Salvelinus alpinus isolate IW2-2015 linkage group LG37, ASM291031v2, whole genome shotgun sequence.
type: Entry
definition: Salvelinus alpinus isolate IW2-2015 linkage group LG37, ASM291031v2, whole genome shotgun sequence.
sequence version: NC_036876.1
sequence date: 2018-02-25
sequence: sequence
division: CON
label: NC_036876.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA433373
dblink: SAMN06561764
keyword: WGS
keyword: RefSeq
source: Salvelinus alpinus (Arctic char)
organism: Salvelinus alpinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM009428.1.\nAssembly name: ASM291031v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Victoria on\n2018/02/02. The original whole-genome shotgun project has the\naccession PPUY00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Victoria\nAssembly Date :: OCT-2017\nAssembly Method :: AllPaths v. 52488; PBSuite v. 15.8.24;\n SSpace-LongRead v. 1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 146.0x\nSequencing Technology :: Illumina Paired-End; Illumina Mate-Pair;\n PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Salvelinus alpinus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 19546989
topology: linear
so has quality: SO_0000987
location: 1..19546989
location: region:1-19546989:1
RO_0002162: 8036

NC_036876
type: RefSeq
SIO_000068: refseq

PRJNA433373
type: BioProject
SIO_000068: bioproject

SAMN06561764
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19546989:1
position: 19546989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19546989:1:source
so part of: sequence
organism: Salvelinus alpinus
mol type: genomic DNA
isolate: IW2-2015
tissue type: liver
dev stage: juvenile
collected by: Jon Lucas
linkage group: LG37

8036
type: Taxonomy
SIO_000068: taxonomy

LOC111960116
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 20622..31831
location: region:20622-31831:1
so has part: feature:20622-31831:1:exon
subclass of: SO_0000010

111960116
type: Gene
SIO_000068: ncbigene

position:20622:1
position: 20622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31831:1
position: 31831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20622-31831:1:exon

LOC111960116
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960116
product: arrestin red cell-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982022.1
SIO_010081: LOC111960116
subclass of: SO_0000673
so part of: LOC111960116
location: join(20622..20858,24127..24191,29751..29827,29927..29981,30105..31831)
location: region:20622-31831:1
so has part: feature:20622-20858:1:exon
so has part: feature:24127-24191:1:exon
so has part: feature:29751-29827:1:exon
so has part: feature:29927-29981:1:exon
so has part: feature:30105-31831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20622-20858:1:exon

position:20858:1
position: 20858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24127-24191:1:exon

position:24127:1
position: 24127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24191:1
position: 24191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29751-29827:1:exon

position:29751:1
position: 29751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29827:1
position: 29827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29927-29981:1:exon

position:29927:1
position: 29927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29981:1
position: 29981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30105-31831:1:exon

position:30105:1
position: 30105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960116
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arrestin red cell-like
translation: MHEASNEGPPVREASSDGRHSGASRDGCQSAVPASTRVNPVAGPQQRGCQVRGPHEGLQSGAAGECPHTRSITKRGEPEEVLGILVSLQSQGQTSGCSRGGDVSVELPFVLMHPKPSDLPISRPQSVVPETYAPVGSNLIEFETNNFSQDDDFVFEDFARLRLKGTKDDEDDHLC
SIO_010081: LOC111960116
subclass of: SO_0000673
so part of: LOC111960116
location: join(20622..20858,24127..24191,29751..29827,29927..29981,30105..30198)
location: region:20622-30198:1
so has part: feature:20622-20858:1:exon
so has part: feature:24127-24191:1:exon
so has part: feature:29751-29827:1:exon
so has part: feature:29927-29981:1:exon
so has part: feature:30105-30198:1:exon

XP_023837790.1
type: Protein
SIO_000068: ncbiprotein

position:30198:1
position: 30198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20622-20858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24127-24191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29751-29827:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29927-29981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30105-30198:1:exon

LOC111960068
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960068
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 32896..35251
location: region:32896-35251:1
so has part: feature:32896-35251:1:exon
subclass of: SO_0000011

111960068
type: Gene
SIO_000068: ncbigene

position:32896:1
position: 32896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35251:1
position: 35251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32896-35251:1:exon

LOC111960068
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960068
product: uncharacterized LOC111960068
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XR_002876762.1
SIO_010081: LOC111960068
subclass of: SO_0000673
so part of: LOC111960068
location: join(32896..32999,33194..35251)
location: region:32896-35251:1
so has part: feature:32896-32999:1:exon
so has part: feature:33194-35251:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32896-32999:1:exon

position:32999:1
position: 32999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33194-35251:1:exon

position:33194:1
position: 33194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960066
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(35325..37595)
location: region:35325-37595:-1
so has part: feature:35325-37595:-1:exon
subclass of: SO_0000010

111960066
type: Gene
SIO_000068: ncbigene

position:35325:-1
position: 35325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37595:-1
position: 37595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35325-37595:-1:exon

LOC111960066
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960066
product: mediator of RNA polymerase II transcription subunit 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023981974.1
SIO_010081: LOC111960066
subclass of: SO_0000673
so part of: LOC111960066
location: complement(join(35325..35699,36563..36693,37357..37595))
location: region:35325-37595:-1
so has part: feature:37357-37595:-1:exon
so has part: feature:36563-36693:-1:exon
so has part: feature:35325-35699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37357-37595:-1:exon

position:37357:-1
position: 37357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36563-36693:-1:exon

position:36563:-1
position: 36563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36693:-1
position: 36693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35325-35699:-1:exon

position:35699:-1
position: 35699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 11
translation: MANDRLRALEEVENQIATILQCAGNIVLELSKDKHNASFLDRQLSQFTGSVSRVETELSSQIKYLTQVATGQPHEGSTYSARKDCQMALNRAEYARVKLGELGRTCEVMLDPQP
SIO_010081: LOC111960066
subclass of: SO_0000673
so part of: LOC111960066
location: complement(join(35556..35699,36563..36693,37357..37426))
location: region:35556-37426:-1
so has part: feature:37357-37426:-1:exon
so has part: feature:36563-36693:-1:exon
so has part: feature:35556-35699:-1:exon

XP_023837742.1
type: Protein
SIO_000068: ncbiprotein

position:35556:-1
position: 35556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37426:-1
position: 37426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37357-37426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36563-36693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35556-35699:-1:exon

LOC111960117
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 37656..57564
location: region:37656-57564:1
so has part: feature:37656-57564:1:exon
subclass of: SO_0000010

111960117
type: Gene
SIO_000068: ncbigene

position:37656:1
position: 37656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57564:1
position: 57564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37656-57564:1:exon

LOC111960117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960117
product: proline-, glutamic acid- and leucine-rich protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982023.1
SIO_010081: LOC111960117
subclass of: SO_0000673
so part of: LOC111960117
location: join(37656..37837,38072..38242,38882..39031,45717..45788,47194..47410,47528..47660,47834..47921,48011..48099,48447..48560,48698..48848,49053..49212,49423..49478,49584..49720,49751..49808,52652..53491,53791..54789,56695..57564)
location: region:37656-57564:1
so has part: feature:37656-37837:1:exon
so has part: feature:38072-38242:1:exon
so has part: feature:38882-39031:1:exon
so has part: feature:45717-45788:1:exon
so has part: feature:47194-47410:1:exon
so has part: feature:47528-47660:1:exon
so has part: feature:47834-47921:1:exon
so has part: feature:48011-48099:1:exon
so has part: feature:48447-48560:1:exon
so has part: feature:48698-48848:1:exon
so has part: feature:49053-49212:1:exon
so has part: feature:49423-49478:1:exon
so has part: feature:49584-49720:1:exon
so has part: feature:49751-49808:1:exon
so has part: feature:52652-53491:1:exon
so has part: feature:53791-54789:1:exon
so has part: feature:56695-57564:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37656-37837:1:exon

position:37837:1
position: 37837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38072-38242:1:exon

position:38072:1
position: 38072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38242:1
position: 38242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38882-39031:1:exon

position:38882:1
position: 38882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39031:1
position: 39031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45717-45788:1:exon

position:45717:1
position: 45717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45788:1
position: 45788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47194-47410:1:exon

position:47194:1
position: 47194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47410:1
position: 47410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47528-47660:1:exon

position:47528:1
position: 47528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47660:1
position: 47660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:47834-47921:1:exon

position:47834:1
position: 47834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47921:1
position: 47921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:48011-48099:1:exon

position:48011:1
position: 48011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48099:1
position: 48099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:48447-48560:1:exon

position:48447:1
position: 48447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48560:1
position: 48560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:48698-48848:1:exon

position:48698:1
position: 48698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48848:1
position: 48848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:49053-49212:1:exon

position:49053:1
position: 49053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49212:1
position: 49212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:49423-49478:1:exon

position:49423:1
position: 49423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49478:1
position: 49478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:49584-49720:1:exon

position:49584:1
position: 49584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49720:1
position: 49720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:49751-49808:1:exon

position:49751:1
position: 49751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49808:1
position: 49808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:52652-53491:1:exon

position:52652:1
position: 52652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53491:1
position: 53491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:53791-54789:1:exon

position:53791:1
position: 53791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54789:1
position: 54789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:56695-57564:1:exon

position:56695:1
position: 56695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-, glutamic acid- and leucine-rich protein 1
translation: MAATAAWMHGPANMRLAEGLVSVLKEQRPEYLPALLANYREHGVVSTQSSAAVGGLVGLSNAKLGNSKTRFEGLCLLSVLVKDSSSDVFQQHCLSWLRSLQQVIQSQAPLPSIQLAVGVLQDLLQYSSQLPELAREVGLNSILGILTSLLGLKSEFHLAAMEGMTACMTFYPRACGSLRDKLGACFLSKMDSVNPEVQEVACECYGRLPCLGGVLERGGGGRRAEGWTNQLHCLLASANGMLAQLYQGTESEGMVPYEGPGVELPYPPLDDTDPLVLLQLQHRYRGVCLALKHTLSVDPASAVRLPVQQVLNLVCRALAVSSKSINLTGDGSVRLLVLPSIHDHSVKVLHALITAVGSGLVQYSSVLQRLFSQTLSAWTPLPETNLGQQRAFSAVRVSLYRTLELWVKVGGASAGVLQGSPTHSEILLAHLLGDITPGADSVRLRAGQSTVADLVSSKPCPKSRKPGLGMGNGGGASLQRKGDSLANQDTCMSALRALRQIILTSGTLLKEDVHKRLHDVVLPYGVYACSSSMGETVGPGWGVSGQYGSALPRRELYVCSYPPSLYGVHTRHGRRDRSLEVSSFCTEALTVCNSLLHPRTPSLCLPLPPLTLKPSPAASLLTPSQASNLTLPTLLGGPFPGRHSLGLGHTLLGSLDNHLSLVPPGLSGQGSTPGDLLLSPHQGELAGLGLSEGQRPVFIRYDKEEAEDVEISLESDSDDSVVIFPRGMLMLENQDGTSTVATLPVSSLVPGGVTLPVPGPGDDPGGDISLPLANDLPSTSLPHPLLPSSSAPNSINSFPPAPLASLVPPLNSTGVTQLGAPSVGLGVGADSLPGAQLQQMLLQGQPPVPGQPTSLGLPIQMLQNQLAQPSRALQQQQASEEDHSVININSSDEEEEEDEEMEDEDELGEEEDEEGLEDEEEEEEGSDFPDEEEEFYGEEFDDYEEEEGEEMEEEEEEEEEEEEEGEIRSLDREGRRGGMGREEGEVLREVPEDGGMGGFCVEGEMEGGIEELGTNRRVYGEEGVKAQEVESIGVLEEEREGEEDDADGMNDPTMPQILCVTGGALEEREELGEGHGQEVGSCEQQGADRPEATPSSEGPAPQHKQEAEPAQEVRVGGSDQPSNQGEEPAKQGGDSAKEEVKPSAAPSETEGEEPEREKGGEEREEDGEEDGRGMKRKREGEEEGTGQGTEKKKLDEEVMASMLADFVACPPDDEEKGPSASNLPS
SIO_010081: LOC111960117
subclass of: SO_0000673
so part of: LOC111960117
location: join(37694..37837,38072..38242,38882..39031,45717..45788,47194..47410,47528..47660,47834..47921,48011..48099,48447..48560,48698..48848,49053..49212,49423..49478,49584..49720,49751..49808,52652..53491,53791..54789,56695..56793)
location: region:37694-56793:1
so has part: feature:37694-37837:1:exon
so has part: feature:38072-38242:1:exon
so has part: feature:38882-39031:1:exon
so has part: feature:45717-45788:1:exon
so has part: feature:47194-47410:1:exon
so has part: feature:47528-47660:1:exon
so has part: feature:47834-47921:1:exon
so has part: feature:48011-48099:1:exon
so has part: feature:48447-48560:1:exon
so has part: feature:48698-48848:1:exon
so has part: feature:49053-49212:1:exon
so has part: feature:49423-49478:1:exon
so has part: feature:49584-49720:1:exon
so has part: feature:49751-49808:1:exon
so has part: feature:52652-53491:1:exon
so has part: feature:53791-54789:1:exon
so has part: feature:56695-56793:1:exon

XP_023837791.1
type: Protein
SIO_000068: ncbiprotein

position:37694:1
position: 37694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56793:1
position: 56793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37694-37837:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38072-38242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38882-39031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45717-45788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47194-47410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47528-47660:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47834-47921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48011-48099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48447-48560:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:48698-48848:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:49053-49212:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:49423-49478:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:49584-49720:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:49751-49808:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52652-53491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:53791-54789:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56695-56793:1:exon

LOC111960468
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 60399..64324
location: region:60399-64324:1
so has part: feature:60399-64324:1:exon
subclass of: SO_0000011

111960468
type: Gene
SIO_000068: ncbigene

position:60399:1
position: 60399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64324:1
position: 64324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60399-64324:1:exon

LOC111960468
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960468
product: uncharacterized LOC111960468
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XR_002876849.1
SIO_010081: LOC111960468
subclass of: SO_0000673
so part of: LOC111960468
location: join(60399..60767,63819..63965,64232..64324)
location: region:60399-64324:1
so has part: feature:60399-60767:1:exon
so has part: feature:63819-63965:1:exon
so has part: feature:64232-64324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60399-60767:1:exon

position:60767:1
position: 60767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63819-63965:1:exon

position:63819:1
position: 63819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63965:1
position: 63965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64232-64324:1:exon

position:64232:1
position: 64232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960467
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 64940..76057
location: region:64940-76057:1
so has part: feature:64940-76057:1:exon
subclass of: SO_0000010

111960467
type: Gene
SIO_000068: ncbigene

position:64940:1
position: 64940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76057:1
position: 76057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64940-76057:1:exon

LOC111960467
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960467
product: arachidonate 12-lipoxygenase, 12S-type-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982480.1
SIO_010081: LOC111960467
subclass of: SO_0000673
so part of: LOC111960467
location: join(64940..65030,66865..66970,68191..68363,70496..70617,70765..70983,73223..73309,73572..73741,73908..74029,74316..74416,74634..74804,75842..76057)
location: region:64940-76057:1
so has part: feature:64940-65030:1:exon
so has part: feature:66865-66970:1:exon
so has part: feature:68191-68363:1:exon
so has part: feature:70496-70617:1:exon
so has part: feature:70765-70983:1:exon
so has part: feature:73223-73309:1:exon
so has part: feature:73572-73741:1:exon
so has part: feature:73908-74029:1:exon
so has part: feature:74316-74416:1:exon
so has part: feature:74634-74804:1:exon
so has part: feature:75842-76057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64940-65030:1:exon

position:65030:1
position: 65030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66865-66970:1:exon

position:66865:1
position: 66865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66970:1
position: 66970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:68191-68363:1:exon

position:68191:1
position: 68191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68363:1
position: 68363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:70496-70617:1:exon

position:70496:1
position: 70496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70617:1
position: 70617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:70765-70983:1:exon

position:70765:1
position: 70765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70983:1
position: 70983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:73223-73309:1:exon

position:73223:1
position: 73223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73309:1
position: 73309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:73572-73741:1:exon

position:73572:1
position: 73572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73741:1
position: 73741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:73908-74029:1:exon

position:73908:1
position: 73908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74029:1
position: 74029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:74316-74416:1:exon

position:74316:1
position: 74316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74416:1
position: 74416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:74634-74804:1:exon

position:74634:1
position: 74634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74804:1
position: 74804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:75842-76057:1:exon

position:75842:1
position: 75842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960467
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960467
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:70601..70603,aa:OTHER)
product: LOW QUALITY PROTEIN: arachidonate 12-lipoxygenase, 12S-type-like
translation: MFGKSWDNLDDFKRCFWKLRSPISEYCMEHWKEDSFFGYQCLNGSNPRMIQCCKKLPGNFPVSGDMVQGSLAPRTTLEKELKAGNIYLVDYAIMDGVPTNVIRGKPQYIAAPLCLLVXTPRPGPLLPQLGQTPGXGPPIFLPKNRPWXWLLAKIWVRHSEFQVFQLLSHLLKTHLVVEVFCVSTLRQLPAVHPVYKLLAPHLRYTLEINCRGRTQLLSADGIFKRVVSTGGEGLLILAQNEYKVLTYRSLQPYQDFQQRGASKLRNYFYREYSLMLWDAIHSFVSGMVSLYYHYDSDVVEDTELQAWIKDIAEEGFVDVPRFGLARELHNKTELITLLSVAIFTSSVQHAATNNGQFDWCAWVPNTPCTMRHPPPTDKDAVTMEMIMDTLPDVSQTCLEMAITWHLGRPQPDAIPLGQYREQYFTESQAQEVIDKFRQELKEIEEHILTQNEGLELPYLFLLPSRIENSITI
SIO_010081: LOC111960467
subclass of: SO_0000673
so part of: LOC111960467
location: join(66898..66970,68191..68363,70496..70617,70765..70983,73223..73309,73572..73741,73908..74029,74316..74416,74634..74804,75842..76021)
location: region:66898-76021:1
so has part: feature:66898-66970:1:exon
so has part: feature:68191-68363:1:exon
so has part: feature:70496-70617:1:exon
so has part: feature:70765-70983:1:exon
so has part: feature:73223-73309:1:exon
so has part: feature:73572-73741:1:exon
so has part: feature:73908-74029:1:exon
so has part: feature:74316-74416:1:exon
so has part: feature:74634-74804:1:exon
so has part: feature:75842-76021:1:exon

XP_023838248.1
type: Protein
SIO_000068: ncbiprotein

position:66898:1
position: 66898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76021:1
position: 76021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66898-66970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68191-68363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70496-70617:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70765-70983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73223-73309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:73572-73741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:73908-74029:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:74316-74416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74634-74804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75842-76021:1:exon

LOC111960225
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(79082..82332)
location: region:79082-82332:-1
so has part: feature:79082-82332:-1:exon
subclass of: SO_0000010

111960225
type: Gene
SIO_000068: ncbigene

position:79082:-1
position: 79082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82332:-1
position: 82332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79082-82332:-1:exon

LOC111960225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960225
product: ribonuclease kappa-A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023982122.1
SIO_010081: LOC111960225
subclass of: SO_0000673
so part of: LOC111960225
location: complement(join(79082..80770,81514..81596,82077..82332))
location: region:79082-82332:-1
so has part: feature:82077-82332:-1:exon
so has part: feature:81514-81596:-1:exon
so has part: feature:79082-80770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82077-82332:-1:exon

position:82077:-1
position: 82077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81514-81596:-1:exon

position:81514:-1
position: 81514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81596:-1
position: 81596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79082-80770:-1:exon

position:80770:-1
position: 80770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease kappa-A
translation: MVSCLFCGPKLAACGIVISIWGVIMLAMLGIFFTTHSAVLIDDVPFKEEDMHNDQEPPHTIYGLYNQVGYNCFIAAGIYVLVAALSFCQIKLNHRKEYMVR
SIO_010081: LOC111960225
subclass of: SO_0000673
so part of: LOC111960225
location: complement(join(80626..80770,81514..81596,82077..82154))
location: region:80626-82154:-1
so has part: feature:82077-82154:-1:exon
so has part: feature:81514-81596:-1:exon
so has part: feature:80626-80770:-1:exon

XP_023837890.1
type: Protein
SIO_000068: ncbiprotein

position:80626:-1
position: 80626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82154:-1
position: 82154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82077-82154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81514-81596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80626-80770:-1:exon

LOC111960224
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 82834..91550
location: region:82834-91550:1
so has part: feature:82834-91550:1:exon
subclass of: SO_0000010

111960224
type: Gene
SIO_000068: ncbigene

position:82834:1
position: 82834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91550:1
position: 91550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82834-91550:1:exon

LOC111960224
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960224
product: chromatin complexes subunit BAP18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_023982120.1
SIO_010081: LOC111960224
subclass of: SO_0000673
so part of: LOC111960224
location: join(82834..83464,84170..84264,85996..86219,86491..86589,90339..91055)
location: region:82834-91055:1
so has part: feature:82834-83464:1:exon
so has part: feature:84170-84264:1:exon
so has part: feature:85996-86219:1:exon
so has part: feature:86491-86589:1:exon
so has part: feature:90339-91055:1:exon

position:91055:1
position: 91055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82834-83464:1:exon

position:83464:1
position: 83464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84170-84264:1:exon

position:84170:1
position: 84170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84264:1
position: 84264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85996-86219:1:exon

position:85996:1
position: 85996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86219:1
position: 86219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:86491-86589:1:exon

position:86491:1
position: 86491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86589:1
position: 86589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90339-91055:1:exon

position:90339:1
position: 90339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960224
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960224
product: chromatin complexes subunit BAP18, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_023982121.1
SIO_010081: LOC111960224
subclass of: SO_0000673
so part of: LOC111960224
location: join(82845..83464,84170..84264,85996..86219,86494..86589,90339..91055)
location: region:82845-91055:1
so has part: feature:82845-83464:1:exon
so has part: feature:84170-84264:1:exon
so has part: feature:85996-86219:1:exon
so has part: feature:86494-86589:1:exon
so has part: feature:90339-91055:1:exon

position:82845:1
position: 82845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82845-83464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84170-84264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85996-86219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86494-86589:1:exon

position:86494:1
position: 86494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90339-91055:1:exon

LOC111960224
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960224
product: chromatin complexes subunit BAP18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023982117.1
SIO_010081: LOC111960224
subclass of: SO_0000673
so part of: LOC111960224
location: join(82848..83464,84170..84264,85350..85451,85996..86219,86491..86589,90339..91055)
location: region:82848-91055:1
so has part: feature:82848-83464:1:exon
so has part: feature:84170-84264:1:exon
so has part: feature:85350-85451:1:exon
so has part: feature:85996-86219:1:exon
so has part: feature:86491-86589:1:exon
so has part: feature:90339-91055:1:exon

position:82848:1
position: 82848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82848-83464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84170-84264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85350-85451:1:exon

position:85350:1
position: 85350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85451:1
position: 85451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85996-86219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86491-86589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90339-91055:1:exon

LOC111960224
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960224
product: chromatin complexes subunit BAP18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023982118.1
SIO_010081: LOC111960224
subclass of: SO_0000673
so part of: LOC111960224
location: join(82871..83464,84170..84264,85350..85451,85996..86219,86494..86589,90339..91550)
location: region:82871-91550:1
so has part: feature:82871-83464:1:exon
so has part: feature:84170-84264:1:exon
so has part: feature:85350-85451:1:exon
so has part: feature:85996-86219:1:exon
so has part: feature:86494-86589:1:exon
so has part: feature:90339-91550:1:exon

position:82871:1
position: 82871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82871-83464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84170-84264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85350-85451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85996-86219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86494-86589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90339-91550:1:exon

LOC111960224
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X1
translation: MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTDTEIEQLRSTVVRFGDDLNSLSSVIKERTVAQIKTTVKRKLYDESGMPISTDSPKKAVKKTAVTMATTATPTVIAVPTAQVVLPAGLQGNVTVAPPAMKKQKTSADVTLSALNDSDVNSDLEGLGEGSNSKKLNFDQDNLNLDSGLIMNSSDLPLLSR
SIO_010081: LOC111960224
subclass of: SO_0000673
so part of: LOC111960224
location: join(83444..83464,84170..84264,85350..85451,85996..86219,86491..86589,90339..90403)
location: region:83444-90403:1
so has part: feature:83444-83464:1:exon
so has part: feature:84170-84264:1:exon
so has part: feature:85350-85451:1:exon
so has part: feature:85996-86219:1:exon
so has part: feature:86491-86589:1:exon
so has part: feature:90339-90403:1:exon

XP_023837885.1
type: Protein
SIO_000068: ncbiprotein

position:83444:1
position: 83444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90403:1
position: 90403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83444-83464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84170-84264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85350-85451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85996-86219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86491-86589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90339-90403:1:exon

LOC111960224
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X2
translation: MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTDTEIEQLRSTVVRFGDDLNSLSSVIKERTVAQIKTTVKRKLYDESGMPISTDSPKKAVKKTAVTMATTATPTVIAVPTAQVVLPAGLQGNVTVAPPAMKKQKTSDVTLSALNDSDVNSDLEGLGEGSNSKKLNFDQDNLNLDSGLIMNSSDLPLLSR
SIO_010081: LOC111960224
subclass of: SO_0000673
so part of: LOC111960224
location: join(83444..83464,84170..84264,85350..85451,85996..86219,86494..86589,90339..90403)
location: region:83444-90403:1
so has part: feature:83444-83464:1:exon
so has part: feature:84170-84264:1:exon
so has part: feature:85350-85451:1:exon
so has part: feature:85996-86219:1:exon
so has part: feature:86494-86589:1:exon
so has part: feature:90339-90403:1:exon

XP_023837886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83444-83464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84170-84264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85350-85451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85996-86219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86494-86589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90339-90403:1:exon

LOC111960224
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X3
translation: MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAQIKTTVKRKLYDESGMPISTDSPKKAVKKTAVTMATTATPTVIAVPTAQVVLPAGLQGNVTVAPPAMKKQKTSADVTLSALNDSDVNSDLEGLGEGSNSKKLNFDQDNLNLDSGLIMNSSDLPLLSR
SIO_010081: LOC111960224
subclass of: SO_0000673
so part of: LOC111960224
location: join(83444..83464,84170..84264,85996..86219,86491..86589,90339..90403)
location: region:83444-90403:1
so has part: feature:83444-83464:1:exon
so has part: feature:84170-84264:1:exon
so has part: feature:85996-86219:1:exon
so has part: feature:86491-86589:1:exon
so has part: feature:90339-90403:1:exon

XP_023837888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83444-83464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84170-84264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85996-86219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86491-86589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90339-90403:1:exon

LOC111960224
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X4
translation: MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAQIKTTVKRKLYDESGMPISTDSPKKAVKKTAVTMATTATPTVIAVPTAQVVLPAGLQGNVTVAPPAMKKQKTSDVTLSALNDSDVNSDLEGLGEGSNSKKLNFDQDNLNLDSGLIMNSSDLPLLSR
SIO_010081: LOC111960224
subclass of: SO_0000673
so part of: LOC111960224
location: join(83444..83464,84170..84264,85996..86219,86494..86589,90339..90403)
location: region:83444-90403:1
so has part: feature:83444-83464:1:exon
so has part: feature:84170-84264:1:exon
so has part: feature:85996-86219:1:exon
so has part: feature:86494-86589:1:exon
so has part: feature:90339-90403:1:exon

XP_023837889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83444-83464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84170-84264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85996-86219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86494-86589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90339-90403:1:exon

LOC111960349
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960349
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(109986..>111168)
location: region:109986-111168:-1
so has part: feature:109986-111168:-1:exon
subclass of: SO_0000010

111960349
type: Gene
SIO_000068: ncbigene

position:109986:-1
position: 109986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111168:-1
position: 111168
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109986-111168:-1:exon

LOC111960349
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960349
product: schwannomin-interacting protein 1
inference: similar to RNA sequence (same species):INSD:GGAP01016577.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 229 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_023982321.1
SIO_010081: LOC111960349
subclass of: SO_0000673
so part of: LOC111960349
location: complement(join(109986..110802,111051..>111168))
location: region:109986-111168:-1
so has part: feature:111051-111168:-1:exon
so has part: feature:109986-110802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111051-111168:-1:exon

position:111051:-1
position: 111051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109986-110802:-1:exon

position:110802:-1
position: 110802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960349
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960349
inference: similar to RNA sequence (same species):INSD:GGAP01016577.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 147 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: schwannomin-interacting protein 1
translation: MAVKNGSNGSSVQVSQQPQSLAATKSKSSGFKAALSALKNKLRTEQKRKSVACGDPLLKNRKRDHNDLQATSLKELNTHRNSLNKAIQDLSTELVVHLQARDQLRMEQDAMLLEVQDMTSL
SIO_010081: LOC111960349
subclass of: SO_0000673
so part of: LOC111960349
location: complement(join(110702..110802,111051..>111168))
location: region:110702-111168:-1
so has part: feature:111051-111168:-1:exon
so has part: feature:110702-110802:-1:exon

XP_023838089.1
type: Protein
SIO_000068: ncbiprotein

position:110702:-1
position: 110702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111051-111168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110702-110802:-1:exon

LOC111959998
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140645..144578)
location: region:140645-144578:-1
so has part: feature:140645-144578:-1:exon
subclass of: SO_0000011

111959998
type: Gene
SIO_000068: ncbigene

position:140645:-1
position: 140645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144578:-1
position: 144578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140645-144578:-1:exon

LOC111959998
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111959998
product: uncharacterized LOC111959998
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_002876750.1
SIO_010081: LOC111959998
subclass of: SO_0000673
so part of: LOC111959998
location: complement(join(140645..140867,143889..144071,144430..144578))
location: region:140645-144578:-1
so has part: feature:144430-144578:-1:exon
so has part: feature:143889-144071:-1:exon
so has part: feature:140645-140867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144430-144578:-1:exon

position:144430:-1
position: 144430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143889-144071:-1:exon

position:143889:-1
position: 143889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144071:-1
position: 144071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140645-140867:-1:exon

position:140867:-1
position: 140867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trnas-uga
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: trnas-uga
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(215886..215967)
location: region:215886-215967:-1
so has part: feature:215886-215967:-1:exon
subclass of: SO_0000663

111960476
type: Gene
SIO_000068: ncbigene

position:215886:-1
position: 215886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215967:-1
position: 215967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215886-215967:-1:exon

trnas-uga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8036
gene: trnas-uga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(215932..215934),aa:Ser,seq:tga)
SIO_010081: trnas-uga
subclass of: SO_0000673
so part of: trnas-uga
location: complement(215886..215967)
location: region:215886-215967:-1
so has part: feature:215886-215967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215886-215967:-1:exon

LOC111960135
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 216365..225997
location: region:216365-225997:1
so has part: feature:216365-225997:1:exon
subclass of: SO_0000010

111960135
type: Gene
SIO_000068: ncbigene

position:216365:1
position: 216365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225997:1
position: 225997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216365-225997:1:exon

