motif:HMM:TIGR00501.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866178.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608915.1
ribosome biogenesis/translation initiation ATPase RLI
COORDINATES: protein motif:HMM:NF019075.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866182.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866183.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866184.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866185.1
GO:0061711 - N(6)-L-threonylcarbamoyladenine synthase activity [Evidence IEA]
KEOPS complex N(6)-L-threonylcarbamoyladenine synthase Kae1
COORDINATES: protein motif:HMM:TIGR03724.2
COORDINATES: similar to AA sequence:RefSeq:WP_013303561.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866188.1
COORDINATES: protein motif:HMM:TIGR00657.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012122898.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012945.2
COORDINATES: protein motif:HMM:NF011470.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866194.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821611.1
COORDINATES: protein motif:HMM:NF014013.2
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013143902.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866199.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838637.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026223.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013129428.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014736855.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014736856.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase
COORDINATES: protein motif:HMM:NF013799.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF025025.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF016908.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_011839730.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866220.1
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822643.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866222.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013142794.1
COORDINATES: protein motif:HMM:TIGR03992.1
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866225.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF014790.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013303274.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF024058.2
COORDINATES: protein motif:HMM:NF012512.2
PLP-dependent cysteine synthase family protein
COORDINATES: protein motif:HMM:NF013237.2
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01877.1
GO:0004521 - RNA endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01914.1
GO:0003674 - molecular_function [Evidence IEA]
type I-A CRISPR-associated protein Cas8a2/Csa4
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01874.1
type I-A CRISPR-associated protein Cas5a
COORDINATES: protein motif:HMM:TIGR02583.1
type I-A CRISPR-associated protein Cas7/Csa2
COORDINATES: protein motif:HMM:TIGR01884.1
CRISPR-associated transcriptional regulator Csa3
COORDINATES: similar to AA sequence:RefSeq:WP_010866252.1
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - DNA endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017803.2
type I-A CRISPR-associated protein Cas4/Csa1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_014737839.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF013695.2
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF012607.2
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014021.2
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: similar to AA sequence:RefSeq:WP_013303666.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866270.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866274.1
COORDINATES: protein motif:HMM:NF013989.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866043.1
COORDINATES: protein motif:HMM:NF039904.1
COORDINATES: protein motif:HMM:TIGR01580.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01660.1
COORDINATES: protein motif:HMM:TIGR03477.1
ethylbenzene dehydrogenase-related protein
COORDINATES: protein motif:HMM:TIGR00684.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051131 - chaperone-mediated protein complex assembly [Evidence IEA]
nitrate reductase molybdenum cofactor assembly chaperone
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012711.2
class I adenylate-forming enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014026589.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562466.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839703.1
GO:0003676 - nucleic acid binding [Evidence IEA]
OB-fold nucleic acid binding domain-containing protein
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822341.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010867066.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010867067.1
hydantoinase B/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF015925.2
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: protein motif:HMM:TIGR01054.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866318.1
cyclic pyranopterin monophosphate synthase MoaC
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017017.2
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866328.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014025936.1
COORDINATES: protein motif:HMM:NF024592.2
COORDINATES: protein motif:HMM:NF014218.2
NCS1 family nucleobase:cation symporter-1
COORDINATES: protein motif:HMM:NF013424.2
undecaprenyl diphosphate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866338.1
COORDINATES: protein motif:HMM:NF018024.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821786.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838648.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142790.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142791.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838645.1
COORDINATES: protein motif:HMM:NF012497.2
COORDINATES: protein motif:HMM:NF016131.2
formate dehydrogenase accessory protein FdhE
COORDINATES: protein motif:HMM:NF004445.0
NADH-quinone oxidoreductase subunit NuoN
COORDINATES: protein motif:HMM:NF012581.2
COORDINATES: protein motif:HMM:NF012636.2
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: protein motif:HMM:NF004546.0
NADH-quinone oxidoreductase subunit NuoI
COORDINATES: protein motif:HMM:NF004741.0
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: similar to AA sequence:RefSeq:WP_014027494.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: similar to AA sequence:RefSeq:WP_014025587.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF004729.0
COORDINATES: similar to AA sequence:RefSeq:WP_010866365.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014027325.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_010866369.1
COORDINATES: protein motif:HMM:NF013117.2
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF016166.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866374.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866375.1
GO:0000178 - exosome (RNase complex) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866376.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866377.1
exosome complex RNA-binding protein Rrp4
