Vescimonas fastidiosa strain MM35 plasmid pMM35_01.
Bacteria; Firmicutes; Clostridia; Eubacteriales; Oscillospiraceae; Vescimonas.
Vescimonas gen. nov., Vescimonas coprocola sp. nov., Vescimonas fastidiosa sp. nov., Pusillimonas gen. nov. and Pusillimonas faecalis sp. nov. isolated from human faeces
Int. J. Syst. Evol. Microbiol. 71 (2021) In press
Submitted (03-SEP-2020) Contact:Yuko Shigeno RIKEN, Center for Brain Science; 2-1 Hirosawa, Wako-shi, Saitama 351-0198, Japan
REFSEQ INFORMATION: The reference sequence is identical to\nAP023416.1.\nAnnotated by DFAST v.1.2.3 (https://dfast.nig.ac.jp).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Flye v. 2.6\nGenome Coverage :: 3121X\nSequencing Technology :: Oxford Nanopore Technologies MinION;\n Illumina Miseq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/16/2022 03:47:11\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,427\nCDSs (total) :: 2,360\nGenes (coding) :: 2,298\nCDSs (with protein) :: 2,298\nGenes (RNA) :: 67\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 3\nPseudo Genes (total) :: 62\nCDSs (without protein) :: 62\nPseudo Genes (ambiguous residues) :: 0 of 62\nPseudo Genes (frameshifted) :: 30 of 62\nPseudo Genes (incomplete) :: 30 of 62\nPseudo Genes (internal stop) :: 5 of 62\nPseudo Genes (multiple problems) :: 3 of 62\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##
COORDINATES: similar to AA sequence:RefSeq:WP_011861958.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003417601.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009588269.1
COORDINATES: similar to AA sequence:RefSeq:WP_004613604.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008787614.1
COORDINATES: similar to AA sequence:RefSeq:WP_003062030.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
replication initiation factor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003061156.1
COORDINATES: similar to AA sequence:RefSeq:NP_464634.1
COORDINATES: similar to AA sequence:RefSeq:WP_002578899.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005339688.1
COORDINATES: similar to AA sequence:RefSeq:WP_004843359.1
COORDINATES: similar to AA sequence:RefSeq:WP_004843360.1
COORDINATES: similar to AA sequence:RefSeq:WP_009274602.1
COORDINATES: similar to AA sequence:RefSeq:WP_009898619.1
COORDINATES: similar to AA sequence:RefSeq:WP_002323347.1
COORDINATES: similar to AA sequence:RefSeq:WP_009243519.1
COORDINATES: similar to AA sequence:RefSeq:WP_011860758.1
COORDINATES: similar to AA sequence:RefSeq:WP_003061887.1
COORDINATES: similar to AA sequence:RefSeq:WP_019116014.1
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF015431.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
LysR family transcriptional regulator substrate-binding protein
COORDINATES: protein motif:HMM:NF024144.2
cadherin-like beta sandwich domain-containing protein
COORDINATES: protein motif:HMM:NF015557.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_015518023.1
PDDEXK nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF026010.2
COORDINATES: protein motif:HMM:NF025833.2
COORDINATES: protein motif:HMM:TIGR02937.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_016324037.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322556.1
COORDINATES: similar to AA sequence:RefSeq:WP_016324487.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015567319.1
COORDINATES: protein motif:HMM:NF024910.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003386828.1
COORDINATES: protein motif:HMM:TIGR01976.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019520.2
PucR family transcriptional regulator ligand-binding domain-containing protein
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF018271.2
COORDINATES: similar to AA sequence:RefSeq:WP_019850076.1
COORDINATES: protein motif:HMM:NF017007.2
COORDINATES: similar to AA sequence:RefSeq:WP_002587772.1
COORDINATES: similar to AA sequence:RefSeq:WP_008792065.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120301.1
COORDINATES: similar to AA sequence:RefSeq:WP_016320405.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019153492.1
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF027681.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005805105.1
COORDINATES: similar to AA sequence:RefSeq:WP_016320406.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009258845.1
4Fe-4S cluster-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006571089.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003527689.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF024598.2
COORDINATES: similar to AA sequence:RefSeq:WP_016320425.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016320424.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
histidinol-phosphatase HisJ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016320423.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016320422.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014115970.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016320419.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_015534220.1
COORDINATES: similar to AA sequence:RefSeq:WP_008704765.1
COORDINATES: similar to AA sequence:RefSeq:WP_009292265.1
COORDINATES: similar to AA sequence:RefSeq:WP_006906660.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006571966.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_016320536.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_006353479.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014080015.1
COORDINATES: protein motif:HMM:TIGR00147.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0001727 - lipid kinase activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013484326.1
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_015523917.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864586.1
COORDINATES: similar to AA sequence:RefSeq:WP_012450370.1
COORDINATES: similar to AA sequence:RefSeq:WP_016285623.1
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009257448.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: protein motif:HMM:NF017927.2