LOC111960135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960135
product: transmembrane 4 L6 family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023982039.1
SIO_010081: LOC111960135
subclass of: SO_0000673
so part of: LOC111960135
location: join(216365..216423,222863..223263,224210..224274,225059..225210,225379..225565,225670..225997)
location: region:216365-225997:1
so has part: feature:216365-216423:1:exon
so has part: feature:222863-223263:1:exon
so has part: feature:224210-224274:1:exon
so has part: feature:225059-225210:1:exon
so has part: feature:225379-225565:1:exon
so has part: feature:225670-225997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:216365-216423:1:exon

position:216423:1
position: 216423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:222863-223263:1:exon

position:222863:1
position: 222863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223263:1
position: 223263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:224210-224274:1:exon

position:224210:1
position: 224210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224274:1
position: 224274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225059-225210:1:exon

position:225059:1
position: 225059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225210:1
position: 225210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:225379-225565:1:exon

position:225379:1
position: 225379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225565:1
position: 225565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:225670-225997:1:exon

position:225670:1
position: 225670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 5
translation: MCTGKCSKAIAIPLYVLAGVSIICNIIAFFPGWSTEYAQEDRDGKGDRITDEVKYMGGFIGGGLMVMPIPAIHIHLTSSNGCCANRCGMFLSIGFAAAGVVGALYSLATAALVLANGPVCLFKVTGDKDASWGRPFMNNSGSYLGDSELWKTCLKPDDVVEFNIGLFATLLVAASVELVLCAIQMVNGLFGCICGTCGGKEEA
SIO_010081: LOC111960135
subclass of: SO_0000673
so part of: LOC111960135
location: join(223065..223263,224210..224274,225059..225210,225379..225565,225670..225678)
location: region:223065-225678:1
so has part: feature:223065-223263:1:exon
so has part: feature:224210-224274:1:exon
so has part: feature:225059-225210:1:exon
so has part: feature:225379-225565:1:exon
so has part: feature:225670-225678:1:exon

XP_023837807.1
type: Protein
SIO_000068: ncbiprotein

position:223065:1
position: 223065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225678:1
position: 225678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223065-223263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224210-224274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225059-225210:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225379-225565:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:225670-225678:1:exon

trnaw-cca
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: trnaw-cca
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(231036..231107)
location: region:231036-231107:-1
so has part: feature:231036-231107:-1:exon
subclass of: SO_0000663

111960478
type: Gene
SIO_000068: ncbigene

position:231036:-1
position: 231036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231107:-1
position: 231107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231036-231107:-1:exon

trnaw-cca
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8036
gene: trnaw-cca
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(231073..231075),aa:Trp,seq:cca)
SIO_010081: trnaw-cca
subclass of: SO_0000673
so part of: trnaw-cca
location: complement(231036..231107)
location: region:231036-231107:-1
so has part: feature:231036-231107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231036-231107:-1:exon

LOC111960064
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960064
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 231700..239969
location: region:231700-239969:1
so has part: feature:231700-239969:1:exon

111960064
type: Gene
SIO_000068: ncbigene

position:231700:1
position: 231700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239969:1
position: 239969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231700-239969:1:exon

LOC111960064
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960064
subclass of: SO_0000673
so part of: LOC111960064
location: 231700..231869
location: region:231700-231869:1
so has part: feature:231700-231869:1:exon

position:231869:1
position: 231869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231700-231869:1:exon

LOC111960064
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960064
subclass of: SO_0000673
so part of: LOC111960064
location: 234689..234814
location: region:234689-234814:1
so has part: feature:234689-234814:1:exon

position:234689:1
position: 234689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234814:1
position: 234814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234689-234814:1:exon

LOC111960064
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960064
subclass of: SO_0000673
so part of: LOC111960064
location: 235052..235242
location: region:235052-235242:1
so has part: feature:235052-235242:1:exon

position:235052:1
position: 235052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235242:1
position: 235242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235052-235242:1:exon

LOC111960064
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960064
subclass of: SO_0000673
so part of: LOC111960064
location: 236647..236838
location: region:236647-236838:1
so has part: feature:236647-236838:1:exon

position:236647:1
position: 236647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236838:1
position: 236838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236647-236838:1:exon

LOC111960064
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960064
subclass of: SO_0000673
so part of: LOC111960064
location: 238906..239969
location: region:238906-239969:1
so has part: feature:238906-239969:1:exon

position:238906:1
position: 238906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238906-239969:1:exon

LOC111960060
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 246327..250600
location: region:246327-250600:1
so has part: feature:246327-250600:1:exon
subclass of: SO_0000010

111960060
type: Gene
SIO_000068: ncbigene

position:246327:1
position: 246327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250600:1
position: 250600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246327-250600:1:exon

LOC111960060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960060
product: transcription cofactor HES-6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_023981969.1
SIO_010081: LOC111960060
subclass of: SO_0000673
so part of: LOC111960060
location: join(246327..246964,247435..247554,247669..247741,249174..250600)
location: region:246327-250600:1
so has part: feature:246327-246964:1:exon
so has part: feature:247435-247554:1:exon
so has part: feature:247669-247741:1:exon
so has part: feature:249174-250600:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246327-246964:1:exon

position:246964:1
position: 246964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247435-247554:1:exon

position:247435:1
position: 247435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247554:1
position: 247554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247669-247741:1:exon

position:247669:1
position: 247669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247741:1
position: 247741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249174-250600:1:exon

position:249174:1
position: 249174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960060
product: transcription cofactor HES-6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_023981968.1
SIO_010081: LOC111960060
subclass of: SO_0000673
so part of: LOC111960060
location: join(246328..246964,247459..247554,247669..247741,249174..250600)
location: region:246328-250600:1
so has part: feature:246328-246964:1:exon
so has part: feature:247459-247554:1:exon
so has part: feature:247669-247741:1:exon
so has part: feature:249174-250600:1:exon

position:246328:1
position: 246328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246328-246964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247459-247554:1:exon

position:247459:1
position: 247459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247669-247741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249174-250600:1:exon

LOC111960060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor HES-6-like isoform X1
translation: MTASNMEHGGNAPEKNFNAKDERKLRKPLIEKRRRERINCSLEQLKGIMVDAYNLDQSKLEKADVLEVTVQHMEGLQKGHGPGIPAGPSVGFQSRQRYSSGYIQCMQEVHNLLLGCPGMDKPLGAQLLNHLLKSLPHISSETGPGNTGGNGPNRTPTRPITGGVNGTKGVNRTLIRAIGNCNGSIGCGGSSNGASPNSGPGSPPQSPLSLPSGGVGLFRPRRLQMHHASPPLTTPTRCPPLHAPHRRVHSGRDGREQLPASSPSSPPNLPQPGVFHPAPLPPFFGPVGDPSMWRPW
SIO_010081: LOC111960060
subclass of: SO_0000673
so part of: LOC111960060
location: join(246893..246964,247459..247554,247669..247741,249174..249823)
location: region:246893-249823:1
so has part: feature:246893-246964:1:exon
so has part: feature:247459-247554:1:exon
so has part: feature:247669-247741:1:exon
so has part: feature:249174-249823:1:exon

XP_023837736.1
type: Protein
SIO_000068: ncbiprotein

position:246893:1
position: 246893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249823:1
position: 249823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246893-246964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247459-247554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247669-247741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249174-249823:1:exon

LOC111960060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HES-4-like isoform X2
translation: MVDAYNLDQSKLEKADVLEVTVQHMEGLQKGHGPGIPAGPSVGFQSRQRYSSGYIQCMQEVHNLLLGCPGMDKPLGAQLLNHLLKSLPHISSETGPGNTGGNGPNRTPTRPITGGVNGTKGVNRTLIRAIGNCNGSIGCGGSSNGASPNSGPGSPPQSPLSLPSGGVGLFRPRRLQMHHASPPLTTPTRCPPLHAPHRRVHSGRDGREQLPASSPSSPPNLPQPGVFHPAPLPPFFGPVGDPSMWRPW
SIO_010081: LOC111960060
subclass of: SO_0000673
so part of: LOC111960060
location: join(247531..247554,247669..247741,249174..249823)
location: region:247531-249823:1
so has part: feature:247531-247554:1:exon
so has part: feature:247669-247741:1:exon
so has part: feature:249174-249823:1:exon

XP_023837737.1
type: Protein
SIO_000068: ncbiprotein

position:247531:1
position: 247531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247531-247554:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247669-247741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249174-249823:1:exon

trnal-aag
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: trnal-aag
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 250749..250830
location: region:250749-250830:1
so has part: feature:250749-250830:1:exon
subclass of: SO_0000663

111960475
type: Gene
SIO_000068: ncbigene

position:250749:1
position: 250749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250830:1
position: 250830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250749-250830:1:exon

trnal-aag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8036
gene: trnal-aag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:250783..250785,aa:Leu,seq:aag)
SIO_010081: trnal-aag
subclass of: SO_0000673
so part of: trnal-aag
location: 250749..250830
location: region:250749-250830:1
so has part: feature:250749-250830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250749-250830:1:exon

gal3st4
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: gal3st4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 322491..335715
location: region:322491-335715:1
so has part: feature:322491-335715:1:exon
subclass of: SO_0000010

111959995
type: Gene
SIO_000068: ncbigene

position:322491:1
position: 322491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335715:1
position: 335715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322491-335715:1:exon

gal3st4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: gal3st4
product: galactose-3-O-sulfotransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_023981833.1
SIO_010081: gal3st4
subclass of: SO_0000673
so part of: gal3st4
location: join(322491..322904,324565..324684,326574..326724,326842..326988,333147..333267,334085..335715)
location: region:322491-335715:1
so has part: feature:322491-322904:1:exon
so has part: feature:324565-324684:1:exon
so has part: feature:326574-326724:1:exon
so has part: feature:326842-326988:1:exon
so has part: feature:333147-333267:1:exon
so has part: feature:334085-335715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322491-322904:1:exon

position:322904:1
position: 322904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324565-324684:1:exon

position:324565:1
position: 324565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324684:1
position: 324684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:326574-326724:1:exon

position:326574:1
position: 326574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326724:1
position: 326724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326842-326988:1:exon

position:326842:1
position: 326842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326988:1
position: 326988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333147-333267:1:exon

position:333147:1
position: 333147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333267:1
position: 333267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:334085-335715:1:exon

position:334085:1
position: 334085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gal3st4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: gal3st4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactose-3-O-sulfotransferase 4
translation: MVFKRRARRMRLGLRCYRVGPTWLWKALLVFVAIAFAGQLLGVIYNKSLQQDRLRWLFSSDGQGPSLGSCRPRSHVMFLKTHKTASSTVLNILYRYGEEKDLRFALPLGYQFDYPLPFNAHRVKGYRGPRVAEFSIMGNHMRFNKPEVGKVMPADTFYFSILRDPVALTESSYAYYKSVAPAFRKAKGLGDFADNPWKYYDPRLHNNHYARNLLWFDFGLDHNANFSTALAQRGEVAIRRAFKLILVSEHFDESMVLLRHALCWPLDAVVSFSLNARQQKSSGSSSWVDKAAAAQPPAKALTDNQRQKLREWNALDWHLYQAFNRYFWDEVDRFGRARMDQEVVLLRTRRELLAKACLREGGKPVEASRIRDRNIRPFQSGLVKILGYELQPGLDNATRQACLRMIRPEIQYKDLLDARQFPRAAPQPAQAPPPAIPAGGAYVRKGPSFQLRTGELGVEGGRRMGEEERDWDGSRLSRSNNNNQTLARDRGGRRGKRNIR
SIO_010081: gal3st4
subclass of: SO_0000673
so part of: gal3st4
location: join(322882..322904,324565..324684,326574..326724,326842..326988,333147..333267,334085..335025)
location: region:322882-335025:1
so has part: feature:322882-322904:1:exon
so has part: feature:324565-324684:1:exon
so has part: feature:326574-326724:1:exon
so has part: feature:326842-326988:1:exon
so has part: feature:333147-333267:1:exon
so has part: feature:334085-335025:1:exon

XP_023837601.1
type: Protein
SIO_000068: ncbiprotein

position:322882:1
position: 322882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335025:1
position: 335025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322882-322904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324565-324684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326574-326724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326842-326988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333147-333267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334085-335025:1:exon

LOC111960433
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344742..357497
location: region:344742-357497:1
so has part: feature:344742-357497:1:exon
subclass of: SO_0000010

111960433
type: Gene
SIO_000068: ncbigene

position:344742:1
position: 344742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357497:1
position: 357497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344742-357497:1:exon

LOC111960433
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960433
product: uncharacterized protein C7orf43 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_023982423.1
SIO_010081: LOC111960433
subclass of: SO_0000673
so part of: LOC111960433
location: join(344742..344778,348855..348975,349212..349359,353261..353322,355146..355318,355644..355780,355940..356139,356652..357497)
location: region:344742-357497:1
so has part: feature:344742-344778:1:exon
so has part: feature:348855-348975:1:exon
so has part: feature:349212-349359:1:exon
so has part: feature:353261-353322:1:exon
so has part: feature:355146-355318:1:exon
so has part: feature:355644-355780:1:exon
so has part: feature:355940-356139:1:exon
so has part: feature:356652-357497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344742-344778:1:exon

position:344778:1
position: 344778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348855-348975:1:exon

position:348855:1
position: 348855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348975:1
position: 348975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:349212-349359:1:exon

position:349212:1
position: 349212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349359:1
position: 349359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:353261-353322:1:exon

position:353261:1
position: 353261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353322:1
position: 353322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:355146-355318:1:exon

position:355146:1
position: 355146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355318:1
position: 355318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:355644-355780:1:exon

position:355644:1
position: 355644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355780:1
position: 355780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:355940-356139:1:exon

position:355940:1
position: 355940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356139:1
position: 356139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:356652-357497:1:exon

position:356652:1
position: 356652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960433
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C7orf43 homolog
translation: MMPDGSVLLVDNVCHQSAEVTMASFHRMNSSSSHLPSMLSALEEQNFLFQLQLRDQPEEESSEGLEVPLVAVLQWSTSKLPFTRYISTHYQLPSVRLDRPRLVMTASCQSAVRPQEHFRVKYTLLNNLQDFLAVRLVWTPEGRGRQEDPSASSVVCHSPLNNLGQCRKGSTLSFTVAFQILKAGLFELSQHMKLKLQFTASCSNPPAEARAMSLSLSRNNSPSSPAVRDLLDRQSLGRSQSFSHQQPSRSHLMRTGSVMERRAITPPVGSPVGRPLYLPPERPVLSLDKIAKRECKVLVLELGRDWESEGGRVGGMR
SIO_010081: LOC111960433
subclass of: SO_0000673
so part of: LOC111960433
location: join(348935..348975,349212..349359,353261..353322,355146..355318,355644..355780,355940..356139,356652..356844)
location: region:348935-356844:1
so has part: feature:348935-348975:1:exon
so has part: feature:349212-349359:1:exon
so has part: feature:353261-353322:1:exon
so has part: feature:355146-355318:1:exon
so has part: feature:355644-355780:1:exon
so has part: feature:355940-356139:1:exon
so has part: feature:356652-356844:1:exon

XP_023838191.1
type: Protein
SIO_000068: ncbiprotein

position:348935:1
position: 348935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356844:1
position: 356844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348935-348975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349212-349359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353261-353322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355146-355318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355644-355780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355940-356139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356652-356844:1:exon

mblac1
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: mblac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 369657..370846
location: region:369657-370846:1
so has part: feature:369657-370846:1:exon
subclass of: SO_0000010

111960325
type: Gene
SIO_000068: ncbigene

position:369657:1
position: 369657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370846:1
position: 370846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369657-370846:1:exon

mblac1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: mblac1
product: metallo-beta-lactamase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_023982291.1
SIO_010081: mblac1
subclass of: SO_0000673
so part of: mblac1
location: join(369657..370199,370409..370846)
location: region:369657-370846:1
so has part: feature:369657-370199:1:exon
so has part: feature:370409-370846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369657-370199:1:exon

position:370199:1
position: 370199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370409-370846:1:exon

position:370409:1
position: 370409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mblac1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: mblac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metallo-beta-lactamase domain-containing protein 1
translation: MEATEKKNACNSSEFRRSELSDTELEIVGQPYSISVLKVGYCLAEQDGSFRADGTISLLTGPRTILVDTGGPWDRDFLVKRLKDKRLDPGDISLVVGTHGHSDHVGNLGLFPGATIVVGCDISEGDRYLPNQLAEGQPYPIDEHVSIVPTPGHTGHDVSLLVKGTTMGTVLVAGDLFERCTDDDSWRELSENPAVQEASRQEALRTSDVIIPGHGLPFRVHREEADGRSG
SIO_010081: mblac1
subclass of: SO_0000673
so part of: mblac1
location: join(369768..370199,370409..370669)
location: region:369768-370669:1
so has part: feature:369768-370199:1:exon
so has part: feature:370409-370669:1:exon

XP_023838059.1
type: Protein
SIO_000068: ncbiprotein

position:369768:1
position: 369768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370669:1
position: 370669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369768-370199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370409-370669:1:exon

LOC111960065
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 403456..406721
location: region:403456-406721:1
so has part: feature:403456-406721:1:exon
subclass of: SO_0000011

111960065
type: Gene
SIO_000068: ncbigene

position:403456:1
position: 403456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406721:1
position: 406721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403456-406721:1:exon

LOC111960065
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960065
product: uncharacterized LOC111960065
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002876761.1
SIO_010081: LOC111960065
subclass of: SO_0000673
so part of: LOC111960065
location: join(403456..403521,403670..403860,404241..404367,405995..406238,406579..406721)
location: region:403456-406721:1
so has part: feature:403456-403521:1:exon
so has part: feature:403670-403860:1:exon
so has part: feature:404241-404367:1:exon
so has part: feature:405995-406238:1:exon
so has part: feature:406579-406721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:403456-403521:1:exon

position:403521:1
position: 403521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403670-403860:1:exon

position:403670:1
position: 403670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403860:1
position: 403860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:404241-404367:1:exon

position:404241:1
position: 404241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404367:1
position: 404367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405995-406238:1:exon

position:405995:1
position: 405995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406238:1
position: 406238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406579-406721:1:exon

position:406579:1
position: 406579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960119
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 408936..431051
location: region:408936-431051:1
so has part: feature:408936-431051:1:exon
subclass of: SO_0000010

111960119
type: Gene
SIO_000068: ncbigene

position:408936:1
position: 408936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431051:1
position: 431051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408936-431051:1:exon

LOC111960119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960119
product: zonadhesin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982024.1
SIO_010081: LOC111960119
subclass of: SO_0000673
so part of: LOC111960119
location: join(408936..409133,409263..409401,409978..410094,410644..410768,411500..411645,412041..412184,413147..413254,414377..414546,415796..415998,416287..416428,416835..417082,417349..417526,417705..417813,418069..418163,420064..420240,420996..421198,421437..421581,421769..421866,422046..422189,424289..424453,426598..426725,427505..427776,428816..428989,430915..431051)
location: region:408936-431051:1
so has part: feature:408936-409133:1:exon
so has part: feature:409263-409401:1:exon
so has part: feature:409978-410094:1:exon
so has part: feature:410644-410768:1:exon
so has part: feature:411500-411645:1:exon
so has part: feature:412041-412184:1:exon
so has part: feature:413147-413254:1:exon
so has part: feature:414377-414546:1:exon
so has part: feature:415796-415998:1:exon
so has part: feature:416287-416428:1:exon
so has part: feature:416835-417082:1:exon
so has part: feature:417349-417526:1:exon
so has part: feature:417705-417813:1:exon
so has part: feature:418069-418163:1:exon
so has part: feature:420064-420240:1:exon
so has part: feature:420996-421198:1:exon
so has part: feature:421437-421581:1:exon
so has part: feature:421769-421866:1:exon
so has part: feature:422046-422189:1:exon
so has part: feature:424289-424453:1:exon
so has part: feature:426598-426725:1:exon
so has part: feature:427505-427776:1:exon
so has part: feature:428816-428989:1:exon
so has part: feature:430915-431051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408936-409133:1:exon

position:409133:1
position: 409133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:409263-409401:1:exon

position:409263:1
position: 409263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409401:1
position: 409401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:409978-410094:1:exon

position:409978:1
position: 409978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410094:1
position: 410094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:410644-410768:1:exon

position:410644:1
position: 410644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410768:1
position: 410768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:411500-411645:1:exon

position:411500:1
position: 411500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411645:1
position: 411645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:412041-412184:1:exon

position:412041:1
position: 412041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412184:1
position: 412184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:413147-413254:1:exon

position:413147:1
position: 413147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413254:1
position: 413254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:414377-414546:1:exon

position:414377:1
position: 414377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414546:1
position: 414546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:415796-415998:1:exon

position:415796:1
position: 415796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415998:1
position: 415998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:416287-416428:1:exon

position:416287:1
position: 416287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416428:1
position: 416428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:416835-417082:1:exon

position:416835:1
position: 416835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417082:1
position: 417082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:417349-417526:1:exon

position:417349:1
position: 417349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417526:1
position: 417526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:417705-417813:1:exon

position:417705:1
position: 417705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417813:1
position: 417813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:418069-418163:1:exon

position:418069:1
position: 418069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418163:1
position: 418163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:420064-420240:1:exon

position:420064:1
position: 420064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420240:1
position: 420240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:420996-421198:1:exon

position:420996:1
position: 420996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421198:1
position: 421198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:421437-421581:1:exon

position:421437:1
position: 421437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421581:1
position: 421581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:421769-421866:1:exon

position:421769:1
position: 421769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421866:1
position: 421866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:422046-422189:1:exon

position:422046:1
position: 422046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422189:1
position: 422189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:424289-424453:1:exon

position:424289:1
position: 424289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424453:1
position: 424453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:426598-426725:1:exon

position:426598:1
position: 426598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426725:1
position: 426725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:427505-427776:1:exon

position:427505:1
position: 427505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427776:1
position: 427776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:428816-428989:1:exon

position:428816:1
position: 428816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428989:1
position: 428989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:430915-431051:1:exon

position:430915:1
position: 430915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zonadhesin-like
translation: MHECKVQGGELDCYPTSSQDCVISGDPHYNTFDDRFYSFMGTCTYTLARTCKNNTGPWFSVEGKNEERGLAGVSYLKKLYVTVDGITVTLMKSRKTLVNGKRVSLPHSPSLLISLSLAGQYVTLQTPFGLKVRWDGNHYAQISVPSSYSDQMCGLCGDYDGNPNNDFTKPDGSQVTSSKDFGNSWKTEEDEDVTCKPDTNPDPHCDPSQEAEVSKPENCGKLTDTKGPFRECIALVDPSPFFQSCVYDMCRFVGQQQMLCDQLQVYTDACLSAGIKVHPWREPDFCPLACPPNSSYSMCVSSCPETCLGVSGPPGCSEVCVEGCECDLGFILSDDKCVPVKDCGCVNSSGDYHPVGDAWYLEGCKEKCVCLGGGVLQCHNTTCTPAESCGLQDGELGCYPLETGICTVQGDPHYTSFDKKVHNFMGSCSYTLTKPCNESAGLPYFTVDTQNEHRGSNKKVSYVRAVMVKVYGMTIILGKGRKIQVNGTLVTPPVTLTNGVKVYLSGKFVVLETTFGLRVRFDGNHHADVTLPSFYNGLLCGLCGNFNDQPGDDNIKPDGKPAVNTNELGESWQVPDDRPDCTHGGGEEECDPKVEAEAVKPTSCGMISDPNGIFKPCHAVVPPNIYQENCVYDQCATGGETVALCQAIESYADLCALAGVPIAWRNNTFCPLKCLPGSHYEPCGSACPSSCQNPTFNSTCNQPCVEGCVCDLGLLLSGDKCVPPSQCGCTDEDNNYRPVGDSWFTELDCSERCRCNPGNNMTCEPWQCSPAQECKVLEGELGCVSTGLGVCHVSGDPHYYTFDAVMHTFMGTCTYTLVEVCNSTKVTPFTIVAKNEERGQPEASYVHSVTVYLPNANVTLQKSRRVLLNGHRVRTPLSIDVAGARVLSSGVYILLDTNFGLKVKFDGVHHLEITVPGEYFNKVCGMCGNFNMNTSDDNLKPDGKPAKDVIELGNSWKSEGDSDPGCSPDERPSIHPNCTTGEENQYETLCSSVVLGDKFKPCHSLLSPEAFLGNCVYDMCEYDGMQATLCDNVEAYAQACQSAGVTISWRNNTFCRGSSWSLEALAVPASKGPPDAPSLYLPRPWPSPPALNLFPRSATALNHLRRGGVSVNAESRRQGVISIGDPTNPYVDGGSPTLPGPHPILTAGSRPPQLLVEI
SIO_010081: LOC111960119
subclass of: SO_0000673
so part of: LOC111960119
location: join(409353..409401,409978..410094,410644..410768,411500..411645,412041..412184,413147..413254,414377..414546,415796..415998,416287..416428,416835..417082,417349..417526,417705..417813,418069..418163,420064..420240,420996..421198,421437..421581,421769..421866,422046..422189,424289..424453,426598..426725,427505..427776,428816..428989,430915..431051)
location: region:409353-431051:1
so has part: feature:409353-409401:1:exon
so has part: feature:409978-410094:1:exon
so has part: feature:410644-410768:1:exon
so has part: feature:411500-411645:1:exon
so has part: feature:412041-412184:1:exon
so has part: feature:413147-413254:1:exon
so has part: feature:414377-414546:1:exon
so has part: feature:415796-415998:1:exon
so has part: feature:416287-416428:1:exon
so has part: feature:416835-417082:1:exon
so has part: feature:417349-417526:1:exon
so has part: feature:417705-417813:1:exon
so has part: feature:418069-418163:1:exon
so has part: feature:420064-420240:1:exon
so has part: feature:420996-421198:1:exon
so has part: feature:421437-421581:1:exon
so has part: feature:421769-421866:1:exon
so has part: feature:422046-422189:1:exon
so has part: feature:424289-424453:1:exon
so has part: feature:426598-426725:1:exon
so has part: feature:427505-427776:1:exon
so has part: feature:428816-428989:1:exon
so has part: feature:430915-431051:1:exon

XP_023837792.1
type: Protein
SIO_000068: ncbiprotein

position:409353:1
position: 409353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409353-409401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409978-410094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410644-410768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411500-411645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412041-412184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:413147-413254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414377-414546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:415796-415998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416287-416428:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416835-417082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:417349-417526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:417705-417813:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:418069-418163:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:420064-420240:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:420996-421198:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:421437-421581:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:421769-421866:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:422046-422189:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424289-424453:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:426598-426725:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:427505-427776:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:428816-428989:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:430915-431051:1:exon

LOC111960120
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 431111..433252
location: region:431111-433252:1
so has part: feature:431111-433252:1:exon
subclass of: SO_0000010

111960120
type: Gene
SIO_000068: ncbigene

position:431111:1
position: 431111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433252:1
position: 433252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431111-433252:1:exon

LOC111960120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960120
product: zonadhesin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023982025.1
SIO_010081: LOC111960120
subclass of: SO_0000673
so part of: LOC111960120
location: join(431111..431170,432271..432400,432505..432706,433087..433252)
location: region:431111-433252:1
so has part: feature:431111-431170:1:exon
so has part: feature:432271-432400:1:exon
so has part: feature:432505-432706:1:exon
so has part: feature:433087-433252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431111-431170:1:exon

position:431170:1
position: 431170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:432271-432400:1:exon

position:432271:1
position: 432271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432400:1
position: 432400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432505-432706:1:exon

position:432505:1
position: 432505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432706:1
position: 432706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:433087-433252:1:exon

position:433087:1
position: 433087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zonadhesin-like
translation: MRCNVDVTGQTTSCRRKVVLVNGERVAPPLSPRGGLTITRNSKNVQLVADFGMTVRFDGKQHGEVILPSTYRDRVRGLCGNYDGVSRNEYMKPDGTVTRNLEEFGNSWRVTDRQGAELVTSELPKMVHLHRRDVETDPETGFETAGCTDAQLADFNGIKQCGAISDPTGPFAACHAPLLPNSFQE
SIO_010081: LOC111960120
subclass of: SO_0000673
so part of: LOC111960120
location: join(431111..431170,432271..432400,432505..432706,433087..433252)
location: region:431111-433252:1
so has part: feature:431111-431170:1:exon
so has part: feature:432271-432400:1:exon
so has part: feature:432505-432706:1:exon
so has part: feature:433087-433252:1:exon

XP_023837793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431111-431170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432271-432400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432505-432706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433087-433252:1:exon

LOC111960122
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 433943..436319
location: region:433943-436319:1
so has part: feature:433943-436319:1:exon
subclass of: SO_0000010

111960122
type: Gene
SIO_000068: ncbigene

position:433943:1
position: 433943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436319:1
position: 436319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433943-436319:1:exon

LOC111960122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960122
product: zonadhesin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_023982027.1
SIO_010081: LOC111960122
subclass of: SO_0000673
so part of: LOC111960122
location: join(433943..434047,434500..434702,435827..435962,436171..436319)
location: region:433943-436319:1
so has part: feature:433943-434047:1:exon
so has part: feature:434500-434702:1:exon
so has part: feature:435827-435962:1:exon
so has part: feature:436171-436319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433943-434047:1:exon

position:434047:1
position: 434047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434500-434702:1:exon

position:434500:1
position: 434500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434702:1
position: 434702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435827-435962:1:exon

position:435827:1
position: 435827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435962:1
position: 435962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436171-436319:1:exon

position:436171:1
position: 436171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zonadhesin-like
translation: MTPCPASCADLAAPSECDFTACVEGCQCSPGFTMSGGICVPYSECGCSYLDRYYPLKEKFVTEDCGLSCESTPSGAVCQPKGCSDTHVCTIFNLTRDCYKKSPCLSDPCLNNGACAEITVDLFSCQCLEGFEGSLCEIEKTDTSGGLGT
SIO_010081: LOC111960122
subclass of: SO_0000673
so part of: LOC111960122
location: join(434538..434702,435827..435962,436171..436319)
location: region:434538-436319:1
so has part: feature:434538-434702:1:exon
so has part: feature:435827-435962:1:exon
so has part: feature:436171-436319:1:exon

XP_023837795.1
type: Protein
SIO_000068: ncbiprotein

position:434538:1
position: 434538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434538-434702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435827-435962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436171-436319:1:exon

LOC111960376
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 438994..442658
location: region:438994-442658:1
so has part: feature:438994-442658:1:exon
subclass of: SO_0000011

111960376
type: Gene
SIO_000068: ncbigene

position:438994:1
position: 438994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442658:1
position: 442658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438994-442658:1:exon

LOC111960376
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960376
product: uncharacterized LOC111960376
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_002876828.1
SIO_010081: LOC111960376
subclass of: SO_0000673
so part of: LOC111960376
location: join(438994..439056,442060..442658)
location: region:438994-442658:1
so has part: feature:438994-439056:1:exon
so has part: feature:442060-442658:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438994-439056:1:exon

position:439056:1
position: 439056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442060-442658:1:exon

position:442060:1
position: 442060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960214
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 445928..450512
location: region:445928-450512:1
so has part: feature:445928-450512:1:exon
subclass of: SO_0000011

111960214
type: Gene
SIO_000068: ncbigene

position:445928:1
position: 445928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450512:1
position: 450512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445928-450512:1:exon

