Entomospira culicis strain BR151 plasmid p28, complete sequence.
type: Entry
definition: Entomospira culicis strain BR151 plasmid p28, complete sequence.
sequence version: NZ_CP118183.1
sequence date: 2023-03-14
sequence: sequence
division: CON
label: NZ_CP118183.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN33275005
keyword: RefSeq
source: Entomospira culicis
organism: Entomospira culicis
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Spirochaetaceae; Entomospira.
reference: 1
references: 33051478
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP118183.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.9.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 88x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/13/2023 18:52:47\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,675\nCDSs (total) :: 1,625\nGenes (coding) :: 1,623\nCDSs (with protein) :: 1,623\nGenes (RNA) :: 50\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 41\nncRNAs :: 3\nPseudo Genes (total) :: 2\nCDSs (without protein) :: 2\nPseudo Genes (ambiguous residues) :: 0 of 2\nPseudo Genes (frameshifted) :: 1 of 2\nPseudo Genes (incomplete) :: 1 of 2\nPseudo Genes (internal stop) :: 0 of 2\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 28402
topology: circular
so has quality: SO_0000988
location: 1..28402
location: region:1-28402:1
RO_0002162: 2719989

NZ_CP118183
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN33275005
type: BioSample
SIO_000068: biosample

1
title: Spirochetes isolated from arthropods constitute a novel genus Entomospira genus novum within the order Spirochaetales
author: Grana-Miraglia, L.
author: Sikutova, S.
author: Vancova, M.
author: Bily, T.
author: Fingerle, V.
author: Sing, A.
author: Castillo-Ramirez, S.
author: Margos, G.
author: Rudolf, I.
journal: Sci Rep 10 (1), 17053 (2020)
pubmed: 33051478
comments: Publication Status: Online-Only

33051478
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Grana-Miraglia, L.
author: Sikutova, S.
author: Vancova, M.
author: Bily, T.
author: Fingerle, V.
author: Sing, A.
author: Castillo-Ramirez, S.
author: Margos, G.
author: Rudolf, I.
journal: Submitted (14-FEB-2023) German National Reference Centre for Borrelia, Bavarian Health and Food Safety Authority, Veterinarstrasse 2, Oberschleisheim 85764, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28402:1
position: 28402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28402:1:source
so part of: sequence
organism: Entomospira culicis
mol type: genomic DNA
strain: BR151
isolation source: mosquito midgut
host: Culex pipiens
type material: type strain of Entomospira culicis
plasmid: p28
country: Czech Republic: South Moravia
lat lon: 48.728577 N 16.764234 E
collection date: 1999

2719989
type: Taxonomy
SIO_000068: taxonomy

PVA46_RS08230
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08230
old locus tag: PVA46_08230
so part of: sequence
location: complement(join(28397..28402,1..312))
location: region:1-28402:-1
so has part: feature:1-312:-1:exon
so has part: feature:28397-28402:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28402:-1
position: 28402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-312:-1:exon

position:312:-1
position: 312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28397-28402:-1:exon

position:28397:-1
position: 28397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PVA46_RS08230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08230
old locus tag: PVA46_08230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITKQDIYTILQEISLKESTHHPFPQANKIWRIIDLLSWMGDRAVTYEAIEAHNQFIDRHNNDRQGKYYGDASNYLQLTKEVATNTIALTSRGKDFLQQTPKNQR
SIO_010081: PVA46_RS08230
subclass of: SO_0000673
so part of: PVA46_RS08230
location: complement(join(28397..28402,1..312))
location: region:1-28402:-1
so has part: feature:1-312:-1:exon
so has part: feature:28397-28402:-1:exon

WP_274360346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28397-28402:-1:exon

PVA46_RS08235
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08235
old locus tag: PVA46_08235
so part of: sequence
location: complement(835..3705)
location: region:835-3705:-1
so has part: feature:835-3705:-1:exon
subclass of: SO_0000010

position:835:-1
position: 835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3705:-1
position: 3705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835-3705:-1:exon