COORDINATES: similar to AA sequence:RefSeq:WP_016320412.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016320413.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_014115963.1
COORDINATES: similar to AA sequence:RefSeq:WP_014115964.1
COORDINATES: similar to AA sequence:RefSeq:WP_007489470.1
GO:0009055 - electron transfer activity [Evidence IEA]
RnfABCDGE type electron transport complex subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_005935155.1
RnfABCDGE type electron transport complex subunit B
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR04518.1
GO:0005215 - transporter activity [Evidence IEA]
folate family ECF transporter S component
COORDINATES: protein motif:HMM:NF016430.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009261482.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009261481.1
COORDINATES: similar to AA sequence:RefSeq:WP_015558168.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119547.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005812246.1
COORDINATES: similar to AA sequence:RefSeq:WP_016320588.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005342695.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103553.1
COORDINATES: similar to AA sequence:RefSeq:WP_016323611.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103558.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013345.2
COORDINATES: similar to AA sequence:RefSeq:WP_004078134.1
COORDINATES: protein motif:HMM:NF015515.2
COORDINATES: similar to AA sequence:RefSeq:WP_005999482.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119808.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_018595988.1
COORDINATES: similar to AA sequence:RefSeq:WP_002585169.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015552878.1
COORDINATES: similar to AA sequence:RefSeq:WP_009002312.1
glycerol-3-phosphate responsive antiterminator
COORDINATES: protein motif:HMM:TIGR01906.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322269.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_007285961.1
COORDINATES: protein motif:HMM:NF019305.2
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: similar to AA sequence:RefSeq:WP_005355259.1
COORDINATES: similar to AA sequence:RefSeq:WP_003498215.1
COORDINATES: similar to AA sequence:RefSeq:WP_011184939.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012435.2
COORDINATES: protein motif:HMM:TIGR00369.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119900.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322046.1
diacylglycerol kinase family lipid kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014119836.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002593129.1
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016322621.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014119834.1
COORDINATES: similar to AA sequence:RefSeq:WP_006779946.1
COORDINATES: similar to AA sequence:RefSeq:WP_015540655.1
COORDINATES: similar to AA sequence:RefSeq:WP_006426431.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005426317.1
COORDINATES: similar to AA sequence:RefSeq:WP_007493288.1
COORDINATES: similar to AA sequence:RefSeq:WP_015523695.1
DNA topoisomerase (ATP-hydrolyzing) subunit A
COORDINATES: protein motif:HMM:NF014732.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002574427.1
COORDINATES: similar to AA sequence:RefSeq:WP_002567331.1
COORDINATES: similar to AA sequence:RefSeq:WP_016148255.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_007488922.1
COORDINATES: similar to AA sequence:RefSeq:WP_006571207.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_008981194.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_007495660.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016322722.1
COORDINATES: similar to AA sequence:RefSeq:WP_006571865.1
COORDINATES: protein motif:HMM:NF015013.2
COORDINATES: similar to AA sequence:RefSeq:WP_016148140.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_019554916.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116166.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009257440.1
COORDINATES: protein motif:HMM:NF021118.2
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016322711.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018911733.1
COORDINATES: similar to AA sequence:RefSeq:WP_002605094.1
GO:0008478 - pyridoxal kinase activity [Evidence IEA]
GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF025636.2
COORDINATES: similar to AA sequence:RefSeq:WP_014116161.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014116158.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321726.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120365.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016322350.1
COORDINATES: similar to AA sequence:RefSeq:WP_014118685.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322405.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
Fe-S cluster assembly scaffold protein NifU
COORDINATES: similar to AA sequence:RefSeq:WP_005343880.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009325827.1
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_016320520.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014117998.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012424.2
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016323742.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_016320526.1
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_006789799.1
GO:0050661 - NADP binding [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF018513.2
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF037995.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014117986.1
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF018122.2
COORDINATES: protein motif:HMM:TIGR00621.2
COORDINATES: protein motif:HMM:NF039403.1
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: similar to AA sequence:RefSeq:WP_005332000.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530978.1
GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
RusA family crossover junction endodeoxyribonuclease
COORDINATES: protein motif:HMM:NF018437.2
