Chionomys nivalis chromosome Y, mChiNiv1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Chionomys.
REFSEQ INFORMATION: The reference sequence is identical to\nOX465475.1.\nAssembly name: mChiNiv1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the WELLCOME SANGER INSTITUTE on\n2023/05/01. The original whole-genome shotgun project has the\naccession CATLKQ000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_950005125.1-RS_2023_06\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 06/26/2023\n##Genome-Annotation-Data-END##
histone-binding protein RBBP4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
uncharacterized LOC130868868; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon.
sperm motility kinase Z-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
deleted in azoospermia-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
spindlin-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
high mobility group protein B1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
protein mono-ADP-ribosyltransferase PARP11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein mono-ADP-ribosyltransferase PARP11-like, transcript variant X1
protein mono-ADP-ribosyltransferase PARP11-like isoform X1
protein mono-ADP-ribosyltransferase PARP11-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
protein mono-ADP-ribosyltransferase PARP11-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
olfactory receptor 2AK2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
N-lysine methyltransferase KMT5A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP synthase F(0) complex subunit C1, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP synthase F(0) complex subunit C1, mitochondrial-like
uncharacterized LOC130868805; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
60S ribosomal protein L6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
eukaryotic translation initiation factor 2 subunit 3, Y-linked-like; Derived by automated computational analysis using gene prediction method: Gnomon.
eukaryotic translation initiation factor 2 subunit 3, Y-linked-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins
ankyrin repeat domain-containing protein 11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain-containing protein 11-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 10 bases in 7 codons; deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 10 bases in 7 codons; deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 11-like
ubiquitin-like modifier-activating enzyme 1 Y; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
probable ubiquitin carboxyl-terminal hydrolase FAF-X; Derived by automated computational analysis using gene prediction method: Gnomon.
probable ubiquitin carboxyl-terminal hydrolase FAF-X
glyceraldehyde-3-phosphate dehydrogenase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00026
Derived by automated computational analysis using gene prediction method: cmsearch.
zinc finger Y-chromosomal protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger Y-chromosomal protein 2-like, transcript variant X2
zinc finger Y-chromosomal protein 2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
zinc finger Y-chromosomal protein 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
zinc finger Y-chromosomal protein 2-like isoform X2
zinc finger Y-chromosomal protein-like isoform X3
zinc finger Y-chromosomal protein 2-like isoform X1
ubiquitin-activating enzyme E1 Y-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
sepiapterin reductase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
ATP synthase subunit f, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
histone demethylase UTY; Derived by automated computational analysis using gene prediction method: Gnomon.
histone demethylase UTY, transcript variant X2
histone demethylase UTY, transcript variant X3
histone demethylase UTY, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
histone demethylase UTY, transcript variant X4
histone demethylase UTY, transcript variant X1
uracil-DNA glycosylase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins
probable ribosome biogenesis protein RLP24; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
RNA-binding motif protein, Y chromosome, family 1 member B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA-binding motif protein, Y chromosome, family 1 member B-like
suppressor of cytokine signaling 6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
small nucleolar RNA SNORA67; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00272
ubiquitin-like modifier-activating enzyme 1 Y
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1 Y
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: RNA-binding motif protein, Y chromosome, family 1 member B-like
RAC-beta serine/threonine-protein kinase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 125 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 127 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 153 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
peptidyl-prolyl cis-trans isomerase FKBP8-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
lysine-specific demethylase 5D; Derived by automated computational analysis using gene prediction method: Gnomon.
lysine-specific demethylase 5D, transcript variant X1
lysine-specific demethylase 5D, transcript variant X2
lysine-specific demethylase 5D isoform X1
lysine-specific demethylase 5D isoform X2
lysine-specific demethylase 5D, transcript variant X4
lysine-specific demethylase 5D, transcript variant X3
lysine-specific demethylase 5D isoform X3
zinc finger Y-chromosomal protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 147 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
probable ribosome biogenesis protein RLP24
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99 Proteins
transmembrane protein 132B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92 Proteins
40S ribosomal protein S5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
high mobility group protein B3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphate-regulating neutral endopeptidase PHEX; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphate-regulating neutral endopeptidase PHEX