PVA46_RS08235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08235
old locus tag: PVA46_08235
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MNLSTEEIEQRVQAFIYEWKDYDGKEIAESQTFWNELFNVFGKQRKTLVSYEESIKKMTGNKGRIDVFWPGELLAEQKGPGVKLDETVMQQALGYVEMLPDSEKPKKIVLCNFQEFKIIALASGEVKEFRLEEFGKYYREFLFIAGYSDYITYQEEEISLQAAELLAKLYTSIEKGDNKPSLELNYFMVRLLYCFFADHTELFSQSTIVHPFHNYLEKYSNSDGRDLHSHIRDIFEVLNTPKEQRDARLNDDLKSFPYVNGELFSDTSYRLYGNKEIRDTLLEVAKFNWSEISPAIFGTLFQSITNPRTREIRGEHYTSETNILKALKPLFLHRLEAEYETIKDNRRELEHFIEKLSSITVLDPACGSGNFLVVAYRELRQLELNALQYLHKDKKERHLLRESIHAEIKVNVNQFYGIEIEQLPSKIAQLALWLTDHQMNMQASSTFGFNYTRLPLTASATIYNDNALTLDWNAVIPASELNYIVGNPPFLGYANKDSSLEGKELLALQKKDKALVFANWKNVGTLDYVACWYKKSVDMMKLNPKITCALVSTNSITQGVQVFPLWYPLITEYGLHIHFAHRTFKWFNEAKGKAQVHCVVIGFGLFEVETKHLWDYELGKDEKDQPTEIVTERRSSLKINPYLVFDNEMIMVKQRSSPLDPSMPNMFLGSIARDGTSEKDATGKKKVDQGFFFTAEEKEAFLAKEPEAKKYFRQVLGADEFLNAKERYCLWLADANPVELAKLPEVVKRVNRVEQFRLASKRASTRKLADRSRYFGEIRQPTTDYLLIPRVSSEHRVYSPIGYVNKDVIITDSAISLEHATPYIFGVLSSRMHQVWLANVAGRMKSDFRYSNTLVYNTFPFPHEPTAKAQEKVEKLALQMLAIRQSYLEQGVTLAQLYNKESFRLYSDLVKVHRELDKAVEACYRKESFDEETNMERISFLFSQYQHYTDTLFAGN
SIO_010081: PVA46_RS08235
subclass of: SO_0000673
so part of: PVA46_RS08235
location: complement(835..3705)
location: region:835-3705:-1
so has part: feature:835-3705:-1:exon

WP_167696505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:835-3705:-1:exon

PVA46_RS08240
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08240
old locus tag: PVA46_08240
so part of: sequence
location: 3996..4688
location: region:3996-4688:1
so has part: feature:3996-4688:1:exon
subclass of: SO_0000010

position:3996:1
position: 3996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4688:1
position: 4688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3996-4688:1:exon

PVA46_RS08240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08240
old locus tag: PVA46_08240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKTNLFFRSITDVVGLTDERKTKRLEREDRLKDMGIYPSSSHSSNSKPMSAKQQAKEQAKYEQSLEKERAKYAKKAENKAKMGAMLKSSMGMPSATDQASLSGAKLSVGAVSFEQASAEKIYEGIAQLVNEAKSNLLPKGLMDRQAMFLKGNRLALYESIRDKVEIGLLKLNGMGGSDTSFLVLAQKKQAELADITSAITKHRKRLLMIFGGIVAGWVVLTVIMLAMIK
SIO_010081: PVA46_RS08240
subclass of: SO_0000673
so part of: PVA46_RS08240
location: 3996..4688
location: region:3996-4688:1
so has part: feature:3996-4688:1:exon

WP_167696507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3996-4688:1:exon

PVA46_RS08245
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08245
old locus tag: PVA46_08245
so part of: sequence
location: 4707..5567
location: region:4707-5567:1
so has part: feature:4707-5567:1:exon
subclass of: SO_0000010

position:4707:1
position: 4707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5567:1
position: 5567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4707-5567:1:exon

PVA46_RS08245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08245
old locus tag: PVA46_08245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLMGLFMAVLVGVSFNTFAITPYEEALLNNDITKFEQQVNFLEVQVKYQDLLKLYLFETKELRKETLEYLIQKGADLRKIIMNYSPDGKTQYGENDYGIESLSNLALTKIKDEEIFNFLLLKSNSYQTTAMMWQIFSSLILDSLGENRIFDDATKKYVKTSYNMPIKEIRDLWLTSLKNGMKGDDLVERLHPGRSFNLTEKSVYIRHILAVSDDVKHTKEYIKAYGTKTEELVALLTLAIQSEAEQVVATLLAYDKSLATEELLKKAKTTNNLKIVNSLEKALS
SIO_010081: PVA46_RS08245
subclass of: SO_0000673
so part of: PVA46_RS08245
location: 4707..5567
location: region:4707-5567:1
so has part: feature:4707-5567:1:exon

WP_167696509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4707-5567:1:exon

PVA46_RS08250
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08250
old locus tag: PVA46_08250
so part of: sequence
location: 5726..6550
location: region:5726-6550:1
so has part: feature:5726-6550:1:exon
subclass of: SO_0000010

position:5726:1
position: 5726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6550:1
position: 6550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5726-6550:1:exon

