Candidatus Rhabdochlamydia oedothoracis isolate W744xW776 plasmid unnamed, complete sequence.
type: Entry
definition: Candidatus Rhabdochlamydia oedothoracis isolate W744xW776 plasmid unnamed, complete sequence.
sequence version: NZ_CP075588.1
sequence date: 2023-05-03
sequence: sequence
division: CON
label: NZ_CP075588.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN14391954
keyword: RefSeq
source: Candidatus Rhabdochlamydia oedothoracis
organism: Candidatus Rhabdochlamydia oedothoracis
taxonomy: Bacteria; Chlamydiota; Chlamydiia; Parachlamydiales; Rhabdochlamydiaceae; Candidatus Rhabdochlamydia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP075588.1.\nBacteria and source DNA available from Frederik Hendrickx, Royal\nBelgian Institute of Natural Sciences, Brussels, Belgium.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 21-MAY-2020\nAssembly Method :: Unicycler v. v0.4.6\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 152.0x\nSequencing Technology :: PacBio; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/01/2023 04:30:14\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,105\nCDSs (total) :: 2,059\nGenes (coding) :: 1,785\nCDSs (with protein) :: 1,785\nGenes (RNA) :: 46\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 37\nncRNAs :: 3\nPseudo Genes (total) :: 274\nCDSs (without protein) :: 274\nPseudo Genes (ambiguous residues) :: 0 of 274\nPseudo Genes (frameshifted) :: 101 of 274\nPseudo Genes (incomplete) :: 236 of 274\nPseudo Genes (internal stop) :: 78 of 274\nPseudo Genes (multiple problems) :: 119 of 274\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 38901
topology: circular
so has quality: SO_0000988
location: 1..38901
location: region:1-38901:1
RO_0002162: 2720720

NZ_CP075588
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN14391954
type: BioSample
SIO_000068: biosample

1
title: Ecology and evolution of chlamydial symbionts of arthropods
author: Halter, T.
author: Koestlbacher, S.
author: Collingro, A.
author: Sixt, B.S.
author: Toenshoff, E.R.
author: Hendrickx, F.
author: Kostanjsek, R.
author: Horn, M.
journal: bioRxiv (2022)

2
title: Direct Submission
author: Halter, T.
author: Sixt, B.S.
author: Toenshoff, E.R.
author: Koestlbacher, S.
author: Schulz, F.
author: Kostanjsek, R.
author: Collingro, A.
author: Hendrickx, F.
author: Horn, M.
journal: Submitted (19-MAY-2021) Division of Microbial Ecology, Centre for Microbiology and Environmental Systems Science, Althanstrasse 14, Vienna, Vienna 1090, Austria

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38901:1
position: 38901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-38901:1:source
so part of: sequence
organism: Candidatus Rhabdochlamydia oedothoracis
mol type: genomic DNA
isolate: W744xW776
isolation source: Offspring from female W744 and male W776
host: Oedothorax gibbosus
plasmid: unnamed
country: Belgium: Walenbos forest, Tielt-Winge
lat lon: 50.924 N 4.867 E
collection date: 2013-10

2720720
type: Taxonomy
SIO_000068: taxonomy

RHABOEDO_RS10385
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10385
old locus tag: RHABOEDO_001863
so part of: sequence
location: complement(397..1434)
location: region:397-1434:-1
so has part: feature:397-1434:-1:exon
subclass of: SO_0000010

position:397:-1
position: 397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434:-1
position: 1434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397-1434:-1:exon

RHABOEDO_RS10385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10385
old locus tag: RHABOEDO_001863
inference: COORDINATES: protein motif:HMM:NF017003.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lpg1974 family pore-forming outer membrane protein
translation: MQSLFLYKHLKYFILNLCAIPIMTNAGEFHGHLEECCDVLLVKNPETQQNIVVDYLLFRAIEDTLKYGETNFRLIPPPSHDIEQDFSYNPGIRVTLNIPTYDYWLLSGSCTYFRADPSRVTSDDPTGNIFANLVAPTYFSPVNQQVSHLSGKWELKMQIFDVLFKKGLMIGKSFIIEPFFGVQGCTIKQKVDVHYTFFKPRTSLRPPQSVKGISRVSGVGPELGAEFRMVFPYRISLFARGGFSCLLGSFKGHTDYGDLLGCSSSSTQISLKDHKLRLFSSMLLQIALSKWWCTSRSSELELTLGWETQIWSRQMRMNWFSTLASPSEGSDLTLHGPFVRFSLSF
SIO_010081: RHABOEDO_RS10385
subclass of: SO_0000673
so part of: RHABOEDO_RS10385
location: complement(397..1434)
location: region:397-1434:-1
so has part: feature:397-1434:-1:exon

WP_220017915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397-1434:-1:exon

RHABOEDO_RS10390
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10390
old locus tag: RHABOEDO_001864
so part of: sequence
location: 1665..3026
location: region:1665-3026:1
so has part: feature:1665-3026:1:exon
subclass of: SO_0000010

position:1665:1
position: 1665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3026:1
position: 3026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1665-3026:1:exon

RHABOEDO_RS10390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10390
old locus tag: RHABOEDO_001864
inference: COORDINATES: protein motif:HMM:NF024872.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTRQSYLILLPHGRNLRPLQDKFYEIGGFYNGIGYVFPFQKEQTLKQIIKHLPDIKIRKIDLEDDHTFDSIRQAHNASYFRDKLFTLDHKILSIIHTYQLDELSEISVESLQLPPEQKTQFLELIQEKEKLKRALEWAEGMEKTLSSQKLISFQMKFISEQSVNFLLKEAPKMPRLINYMEGSYVKAFIRKGIVGMLVGSGGVGKTHALAQLAISITTGIPWLGKYPVEKTGYVFMGMGENSEEDIHRLLRKTVKKLFREQTSFFDKNPLLEASTRLAVASFNGLDSSFIYKGKPTQAYELLLQELKEKEPKEGWSCIILDPISRFLGADAETDNASATRFIALLERLTLELEGHPTVLFGHHMSKNAQAARNTDQGAARGSSAITDGVRWQANLEKIRKTLNSEEEEYELDQIILRYVKSNFTAILPSLRLKKDEDGILFAQDPNQSIFKKR
SIO_010081: RHABOEDO_RS10390
subclass of: SO_0000673
so part of: RHABOEDO_RS10390
location: 1665..3026
location: region:1665-3026:1
so has part: feature:1665-3026:1:exon

WP_215217047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1665-3026:1:exon

RHABOEDO_RS10395
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10395
old locus tag: RHABOEDO_001865
so part of: sequence
location: 3023..4426
location: region:3023-4426:1
so has part: feature:3023-4426:1:exon
subclass of: SO_0000010

position:3023:1
position: 3023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4426:1
position: 4426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3023-4426:1:exon