COORDINATES: similar to AA sequence:RefSeq:WP_010866378.1
archaeal proteasome endopeptidase complex subunit alpha
COORDINATES: protein motif:HMM:NF013993.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013994.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866381.1
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012436.2
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02053.1
GO:0016152 - mercury (II) reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822487.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IEA]
COORDINATES: protein motif:HMM:NF010662.0
[LysW]-aminoadipate/[LysW]-glutamate kinase
COORDINATES: similar to AA sequence:RefSeq:WP_010866387.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013304200.1
GO:0006526 - arginine biosynthetic process [Evidence IEA]; GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IEA]
alpha-aminoadipate/glutamate carrier protein LysW/ArgW
COORDINATES: protein motif:HMM:TIGR02144.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866390.1
COORDINATES: protein motif:HMM:TIGR01902.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866392.1
COORDINATES: protein motif:HMM:NF025842.2
NADPH-dependent 7-cyano-7-deazaguanine reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013130123.1
GO:0018491 - 2-oxobutyrate synthase activity [Evidence IEA]; GO:0047553 - 2-oxoglutarate synthase activity [Evidence IEA]; GO:0019164 - pyruvate synthase activity [Evidence IEA]
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: protein motif:HMM:TIGR03710.1
2-oxoacid:ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF015889.2
COORDINATES: protein motif:HMM:NF016013.2
COORDINATES: protein motif:HMM:NF003072.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194627.1
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822590.1
COORDINATES: protein motif:HMM:NF024638.2
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:NF014641.2
GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IEA]
GO:0006782 - protoporphyrinogen IX biosynthetic process [Evidence IEA]; GO:0006780 - uroporphyrinogen III biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012472.2
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821312.1
ribbon-helix-helix domain-containing protein
COORDINATES: protein motif:HMM:NF037131.2
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR01127.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013304392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027134.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866413.1
COORDINATES: protein motif:HMM:NF012690.2
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:NF020133.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF013250.2
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123017.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822281.1
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_010866423.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866424.1
COORDINATES: protein motif:HMM:NF040950.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014026389.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822253.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010866430.1
translation initiation factor IF-2 subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014737150.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866433.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016982.2
tRNA(Met) cytidine acetyltransferase TmcA
COORDINATES: protein motif:HMM:NF017957.2
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF012861.2
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012335.2
COORDINATES: protein motif:HMM:NF025696.2
COORDINATES: protein motif:HMM:NF027117.2
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF020917.2
CDGSH iron-sulfur domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561740.1
COORDINATES: protein motif:HMM:NF003345.0
COORDINATES: protein motif:HMM:TIGR01209.1
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822629.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866457.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821993.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143420.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866473.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866474.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866477.1
COORDINATES: protein motif:HMM:NF016219.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821266.1
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866481.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01460.1
COORDINATES: protein motif:HMM:NF041120.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866489.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_018194296.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018194306.1
COORDINATES: protein motif:HMM:NF018285.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866496.1
stress response translation initiation inhibitor YciH
COORDINATES: similar to AA sequence:RefSeq:WP_013142845.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821500.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838605.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865446.1
COORDINATES: protein motif:HMM:TIGR01230.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866503.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866506.1
GO:0000214 - tRNA-intron endonuclease complex [Evidence IEA]
GO:0000213 - tRNA-intron endonuclease activity [Evidence IEA]
GO:0006388 - tRNA splicing, via endonucleolytic cleavage and ligation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866507.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866508.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998664.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026122.1
TIGR04053 family radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014737707.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194791.1
GO:0120225 - coenzyme A binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866515.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866516.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010866517.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014026228.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027054.1
GO:0010038 - response to metal ion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01350.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018194530.1
dihydrolipoamide acetyltransferase family protein
COORDINATES: protein motif:HMM:NF006667.0
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:TIGR03181.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: protein motif:HMM:TIGR00750.1
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:TIGR00640.1
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018036474.1
COORDINATES: protein motif:HMM:NF015690.2
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866532.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014665.2
GO:0006784 - heme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866535.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:NF021571.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821703.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011838420.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:NF024804.2