PVA46_RS08250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08250
old locus tag: PVA46_08250
inference: COORDINATES: protein motif:HMM:NF014548.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bro-N domain-containing protein
translation: MSNNYELALVFEYKKEDHTMDNVRTIEIDGETWFVIADICKILDLQAPHIVTKTLDEDDRSSTSVIDKLGREQTTNICNESGLYQIIFQSRKPEAKKFKKWVTQEVLPTIRKKGYYGTPKVVQHDYVRRYNENYLKVDKGYFSVISELYVILFGFLEHQGFTIPEKDTKTDKFIQPDNSVGMGFSKWLQEQYPKVFQSYPRKDYKHKTRSGAYVNCFQYPREVAGLFSEYVHDFWLVNNAPKYLGDRVGQDLKAPLLLILEEHKKRIEANNMPS
SIO_010081: PVA46_RS08250
subclass of: SO_0000673
so part of: PVA46_RS08250
location: 5726..6550
location: region:5726-6550:1
so has part: feature:5726-6550:1:exon

WP_167696511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5726-6550:1:exon

PVA46_RS08255
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08255
old locus tag: PVA46_08255
so part of: sequence
location: 6669..7325
location: region:6669-7325:1
so has part: feature:6669-7325:1:exon
subclass of: SO_0000010

position:6669:1
position: 6669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7325:1
position: 7325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6669-7325:1:exon

PVA46_RS08255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08255
old locus tag: PVA46_08255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGKELAEGLGIGLAPLIFMFSIGYVGFWLSYAGLKTKDKLAKIALFGMPFYLLVLVFGWTNSTLVMKITILLLGLILSLFLSLLWKNWLRHFLAKTFYNNNILNDDGYDTVIDELVSRTDIEIKMILVELLDGRILIGNLKPEYQQRNIKSGTIDNDGNIRLVVDCIIPQSDPDIEPIDQETIASYFDEQCNEEITTYIVSIIPQKEIKLMKFYIKY
SIO_010081: PVA46_RS08255
subclass of: SO_0000673
so part of: PVA46_RS08255
location: 6669..7325
location: region:6669-7325:1
so has part: feature:6669-7325:1:exon

WP_167696513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6669-7325:1:exon

PVA46_RS08260
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08260
old locus tag: PVA46_08260
so part of: sequence
location: complement(7322..7528)
location: region:7322-7528:-1
so has part: feature:7322-7528:-1:exon
subclass of: SO_0000010

position:7322:-1
position: 7322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7528:-1
position: 7528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7322-7528:-1:exon

PVA46_RS08260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08260
old locus tag: PVA46_08260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDKSKLKQKQNINEANTSSTSKMTCHSNTATATKKDGSQERRDNPISDKRSNGVQAIINTIKKSNHS
SIO_010081: PVA46_RS08260
subclass of: SO_0000673
so part of: PVA46_RS08260
location: complement(7322..7528)
location: region:7322-7528:-1
so has part: feature:7322-7528:-1:exon

WP_167696514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7322-7528:-1:exon

PVA46_RS08265
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08265
old locus tag: PVA46_08265
so part of: sequence
location: 7651..8562
location: region:7651-8562:1
so has part: feature:7651-8562:1:exon
subclass of: SO_0000010

position:7651:1
position: 7651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8562:1
position: 8562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7651-8562:1:exon

PVA46_RS08265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08265
old locus tag: PVA46_08265
inference: COORDINATES: protein motif:HMM:NF033547.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1595 family transposase
translation: MTEFKSVLDLITKLPTEKHCRDYLANIRWGDTPICPYCNHNHCYTLKDSRYKCAKCRTPFTVKVGTIFENSKLPLQKWLIAYYLLSCSSKGISSVSLAKQIGVRQPTAWFMLHRIREAMTAQPETLDGIVEIDETYVGGKEANKHESKKLKQGRGSVGKSAVVGMIQRGYAVQTFVVPNTQKRTLEPLIRRYVKETSLIMTDEYGAYNNLKEYYEGHYVVSHSKREFKRGIAYTNTIEGFWGLCKRAIIGVYHYISKKHLSRYMQDFSFRYNERECDATMMLNKILYYGIGKRLTYKQLVRGY
SIO_010081: PVA46_RS08265
subclass of: SO_0000673
so part of: PVA46_RS08265
location: 7651..8562
location: region:7651-8562:1
so has part: feature:7651-8562:1:exon

WP_167696516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7651-8562:1:exon

PVA46_RS08270
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08270
old locus tag: PVA46_08270
so part of: sequence
location: 8848..10653
location: region:8848-10653:1
so has part: feature:8848-10653:1:exon
subclass of: SO_0000010

position:8848:1
position: 8848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10653:1
position: 10653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8848-10653:1:exon