LOC111960214
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960214
product: uncharacterized LOC111960214, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002876781.1
SIO_010081: LOC111960214
subclass of: SO_0000673
so part of: LOC111960214
location: join(445928..446011,447065..447445,449559..450512)
location: region:445928-450512:1
so has part: feature:445928-446011:1:exon
so has part: feature:447065-447445:1:exon
so has part: feature:449559-450512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445928-446011:1:exon

position:446011:1
position: 446011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447065-447445:1:exon

position:447065:1
position: 447065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447445:1
position: 447445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449559-450512:1:exon

position:449559:1
position: 449559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960214
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960214
product: uncharacterized LOC111960214, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002876782.1
SIO_010081: LOC111960214
subclass of: SO_0000673
so part of: LOC111960214
location: join(445928..446011,447065..447109,447376..447445,449559..450512)
location: region:445928-450512:1
so has part: feature:445928-446011:1:exon
so has part: feature:447065-447109:1:exon
so has part: feature:447376-447445:1:exon
so has part: feature:449559-450512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445928-446011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447065-447109:1:exon

position:447109:1
position: 447109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447376-447445:1:exon

position:447376:1
position: 447376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:449559-450512:1:exon

LOC111960303
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(466213..471050)
location: region:466213-471050:-1
so has part: feature:466213-471050:-1:exon
subclass of: SO_0000010

111960303
type: Gene
SIO_000068: ncbigene

position:466213:-1
position: 466213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471050:-1
position: 471050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466213-471050:-1:exon

LOC111960303
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960303
product: transcription factor Sox-19b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_023982254.1
SIO_010081: LOC111960303
subclass of: SO_0000673
so part of: LOC111960303
location: complement(join(466213..468030,470015..471050))
location: region:466213-471050:-1
so has part: feature:470015-471050:-1:exon
so has part: feature:466213-468030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470015-471050:-1:exon

position:470015:-1
position: 470015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466213-468030:-1:exon

position:468030:-1
position: 468030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960303
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sox-19b
translation: MYSMMEHELKPAGQQQQQQQQQQHQTTQGMSPVTGNIGNSHLGSKSVCPPGGDPMDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPDYKYKPRRKTKPLLKKDNQMAKYPLSAGNLLAAAAAQGQGGSARMESYGWGPAGGYAGMQNEALGYTQQLHRYDLSALQYPQAMTAAQTYMNGANTYSPMSYSSSSQQPSPVMSMVKPEPVSHSPTGGPNHHRGPLQGDLRDMISMYIPGGDASDPAAQRGGYSVQQHYLSGTVPLSHI
SIO_010081: LOC111960303
subclass of: SO_0000673
so part of: LOC111960303
location: complement(join(467784..468030,470015..470676))
location: region:467784-470676:-1
so has part: feature:470015-470676:-1:exon
so has part: feature:467784-468030:-1:exon

XP_023838022.1
type: Protein
SIO_000068: ncbiprotein

position:467784:-1
position: 467784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470676:-1
position: 470676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470015-470676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467784-468030:-1:exon

LOC111960348
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(495224..498431)
location: region:495224-498431:-1
so has part: feature:495224-498431:-1:exon

111960348
type: Gene
SIO_000068: ncbigene

position:495224:-1
position: 495224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498431:-1
position: 498431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495224-498431:-1:exon

LOC111960348
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960348
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111960348
subclass of: SO_0000673
so part of: LOC111960348
location: complement(495224..495598)
location: region:495224-495598:-1
so has part: feature:495224-495598:-1:exon

position:495598:-1
position: 495598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495224-495598:-1:exon

LOC111960474
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960474
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(495862..495994)
location: region:495862-495994:-1
so has part: feature:495862-495994:-1:exon
subclass of: SO_0000578

111960474
type: Gene
SIO_000068: ncbigene

position:495862:-1
position: 495862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495994:-1
position: 495994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495862-495994:-1:exon

LOC111960474
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: snoRNA
gene: LOC111960474
product: small nucleolar RNA SNORD10
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01290
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002876854.1
SIO_010081: LOC111960474
subclass of: SO_0000673
so part of: LOC111960474
location: complement(495862..495994)
location: region:495862-495994:-1
so has part: feature:495862-495994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:495862-495994:-1:exon

LOC111960348
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960348
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111960348
subclass of: SO_0000673
so part of: LOC111960348
location: complement(496514..496591)
location: region:496514-496591:-1
so has part: feature:496514-496591:-1:exon

position:496514:-1
position: 496514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496591:-1
position: 496591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496514-496591:-1:exon

LOC111960348
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960348
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111960348
subclass of: SO_0000673
so part of: LOC111960348
location: complement(496889..496977)
location: region:496889-496977:-1
so has part: feature:496889-496977:-1:exon

position:496889:-1
position: 496889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496977:-1
position: 496977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496889-496977:-1:exon

LOC111960348
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960348
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111960348
subclass of: SO_0000673
so part of: LOC111960348
location: complement(498060..498431)
location: region:498060-498431:-1
so has part: feature:498060-498431:-1:exon

position:498060:-1
position: 498060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498060-498431:-1:exon

LOC111960347
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(499079..510785)
location: region:499079-510785:-1
so has part: feature:499079-510785:-1:exon
subclass of: SO_0000010

111960347
type: Gene
SIO_000068: ncbigene

position:499079:-1
position: 499079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510785:-1
position: 510785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499079-510785:-1:exon

LOC111960347
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960347
product: eukaryotic initiation factor 4A-I
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_023982320.1
SIO_010081: LOC111960347
subclass of: SO_0000673
so part of: LOC111960347
location: complement(join(499079..499459,500415..500494,500793..500882,501945..502082,502732..502875,506616..506725,507316..507484,508166..508305,508884..509016,509323..509374,510729..510785))
location: region:499079-510785:-1
so has part: feature:510729-510785:-1:exon
so has part: feature:509323-509374:-1:exon
so has part: feature:508884-509016:-1:exon
so has part: feature:508166-508305:-1:exon
so has part: feature:507316-507484:-1:exon
so has part: feature:506616-506725:-1:exon
so has part: feature:502732-502875:-1:exon
so has part: feature:501945-502082:-1:exon
so has part: feature:500793-500882:-1:exon
so has part: feature:500415-500494:-1:exon
so has part: feature:499079-499459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510729-510785:-1:exon

position:510729:-1
position: 510729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509323-509374:-1:exon

position:509323:-1
position: 509323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509374:-1
position: 509374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:508884-509016:-1:exon

position:508884:-1
position: 508884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509016:-1
position: 509016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:508166-508305:-1:exon

position:508166:-1
position: 508166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508305:-1
position: 508305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:507316-507484:-1:exon

position:507316:-1
position: 507316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507484:-1
position: 507484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:506616-506725:-1:exon

position:506616:-1
position: 506616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506725:-1
position: 506725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:502732-502875:-1:exon

position:502732:-1
position: 502732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502875:-1
position: 502875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:501945-502082:-1:exon

position:501945:-1
position: 501945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502082:-1
position: 502082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:500793-500882:-1:exon

position:500793:-1
position: 500793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500882:-1
position: 500882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:500415-500494:-1:exon

position:500415:-1
position: 500415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500494:-1
position: 500494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:499079-499459:-1:exon

position:499459:-1
position: 499459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960347
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic initiation factor 4A-I
translation: MSAEYEDRPPRDNGPEGMEPDGIIESNWNEIVDSFDEMNLGEKLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDMELKGTQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRNEVTKLQAEAPHIVVGTPGRVFDMLNRKYLASKNIKMFVLDEADEMLSRGFKDQIYEIFQKLPTSTQVVLLSATMPQDVLEVTKKFMREPIRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTTVEEMPMNVADLI
SIO_010081: LOC111960347
subclass of: SO_0000673
so part of: LOC111960347
location: complement(join(499315..499459,500415..500494,500793..500882,501945..502082,502732..502875,506616..506725,507316..507484,508166..508305,508884..509016,509323..509374,510729..510751))
location: region:499315-510751:-1
so has part: feature:510729-510751:-1:exon
so has part: feature:509323-509374:-1:exon
so has part: feature:508884-509016:-1:exon
so has part: feature:508166-508305:-1:exon
so has part: feature:507316-507484:-1:exon
so has part: feature:506616-506725:-1:exon
so has part: feature:502732-502875:-1:exon
so has part: feature:501945-502082:-1:exon
so has part: feature:500793-500882:-1:exon
so has part: feature:500415-500494:-1:exon
so has part: feature:499315-499459:-1:exon

XP_023838088.1
type: Protein
SIO_000068: ncbiprotein

position:499315:-1
position: 499315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510751:-1
position: 510751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510729-510751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:509323-509374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:508884-509016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508166-508305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507316-507484:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506616-506725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502732-502875:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:501945-502082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500793-500882:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:500415-500494:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:499315-499459:-1:exon

LOC111960470
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960470
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(499719..499887)
location: region:499719-499887:-1
so has part: feature:499719-499887:-1:exon
subclass of: SO_0000578

111960470
type: Gene
SIO_000068: ncbigene

position:499719:-1
position: 499719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499887:-1
position: 499887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499719-499887:-1:exon

LOC111960470
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: snoRNA
gene: LOC111960470
product: small nucleolar RNA SNORD10
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01290
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002876851.1
SIO_010081: LOC111960470
subclass of: SO_0000673
so part of: LOC111960470
location: complement(499719..499887)
location: region:499719-499887:-1
so has part: feature:499719-499887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499719-499887:-1:exon

LOC111960469
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960469
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(506917..507085)
location: region:506917-507085:-1
so has part: feature:506917-507085:-1:exon
subclass of: SO_0000578

111960469
type: Gene
SIO_000068: ncbigene

position:506917:-1
position: 506917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507085:-1
position: 507085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506917-507085:-1:exon

LOC111960469
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: snoRNA
gene: LOC111960469
product: small nucleolar RNA SNORD10
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01290
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002876850.1
SIO_010081: LOC111960469
subclass of: SO_0000673
so part of: LOC111960469
location: complement(506917..507085)
location: region:506917-507085:-1
so has part: feature:506917-507085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506917-507085:-1:exon

LOC111960267
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516139..539916)
location: region:516139-539916:-1
so has part: feature:516139-539916:-1:exon
subclass of: SO_0000010

111960267
type: Gene
SIO_000068: ncbigene

position:516139:-1
position: 516139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539916:-1
position: 539916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516139-539916:-1:exon

LOC111960267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960267
product: sentrin-specific protease 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_023982190.2
SIO_010081: LOC111960267
subclass of: SO_0000673
so part of: LOC111960267
location: complement(join(516139..516995,517646..517696,517790..517873,518115..518252,520157..520234,523964..524011,531687..531834,536049..536160,537575..537730,538117..538911,539769..539916))
location: region:516139-539916:-1
so has part: feature:539769-539916:-1:exon
so has part: feature:538117-538911:-1:exon
so has part: feature:537575-537730:-1:exon
so has part: feature:536049-536160:-1:exon
so has part: feature:531687-531834:-1:exon
so has part: feature:523964-524011:-1:exon
so has part: feature:520157-520234:-1:exon
so has part: feature:518115-518252:-1:exon
so has part: feature:517790-517873:-1:exon
so has part: feature:517646-517696:-1:exon
so has part: feature:516139-516995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539769-539916:-1:exon

position:539769:-1
position: 539769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:538117-538911:-1:exon

position:538117:-1
position: 538117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538911:-1
position: 538911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537575-537730:-1:exon

position:537575:-1
position: 537575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537730:-1
position: 537730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:536049-536160:-1:exon

position:536049:-1
position: 536049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536160:-1
position: 536160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:531687-531834:-1:exon

position:531687:-1
position: 531687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531834:-1
position: 531834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523964-524011:-1:exon

position:523964:-1
position: 523964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524011:-1
position: 524011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:520157-520234:-1:exon

position:520157:-1
position: 520157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520234:-1
position: 520234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:518115-518252:-1:exon

position:518115:-1
position: 518115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518252:-1
position: 518252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:517790-517873:-1:exon

position:517790:-1
position: 517790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517873:-1
position: 517873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:517646-517696:-1:exon

position:517646:-1
position: 517646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517696:-1
position: 517696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:516139-516995:-1:exon

position:516995:-1
position: 516995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960267
product: sentrin-specific protease 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_023982191.1
SIO_010081: LOC111960267
subclass of: SO_0000673
so part of: LOC111960267
location: complement(join(516139..516995,517646..517696,517790..517873,518115..518252,520157..520234,523964..524011,531687..531834,536049..536160,537575..537715,538117..538911,539769..539915))
location: region:516139-539915:-1
so has part: feature:539769-539915:-1:exon
so has part: feature:538117-538911:-1:exon
so has part: feature:537575-537715:-1:exon
so has part: feature:536049-536160:-1:exon
so has part: feature:531687-531834:-1:exon
so has part: feature:523964-524011:-1:exon
so has part: feature:520157-520234:-1:exon
so has part: feature:518115-518252:-1:exon
so has part: feature:517790-517873:-1:exon
so has part: feature:517646-517696:-1:exon
so has part: feature:516139-516995:-1:exon

position:539915:-1
position: 539915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539769-539915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:538117-538911:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537575-537715:-1:exon

position:537715:-1
position: 537715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:536049-536160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531687-531834:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523964-524011:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520157-520234:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:518115-518252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517790-517873:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517646-517696:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:516139-516995:-1:exon

LOC111960267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 3 isoform X2
translation: MRDSGSSLAQNRWQGELGLAVGQEDSGGGGVGISGGHLGMDPTSTHQMPSPMHLKLDQKEREAWDAEYMEELEREEMEEDGDEEEDEEEVDFEEGEGWDEEEQEDEEEEDGEEAEVEWEVPHMVPTTSLQEQNHHHQLQAPLEDDDDDDNDNNQAENKARDFPSNPIQSRLNVLRQRRLRRWRKLRSHSGLRSRLTQHWKTWRQRALWVGTLGHRRARKWPQYSQYANRHRRGADPGLSPLSEDERLSGSERDDRLNGYSGDYPSIQMGVLGEPEASYSIVREKPVEVALTEEHMSCVHGILDESLQKYGSLIPIHADDVVEKLQDIFNDNFSQPHRKAVVQHLIQSYQRSSGTAMVRGFRVNYKRHVLTMDDLSTLYGQNWLNDQVMNMYGDLVMDSVPEKVHFFNSFFYDKLRTKGYDGVKRWTKNVDIFQKDLLLIPIHLEVHWSLVSVDIPRRAITYFDSQRTLNRRCPKHIAKYLQAEAVKKDQRDFLTGWKGYFKMNVGRQNNDSDCGAFVLQYCKTLALGQPFSFGQQDMPKLRRLMYKELCHCKLSL
SIO_010081: LOC111960267
subclass of: SO_0000673
so part of: LOC111960267
location: complement(join(516885..516995,517646..517696,517790..517873,518115..518252,520157..520234,523964..524011,531687..531834,536049..536160,537575..537715,538117..538873))
location: region:516885-538873:-1
so has part: feature:538117-538873:-1:exon
so has part: feature:537575-537715:-1:exon
so has part: feature:536049-536160:-1:exon
so has part: feature:531687-531834:-1:exon
so has part: feature:523964-524011:-1:exon
so has part: feature:520157-520234:-1:exon
so has part: feature:518115-518252:-1:exon
so has part: feature:517790-517873:-1:exon
so has part: feature:517646-517696:-1:exon
so has part: feature:516885-516995:-1:exon

XP_023837959.1
type: Protein
SIO_000068: ncbiprotein

position:516885:-1
position: 516885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538873:-1
position: 538873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538117-538873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537575-537715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536049-536160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531687-531834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523964-524011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520157-520234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518115-518252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:517790-517873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517646-517696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516885-516995:-1:exon

LOC111960267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 3 isoform X1
translation: MRDSGSSLAQNRWQGELGLAVGQEDSGGGGVGISGGHLGMDPTSTHQMPSPMHLKLDQKEREAWDAEYMEELEREEMEEDGDEEEDEEEVDFEEGEGWDEEEQEDEEEEDGEEAEVEWEVPHMVPTTSLQEQNHHHQLQAPLEDDDDDDNDNNQAENKARDFPSNPIQSRLNVLRQRRLRRWRKLRSHSGLRSRLTQHWKTWRQRALWVGTLGHRRARKWPQYSQYANRHRRGADPGLSPLSEDERLSGSERVVIPADDRLNGYSGDYPSIQMGVLGEPEASYSIVREKPVEVALTEEHMSCVHGILDESLQKYGSLIPIHADDVVEKLQDIFNDNFSQPHRKAVVQHLIQSYQRSSGTAMVRGFRVNYKRHVLTMDDLSTLYGQNWLNDQVMNMYGDLVMDSVPEKVHFFNSFFYDKLRTKGYDGVKRWTKNVDIFQKDLLLIPIHLEVHWSLVSVDIPRRAITYFDSQRTLNRRCPKHIAKYLQAEAVKKDQRDFLTGWKGYFKMNVGRQNNDSDCGAFVLQYCKTLALGQPFSFGQQDMPKLRRLMYKELCHCKLSL
SIO_010081: LOC111960267
subclass of: SO_0000673
so part of: LOC111960267
location: complement(join(516885..516995,517646..517696,517790..517873,518115..518252,520157..520234,523964..524011,531687..531834,536049..536160,537575..537730,538117..538873))
location: region:516885-538873:-1
so has part: feature:538117-538873:-1:exon
so has part: feature:537575-537730:-1:exon
so has part: feature:536049-536160:-1:exon
so has part: feature:531687-531834:-1:exon
so has part: feature:523964-524011:-1:exon
so has part: feature:520157-520234:-1:exon
so has part: feature:518115-518252:-1:exon
so has part: feature:517790-517873:-1:exon
so has part: feature:517646-517696:-1:exon
so has part: feature:516885-516995:-1:exon

XP_023837958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538117-538873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537575-537730:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536049-536160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531687-531834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523964-524011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520157-520234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518115-518252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:517790-517873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517646-517696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516885-516995:-1:exon

LOC111960471
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960471
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(518788..518920)
location: region:518788-518920:-1
so has part: feature:518788-518920:-1:exon

111960471
type: Gene
SIO_000068: ncbigene

position:518788:-1
position: 518788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518920:-1
position: 518920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518788-518920:-1:exon

LOC111960471
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960471
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC111960471
subclass of: SO_0000673
so part of: LOC111960471
location: complement(518788..518920)
location: region:518788-518920:-1
so has part: feature:518788-518920:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518788-518920:-1:exon

LOC111960268
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 540072..569908
location: region:540072-569908:1
so has part: feature:540072-569908:1:exon
subclass of: SO_0000011

111960268
type: Gene
SIO_000068: ncbigene

position:540072:1
position: 540072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569908:1
position: 569908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540072-569908:1:exon

LOC111960268
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960268
product: uncharacterized LOC111960268, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002876797.1
SIO_010081: LOC111960268
subclass of: SO_0000673
so part of: LOC111960268
location: join(540072..540211,540756..541511,544123..544213,545199..545294,554221..554328,569572..569908)
location: region:540072-569908:1
so has part: feature:540072-540211:1:exon
so has part: feature:540756-541511:1:exon
so has part: feature:544123-544213:1:exon
so has part: feature:545199-545294:1:exon
so has part: feature:554221-554328:1:exon
so has part: feature:569572-569908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540072-540211:1:exon

position:540211:1
position: 540211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:540756-541511:1:exon

position:540756:1
position: 540756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541511:1
position: 541511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544123-544213:1:exon

position:544123:1
position: 544123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544213:1
position: 544213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:545199-545294:1:exon

position:545199:1
position: 545199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545294:1
position: 545294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:554221-554328:1:exon

position:554221:1
position: 554221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554328:1
position: 554328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:569572-569908:1:exon

position:569572:1
position: 569572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960268
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960268
product: uncharacterized LOC111960268, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002876799.1
SIO_010081: LOC111960268
subclass of: SO_0000673
so part of: LOC111960268
location: join(540072..540211,540756..541511,544123..544162,545199..545294,554221..554328,569572..569908)
location: region:540072-569908:1
so has part: feature:540072-540211:1:exon
so has part: feature:540756-541511:1:exon
so has part: feature:544123-544162:1:exon
so has part: feature:545199-545294:1:exon
so has part: feature:554221-554328:1:exon
so has part: feature:569572-569908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540072-540211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540756-541511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544123-544162:1:exon

position:544162:1
position: 544162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:545199-545294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554221-554328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:569572-569908:1:exon

LOC111960268
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960268
product: uncharacterized LOC111960268, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002876798.1
SIO_010081: LOC111960268
subclass of: SO_0000673
so part of: LOC111960268
location: join(540072..540211,540756..541095,541276..541511,544123..544213,545199..545294,554221..554328,569572..569908)
location: region:540072-569908:1
so has part: feature:540072-540211:1:exon
so has part: feature:540756-541095:1:exon
so has part: feature:541276-541511:1:exon
so has part: feature:544123-544213:1:exon
so has part: feature:545199-545294:1:exon
so has part: feature:554221-554328:1:exon
so has part: feature:569572-569908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540072-540211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540756-541095:1:exon

position:541095:1
position: 541095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:541276-541511:1:exon

position:541276:1
position: 541276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:544123-544213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545199-545294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554221-554328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:569572-569908:1:exon

LOC111960302
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(577382..587262)
location: region:577382-587262:-1
so has part: feature:577382-587262:-1:exon
subclass of: SO_0000010

111960302
type: Gene
SIO_000068: ncbigene

position:577382:-1
position: 577382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587262:-1
position: 587262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577382-587262:-1:exon

LOC111960302
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960302
product: serine protease HTRA3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023982252.1
SIO_010081: LOC111960302
subclass of: SO_0000673
so part of: LOC111960302
location: complement(join(577382..578776,578965..579060,579195..579252,579763..579877,580176..580208,580388..580582,581578..581800,582405..582504,586379..587262))
location: region:577382-587262:-1
so has part: feature:586379-587262:-1:exon
so has part: feature:582405-582504:-1:exon
so has part: feature:581578-581800:-1:exon
so has part: feature:580388-580582:-1:exon
so has part: feature:580176-580208:-1:exon
so has part: feature:579763-579877:-1:exon
so has part: feature:579195-579252:-1:exon
so has part: feature:578965-579060:-1:exon
so has part: feature:577382-578776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586379-587262:-1:exon

position:586379:-1
position: 586379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582405-582504:-1:exon

position:582405:-1
position: 582405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582504:-1
position: 582504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581578-581800:-1:exon

position:581578:-1
position: 581578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581800:-1
position: 581800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:580388-580582:-1:exon

position:580388:-1
position: 580388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580582:-1
position: 580582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:580176-580208:-1:exon

position:580176:-1
position: 580176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580208:-1
position: 580208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:579763-579877:-1:exon

position:579763:-1
position: 579763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579877:-1
position: 579877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:579195-579252:-1:exon

position:579195:-1
position: 579195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579252:-1
position: 579252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:578965-579060:-1:exon

position:578965:-1
position: 578965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579060:-1
position: 579060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:577382-578776:-1:exon

position:578776:-1
position: 578776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960302
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960302
product: serine protease HTRA3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023982253.1
SIO_010081: LOC111960302
subclass of: SO_0000673
so part of: LOC111960302
location: complement(join(577382..578776,578965..579060,579195..579252,579763..579877,580176..580208,580388..580582,581578..581800,582405..582509,586379..586496))
location: region:577382-586496:-1
so has part: feature:586379-586496:-1:exon
so has part: feature:582405-582509:-1:exon
so has part: feature:581578-581800:-1:exon
so has part: feature:580388-580582:-1:exon
so has part: feature:580176-580208:-1:exon
so has part: feature:579763-579877:-1:exon
so has part: feature:579195-579252:-1:exon
so has part: feature:578965-579060:-1:exon
so has part: feature:577382-578776:-1:exon

position:586496:-1
position: 586496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586379-586496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582405-582509:-1:exon

position:582509:-1
position: 582509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581578-581800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580388-580582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580176-580208:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579763-579877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579195-579252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578965-579060:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577382-578776:-1:exon

LOC111960302
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease HTRA3 isoform X1
translation: MQVLLFATVLFCVEDFVRAEPKPKCTERCDVSTCPSPSCPMGYVPDRCNCCLVCAQGEGDPCGRKDDLPCGDGLDCKHPAGKRLAKGFCQCKLGHKVCGSDGNTYGNVCQLKAQSRKALQQGLPAINSVQKGPCKINQNKGTSHPTSPRYKFNFIADVVEKIAPAVVHIELFLRHPLFGRNVPLSSGSGFVMSETGLIVTNAHVVSSTTPMSGHQQLKVQMHSGDIYEATIKDIDKKSDIATIKVNSLKKLSVLLLGHSADLRPGEFVVAIGSPFALQNTVTTGIVSTAQRDGKELGIRDSDMGYVQTDAIINYGNSGGPLVNLDGEVIGINTLKVAAGISFAIPSDRITRFLNESMDKQSKEVRSLKKRFIGIRMLTITSALVEELKQQNPDFPEVTSGIYVHEVVPHSPAQKGGIRDGDIIVKLNGRPLLTTTDLQGALTQETTLLLEVRRGNDDLLFNIQPDVIMQ
SIO_010081: LOC111960302
subclass of: SO_0000673
so part of: LOC111960302
location: complement(join(578608..578776,578965..579060,579195..579252,579763..579877,580176..580208,580388..580582,581578..581800,582405..582504,586379..586799))
location: region:578608-586799:-1
so has part: feature:586379-586799:-1:exon
so has part: feature:582405-582504:-1:exon
so has part: feature:581578-581800:-1:exon
so has part: feature:580388-580582:-1:exon
so has part: feature:580176-580208:-1:exon
so has part: feature:579763-579877:-1:exon
so has part: feature:579195-579252:-1:exon
so has part: feature:578965-579060:-1:exon
so has part: feature:578608-578776:-1:exon

XP_023838020.1
type: Protein
SIO_000068: ncbiprotein

position:578608:-1
position: 578608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586799:-1
position: 586799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586379-586799:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582405-582504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581578-581800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580388-580582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580176-580208:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579763-579877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579195-579252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578965-579060:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:578608-578776:-1:exon

LOC111960302
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease HTRA3 isoform X2
translation: MQNQPKQSIGTSHPTSPRYKFNFIADVVEKIAPAVVHIELFLRHPLFGRNVPLSSGSGFVMSETGLIVTNAHVVSSTTPMSGHQQLKVQMHSGDIYEATIKDIDKKSDIATIKVNSLKKLSVLLLGHSADLRPGEFVVAIGSPFALQNTVTTGIVSTAQRDGKELGIRDSDMGYVQTDAIINYGNSGGPLVNLDGEVIGINTLKVAAGISFAIPSDRITRFLNESMDKQSKEVRSLKKRFIGIRMLTITSALVEELKQQNPDFPEVTSGIYVHEVVPHSPAQKGGIRDGDIIVKLNGRPLLTTTDLQGALTQETTLLLEVRRGNDDLLFNIQPDVIMQ
SIO_010081: LOC111960302
subclass of: SO_0000673
so part of: LOC111960302
location: complement(join(578608..578776,578965..579060,579195..579252,579763..579877,580176..580208,580388..580582,581578..581800,582405..582509,586379..586401))
location: region:578608-586401:-1
so has part: feature:586379-586401:-1:exon
so has part: feature:582405-582509:-1:exon
so has part: feature:581578-581800:-1:exon
so has part: feature:580388-580582:-1:exon
so has part: feature:580176-580208:-1:exon
so has part: feature:579763-579877:-1:exon
so has part: feature:579195-579252:-1:exon
so has part: feature:578965-579060:-1:exon
so has part: feature:578608-578776:-1:exon

XP_023838021.1
type: Protein
SIO_000068: ncbiprotein

position:586401:-1
position: 586401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586379-586401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582405-582509:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581578-581800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580388-580582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580176-580208:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579763-579877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579195-579252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578965-579060:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:578608-578776:-1:exon

LOC111960308
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(593521..613845)
location: region:593521-613845:-1
so has part: feature:593521-613845:-1:exon
subclass of: SO_0000010

111960308
type: Gene
SIO_000068: ncbigene

position:593521:-1
position: 593521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613845:-1
position: 613845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593521-613845:-1:exon

LOC111960308
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960308
product: SH3 domain and tetratricopeptide repeat-containing protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023982265.1
SIO_010081: LOC111960308
subclass of: SO_0000673
so part of: LOC111960308
location: complement(join(593521..594682,594998..595194,595528..595678,595864..595986,596074..596224,596317..596497,597026..597149,597381..597449,597807..597976,598146..599531,599679..599726,599889..600019,603200..603395,603561..603637,603765..603963,604235..604378,609099..609204,609848..609978,613332..613845))
location: region:593521-613845:-1
so has part: feature:613332-613845:-1:exon
so has part: feature:609848-609978:-1:exon
so has part: feature:609099-609204:-1:exon
so has part: feature:604235-604378:-1:exon
so has part: feature:603765-603963:-1:exon
so has part: feature:603561-603637:-1:exon
so has part: feature:603200-603395:-1:exon
so has part: feature:599889-600019:-1:exon
so has part: feature:599679-599726:-1:exon
so has part: feature:598146-599531:-1:exon
so has part: feature:597807-597976:-1:exon
so has part: feature:597381-597449:-1:exon
so has part: feature:597026-597149:-1:exon
so has part: feature:596317-596497:-1:exon
so has part: feature:596074-596224:-1:exon
so has part: feature:595864-595986:-1:exon
so has part: feature:595528-595678:-1:exon
so has part: feature:594998-595194:-1:exon
so has part: feature:593521-594682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613332-613845:-1:exon

position:613332:-1
position: 613332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609848-609978:-1:exon

position:609848:-1
position: 609848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609978:-1
position: 609978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609099-609204:-1:exon

position:609099:-1
position: 609099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609204:-1
position: 609204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604235-604378:-1:exon

position:604235:-1
position: 604235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604378:-1
position: 604378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:603765-603963:-1:exon

position:603765:-1
position: 603765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603963:-1
position: 603963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:603561-603637:-1:exon

position:603561:-1
position: 603561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603637:-1
position: 603637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:603200-603395:-1:exon

position:603200:-1
position: 603200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603395:-1
position: 603395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:599889-600019:-1:exon

position:599889:-1
position: 599889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600019:-1
position: 600019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:599679-599726:-1:exon

position:599679:-1
position: 599679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599726:-1
position: 599726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:598146-599531:-1:exon

position:598146:-1
position: 598146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599531:-1
position: 599531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:597807-597976:-1:exon

position:597807:-1
position: 597807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597976:-1
position: 597976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:597381-597449:-1:exon

position:597381:-1
position: 597381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597449:-1
position: 597449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:597026-597149:-1:exon

position:597026:-1
position: 597026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597149:-1
position: 597149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:596317-596497:-1:exon

position:596317:-1
position: 596317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596497:-1
position: 596497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:596074-596224:-1:exon

position:596074:-1
position: 596074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596224:-1
position: 596224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:595864-595986:-1:exon

position:595864:-1
position: 595864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595986:-1
position: 595986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:595528-595678:-1:exon

position:595528:-1
position: 595528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595678:-1
position: 595678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:594998-595194:-1:exon

position:594998:-1
position: 594998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595194:-1
position: 595194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:593521-594682:-1:exon

position:594682:-1
position: 594682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960308
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960308
product: SH3 domain and tetratricopeptide repeat-containing protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023982264.1
SIO_010081: LOC111960308
subclass of: SO_0000673
so part of: LOC111960308
location: complement(join(593521..594682,594998..595194,595528..595678,595864..595986,596074..596224,596317..596497,597026..597149,597381..597449,597807..597976,598146..599531,599679..599726,599889..600019,603200..603395,603561..603637,603765..603963,604235..604378,609099..609204,609848..609978,611786..611836,613332..613845))
location: region:593521-613845:-1
so has part: feature:613332-613845:-1:exon
so has part: feature:611786-611836:-1:exon
so has part: feature:609848-609978:-1:exon
so has part: feature:609099-609204:-1:exon
so has part: feature:604235-604378:-1:exon
so has part: feature:603765-603963:-1:exon
so has part: feature:603561-603637:-1:exon
so has part: feature:603200-603395:-1:exon
so has part: feature:599889-600019:-1:exon
so has part: feature:599679-599726:-1:exon
so has part: feature:598146-599531:-1:exon
so has part: feature:597807-597976:-1:exon
so has part: feature:597381-597449:-1:exon
so has part: feature:597026-597149:-1:exon
so has part: feature:596317-596497:-1:exon
so has part: feature:596074-596224:-1:exon
so has part: feature:595864-595986:-1:exon
so has part: feature:595528-595678:-1:exon
so has part: feature:594998-595194:-1:exon
so has part: feature:593521-594682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613332-613845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611786-611836:-1:exon

position:611786:-1
position: 611786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611836:-1
position: 611836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609848-609978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609099-609204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604235-604378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603765-603963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603561-603637:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603200-603395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599889-600019:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599679-599726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:598146-599531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:597807-597976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:597381-597449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:597026-597149:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:596317-596497:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:596074-596224:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:595864-595986:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:595528-595678:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:594998-595194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:593521-594682:-1:exon