RHABOEDO_RS10395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10395
old locus tag: RHABOEDO_001865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEKTQPSKEVVMDSCSADKDFFPEEDWGNINAEQVLSFTTEDVKTLRQFPFIDQALVEDFFKKLKKPQERDLKWKDFLKSNPSKKQKEEWLEKNAKCKSIEESIKELNFLKYITENRTQIIQWLESEEKSNTFKKSGHLVDQQLKYLKSTEDPLHIFSLIENIELKNNITQNKEIQEQTIQVGIHLTAAEDRLVNALCRLLHEKSQIFNPSQSNYYTGNSSYTIADYGKKEEKIPSLILEPHELYQAYLEKVDFSGKEISNIEDILEKAQNARHLIIYEWRTKNKTGRIVVDRIEQYQPLFLVDRIFSSMSEEEADLVAHGDTEVRRKKGKFLIKFNPLFIHQIESKYVLYPKDIHQRMAKAAGGDPRKVTSAMNSLRDFCLRALSNKQKKIELNQDTLPLLLKLENYIKSGRKKEILKKVTDSFQVCKNIGLIDRWEEKAGTNNQTKYVIYLNPGFLGNNYTQIS
SIO_010081: RHABOEDO_RS10395
subclass of: SO_0000673
so part of: RHABOEDO_RS10395
location: 3023..4426
location: region:3023-4426:1
so has part: feature:3023-4426:1:exon

WP_215217046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3023-4426:1:exon

RHABOEDO_RS10400
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10400
old locus tag: RHABOEDO_001866
so part of: sequence
location: complement(4639..4788)
location: region:4639-4788:-1
so has part: feature:4639-4788:-1:exon
subclass of: SO_0000010

position:4639:-1
position: 4639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4788:-1
position: 4788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4639-4788:-1:exon

RHABOEDO_RS10400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10400
old locus tag: RHABOEDO_001866
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQRERNRIDSEIGTALLNIEEISDEEIEDSREFLTAVAKLPRLLRPTG
SIO_010081: RHABOEDO_RS10400
subclass of: SO_0000673
so part of: RHABOEDO_RS10400
location: complement(4639..4788)
location: region:4639-4788:-1
so has part: feature:4639-4788:-1:exon

WP_215217045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4639-4788:-1:exon

RHABOEDO_RS10405
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10405
old locus tag: RHABOEDO_001867
so part of: sequence
location: complement(4785..5030)
location: region:4785-5030:-1
so has part: feature:4785-5030:-1:exon
subclass of: SO_0000010

position:4785:-1
position: 4785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5030:-1
position: 5030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4785-5030:-1:exon

RHABOEDO_RS10405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10405
old locus tag: RHABOEDO_001867
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILQTIRTCLPEGVRTDQQDLLIGDTCLALTDKEREEIENLNFENYQYNSPQRAEVSARVADAAYKGQLVGAAKGAAVSTR
SIO_010081: RHABOEDO_RS10405
subclass of: SO_0000673
so part of: RHABOEDO_RS10405
location: complement(4785..5030)
location: region:4785-5030:-1
so has part: feature:4785-5030:-1:exon

WP_215217044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4785-5030:-1:exon

RHABOEDO_RS10410
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10410
old locus tag: RHABOEDO_001868
so part of: sequence
location: complement(5078..5611)
location: region:5078-5611:-1
so has part: feature:5078-5611:-1:exon
subclass of: SO_0000010

position:5078:-1
position: 5078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5611:-1
position: 5611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5078-5611:-1:exon

RHABOEDO_RS10410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10410
old locus tag: RHABOEDO_001868
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPREFADADYERTKRIVFADKPRPFAEIKQEVLGYSEWDLMSWGTRLEKKYIELYSDPEFRKAKAKEYADRRYNPQNEQENEEEWLVLSFCKQELHDLYRKEPKYLDTRHIDLWIINGHNKAALAQHRKEWDKLTPSEKVEKIFGKRDKYEVSAAVATAASCFFLCHAMYQYLSSQR
SIO_010081: RHABOEDO_RS10410
subclass of: SO_0000673
so part of: RHABOEDO_RS10410
location: complement(5078..5611)
location: region:5078-5611:-1
so has part: feature:5078-5611:-1:exon

WP_215217043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5078-5611:-1:exon

RHABOEDO_RS10415
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10415
old locus tag: RHABOEDO_001869
so part of: sequence
location: complement(5639..5824)
location: region:5639-5824:-1
so has part: feature:5639-5824:-1:exon
subclass of: SO_0000010

position:5639:-1
position: 5639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5824:-1
position: 5824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5639-5824:-1:exon

RHABOEDO_RS10415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10415
old locus tag: RHABOEDO_001869
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSISPATPSTSFSFYPEIDFEEGQVVPPNGGNEEDQVESSSQPVPLKERMCAIADRMGYRF
SIO_010081: RHABOEDO_RS10415
subclass of: SO_0000673
so part of: RHABOEDO_RS10415
location: complement(5639..5824)
location: region:5639-5824:-1
so has part: feature:5639-5824:-1:exon

WP_215217042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5639-5824:-1:exon

RHABOEDO_RS10420
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10420
so part of: sequence
location: 6391..6645
location: region:6391-6645:1
so has part: feature:6391-6645:1:exon
subclass of: SO_0000010

position:6391:1
position: 6391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6645:1
position: 6645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6391-6645:1:exon

RHABOEDO_RS10420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10420
inference: COORDINATES: protein motif:HMM:NF025304.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIFNNQTQGETLPKGYHHLTYDQRCQIYILKARGDTSSSIANILKVHHSTISRELKRNKGQRGYRHQQAQEKAFLRACLKSFQK
SIO_010081: RHABOEDO_RS10420
subclass of: SO_0000673
so part of: RHABOEDO_RS10420
location: 6391..6645
location: region:6391-6645:1
so has part: feature:6391-6645:1:exon

WP_220017916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6391-6645:1:exon

RHABOEDO_RS10425
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10425
pseudo: true
so part of: sequence
location: complement(6625..>6759)
location: region:6625-6759:-1
so has part: feature:6625-6759:-1:exon
subclass of: SO_0000010

position:6625:-1
position: 6625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6759:-1
position: 6759
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6625-6759:-1:exon

RHABOEDO_RS10425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: RHABOEDO_RS10425
subclass of: SO_0000673
so part of: RHABOEDO_RS10425
location: complement(6625..>6759)
location: region:6625-6759:-1
so has part: feature:6625-6759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6625-6759:-1:exon

RHABOEDO_RS10430
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10430
pseudo: true
so part of: sequence
location: <6864..>7082
location: region:6864-7082:1
so has part: feature:6864-7082:1:exon
subclass of: SO_0000010

position:6864:1
position: 6864
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:7082:1
position: 7082
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6864-7082:1:exon

RHABOEDO_RS10430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612040.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: RHABOEDO_RS10430
subclass of: SO_0000673
so part of: RHABOEDO_RS10430
location: <6864..>7082
location: region:6864-7082:1
so has part: feature:6864-7082:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6864-7082:1:exon