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF012506.2
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: protein motif:HMM:NF013991.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046917 - triphosphoribosyl-dephospho-CoA synthase activity [Evidence IEA]
triphosphoribosyl-dephospho-CoA synthase
aspartyl/glutamyl-tRNA amidotransferase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_010866548.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866549.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF012344.2
COORDINATES: protein motif:HMM:NF016221.2
GO:0016531 - copper chaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013742.2
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012575.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025016.2
cytochrome bc complex cytochrome b subunit
COORDINATES: protein motif:HMM:NF011480.0
vitamin K epoxide reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821261.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821498.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866563.1
signal recognition particle protein Srp54
COORDINATES: similar to AA sequence:RefSeq:WP_010866564.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866565.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027504.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866567.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866568.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866569.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839110.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866571.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866572.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866573.1
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: protein motif:HMM:NF012488.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010866576.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866577.1
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: protein motif:HMM:NF021417.2
COORDINATES: protein motif:HMM:NF012568.2
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866581.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:NF012899.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866584.1
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839876.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839169.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866589.1
GO:0017136 - NAD-dependent histone deacetylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011838388.1
GO:0008886 - glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity [Evidence IEA]
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:TIGR03671.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821573.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004438.0
GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02228.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014026349.1
phenylalanine--tRNA ligase beta subunit-related protein
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822152.1
COORDINATES: protein motif:HMM:NF015428.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866604.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866605.1
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:NF021347.2
COORDINATES: protein motif:HMM:NF014912.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012432.2
COORDINATES: protein motif:HMM:NF021562.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866613.1
COORDINATES: protein motif:HMM:NF013322.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866616.1
GO:0006325 - chromatin organization [Evidence IEA]
COORDINATES: protein motif:HMM:NF017380.2
COORDINATES: similar to AA sequence:RefSeq:WP_013130044.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822581.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866622.1
GO:0047964 - glyoxylate reductase (NAD+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866624.1
COORDINATES: protein motif:HMM:TIGR01251.1
GO:0002189 - ribose phosphate diphosphokinase complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01177.1
COORDINATES: protein motif:HMM:TIGR02651.1
GO:0016891 - RNA endonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866630.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866631.1
translation elongation factor EF-1 subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010866632.1
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: similar to AA sequence:RefSeq:WP_012609037.1
COORDINATES: protein motif:HMM:TIGR01952.1
NusA-like transcription termination signal-binding factor
COORDINATES: similar to AA sequence:RefSeq:WP_010866636.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866637.1
COORDINATES: similar to AA sequence:RefSeq:WP_014768221.1
COORDINATES: similar to AA sequence:RefSeq:WP_014025769.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866640.1
COORDINATES: protein motif:HMM:TIGR00024.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866642.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822031.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143513.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF021528.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866648.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
hydroxymethylglutaryl-CoA reductase (NADPH)
COORDINATES: similar to AA sequence:RefSeq:WP_011822669.1
COORDINATES: protein motif:HMM:NF012336.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866651.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821464.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027071.1
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:TIGR01473.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866659.1
L-fucose/L-arabinose isomerase family protein
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: similar to AA sequence:RefSeq:WP_013304008.1
amino acid ABC transporter ATP-binding protein
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: protein motif:HMM:NF025210.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013130062.1
COORDINATES: protein motif:HMM:NF004723.0
COORDINATES: protein motif:HMM:NF014028.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866674.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866675.1
COORDINATES: protein motif:HMM:NF006326.0
COORDINATES: nucleotide motif:Rfam:14.4:RF02540
COORDINATES: nucleotide motif:Rfam:14.4:RF01959
COORDINATES: similar to AA sequence:RefSeq:WP_011839664.1
phosphopantothenate/pantothenate synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_010866689.1
GO:0043800 - hexulose-6-phosphate isomerase activity [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00310.1
ZPR1 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014027027.1
COORDINATES: protein motif:HMM:NF041080.1
GO:0016628 - oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [Evidence IEA]
digeranylgeranylglycerophospholipid reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013302948.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866702.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_011821969.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866705.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013129862.1