LOC111960308
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960308
product: SH3 domain and tetratricopeptide repeat-containing protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_023982267.1
SIO_010081: LOC111960308
subclass of: SO_0000673
so part of: LOC111960308
location: complement(join(593521..594682,594998..595194,595528..595678,595864..595986,596074..596224,596317..596497,597026..597149,597381..597449,597807..597976,598146..599531,599679..599726,599889..600019,603200..603395,603561..603637,603765..603963,604235..604378,604511..605898))
location: region:593521-605898:-1
so has part: feature:604511-605898:-1:exon
so has part: feature:604235-604378:-1:exon
so has part: feature:603765-603963:-1:exon
so has part: feature:603561-603637:-1:exon
so has part: feature:603200-603395:-1:exon
so has part: feature:599889-600019:-1:exon
so has part: feature:599679-599726:-1:exon
so has part: feature:598146-599531:-1:exon
so has part: feature:597807-597976:-1:exon
so has part: feature:597381-597449:-1:exon
so has part: feature:597026-597149:-1:exon
so has part: feature:596317-596497:-1:exon
so has part: feature:596074-596224:-1:exon
so has part: feature:595864-595986:-1:exon
so has part: feature:595528-595678:-1:exon
so has part: feature:594998-595194:-1:exon
so has part: feature:593521-594682:-1:exon

position:605898:-1
position: 605898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604511-605898:-1:exon

position:604511:-1
position: 604511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604235-604378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603765-603963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603561-603637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:603200-603395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599889-600019:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599679-599726:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598146-599531:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597807-597976:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597381-597449:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597026-597149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:596317-596497:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596074-596224:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:595864-595986:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595528-595678:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:594998-595194:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:593521-594682:-1:exon

LOC111960308
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960308
product: SH3 domain and tetratricopeptide repeat-containing protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_023982266.1
SIO_010081: LOC111960308
subclass of: SO_0000673
so part of: LOC111960308
location: complement(join(593521..594682,594998..595194,595528..595678,595864..595986,596074..596224,596317..596497,597026..597149,597381..597449,597807..597976,598146..599531,599679..599726,599889..600019,603200..603395,603561..603637,603765..603963,604235..604378,604490..605898))
location: region:593521-605898:-1
so has part: feature:604490-605898:-1:exon
so has part: feature:604235-604378:-1:exon
so has part: feature:603765-603963:-1:exon
so has part: feature:603561-603637:-1:exon
so has part: feature:603200-603395:-1:exon
so has part: feature:599889-600019:-1:exon
so has part: feature:599679-599726:-1:exon
so has part: feature:598146-599531:-1:exon
so has part: feature:597807-597976:-1:exon
so has part: feature:597381-597449:-1:exon
so has part: feature:597026-597149:-1:exon
so has part: feature:596317-596497:-1:exon
so has part: feature:596074-596224:-1:exon
so has part: feature:595864-595986:-1:exon
so has part: feature:595528-595678:-1:exon
so has part: feature:594998-595194:-1:exon
so has part: feature:593521-594682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604490-605898:-1:exon

position:604490:-1
position: 604490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604235-604378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603765-603963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603561-603637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:603200-603395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599889-600019:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599679-599726:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598146-599531:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597807-597976:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597381-597449:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597026-597149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:596317-596497:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596074-596224:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:595864-595986:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595528-595678:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:594998-595194:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:593521-594682:-1:exon

LOC111960308
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X2
translation: MSTVEQEVEPVAVVNRKDTNTRHYRRELSAEDHNHDPVKKGTRSRKMALPMLLAMVEGPDKLPADEGSQEVLRGKLRLLEADSMEVNALFMELSARLVSINCEENAIFVTFKTFEEIWRFTTYYTMGFLGQCMENLLLDQDFWLSSLDQEYFAIEISIQEETLNLMYKGILMQEGSLFASCSSTQMFDSSTSGRDLYLEQGDIALFEPPFLGSGWTVLSLGDGARGTKPKPALEPVIPFHQWFLKSCGENILVGSGKPACDFPCQFATGSCVATVEYDAGGPDELSLEQGDRIIIVGLLVSCFEWFTGRLERTGEVGLVMTTLVRPADSLCEASDIFLEKEERLFFNLKEDQIKEETIALLKKINQNDVGHVYKLDLIAQPDSPNEPTQRRDGSQGNMDAHQQAELRRKIEEILLKGKMKSKVPHATVTTNGTLEDHSETSKTTLPSGPHFTIQPVEEGTTTNQEKFLPLLSFLGGSNYKPEFGALYGQTPERLLATFTGHSDDVDKLVAYLGVARETARKKRLHWSQSRLCFLLGKLCAGRSKFSQARVYFEEALSVPRGGFTDMLMLASIYANLAVIYLMQKNTEKYLALSERIAALLMGIPYCVSTVEKDSEVLKFILKKAVLSHNKMAEARACFLLAKLHWRRGEAADTVPFLERLLVLLAEPPGVRSVAPSHGYLSLGRLYSQLSLPHLCVSSARRATMHPSARLADCLNGTGLVLENTDRLYGIRKQDVAIPAQVAPYLSRSLSFTGRLDGVGGTGDQALSQALTLCLSQLFQVHGMLGHAVRSMHTLIDHHRAPSSSSGTTSIPERNIALVWLAWLHICNRQPEVSLDVLDSVLASMPEHCTTPQEGLVHNMRGVALRSMGDLRRAAESYQTAIDVCEEFEDRANWAVAEANLGLLCLKAGAKRLAEQHLTEAVEMLSALEGQEHEVNFTTVLLELGQYYVNQRHLDRGKIYYEWALLMAIKSNHSDSQLSVTRRLCHLYRAVCPDEAQCIIYNEHQLALLVTRGDRRQEGEVLETISQLYLSLGTERARRSALDYTKRSLGIFIDLGRREKEAYAWLQAGKIYHLLGQTELVDLYLQVAQDVGVSTGDTHFILQLLEAAGDVFFNSSTEREKAVCFYEDRALPIAVKTSSTEVRLRLSNKLVELLLQMKLYGEAVEYAQTALDISVKLGNGLNERVAFHRLATLYHCLGQFELAEHYYLKALSLCPTPLEFDEETLYYVRVYRTLGDIIFYDLKDPYDAAGYYHLALAAAMDIGNKKSQLQLCTRLATIYHNFLVDRELSLFFYQKARAFASDLNVRRINLSPDQIFSSMSQYKMNRVNIQEPRNKSPSNGHLGLKLVRRGERL
SIO_010081: LOC111960308
subclass of: SO_0000673
so part of: LOC111960308
location: complement(join(594350..594682,594998..595194,595528..595678,595864..595986,596074..596224,596317..596497,597026..597149,597381..597449,597807..597976,598146..599531,599679..599726,599889..600019,603200..603395,603561..603637,603765..603963,604235..604378,609099..609204,609848..609978,613332..613473))
location: region:594350-613473:-1
so has part: feature:613332-613473:-1:exon
so has part: feature:609848-609978:-1:exon
so has part: feature:609099-609204:-1:exon
so has part: feature:604235-604378:-1:exon
so has part: feature:603765-603963:-1:exon
so has part: feature:603561-603637:-1:exon
so has part: feature:603200-603395:-1:exon
so has part: feature:599889-600019:-1:exon
so has part: feature:599679-599726:-1:exon
so has part: feature:598146-599531:-1:exon
so has part: feature:597807-597976:-1:exon
so has part: feature:597381-597449:-1:exon
so has part: feature:597026-597149:-1:exon
so has part: feature:596317-596497:-1:exon
so has part: feature:596074-596224:-1:exon
so has part: feature:595864-595986:-1:exon
so has part: feature:595528-595678:-1:exon
so has part: feature:594998-595194:-1:exon
so has part: feature:594350-594682:-1:exon

XP_023838033.1
type: Protein
SIO_000068: ncbiprotein

position:594350:-1
position: 594350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613473:-1
position: 613473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613332-613473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609848-609978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609099-609204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604235-604378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:603765-603963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603561-603637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603200-603395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:599889-600019:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599679-599726:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598146-599531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597807-597976:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:597381-597449:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:597026-597149:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596317-596497:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:596074-596224:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:595864-595986:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:595528-595678:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:594998-595194:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:594350-594682:-1:exon

LOC111960308
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
translation: MSTVEQEVEPVAVVNRKDTNTRHYRRELSAEDHNHDPVKKGTRSRKMERSSSRGAGTSEDGFPTALPMLLAMVEGPDKLPADEGSQEVLRGKLRLLEADSMEVNALFMELSARLVSINCEENAIFVTFKTFEEIWRFTTYYTMGFLGQCMENLLLDQDFWLSSLDQEYFAIEISIQEETLNLMYKGILMQEGSLFASCSSTQMFDSSTSGRDLYLEQGDIALFEPPFLGSGWTVLSLGDGARGTKPKPALEPVIPFHQWFLKSCGENILVGSGKPACDFPCQFATGSCVATVEYDAGGPDELSLEQGDRIIIVGLLVSCFEWFTGRLERTGEVGLVMTTLVRPADSLCEASDIFLEKEERLFFNLKEDQIKEETIALLKKINQNDVGHVYKLDLIAQPDSPNEPTQRRDGSQGNMDAHQQAELRRKIEEILLKGKMKSKVPHATVTTNGTLEDHSETSKTTLPSGPHFTIQPVEEGTTTNQEKFLPLLSFLGGSNYKPEFGALYGQTPERLLATFTGHSDDVDKLVAYLGVARETARKKRLHWSQSRLCFLLGKLCAGRSKFSQARVYFEEALSVPRGGFTDMLMLASIYANLAVIYLMQKNTEKYLALSERIAALLMGIPYCVSTVEKDSEVLKFILKKAVLSHNKMAEARACFLLAKLHWRRGEAADTVPFLERLLVLLAEPPGVRSVAPSHGYLSLGRLYSQLSLPHLCVSSARRATMHPSARLADCLNGTGLVLENTDRLYGIRKQDVAIPAQVAPYLSRSLSFTGRLDGVGGTGDQALSQALTLCLSQLFQVHGMLGHAVRSMHTLIDHHRAPSSSSGTTSIPERNIALVWLAWLHICNRQPEVSLDVLDSVLASMPEHCTTPQEGLVHNMRGVALRSMGDLRRAAESYQTAIDVCEEFEDRANWAVAEANLGLLCLKAGAKRLAEQHLTEAVEMLSALEGQEHEVNFTTVLLELGQYYVNQRHLDRGKIYYEWALLMAIKSNHSDSQLSVTRRLCHLYRAVCPDEAQCIIYNEHQLALLVTRGDRRQEGEVLETISQLYLSLGTERARRSALDYTKRSLGIFIDLGRREKEAYAWLQAGKIYHLLGQTELVDLYLQVAQDVGVSTGDTHFILQLLEAAGDVFFNSSTEREKAVCFYEDRALPIAVKTSSTEVRLRLSNKLVELLLQMKLYGEAVEYAQTALDISVKLGNGLNERVAFHRLATLYHCLGQFELAEHYYLKALSLCPTPLEFDEETLYYVRVYRTLGDIIFYDLKDPYDAAGYYHLALAAAMDIGNKKSQLQLCTRLATIYHNFLVDRELSLFFYQKARAFASDLNVRRINLSPDQIFSSMSQYKMNRVNIQEPRNKSPSNGHLGLKLVRRGERL
SIO_010081: LOC111960308
subclass of: SO_0000673
so part of: LOC111960308
location: complement(join(594350..594682,594998..595194,595528..595678,595864..595986,596074..596224,596317..596497,597026..597149,597381..597449,597807..597976,598146..599531,599679..599726,599889..600019,603200..603395,603561..603637,603765..603963,604235..604378,609099..609204,609848..609978,611786..611836,613332..613473))
location: region:594350-613473:-1
so has part: feature:613332-613473:-1:exon
so has part: feature:611786-611836:-1:exon
so has part: feature:609848-609978:-1:exon
so has part: feature:609099-609204:-1:exon
so has part: feature:604235-604378:-1:exon
so has part: feature:603765-603963:-1:exon
so has part: feature:603561-603637:-1:exon
so has part: feature:603200-603395:-1:exon
so has part: feature:599889-600019:-1:exon
so has part: feature:599679-599726:-1:exon
so has part: feature:598146-599531:-1:exon
so has part: feature:597807-597976:-1:exon
so has part: feature:597381-597449:-1:exon
so has part: feature:597026-597149:-1:exon
so has part: feature:596317-596497:-1:exon
so has part: feature:596074-596224:-1:exon
so has part: feature:595864-595986:-1:exon
so has part: feature:595528-595678:-1:exon
so has part: feature:594998-595194:-1:exon
so has part: feature:594350-594682:-1:exon

XP_023838032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:613332-613473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611786-611836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609848-609978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609099-609204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604235-604378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603765-603963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603561-603637:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603200-603395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599889-600019:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599679-599726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:598146-599531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:597807-597976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:597381-597449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:597026-597149:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:596317-596497:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:596074-596224:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:595864-595986:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:595528-595678:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:594998-595194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:594350-594682:-1:exon

LOC111960308
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X3
translation: MENLLLDQDFWLSSLDQEYFAIEISIQEETLNLMYKGILMQEGSLFASCSSTQMFDSSTSGRDLYLEQGDIALFEPPFLGSGWTVLSLGDGARGTKPKPALEPVIPFHQWFLKSCGENILVGSGKPACDFPCQFATGSCVATVEYDAGGPDELSLEQGDRIIIVGLLVSCFEWFTGRLERTGEVGLVMTTLVRPADSLCEASDIFLEKEERLFFNLKEDQIKEETIALLKKINQNDVGHVYKLDLIAQPDSPNEPTQRRDGSQGNMDAHQQAELRRKIEEILLKGKMKSKVPHATVTTNGTLEDHSETSKTTLPSGPHFTIQPVEEGTTTNQEKFLPLLSFLGGSNYKPEFGALYGQTPERLLATFTGHSDDVDKLVAYLGVARETARKKRLHWSQSRLCFLLGKLCAGRSKFSQARVYFEEALSVPRGGFTDMLMLASIYANLAVIYLMQKNTEKYLALSERIAALLMGIPYCVSTVEKDSEVLKFILKKAVLSHNKMAEARACFLLAKLHWRRGEAADTVPFLERLLVLLAEPPGVRSVAPSHGYLSLGRLYSQLSLPHLCVSSARRATMHPSARLADCLNGTGLVLENTDRLYGIRKQDVAIPAQVAPYLSRSLSFTGRLDGVGGTGDQALSQALTLCLSQLFQVHGMLGHAVRSMHTLIDHHRAPSSSSGTTSIPERNIALVWLAWLHICNRQPEVSLDVLDSVLASMPEHCTTPQEGLVHNMRGVALRSMGDLRRAAESYQTAIDVCEEFEDRANWAVAEANLGLLCLKAGAKRLAEQHLTEAVEMLSALEGQEHEVNFTTVLLELGQYYVNQRHLDRGKIYYEWALLMAIKSNHSDSQLSVTRRLCHLYRAVCPDEAQCIIYNEHQLALLVTRGDRRQEGEVLETISQLYLSLGTERARRSALDYTKRSLGIFIDLGRREKEAYAWLQAGKIYHLLGQTELVDLYLQVAQDVGVSTGDTHFILQLLEAAGDVFFNSSTEREKAVCFYEDRALPIAVKTSSTEVRLRLSNKLVELLLQMKLYGEAVEYAQTALDISVKLGNGLNERVAFHRLATLYHCLGQFELAEHYYLKALSLCPTPLEFDEETLYYVRVYRTLGDIIFYDLKDPYDAAGYYHLALAAAMDIGNKKSQLQLCTRLATIYHNFLVDRELSLFFYQKARAFASDLNVRRINLSPDQIFSSMSQYKMNRVNIQEPRNKSPSNGHLGLKLVRRGERL
SIO_010081: LOC111960308
subclass of: SO_0000673
so part of: LOC111960308
location: complement(join(594350..594682,594998..595194,595528..595678,595864..595986,596074..596224,596317..596497,597026..597149,597381..597449,597807..597976,598146..599531,599679..599726,599889..600019,603200..603395,603561..603637,603765..603963,604235..604361))
location: region:594350-604361:-1
so has part: feature:604235-604361:-1:exon
so has part: feature:603765-603963:-1:exon
so has part: feature:603561-603637:-1:exon
so has part: feature:603200-603395:-1:exon
so has part: feature:599889-600019:-1:exon
so has part: feature:599679-599726:-1:exon
so has part: feature:598146-599531:-1:exon
so has part: feature:597807-597976:-1:exon
so has part: feature:597381-597449:-1:exon
so has part: feature:597026-597149:-1:exon
so has part: feature:596317-596497:-1:exon
so has part: feature:596074-596224:-1:exon
so has part: feature:595864-595986:-1:exon
so has part: feature:595528-595678:-1:exon
so has part: feature:594998-595194:-1:exon
so has part: feature:594350-594682:-1:exon

XP_023838034.1
type: Protein
SIO_000068: ncbiprotein

position:604361:-1
position: 604361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604235-604361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603765-603963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603561-603637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603200-603395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599889-600019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599679-599726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598146-599531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597807-597976:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597381-597449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597026-597149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:596317-596497:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:596074-596224:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595864-595986:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:595528-595678:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:594998-595194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:594350-594682:-1:exon

LOC111960308
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X3
translation: MENLLLDQDFWLSSLDQEYFAIEISIQEETLNLMYKGILMQEGSLFASCSSTQMFDSSTSGRDLYLEQGDIALFEPPFLGSGWTVLSLGDGARGTKPKPALEPVIPFHQWFLKSCGENILVGSGKPACDFPCQFATGSCVATVEYDAGGPDELSLEQGDRIIIVGLLVSCFEWFTGRLERTGEVGLVMTTLVRPADSLCEASDIFLEKEERLFFNLKEDQIKEETIALLKKINQNDVGHVYKLDLIAQPDSPNEPTQRRDGSQGNMDAHQQAELRRKIEEILLKGKMKSKVPHATVTTNGTLEDHSETSKTTLPSGPHFTIQPVEEGTTTNQEKFLPLLSFLGGSNYKPEFGALYGQTPERLLATFTGHSDDVDKLVAYLGVARETARKKRLHWSQSRLCFLLGKLCAGRSKFSQARVYFEEALSVPRGGFTDMLMLASIYANLAVIYLMQKNTEKYLALSERIAALLMGIPYCVSTVEKDSEVLKFILKKAVLSHNKMAEARACFLLAKLHWRRGEAADTVPFLERLLVLLAEPPGVRSVAPSHGYLSLGRLYSQLSLPHLCVSSARRATMHPSARLADCLNGTGLVLENTDRLYGIRKQDVAIPAQVAPYLSRSLSFTGRLDGVGGTGDQALSQALTLCLSQLFQVHGMLGHAVRSMHTLIDHHRAPSSSSGTTSIPERNIALVWLAWLHICNRQPEVSLDVLDSVLASMPEHCTTPQEGLVHNMRGVALRSMGDLRRAAESYQTAIDVCEEFEDRANWAVAEANLGLLCLKAGAKRLAEQHLTEAVEMLSALEGQEHEVNFTTVLLELGQYYVNQRHLDRGKIYYEWALLMAIKSNHSDSQLSVTRRLCHLYRAVCPDEAQCIIYNEHQLALLVTRGDRRQEGEVLETISQLYLSLGTERARRSALDYTKRSLGIFIDLGRREKEAYAWLQAGKIYHLLGQTELVDLYLQVAQDVGVSTGDTHFILQLLEAAGDVFFNSSTEREKAVCFYEDRALPIAVKTSSTEVRLRLSNKLVELLLQMKLYGEAVEYAQTALDISVKLGNGLNERVAFHRLATLYHCLGQFELAEHYYLKALSLCPTPLEFDEETLYYVRVYRTLGDIIFYDLKDPYDAAGYYHLALAAAMDIGNKKSQLQLCTRLATIYHNFLVDRELSLFFYQKARAFASDLNVRRINLSPDQIFSSMSQYKMNRVNIQEPRNKSPSNGHLGLKLVRRGERL
SIO_010081: LOC111960308
subclass of: SO_0000673
so part of: LOC111960308
location: complement(join(594350..594682,594998..595194,595528..595678,595864..595986,596074..596224,596317..596497,597026..597149,597381..597449,597807..597976,598146..599531,599679..599726,599889..600019,603200..603395,603561..603637,603765..603963,604235..604361))
location: region:594350-604361:-1
so has part: feature:604235-604361:-1:exon
so has part: feature:603765-603963:-1:exon
so has part: feature:603561-603637:-1:exon
so has part: feature:603200-603395:-1:exon
so has part: feature:599889-600019:-1:exon
so has part: feature:599679-599726:-1:exon
so has part: feature:598146-599531:-1:exon
so has part: feature:597807-597976:-1:exon
so has part: feature:597381-597449:-1:exon
so has part: feature:597026-597149:-1:exon
so has part: feature:596317-596497:-1:exon
so has part: feature:596074-596224:-1:exon
so has part: feature:595864-595986:-1:exon
so has part: feature:595528-595678:-1:exon
so has part: feature:594998-595194:-1:exon
so has part: feature:594350-594682:-1:exon

XP_023838035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:604235-604361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603765-603963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603561-603637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603200-603395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599889-600019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599679-599726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598146-599531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597807-597976:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597381-597449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597026-597149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:596317-596497:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:596074-596224:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595864-595986:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:595528-595678:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:594998-595194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:594350-594682:-1:exon

LOC111960380
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 618574..627295
location: region:618574-627295:1
so has part: feature:618574-627295:1:exon
subclass of: SO_0000010

111960380
type: Gene
SIO_000068: ncbigene

position:618574:1
position: 618574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627295:1
position: 627295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618574-627295:1:exon

LOC111960380
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960380
product: calcium-binding protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_023982352.1
SIO_010081: LOC111960380
subclass of: SO_0000673
so part of: LOC111960380
location: join(618574..618676,618873..618971,622220..622354,623365..623395,623756..623899,624696..624805,625240..625387,627093..627295)
location: region:618574-627295:1
so has part: feature:618574-618676:1:exon
so has part: feature:618873-618971:1:exon
so has part: feature:622220-622354:1:exon
so has part: feature:623365-623395:1:exon
so has part: feature:623756-623899:1:exon
so has part: feature:624696-624805:1:exon
so has part: feature:625240-625387:1:exon
so has part: feature:627093-627295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618574-618676:1:exon

position:618676:1
position: 618676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618873-618971:1:exon

position:618873:1
position: 618873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618971:1
position: 618971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622220-622354:1:exon

position:622220:1
position: 622220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622354:1
position: 622354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:623365-623395:1:exon

position:623365:1
position: 623365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623395:1
position: 623395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:623756-623899:1:exon

position:623756:1
position: 623756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623899:1
position: 623899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:624696-624805:1:exon

position:624696:1
position: 624696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624805:1
position: 624805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:625240-625387:1:exon

position:625240:1
position: 625240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625387:1
position: 625387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:627093-627295:1:exon

position:627093:1
position: 627093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960380
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960380
product: calcium-binding protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023982353.1
SIO_010081: LOC111960380
subclass of: SO_0000673
so part of: LOC111960380
location: join(618687..618773,618873..618971,622220..622354,623365..623395,623756..623899,624696..624805,625240..625387,627093..627295)
location: region:618687-627295:1
so has part: feature:618687-618773:1:exon
so has part: feature:618873-618971:1:exon
so has part: feature:622220-622354:1:exon
so has part: feature:623365-623395:1:exon
so has part: feature:623756-623899:1:exon
so has part: feature:624696-624805:1:exon
so has part: feature:625240-625387:1:exon
so has part: feature:627093-627295:1:exon

position:618687:1
position: 618687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618687-618773:1:exon

position:618773:1
position: 618773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618873-618971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622220-622354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623365-623395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623756-623899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:624696-624805:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625240-625387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:627093-627295:1:exon

LOC111960380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 4
translation: MEKIHTTLLCSVFGAERELAQAELDELDFAFKEFDYDCDGYLNYKDVAECMRTMGYMPTEMELLEIVQQIKMRMGGLMDFDDFCELMGPRIMGETVDMLGLKELRSAFSQFDQDCDGKISQDEMKEAVKCFLGEKLKKGELEDILKEIDINGDGSIDFDEFVMILSIR
SIO_010081: LOC111960380
subclass of: SO_0000673
so part of: LOC111960380
location: join(622310..622354,623365..623395,623756..623899,624696..624805,625240..625387,627093..627121)
location: region:622310-627121:1
so has part: feature:622310-622354:1:exon
so has part: feature:623365-623395:1:exon
so has part: feature:623756-623899:1:exon
so has part: feature:624696-624805:1:exon
so has part: feature:625240-625387:1:exon
so has part: feature:627093-627121:1:exon

XP_023838120.1
type: Protein
SIO_000068: ncbiprotein

position:622310:1
position: 622310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627121:1
position: 627121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622310-622354:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623365-623395:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623756-623899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:624696-624805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625240-625387:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627093-627121:1:exon

LOC111960380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 4
translation: MEKIHTTLLCSVFGAERELAQAELDELDFAFKEFDYDCDGYLNYKDVAECMRTMGYMPTEMELLEIVQQIKMRMGGLMDFDDFCELMGPRIMGETVDMLGLKELRSAFSQFDQDCDGKISQDEMKEAVKCFLGEKLKKGELEDILKEIDINGDGSIDFDEFVMILSIR
SIO_010081: LOC111960380
subclass of: SO_0000673
so part of: LOC111960380
location: join(622310..622354,623365..623395,623756..623899,624696..624805,625240..625387,627093..627121)
location: region:622310-627121:1
so has part: feature:622310-622354:1:exon
so has part: feature:623365-623395:1:exon
so has part: feature:623756-623899:1:exon
so has part: feature:624696-624805:1:exon
so has part: feature:625240-625387:1:exon
so has part: feature:627093-627121:1:exon

XP_023838121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622310-622354:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623365-623395:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623756-623899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:624696-624805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625240-625387:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627093-627121:1:exon

LOC111960123
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(631219..675352)
location: region:631219-675352:-1
so has part: feature:631219-675352:-1:exon
subclass of: SO_0000010

111960123
type: Gene
SIO_000068: ncbigene

position:631219:-1
position: 631219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675352:-1
position: 675352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631219-675352:-1:exon