RHABOEDO_RS10435
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10435
old locus tag: RHABOEDO_001871
so part of: sequence
location: 7168..8202
location: region:7168-8202:1
so has part: feature:7168-8202:1:exon
subclass of: SO_0000010

position:7168:1
position: 7168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8202:1
position: 8202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7168-8202:1:exon

RHABOEDO_RS10435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10435
old locus tag: RHABOEDO_001871
inference: COORDINATES: protein motif:HMM:NF033545.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MKKLIPSQRADLEHKLKHPKDYSERNRLCVILGYDEGISTKNLAKTLRISPITVQKYLREYDSENKTGSSPRGGSKSKLSQDQKESLLKHLQEKTYLKVKGIIAYVHEQYGIKYSRSGMTDWLIQHGFVYKRPKKIPGKLDPEKQRIFIEQYRALKETLNPDEEIYFIDAVHPEHQSQAVCGWIKKGVQKTLQTSGKQLRLHFAGALCLTGMKIFTEEYKTVDADAMLDFFKKLEKQTEARIIHVILDNARSNKNKKLEEFLMSSRIKVHYLPPYSPNLNPIERLWKILKEKKVYNRYYETSVTFFQAIRGFFLEEIPKITDILKCRINDKFQVVDLNPIKLAV
SIO_010081: RHABOEDO_RS10435
subclass of: SO_0000673
so part of: RHABOEDO_RS10435
location: 7168..8202
location: region:7168-8202:1
so has part: feature:7168-8202:1:exon

WP_215216421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7168-8202:1:exon

RHABOEDO_RS10440
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10440
so part of: sequence
location: 8221..8736
location: region:8221-8736:1
so has part: feature:8221-8736:1:exon
subclass of: SO_0000010

position:8221:1
position: 8221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8736:1
position: 8736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8221-8736:1:exon

RHABOEDO_RS10440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10440
inference: COORDINATES: protein motif:HMM:NF033563.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MKQRPCIVEKKTRLGDWELDTVIGAGHKGVIVSMVERTSKLTKLAKVSHKTAEEVSQALIEQLKPIKDFVHTLTADNGKEFAYHQMVSFELETDFYFATPYHSWERGLNEHTNGLVRQYFPKTQSFLDTTSKDIERVETLLNNRPRKALNFETPLEVFTRLSTNMLCSGAQ
SIO_010081: RHABOEDO_RS10440
subclass of: SO_0000673
so part of: RHABOEDO_RS10440
location: 8221..8736
location: region:8221-8736:1
so has part: feature:8221-8736:1:exon

WP_281069559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8221-8736:1:exon

RHABOEDO_RS10445
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10445
old locus tag: RHABOEDO_001872
so part of: sequence
location: complement(9354..9869)
location: region:9354-9869:-1
so has part: feature:9354-9869:-1:exon
subclass of: SO_0000010

position:9354:-1
position: 9354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9869:-1
position: 9869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9354-9869:-1:exon

RHABOEDO_RS10445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10445
old locus tag: RHABOEDO_001872
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MVFFSSGRGGGEQVDYGYKGKGVTSHLLVEKSGKPLAITFTSASGDEKKQVIPLLRKVIPFIKKAWNQGKVPILEADKGYDSEQTRIDVLSHEVFPLIARKRNTKGYKIKGICYLEKQRWVVERTISWLKTCFRRLTVRWERKAIYWNGLLMFGLLGYWMNFLSRQVSLKQ
SIO_010081: RHABOEDO_RS10445
subclass of: SO_0000673
so part of: RHABOEDO_RS10445
location: complement(9354..9869)
location: region:9354-9869:-1
so has part: feature:9354-9869:-1:exon

WP_215216393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9354-9869:-1:exon

RHABOEDO_RS10450
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10450
old locus tag: RHABOEDO_001873
so part of: sequence
location: 10031..10777
location: region:10031-10777:1
so has part: feature:10031-10777:1:exon
subclass of: SO_0000010

position:10031:1
position: 10031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10777:1
position: 10777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10031-10777:1:exon

RHABOEDO_RS10450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10450
old locus tag: RHABOEDO_001873
inference: COORDINATES: protein motif:HMM:NF013793.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MRKICIALSKGGVAKSSTAVSVSHGIALSGKKVLLIDTDDQGQDAFLLGVKPKYGLADVLNERVSVEQALFQAREGLWVLSGGRGLSGVKRAIGRKDFSSEQALSESLYSIEGRFDFVIVDTSPSWDTLTINALFYCLEVLTPVSLEVLTLNSLVEFAERLKSVQKFNKKLQHTYLLPTFWDRRVKKSSEVLEQLKKYYSEQICEPVKYSVRISEAAGFGKTIYEYAPSSSGAKDYQKTVERILNYGR
SIO_010081: RHABOEDO_RS10450
subclass of: SO_0000673
so part of: RHABOEDO_RS10450
location: 10031..10777
location: region:10031-10777:1
so has part: feature:10031-10777:1:exon

WP_215216392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10031-10777:1:exon

RHABOEDO_RS10455
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10455
old locus tag: RHABOEDO_001874
so part of: sequence
location: 10809..11174
location: region:10809-11174:1
so has part: feature:10809-11174:1:exon
subclass of: SO_0000010

position:10809:1
position: 10809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11174:1
position: 11174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10809-11174:1:exon

RHABOEDO_RS10455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10455
old locus tag: RHABOEDO_001874
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEPNKQESNKIIKQEKPSKNKAIKTSSNKAVLKQMLFAGIDKDTAILEEPKEKATFNLSVRTLRDLEDKWMEIRRLSGSKQISKTLIVEKAIEMALAEFDLKKQIGKFYCKLVGNKTNFS
SIO_010081: RHABOEDO_RS10455
subclass of: SO_0000673
so part of: RHABOEDO_RS10455
location: 10809..11174
location: region:10809-11174:1
so has part: feature:10809-11174:1:exon

WP_220017918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10809-11174:1:exon

RHABOEDO_RS10460
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10460
pseudo: true
so part of: sequence
location: <11326..>11452
location: region:11326-11452:1
so has part: feature:11326-11452:1:exon
subclass of: SO_0000010

position:11326:1
position: 11326
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:11452:1
position: 11452
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11326-11452:1:exon

RHABOEDO_RS10460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007916848.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4277 domain-containing protein
SIO_010081: RHABOEDO_RS10460
subclass of: SO_0000673
so part of: RHABOEDO_RS10460
location: <11326..>11452
location: region:11326-11452:1
so has part: feature:11326-11452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11326-11452:1:exon

RHABOEDO_RS10465
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10465
old locus tag: RHABOEDO_001875
so part of: sequence
location: 11669..11881
location: region:11669-11881:1
so has part: feature:11669-11881:1:exon
subclass of: SO_0000010

position:11669:1
position: 11669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11881:1
position: 11881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11669-11881:1:exon