PVA46_RS08270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08270
old locus tag: PVA46_08270
inference: COORDINATES: protein motif:HMM:NF024573.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MFSYKKFVIHNYKAISTPVTINIHRGIYPILGVNESGKTTLLHAMMAFTDYNDLWNGDSSTGKQGYRHIDKVANIYTDTSKAKIEAEITCSVEEFQTIIESSEIEKEAVLISKLMDLSKDATPLTINITREINGEKRYLLNILVMNEVASNYISEEEQHRIASLMVNQKLPLIVYFDDFKDRFTGIIDILIDEKGAIKSPGDTNVKTLEQFFEVSFKNKEGEAKKKLSNLATDTNNKVKEIESKLQQTINTLINDQWELMAKIEERDPPKIVLRIERTEKTAVNKKEFNCRFSFTVEDSLIIGEEKEIRVFDLEERSKGFLWFFTFVWKTSFHPNKNSEKSVIYLLDEPGSYLHSSAQQGLCNVLEELAKDATVIYTTHSHYMLDEDFLNNTYIAHKDEKENKTINLCHYTQYTKIDKTPQPNALDPIILALKVEPSLIEKMLRKKALIIVEGMGDFYAWQSFLETEHKSNLGIIPSTGASQVLTLLSLALIHCHNVLCLLDDDDEVTQLKTKHPDFSDYIRVITGNKDITFLLDENELKTFAKTQNSKFNKDNLCLNDKKQLLKLIYAHSRKHKIEFPETKKTFEKFFNSEIKPLLDNNT
SIO_010081: PVA46_RS08270
subclass of: SO_0000673
so part of: PVA46_RS08270
location: 8848..10653
location: region:8848-10653:1
so has part: feature:8848-10653:1:exon

WP_167696518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8848-10653:1:exon

PVA46_RS08275
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08275
old locus tag: PVA46_08275
so part of: sequence
location: complement(10793..11086)
location: region:10793-11086:-1
so has part: feature:10793-11086:-1:exon
subclass of: SO_0000010

position:10793:-1
position: 10793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11086:-1
position: 11086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10793-11086:-1:exon

PVA46_RS08275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08275
old locus tag: PVA46_08275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDKSFYPNRRVKDEQKLEKWVNTPIKSYEEKAIKEPSVRITSYLPQSMHEHILTEVLPSLQGQKLNKDGRMKAYTITDYIRDLVVQDLAKRAKETE
SIO_010081: PVA46_RS08275
subclass of: SO_0000673
so part of: PVA46_RS08275
location: complement(10793..11086)
location: region:10793-11086:-1
so has part: feature:10793-11086:-1:exon

WP_167696520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10793-11086:-1:exon

PVA46_RS08280
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08280
old locus tag: PVA46_08280
so part of: sequence
location: complement(11076..11750)
location: region:11076-11750:-1
so has part: feature:11076-11750:-1:exon
subclass of: SO_0000010

position:11076:-1
position: 11076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11750:-1
position: 11750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11076-11750:-1:exon

PVA46_RS08280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08280
old locus tag: PVA46_08280
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MRVAIASTKGGVGKSTVSMHFAHALKLLYPDKRTLLMDADPQASCLNWSKWRAEAELKPFIEVQPLFEKGLKTILGEKEKAFDFILIDVGGSDNPSLRRTLAYVDAVVIPTSLDQAERIHTFDMMDIIDEALAEFNENLQVFMLFNRIKITKERGHIEEFKQGFPTYVHWLGGFIMQRVKFSRVYGQGQTVFDLEEKEADKKAEEEVLTVLKQLIPLIEATHER
SIO_010081: PVA46_RS08280
subclass of: SO_0000673
so part of: PVA46_RS08280
location: complement(11076..11750)
location: region:11076-11750:-1
so has part: feature:11076-11750:-1:exon

WP_167696522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11076-11750:-1:exon

PVA46_RS08285
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08285
old locus tag: PVA46_08285
so part of: sequence
location: 11963..12889
location: region:11963-12889:1
so has part: feature:11963-12889:1:exon
subclass of: SO_0000010

position:11963:1
position: 11963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12889:1
position: 12889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11963-12889:1:exon

PVA46_RS08285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08285
old locus tag: PVA46_08285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEKKELTIAITGKKTAKDIALQRGEFSLEKWRLNNEIHVMILASLNNIFTRHRQQRFWSAEDLEDVAKHLGVSYAGTEIYAWNIKLNTKQLKRLLMPAITTMQGNGIDGSNTTIDRIMRLVELACITNEQKVIDTNGRTFYPVIITKEGVDEYLITIRREVALWHANQKKEIVLDTFRLKQEGGFYQHLATPLEALLLGQDEKVNTTVAMRLYALILAHKEQLISQSPHEYLAIPKEELIVCLDNTRAIKKDGSKIKVSWKEIYHACETLIKVINQEYANLHQLKLEMHQKSEKGKKGLFFTSQKIE
SIO_010081: PVA46_RS08285
subclass of: SO_0000673
so part of: PVA46_RS08285
location: 11963..12889
location: region:11963-12889:1
so has part: feature:11963-12889:1:exon

WP_167696524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11963-12889:1:exon

PVA46_RS08290
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08290
old locus tag: PVA46_08290
so part of: sequence
location: complement(13254..13523)
location: region:13254-13523:-1
so has part: feature:13254-13523:-1:exon
subclass of: SO_0000010

position:13254:-1
position: 13254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13523:-1
position: 13523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13254-13523:-1:exon