LOC111960123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960123
product: tudor domain-containing protein 7B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982028.1
SIO_010081: LOC111960123
subclass of: SO_0000673
so part of: LOC111960123
location: complement(join(631219..631907,632812..632972,633249..633432,636805..637031,637195..637331,639916..640029,640166..640300,640958..641041,641599..641733,641998..642200,642341..642452,642653..642869,643114..643527,646146..646318,648185..648489,649080..649159,655037..655256,656133..656277,657043..657255,674930..675352))
location: region:631219-675352:-1
so has part: feature:674930-675352:-1:exon
so has part: feature:657043-657255:-1:exon
so has part: feature:656133-656277:-1:exon
so has part: feature:655037-655256:-1:exon
so has part: feature:649080-649159:-1:exon
so has part: feature:648185-648489:-1:exon
so has part: feature:646146-646318:-1:exon
so has part: feature:643114-643527:-1:exon
so has part: feature:642653-642869:-1:exon
so has part: feature:642341-642452:-1:exon
so has part: feature:641998-642200:-1:exon
so has part: feature:641599-641733:-1:exon
so has part: feature:640958-641041:-1:exon
so has part: feature:640166-640300:-1:exon
so has part: feature:639916-640029:-1:exon
so has part: feature:637195-637331:-1:exon
so has part: feature:636805-637031:-1:exon
so has part: feature:633249-633432:-1:exon
so has part: feature:632812-632972:-1:exon
so has part: feature:631219-631907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:674930-675352:-1:exon

position:674930:-1
position: 674930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:657043-657255:-1:exon

position:657043:-1
position: 657043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657255:-1
position: 657255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656133-656277:-1:exon

position:656133:-1
position: 656133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656277:-1
position: 656277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:655037-655256:-1:exon

position:655037:-1
position: 655037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655256:-1
position: 655256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:649080-649159:-1:exon

position:649080:-1
position: 649080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649159:-1
position: 649159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:648185-648489:-1:exon

position:648185:-1
position: 648185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648489:-1
position: 648489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:646146-646318:-1:exon

position:646146:-1
position: 646146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646318:-1
position: 646318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:643114-643527:-1:exon

position:643114:-1
position: 643114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643527:-1
position: 643527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:642653-642869:-1:exon

position:642653:-1
position: 642653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642869:-1
position: 642869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:642341-642452:-1:exon

position:642341:-1
position: 642341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642452:-1
position: 642452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:641998-642200:-1:exon

position:641998:-1
position: 641998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642200:-1
position: 642200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:641599-641733:-1:exon

position:641599:-1
position: 641599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641733:-1
position: 641733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:640958-641041:-1:exon

position:640958:-1
position: 640958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641041:-1
position: 641041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:640166-640300:-1:exon

position:640166:-1
position: 640166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640300:-1
position: 640300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:639916-640029:-1:exon

position:639916:-1
position: 639916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640029:-1
position: 640029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:637195-637331:-1:exon

position:637195:-1
position: 637195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637331:-1
position: 637331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:636805-637031:-1:exon

position:636805:-1
position: 636805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637031:-1
position: 637031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:633249-633432:-1:exon

position:633249:-1
position: 633249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633432:-1
position: 633432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:632812-632972:-1:exon

position:632812:-1
position: 632812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632972:-1
position: 632972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:631219-631907:-1:exon

position:631907:-1
position: 631907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tudor domain-containing protein 7B-like
translation: MEPQHVISSSSSPKSSSSAPCCIACIMTDVELMKRMLRAVLAANKSGPGVSLSRLQSEYKALTGEQIPHKQMGHASLDTLLHSIPSVVHMERNRTGEMVCFASVSSETAHVAKLVARQRTSKKTGRPQMVNCQMRVKPAAPLILNAKPRTSLRQPDHRGVVRGGGGGGRGLGGQHGDFRQGRDMRNTQSEGKSNQSSNQNKPINQNTPATRKSYVPFERSDKRMTLPSLFQKEVYTHFSRNTQSNPSTNFKENAVSGKPKPHHYPKDYNPSPGGNYNPQKVQGRIREVLNKYSNGFWVSKLPQLYRELYKQDLPSEAIKDLEHWTHICTVHTILVLYLYCCTVLNNTLRLAPASDGCGLSLRGRLTDVAGSARLLAGGVRALTARRCGGPLLELGSALELAGRLLSSAPPASPSTLSPDLRQKLGELLVKYSNGLWAHALPKLYLDTYKTKLPEHVLENLSLLSDFCTIEYPMPDNPKRAILYKRTREEENRNRRESVEECRAREEVGRRLSTQTVPPLLIPREEYPSVLVGEAANTNGVILRYIGEGYSQAQEALEDKMREFYCCQDNNTRTGDKKSGTPLASLTSGQLAAVRTEEDEEVLRAQVTEVMADKVKVYYVDHGFSEVISKAKVFELHEKFFNLPFQATKCQLAGLEPFYQEPAVLKKFESMASGKILLAEILERGQTPLVVLYDTSQDDDVNINAACIKALQDKTLASPLQVNSNYMNVTVRSVCSDGTIYCQLPSRGLAKLTEILEKAEAYFHSQVTSEFLVSRPFCGKGCLARYKGKWSRVEITNLHGSHVLDILFTDLGVQAAVEVIELREVPPPFLRDLISIPPQVVKCCLADLTVSGVGSWTPDAVQWFRDAVLNSTDCSVKIAKLDETKRSVAHVYLFPDKNFQDPARSLNRQMAASDLFKHRGDHCPSKTSTCTSTATLTSTPKTSTTTTTPSSNGTKPQLRCARSEPRPTGGTSTPPGTPPPPSSTTPIKLPLLLELPPAGHNMDIYVSVACHPGHFVVQPWRDMYKLVVLMEEMILYYNKTEEKPLKGEKNQIYAAKVENNWHRVLVKGVLTNGLMSVYELDYGKHELVSGTQLRPLIQEFRQLPFQGITAQLAGVKPRQWSEEASILFRNHVEKKPLVAQLEAVQEAHHPWDRKLTVFLVDTSQEEKDIWVHDIMVEFDDELTKEV
SIO_010081: LOC111960123
subclass of: SO_0000673
so part of: LOC111960123
location: complement(join(631687..631907,632812..632972,633249..633432,636805..637031,637195..637331,639916..640029,640166..640300,640958..641041,641599..641733,641998..642200,642341..642452,642653..642869,643114..643527,646146..646318,648185..648489,649080..649159,655037..655256,656133..656277,657043..657255,674930..675007))
location: region:631687-675007:-1
so has part: feature:674930-675007:-1:exon
so has part: feature:657043-657255:-1:exon
so has part: feature:656133-656277:-1:exon
so has part: feature:655037-655256:-1:exon
so has part: feature:649080-649159:-1:exon
so has part: feature:648185-648489:-1:exon
so has part: feature:646146-646318:-1:exon
so has part: feature:643114-643527:-1:exon
so has part: feature:642653-642869:-1:exon
so has part: feature:642341-642452:-1:exon
so has part: feature:641998-642200:-1:exon
so has part: feature:641599-641733:-1:exon
so has part: feature:640958-641041:-1:exon
so has part: feature:640166-640300:-1:exon
so has part: feature:639916-640029:-1:exon
so has part: feature:637195-637331:-1:exon
so has part: feature:636805-637031:-1:exon
so has part: feature:633249-633432:-1:exon
so has part: feature:632812-632972:-1:exon
so has part: feature:631687-631907:-1:exon

XP_023837796.1
type: Protein
SIO_000068: ncbiprotein

position:631687:-1
position: 631687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675007:-1
position: 675007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674930-675007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657043-657255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656133-656277:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655037-655256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649080-649159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:648185-648489:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:646146-646318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643114-643527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:642653-642869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:642341-642452:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641998-642200:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:641599-641733:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:640958-641041:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:640166-640300:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:639916-640029:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:637195-637331:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:636805-637031:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:633249-633432:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:632812-632972:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:631687-631907:-1:exon

LOC111960124
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 673463..714772
location: region:673463-714772:1
so has part: feature:673463-714772:1:exon
subclass of: SO_0000010

111960124
type: Gene
SIO_000068: ncbigene

position:673463:1
position: 673463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714772:1
position: 714772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673463-714772:1:exon

LOC111960124
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960124
product: dynactin subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982029.1
SIO_010081: LOC111960124
subclass of: SO_0000673
so part of: LOC111960124
location: join(673463..673625,676823..677077,677190..677268,678472..678503,678645..678662,679726..679749,680207..680260,682057..682212,683506..683586,683751..683867,684223..684427,685140..685218,685579..685738,693157..693261,693596..693787,694120..694236,694449..694601,694702..694868,695118..695286,695515..695583,695758..695814,702750..702893,703295..703456,707660..707791,708968..709093,709190..709332,709540..709706,709899..710029,710304..710508,713057..713130,713254..713343,713494..714772)
location: region:673463-714772:1
so has part: feature:673463-673625:1:exon
so has part: feature:676823-677077:1:exon
so has part: feature:677190-677268:1:exon
so has part: feature:678472-678503:1:exon
so has part: feature:678645-678662:1:exon
so has part: feature:679726-679749:1:exon
so has part: feature:680207-680260:1:exon
so has part: feature:682057-682212:1:exon
so has part: feature:683506-683586:1:exon
so has part: feature:683751-683867:1:exon
so has part: feature:684223-684427:1:exon
so has part: feature:685140-685218:1:exon
so has part: feature:685579-685738:1:exon
so has part: feature:693157-693261:1:exon
so has part: feature:693596-693787:1:exon
so has part: feature:694120-694236:1:exon
so has part: feature:694449-694601:1:exon
so has part: feature:694702-694868:1:exon
so has part: feature:695118-695286:1:exon
so has part: feature:695515-695583:1:exon
so has part: feature:695758-695814:1:exon
so has part: feature:702750-702893:1:exon
so has part: feature:703295-703456:1:exon
so has part: feature:707660-707791:1:exon
so has part: feature:708968-709093:1:exon
so has part: feature:709190-709332:1:exon
so has part: feature:709540-709706:1:exon
so has part: feature:709899-710029:1:exon
so has part: feature:710304-710508:1:exon
so has part: feature:713057-713130:1:exon
so has part: feature:713254-713343:1:exon
so has part: feature:713494-714772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673463-673625:1:exon

position:673625:1
position: 673625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:676823-677077:1:exon

position:676823:1
position: 676823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677077:1
position: 677077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:677190-677268:1:exon

position:677190:1
position: 677190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677268:1
position: 677268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:678472-678503:1:exon

position:678472:1
position: 678472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678503:1
position: 678503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:678645-678662:1:exon

position:678645:1
position: 678645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678662:1
position: 678662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:679726-679749:1:exon

position:679726:1
position: 679726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679749:1
position: 679749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:680207-680260:1:exon

position:680207:1
position: 680207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680260:1
position: 680260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:682057-682212:1:exon

position:682057:1
position: 682057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682212:1
position: 682212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:683506-683586:1:exon

position:683506:1
position: 683506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683586:1
position: 683586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:683751-683867:1:exon

position:683751:1
position: 683751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683867:1
position: 683867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:684223-684427:1:exon

position:684223:1
position: 684223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684427:1
position: 684427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:685140-685218:1:exon

position:685140:1
position: 685140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685218:1
position: 685218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:685579-685738:1:exon

position:685579:1
position: 685579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685738:1
position: 685738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:693157-693261:1:exon

position:693157:1
position: 693157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693261:1
position: 693261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:693596-693787:1:exon

position:693596:1
position: 693596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693787:1
position: 693787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:694120-694236:1:exon

position:694120:1
position: 694120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694236:1
position: 694236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:694449-694601:1:exon

position:694449:1
position: 694449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694601:1
position: 694601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:694702-694868:1:exon

position:694702:1
position: 694702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694868:1
position: 694868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:695118-695286:1:exon

position:695118:1
position: 695118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695286:1
position: 695286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:695515-695583:1:exon

position:695515:1
position: 695515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695583:1
position: 695583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:695758-695814:1:exon

position:695758:1
position: 695758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695814:1
position: 695814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:702750-702893:1:exon

position:702750:1
position: 702750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702893:1
position: 702893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:703295-703456:1:exon

position:703295:1
position: 703295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703456:1
position: 703456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:707660-707791:1:exon

position:707660:1
position: 707660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707791:1
position: 707791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:708968-709093:1:exon

position:708968:1
position: 708968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709093:1
position: 709093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:709190-709332:1:exon

position:709190:1
position: 709190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709332:1
position: 709332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:709540-709706:1:exon

position:709540:1
position: 709540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709706:1
position: 709706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:709899-710029:1:exon

position:709899:1
position: 709899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710029:1
position: 710029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:710304-710508:1:exon

position:710304:1
position: 710304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710508:1
position: 710508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:713057-713130:1:exon

position:713057:1
position: 713057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713130:1
position: 713130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:713254-713343:1:exon

position:713254:1
position: 713254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713343:1
position: 713343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:713494-714772:1:exon

position:713494:1
position: 713494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960124
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynactin subunit 1
translation: MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKRYFQCDENCGIFVRQSQIQLVEDGATSPDIPESSTAKFLSKQKDIPEVPKSVKQTPISKKSVTRRSTKWNTPGRLSSASSLPSLLMAPRAIGLSSSRSREDVSEGSLSSKGALGAPVVPLPSGIPTTSGAQTPATPSKEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKHKIQLEQLQEWKTKMQEQQTDLQKQLKEAKKDAREALEAKDRYMEEMADTADAIEMATLDKEMAEERSESLQVEVESLKEKVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKDALVRMRDLSSSEKQEHVKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQKRVEAAQETVADYQQTINKYRQLTASLQDANKELTSAQNANAEQVQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEKFDLNGNPVERTGVKMRGPPGEQLSFASGLVYSLTLLQATLHKYQQALNCCSVQVYTQMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLAEQTEDCTVQLADHIKVIQSVLDCMGAEGLPTLLTLCVCVCVYYLSLLFTFCSDIKQFCKKIRRRMPGTDVPGVPAALSFGSPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGLNALKLDDVAFKAVEQVYGSQGLNPHECLRQSCSAVISTMNKMATAHAEGEYDAERPQGKAPPVEARAAALRAEITDAEGLGVKLEDRDTVIKELKKLLKIKGEELSEAHVRLSLLEKKLDTSTKDADERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSSQSKSTIEGLRAPPASGIASIVTGSAGAALAPGAGGLSGPMQVVDSPLLRQQVEAQRLGIKHLKNENNRLKAEKMRAQLASLPPLHVPKLHLREATSSSSPPAEGPLHGALYRKTEQLLGTLLKMTATVKVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVAEHVVSQQPGAKVSSDFATFPISSFVKAKEGGTVFVGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLIA
SIO_010081: LOC111960124
subclass of: SO_0000673
so part of: LOC111960124
location: join(676850..677077,677190..677268,678472..678503,678645..678662,679726..679749,680207..680260,682057..682212,683506..683586,683751..683867,684223..684427,685140..685218,685579..685738,693157..693261,693596..693787,694120..694236,694449..694601,694702..694868,695118..695286,695515..695583,695758..695814,702750..702893,703295..703456,707660..707791,708968..709093,709190..709332,709540..709706,709899..710029,710304..710508,713057..713130,713254..713343,713494..713622)
location: region:676850-713622:1
so has part: feature:676850-677077:1:exon
so has part: feature:677190-677268:1:exon
so has part: feature:678472-678503:1:exon
so has part: feature:678645-678662:1:exon
so has part: feature:679726-679749:1:exon
so has part: feature:680207-680260:1:exon
so has part: feature:682057-682212:1:exon
so has part: feature:683506-683586:1:exon
so has part: feature:683751-683867:1:exon
so has part: feature:684223-684427:1:exon
so has part: feature:685140-685218:1:exon
so has part: feature:685579-685738:1:exon
so has part: feature:693157-693261:1:exon
so has part: feature:693596-693787:1:exon
so has part: feature:694120-694236:1:exon
so has part: feature:694449-694601:1:exon
so has part: feature:694702-694868:1:exon
so has part: feature:695118-695286:1:exon
so has part: feature:695515-695583:1:exon
so has part: feature:695758-695814:1:exon
so has part: feature:702750-702893:1:exon
so has part: feature:703295-703456:1:exon
so has part: feature:707660-707791:1:exon
so has part: feature:708968-709093:1:exon
so has part: feature:709190-709332:1:exon
so has part: feature:709540-709706:1:exon
so has part: feature:709899-710029:1:exon
so has part: feature:710304-710508:1:exon
so has part: feature:713057-713130:1:exon
so has part: feature:713254-713343:1:exon
so has part: feature:713494-713622:1:exon

XP_023837797.1
type: Protein
SIO_000068: ncbiprotein

position:676850:1
position: 676850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713622:1
position: 713622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676850-677077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677190-677268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678472-678503:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678645-678662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679726-679749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:680207-680260:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:682057-682212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:683506-683586:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683751-683867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684223-684427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685140-685218:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685579-685738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:693157-693261:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:693596-693787:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:694120-694236:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:694449-694601:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:694702-694868:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:695118-695286:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:695515-695583:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:695758-695814:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:702750-702893:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:703295-703456:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:707660-707791:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:708968-709093:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:709190-709332:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:709540-709706:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:709899-710029:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:710304-710508:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:713057-713130:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:713254-713343:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:713494-713622:1:exon

LOC111960009
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(738241..740312)
location: region:738241-740312:-1
so has part: feature:738241-740312:-1:exon
subclass of: SO_0000011

111960009
type: Gene
SIO_000068: ncbigene

position:738241:-1
position: 738241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740312:-1
position: 740312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738241-740312:-1:exon

LOC111960009
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960009
product: uncharacterized LOC111960009
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_002876752.2
SIO_010081: LOC111960009
subclass of: SO_0000673
so part of: LOC111960009
location: complement(join(738241..739337,739576..739646,739808..740312))
location: region:738241-740312:-1
so has part: feature:739808-740312:-1:exon
so has part: feature:739576-739646:-1:exon
so has part: feature:738241-739337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:739808-740312:-1:exon

position:739808:-1
position: 739808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:739576-739646:-1:exon

position:739576:-1
position: 739576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739646:-1
position: 739646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:738241-739337:-1:exon

position:739337:-1
position: 739337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960010
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(741005..743345)
location: region:741005-743345:-1
so has part: feature:741005-743345:-1:exon
subclass of: SO_0000010

111960010
type: Gene
SIO_000068: ncbigene

position:741005:-1
position: 741005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743345:-1
position: 743345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741005-743345:-1:exon

LOC111960010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960010
product: putative ferric-chelate reductase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_024134949.1
SIO_010081: LOC111960010
subclass of: SO_0000673
so part of: LOC111960010
location: complement(join(741005..741822,742732..742865,743211..743345))
location: region:741005-743345:-1
so has part: feature:743211-743345:-1:exon
so has part: feature:742732-742865:-1:exon
so has part: feature:741005-741822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743211-743345:-1:exon

position:743211:-1
position: 743211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:742732-742865:-1:exon

position:742732:-1
position: 742732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742865:-1
position: 742865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:741005-741822:-1:exon

position:741822:-1
position: 741822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960010
product: putative ferric-chelate reductase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023981876.1
SIO_010081: LOC111960010
subclass of: SO_0000673
so part of: LOC111960010
location: complement(join(741005..741822,742349..742446,742732..742865,743211..743345))
location: region:741005-743345:-1
so has part: feature:743211-743345:-1:exon
so has part: feature:742732-742865:-1:exon
so has part: feature:742349-742446:-1:exon
so has part: feature:741005-741822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743211-743345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742732-742865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742349-742446:-1:exon

position:742349:-1
position: 742349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742446:-1
position: 742446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:741005-741822:-1:exon

LOC111960010
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8036
gene: LOC111960010
product: putative ferric-chelate reductase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002893492.1
SIO_010081: LOC111960010
so part of: LOC111960010
location: complement(join(741005..741822,742338..742446,742732..742865,743211..743345))
location: region:741005-743345:-1
so has part: feature:743211-743345:-1:exon
so has part: feature:742732-742865:-1:exon
so has part: feature:742338-742446:-1:exon
so has part: feature:741005-741822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743211-743345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742732-742865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742338-742446:-1:exon

position:742338:-1
position: 742338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:741005-741822:-1:exon

LOC111960010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ferric-chelate reductase 1 isoform X1
translation: MLPGNSFHGNTGQSSSSPYTVTVNQTTYQPGDTIQVNLSGTITYKGFLLEAHEEGQNTAVGTFSLGSGTGIVLVPCNGITASGVSQSNNQAKSSVTVTWTAPASASLGNIVVKTTFMQTSRLFWIAVPSMTVKPTSSVVNTIGAPTTAPTPTTTAPTTTTTTTAPNTTTTTTASATTTTASNTTTTTTASTPTTTTTASNTTTTTTAPTPTTTAPTPTTTTTAPTRQPQLQLLLRQPQLLIQQPQLQLLLRQPQLQLLIRQPQPQLLLRQPQLLLRQPQLQLLPDNHNYSFCYDNHSF
SIO_010081: LOC111960010
subclass of: SO_0000673
so part of: LOC111960010
location: complement(join(741264..741822,742349..742446,742732..742865,743211..743316))
location: region:741264-743316:-1
so has part: feature:743211-743316:-1:exon
so has part: feature:742732-742865:-1:exon
so has part: feature:742349-742446:-1:exon
so has part: feature:741264-741822:-1:exon

XP_023837644.1
type: Protein
SIO_000068: ncbiprotein

position:741264:-1
position: 741264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743316:-1
position: 743316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743211-743316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742732-742865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742349-742446:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741264-741822:-1:exon

LOC111960010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ferric-chelate reductase 1 isoform X2
translation: MLPGNSFHGNTGQSSSSPYTVTVNQTTYQPGDTIQVNLSGTITYKGFLLEAHEEGQNTAVGTFSLGSGTGIVLVPCNGITDNIYADLQVILDCSA
SIO_010081: LOC111960010
subclass of: SO_0000673
so part of: LOC111960010
location: complement(join(741775..741822,742732..742865,743211..743316))
location: region:741775-743316:-1
so has part: feature:743211-743316:-1:exon
so has part: feature:742732-742865:-1:exon
so has part: feature:741775-741822:-1:exon

XP_023990717.1
type: Protein
SIO_000068: ncbiprotein

position:741775:-1
position: 741775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743211-743316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742732-742865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741775-741822:-1:exon

LOC112067973
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(747170..753915)
location: region:747170-753915:-1
so has part: feature:747170-753915:-1:exon
subclass of: SO_0000011

112067973
type: Gene
SIO_000068: ncbigene

position:747170:-1
position: 747170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753915:-1
position: 753915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747170-753915:-1:exon

LOC112067973
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC112067973
product: uncharacterized LOC112067973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002893493.1
SIO_010081: LOC112067973
subclass of: SO_0000673
so part of: LOC112067973
location: complement(join(747170..747203,752256..752389,752993..753241,753787..753915))
location: region:747170-753915:-1
so has part: feature:753787-753915:-1:exon
so has part: feature:752993-753241:-1:exon
so has part: feature:752256-752389:-1:exon
so has part: feature:747170-747203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753787-753915:-1:exon

position:753787:-1
position: 753787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752993-753241:-1:exon

position:752993:-1
position: 752993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753241:-1
position: 753241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:752256-752389:-1:exon

position:752256:-1
position: 752256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752389:-1
position: 752389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747170-747203:-1:exon

position:747203:-1
position: 747203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960410
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960410
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(770238..770967)
location: region:770238-770967:-1
so has part: feature:770238-770967:-1:exon
subclass of: SO_0000011

111960410
type: Gene
SIO_000068: ncbigene

position:770238:-1
position: 770238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770967:-1
position: 770967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770238-770967:-1:exon

LOC111960410
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960410
product: uncharacterized LOC111960410
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002876835.1
SIO_010081: LOC111960410
subclass of: SO_0000673
so part of: LOC111960410
location: complement(join(770238..770328,770563..770633,770795..770967))
location: region:770238-770967:-1
so has part: feature:770795-770967:-1:exon
so has part: feature:770563-770633:-1:exon
so has part: feature:770238-770328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770795-770967:-1:exon

position:770795:-1
position: 770795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770563-770633:-1:exon

position:770563:-1
position: 770563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770633:-1
position: 770633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:770238-770328:-1:exon

position:770328:-1
position: 770328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960409
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 779550..787476
location: region:779550-787476:1
so has part: feature:779550-787476:1:exon
subclass of: SO_0000010

111960409
type: Gene
SIO_000068: ncbigene

position:779550:1
position: 779550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787476:1
position: 787476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779550-787476:1:exon

LOC111960409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960409
product: putative ferric-chelate reductase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_023982399.2
SIO_010081: LOC111960409
subclass of: SO_0000673
so part of: LOC111960409
location: join(779550..779664,780401..780561,782306..782497,782702..782800,783163..783304,783517..783642,784834..784881,787364..787476)
location: region:779550-787476:1
so has part: feature:779550-779664:1:exon
so has part: feature:780401-780561:1:exon
so has part: feature:782306-782497:1:exon
so has part: feature:782702-782800:1:exon
so has part: feature:783163-783304:1:exon
so has part: feature:783517-783642:1:exon
so has part: feature:784834-784881:1:exon
so has part: feature:787364-787476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779550-779664:1:exon

position:779664:1
position: 779664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:780401-780561:1:exon

position:780401:1
position: 780401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780561:1
position: 780561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:782306-782497:1:exon

position:782306:1
position: 782306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782497:1
position: 782497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782702-782800:1:exon

position:782702:1
position: 782702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782800:1
position: 782800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:783163-783304:1:exon

position:783163:1
position: 783163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783304:1
position: 783304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:783517-783642:1:exon

position:783517:1
position: 783517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783642:1
position: 783642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:784834-784881:1:exon

position:784834:1
position: 784834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784881:1
position: 784881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:787364-787476:1:exon

position:787364:1
position: 787364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960409
product: putative ferric-chelate reductase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023982398.2
SIO_010081: LOC111960409
subclass of: SO_0000673
so part of: LOC111960409
location: join(779552..779658,780401..780561,782306..782497,782702..782800,783163..783304,783517..783642,784834..785575)
location: region:779552-785575:1
so has part: feature:779552-779658:1:exon
so has part: feature:780401-780561:1:exon
so has part: feature:782306-782497:1:exon
so has part: feature:782702-782800:1:exon
so has part: feature:783163-783304:1:exon
so has part: feature:783517-783642:1:exon
so has part: feature:784834-785575:1:exon

position:779552:1
position: 779552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785575:1
position: 785575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779552-779658:1:exon

position:779658:1
position: 779658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:780401-780561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782306-782497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782702-782800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783163-783304:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783517-783642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:784834-785575:1:exon

LOC111960409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960409
product: putative ferric-chelate reductase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023982396.2
SIO_010081: LOC111960409
subclass of: SO_0000673
so part of: LOC111960409
location: join(779553..779664,780401..780561,782306..782497,782702..782800,783163..783304,783517..783642,784834..785575)
location: region:779553-785575:1
so has part: feature:779553-779664:1:exon
so has part: feature:780401-780561:1:exon
so has part: feature:782306-782497:1:exon
so has part: feature:782702-782800:1:exon
so has part: feature:783163-783304:1:exon
so has part: feature:783517-783642:1:exon
so has part: feature:784834-785575:1:exon

position:779553:1
position: 779553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779553-779664:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780401-780561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782306-782497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782702-782800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783163-783304:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783517-783642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:784834-785575:1:exon

LOC111960409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960409
product: putative ferric-chelate reductase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_023982397.2
SIO_010081: LOC111960409
subclass of: SO_0000673
so part of: LOC111960409
location: join(779985..780029,780401..780561,782306..782497,782702..782800,783163..783304,783517..783642,784834..785575)
location: region:779985-785575:1
so has part: feature:779985-780029:1:exon
so has part: feature:780401-780561:1:exon
so has part: feature:782306-782497:1:exon
so has part: feature:782702-782800:1:exon
so has part: feature:783163-783304:1:exon
so has part: feature:783517-783642:1:exon
so has part: feature:784834-785575:1:exon

position:779985:1
position: 779985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779985-780029:1:exon

position:780029:1
position: 780029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:780401-780561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782306-782497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782702-782800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783163-783304:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783517-783642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:784834-785575:1:exon

LOC111960409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ferric-chelate reductase 1
translation: MDNISRLMFAVVMAMAYMAMGAEAQNTTMDPNSTMASNVTTAPVVNTTATAPTVEILTAECGNSQLCASEPSECNPALAGSCFFISTQQTSGQNISFQLRGVSSGYIAVGLSTDNKQGGNDTTYVCANNNGKVKFFTALLDNTVLTIISTLPVNSVKGSVNGQIIQCTFSATVPKATVTRSPNTSFYLSISNGTFMNDTLGSPKNFLFSKEAVDLADPNAKVTNSLNSAPSGHAFGLSQALLILLGVMML
SIO_010081: LOC111960409
subclass of: SO_0000673
so part of: LOC111960409
location: join(780403..780561,782306..782497,782702..782800,783163..783304,783517..783642,784834..784868)
location: region:780403-784868:1
so has part: feature:780403-780561:1:exon
so has part: feature:782306-782497:1:exon
so has part: feature:782702-782800:1:exon
so has part: feature:783163-783304:1:exon
so has part: feature:783517-783642:1:exon
so has part: feature:784834-784868:1:exon

XP_023838164.1
type: Protein
SIO_000068: ncbiprotein

position:780403:1
position: 780403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784868:1
position: 784868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780403-780561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782306-782497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782702-782800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783163-783304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783517-783642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:784834-784868:1:exon

LOC111960409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ferric-chelate reductase 1
translation: MDNISRLMFAVVMAMAYMAMGAEAQNTTMDPNSTMASNVTTAPVVNTTATAPTVEILTAECGNSQLCASEPSECNPALAGSCFFISTQQTSGQNISFQLRGVSSGYIAVGLSTDNKQGGNDTTYVCANNNGKVKFFTALLDNTVLTIISTLPVNSVKGSVNGQIIQCTFSATVPKATVTRSPNTSFYLSISNGTFMNDTLGSPKNFLFSKEAVDLADPNAKVTNSLNSAPSGHAFGLSQALLILLGVMML
SIO_010081: LOC111960409
subclass of: SO_0000673
so part of: LOC111960409
location: join(780403..780561,782306..782497,782702..782800,783163..783304,783517..783642,784834..784868)
location: region:780403-784868:1
so has part: feature:780403-780561:1:exon
so has part: feature:782306-782497:1:exon
so has part: feature:782702-782800:1:exon
so has part: feature:783163-783304:1:exon
so has part: feature:783517-783642:1:exon
so has part: feature:784834-784868:1:exon

XP_023838165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:780403-780561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782306-782497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782702-782800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783163-783304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783517-783642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:784834-784868:1:exon

LOC111960409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ferric-chelate reductase 1
translation: MDNISRLMFAVVMAMAYMAMGAEAQNTTMDPNSTMASNVTTAPVVNTTATAPTVEILTAECGNSQLCASEPSECNPALAGSCFFISTQQTSGQNISFQLRGVSSGYIAVGLSTDNKQGGNDTTYVCANNNGKVKFFTALLDNTVLTIISTLPVNSVKGSVNGQIIQCTFSATVPKATVTRSPNTSFYLSISNGTFMNDTLGSPKNFLFSKEAVDLADPNAKVTNSLNSAPSGHAFGLSQALLILLGVMML
SIO_010081: LOC111960409
subclass of: SO_0000673
so part of: LOC111960409
location: join(780403..780561,782306..782497,782702..782800,783163..783304,783517..783642,784834..784868)
location: region:780403-784868:1
so has part: feature:780403-780561:1:exon
so has part: feature:782306-782497:1:exon
so has part: feature:782702-782800:1:exon
so has part: feature:783163-783304:1:exon
so has part: feature:783517-783642:1:exon
so has part: feature:784834-784868:1:exon

XP_023838166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:780403-780561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782306-782497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782702-782800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783163-783304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783517-783642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:784834-784868:1:exon

LOC111960409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ferric-chelate reductase 1
translation: MDNISRLMFAVVMAMAYMAMGAEAQNTTMDPNSTMASNVTTAPVVNTTATAPTVEILTAECGNSQLCASEPSECNPALAGSCFFISTQQTSGQNISFQLRGVSSGYIAVGLSTDNKQGGNDTTYVCANNNGKVKFFTALLDNTVLTIISTLPVNSVKGSVNGQIIQCTFSATVPKATVTRSPNTSFYLSISNGTFMNDTLGSPKNFLFSKEAVDLADPNAKVTNSLNSAPSGHAFGLSQALLILLGVMML
SIO_010081: LOC111960409
subclass of: SO_0000673
so part of: LOC111960409
location: join(780403..780561,782306..782497,782702..782800,783163..783304,783517..783642,784834..784868)
location: region:780403-784868:1
so has part: feature:780403-780561:1:exon
so has part: feature:782306-782497:1:exon
so has part: feature:782702-782800:1:exon
so has part: feature:783163-783304:1:exon
so has part: feature:783517-783642:1:exon
so has part: feature:784834-784868:1:exon

XP_023838167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:780403-780561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782306-782497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782702-782800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783163-783304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783517-783642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:784834-784868:1:exon

LOC111960364
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 840668..850494
location: region:840668-850494:1
so has part: feature:840668-850494:1:exon
subclass of: SO_0000011

111960364
type: Gene
SIO_000068: ncbigene

position:840668:1
position: 840668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850494:1
position: 850494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840668-850494:1:exon

LOC111960364
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960364
product: uncharacterized LOC111960364, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002876822.1
SIO_010081: LOC111960364
subclass of: SO_0000673
so part of: LOC111960364
location: join(840668..840803,841972..842003,842092..842151,842340..842403,844031..844115,848403..848479,849418..850494)
location: region:840668-850494:1
so has part: feature:840668-840803:1:exon
so has part: feature:841972-842003:1:exon
so has part: feature:842092-842151:1:exon
so has part: feature:842340-842403:1:exon
so has part: feature:844031-844115:1:exon
so has part: feature:848403-848479:1:exon
so has part: feature:849418-850494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840668-840803:1:exon

position:840803:1
position: 840803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841972-842003:1:exon

position:841972:1
position: 841972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842003:1
position: 842003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:842092-842151:1:exon

position:842092:1
position: 842092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842151:1
position: 842151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:842340-842403:1:exon

position:842340:1
position: 842340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842403:1
position: 842403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:844031-844115:1:exon

position:844031:1
position: 844031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844115:1
position: 844115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:848403-848479:1:exon

position:848403:1
position: 848403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848479:1
position: 848479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:849418-850494:1:exon

position:849418:1
position: 849418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960364
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960364
product: uncharacterized LOC111960364, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002876823.1
SIO_010081: LOC111960364
subclass of: SO_0000673
so part of: LOC111960364
location: join(840668..840803,841972..842003,842095..842151,842340..842403,844031..844115,848403..848479,849418..850494)
location: region:840668-850494:1
so has part: feature:840668-840803:1:exon
so has part: feature:841972-842003:1:exon
so has part: feature:842095-842151:1:exon
so has part: feature:842340-842403:1:exon
so has part: feature:844031-844115:1:exon
so has part: feature:848403-848479:1:exon
so has part: feature:849418-850494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840668-840803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841972-842003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842095-842151:1:exon

position:842095:1
position: 842095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:842340-842403:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:844031-844115:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848403-848479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849418-850494:1:exon