COORDINATES: protein motif:HMM:NF009007.0
COORDINATES: similar to AA sequence:RefSeq:WP_013129398.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866715.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822400.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866719.1
nicotinamide mononucleotide deamidase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866723.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866724.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866726.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:NF016765.2
COORDINATES: protein motif:HMM:NF021421.2
COORDINATES: similar to AA sequence:RefSeq:WP_013130148.1
COORDINATES: protein motif:HMM:NF014102.2
TFIIB-type zinc ribbon-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866734.1
catalyzes the S-adenosyl-methionine-dependent 2'-O-ribose methylation of C56 in tRNA transcripts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:TIGR00270.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866737.1
COORDINATES: protein motif:HMM:NF028302.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866739.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
tRNA guanosine(15) transglycosylase TgtA
COORDINATES: protein motif:HMM:NF026160.2
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026258.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866747.1
COORDINATES: protein motif:HMM:NF014060.2
GO:0043755 - alpha-ribazole phosphatase activity [Evidence IEA]
nucleoside triphosphate--adenosylcobinamide-phosphate guanylyltransferase
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014685.2
GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]; GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF002281.0
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014015.2
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866756.1
COORDINATES: protein motif:HMM:NF013847.2
methylcobalamin--homocysteine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013143468.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026962.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026430.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822023.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_010866767.1
COORDINATES: protein motif:HMM:NF002288.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0006566 - threonine metabolic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010866775.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866776.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839181.1
COORDINATES: protein motif:HMM:NF006351.0
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866780.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302880.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866784.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821286.1
COORDINATES: protein motif:HMM:NF016310.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866788.1
COORDINATES: protein motif:HMM:NF014299.2
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866793.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866794.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027253.1
COORDINATES: similar to AA sequence:RefSeq:WP_013128966.1
COORDINATES: similar to AA sequence:RefSeq:WP_013129600.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026891.1
COORDINATES: protein motif:HMM:TIGR04013.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
TIGR04013 family B12-binding domain/radical SAM domain-containing protein
COORDINATES: protein motif:HMM:TIGR00697.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866802.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866807.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_010866808.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_013303790.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822148.1
COORDINATES: protein motif:HMM:NF020479.2
COORDINATES: protein motif:HMM:NF012428.2
COORDINATES: protein motif:HMM:TIGR02123.1
COORDINATES: protein motif:HMM:TIGR02122.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014767256.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866827.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR00653.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014737824.1
COORDINATES: protein motif:HMM:NF015905.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866823.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
sulfide-dependent adenosine diphosphate thiazole synthase
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822174.1
COORDINATES: protein motif:HMM:TIGR01912.1
GO:0033281 - TAT protein transport complex [Evidence IEA]
GO:0043953 - protein transport by the Tat complex [Evidence IEA]
Sec-independent protein translocase TatC
COORDINATES: protein motif:HMM:NF014470.2
COORDINATES: protein motif:HMM:NF024700.2
energy-coupling factor ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_018194626.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821980.1
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822744.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866840.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026535.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866842.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822742.1
binds directly to 23S ribosomal RNA; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00405.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866845.1
GO:0006886 - intracellular protein transport [Evidence IEA]
protein translocase SEC61 complex subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_011822305.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822553.1
COORDINATES: protein motif:HMM:NF002218.0
COORDINATES: similar to AA sequence:RefSeq:WP_014027169.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866856.1
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014002.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866858.1
fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011821225.1
functions along with aFIB and aL7a; guides 2'-O-methylation of ribose to specific sites in RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010866860.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608486.1
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Glu-tRNA(Gln) amidotransferase subunit GatD
COORDINATES: similar to AA sequence:RefSeq:WP_010866862.1
Glu-tRNA(Gln) amidotransferase subunit GatE
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998567.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:NF013923.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF041019.1
glyceraldehyde dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: protein motif:HMM:NF012364.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF013999.2
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: protein motif:HMM:NF014316.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838580.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013143027.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026428.1