RHABOEDO_RS10465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10465
old locus tag: RHABOEDO_001875
inference: COORDINATES: protein motif:HMM:NF024139.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MNSHHLDISRKVVTLPEAAIMLGMSPLTIRRAIKSGKIKAVQISPKGRYRILIEELNGFIQRNSQMTAVG
SIO_010081: RHABOEDO_RS10465
subclass of: SO_0000673
so part of: RHABOEDO_RS10465
location: 11669..11881
location: region:11669-11881:1
so has part: feature:11669-11881:1:exon

WP_256439885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11669-11881:1:exon

RHABOEDO_RS10470
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10470
old locus tag: RHABOEDO_001877
so part of: sequence
location: complement(12578..13519)
location: region:12578-13519:-1
so has part: feature:12578-13519:-1:exon
subclass of: SO_0000010

position:12578:-1
position: 12578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13519:-1
position: 13519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12578-13519:-1:exon

RHABOEDO_RS10470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10470
old locus tag: RHABOEDO_001877
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQARKIFKEPLASRGVFQEKFIISNINTQMGKIANALNLPASSNIQSLTLGNSNNFLGTNTLDCNGSAAFGIFAGIAAPTNGVTIGGFLGLGTANQTLSNSTAEFVMPTANTECNIYFTSYVGSVGSNGTSLILRSARGTASTPTANLTRSTLGFIGGNGYTGKGFTTTSKAAVLFVTTEDWSDTDNGASISFQATRSGTTKTSTIAQVINTAASTSGVAISNEGSGLLIKEGTNARMGRATLVSILLSPSVVTVFNNTVTANTEIFLCSNIPSGGPGILSVIARTAGVSFTISSSAIGDTSVVSWLLIEPSP
SIO_010081: RHABOEDO_RS10470
subclass of: SO_0000673
so part of: RHABOEDO_RS10470
location: complement(12578..13519)
location: region:12578-13519:-1
so has part: feature:12578-13519:-1:exon

WP_220017919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12578-13519:-1:exon

RHABOEDO_RS10475
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10475
old locus tag: RHABOEDO_001878
pseudo: true
so part of: sequence
location: complement(<13554..13964)
location: region:13554-13964:-1
so has part: feature:13554-13964:-1:exon
subclass of: SO_0000010

position:13554:-1
position: 13554
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:13964:-1
position: 13964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13554-13964:-1:exon

RHABOEDO_RS10475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10475
old locus tag: RHABOEDO_001878
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012222646.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: RHABOEDO_RS10475
subclass of: SO_0000673
so part of: RHABOEDO_RS10475
location: complement(<13554..13964)
location: region:13554-13964:-1
so has part: feature:13554-13964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13554-13964:-1:exon

RHABOEDO_RS10480
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10480
old locus tag: RHABOEDO_001879
so part of: sequence
location: complement(14052..14897)
location: region:14052-14897:-1
so has part: feature:14052-14897:-1:exon
subclass of: SO_0000010

position:14052:-1
position: 14052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14897:-1
position: 14897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14052-14897:-1:exon

RHABOEDO_RS10480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10480
old locus tag: RHABOEDO_001879
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTNNAINLSQLGIVAYNGTGTFFGRTLTSTGNTVTITNPNGVSAAPNFEVNTANININNLGGVPLAVENGGTGNTTLTENGLLLGNGTNPTTSVPAGTNGQLLIGATGEAPAFTTLTLLGGLTQTPGANSLTLTAPPITITGNGVTVTGSPVSLGGTVTLTVSAGAGLTWVNVSETKKTIAPNIGYIANNVAQVVFTLPDTANIGDMFYITGNGHAGTAGWQIKQNDSQQIYFGSKSTTAGLVGSLTATSQLDSICAVCVVAGTSTIWNIITSVGNIMVV
SIO_010081: RHABOEDO_RS10480
subclass of: SO_0000673
so part of: RHABOEDO_RS10480
location: complement(14052..14897)
location: region:14052-14897:-1
so has part: feature:14052-14897:-1:exon

WP_215216387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14052-14897:-1:exon

RHABOEDO_RS10485
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10485
old locus tag: RHABOEDO_001880
pseudo: true
so part of: sequence
location: complement(15515..>16300)
location: region:15515-16300:-1
so has part: feature:15515-16300:-1:exon
subclass of: SO_0000010

position:15515:-1
position: 15515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16300:-1
position: 16300
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15515-16300:-1:exon

RHABOEDO_RS10485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10485
old locus tag: RHABOEDO_001880
inference: COORDINATES: protein motif:HMM:NF033563.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: RHABOEDO_RS10485
subclass of: SO_0000673
so part of: RHABOEDO_RS10485
location: complement(15515..>16300)
location: region:15515-16300:-1
so has part: feature:15515-16300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15515-16300:-1:exon

RHABOEDO_RS10490
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10490
pseudo: true
so part of: sequence
location: <16384..16518
location: region:16384-16518:1
so has part: feature:16384-16518:1:exon
subclass of: SO_0000010

position:16384:1
position: 16384
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:16518:1
position: 16518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16384-16518:1:exon

RHABOEDO_RS10490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: RHABOEDO_RS10490
subclass of: SO_0000673
so part of: RHABOEDO_RS10490
location: <16384..16518
location: region:16384-16518:1
so has part: feature:16384-16518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16384-16518:1:exon

RHABOEDO_RS10495
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10495
so part of: sequence
location: complement(16498..16752)
location: region:16498-16752:-1
so has part: feature:16498-16752:-1:exon
subclass of: SO_0000010

position:16498:-1
position: 16498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16752:-1
position: 16752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16498-16752:-1:exon

RHABOEDO_RS10495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10495
inference: COORDINATES: protein motif:HMM:NF025304.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIFNNQTQGETLPKGYHHLTYDQRCQIYILKARGDTSSSIANILKVHHSTISRELKRNKGQRGYRHQQAQEKAFLRACLKSFQK
SIO_010081: RHABOEDO_RS10495
subclass of: SO_0000673
so part of: RHABOEDO_RS10495
location: complement(16498..16752)
location: region:16498-16752:-1
so has part: feature:16498-16752:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16498-16752:-1:exon

RHABOEDO_RS10500
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10500
old locus tag: RHABOEDO_001881
so part of: sequence
location: 16895..17443
location: region:16895-17443:1
so has part: feature:16895-17443:1:exon
subclass of: SO_0000010

position:16895:1
position: 16895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17443:1
position: 17443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16895-17443:1:exon

RHABOEDO_RS10500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10500
old locus tag: RHABOEDO_001881
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRTQNPRLVGCDRKGNFHGMHVFIPPHSRTYVTNQSYTTGAPKLQEDTRQLDPPKHEKDEFCEYTTSIKPAAILSIHPSIAKAWTTFSGVTGEVYEGFNVMSVHKKDTGSYLISFIIPMSSTNYVPVVIAEGFNVQAAPTLLKTHTLEVGTKFIEGNANLTSYDSHTIHVVIFGSLHSSCV
SIO_010081: RHABOEDO_RS10500
subclass of: SO_0000673
so part of: RHABOEDO_RS10500
location: 16895..17443
location: region:16895-17443:1
so has part: feature:16895-17443:1:exon