LOC111960354
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 850813..853701
location: region:850813-853701:1
so has part: feature:850813-853701:1:exon
subclass of: SO_0000010

111960354
type: Gene
SIO_000068: ncbigene

position:850813:1
position: 850813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853701:1
position: 853701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850813-853701:1:exon

LOC111960354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960354
product: ubiquitin carboxyl-terminal hydrolase CYLD
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_023982325.1
SIO_010081: LOC111960354
subclass of: SO_0000673
so part of: LOC111960354
location: join(850813..850906,851499..851722,852285..852560,852778..853155,853364..853701)
location: region:850813-853701:1
so has part: feature:850813-850906:1:exon
so has part: feature:851499-851722:1:exon
so has part: feature:852285-852560:1:exon
so has part: feature:852778-853155:1:exon
so has part: feature:853364-853701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850813-850906:1:exon

position:850906:1
position: 850906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:851499-851722:1:exon

position:851499:1
position: 851499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851722:1
position: 851722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:852285-852560:1:exon

position:852285:1
position: 852285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852560:1
position: 852560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:852778-853155:1:exon

position:852778:1
position: 852778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853155:1
position: 853155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:853364-853701:1:exon

position:853364:1
position: 853364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase CYLD
translation: MSGAQEYKRRQPPKMYLVVSNLKIQDQLEGTIRLLRGNLCQEQEGGRSRGDQLWVKVLDYGCMVKIDKQLLKEVPTDLTGLLEPVSDPESRLNLLINPKQLYRLAALPLGTPLYVQMGQPGELAEAELRYRGPLTRGSTAVLFGVQLKDSAVGRGNSNGSYKGHQLFTCPEASALFLPANQIRLRRWSRANDDYHNNALPPQPQPLIGNIIARTAESSPSLAPVLARNPSSPPPLQVGHRVCFPLEDTVHGGEVRFCGVLPGRTSTGVFVGILLDNAVGNWDGSYKGEKLCSISSSLYGCLLPISKVSPGTSLPGSNVTADQRSCLVCC
SIO_010081: LOC111960354
subclass of: SO_0000673
so part of: LOC111960354
location: join(851555..851722,852285..852560,852778..853155,853364..853531)
location: region:851555-853531:1
so has part: feature:851555-851722:1:exon
so has part: feature:852285-852560:1:exon
so has part: feature:852778-853155:1:exon
so has part: feature:853364-853531:1:exon

XP_023838093.1
type: Protein
SIO_000068: ncbiprotein

position:851555:1
position: 851555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853531:1
position: 853531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851555-851722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852285-852560:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:852778-853155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:853364-853531:1:exon

LOC111960353
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 861777..873622
location: region:861777-873622:1
so has part: feature:861777-873622:1:exon
subclass of: SO_0000010

111960353
type: Gene
SIO_000068: ncbigene

position:861777:1
position: 861777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873622:1
position: 873622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861777-873622:1:exon

LOC111960353
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960353
product: ubiquitin carboxyl-terminal hydrolase CYLD
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023982324.1
SIO_010081: LOC111960353
subclass of: SO_0000673
so part of: LOC111960353
location: join(861777..861942,862415..862537,862749..862840,864052..864115,864280..864487,864569..864677,872748..872866,873004..873211,873432..873622)
location: region:861777-873622:1
so has part: feature:861777-861942:1:exon
so has part: feature:862415-862537:1:exon
so has part: feature:862749-862840:1:exon
so has part: feature:864052-864115:1:exon
so has part: feature:864280-864487:1:exon
so has part: feature:864569-864677:1:exon
so has part: feature:872748-872866:1:exon
so has part: feature:873004-873211:1:exon
so has part: feature:873432-873622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:861777-861942:1:exon

position:861942:1
position: 861942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:862415-862537:1:exon

position:862415:1
position: 862415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862537:1
position: 862537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862749-862840:1:exon

position:862749:1
position: 862749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862840:1
position: 862840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:864052-864115:1:exon

position:864052:1
position: 864052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864115:1
position: 864115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864280-864487:1:exon

position:864280:1
position: 864280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864487:1
position: 864487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:864569-864677:1:exon

position:864569:1
position: 864569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864677:1
position: 864677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:872748-872866:1:exon

position:872748:1
position: 872748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872866:1
position: 872866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:873004-873211:1:exon

position:873004:1
position: 873004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873211:1
position: 873211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:873432-873622:1:exon

position:873432:1
position: 873432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960353
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase CYLD
translation: MYQGWKRGIQGHLNSCYLDASLFSLFSCCSSVDWVLLWPSNPSDGPHCSQAQDLLRCEIVNPLRRFGYVCASKTMALRRLLEAESSDTGFTNQEKDPEEFLNKLFQLLRVEPLLKIRSVTQKQQPQECHLYQLFPPSVPLCPSSPVPLSPSLCPIPLSSPAVLMRVANVQTLLETSFLHAGLKFAEAPSCLPLLMPRFGKDFKMFDAILPSLTIDITDLLDDTLRQCSICQAVAEWECLECYEDLDITPGHLKQYCHTCNTQVHIHKKRQSHSPCQVGVAGGPWTGPLHGTRQRLALFAVTCIETSHYVSFVKHGPRPDDWLFFDSMADREGGENGFNIPQVRACPEVGRYLSLSAEELGRLDPASLRESARRLLCDSYMCLYHSPELSLYK
SIO_010081: LOC111960353
subclass of: SO_0000673
so part of: LOC111960353
location: join(861872..861942,862415..862537,862749..862840,864052..864115,864280..864487,864569..864677,872748..872866,873004..873211,873432..873616)
location: region:861872-873616:1
so has part: feature:861872-861942:1:exon
so has part: feature:862415-862537:1:exon
so has part: feature:862749-862840:1:exon
so has part: feature:864052-864115:1:exon
so has part: feature:864280-864487:1:exon
so has part: feature:864569-864677:1:exon
so has part: feature:872748-872866:1:exon
so has part: feature:873004-873211:1:exon
so has part: feature:873432-873616:1:exon

XP_023838092.1
type: Protein
SIO_000068: ncbiprotein

position:861872:1
position: 861872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873616:1
position: 873616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861872-861942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862415-862537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862749-862840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864052-864115:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864280-864487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:864569-864677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872748-872866:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873004-873211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873432-873616:1:exon

LOC111960000
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 875401..882618
location: region:875401-882618:1
so has part: feature:875401-882618:1:exon
subclass of: SO_0000010

111960000
type: Gene
SIO_000068: ncbigene

position:875401:1
position: 875401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882618:1
position: 882618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875401-882618:1:exon

LOC111960000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960000
product: ER membrane protein complex subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_023981836.1
SIO_010081: LOC111960000
subclass of: SO_0000673
so part of: LOC111960000
location: join(875401..875676,876332..876478,876750..876864,877345..877498,881965..882125,882265..882618)
location: region:875401-882618:1
so has part: feature:875401-875676:1:exon
so has part: feature:876332-876478:1:exon
so has part: feature:876750-876864:1:exon
so has part: feature:877345-877498:1:exon
so has part: feature:881965-882125:1:exon
so has part: feature:882265-882618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875401-875676:1:exon

position:875676:1
position: 875676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876332-876478:1:exon

position:876332:1
position: 876332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876478:1
position: 876478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:876750-876864:1:exon

position:876750:1
position: 876750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876864:1
position: 876864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:877345-877498:1:exon

position:877345:1
position: 877345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877498:1
position: 877498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:881965-882125:1:exon

position:881965:1
position: 881965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882125:1
position: 882125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:882265-882618:1:exon

position:882265:1
position: 882265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 4
translation: MATPEGQGGGALSTRGGARRMKWALELTLGNARGRGDRQSNQGYVMYPIGYSDKPVPDTSIQESDKNLVEKRCWDVALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLENSNQQWLQGLVYSVGNLLGSALAIYKCQSMGLLPTHSSDWLAFIEPPMRMEIMGGGMVL
SIO_010081: LOC111960000
subclass of: SO_0000673
so part of: LOC111960000
location: join(876381..876478,876750..876864,877345..877498,881965..882125,882265..882300)
location: region:876381-882300:1
so has part: feature:876381-876478:1:exon
so has part: feature:876750-876864:1:exon
so has part: feature:877345-877498:1:exon
so has part: feature:881965-882125:1:exon
so has part: feature:882265-882300:1:exon

XP_023837604.1
type: Protein
SIO_000068: ncbiprotein

position:876381:1
position: 876381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882300:1
position: 882300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876381-876478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876750-876864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877345-877498:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:881965-882125:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:882265-882300:1:exon

LOC111960403
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 883789..888055
location: region:883789-888055:1
so has part: feature:883789-888055:1:exon
subclass of: SO_0000011

111960403
type: Gene
SIO_000068: ncbigene

position:883789:1
position: 883789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888055:1
position: 888055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883789-888055:1:exon

LOC111960403
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960403
product: uncharacterized LOC111960403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002876834.2
SIO_010081: LOC111960403
subclass of: SO_0000673
so part of: LOC111960403
location: join(883789..883969,884087..884188,884822..884918,887424..888055)
location: region:883789-888055:1
so has part: feature:883789-883969:1:exon
so has part: feature:884087-884188:1:exon
so has part: feature:884822-884918:1:exon
so has part: feature:887424-888055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:883789-883969:1:exon

position:883969:1
position: 883969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884087-884188:1:exon

position:884087:1
position: 884087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884188:1
position: 884188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884822-884918:1:exon

position:884822:1
position: 884822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884918:1
position: 884918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:887424-888055:1:exon

position:887424:1
position: 887424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960366
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 895345..929019
location: region:895345-929019:1
so has part: feature:895345-929019:1:exon

111960366
type: Gene
SIO_000068: ncbigene

position:895345:1
position: 895345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929019:1
position: 929019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895345-929019:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 895345..895857
location: region:895345-895857:1
so has part: feature:895345-895857:1:exon

position:895857:1
position: 895857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895345-895857:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 897970..898333
location: region:897970-898333:1
so has part: feature:897970-898333:1:exon

position:897970:1
position: 897970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898333:1
position: 898333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897970-898333:1:exon

LOC111960370
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 902395..905263
location: region:902395-905263:1
so has part: feature:902395-905263:1:exon
subclass of: SO_0000011

111960370
type: Gene
SIO_000068: ncbigene

position:902395:1
position: 902395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905263:1
position: 905263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902395-905263:1:exon

LOC111960370
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960370
product: uncharacterized LOC111960370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_002876826.1
SIO_010081: LOC111960370
subclass of: SO_0000673
so part of: LOC111960370
location: join(902395..902450,903254..903288,905243..905263)
location: region:902395-905263:1
so has part: feature:902395-902450:1:exon
so has part: feature:903254-903288:1:exon
so has part: feature:905243-905263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902395-902450:1:exon

position:902450:1
position: 902450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:903254-903288:1:exon

position:903254:1
position: 903254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903288:1
position: 903288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:905243-905263:1:exon

position:905243:1
position: 905243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960369
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 905408..905705
location: region:905408-905705:1
so has part: feature:905408-905705:1:exon
subclass of: SO_0000011

111960369
type: Gene
SIO_000068: ncbigene

position:905408:1
position: 905408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905705:1
position: 905705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905408-905705:1:exon

LOC111960369
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960369
product: uncharacterized LOC111960369
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XR_002876825.1
SIO_010081: LOC111960369
subclass of: SO_0000673
so part of: LOC111960369
location: join(905408..905487,905661..905705)
location: region:905408-905705:1
so has part: feature:905408-905487:1:exon
so has part: feature:905661-905705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905408-905487:1:exon

position:905487:1
position: 905487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:905661-905705:1:exon

position:905661:1
position: 905661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960368
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(910180..914094)
location: region:910180-914094:-1
so has part: feature:910180-914094:-1:exon
subclass of: SO_0000011

111960368
type: Gene
SIO_000068: ncbigene

position:910180:-1
position: 910180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914094:-1
position: 914094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910180-914094:-1:exon

LOC111960368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960368
product: uncharacterized LOC111960368
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_002876824.1
SIO_010081: LOC111960368
subclass of: SO_0000673
so part of: LOC111960368
location: complement(join(910180..910358,912319..912353,913149..913207,913513..913573,914059..914094))
location: region:910180-914094:-1
so has part: feature:914059-914094:-1:exon
so has part: feature:913513-913573:-1:exon
so has part: feature:913149-913207:-1:exon
so has part: feature:912319-912353:-1:exon
so has part: feature:910180-910358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914059-914094:-1:exon

position:914059:-1
position: 914059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913513-913573:-1:exon

position:913513:-1
position: 913513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913573:-1
position: 913573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:913149-913207:-1:exon

position:913149:-1
position: 913149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913207:-1
position: 913207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:912319-912353:-1:exon

position:912319:-1
position: 912319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912353:-1
position: 912353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:910180-910358:-1:exon

position:910358:-1
position: 910358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 920569..920681
location: region:920569-920681:1
so has part: feature:920569-920681:1:exon

position:920569:1
position: 920569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920681:1
position: 920681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920569-920681:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 921167..921227
location: region:921167-921227:1
so has part: feature:921167-921227:1:exon

position:921167:1
position: 921167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921227:1
position: 921227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921167-921227:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 921535..921593
location: region:921535-921593:1
so has part: feature:921535-921593:1:exon

position:921535:1
position: 921535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921593:1
position: 921593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921535-921593:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 922395..922429
location: region:922395-922429:1
so has part: feature:922395-922429:1:exon

position:922395:1
position: 922395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922429:1
position: 922429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922395-922429:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 924400..924454
location: region:924400-924454:1
so has part: feature:924400-924454:1:exon

position:924400:1
position: 924400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924454:1
position: 924454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924400-924454:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 924564..924649
location: region:924564-924649:1
so has part: feature:924564-924649:1:exon

position:924564:1
position: 924564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924649:1
position: 924649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924564-924649:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 924820..924951
location: region:924820-924951:1
so has part: feature:924820-924951:1:exon

position:924820:1
position: 924820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924951:1
position: 924951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924820-924951:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 926867..927020
location: region:926867-927020:1
so has part: feature:926867-927020:1:exon

position:926867:1
position: 926867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927020:1
position: 927020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926867-927020:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 927196..927288
location: region:927196-927288:1
so has part: feature:927196-927288:1:exon

position:927196:1
position: 927196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927288:1
position: 927288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927196-927288:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 927687..927822
location: region:927687-927822:1
so has part: feature:927687-927822:1:exon

position:927687:1
position: 927687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927822:1
position: 927822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927687-927822:1:exon

LOC111960366
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960366
subclass of: SO_0000673
so part of: LOC111960366
location: 928188..929019
location: region:928188-929019:1
so has part: feature:928188-929019:1:exon

position:928188:1
position: 928188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928188-929019:1:exon

LOC111960365
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(929013..931397)
location: region:929013-931397:-1
so has part: feature:929013-931397:-1:exon
subclass of: SO_0000010

111960365
type: Gene
SIO_000068: ncbigene

position:929013:-1
position: 929013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931397:-1
position: 931397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929013-931397:-1:exon

LOC111960365
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960365
product: trichohyalin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982342.1
SIO_010081: LOC111960365
subclass of: SO_0000673
so part of: LOC111960365
location: complement(929013..931397)
location: region:929013-931397:-1
so has part: feature:929013-931397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:929013-931397:-1:exon

LOC111960365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trichohyalin-like
translation: MERKEIKQQKRETESEVETTQSGQRADADRENTEMREREEVEERMKERNEIVGRLETSKANPSRNSKRSTRHQKQRESRRRKDTMKTEEGKKEIENEKEVVKKTEKMETREVAVREEEEGEVIATENKMEEKTEKKKQRQSRKGRERQAVNREQAEEKEQRSDKEVQTEFKAATAPNINTDKVKLTLKEPQQHQGQKTEADRDTLKQWDGAKDKTQKPSTMTGPMIRARRSSKAAEKGKEESSKTAKKETEKEKEDEAKRTEKPRVIPSPMITTRRKSKATEKEKPKTGNTMNKVTSVETDEEEDEGKEQRSERPSPLTPVTRKKIKDTEGKKEGKPNTKKETGGEKEKQSDEVEERTENPCRMTSTATSRMITRGNWRAEECKKEQIPSMAKKVVMATTPNIYTDKERKEGGREEREDVPTSGKVTLKELSPMTRTKWGKNDVERKDEELSTANMEIDGEMEKKGREKIAKPSLRSPVTRARRKDEPKPAEKETGKQGNETKEERTEKSFPIPSPMTRTRHAKAVMGRKEQKEESTNTAEKETGKQRDKVEEQVTDNLKSKTSEGEGTIENDAFVTNRGLNRKGMKRKAGESGDTVGKEERQVVFQSKEGSHLGLKKLKSKNRRGLTEESTSSTKAKIEKVETNAKITGNRGTTEKREVKTIPASRTKHSEGKREIETVLSPVTEWRTGKTEGGKSKGETIHPPIPAKLSKVEEDEPTQAEGHTSDEKREKVEPKRKQEMDRARERWSQRVGKRQRLSEKRERKDGRNKLQRKKASLK
SIO_010081: LOC111960365
subclass of: SO_0000673
so part of: LOC111960365
location: complement(929049..931388)
location: region:929049-931388:-1
so has part: feature:929049-931388:-1:exon

XP_023838110.1
type: Protein
SIO_000068: ncbiprotein

position:929049:-1
position: 929049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931388:-1
position: 931388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929049-931388:-1:exon

LOC111960091
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(938295..947881)
location: region:938295-947881:-1
so has part: feature:938295-947881:-1:exon
subclass of: SO_0000010

111960091
type: Gene
SIO_000068: ncbigene

position:938295:-1
position: 938295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947881:-1
position: 947881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938295-947881:-1:exon

LOC111960091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960091
product: histone-lysine N-methyltransferase 2D-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_023981999.1
SIO_010081: LOC111960091
subclass of: SO_0000673
so part of: LOC111960091
location: complement(join(938295..939390,939552..939712,940381..940487,943213..943341,944165..945870,947802..947881))
location: region:938295-947881:-1
so has part: feature:947802-947881:-1:exon
so has part: feature:944165-945870:-1:exon
so has part: feature:943213-943341:-1:exon
so has part: feature:940381-940487:-1:exon
so has part: feature:939552-939712:-1:exon
so has part: feature:938295-939390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947802-947881:-1:exon

position:947802:-1
position: 947802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:944165-945870:-1:exon

position:944165:-1
position: 944165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945870:-1
position: 945870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:943213-943341:-1:exon

position:943213:-1
position: 943213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943341:-1
position: 943341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:940381-940487:-1:exon

position:940381:-1
position: 940381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940487:-1
position: 940487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:939552-939712:-1:exon

position:939552:-1
position: 939552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939712:-1
position: 939712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:938295-939390:-1:exon

position:939390:-1
position: 939390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960091
product: histone-lysine N-methyltransferase 2D-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023981998.1
SIO_010081: LOC111960091
subclass of: SO_0000673
so part of: LOC111960091
location: complement(join(938295..939390,939552..939715,940381..940487,943213..943341,944165..945870,947802..947881))
location: region:938295-947881:-1
so has part: feature:947802-947881:-1:exon
so has part: feature:944165-945870:-1:exon
so has part: feature:943213-943341:-1:exon
so has part: feature:940381-940487:-1:exon
so has part: feature:939552-939715:-1:exon
so has part: feature:938295-939390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947802-947881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:944165-945870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943213-943341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940381-940487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939552-939715:-1:exon

position:939715:-1
position: 939715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:938295-939390:-1:exon

LOC111960091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960091
product: histone-lysine N-methyltransferase 2D-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023982000.1
SIO_010081: LOC111960091
subclass of: SO_0000673
so part of: LOC111960091
location: complement(join(938295..939390,939552..939715,940381..940487,943213..943341,944165..945870,946858..947076))
location: region:938295-947076:-1
so has part: feature:946858-947076:-1:exon
so has part: feature:944165-945870:-1:exon
so has part: feature:943213-943341:-1:exon
so has part: feature:940381-940487:-1:exon
so has part: feature:939552-939715:-1:exon
so has part: feature:938295-939390:-1:exon

position:947076:-1
position: 947076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946858-947076:-1:exon

position:946858:-1
position: 946858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:944165-945870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943213-943341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940381-940487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939552-939715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:938295-939390:-1:exon

LOC111960091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2D-like isoform X2
translation: MGEREERGEEGEGTSSPMDLGDTETASIPTPLPHTDPDESKSVTVQRANPDCRVDSERPMSESEPPPQILWESHPAQTVSISPLPDIDPEESESVLKLETAPDTEVDPENTNSDSVPCQTQEEFDSAQKPSEQRDPVPGLILLTDLPFPTVSETALCLVPQLDPCDMRGSEDPISASEPPQIDEGPDPRRNELASMPRPTPHPHIDSRELEATLKLGPDPSPDTDSENPRSTTETPPELQGEPDPAEIPSEQPATALTSMSESEVDLASPAVSSSVSCVGQPDLCNGMRSENPIPASEPLQLEIEKCPDLVQIQANDPLPHLDSQEFEPVPPHKSDPAQTGLQPKQPAPVSLTVKTEPGLSSLAILYPAAYIRQEPGVETLQSDSQGRDRIIEGSHLRCLQPQSQSLPYFPPIQSPTYSPIRPQQSPSISNGPCPMICHSILIPSCPPLDLPPDFPSYHPQINHNCPQPCPNRPSLTHQPRTNFLSLAPQLRPNHLQPPPHFQLSPCLPGPLPGMAGSIPGSIPSQPPPPQDWCRSEGFSSRGMFENYRWWQNLRDMASKIYPDSGPDAEALACFFIPVIRSLCLQYPSLLFTQGISVAVAEWRKLSNYDRMEYYHLAQKFVELEVEEVTAKERSKVIQRSPSGTGQSGAQAELKGYTGKSSATTSAKETETKCNTRVNQAKDKTQRATKSGSGPRVSRGRQLGKVDIKVLEERALGEYTAAMEALLIDPTGVRERLEVRNQEEEGDEKNNDEGGDGEGSFTEYLNELCSQKEFVTKVMNRQRN
SIO_010081: LOC111960091
subclass of: SO_0000673
so part of: LOC111960091
location: complement(join(939163..939390,939552..939712,940381..940487,943213..943341,944165..945870,947802..947825))
location: region:939163-947825:-1
so has part: feature:947802-947825:-1:exon
so has part: feature:944165-945870:-1:exon
so has part: feature:943213-943341:-1:exon
so has part: feature:940381-940487:-1:exon
so has part: feature:939552-939712:-1:exon
so has part: feature:939163-939390:-1:exon

XP_023837767.1
type: Protein
SIO_000068: ncbiprotein

position:939163:-1
position: 939163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947825:-1
position: 947825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947802-947825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:944165-945870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943213-943341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940381-940487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939552-939712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939163-939390:-1:exon

LOC111960091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2D-like isoform X1
translation: MGEREERGEEGEGTSSPMDLGDTETASIPTPLPHTDPDESKSVTVQRANPDCRVDSERPMSESEPPPQILWESHPAQTVSISPLPDIDPEESESVLKLETAPDTEVDPENTNSDSVPCQTQEEFDSAQKPSEQRDPVPGLILLTDLPFPTVSETALCLVPQLDPCDMRGSEDPISASEPPQIDEGPDPRRNELASMPRPTPHPHIDSRELEATLKLGPDPSPDTDSENPRSTTETPPELQGEPDPAEIPSEQPATALTSMSESEVDLASPAVSSSVSCVGQPDLCNGMRSENPIPASEPLQLEIEKCPDLVQIQANDPLPHLDSQEFEPVPPHKSDPAQTGLQPKQPAPVSLTVKTEPGLSSLAILYPAAYIRQEPGVETLQSDSQGRDRIIEGSHLRCLQPQSQSLPYFPPIQSPTYSPIRPQQSPSISNGPCPMICHSILIPSCPPLDLPPDFPSYHPQINHNCPQPCPNRPSLTHQPRTNFLSLAPQLRPNHLQPPPHFQLSPCLPGPLPGMAGSIPGSIPSQPPPPQDWCRSEGFSSRGMFENYRWWQNLRDMASKIYPDSGPDAEALACFFIPVIRSLCLQYPSLLFTQGISVAVAEWRKLSNYDRMEYYHLAQKFVELEVEEVTAKERSKVIQRSPSGTGQSGAQAELKAGYTGKSSATTSAKETETKCNTRVNQAKDKTQRATKSGSGPRVSRGRQLGKVDIKVLEERALGEYTAAMEALLIDPTGVRERLEVRNQEEEGDEKNNDEGGDGEGSFTEYLNELCSQKEFVTKVMNRQRN
SIO_010081: LOC111960091
subclass of: SO_0000673
so part of: LOC111960091
location: complement(join(939163..939390,939552..939715,940381..940487,943213..943341,944165..945870,947802..947825))
location: region:939163-947825:-1
so has part: feature:947802-947825:-1:exon
so has part: feature:944165-945870:-1:exon
so has part: feature:943213-943341:-1:exon
so has part: feature:940381-940487:-1:exon
so has part: feature:939552-939715:-1:exon
so has part: feature:939163-939390:-1:exon

XP_023837766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947802-947825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:944165-945870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943213-943341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940381-940487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939552-939715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939163-939390:-1:exon

LOC111960091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2D-like isoform X3
translation: MDLGDTETASIPTPLPHTDPDESKSVTVQRANPDCRVDSERPMSESEPPPQILWESHPAQTVSISPLPDIDPEESESVLKLETAPDTEVDPENTNSDSVPCQTQEEFDSAQKPSEQRDPVPGLILLTDLPFPTVSETALCLVPQLDPCDMRGSEDPISASEPPQIDEGPDPRRNELASMPRPTPHPHIDSRELEATLKLGPDPSPDTDSENPRSTTETPPELQGEPDPAEIPSEQPATALTSMSESEVDLASPAVSSSVSCVGQPDLCNGMRSENPIPASEPLQLEIEKCPDLVQIQANDPLPHLDSQEFEPVPPHKSDPAQTGLQPKQPAPVSLTVKTEPGLSSLAILYPAAYIRQEPGVETLQSDSQGRDRIIEGSHLRCLQPQSQSLPYFPPIQSPTYSPIRPQQSPSISNGPCPMICHSILIPSCPPLDLPPDFPSYHPQINHNCPQPCPNRPSLTHQPRTNFLSLAPQLRPNHLQPPPHFQLSPCLPGPLPGMAGSIPGSIPSQPPPPQDWCRSEGFSSRGMFENYRWWQNLRDMASKIYPDSGPDAEALACFFIPVIRSLCLQYPSLLFTQGISVAVAEWRKLSNYDRMEYYHLAQKFVELEVEEVTAKERSKVIQRSPSGTGQSGAQAELKAGYTGKSSATTSAKETETKCNTRVNQAKDKTQRATKSGSGPRVSRGRQLGKVDIKVLEERALGEYTAAMEALLIDPTGVRERLEVRNQEEEGDEKNNDEGGDGEGSFTEYLNELCSQKEFVTKVMNRQRN
SIO_010081: LOC111960091
subclass of: SO_0000673
so part of: LOC111960091
location: complement(join(939163..939390,939552..939715,940381..940487,943213..943341,944165..945843))
location: region:939163-945843:-1
so has part: feature:944165-945843:-1:exon
so has part: feature:943213-943341:-1:exon
so has part: feature:940381-940487:-1:exon
so has part: feature:939552-939715:-1:exon
so has part: feature:939163-939390:-1:exon

XP_023837768.1
type: Protein
SIO_000068: ncbiprotein

position:945843:-1
position: 945843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944165-945843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943213-943341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940381-940487:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939552-939715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939163-939390:-1:exon

LOC111960091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960091
product: histone-lysine N-methyltransferase 2D-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_023982001.1
SIO_010081: LOC111960091
subclass of: SO_0000673
so part of: LOC111960091
location: complement(join(939558..939715,943213..943341,944165..945870,947802..947881))
location: region:939558-947881:-1
so has part: feature:947802-947881:-1:exon
so has part: feature:944165-945870:-1:exon
so has part: feature:943213-943341:-1:exon
so has part: feature:939558-939715:-1:exon

position:939558:-1
position: 939558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947802-947881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:944165-945870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943213-943341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939558-939715:-1:exon

LOC111960091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2D-like isoform X4
translation: MGEREERGEEGEGTSSPMDLGDTETASIPTPLPHTDPDESKSVTVQRANPDCRVDSERPMSESEPPPQILWESHPAQTVSISPLPDIDPEESESVLKLETAPDTEVDPENTNSDSVPCQTQEEFDSAQKPSEQRDPVPGLILLTDLPFPTVSETALCLVPQLDPCDMRGSEDPISASEPPQIDEGPDPRRNELASMPRPTPHPHIDSRELEATLKLGPDPSPDTDSENPRSTTETPPELQGEPDPAEIPSEQPATALTSMSESEVDLASPAVSSSVSCVGQPDLCNGMRSENPIPASEPLQLEIEKCPDLVQIQANDPLPHLDSQEFEPVPPHKSDPAQTGLQPKQPAPVSLTVKTEPGLSSLAILYPAAYIRQEPGVETLQSDSQGRDRIIEGSHLRCLQPQSQSLPYFPPIQSPTYSPIRPQQSPSISNGPCPMICHSILIPSCPPLDLPPDFPSYHPQINHNCPQPCPNRPSLTHQPRTNFLSLAPQLRPNHLQPPPHFQLSPCLPGPLPGMAGSIPGSIPSQPPPPQDWCRSEGFSSRGMFENYRWWQNLRDMASKIYPDSGPDAEALACFFIPVIRSLCLQYPSLLFTQGISVAVAEWRKLSNYDRMEYYHLAQNRLHGEEQCHHVSQRDRNQMQHKS
SIO_010081: LOC111960091
subclass of: SO_0000673
so part of: LOC111960091
location: complement(join(939643..939715,943213..943341,944165..945870,947802..947825))
location: region:939643-947825:-1
so has part: feature:947802-947825:-1:exon
so has part: feature:944165-945870:-1:exon
so has part: feature:943213-943341:-1:exon
so has part: feature:939643-939715:-1:exon

XP_023837769.1
type: Protein
SIO_000068: ncbiprotein

position:939643:-1
position: 939643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947802-947825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:944165-945870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943213-943341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939643-939715:-1:exon