COORDINATES: similar to AA sequence:RefSeq:WP_008470959.1
COORDINATES: similar to AA sequence:RefSeq:WP_008601678.1
COORDINATES: similar to AA sequence:RefSeq:WP_016622888.1
COORDINATES: protein motif:HMM:NF016988.2
COORDINATES: protein motif:HMM:NF016148.2
COORDINATES: protein motif:HMM:NF016754.2
COORDINATES: protein motif:HMM:NF037320.2
COORDINATES: similar to AA sequence:RefSeq:WP_006234177.1
COORDINATES: similar to AA sequence:RefSeq:WP_015313609.1
COORDINATES: protein motif:HMM:NF018329.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010922693.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017688.2
DUF859 family phage minor structural protein
COORDINATES: similar to AA sequence:RefSeq:WP_005938141.1
COORDINATES: similar to AA sequence:RefSeq:WP_018592636.1
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002596088.1
COORDINATES: protein motif:HMM:NF014683.2
GO:0015129 - lactate transmembrane transporter activity [Evidence IEA]
GO:0015727 - lactate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014128184.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120364.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_007494371.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016322080.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014120359.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_019420440.1
COORDINATES: protein motif:HMM:NF024112.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016322089.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_007494359.1
COORDINATES: protein motif:HMM:NF016959.2
COORDINATES: similar to AA sequence:RefSeq:WP_014120353.1
COORDINATES: similar to AA sequence:RefSeq:WP_006876657.1
COORDINATES: similar to AA sequence:RefSeq:WP_008980097.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: similar to AA sequence:RefSeq:WP_016322342.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322341.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003371719.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004843555.1
COORDINATES: similar to AA sequence:RefSeq:WP_007717269.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982116.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008982117.1
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_014117191.1
COORDINATES: similar to AA sequence:RefSeq:WP_008980059.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005377116.1
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_007488929.1
COORDINATES: similar to AA sequence:RefSeq:WP_009257128.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120421.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006353497.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_014120423.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016148870.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014115901.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_016322201.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009064943.1
COORDINATES: similar to AA sequence:RefSeq:WP_006570971.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009064926.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982343.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_008982344.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018305898.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: similar to AA sequence:RefSeq:WP_015557473.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009245506.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014116203.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322211.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005602200.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014120412.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009260531.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007491016.1
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008982322.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_009161693.1
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_005924306.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014120405.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_013486626.1
COORDINATES: similar to AA sequence:RefSeq:WP_008981200.1
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014120400.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016322236.1
COORDINATES: similar to AA sequence:RefSeq:WP_007490149.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008981271.1
COORDINATES: similar to AA sequence:RefSeq:WP_007490147.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: similar to AA sequence:RefSeq:WP_006571971.1
COORDINATES: similar to AA sequence:RefSeq:WP_009258114.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_009063506.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120382.1
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006353973.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982314.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982348.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014115910.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01441.2
GO:0004175 - endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013497369.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120378.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006571894.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015326060.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120375.1
COORDINATES: similar to AA sequence:RefSeq:WP_007495945.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321902.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
putative manganese-dependent inorganic diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_009253497.1
COORDINATES: similar to AA sequence:RefSeq:WP_008399956.1
COORDINATES: similar to AA sequence:RefSeq:WP_007493652.1
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:NF021561.2
COORDINATES: protein motif:HMM:NF013381.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255312.1
COORDINATES: similar to AA sequence:RefSeq:WP_006057951.1