WP_220017920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16895-17443:1:exon

RHABOEDO_RS10505
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10505
old locus tag: RHABOEDO_001882
so part of: sequence
location: 17741..17908
location: region:17741-17908:1
so has part: feature:17741-17908:1:exon
subclass of: SO_0000010

position:17741:1
position: 17741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17908:1
position: 17908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17741-17908:1:exon

RHABOEDO_RS10505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10505
old locus tag: RHABOEDO_001882
inference: COORDINATES: protein motif:HMM:NF020943.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDKKTRMSIDVSEKEHKKIKMHVAKLGMSIRKFVTDCIQEKIFQKTDKQKSDDL
SIO_010081: RHABOEDO_RS10505
subclass of: SO_0000673
so part of: RHABOEDO_RS10505
location: 17741..17908
location: region:17741-17908:1
so has part: feature:17741-17908:1:exon

WP_215217748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17741-17908:1:exon

RHABOEDO_RS10510
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10510
so part of: sequence
location: 19002..19370
location: region:19002-19370:1
so has part: feature:19002-19370:1:exon
subclass of: SO_0000010

position:19002:1
position: 19002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19370:1
position: 19370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19002-19370:1:exon

RHABOEDO_RS10510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10510
inference: COORDINATES: protein motif:HMM:NF013842.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MPKPYSMDLRKRVLQYLEENNDKMKASQLFQVGIATVYRWVKRKKQRGNVEPLKKKSTYKKIDDQRLIAYVEKNPGHFLSEIAKHFGLTLQAIFYALKRLKITRKKRLRFIRKGMRKQERNI
SIO_010081: RHABOEDO_RS10510
subclass of: SO_0000673
so part of: RHABOEDO_RS10510
location: 19002..19370
location: region:19002-19370:1
so has part: feature:19002-19370:1:exon

WP_220017641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19002-19370:1:exon

RHABOEDO_RS10515
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10515
so part of: sequence
location: 19376..19861
location: region:19376-19861:1
so has part: feature:19376-19861:1:exon
subclass of: SO_0000010

position:19376:1
position: 19376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19861:1
position: 19861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19376-19861:1:exon

RHABOEDO_RS10515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10515
inference: COORDINATES: protein motif:HMM:NF033545.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MEAISPEKRVYLDQSGISQYVHRQYARSARGKQIFGGISGKRFGRQSVISALQGKKLLAPMCFEGTCHTDLFNVWLKQELIPNLTHGQVLILDNASFHKSKTTRTLIEESGYEMLFLPPYSPDLNPIEKYWANMKTKIRELLPTVANLSEALDQAVLSMSI
SIO_010081: RHABOEDO_RS10515
subclass of: SO_0000673
so part of: RHABOEDO_RS10515
location: 19376..19861
location: region:19376-19861:1
so has part: feature:19376-19861:1:exon

WP_245397625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19376-19861:1:exon

RHABOEDO_RS10520
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10520
old locus tag: RHABOEDO_001885
so part of: sequence
location: 20265..21338
location: region:20265-21338:1
so has part: feature:20265-21338:1:exon
subclass of: SO_0000010

position:20265:1
position: 20265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21338:1
position: 21338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20265-21338:1:exon

RHABOEDO_RS10520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10520
old locus tag: RHABOEDO_001885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944591.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MVILSGPRQAGKTTLAKAISKQFTSSMYLNYDSYEDRRIFLKEAWLPSVELLIFDEIHKMPKWKNYLKGVYDTKPEHQKILVTGSARLEVFKQVGDSLAGRYFLHRLMPLSPAECEKVHVNYTIDRFLERGGFPEPFLTQDLMDTDRWRLQYIDSLLREDVLDFENIQNLNAIRLVFELLRERVGSPVSYSSIAQDAAISPNTVKKYIQILEALYIVFRVTPFSRNIARSLLKEPKIYFFDIGLVKGGSGSRFENLVGFCLLKHALAKADYQAKIVSLHYLLTKEKKEVDFVLAQDNQMEKLIEVKYSDHLINPSLRYFHEKYQTPSVQVVKELKREWVENQIEVVQGVNFLKSLYL
SIO_010081: RHABOEDO_RS10520
subclass of: SO_0000673
so part of: RHABOEDO_RS10520
location: 20265..21338
location: region:20265-21338:1
so has part: feature:20265-21338:1:exon

WP_245397626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20265-21338:1:exon

RHABOEDO_RS10525
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10525
old locus tag: RHABOEDO_001886
so part of: sequence
location: complement(21384..21596)
location: region:21384-21596:-1
so has part: feature:21384-21596:-1:exon
subclass of: SO_0000010

position:21384:-1
position: 21384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21596:-1
position: 21596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21384-21596:-1:exon

RHABOEDO_RS10525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10525
old locus tag: RHABOEDO_001886
inference: COORDINATES: protein motif:HMM:NF024139.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MNSHLLDTSRKVVTLPEAAVMLGMSSLTIRRAIKSGKIKAMQISPKGRYRILIEELNGFIQRNSQITDMG
SIO_010081: RHABOEDO_RS10525
subclass of: SO_0000673
so part of: RHABOEDO_RS10525
location: complement(21384..21596)
location: region:21384-21596:-1
so has part: feature:21384-21596:-1:exon

WP_215217581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21384-21596:-1:exon

RHABOEDO_RS10530
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10530
old locus tag: RHABOEDO_001887
so part of: sequence
location: complement(21888..22058)
location: region:21888-22058:-1
so has part: feature:21888-22058:-1:exon
subclass of: SO_0000010

position:21888:-1
position: 21888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22058:-1
position: 22058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21888-22058:-1:exon

RHABOEDO_RS10530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10530
old locus tag: RHABOEDO_001887
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKTKVLEVDEKMEKSLTNICDAALRYHGLQIMNTVVEVASAIRDREEEKYEERLP
SIO_010081: RHABOEDO_RS10530
subclass of: SO_0000673
so part of: RHABOEDO_RS10530
location: complement(21888..22058)
location: region:21888-22058:-1
so has part: feature:21888-22058:-1:exon

WP_215217582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21888-22058:-1:exon

RHABOEDO_RS10535
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10535
old locus tag: RHABOEDO_001888
so part of: sequence
location: 22473..23492
location: region:22473-23492:1
so has part: feature:22473-23492:1:exon
subclass of: SO_0000010

position:22473:1
position: 22473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23492:1
position: 23492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22473-23492:1:exon