LOC111960093
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 947187..948470
location: region:947187-948470:1
so has part: feature:947187-948470:1:exon
subclass of: SO_0000010

111960093
type: Gene
SIO_000068: ncbigene

position:947187:1
position: 947187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948470:1
position: 948470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947187-948470:1:exon

LOC111960093
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960093
product: H/ACA ribonucleoprotein complex subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023982002.1
SIO_010081: LOC111960093
subclass of: SO_0000673
so part of: LOC111960093
location: join(947187..947365,947841..948470)
location: region:947187-948470:1
so has part: feature:947187-947365:1:exon
so has part: feature:947841-948470:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947187-947365:1:exon

position:947365:1
position: 947365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:947841-948470:1:exon

position:947841:1
position: 947841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960093
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H/ACA ribonucleoprotein complex subunit 3
translation: MFLQFYLNENGERVYTLKKVDLLGQPTSSAHPARFSPDDKFSRHRVTLKKRFGLLLTQQPRPIL
SIO_010081: LOC111960093
subclass of: SO_0000673
so part of: LOC111960093
location: join(947312..947365,947841..947981)
location: region:947312-947981:1
so has part: feature:947312-947365:1:exon
so has part: feature:947841-947981:1:exon

XP_023837770.1
type: Protein
SIO_000068: ncbiprotein

position:947312:1
position: 947312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947981:1
position: 947981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947312-947365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:947841-947981:1:exon

LOC111960090
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 948618..975510
location: region:948618-975510:1
so has part: feature:948618-975510:1:exon
subclass of: SO_0000010

111960090
type: Gene
SIO_000068: ncbigene

position:948618:1
position: 948618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975510:1
position: 975510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948618-975510:1:exon

LOC111960090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960090
product: solute carrier family 12 member 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_023981996.1
SIO_010081: LOC111960090
subclass of: SO_0000673
so part of: LOC111960090
location: join(948618..948840,950428..951310,958038..958132,958245..958373,958805..958951,959482..959536,960803..960933,961162..961403,961764..961882,962188..962367,962444..962608,962897..962995,963364..963421,963620..963794,963888..964006,964118..964216,965036..965155,965597..965701,965983..966151,966401..966596,966846..967015,967124..967255,967530..967655,971623..971894,972105..972238,972479..975510)
location: region:948618-975510:1
so has part: feature:948618-948840:1:exon
so has part: feature:950428-951310:1:exon
so has part: feature:958038-958132:1:exon
so has part: feature:958245-958373:1:exon
so has part: feature:958805-958951:1:exon
so has part: feature:959482-959536:1:exon
so has part: feature:960803-960933:1:exon
so has part: feature:961162-961403:1:exon
so has part: feature:961764-961882:1:exon
so has part: feature:962188-962367:1:exon
so has part: feature:962444-962608:1:exon
so has part: feature:962897-962995:1:exon
so has part: feature:963364-963421:1:exon
so has part: feature:963620-963794:1:exon
so has part: feature:963888-964006:1:exon
so has part: feature:964118-964216:1:exon
so has part: feature:965036-965155:1:exon
so has part: feature:965597-965701:1:exon
so has part: feature:965983-966151:1:exon
so has part: feature:966401-966596:1:exon
so has part: feature:966846-967015:1:exon
so has part: feature:967124-967255:1:exon
so has part: feature:967530-967655:1:exon
so has part: feature:971623-971894:1:exon
so has part: feature:972105-972238:1:exon
so has part: feature:972479-975510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:948618-948840:1:exon

position:948840:1
position: 948840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950428-951310:1:exon

position:950428:1
position: 950428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951310:1
position: 951310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:958038-958132:1:exon

position:958038:1
position: 958038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958132:1
position: 958132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:958245-958373:1:exon

position:958245:1
position: 958245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958373:1
position: 958373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958805-958951:1:exon

position:958805:1
position: 958805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958951:1
position: 958951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:959482-959536:1:exon

position:959482:1
position: 959482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959536:1
position: 959536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:960803-960933:1:exon

position:960803:1
position: 960803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960933:1
position: 960933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:961162-961403:1:exon

position:961162:1
position: 961162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961403:1
position: 961403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:961764-961882:1:exon

position:961764:1
position: 961764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961882:1
position: 961882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:962188-962367:1:exon

position:962188:1
position: 962188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962367:1
position: 962367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:962444-962608:1:exon

position:962444:1
position: 962444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962608:1
position: 962608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:962897-962995:1:exon

position:962897:1
position: 962897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962995:1
position: 962995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:963364-963421:1:exon

position:963364:1
position: 963364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963421:1
position: 963421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:963620-963794:1:exon

position:963620:1
position: 963620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963794:1
position: 963794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:963888-964006:1:exon

position:963888:1
position: 963888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964006:1
position: 964006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:964118-964216:1:exon

position:964118:1
position: 964118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964216:1
position: 964216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:965036-965155:1:exon

position:965036:1
position: 965036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965155:1
position: 965155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:965597-965701:1:exon

position:965597:1
position: 965597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965701:1
position: 965701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:965983-966151:1:exon

position:965983:1
position: 965983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966151:1
position: 966151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:966401-966596:1:exon

position:966401:1
position: 966401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966596:1
position: 966596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:966846-967015:1:exon

position:966846:1
position: 966846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967015:1
position: 967015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:967124-967255:1:exon

position:967124:1
position: 967124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967255:1
position: 967255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:967530-967655:1:exon

position:967530:1
position: 967530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967655:1
position: 967655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:971623-971894:1:exon

position:971623:1
position: 971623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971894:1
position: 971894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:972105-972238:1:exon

position:972105:1
position: 972105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972238:1
position: 972238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:972479-975510:1:exon

position:972479:1
position: 972479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960090
product: solute carrier family 12 member 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_023981994.1
SIO_010081: LOC111960090
subclass of: SO_0000673
so part of: LOC111960090
location: join(948618..948840,950428..950470,951083..951310,958035..958132,958245..958373,958805..958951,959482..959536,960803..960933,961162..961403,961764..961882,962188..962367,962444..962608,962897..962995,963364..963421,963620..963794,963888..964006,964118..964216,965036..965155,965597..965701,965983..966151,966401..966596,966846..967015,967124..967255,967530..967655,971623..971894,972105..972238,972479..975510)
location: region:948618-975510:1
so has part: feature:948618-948840:1:exon
so has part: feature:950428-950470:1:exon
so has part: feature:951083-951310:1:exon
so has part: feature:958035-958132:1:exon
so has part: feature:958245-958373:1:exon
so has part: feature:958805-958951:1:exon
so has part: feature:959482-959536:1:exon
so has part: feature:960803-960933:1:exon
so has part: feature:961162-961403:1:exon
so has part: feature:961764-961882:1:exon
so has part: feature:962188-962367:1:exon
so has part: feature:962444-962608:1:exon
so has part: feature:962897-962995:1:exon
so has part: feature:963364-963421:1:exon
so has part: feature:963620-963794:1:exon
so has part: feature:963888-964006:1:exon
so has part: feature:964118-964216:1:exon
so has part: feature:965036-965155:1:exon
so has part: feature:965597-965701:1:exon
so has part: feature:965983-966151:1:exon
so has part: feature:966401-966596:1:exon
so has part: feature:966846-967015:1:exon
so has part: feature:967124-967255:1:exon
so has part: feature:967530-967655:1:exon
so has part: feature:971623-971894:1:exon
so has part: feature:972105-972238:1:exon
so has part: feature:972479-975510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:948618-948840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950428-950470:1:exon

position:950470:1
position: 950470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:951083-951310:1:exon

position:951083:1
position: 951083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:958035-958132:1:exon

position:958035:1
position: 958035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958245-958373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:958805-958951:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:959482-959536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960803-960933:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:961162-961403:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:961764-961882:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962188-962367:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962444-962608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:962897-962995:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963364-963421:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:963620-963794:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:963888-964006:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:964118-964216:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:965036-965155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965597-965701:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:965983-966151:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966401-966596:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966846-967015:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967124-967255:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:967530-967655:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:971623-971894:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:972105-972238:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:972479-975510:1:exon

LOC111960090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960090
product: solute carrier family 12 member 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_023981995.1
SIO_010081: LOC111960090
subclass of: SO_0000673
so part of: LOC111960090
location: join(948618..948840,951083..951310,958035..958132,958245..958373,958805..958951,959482..959536,960803..960933,961162..961403,961764..961882,962188..962367,962444..962608,962897..962995,963364..963421,963620..963794,963888..964006,964118..964216,965036..965155,965597..965701,965983..966151,966401..966596,966846..967015,967124..967255,967530..967655,971623..971894,972105..972238,972479..975510)
location: region:948618-975510:1
so has part: feature:948618-948840:1:exon
so has part: feature:951083-951310:1:exon
so has part: feature:958035-958132:1:exon
so has part: feature:958245-958373:1:exon
so has part: feature:958805-958951:1:exon
so has part: feature:959482-959536:1:exon
so has part: feature:960803-960933:1:exon
so has part: feature:961162-961403:1:exon
so has part: feature:961764-961882:1:exon
so has part: feature:962188-962367:1:exon
so has part: feature:962444-962608:1:exon
so has part: feature:962897-962995:1:exon
so has part: feature:963364-963421:1:exon
so has part: feature:963620-963794:1:exon
so has part: feature:963888-964006:1:exon
so has part: feature:964118-964216:1:exon
so has part: feature:965036-965155:1:exon
so has part: feature:965597-965701:1:exon
so has part: feature:965983-966151:1:exon
so has part: feature:966401-966596:1:exon
so has part: feature:966846-967015:1:exon
so has part: feature:967124-967255:1:exon
so has part: feature:967530-967655:1:exon
so has part: feature:971623-971894:1:exon
so has part: feature:972105-972238:1:exon
so has part: feature:972479-975510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:948618-948840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:951083-951310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958035-958132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958245-958373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958805-958951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959482-959536:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960803-960933:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:961162-961403:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:961764-961882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:962188-962367:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962444-962608:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962897-962995:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963364-963421:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963620-963794:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:963888-964006:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:964118-964216:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:965036-965155:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:965597-965701:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965983-966151:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966401-966596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966846-967015:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:967124-967255:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967530-967655:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:971623-971894:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:972105-972238:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:972479-975510:1:exon

LOC111960090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960090
product: solute carrier family 12 member 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_023981997.1
SIO_010081: LOC111960090
subclass of: SO_0000673
so part of: LOC111960090
location: join(948619..948840,950428..951310,958035..958132,958245..958373,958805..958951,959482..959536,960803..960933,961162..961403,961764..961882,962188..962367,962444..962608,962897..962995,963364..963421,963620..963794,963888..964006,964118..964216,965036..965155,965597..965701,965983..966151,966401..966596,966846..967015,967124..967255,967530..967637,971623..971894,972105..972238,972479..975510)
location: region:948619-975510:1
so has part: feature:948619-948840:1:exon
so has part: feature:950428-951310:1:exon
so has part: feature:958035-958132:1:exon
so has part: feature:958245-958373:1:exon
so has part: feature:958805-958951:1:exon
so has part: feature:959482-959536:1:exon
so has part: feature:960803-960933:1:exon
so has part: feature:961162-961403:1:exon
so has part: feature:961764-961882:1:exon
so has part: feature:962188-962367:1:exon
so has part: feature:962444-962608:1:exon
so has part: feature:962897-962995:1:exon
so has part: feature:963364-963421:1:exon
so has part: feature:963620-963794:1:exon
so has part: feature:963888-964006:1:exon
so has part: feature:964118-964216:1:exon
so has part: feature:965036-965155:1:exon
so has part: feature:965597-965701:1:exon
so has part: feature:965983-966151:1:exon
so has part: feature:966401-966596:1:exon
so has part: feature:966846-967015:1:exon
so has part: feature:967124-967255:1:exon
so has part: feature:967530-967637:1:exon
so has part: feature:971623-971894:1:exon
so has part: feature:972105-972238:1:exon
so has part: feature:972479-975510:1:exon

position:948619:1
position: 948619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948619-948840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950428-951310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958035-958132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958245-958373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958805-958951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959482-959536:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960803-960933:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:961162-961403:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:961764-961882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:962188-962367:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962444-962608:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962897-962995:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963364-963421:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963620-963794:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:963888-964006:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:964118-964216:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:965036-965155:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:965597-965701:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965983-966151:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966401-966596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966846-967015:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:967124-967255:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967530-967637:1:exon

position:967637:1
position: 967637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:971623-971894:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:972105-972238:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:972479-975510:1:exon

LOC111960090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 6 isoform X1
translation: MASVRFTVTPTKAEDLPGLSDTSPDISSRSSGRGHVRFGSRESVNRSEPLSEGSGGLTTTGENETPDRTSTEQVGDGNAKMSNVYINNSHGVDDDDFYDRNLALFEEEMDTRPKVSSLLNRLANYTNLTQGAREHEEAESIGEKRKAHKSPQMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQALCIVFICCCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLMYIAPWAAIFVSSGPDGEGAAMLNNMRVYGSIFLLLMALLVFVGVKYVNKLASVFLACVIISILSIYTGALVSAFSPPTFPVCMLGNRTLSGHILHDSPCAKTTLPKEPPRPVDTNLTLAGNGTVPSTFDPSLPSSEATTALWLQFCEGPDLNASCDYYFNLSNISEIPGIPGLSSGVITENIWSVYLSKGDVLEKGSLPSPRPVHPPTNRLPYVFADITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQRSIPIGTIMAILTTSLVYLSSVVLFGACIEGVVLRDKFGDSVKGNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKANGEPTWALLLTALIAELGILIASLDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFSYYHWTLSFLGMIICLALMFISSWYYAIVAIVIAGMIYKYIEYHGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDAYVKSPRLLTFASQLKAGKGLTIVGTVITGNYLHSYGEALAAEQTLKHQMDKEKVKGFCQCIVANKAREGISHMIQSSGLGGMRHNTVVMGWPLAWRQSEDPQSWKTFINTVRVTTAAHLALLVPKNISLFPGNSEPCAEGYIDVWWIVHDGGMLMLLPFLLRQHKVWRKCAMRIFTVAQMEDNSIQMKKDLATFLYHLRIEADVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLSKSDREKEVRRPQQAQLVKDRNSMLRLTSIGSDDDEDTDGGGGPTGNAEKGGGAAGGRERDGGMSASENRRVHMTWTKEKALQYRATHSGCSTPEGFRDMLSIRPDHSNVRRMHTAVKLNEVIVNKSHDARLVLLNMPGPPRNPAGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS
SIO_010081: LOC111960090
subclass of: SO_0000673
so part of: LOC111960090
location: join(951091..951310,958035..958132,958245..958373,958805..958951,959482..959536,960803..960933,961162..961403,961764..961882,962188..962367,962444..962608,962897..962995,963364..963421,963620..963794,963888..964006,964118..964216,965036..965155,965597..965701,965983..966151,966401..966596,966846..967015,967124..967255,967530..967655,971623..971894,972105..972238,972479..972570)
location: region:951091-972570:1
so has part: feature:951091-951310:1:exon
so has part: feature:958035-958132:1:exon
so has part: feature:958245-958373:1:exon
so has part: feature:958805-958951:1:exon
so has part: feature:959482-959536:1:exon
so has part: feature:960803-960933:1:exon
so has part: feature:961162-961403:1:exon
so has part: feature:961764-961882:1:exon
so has part: feature:962188-962367:1:exon
so has part: feature:962444-962608:1:exon
so has part: feature:962897-962995:1:exon
so has part: feature:963364-963421:1:exon
so has part: feature:963620-963794:1:exon
so has part: feature:963888-964006:1:exon
so has part: feature:964118-964216:1:exon
so has part: feature:965036-965155:1:exon
so has part: feature:965597-965701:1:exon
so has part: feature:965983-966151:1:exon
so has part: feature:966401-966596:1:exon
so has part: feature:966846-967015:1:exon
so has part: feature:967124-967255:1:exon
so has part: feature:967530-967655:1:exon
so has part: feature:971623-971894:1:exon
so has part: feature:972105-972238:1:exon
so has part: feature:972479-972570:1:exon

XP_023837762.1
type: Protein
SIO_000068: ncbiprotein

position:951091:1
position: 951091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972570:1
position: 972570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951091-951310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958035-958132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958245-958373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958805-958951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959482-959536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960803-960933:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961162-961403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:961764-961882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:962188-962367:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:962444-962608:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962897-962995:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963364-963421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963620-963794:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963888-964006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:964118-964216:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:965036-965155:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:965597-965701:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:965983-966151:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:966401-966596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966846-967015:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:967124-967255:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:967530-967655:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:971623-971894:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:972105-972238:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:972479-972570:1:exon

LOC111960090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 6 isoform X1
translation: MASVRFTVTPTKAEDLPGLSDTSPDISSRSSGRGHVRFGSRESVNRSEPLSEGSGGLTTTGENETPDRTSTEQVGDGNAKMSNVYINNSHGVDDDDFYDRNLALFEEEMDTRPKVSSLLNRLANYTNLTQGAREHEEAESIGEKRKAHKSPQMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQALCIVFICCCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLMYIAPWAAIFVSSGPDGEGAAMLNNMRVYGSIFLLLMALLVFVGVKYVNKLASVFLACVIISILSIYTGALVSAFSPPTFPVCMLGNRTLSGHILHDSPCAKTTLPKEPPRPVDTNLTLAGNGTVPSTFDPSLPSSEATTALWLQFCEGPDLNASCDYYFNLSNISEIPGIPGLSSGVITENIWSVYLSKGDVLEKGSLPSPRPVHPPTNRLPYVFADITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQRSIPIGTIMAILTTSLVYLSSVVLFGACIEGVVLRDKFGDSVKGNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKANGEPTWALLLTALIAELGILIASLDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFSYYHWTLSFLGMIICLALMFISSWYYAIVAIVIAGMIYKYIEYHGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDAYVKSPRLLTFASQLKAGKGLTIVGTVITGNYLHSYGEALAAEQTLKHQMDKEKVKGFCQCIVANKAREGISHMIQSSGLGGMRHNTVVMGWPLAWRQSEDPQSWKTFINTVRVTTAAHLALLVPKNISLFPGNSEPCAEGYIDVWWIVHDGGMLMLLPFLLRQHKVWRKCAMRIFTVAQMEDNSIQMKKDLATFLYHLRIEADVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLSKSDREKEVRRPQQAQLVKDRNSMLRLTSIGSDDDEDTDGGGGPTGNAEKGGGAAGGRERDGGMSASENRRVHMTWTKEKALQYRATHSGCSTPEGFRDMLSIRPDHSNVRRMHTAVKLNEVIVNKSHDARLVLLNMPGPPRNPAGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS
SIO_010081: LOC111960090
subclass of: SO_0000673
so part of: LOC111960090
location: join(951091..951310,958035..958132,958245..958373,958805..958951,959482..959536,960803..960933,961162..961403,961764..961882,962188..962367,962444..962608,962897..962995,963364..963421,963620..963794,963888..964006,964118..964216,965036..965155,965597..965701,965983..966151,966401..966596,966846..967015,967124..967255,967530..967655,971623..971894,972105..972238,972479..972570)
location: region:951091-972570:1
so has part: feature:951091-951310:1:exon
so has part: feature:958035-958132:1:exon
so has part: feature:958245-958373:1:exon
so has part: feature:958805-958951:1:exon
so has part: feature:959482-959536:1:exon
so has part: feature:960803-960933:1:exon
so has part: feature:961162-961403:1:exon
so has part: feature:961764-961882:1:exon
so has part: feature:962188-962367:1:exon
so has part: feature:962444-962608:1:exon
so has part: feature:962897-962995:1:exon
so has part: feature:963364-963421:1:exon
so has part: feature:963620-963794:1:exon
so has part: feature:963888-964006:1:exon
so has part: feature:964118-964216:1:exon
so has part: feature:965036-965155:1:exon
so has part: feature:965597-965701:1:exon
so has part: feature:965983-966151:1:exon
so has part: feature:966401-966596:1:exon
so has part: feature:966846-967015:1:exon
so has part: feature:967124-967255:1:exon
so has part: feature:967530-967655:1:exon
so has part: feature:971623-971894:1:exon
so has part: feature:972105-972238:1:exon
so has part: feature:972479-972570:1:exon

XP_023837763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:951091-951310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958035-958132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958245-958373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958805-958951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959482-959536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960803-960933:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961162-961403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:961764-961882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:962188-962367:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:962444-962608:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962897-962995:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963364-963421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963620-963794:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963888-964006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:964118-964216:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:965036-965155:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:965597-965701:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:965983-966151:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:966401-966596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966846-967015:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:967124-967255:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:967530-967655:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:971623-971894:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:972105-972238:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:972479-972570:1:exon

LOC111960090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 6 isoform X3
translation: MASVRFTVTPTKAEDLPGLSDTSPDISSRSSGRGHVRFGSRESVNRSEPLSEGSGGLTTTGENETPDRTSTEQVGDGNAKMSNVYINNSHGVDDDDFYDRNLALFEEEMDTRPKVSSLLNRLANYTNLTQGAREHEEAESIGEKRKAHKSPQMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQALCIVFICCCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLMYIAPWAAIFVSSGPDGEGAAMLNNMRVYGSIFLLLMALLVFVGVKYVNKLASVFLACVIISILSIYTGALVSAFSPPTFPVCMLGNRTLSGHILHDSPCAKTTLPKEPPRPVDTNLTLAGNGTVPSTFDPSLPSSEATTALWLQFCEGPDLNASCDYYFNLSNISEIPGIPGLSSGVITENIWSVYLSKGDVLEKGSLPSPRPVHPPTNRLPYVFADITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQRSIPIGTIMAILTTSLVYLSSVVLFGACIEGVVLRDKFGDSVKGNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKANGEPTWALLLTALIAELGILIASLDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFSYYHWTLSFLGMIICLALMFISSWYYAIVAIVIAGMIYKYIEYHGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDAYVKSPRLLTFASQLKAGKGLTIVGTVITGNYLHSYGEALAAEQTLKHQMDKEKVKGFCQCIVANKAREGISHMIQSSGLGGMRHNTVVMGWPLAWRQSEDPQSWKTFINTVRVTTAAHLALLVPKNISLFPGNSEPCAEGYIDVWWIVHDGGMLMLLPFLLRQHKVWRKCAMRIFTVAQMEDNSIQMKKDLATFLYHLRIEADVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLSKSDREKEAQLVKDRNSMLRLTSIGSDDDEDTDGGGGPTGNAEKGGGAAGGRERDGGMSASENRRVHMTWTKEKALQYRATHSGCSTPEGFRDMLSIRPDHSNVRRMHTAVKLNEVIVNKSHDARLVLLNMPGPPRNPAGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS
SIO_010081: LOC111960090
subclass of: SO_0000673
so part of: LOC111960090
location: join(951091..951310,958035..958132,958245..958373,958805..958951,959482..959536,960803..960933,961162..961403,961764..961882,962188..962367,962444..962608,962897..962995,963364..963421,963620..963794,963888..964006,964118..964216,965036..965155,965597..965701,965983..966151,966401..966596,966846..967015,967124..967255,967530..967637,971623..971894,972105..972238,972479..972570)
location: region:951091-972570:1
so has part: feature:951091-951310:1:exon
so has part: feature:958035-958132:1:exon
so has part: feature:958245-958373:1:exon
so has part: feature:958805-958951:1:exon
so has part: feature:959482-959536:1:exon
so has part: feature:960803-960933:1:exon
so has part: feature:961162-961403:1:exon
so has part: feature:961764-961882:1:exon
so has part: feature:962188-962367:1:exon
so has part: feature:962444-962608:1:exon
so has part: feature:962897-962995:1:exon
so has part: feature:963364-963421:1:exon
so has part: feature:963620-963794:1:exon
so has part: feature:963888-964006:1:exon
so has part: feature:964118-964216:1:exon
so has part: feature:965036-965155:1:exon
so has part: feature:965597-965701:1:exon
so has part: feature:965983-966151:1:exon
so has part: feature:966401-966596:1:exon
so has part: feature:966846-967015:1:exon
so has part: feature:967124-967255:1:exon
so has part: feature:967530-967637:1:exon
so has part: feature:971623-971894:1:exon
so has part: feature:972105-972238:1:exon
so has part: feature:972479-972570:1:exon

XP_023837765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:951091-951310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958035-958132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958245-958373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958805-958951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959482-959536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960803-960933:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961162-961403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:961764-961882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:962188-962367:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:962444-962608:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962897-962995:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963364-963421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963620-963794:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963888-964006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:964118-964216:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:965036-965155:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:965597-965701:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:965983-966151:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:966401-966596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966846-967015:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:967124-967255:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:967530-967637:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:971623-971894:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:972105-972238:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:972479-972570:1:exon

LOC111960090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 6 isoform X2
translation: MASVRFTVTPTKAEDLPGLSDTSPDISSRSSGRGHVRFGSRESVNRSEPLSEGSGGLTTTGENETPDRTSTEQGDGNAKMSNVYINNSHGVDDDDFYDRNLALFEEEMDTRPKVSSLLNRLANYTNLTQGAREHEEAESIGEKRKAHKSPQMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQALCIVFICCCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLMYIAPWAAIFVSSGPDGEGAAMLNNMRVYGSIFLLLMALLVFVGVKYVNKLASVFLACVIISILSIYTGALVSAFSPPTFPVCMLGNRTLSGHILHDSPCAKTTLPKEPPRPVDTNLTLAGNGTVPSTFDPSLPSSEATTALWLQFCEGPDLNASCDYYFNLSNISEIPGIPGLSSGVITENIWSVYLSKGDVLEKGSLPSPRPVHPPTNRLPYVFADITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQRSIPIGTIMAILTTSLVYLSSVVLFGACIEGVVLRDKFGDSVKGNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKANGEPTWALLLTALIAELGILIASLDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFSYYHWTLSFLGMIICLALMFISSWYYAIVAIVIAGMIYKYIEYHGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDAYVKSPRLLTFASQLKAGKGLTIVGTVITGNYLHSYGEALAAEQTLKHQMDKEKVKGFCQCIVANKAREGISHMIQSSGLGGMRHNTVVMGWPLAWRQSEDPQSWKTFINTVRVTTAAHLALLVPKNISLFPGNSEPCAEGYIDVWWIVHDGGMLMLLPFLLRQHKVWRKCAMRIFTVAQMEDNSIQMKKDLATFLYHLRIEADVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLSKSDREKEVRRPQQAQLVKDRNSMLRLTSIGSDDDEDTDGGGGPTGNAEKGGGAAGGRERDGGMSASENRRVHMTWTKEKALQYRATHSGCSTPEGFRDMLSIRPDHSNVRRMHTAVKLNEVIVNKSHDARLVLLNMPGPPRNPAGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS
SIO_010081: LOC111960090
subclass of: SO_0000673
so part of: LOC111960090
location: join(951091..951310,958038..958132,958245..958373,958805..958951,959482..959536,960803..960933,961162..961403,961764..961882,962188..962367,962444..962608,962897..962995,963364..963421,963620..963794,963888..964006,964118..964216,965036..965155,965597..965701,965983..966151,966401..966596,966846..967015,967124..967255,967530..967655,971623..971894,972105..972238,972479..972570)
location: region:951091-972570:1
so has part: feature:951091-951310:1:exon
so has part: feature:958038-958132:1:exon
so has part: feature:958245-958373:1:exon
so has part: feature:958805-958951:1:exon
so has part: feature:959482-959536:1:exon
so has part: feature:960803-960933:1:exon
so has part: feature:961162-961403:1:exon
so has part: feature:961764-961882:1:exon
so has part: feature:962188-962367:1:exon
so has part: feature:962444-962608:1:exon
so has part: feature:962897-962995:1:exon
so has part: feature:963364-963421:1:exon
so has part: feature:963620-963794:1:exon
so has part: feature:963888-964006:1:exon
so has part: feature:964118-964216:1:exon
so has part: feature:965036-965155:1:exon
so has part: feature:965597-965701:1:exon
so has part: feature:965983-966151:1:exon
so has part: feature:966401-966596:1:exon
so has part: feature:966846-967015:1:exon
so has part: feature:967124-967255:1:exon
so has part: feature:967530-967655:1:exon
so has part: feature:971623-971894:1:exon
so has part: feature:972105-972238:1:exon
so has part: feature:972479-972570:1:exon

XP_023837764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:951091-951310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958038-958132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958245-958373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958805-958951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959482-959536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960803-960933:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961162-961403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:961764-961882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:962188-962367:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:962444-962608:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962897-962995:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963364-963421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963620-963794:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963888-964006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:964118-964216:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:965036-965155:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:965597-965701:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:965983-966151:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:966401-966596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966846-967015:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:967124-967255:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:967530-967655:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:971623-971894:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:972105-972238:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:972479-972570:1:exon

LOC111960094
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 976669..985790
location: region:976669-985790:1
so has part: feature:976669-985790:1:exon

111960094
type: Gene
SIO_000068: ncbigene

position:976669:1
position: 976669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985790:1
position: 985790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976669-985790:1:exon

LOC111960094
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960094
subclass of: SO_0000673
so part of: LOC111960094
location: 976669..977370
location: region:976669-977370:1
so has part: feature:976669-977370:1:exon

position:977370:1
position: 977370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976669-977370:1:exon

LOC111960094
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960094
subclass of: SO_0000673
so part of: LOC111960094
location: 977728..977796
location: region:977728-977796:1
so has part: feature:977728-977796:1:exon

position:977728:1
position: 977728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977796:1
position: 977796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977728-977796:1:exon

LOC111960094
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960094
subclass of: SO_0000673
so part of: LOC111960094
location: 978095..978393
location: region:978095-978393:1
so has part: feature:978095-978393:1:exon

position:978095:1
position: 978095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978393:1
position: 978393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978095-978393:1:exon

LOC111960094
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960094
subclass of: SO_0000673
so part of: LOC111960094
location: 978582..978842
location: region:978582-978842:1
so has part: feature:978582-978842:1:exon

position:978582:1
position: 978582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978842:1
position: 978842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978582-978842:1:exon

LOC111960094
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960094
subclass of: SO_0000673
so part of: LOC111960094
location: 980677..980994
location: region:980677-980994:1
so has part: feature:980677-980994:1:exon

position:980677:1
position: 980677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980994:1
position: 980994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980677-980994:1:exon

LOC111960094
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960094
subclass of: SO_0000673
so part of: LOC111960094
location: 983315..983395
location: region:983315-983395:1
so has part: feature:983315-983395:1:exon

position:983315:1
position: 983315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983395:1
position: 983395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983315-983395:1:exon

LOC111960094
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960094
subclass of: SO_0000673
so part of: LOC111960094
location: 983560..984198
location: region:983560-984198:1
so has part: feature:983560-984198:1:exon

position:983560:1
position: 983560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984198:1
position: 984198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983560-984198:1:exon

LOC111960094
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960094
subclass of: SO_0000673
so part of: LOC111960094
location: 984311..984465
location: region:984311-984465:1
so has part: feature:984311-984465:1:exon

position:984311:1
position: 984311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984465:1
position: 984465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984311-984465:1:exon

LOC111960094
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960094
subclass of: SO_0000673
so part of: LOC111960094
location: 984639..985790
location: region:984639-985790:1
so has part: feature:984639-985790:1:exon

position:984639:1
position: 984639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984639-985790:1:exon