COORDINATES: similar to AA sequence:RefSeq:WP_016609601.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014119687.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_007493369.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119685.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_014119684.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_014119683.1
COORDINATES: similar to AA sequence:RefSeq:WP_016320344.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008977422.1
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: similar to AA sequence:RefSeq:WP_018598364.1
COORDINATES: similar to AA sequence:RefSeq:WP_009066055.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322996.1
COORDINATES: similar to AA sequence:RefSeq:WP_012960646.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120368.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_016322428.1
COORDINATES: similar to AA sequence:RefSeq:WP_008980101.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014120318.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_016322424.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004098252.1
COORDINATES: similar to AA sequence:RefSeq:WP_006781275.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322142.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014117241.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005998729.1
COORDINATES: similar to AA sequence:RefSeq:WP_005979705.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005350883.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016320552.1
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006572864.1
COORDINATES: protein motif:HMM:NF018591.2
COORDINATES: similar to AA sequence:RefSeq:WP_016320542.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119383.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009279520.1
COORDINATES: similar to AA sequence:RefSeq:WP_005363900.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116528.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014116564.1
COORDINATES: similar to AA sequence:RefSeq:WP_009257528.1
COORDINATES: similar to AA sequence:RefSeq:WP_007495691.1
COORDINATES: similar to AA sequence:RefSeq:WP_007495083.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119832.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014119831.1
COORDINATES: protein motif:HMM:NF013417.2
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016322731.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007495066.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014119827.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119826.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016322735.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
GO:0006747 - FAD biosynthetic process [Evidence IEA]; GO:0009398 - FMN biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
PP2C family serine/threonine-protein phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_014116896.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322739.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_014118511.1
COORDINATES: similar to AA sequence:RefSeq:WP_014118512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187192.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_008982384.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322264.1
COORDINATES: similar to AA sequence:RefSeq:WP_014117853.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007490771.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322464.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119494.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322060.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016322059.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014119490.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02227.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008981221.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606296.1
COORDINATES: similar to AA sequence:RefSeq:WP_005943319.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_006875413.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982113.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586268.1
COORDINATES: similar to AA sequence:RefSeq:WP_016320475.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF014232.2
COORDINATES: similar to AA sequence:RefSeq:WP_016320477.1
COORDINATES: similar to AA sequence:RefSeq:WP_003379724.1
COORDINATES: similar to AA sequence:RefSeq:WP_016320353.1
COORDINATES: similar to AA sequence:RefSeq:WP_016320352.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003404871.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008981157.1
COORDINATES: similar to AA sequence:RefSeq:WP_011984667.1
COORDINATES: similar to AA sequence:RefSeq:WP_016148815.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020711.2
COORDINATES: similar to AA sequence:RefSeq:WP_007491086.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016320636.1
COORDINATES: similar to AA sequence:RefSeq:WP_005926410.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014116427.1
COORDINATES: similar to AA sequence:RefSeq:WP_009257447.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014117201.1
COORDINATES: similar to AA sequence:RefSeq:WP_006780274.1
COORDINATES: similar to AA sequence:RefSeq:WP_014117203.1
COORDINATES: similar to AA sequence:RefSeq:WP_007713965.1
COORDINATES: similar to AA sequence:RefSeq:WP_005922033.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007488970.1
COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014116857.1
COORDINATES: similar to AA sequence:RefSeq:WP_001127258.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016320993.1
COORDINATES: similar to AA sequence:RefSeq:WP_019680102.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982630.1
COORDINATES: similar to AA sequence:RefSeq:WP_009065523.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573408.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116864.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107915.1
COORDINATES: similar to AA sequence:RefSeq:WP_009243086.1
COORDINATES: similar to AA sequence:RefSeq:WP_015924311.1