RHABOEDO_RS10535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10535
old locus tag: RHABOEDO_001888
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MNAEIIELEEKHKLNYKQVIEIKNERLWQALSRVNLRTAIIEWIETITNPCTKSSYTTSMKELLERGFLNPNWSLQMFGVLSTNAIVDQIKTQTIYIKNKITEETKQEWSTRTKEARISCLLAFTRYLSRKTEGIIAKATPNRTGLEKTFSPPSKKVKTESLNRAQLYRFLEELEQINPRDALIAKLCLHGAKRINEVLSLEVYRIDFEKRQILFKQSKSKLTDDFTIINFEKEGAQVLLQKLKDYIQARKGLVFLTRNNKGVKKTQVDRNFSKAGKNAQIPFRVSAHNLRTTAITLWKEDGFSDSLIMKASGHSSSEMVHRYDRTDIADNVTSKSYLL
SIO_010081: RHABOEDO_RS10535
subclass of: SO_0000673
so part of: RHABOEDO_RS10535
location: 22473..23492
location: region:22473-23492:1
so has part: feature:22473-23492:1:exon

WP_215217583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22473-23492:1:exon

RHABOEDO_RS10540
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10540
pseudo: true
so part of: sequence
location: 23599..>23727
location: region:23599-23727:1
so has part: feature:23599-23727:1:exon
subclass of: SO_0000010

position:23599:1
position: 23599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23727:1
position: 23727
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23599-23727:1:exon

RHABOEDO_RS10540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_035718769.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: RHABOEDO_RS10540
subclass of: SO_0000673
so part of: RHABOEDO_RS10540
location: 23599..>23727
location: region:23599-23727:1
so has part: feature:23599-23727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23599-23727:1:exon

RHABOEDO_RS10545
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10545
old locus tag: RHABOEDO_001889
pseudo: true
so part of: sequence
location: complement(<23751..>23846)
location: region:23751-23846:-1
so has part: feature:23751-23846:-1:exon
subclass of: SO_0000010

position:23751:-1
position: 23751
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:23846:-1
position: 23846
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23751-23846:-1:exon

RHABOEDO_RS10545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10545
old locus tag: RHABOEDO_001889
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: RHABOEDO_RS10545
subclass of: SO_0000673
so part of: RHABOEDO_RS10545
location: complement(<23751..>23846)
location: region:23751-23846:-1
so has part: feature:23751-23846:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23751-23846:-1:exon

RHABOEDO_RS10550
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10550
old locus tag: RHABOEDO_001890
so part of: sequence
location: complement(23903..26512)
location: region:23903-26512:-1
so has part: feature:23903-26512:-1:exon
subclass of: SO_0000010

position:23903:-1
position: 23903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26512:-1
position: 26512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23903-26512:-1:exon

RHABOEDO_RS10550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10550
old locus tag: RHABOEDO_001890
inference: COORDINATES: protein motif:HMM:NF024794.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M60 family metallopeptidase
translation: MPSENKIYESTWIEEDRANSVNRDNFVIDDREFFKNYLNRQSEYEESEYEEFSTTTHVATSNESIQRYESQFIEEKQSSDKTINLRSQDLEAYWWASYKNRQGFKEALSQFNLTPELLDKDPTAAINRSNNPNDPLYWLKRNLETYFDRENNRYFIPVTEDGGTDKIDPDYNINPKIRMAFDLYNHRTNYFSTDIFMKSGDEIAITVDALDNSQTNCFAATGTSYSSGYRKSNPMALVEHQTVIYTATRAGPLMLACINKNRDMKSWGKRIKITAVPKNETKKVPIFVFGLNSQKEWRENISQPSNSLNQLMMMNGRHKIYISGDVAKKLPLNVGKLLSEYLLISTTYDKLNGFDSSKALHFPTQNLQVITFELCGFISNSLVALCNNPKTRNISRTEYVDWHELGHTHTMGWSWGTEVEVTVNIYEMVAEGLFKGKKDKFQGYDLSDRARFKLDDPKYGNNRLWDPKSVPNFINAKVDSSVLFGGFDAMSSKSLDYRDLKNRKPAHVDNESIRLLMFLQLLFSYGDDFYAKLGKAYREAWNYGDSGNLFDTNQKDKDWFVLNASRASGRDLREFFDLWGLGYSQNVRDAIGAMKLPSPLDDKVVIGGSGTDTGYGGSEGTIIVDKSYERTAIAYKRSGKTIKVYEYSDGDLIVYEEPEGIRSDYNPSQGTMPGSGGTITVDKRGGTTNIVYKRSGKTIKVYEDSETIKVYEEPEGITTVYKSDAGTTTDTGSGTGDHGGTTTGTDTGYGGSEGTIIVDKSYERTAIAYTRSGRTIKVYEYSDGDLIVYEEPEGIRSDYKRSQGTMPGSGVTLTVDKRGGTTNIVYKRSGKTFTFYQDSQGTIKVSEEPEGITTVYKSDAGTNTGSGVY
SIO_010081: RHABOEDO_RS10550
subclass of: SO_0000673
so part of: RHABOEDO_RS10550
location: complement(23903..26512)
location: region:23903-26512:-1
so has part: feature:23903-26512:-1:exon

WP_220017909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23903-26512:-1:exon

RHABOEDO_RS10555
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10555
old locus tag: RHABOEDO_001891
so part of: sequence
location: complement(27535..30201)
location: region:27535-30201:-1
so has part: feature:27535-30201:-1:exon
subclass of: SO_0000010

position:27535:-1
position: 27535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30201:-1
position: 30201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27535-30201:-1:exon

RHABOEDO_RS10555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10555
old locus tag: RHABOEDO_001891
inference: COORDINATES: protein motif:HMM:NF024794.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M60 family metallopeptidase
translation: MTPELLDKDPTAAINRSNNPNDPLYWLKRNLETYFDRENNRYFIPVTEYGGAGSDDRIVPTHDKTRMAFDLSTRRTSYFPTDIFMEPGDEIAITVDALDNPQTNCFTVTGTYYPYIELNSMALVEHQTVIYTATTSGPLMLACINNNRDMKSWGKRIKITAVPKNETKKVPIFVFGLNSQKEWRENISQNPNSLNQVMMMSGRDRIYILGDVAKKLPLNIGKLLSEYLLISTAYDKLNGFDSSKAFHFPTQNLQVVTFERGDYVTANVVAVCNDPNRRKSRTEFVDWHELGHAHTMGWSWGSESEVTANIYEMVAERLFKGKQDKFGSYEISRASIFRLDDPEYGNDRFWDPKSVPNFINAKVDPSVLQGGFDAMSSKTYDFRTSIEKPGHVNNEFIRLLMFLQLLFSYGDDFYAKLGKAYREAWNYGDSGNLFDTNQKDKDWFVLNASRASGRDLREFFDLWGLGYSQNVRDAIGAMKLPSPLDDKVIVGGSGTDTGYGGSEGTITVDKSYGVTSVAYTRSGRTIKVYEYSDGDIMVYEEPEGIKSYYKPSQGTIPGSGGTITVDKRGGTTNIVYKRSGKTFTFYQDSQGTIKVSEEPEGITTVYKSDGGTNTDTGSGTGGDVGTTTGTDTGYGGSEGTITVDKSYGVTSVAYTRSGRTIKVYEYSDGDLIVYEEPEGIRSDYNPSQGTMPGSGGTITVDKRGGTTNIVYKRSGKTIKVYEDSETIKVYEEPEGITTVYKSDAGTTTDTGSGTGDHGGTTTGTDTGYGGSEGTIIVDKSYERTAIAYTRSGRTIKVYEYSDGDLIVYEEPEGIRSDYKRSQGTMPGSGVTLTVDKRGGTTNIVYKRSGKTFTFYQDSQGTIKVSEEPEGITTVYKRDEITNTGFGGY
SIO_010081: RHABOEDO_RS10555
subclass of: SO_0000673
so part of: RHABOEDO_RS10555
location: complement(27535..30201)
location: region:27535-30201:-1
so has part: feature:27535-30201:-1:exon