PVA46_RS08290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08290
old locus tag: PVA46_08290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004602118.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MTYTLHYTTVAIKALKKLDRPSQILIMNWIEKHLIDCEDPRSKGKALKANLSGAWRYRIGDYRIIAEIDDSTVTILLLAIGHRKAIYNK
SIO_010081: PVA46_RS08290
subclass of: SO_0000673
so part of: PVA46_RS08290
location: complement(13254..13523)
location: region:13254-13523:-1
so has part: feature:13254-13523:-1:exon

WP_167696526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13254-13523:-1:exon

PVA46_RS08295
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08295
old locus tag: PVA46_08295
so part of: sequence
location: complement(13523..13744)
location: region:13523-13744:-1
so has part: feature:13523-13744:-1:exon
subclass of: SO_0000010

position:13744:-1
position: 13744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13523-13744:-1:exon

PVA46_RS08295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08295
old locus tag: PVA46_08295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005364804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6290 family protein
translation: MTISIRFNDEEAELIKQYAKHKKTTVSQVMRESILAELEDEYDIDAYQQAMQAYKEHPITHNHDEVKKLLDLE
SIO_010081: PVA46_RS08295
subclass of: SO_0000673
so part of: PVA46_RS08295
location: complement(13523..13744)
location: region:13523-13744:-1
so has part: feature:13523-13744:-1:exon

WP_167696527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13523-13744:-1:exon

PVA46_RS08300
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08300
old locus tag: PVA46_08300
so part of: sequence
location: 14276..15229
location: region:14276-15229:1
so has part: feature:14276-15229:1:exon
subclass of: SO_0000010

position:14276:1
position: 14276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15229:1
position: 15229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14276-15229:1:exon

PVA46_RS08300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08300
old locus tag: PVA46_08300
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MCQVITLNQLENFKVIYQIQDLTIFERISNLSPQTIKNYRQSVKLFFDQYGADVFENLRDYIKEYIIDGYTVEHSVGRPKGSSMSLGSQRVRKFALKAYFTKILATLPDAQRSMLEYIDSVKLASEVTKAVTQEKLLTRSEIELLLGKIKLTPKQEAILTLLYQTGLRASEAVGIKLSDIQSDTNIDYYRIKIIGKGNKLRYPLVQRSLINQINQLYNGSVYLFETASNPPQAMSYHALYRSIKAIEKKVVKAGITLHPHKLRHSFASHSLEALKEDASAVSKISKYLGHSSTSITMDYYLHGSLSSDDLIKIHQAR
SIO_010081: PVA46_RS08300
subclass of: SO_0000673
so part of: PVA46_RS08300
location: 14276..15229
location: region:14276-15229:1
so has part: feature:14276-15229:1:exon

WP_167696529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14276-15229:1:exon

PVA46_RS08305
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08305
old locus tag: PVA46_08305
so part of: sequence
location: 15349..16263
location: region:15349-16263:1
so has part: feature:15349-16263:1:exon
subclass of: SO_0000010

position:15349:1
position: 15349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16263:1
position: 16263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15349-16263:1:exon

PVA46_RS08305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08305
old locus tag: PVA46_08305
inference: COORDINATES: protein motif:HMM:NF019371.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Abi family protein
translation: MDKPKLMLKEQVDLLKHRGLTIETADEILLQEINYYLLINGYKDPFVEEQSEQYHQPTALKELYALYQFDSYLRSSTLHLLLSLEIYFKTMISDELAIYLLKKYPKEKSFEHNFYLDSALYQPIKNSSLTTESILNQLNKIIDHNEFQTPQIDHYVKKHGYVPLWVLMGEMSLGLVSKFYLILPLAVQQAIYKRCYPNIGLHPQKIKKLADSMHQFSLLRNHCAHGRRIYAEQFRRSNLIDILNKIFNLIENSITLKQEIAVYKKICTLGIEQLHENVSIMSWQRINNHANQLLVQLEHLVKTN
SIO_010081: PVA46_RS08305
subclass of: SO_0000673
so part of: PVA46_RS08305
location: 15349..16263
location: region:15349-16263:1
so has part: feature:15349-16263:1:exon

WP_167696531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15349-16263:1:exon

PVA46_RS08310
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08310
old locus tag: PVA46_08310
so part of: sequence
location: 16480..17448
location: region:16480-17448:1
so has part: feature:16480-17448:1:exon
subclass of: SO_0000010

position:16480:1
position: 16480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17448:1
position: 17448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16480-17448:1:exon