COORDINATES: similar to AA sequence:RefSeq:WP_015537247.1
COORDINATES: similar to AA sequence:RefSeq:WP_001080834.1
COORDINATES: similar to AA sequence:RefSeq:WP_002836123.1
COORDINATES: similar to AA sequence:RefSeq:WP_000245511.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321006.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000628816.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116874.1
COORDINATES: similar to AA sequence:RefSeq:WP_007494630.1
COORDINATES: similar to AA sequence:RefSeq:WP_004888697.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116877.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016321012.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009258088.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321014.1
KOW domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_001029884.1
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_000090788.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007494608.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564648.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014116886.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014116887.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_015391554.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: protein motif:HMM:NF014351.2
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF014685.2
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005815802.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461078.1
COORDINATES: similar to AA sequence:RefSeq:WP_020816196.1
COORDINATES: protein motif:HMM:NF012622.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
dockerin type I domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015552969.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982794.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119416.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_006874428.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321320.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014119413.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009257749.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_016321326.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016321569.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_008374947.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF018613.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040142.1
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: similar to AA sequence:RefSeq:WP_015359351.1
COORDINATES: similar to AA sequence:RefSeq:WP_007048001.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005426290.1
COORDINATES: similar to AA sequence:RefSeq:WP_007047999.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007495858.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_016147581.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013979385.1
COORDINATES: similar to AA sequence:RefSeq:WP_002584659.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006573056.1
COORDINATES: protein motif:HMM:NF015049.2
COORDINATES: similar to AA sequence:RefSeq:WP_009143510.1
COORDINATES: similar to AA sequence:RefSeq:WP_015525247.1
COORDINATES: similar to AA sequence:RefSeq:WP_007882619.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161331.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014116178.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982822.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006574282.1
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017141831.1
COORDINATES: similar to AA sequence:RefSeq:WP_002382857.1
COORDINATES: similar to AA sequence:RefSeq:WP_018112836.1
COORDINATES: similar to AA sequence:RefSeq:WP_007037036.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016147847.1
COORDINATES: similar to AA sequence:RefSeq:WP_002569231.1
COORDINATES: similar to AA sequence:RefSeq:WP_015537038.1
COORDINATES: similar to AA sequence:RefSeq:WP_002593561.1
COORDINATES: similar to AA sequence:RefSeq:WP_002584331.1
COORDINATES: similar to AA sequence:RefSeq:WP_002569227.1
COORDINATES: similar to AA sequence:RefSeq:WP_009251547.1
COORDINATES: similar to AA sequence:RefSeq:WP_002569225.1
COORDINATES: similar to AA sequence:RefSeq:WP_016287112.1
COORDINATES: similar to AA sequence:RefSeq:WP_005426572.1
COORDINATES: similar to AA sequence:RefSeq:WP_009274461.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
CHC2 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005945226.1
COORDINATES: similar to AA sequence:RefSeq:WP_009249737.1
COORDINATES: similar to AA sequence:RefSeq:WP_004612760.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002585508.1
COORDINATES: similar to AA sequence:RefSeq:WP_002574003.1
COORDINATES: similar to AA sequence:RefSeq:WP_005361089.1
COORDINATES: similar to AA sequence:RefSeq:WP_002370797.1
COORDINATES: similar to AA sequence:RefSeq:WP_002317289.1
COORDINATES: similar to AA sequence:RefSeq:WP_003508252.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934786.1
COORDINATES: similar to AA sequence:RefSeq:WP_003510902.1
COORDINATES: similar to AA sequence:RefSeq:WP_004081466.1
COORDINATES: similar to AA sequence:RefSeq:WP_007055124.1
COORDINATES: similar to AA sequence:RefSeq:WP_005922872.1
COORDINATES: similar to AA sequence:RefSeq:WP_007860200.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292370.1
COORDINATES: similar to AA sequence:RefSeq:WP_002417119.1
COORDINATES: similar to AA sequence:RefSeq:WP_005602875.1
transposon-transfer assisting family protein
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003431270.1
COORDINATES: similar to AA sequence:RefSeq:WP_015536569.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005338852.1
AbiEi antitoxin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005922864.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004802658.1
MobC family plasmid mobilization relaxosome protein
COORDINATES: similar to AA sequence:RefSeq:WP_002584957.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073027.1
COORDINATES: similar to AA sequence:RefSeq:WP_006058378.1
COORDINATES: similar to AA sequence:RefSeq:WP_008393108.1