WP_220017910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27535-30201:-1:exon

RHABOEDO_RS10560
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10560
old locus tag: RHABOEDO_001892
so part of: sequence
location: complement(30674..31027)
location: region:30674-31027:-1
so has part: feature:30674-31027:-1:exon
subclass of: SO_0000010

position:30674:-1
position: 30674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31027:-1
position: 31027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30674-31027:-1:exon

RHABOEDO_RS10560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10560
old locus tag: RHABOEDO_001892
inference: COORDINATES: protein motif:HMM:NF017474.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF807 family protein
translation: MLNVYFAFEGPTAKVLSYFGNTEKAIENLSVNRTAAGKYTCVFLTGRRVNQNQQPIVQGTSNGRTETVGICNIIRTNIVFFPNYGAYPYQITIDIESYGGAADPDIIMVAYSQSECI
SIO_010081: RHABOEDO_RS10560
subclass of: SO_0000673
so part of: RHABOEDO_RS10560
location: complement(30674..31027)
location: region:30674-31027:-1
so has part: feature:30674-31027:-1:exon

WP_215217614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30674-31027:-1:exon

RHABOEDO_RS10565
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10565
old locus tag: RHABOEDO_001893
so part of: sequence
location: complement(31147..31605)
location: region:31147-31605:-1
so has part: feature:31147-31605:-1:exon
subclass of: SO_0000010

position:31147:-1
position: 31147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31605:-1
position: 31605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31147-31605:-1:exon

RHABOEDO_RS10565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10565
old locus tag: RHABOEDO_001893
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEVIKIAFVPSTTGINVPCRLVNYNDKSRNTQITRNNTGRYTASFLTKADIDETEAAYPVINVTCQGPENSGTVVNVLNPTAKYQPKNKEGYNYLVRFQIETKNVVNSVTLPIALLTLLGFTFNVTQFVDRSVVMLSCELHCWNQKYACECG
SIO_010081: RHABOEDO_RS10565
subclass of: SO_0000673
so part of: RHABOEDO_RS10565
location: complement(31147..31605)
location: region:31147-31605:-1
so has part: feature:31147-31605:-1:exon

WP_215217615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31147-31605:-1:exon

RHABOEDO_RS10570
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10570
old locus tag: RHABOEDO_001895
so part of: sequence
location: complement(32034..32456)
location: region:32034-32456:-1
so has part: feature:32034-32456:-1:exon
subclass of: SO_0000010

position:32034:-1
position: 32034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32456:-1
position: 32456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32034-32456:-1:exon

RHABOEDO_RS10570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10570
old locus tag: RHABOEDO_001895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSMKRVVHFEFDIPTPIAGVPKNIFASEFSDQNMNRNHVLAASAIAGTFTLSFLTKGNADEVIEKACLKSQTVSAKAAAAGGWSIVLPYQTTYWSYQAQNSDGYSYLFTFPLVLFNAANVQADVPAGGIIINMDFEISLV
SIO_010081: RHABOEDO_RS10570
subclass of: SO_0000673
so part of: RHABOEDO_RS10570
location: complement(32034..32456)
location: region:32034-32456:-1
so has part: feature:32034-32456:-1:exon

WP_215217616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32034-32456:-1:exon

RHABOEDO_RS10575
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10575
so part of: sequence
location: complement(32776..33198)
location: region:32776-33198:-1
so has part: feature:32776-33198:-1:exon
subclass of: SO_0000010

position:32776:-1
position: 32776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33198:-1
position: 33198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32776-33198:-1:exon

RHABOEDO_RS10575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10575
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MVFFSSGCGGGEQVDYGYKGKGVTSHLLLEKSGKPLAITFTSASGDEKKQVIPLLRKVIPFIKKAWNQGKVPILEADKGYDSEQTRIDVLSHEVFPLIARKRNTKGYKIKGICYLEKQRWFVERTISWLKTCFRRLTVRW
SIO_010081: RHABOEDO_RS10575
subclass of: SO_0000673
so part of: RHABOEDO_RS10575
location: complement(32776..33198)
location: region:32776-33198:-1
so has part: feature:32776-33198:-1:exon

WP_220017911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32776-33198:-1:exon

RHABOEDO_RS10580
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10580
so part of: sequence
location: complement(33341..33508)
location: region:33341-33508:-1
so has part: feature:33341-33508:-1:exon
subclass of: SO_0000010

position:33341:-1
position: 33341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33508:-1
position: 33508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33341-33508:-1:exon

RHABOEDO_RS10580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MSKQGLNEEQFKILEPQMEKWVNRNHYGRKLAPWRPVVNTIFWVLRTRSSLERCT
SIO_010081: RHABOEDO_RS10580
subclass of: SO_0000673
so part of: RHABOEDO_RS10580
location: complement(33341..33508)
location: region:33341-33508:-1
so has part: feature:33341-33508:-1:exon

WP_215217055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33341-33508:-1:exon

RHABOEDO_RS10585
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10585
old locus tag: RHABOEDO_001898
so part of: sequence
location: complement(33759..34373)
location: region:33759-34373:-1
so has part: feature:33759-34373:-1:exon
subclass of: SO_0000010

position:33759:-1
position: 33759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34373:-1
position: 34373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33759-34373:-1:exon

RHABOEDO_RS10585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10585
old locus tag: RHABOEDO_001898
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTTSTECDLVQTSYVGSSATNASNLIHLTARGTVLAPTANQRGDILAEWGVRGYNGTGFAAASMGSLLMKANENWTTTSNGTNISFQVTSNITNTLRQVATILNSSASISGVAISELGAGFLIKEGSNARMGVVTLSAGTATVLNSTVTANTRIFLTVNRQSSLNLLGFLRVSGRTPGVSFSISTGIALDFGSVVSWLLIEPI
SIO_010081: RHABOEDO_RS10585
subclass of: SO_0000673
so part of: RHABOEDO_RS10585
location: complement(33759..34373)
location: region:33759-34373:-1
so has part: feature:33759-34373:-1:exon

WP_220017912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33759-34373:-1:exon

RHABOEDO_RS10590
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10590
so part of: sequence
location: 34363..34719
location: region:34363-34719:1
so has part: feature:34363-34719:1:exon
subclass of: SO_0000010

position:34363:1
position: 34363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34719:1
position: 34719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34363-34719:1:exon