PVA46_RS08310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08310
old locus tag: PVA46_08310
inference: COORDINATES: protein motif:HMM:NF012464.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MVKIKSYLYGRTSSDEETRHNQQHYQEQVAILATFEGKIYFDLGISGDVPLSHRQQLKNIVRSIQRSKYDLYVIRLTTISRFSRSLALLEQIIQLTKNKKIQLEILVGDTNLKKGNYDLTDPQVRQGVLKAQNFILGKREKKEAQRQLAQLCYSTGLVLRNIVFNYDSINYLGSFATRYNKSHYQKNKKVMSKINALRRAGKSATEIATKLNLSKRTVNRKLYQQNEALILLWKMKHQQVLTWVQRVQIDDFGTTALIQKASPKKESKTVYYALAYARLVKKLAKEDLVAVQVGINQLNLVDYEATFLSEIEEELTDHVANL
SIO_010081: PVA46_RS08310
subclass of: SO_0000673
so part of: PVA46_RS08310
location: 16480..17448
location: region:16480-17448:1
so has part: feature:16480-17448:1:exon

WP_167696533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16480-17448:1:exon

PVA46_RS08315
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08315
old locus tag: PVA46_08315
pseudo: true
so part of: sequence
location: complement(17469..18027)
location: region:17469-18027:-1
so has part: feature:17469-18027:-1:exon
subclass of: SO_0000010

position:17469:-1
position: 17469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18027:-1
position: 18027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17469-18027:-1:exon

PVA46_RS08315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08315
old locus tag: PVA46_08315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002273547.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PVA46_RS08315
subclass of: SO_0000673
so part of: PVA46_RS08315
location: complement(17469..18027)
location: region:17469-18027:-1
so has part: feature:17469-18027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17469-18027:-1:exon

PVA46_RS08320
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08320
old locus tag: PVA46_08320
so part of: sequence
location: complement(18589..19002)
location: region:18589-19002:-1
so has part: feature:18589-19002:-1:exon
subclass of: SO_0000010

position:18589:-1
position: 18589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19002:-1
position: 19002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18589-19002:-1:exon

PVA46_RS08320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08320
old locus tag: PVA46_08320
inference: COORDINATES: protein motif:HMM:NF013540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIYYAKIEQDEDGLWCAEFIDFAPDLIVAEGTTLEEALIQAHSILHEYLAYGLPQKPQQRQSEKGFYAIEVSPAMIASLNIRWQRHKLGLTQQEVATALGLQQPNYARLEKSGKMDLTMLDKIAKALKINKASLIEA
SIO_010081: PVA46_RS08320
subclass of: SO_0000673
so part of: PVA46_RS08320
location: complement(18589..19002)
location: region:18589-19002:-1
so has part: feature:18589-19002:-1:exon

WP_167696535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18589-19002:-1:exon

PVA46_RS08325
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08325
old locus tag: PVA46_08325
so part of: sequence
location: complement(19017..19211)
location: region:19017-19211:-1
so has part: feature:19017-19211:-1:exon
subclass of: SO_0000010

position:19017:-1
position: 19017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19211:-1
position: 19211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19017-19211:-1:exon

PVA46_RS08325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08325
old locus tag: PVA46_08325
inference: COORDINATES: protein motif:HMM:NF019540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MKYSELEKKLKALGYSLDTSRKGRGSHRYYIHNTTEQRLMIPWHRSKEVAKGTLASIKRATGLE
SIO_010081: PVA46_RS08325
subclass of: SO_0000673
so part of: PVA46_RS08325
location: complement(19017..19211)
location: region:19017-19211:-1
so has part: feature:19017-19211:-1:exon

WP_167696537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19017-19211:-1:exon

PVA46_RS08330
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08330
old locus tag: PVA46_08330
so part of: sequence
location: 19440..20258
location: region:19440-20258:1
so has part: feature:19440-20258:1:exon
subclass of: SO_0000010

position:19440:1
position: 19440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20258:1
position: 20258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19440-20258:1:exon

PVA46_RS08330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08330
old locus tag: PVA46_08330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQEMLFFSLRIITSNTSHAEYPFLRVYTKDRKYQAIFNHRIEYKNESNQILKERIATNTPYHYLLTHHAEYDWDFEACLWLKPFQDEAFGDKEFDKISPSLLALKHTEVAPNGSYQNVHHLLTIRKALQSCLSYNSDFPLVYAFFNFTIYPYKDHLAKQLAIKIVSKDQAYIGIFNQPYAPFSLPSEAIYQETYLENPYPYLLSQSAQYDWDVEACSWLQPFITNSYDKEALKSITQYWSIRTVGLMGSSHYRRVTNLLELLESGENSKSMP
SIO_010081: PVA46_RS08330
subclass of: SO_0000673
so part of: PVA46_RS08330
location: 19440..20258
location: region:19440-20258:1
so has part: feature:19440-20258:1:exon

WP_167696539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19440-20258:1:exon

PVA46_RS08335
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08335
old locus tag: PVA46_08335
so part of: sequence
location: complement(20307..21407)
location: region:20307-21407:-1
so has part: feature:20307-21407:-1:exon
subclass of: SO_0000010

position:20307:-1
position: 20307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21407:-1
position: 21407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20307-21407:-1:exon