PLDc N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004608157.1
COORDINATES: similar to AA sequence:RefSeq:WP_006058382.1
COORDINATES: similar to AA sequence:RefSeq:WP_019595630.1
cysteine-rich KTR domain-containing protein
COORDINATES: protein motif:HMM:NF019886.2
COORDINATES: similar to AA sequence:RefSeq:WP_016292193.1
COORDINATES: protein motif:HMM:NF025565.2
COORDINATES: similar to AA sequence:RefSeq:WP_008396258.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934801.1
COORDINATES: similar to AA sequence:RefSeq:WP_008816183.1
COORDINATES: similar to AA sequence:RefSeq:WP_008816182.1
phage antirepressor KilAC domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006573571.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564500.1
COORDINATES: similar to AA sequence:RefSeq:WP_007046100.1
COORDINATES: similar to AA sequence:RefSeq:WP_002595174.1
COORDINATES: similar to AA sequence:RefSeq:WP_007593032.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564501.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934790.1
COORDINATES: similar to AA sequence:RefSeq:WP_007046105.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573552.1
COORDINATES: similar to AA sequence:RefSeq:WP_008396832.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934785.1
COORDINATES: similar to AA sequence:RefSeq:WP_007046110.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934783.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564507.1
phosphoadenosine phosphosulfate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_008816169.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573531.1
COORDINATES: similar to AA sequence:RefSeq:WP_007592997.1
COORDINATES: similar to AA sequence:RefSeq:WP_008816166.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573528.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564511.1
COORDINATES: similar to AA sequence:RefSeq:WP_007046127.1
COORDINATES: similar to AA sequence:RefSeq:WP_008816164.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564514.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564515.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573514.1
COORDINATES: similar to AA sequence:RefSeq:WP_008816154.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934759.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_008816153.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564524.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982947.1
COORDINATES: similar to AA sequence:RefSeq:WP_013852041.1
ClbS/DfsB family four-helix bundle protein
COORDINATES: similar to AA sequence:RefSeq:WP_007046143.1
COORDINATES: similar to AA sequence:RefSeq:WP_008816149.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573506.1
COORDINATES: similar to AA sequence:RefSeq:WP_010696715.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982901.1
COORDINATES: similar to AA sequence:RefSeq:WP_015512765.1
COORDINATES: similar to AA sequence:RefSeq:WP_005342546.1
COORDINATES: similar to AA sequence:RefSeq:WP_015559434.1
COORDINATES: similar to AA sequence:RefSeq:WP_015522580.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934750.1
COORDINATES: similar to AA sequence:RefSeq:WP_008396790.1
COORDINATES: similar to AA sequence:RefSeq:WP_007838609.1
COORDINATES: similar to AA sequence:RefSeq:WP_002607552.1
COORDINATES: similar to AA sequence:RefSeq:WP_000847902.1
GO:0046872 - metal ion binding [Evidence IEA]
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007046150.1
COORDINATES: similar to AA sequence:RefSeq:WP_008816143.1
COORDINATES: similar to AA sequence:RefSeq:WP_007046152.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934745.1
COORDINATES: similar to AA sequence:RefSeq:WP_007592958.1
COORDINATES: similar to AA sequence:RefSeq:WP_009323469.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934741.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934739.1
COORDINATES: similar to AA sequence:RefSeq:WP_009323467.1
COORDINATES: similar to AA sequence:RefSeq:WP_007046157.1
COORDINATES: similar to AA sequence:RefSeq:WP_007046158.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564536.1
COORDINATES: similar to AA sequence:RefSeq:WP_005934733.1
COORDINATES: protein motif:HMM:NF019149.2
COORDINATES: protein motif:HMM:NF013500.2
COORDINATES: similar to AA sequence:RefSeq:WP_013298924.1
sporulation transcriptional regulator SpoIIID
COORDINATES: similar to AA sequence:RefSeq:WP_008979999.1
COORDINATES: similar to AA sequence:RefSeq:WP_002569856.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01085.1
UDP-N-acetylmuramyl-tripeptide synthetase
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_016321043.1
COORDINATES: similar to AA sequence:RefSeq:WP_006873126.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009322354.1
COORDINATES: similar to AA sequence:RefSeq:WP_004613699.1
COORDINATES: similar to AA sequence:RefSeq:WP_015529853.1
COORDINATES: similar to AA sequence:RefSeq:WP_019162974.1
COORDINATES: similar to AA sequence:RefSeq:WP_019162975.1
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015558406.1
COORDINATES: similar to AA sequence:RefSeq:WP_006354195.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358003.1
COORDINATES: similar to AA sequence:RefSeq:WP_016147303.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116673.1
pro-sigmaK processing inhibitor BofA family protein
COORDINATES: protein motif:HMM:NF022165.2
COORDINATES: similar to AA sequence:RefSeq:WP_008982263.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116938.1
COORDINATES: similar to AA sequence:RefSeq:WP_009259157.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322182.1
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: similar to AA sequence:RefSeq:WP_006574552.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120339.1
COORDINATES: similar to AA sequence:RefSeq:WP_009063651.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322131.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00380
The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004801538.1