RHABOEDO_RS10590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGITNSAVDPNRNCVAVPIPRKGEITKLFGGAVVPATVPKAADPLQSKVLIPRKLLEFPKVKEVKFEEAEIFIAFVIVTILHSLFTYYLRYLVPKCDGNFKTFWFFLPIFLAVRRWP
SIO_010081: RHABOEDO_RS10590
subclass of: SO_0000673
so part of: RHABOEDO_RS10590
location: 34363..34719
location: region:34363-34719:1
so has part: feature:34363-34719:1:exon

WP_220017913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34363-34719:1:exon

RHABOEDO_RS10595
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10595
old locus tag: RHABOEDO_001899
so part of: sequence
location: complement(34992..35849)
location: region:34992-35849:-1
so has part: feature:34992-35849:-1:exon
subclass of: SO_0000010

position:34992:-1
position: 34992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35849:-1
position: 35849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34992-35849:-1:exon

RHABOEDO_RS10595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10595
old locus tag: RHABOEDO_001899
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKIANVTNTPVSSSVPSLTLGNANNFLGANSLDCKGSGAFGTFAGMAAPINGLVGSGFLGVRTATQFLSGSTAEFFMPTTSSECNIVQTTYAGSGSANGSNLIHFTARGTALAPTANQMGDALGIWGIRGYNGTDFVTTSKASITMLANETWTTNANGTAISFQITPPNSTTPSEIVRALSTSASISGLAITRAGSGFMIKEGANARMGIARLVPLFLAPSSVTVANNTVTLNTRIFLTNNNPSGLALGEVFVALVIPGVSFTIASIAMGDTSSIAWLLVEPAP
SIO_010081: RHABOEDO_RS10595
subclass of: SO_0000673
so part of: RHABOEDO_RS10595
location: complement(34992..35849)
location: region:34992-35849:-1
so has part: feature:34992-35849:-1:exon

WP_215217053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34992-35849:-1:exon

RHABOEDO_RS10600
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10600
old locus tag: RHABOEDO_001900
so part of: sequence
location: complement(35883..36668)
location: region:35883-36668:-1
so has part: feature:35883-36668:-1:exon
subclass of: SO_0000010

position:35883:-1
position: 35883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36668:-1
position: 36668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35883-36668:-1:exon

RHABOEDO_RS10600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10600
old locus tag: RHABOEDO_001900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLGSGNNFFGTNTLDCEGSGAFGTFAGTAAPTNGIIVSGFLGVGTATQFLTGSTAEFVGTSPAVECDVTQTSYVGSNATNASSLLQYTARGTALTPTANQSGDLLGVWGARGYTGSAFTTTSKATISMITTQAWTATNNGTAITFSVTKNGTTTLGEIARIINTNTTNTGLAITDLGSGLLVKEGLNARMGIVMLVAGIAIVLNNTVTANTRIFLTNSGIGINVGQLTILARIPGVSFTISSNLLTAAVSVAWLMIEPAP
SIO_010081: RHABOEDO_RS10600
subclass of: SO_0000673
so part of: RHABOEDO_RS10600
location: complement(35883..36668)
location: region:35883-36668:-1
so has part: feature:35883-36668:-1:exon

WP_220017914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35883-36668:-1:exon

RHABOEDO_RS10605
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10605
old locus tag: RHABOEDO_001901
so part of: sequence
location: complement(36790..37626)
location: region:36790-37626:-1
so has part: feature:36790-37626:-1:exon
subclass of: SO_0000010

position:36790:-1
position: 36790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37626:-1
position: 37626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36790-37626:-1:exon

RHABOEDO_RS10605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10605
old locus tag: RHABOEDO_001901
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANAINLNQTGIVAYNNSTGVFFGRTLTSTGSTVTITNPNGVNGNPNFEVNFSGTNINSFTGVLSVTNGGTGNSTFPTNSILIGNGSGPIGSIPAGTNGQVLIGTTGSPAAFSTLTLSGGLTQTQGAGTLTLTAPPITITGSGVTVTGSPVSLGGTVSLTVTNSGITWVNVTGTTQTIATNTGYIANNAAQVVFNLPATAAIGDTFYITGNGNAGTAGWKINQNAGQEIFFGSSTTSVGTGGSLTSTNQLDSIRAVCIVPGFATIWNVINSIGNIIVV
SIO_010081: RHABOEDO_RS10605
subclass of: SO_0000673
so part of: RHABOEDO_RS10605
location: complement(36790..37626)
location: region:36790-37626:-1
so has part: feature:36790-37626:-1:exon

WP_215217051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36790-37626:-1:exon

RHABOEDO_RS10610
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10610
old locus tag: RHABOEDO_001902
so part of: sequence
location: complement(37711..38145)
location: region:37711-38145:-1
so has part: feature:37711-38145:-1:exon
subclass of: SO_0000010

position:37711:-1
position: 37711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38145:-1
position: 38145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37711-38145:-1:exon

RHABOEDO_RS10610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10610
old locus tag: RHABOEDO_001902
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSIANGNINLGGGNIAVIGNSVTNTLAFFTPDTKGITWVDVTSSPIQMSVNTGYMDNFSGSTLYKLPASSAFGDVLFIVTAETENNGWMLNMAPTQQVCLGAIQTTFGGTITSLNSGDTLYLVCSQANIKWVAISFTGNFGIT
SIO_010081: RHABOEDO_RS10610
subclass of: SO_0000673
so part of: RHABOEDO_RS10610
location: complement(37711..38145)
location: region:37711-38145:-1
so has part: feature:37711-38145:-1:exon

WP_215217050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37711-38145:-1:exon

RHABOEDO_RS10615
type: Gene
subclass of: SO_0000704
RO_0002162: 2720720
locus tag: RHABOEDO_RS10615
old locus tag: RHABOEDO_001903
so part of: sequence
location: complement(38237..38749)
location: region:38237-38749:-1
so has part: feature:38237-38749:-1:exon
subclass of: SO_0000010

position:38237:-1
position: 38237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38749:-1
position: 38749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38237-38749:-1:exon

RHABOEDO_RS10615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2720720
locus tag: RHABOEDO_RS10615
old locus tag: RHABOEDO_001903
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFSCDPFPPSQFGTITLTGLTSGGAISPDANGNINLGGGNIAVIGNSATNTLAFFTPDIKGITWVDVTSSPIQMSVNTGYMDNFSGSTLYKLPASSAFGDVLFIVTAGTENNGWVLNMAPTQQVYLGATQTTFGGAITSLNPGDTLYLVCSQANIRWVAISFTGNFGST
SIO_010081: RHABOEDO_RS10615
subclass of: SO_0000673
so part of: RHABOEDO_RS10615
location: complement(38237..38749)
location: region:38237-38749:-1
so has part: feature:38237-38749:-1:exon

WP_215217049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38237-38749:-1:exon