PVA46_RS08335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08335
old locus tag: PVA46_08335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDLEKEVIQSITPLDFQAYLKERGWQLYGKLANKASLWQSNSKKILLPLQRDLVDYEHRVYDLLNDLQAFEKRSLQSILTDLTHAQADILRIYAFKDDVKNNLPLEAISTLINSSINLFSATARSITNPQPVYQGKAPKEINSFVEKLRMGHTEKGSFVLVLENPITPQLIESDDISNEPFDRQVSIKLCQNIASLLNNMANISIGSFDDNMMRGISSNFCDALAEITDVCGDKGAFIDLTWAPVRPIKKEWNISHKFSIVPAMSGTLREMSRILKEKTPETNVEIEGYVIKLIANTASSSQGGRIHIFDTNSHRLIAIDLDPKQYTQALDAHKNDNKLRFIGNLDKSTKPKSLINIVTMEQMNG
SIO_010081: PVA46_RS08335
subclass of: SO_0000673
so part of: PVA46_RS08335
location: complement(20307..21407)
location: region:20307-21407:-1
so has part: feature:20307-21407:-1:exon

WP_167696541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20307-21407:-1:exon

PVA46_RS08340
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08340
old locus tag: PVA46_08340
so part of: sequence
location: complement(21407..21913)
location: region:21407-21913:-1
so has part: feature:21407-21913:-1:exon
subclass of: SO_0000010

position:21913:-1
position: 21913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21407-21913:-1:exon

PVA46_RS08340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08340
old locus tag: PVA46_08340
inference: COORDINATES: protein motif:HMM:NF025638.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4365 domain-containing protein
translation: MELNDQKEAISRVYVKAIASVAGFDCQDNTLDRDSIDVIFSNKNDAPYCKIEAQLKATAKQNLIKDDDSIHYSLPIKNYDDLRGKSILPRILICLLLPAGKDPNDWLTQDIEQLTIKKCAYYVSLKGLPDSTNATEITVKIPLANIFSIEALTKLMQEAESEFETGGN
SIO_010081: PVA46_RS08340
subclass of: SO_0000673
so part of: PVA46_RS08340
location: complement(21407..21913)
location: region:21407-21913:-1
so has part: feature:21407-21913:-1:exon

WP_167696542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21407-21913:-1:exon

PVA46_RS08345
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08345
old locus tag: PVA46_08345
so part of: sequence
location: 22134..23777
location: region:22134-23777:1
so has part: feature:22134-23777:1:exon
subclass of: SO_0000010

position:22134:1
position: 22134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23777:1
position: 23777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22134-23777:1:exon

PVA46_RS08345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08345
old locus tag: PVA46_08345
inference: COORDINATES: protein motif:HMM:NF015210.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF262 domain-containing protein
translation: MDDMIKTIISLKDYHFHIPAYQRGYRWTAKEVEDLLNDIKEFKPDEEKGTKYCLQPLIVKKQTDGSYEVVDGQQRLTTIAIFMQIVKEVMPFVTPPFTLDYTTRERSKDFLENIKSSSGSTDAEDNIDFYHMTHAYQTMFEWLNQQPDLSDAVSTLYSKIINKVFFIWYEVPAETRVIDLFNRVNMGKIPLTNAELIKALLLNQQNFNQNTREHDQAEMSIAWERMEHGLGNDAFWYFFNEKVLSSSSRMDQLFRLVAKDFVNNPHKYSDLFQNQSQLQEIVDKVKKLENSSLFSFYLFYEIIQSTVNEKKYSVIKRLWQEIESLDALLHSWYDEPTYYHLVGLLITFGKPLYKLVEMGFGQRKREMLANLLAEIKKQPIVEKFLKDEEITNSNSHKKELRNLLLFFNIATLVTKSEKQARFPFDIYKKYDWDIEHIHATADDTATADDNLGNLTLLDKGTNRSYKNKPFKEKRAMILACDQSGLFIPVCTKNIFIKAYSANPKDLEDWYGDEVEEVNHDDKTNYLLAMKAIVGDFFDKPLGEKIDV
SIO_010081: PVA46_RS08345
subclass of: SO_0000673
so part of: PVA46_RS08345
location: 22134..23777
location: region:22134-23777:1
so has part: feature:22134-23777:1:exon

WP_167696544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22134-23777:1:exon

PVA46_RS08350
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08350
old locus tag: PVA46_08350
so part of: sequence
location: 23770..25950
location: region:23770-25950:1
so has part: feature:23770-25950:1:exon
subclass of: SO_0000010

position:23770:1
position: 23770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25950:1
position: 25950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23770-25950:1:exon