UDP-N-acetylglucosamine pyrophosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_009258974.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005842085.1
COORDINATES: similar to AA sequence:RefSeq:WP_015530650.1
COORDINATES: similar to AA sequence:RefSeq:WP_001137493.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073575.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007495837.1
COORDINATES: similar to AA sequence:RefSeq:WP_004331687.1
COORDINATES: similar to AA sequence:RefSeq:WP_017754017.1
COORDINATES: protein motif:HMM:NF017452.2
COORDINATES: protein motif:HMM:NF013232.2
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_009325604.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007490927.1
COORDINATES: similar to AA sequence:RefSeq:WP_009261315.1
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_016320492.1
COORDINATES: similar to AA sequence:RefSeq:WP_007050662.1
COORDINATES: similar to AA sequence:RefSeq:WP_013486546.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321545.1
COORDINATES: similar to AA sequence:RefSeq:WP_002844018.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016321546.1
COORDINATES: protein motif:HMM:NF027438.2
COORDINATES: similar to AA sequence:RefSeq:WP_009259257.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321064.1
COORDINATES: similar to AA sequence:RefSeq:WP_009060820.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007495367.1
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_007495349.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008980238.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007495341.1
COORDINATES: similar to AA sequence:RefSeq:WP_014118435.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008981066.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014118433.1
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: similar to AA sequence:RefSeq:WP_008981064.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014118431.1
GO:0000036 - acyl carrier activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016324071.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019679741.1
ferredoxin thioredoxin reductase catalytic beta chain
COORDINATES: similar to AA sequence:RefSeq:WP_005946400.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016285911.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_016322187.1
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: similar to AA sequence:RefSeq:WP_016322108.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116445.1
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_016320979.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016320980.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_007490892.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008982603.1
COORDINATES: similar to AA sequence:RefSeq:WP_013075123.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006573357.1
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_014116519.1
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_016322868.1
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: similar to AA sequence:RefSeq:WP_002567269.1
COORDINATES: protein motif:HMM:NF015211.2
COORDINATES: protein motif:HMM:NF016233.2
COORDINATES: protein motif:HMM:TIGR04387.1
GO:0019028 - viral capsid [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005931267.1
COORDINATES: protein motif:HMM:NF013625.2
peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015537771.1
COORDINATES: similar to AA sequence:RefSeq:WP_003531748.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573351.1
COORDINATES: similar to AA sequence:RefSeq:WP_010755308.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005602079.1
COORDINATES: protein motif:HMM:NF037374.2
COORDINATES: similar to AA sequence:RefSeq:WP_004611981.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541467.1
COORDINATES: similar to AA sequence:RefSeq:WP_009325144.1
COORDINATES: similar to AA sequence:RefSeq:WP_003500118.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
Type 1 glutamine amidotransferase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008711065.1
COORDINATES: protein motif:HMM:NF039835.1
COORDINATES: similar to AA sequence:RefSeq:WP_016148579.1
COORDINATES: similar to AA sequence:RefSeq:WP_005363889.1
pyrroloquinoline quinone biosynthesis protein PqqE
COORDINATES: similar to AA sequence:RefSeq:WP_009165130.1
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF012488.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008407721.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013380347.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: similar to AA sequence:RefSeq:WP_014487498.1
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_007491956.1
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: similar to AA sequence:RefSeq:WP_016321862.1
COORDINATES: protein motif:HMM:NF021617.2
5-bromo-4-chloroindolyl phosphate hydrolysis family protein
COORDINATES: protein motif:HMM:NF039476.1
COORDINATES: similar to AA sequence:RefSeq:WP_014117253.1
COORDINATES: similar to AA sequence:RefSeq:WP_005351733.1
COORDINATES: similar to AA sequence:RefSeq:WP_012743224.1
COORDINATES: similar to AA sequence:RefSeq:WP_009271880.1
COORDINATES: similar to AA sequence:RefSeq:WP_002262306.1
COORDINATES: similar to AA sequence:RefSeq:WP_009264382.1
COORDINATES: similar to AA sequence:RefSeq:WP_009269712.1
COORDINATES: similar to AA sequence:RefSeq:WP_002317271.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000108743.1
topoisomerase DNA-binding C4 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011100845.1
23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)
COORDINATES: similar to AA sequence:RefSeq:WP_001814874.1
GO:0046677 - response to antibiotic [Evidence IEA]
23S rRNA methyltransferase attenuation leader peptide
COORDINATES: similar to AA sequence:RefSeq:WP_007286199.1
COORDINATES: similar to AA sequence:RefSeq:WP_011860752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004612099.1
COORDINATES: similar to AA sequence:RefSeq:WP_003061243.1
COORDINATES: similar to AA sequence:RefSeq:WP_005342572.1
bifunctional lysozyme/C40 family peptidase