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: protein motif:HMM:TIGR02619.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303146.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303145.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562084.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562085.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026340.1
COORDINATES: protein motif:HMM:TIGR00903.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027089.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866908.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: protein motif:HMM:NF017200.2
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: protein motif:HMM:NF016811.2
COORDINATES: similar to AA sequence:RefSeq:WP_014027130.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012608468.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143696.1
COORDINATES: protein motif:HMM:NF017051.2
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866923.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_014026914.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866925.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00471.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00294.2
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866934.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010866935.1
COORDINATES: protein motif:HMM:NF003326.0
COORDINATES: protein motif:HMM:NF033412.1
COORDINATES: protein motif:HMM:NF004888.0
produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010866941.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839164.1
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: protein motif:HMM:NF016085.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822763.1
COORDINATES: protein motif:HMM:NF014003.2
S-adenosyl-l-methionine hydroxide adenosyltransferase family protein
COORDINATES: protein motif:HMM:NF015084.2
biotin/lipoate A/B protein ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866954.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866956.1
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011821257.1
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF024423.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF037434.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866968.1
translation initiation factor IF-2 subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_010866969.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866970.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866971.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013933.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866973.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866974.1
COORDINATES: protein motif:HMM:NF014697.2
COORDINATES: protein motif:HMM:NF004722.0
COORDINATES: similar to AA sequence:RefSeq:WP_020269164.1
COORDINATES: protein motif:HMM:NF013920.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026838.1
COORDINATES: similar to AA sequence:RefSeq:WP_012607710.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013562076.1
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF021060.2
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822727.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: protein motif:HMM:NF011161.0
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014923.2
COORDINATES: protein motif:HMM:NF014877.2
phosphopentomutase/phosphoglucosamine mutase
COORDINATES: protein motif:HMM:NF021490.2
COORDINATES: protein motif:HMM:TIGR00126.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00284.1
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017019.2
COORDINATES: protein motif:HMM:TIGR00259.1
COORDINATES: protein motif:HMM:NF013079.2
COORDINATES: similar to AA sequence:RefSeq:WP_010867015.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839555.1
COORDINATES: protein motif:HMM:NF014325.2
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010867019.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017038.2
COORDINATES: similar to AA sequence:RefSeq:WP_010867022.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839254.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026575.1
COORDINATES: protein motif:HMM:NF013323.2
acyl CoA:acetate/3-ketoacid CoA transferase
COORDINATES: protein motif:HMM:NF006813.0
COORDINATES: similar to AA sequence:RefSeq:WP_013142421.1
COORDINATES: similar to AA sequence:RefSeq:WP_010867035.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562617.1
COORDINATES: similar to AA sequence:RefSeq:WP_014025782.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: protein motif:HMM:NF020287.2
COORDINATES: protein motif:HMM:NF015213.2
COORDINATES: similar to AA sequence:RefSeq:WP_013129371.1
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: protein motif:HMM:TIGR00427.1
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838973.1
COORDINATES: protein motif:HMM:NF014795.2
COORDINATES: protein motif:HMM:TIGR01188.1
daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: protein motif:HMM:NF036686.2
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: protein motif:HMM:NF024825.2
COORDINATES: similar to AA sequence:RefSeq:WP_014737755.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737754.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866305.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822757.1
COORDINATES: protein motif:HMM:NF015168.2
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822485.1
GO:0015297 - antiporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015999.2
COORDINATES: protein motif:HMM:NF018513.2
COORDINATES: protein motif:HMM:NF028178.2
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012444.2
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: similar to AA sequence:RefSeq:WP_010867078.1
COORDINATES: similar to AA sequence:RefSeq:WP_010867079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027355.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010867081.1
anthranilate synthase component I family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014026580.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]; GO:0004049 - anthranilate synthase activity [Evidence IEA]
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:TIGR02693.1
GO:0050611 - arsenate reductase (azurin) activity [Evidence IEA]
arsenate reductase (azurin) large subunit
COORDINATES: protein motif:HMM:TIGR02694.1
arsenate reductase (azurin) small subunit
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:TIGR01512.1
COORDINATES: protein motif:HMM:NF013756.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839807.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_014026416.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026415.1
COORDINATES: similar to AA sequence:RefSeq:WP_018193449.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839087.1
COORDINATES: protein motif:HMM:NF039614.1
dimethylarginine dimethylaminohydrolase family protein
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024644.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015851.2
NrfD/PsrC family molybdoenzyme membrane anchor subunit
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:NF014651.2
COORDINATES: protein motif:HMM:NF014439.2
COORDINATES: protein motif:HMM:NF014037.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016167.2