PVA46_RS08350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08350
old locus tag: PVA46_08350
inference: COORDINATES: protein motif:HMM:NF015210.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF262 domain-containing protein
translation: MSNASNYQTLLNLLDSYSIQIPLIQRDYVQGEKEKQATEIRKILLEDIYQALSQGNYLDLNFVYGKVLDNQGDQASIFIPIDGQQRLTTLWLLHLYAFHNDEAVLQKLSKFSYKTRKSSRQFLEHLITHCHEIFTSALMPSPSQEISDSAWFLPAWRYDPTVASMLTMLDDMTQKFNQSTQLDLATRLQEGYLHFQFLDTKVIGSEDDLYIKLNARGKALSPFDNLKSIIIEQIILHEEQLKQVYHIDRWEYEQLFDGDWTDYFWHRSKENFDTDFLLFLTFFFRNCRIIEDIKDGWWFGIDKHKLDTTVLMSLYHTLNFLISANAEKVDKFLFKIPEKTKKYEDVISSYGPEAYLLFHVVIQYCAMAKRASLDATFMADDSSKQWFRIFWNLIINSNNTIDRWERALEAITEINRLSDHWQELLRYCADKKKIGVFDSKQIAEEQFKAQILLDHPKKDTFTQAIYNAEKHHYFLGQIRSALYLSLKDDKKTIELSSLEKFEEYWQKLSKLFEDMSEKNMHVLRRALLTYGDYRLKVDSQKTLCVTSPRSATSLRMLFADRYQEPNLKQFLDDLSLETDINTQLKIRIKAYVANKNHPFDWRDCMIMYEALWDKRYLHPNLLYTRKMSGKFLLLRSSKASGYTYEVFITSLKSELDRSKSKLTELGLKIELWGNRSATDDHCLVIYKEKENVLATVRYDYTKKCFTVDRSGCFTMDEMVTHMLAHY
SIO_010081: PVA46_RS08350
subclass of: SO_0000673
so part of: PVA46_RS08350
location: 23770..25950
location: region:23770-25950:1
so has part: feature:23770-25950:1:exon

WP_167696546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23770-25950:1:exon

PVA46_RS08355
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08355
old locus tag: PVA46_08355
so part of: sequence
location: complement(26105..27931)
location: region:26105-27931:-1
so has part: feature:26105-27931:-1:exon
subclass of: SO_0000010

position:26105:-1
position: 26105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27931:-1
position: 27931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26105-27931:-1:exon

PVA46_RS08355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08355
old locus tag: PVA46_08355
inference: COORDINATES: protein motif:HMM:NF015210.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF262 domain-containing protein
translation: MDKIDAKYASIKSIFQSIVYTIPSYQRPYRWEEGQCETLWSDLEEFFFNQDESITSIDRTYFLGNIITVDSDEKKPNNEVFEVIDGQQRLTTLTLFLYALYEHLPEHVTLKQVLFQTEPDSIDEYFGLRIESKVNGKSEFYHLHNTLFDINQPFKKVDLESLSKHIPFANPNFHQNLEFFKAKICDPENGMQYTKDELKQWVNVILSKVFLLKIHTDNQDSALNIFTTINDRGLPLDAGERFKAELYLKAEEDHQEEAFIEAWDALLEGVDEFKELSLVAIFRSHMHLLKAKQTDISDEMGLVKFFQSSAYSLKSRYWRDTMDDLQKILGTESWLLEQKQGKERDHRTTALLLSILESSKKEAPKYAIIAYLFPRMEHNKESNKVYLRKEYYRSFIDFLENLIRFTYYSLFAKKGKDSLRADIIRLLPELVSGNKNIKWNDIASECKHKDALSNDALKKILDTGISGHTLKAMAMLRTYLAYKQESTPNPKLLPSNVAKIKFDQIIPKELKPEDNESIAKRDLINMQKKIGNLLVIEESGKIPKFTRSDWFSQKRIYLDALEHKTAEIIQFLETFTEENWSKEQFLEHQKNSVSKIYNFLRNYNMSTF
SIO_010081: PVA46_RS08355
subclass of: SO_0000673
so part of: PVA46_RS08355
location: complement(26105..27931)
location: region:26105-27931:-1
so has part: feature:26105-27931:-1:exon

WP_167696548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26105-27931:-1:exon

PVA46_RS08360
type: Gene
subclass of: SO_0000704
RO_0002162: 2719989
locus tag: PVA46_RS08360
old locus tag: PVA46_08360
so part of: sequence
location: complement(28039..28167)
location: region:28039-28167:-1
so has part: feature:28039-28167:-1:exon
subclass of: SO_0000010

position:28039:-1
position: 28039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28167:-1
position: 28167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28039-28167:-1:exon

PVA46_RS08360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2719989
locus tag: PVA46_RS08360
old locus tag: PVA46_08360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLHATETQQYQNSTIERRSSTVYSWILWIFEQMNGSLFDQIA
SIO_010081: PVA46_RS08360
subclass of: SO_0000673
so part of: PVA46_RS08360
location: complement(28039..28167)
location: region:28039-28167:-1
so has part: feature:28039-28167:-1:exon

WP_274360345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28039-28167:-1:exon