LOC111960126
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 988387..1012556
location: region:988387-1012556:1
so has part: feature:988387-1012556:1:exon
subclass of: SO_0000010

111960126
type: Gene
SIO_000068: ncbigene

position:988387:1
position: 988387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012556:1
position: 1012556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988387-1012556:1:exon

LOC111960126
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960126
product: FACT complex subunit SPT16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982030.1
SIO_010081: LOC111960126
subclass of: SO_0000673
so part of: LOC111960126
location: join(988387..988629,989554..989646,991302..991472,991667..991819,992082..992228,992497..992648,993094..993266,993377..993467,996515..996588,996735..996847,997065..997130,997385..997483,997619..997734,999567..999720,999827..999954,1000111..1000373,1000744..1000862,1001036..1001089,1001174..1001362,1001813..1001880,1006253..1006640,1006932..1007129,1007196..1007291,1009700..1009932,1010968..1011097,1011199..1011328,1011418..1011492,1011737..1012556)
location: region:988387-1012556:1
so has part: feature:988387-988629:1:exon
so has part: feature:989554-989646:1:exon
so has part: feature:991302-991472:1:exon
so has part: feature:991667-991819:1:exon
so has part: feature:992082-992228:1:exon
so has part: feature:992497-992648:1:exon
so has part: feature:993094-993266:1:exon
so has part: feature:993377-993467:1:exon
so has part: feature:996515-996588:1:exon
so has part: feature:996735-996847:1:exon
so has part: feature:997065-997130:1:exon
so has part: feature:997385-997483:1:exon
so has part: feature:997619-997734:1:exon
so has part: feature:999567-999720:1:exon
so has part: feature:999827-999954:1:exon
so has part: feature:1000111-1000373:1:exon
so has part: feature:1000744-1000862:1:exon
so has part: feature:1001036-1001089:1:exon
so has part: feature:1001174-1001362:1:exon
so has part: feature:1001813-1001880:1:exon
so has part: feature:1006253-1006640:1:exon
so has part: feature:1006932-1007129:1:exon
so has part: feature:1007196-1007291:1:exon
so has part: feature:1009700-1009932:1:exon
so has part: feature:1010968-1011097:1:exon
so has part: feature:1011199-1011328:1:exon
so has part: feature:1011418-1011492:1:exon
so has part: feature:1011737-1012556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:988387-988629:1:exon

position:988629:1
position: 988629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:989554-989646:1:exon

position:989554:1
position: 989554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989646:1
position: 989646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:991302-991472:1:exon

position:991302:1
position: 991302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991472:1
position: 991472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:991667-991819:1:exon

position:991667:1
position: 991667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991819:1
position: 991819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:992082-992228:1:exon

position:992082:1
position: 992082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992228:1
position: 992228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:992497-992648:1:exon

position:992497:1
position: 992497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992648:1
position: 992648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:993094-993266:1:exon

position:993094:1
position: 993094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993266:1
position: 993266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:993377-993467:1:exon

position:993377:1
position: 993377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993467:1
position: 993467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:996515-996588:1:exon

position:996515:1
position: 996515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996588:1
position: 996588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:996735-996847:1:exon

position:996735:1
position: 996735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996847:1
position: 996847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:997065-997130:1:exon

position:997065:1
position: 997065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997130:1
position: 997130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:997385-997483:1:exon

position:997385:1
position: 997385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997483:1
position: 997483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:997619-997734:1:exon

position:997619:1
position: 997619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997734:1
position: 997734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:999567-999720:1:exon

position:999567:1
position: 999567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999720:1
position: 999720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:999827-999954:1:exon

position:999827:1
position: 999827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999954:1
position: 999954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1000111-1000373:1:exon

position:1000111:1
position: 1000111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000373:1
position: 1000373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1000744-1000862:1:exon

position:1000744:1
position: 1000744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000862:1
position: 1000862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1001036-1001089:1:exon

position:1001036:1
position: 1001036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001089:1
position: 1001089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1001174-1001362:1:exon

position:1001174:1
position: 1001174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001362:1
position: 1001362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1001813-1001880:1:exon

position:1001813:1
position: 1001813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001880:1
position: 1001880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1006253-1006640:1:exon

position:1006253:1
position: 1006253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006640:1
position: 1006640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1006932-1007129:1:exon

position:1006932:1
position: 1006932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007129:1
position: 1007129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1007196-1007291:1:exon

position:1007196:1
position: 1007196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007291:1
position: 1007291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1009700-1009932:1:exon

position:1009700:1
position: 1009700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009932:1
position: 1009932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1010968-1011097:1:exon

position:1010968:1
position: 1010968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011097:1
position: 1011097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1011199-1011328:1:exon

position:1011199:1
position: 1011199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011328:1
position: 1011328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1011418-1011492:1:exon

position:1011418:1
position: 1011418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011492:1
position: 1011492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1011737-1012556:1:exon

position:1011737:1
position: 1011737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960126
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16
translation: MAVNLDKEAYYRRIKRLYGNWKKGEDEFGKVDAMVVSVGVDEEIVYAKSTALQTWLFGYELTDTIMVFCESKIIFLASKKKVEFLKQVAVTKGNENANGVPPITLLVREKNESNKVNFEKMVEAIRASKEGKTVGVFSKDKFPGEYMKSWNDMITAEGLEKVDISAVVAYTIAVKEDGELALMRKAAAVTSDVYSKFFKERVMEIVDADEKVRHSKLAESVEKAIEEKKYLGGADPSTVEMCYPPIIQSGGNYSLKFSVVSDKNHMHFGAITCAMGIRYKSYCSNLVRTLMVDPPQEMQDNYSFLLQVEEELLKELKHGVKICDVYNAVLDYVKKEKPDLAAKFTKNLGFAMGIEFREGSLVLNSKNQYKLKKGMVLSISLGFADLVNKEGKKEEQKKYALFIGDSVQINEDDPATVLTPVKKKIKNVGIFLKNDEEEDDEEDADDAEELLGKGARGQALLQDRTRNEMTAEEKRRAHQKELANQVNEEAKRRLTEQKGEQQVQKSRKSNVSYKNGSQMPREKDVRDMKIFIDKKYETVVMPVFGIATPFHIATIKNISSSVEGDWTYLRINFYVPGSSLGRNEGNIFPNPDATFVKEITYRASNLKAPGDPTVPSTNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHTNGFRFTSVRGDKVDILYNNIKHSLFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKSAFKNFIEKVETLTKEALEFEVPFSVSLWGAPYRKYLSAAAHLQFLCNTTNGAVRSRCQIAVTAPAASAVRLPNPAQAVHASPWLCRPFTCVPLLRHGVGSRCPVGRYIASRCPARPSRSRLAQGVDRCFRCRPLLLPLLVARYWLPLLVPYAPAAMPYSPAAASAVSRPLPFTVFAPAVYVTLLLPLPDARYGFRCQCRYELPAASAFRLPLLVPLRLRCQGRSALPLPGPFGSACQGRYGLRCRAGRYGSRCQGRYGSRCQGRLRLRCQLAATAPVPVKRDMLSAVYYVFIPSSLLPQPPFVVTLDEVELVHFERVQFHLKNFDVVIVYKDYSKKVTMINAVPVNSLDPIKEWLNSCDIKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLDPESEGEGAEDDSESGEDGTFNPSADESEVEEEDSDEDYDSESEDSGNDYSASLGSEEESGKDWDELEEEARKADKESHYEDAEETSSAKRKGRSSAPPPSAKKKRRH
SIO_010081: LOC111960126
subclass of: SO_0000673
so part of: LOC111960126
location: join(988564..988629,989554..989646,991302..991472,991667..991819,992082..992228,992497..992648,993094..993266,993377..993467,996515..996588,996735..996847,997065..997130,997385..997483,997619..997734,999567..999720,999827..999954,1000111..1000373,1000744..1000862,1001036..1001089,1001174..1001362,1001813..1001880,1006253..1006640,1006932..1007129,1007196..1007291,1009700..1009932,1010968..1011097,1011199..1011328,1011418..1011492,1011737..1011843)
location: region:988564-1011843:1
so has part: feature:988564-988629:1:exon
so has part: feature:989554-989646:1:exon
so has part: feature:991302-991472:1:exon
so has part: feature:991667-991819:1:exon
so has part: feature:992082-992228:1:exon
so has part: feature:992497-992648:1:exon
so has part: feature:993094-993266:1:exon
so has part: feature:993377-993467:1:exon
so has part: feature:996515-996588:1:exon
so has part: feature:996735-996847:1:exon
so has part: feature:997065-997130:1:exon
so has part: feature:997385-997483:1:exon
so has part: feature:997619-997734:1:exon
so has part: feature:999567-999720:1:exon
so has part: feature:999827-999954:1:exon
so has part: feature:1000111-1000373:1:exon
so has part: feature:1000744-1000862:1:exon
so has part: feature:1001036-1001089:1:exon
so has part: feature:1001174-1001362:1:exon
so has part: feature:1001813-1001880:1:exon
so has part: feature:1006253-1006640:1:exon
so has part: feature:1006932-1007129:1:exon
so has part: feature:1007196-1007291:1:exon
so has part: feature:1009700-1009932:1:exon
so has part: feature:1010968-1011097:1:exon
so has part: feature:1011199-1011328:1:exon
so has part: feature:1011418-1011492:1:exon
so has part: feature:1011737-1011843:1:exon

XP_023837798.1
type: Protein
SIO_000068: ncbiprotein

position:988564:1
position: 988564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011843:1
position: 1011843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988564-988629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989554-989646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:991302-991472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:991667-991819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992082-992228:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:992497-992648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:993094-993266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:993377-993467:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:996515-996588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:996735-996847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:997065-997130:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:997385-997483:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:997619-997734:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:999567-999720:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999827-999954:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1000111-1000373:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1000744-1000862:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1001036-1001089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1001174-1001362:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1001813-1001880:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1006253-1006640:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1006932-1007129:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1007196-1007291:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1009700-1009932:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1010968-1011097:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1011199-1011328:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1011418-1011492:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1011737-1011843:1:exon

LOC111960095
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1019975..1025233)
location: region:1019975-1025233:-1
so has part: feature:1019975-1025233:-1:exon
subclass of: SO_0000010

111960095
type: Gene
SIO_000068: ncbigene

position:1019975:-1
position: 1019975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025233:-1
position: 1025233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019975-1025233:-1:exon

LOC111960095
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960095
product: E3 ubiquitin-protein ligase TRIM39, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023982004.1
SIO_010081: LOC111960095
subclass of: SO_0000673
so part of: LOC111960095
location: complement(join(1019975..1020807,1021185..1021360,1021800..1021826,1022100..1022205,1022894..1023112,1023530..1023628,1023826..1023995,1024306..1024410,1024693..1025233))
location: region:1019975-1025233:-1
so has part: feature:1024693-1025233:-1:exon
so has part: feature:1024306-1024410:-1:exon
so has part: feature:1023826-1023995:-1:exon
so has part: feature:1023530-1023628:-1:exon
so has part: feature:1022894-1023112:-1:exon
so has part: feature:1022100-1022205:-1:exon
so has part: feature:1021800-1021826:-1:exon
so has part: feature:1021185-1021360:-1:exon
so has part: feature:1019975-1020807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1024693-1025233:-1:exon

position:1024693:-1
position: 1024693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1024306-1024410:-1:exon

position:1024306:-1
position: 1024306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024410:-1
position: 1024410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023826-1023995:-1:exon

position:1023826:-1
position: 1023826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023995:-1
position: 1023995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1023530-1023628:-1:exon

position:1023530:-1
position: 1023530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023628:-1
position: 1023628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1022894-1023112:-1:exon

position:1022894:-1
position: 1022894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023112:-1
position: 1023112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1022100-1022205:-1:exon

position:1022100:-1
position: 1022100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022205:-1
position: 1022205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1021800-1021826:-1:exon

position:1021800:-1
position: 1021800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021826:-1
position: 1021826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1021185-1021360:-1:exon

position:1021185:-1
position: 1021185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021360:-1
position: 1021360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1019975-1020807:-1:exon

position:1020807:-1
position: 1020807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960095
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960095
product: E3 ubiquitin-protein ligase TRIM39, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_023982003.2
SIO_010081: LOC111960095
subclass of: SO_0000673
so part of: LOC111960095
location: complement(join(1019975..1020807,1021185..1021360,1021800..1021826,1022100..1022205,1022894..1023112,1023530..1023628,1023826..1023995,1024306..1024410,1024649..1025233))
location: region:1019975-1025233:-1
so has part: feature:1024649-1025233:-1:exon
so has part: feature:1024306-1024410:-1:exon
so has part: feature:1023826-1023995:-1:exon
so has part: feature:1023530-1023628:-1:exon
so has part: feature:1022894-1023112:-1:exon
so has part: feature:1022100-1022205:-1:exon
so has part: feature:1021800-1021826:-1:exon
so has part: feature:1021185-1021360:-1:exon
so has part: feature:1019975-1020807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1024649-1025233:-1:exon

position:1024649:-1
position: 1024649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1024306-1024410:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023826-1023995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023530-1023628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022894-1023112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022100-1022205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1021800-1021826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1021185-1021360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1019975-1020807:-1:exon

LOC111960095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39
translation: MASLSMTKDQLRCSICLDIFVHPVSTPCGHNFCKSCISDYWDIREAICPLCKETFKKRPDLHVNTFINEIINQFKSAQEDIFPHTILPLREPEQGDTTDGGVNRKIQARLKKVEEIKNSVEISRASSQKDIEENEQAFTVLLRSIERSQADVVGEIQEKQRAVEKQADWLIKELEQEVADLESGNNKQGELRSTPQQICSEISASGGGKNIWEIVSQLEDTFREEMKKVMDKGLKLLKTNAVNVILDPDTAHPFLVLSEDGKQARHVNDWRILPFNPKRFNTSIGVLGRTGFSSRRFYFEVQVSGKTDWGLGVARESIDRKGKALPTPAIGYWTLWLTNRYEYKAADDSGSTLLSLREKPQKVGVFVDHKEGLVSFYDSEAKAHIYSFTGCTFNEKLFPFLSSSVNDNDKNSAPFVILPVSHRG
SIO_010081: LOC111960095
subclass of: SO_0000673
so part of: LOC111960095
location: complement(join(1020433..1020807,1021185..1021360,1021800..1021826,1022100..1022205,1022894..1023112,1023530..1023628,1023826..1023995,1024306..1024408))
location: region:1020433-1024408:-1
so has part: feature:1024306-1024408:-1:exon
so has part: feature:1023826-1023995:-1:exon
so has part: feature:1023530-1023628:-1:exon
so has part: feature:1022894-1023112:-1:exon
so has part: feature:1022100-1022205:-1:exon
so has part: feature:1021800-1021826:-1:exon
so has part: feature:1021185-1021360:-1:exon
so has part: feature:1020433-1020807:-1:exon

XP_023837771.1
type: Protein
SIO_000068: ncbiprotein

position:1020433:-1
position: 1020433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024408:-1
position: 1024408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024306-1024408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023826-1023995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023530-1023628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022894-1023112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022100-1022205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1021800-1021826:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1021185-1021360:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1020433-1020807:-1:exon

LOC111960095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39
translation: MASLSMTKDQLRCSICLDIFVHPVSTPCGHNFCKSCISDYWDIREAICPLCKETFKKRPDLHVNTFINEIINQFKSAQEDIFPHTILPLREPEQGDTTDGGVNRKIQARLKKVEEIKNSVEISRASSQKDIEENEQAFTVLLRSIERSQADVVGEIQEKQRAVEKQADWLIKELEQEVADLESGNNKQGELRSTPQQICSEISASGGGKNIWEIVSQLEDTFREEMKKVMDKGLKLLKTNAVNVILDPDTAHPFLVLSEDGKQARHVNDWRILPFNPKRFNTSIGVLGRTGFSSRRFYFEVQVSGKTDWGLGVARESIDRKGKALPTPAIGYWTLWLTNRYEYKAADDSGSTLLSLREKPQKVGVFVDHKEGLVSFYDSEAKAHIYSFTGCTFNEKLFPFLSSSVNDNDKNSAPFVILPVSHRG
SIO_010081: LOC111960095
subclass of: SO_0000673
so part of: LOC111960095
location: complement(join(1020433..1020807,1021185..1021360,1021800..1021826,1022100..1022205,1022894..1023112,1023530..1023628,1023826..1023995,1024306..1024408))
location: region:1020433-1024408:-1
so has part: feature:1024306-1024408:-1:exon
so has part: feature:1023826-1023995:-1:exon
so has part: feature:1023530-1023628:-1:exon
so has part: feature:1022894-1023112:-1:exon
so has part: feature:1022100-1022205:-1:exon
so has part: feature:1021800-1021826:-1:exon
so has part: feature:1021185-1021360:-1:exon
so has part: feature:1020433-1020807:-1:exon

XP_023837772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1024306-1024408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023826-1023995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023530-1023628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022894-1023112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022100-1022205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1021800-1021826:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1021185-1021360:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1020433-1020807:-1:exon

LOC111960373
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1048391..1056413
location: region:1048391-1056413:1
so has part: feature:1048391-1056413:1:exon
subclass of: SO_0000010

111960373
type: Gene
SIO_000068: ncbigene

position:1048391:1
position: 1048391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056413:1
position: 1056413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048391-1056413:1:exon

LOC111960373
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960373
product: uncharacterized LOC111960373, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023982347.1
SIO_010081: LOC111960373
subclass of: SO_0000673
so part of: LOC111960373
location: join(1048391..1048468,1050763..1050854,1055285..1056413)
location: region:1048391-1056413:1
so has part: feature:1048391-1048468:1:exon
so has part: feature:1050763-1050854:1:exon
so has part: feature:1055285-1056413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048391-1048468:1:exon

position:1048468:1
position: 1048468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1050763-1050854:1:exon

position:1050763:1
position: 1050763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050854:1
position: 1050854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1055285-1056413:1:exon

position:1055285:1
position: 1055285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960373
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960373
product: uncharacterized LOC111960373, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023982346.1
SIO_010081: LOC111960373
subclass of: SO_0000673
so part of: LOC111960373
location: join(1048393..1048516,1050763..1050854,1055285..1056413)
location: region:1048393-1056413:1
so has part: feature:1048393-1048516:1:exon
so has part: feature:1050763-1050854:1:exon
so has part: feature:1055285-1056413:1:exon

position:1048393:1
position: 1048393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048393-1048516:1:exon

position:1048516:1
position: 1048516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1050763-1050854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055285-1056413:1:exon

LOC111960373
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111960373
translation: MENYTDYYPLYPDDYYYSPDDDYNLPDSGAIVASVLILLGILPVCWIIWFACCKLRERALVTVFLVSLLINDTVQLITSLFVVGIKLMGISCYSSCHALHQLFILSRFCGQIFHLLVALENIFCLSRTRSSTPPGFKLKCFFYLLSAAVWLGYIVIAFLVNVDDMNNYLCYIFLNFFGVLCTAAAACMMILKPLNPTKTSQSLKVLAVAMLTYVILYVPDSLYWIIQHYGPAWTDGFRYDSFFLYLPCLRPITDCVLCWYICRAHRIEWNEVGILPNSLTLDSSHSVVTFSNCIGRGPLGGTSNTGG
SIO_010081: LOC111960373
subclass of: SO_0000673
so part of: LOC111960373
location: 1055330..1056253
location: region:1055330-1056253:1
so has part: feature:1055330-1056253:1:exon

XP_023838114.1
type: Protein
SIO_000068: ncbiprotein

position:1055330:1
position: 1055330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056253:1
position: 1056253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055330-1056253:1:exon

LOC111960373
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111960373
translation: MENYTDYYPLYPDDYYYSPDDDYNLPDSGAIVASVLILLGILPVCWIIWFACCKLRERALVTVFLVSLLINDTVQLITSLFVVGIKLMGISCYSSCHALHQLFILSRFCGQIFHLLVALENIFCLSRTRSSTPPGFKLKCFFYLLSAAVWLGYIVIAFLVNVDDMNNYLCYIFLNFFGVLCTAAAACMMILKPLNPTKTSQSLKVLAVAMLTYVILYVPDSLYWIIQHYGPAWTDGFRYDSFFLYLPCLRPITDCVLCWYICRAHRIEWNEVGILPNSLTLDSSHSVVTFSNCIGRGPLGGTSNTGG
SIO_010081: LOC111960373
subclass of: SO_0000673
so part of: LOC111960373
location: 1055330..1056253
location: region:1055330-1056253:1
so has part: feature:1055330-1056253:1:exon

XP_023838115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1055330-1056253:1:exon

LOC111960429
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1073955..1086014
location: region:1073955-1086014:1
so has part: feature:1073955-1086014:1:exon
subclass of: SO_0000011

111960429
type: Gene
SIO_000068: ncbigene

position:1073955:1
position: 1073955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086014:1
position: 1086014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073955-1086014:1:exon

LOC111960429
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111960429
product: uncharacterized LOC111960429
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_002876841.1
SIO_010081: LOC111960429
subclass of: SO_0000673
so part of: LOC111960429
location: join(1073955..1074184,1079664..1079756,1085301..1086014)
location: region:1073955-1086014:1
so has part: feature:1073955-1074184:1:exon
so has part: feature:1079664-1079756:1:exon
so has part: feature:1085301-1086014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073955-1074184:1:exon

position:1074184:1
position: 1074184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1079664-1079756:1:exon

position:1079664:1
position: 1079664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079756:1
position: 1079756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1085301-1086014:1:exon

position:1085301:1
position: 1085301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960036
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1107943..1114607
location: region:1107943-1114607:1
so has part: feature:1107943-1114607:1:exon

111960036
type: Gene
SIO_000068: ncbigene

position:1107943:1
position: 1107943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114607:1
position: 1114607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107943-1114607:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1107943..1107980
location: region:1107943-1107980:1
so has part: feature:1107943-1107980:1:exon

position:1107980:1
position: 1107980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107943-1107980:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1108379..1108417
location: region:1108379-1108417:1
so has part: feature:1108379-1108417:1:exon

position:1108379:1
position: 1108379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108417:1
position: 1108417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108379-1108417:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1108792..1109077
location: region:1108792-1109077:1
so has part: feature:1108792-1109077:1:exon

position:1108792:1
position: 1108792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109077:1
position: 1109077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108792-1109077:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1109763..1109924
location: region:1109763-1109924:1
so has part: feature:1109763-1109924:1:exon

position:1109763:1
position: 1109763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109924:1
position: 1109924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109763-1109924:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1110136..1110158
location: region:1110136-1110158:1
so has part: feature:1110136-1110158:1:exon

position:1110136:1
position: 1110136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110158:1
position: 1110158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110136-1110158:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1110740..1110977
location: region:1110740-1110977:1
so has part: feature:1110740-1110977:1:exon

position:1110740:1
position: 1110740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110977:1
position: 1110977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110740-1110977:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1113327..1113478
location: region:1113327-1113478:1
so has part: feature:1113327-1113478:1:exon

position:1113327:1
position: 1113327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113478:1
position: 1113478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113327-1113478:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1113882..1113973
location: region:1113882-1113973:1
so has part: feature:1113882-1113973:1:exon

position:1113882:1
position: 1113882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113973:1
position: 1113973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113882-1113973:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1114064..1114181
location: region:1114064-1114181:1
so has part: feature:1114064-1114181:1:exon

position:1114064:1
position: 1114064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114181:1
position: 1114181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114064-1114181:1:exon

LOC111960036
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111960036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111960036
subclass of: SO_0000673
so part of: LOC111960036
location: 1114516..1114607
location: region:1114516-1114607:1
so has part: feature:1114516-1114607:1:exon

position:1114516:1
position: 1114516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114516-1114607:1:exon

LOC111960128
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1122193..1140820)
location: region:1122193-1140820:-1
so has part: feature:1122193-1140820:-1:exon
subclass of: SO_0000010

111960128
type: Gene
SIO_000068: ncbigene

position:1122193:-1
position: 1122193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140820:-1
position: 1140820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1122193-1140820:-1:exon

LOC111960128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960128
product: pentraxin fusion protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982032.1
SIO_010081: LOC111960128
subclass of: SO_0000673
so part of: LOC111960128
location: complement(join(1122193..1122293,1122683..1122849,1123339..1123618,1124110..1124255,1126328..1126598,1140748..1140820))
location: region:1122193-1140820:-1
so has part: feature:1140748-1140820:-1:exon
so has part: feature:1126328-1126598:-1:exon
so has part: feature:1124110-1124255:-1:exon
so has part: feature:1123339-1123618:-1:exon
so has part: feature:1122683-1122849:-1:exon
so has part: feature:1122193-1122293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140748-1140820:-1:exon

position:1140748:-1
position: 1140748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1126328-1126598:-1:exon

position:1126328:-1
position: 1126328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126598:-1
position: 1126598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1124110-1124255:-1:exon

position:1124110:-1
position: 1124110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124255:-1
position: 1124255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1123339-1123618:-1:exon

position:1123339:-1
position: 1123339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123618:-1
position: 1123618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1122683-1122849:-1:exon

position:1122683:-1
position: 1122683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122849:-1
position: 1122849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1122193-1122293:-1:exon

position:1122293:-1
position: 1122293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentraxin fusion protein-like
translation: MEGDVFHLELQLLQAKTKLNFSRIYNVALRGVAAQSSQFSDRDAHYAIDGYRNTNYGSCTHTTQQTNPWWRVDLLDVYKVTAVTITNRDEVPERLDGAEIRIGNSLENNGINNPRCVVISHIPARETYTFQCNKMEGRYVVVVVPDRKEYLTLCELEVYGTPAVNVALKGVASQSSLNGYGNAHNAIDGNRESDYYKRSCTHTAQETNPWWRVDLLDVYRVTAVSITNRGDDVPNRLDGAEIRIGNSLENNGINNPRCVIISHIPAGKTYTFQCNAMEGRYVVVVIPGQNKVLTLCEVEVFATVKTPESSTEAPKSKRTVVRMKIQSDADLTNQAVGDQLLQQVR
SIO_010081: LOC111960128
subclass of: SO_0000673
so part of: LOC111960128
location: complement(join(1122193..1122293,1122683..1122849,1123339..1123618,1124110..1124255,1126328..1126598,1140748..1140820))
location: region:1122193-1140820:-1
so has part: feature:1140748-1140820:-1:exon
so has part: feature:1126328-1126598:-1:exon
so has part: feature:1124110-1124255:-1:exon
so has part: feature:1123339-1123618:-1:exon
so has part: feature:1122683-1122849:-1:exon
so has part: feature:1122193-1122293:-1:exon

XP_023837800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1140748-1140820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1126328-1126598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124110-1124255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1123339-1123618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1122683-1122849:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1122193-1122293:-1:exon

LOC111960018
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1153264..1168584
location: region:1153264-1168584:1
so has part: feature:1153264-1168584:1:exon
subclass of: SO_0000010

111960018
type: Gene
SIO_000068: ncbigene

position:1153264:1
position: 1153264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168584:1
position: 1168584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153264-1168584:1:exon

LOC111960018
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960018
product: sterile alpha motif domain-containing protein 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023981884.1
SIO_010081: LOC111960018
subclass of: SO_0000673
so part of: LOC111960018
location: join(1153264..1153401,1153539..1153589,1158486..1161433,1161759..1161794,1167771..1168584)
location: region:1153264-1168584:1
so has part: feature:1153264-1153401:1:exon
so has part: feature:1153539-1153589:1:exon
so has part: feature:1158486-1161433:1:exon
so has part: feature:1161759-1161794:1:exon
so has part: feature:1167771-1168584:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1153264-1153401:1:exon

position:1153401:1
position: 1153401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153539-1153589:1:exon

position:1153539:1
position: 1153539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153589:1
position: 1153589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1158486-1161433:1:exon

position:1158486:1
position: 1158486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161433:1
position: 1161433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1161759-1161794:1:exon

position:1161759:1
position: 1161759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161794:1
position: 1161794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1167771-1168584:1:exon

position:1167771:1
position: 1167771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha motif domain-containing protein 9-like
translation: MAHNKGSSLSNAHGREIYVGSQIRDSISLLNVLYANAFEEEDIDSAVAKKTEVDFYRGAPPQWLNFYWAERATSPDNTTPFIKRDGYTELIENIMKRRKGDLTSTMNLLHQPGSGGTTLAKQVLWDMRKKLRCAVLTGATSDITAIAKQVIHLFTAGGQGQQNTVLLLLEDVFIQKNLQNAIMKEITDRNITTHMPVVIILNCVRKAVIKQEDHNNSRNVFLRTELSEAEKKQFEEKQIEISRSYINEHKQFHGFNIMQSNFSGDDVKETCAFLDVRKNRRPKKSQLLAFLSLVNVYVPGSHLRQSQCQAFLGPPDPIYGGPSFEQRMEPFTHLIVTFPSQQGQDKHVRMAHPLIAQQCVELLATAGVTRSDTARNFLTDFCREEVQQHLMSVIKDMLTKREITVGDKQNAEWKQDMLTKGEMREERKGKFSRLIQDIEHTEGTDSKSKCVSVLQLASKKFKQNPFFPQALARFFYIVKRDYSKAEKWAKIAKDRDPNNSFVADTLGQVYKNHLMSRMKVEQSSFRVPEQLGSISAQEILQLSKKAFEAFKDEERAAENEQGADMQYDGINKVSHIYNNRGLFGYLQVANIVFDSLVSLDKNWQKVLTMEISADSFFISIGQKKLFKYKPLIISLRDEVERKCEFFDSYFTYSKPSMKKDEPHYFQTDVKNCYCKYVGTCTPIHSESAIDVPLQKLKEEMAITFPGLLSCLDKGYDKTHLRRITTLWGKIKKIKNTKDGDNKASQNFILANIILSKVEAASPMLTPLPILRSILERHLVANLGNQTPEFYFLVLLLFWPEEHKKMAFNIDLNKCVQEMQDSYNNTYKKHLRSRYLLPLIFLGKGESLSRLVHRSKIEKLLVEESGEVWRKPSVQDLLLPVNGVVRQHRVFARVDGKEIEVSADQQSKVWKSGGVCFYLGFTIRGPVAYDIHYPSHSDRNKEEDPRKMLEVPDIKLIKDRACEKLNNMPM
SIO_010081: LOC111960018
subclass of: SO_0000673
so part of: LOC111960018
location: join(1158558..1161433,1161759..1161792)
location: region:1158558-1161792:1
so has part: feature:1158558-1161433:1:exon
so has part: feature:1161759-1161792:1:exon

XP_023837652.1
type: Protein
SIO_000068: ncbiprotein

position:1158558:1
position: 1158558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161792:1
position: 1161792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158558-1161433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1161759-1161792:1:exon

LOC111960022
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1194860..1200425
location: region:1194860-1200425:1
so has part: feature:1194860-1200425:1:exon
subclass of: SO_0000010

111960022
type: Gene
SIO_000068: ncbigene

position:1194860:1
position: 1194860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200425:1
position: 1200425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194860-1200425:1:exon

LOC111960022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960022
product: zinc finger protein 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_023981889.2
SIO_010081: LOC111960022
subclass of: SO_0000673
so part of: LOC111960022
location: join(1194860..1194973,1198306..1200074,1200160..1200425)
location: region:1194860-1200425:1
so has part: feature:1194860-1194973:1:exon
so has part: feature:1198306-1200074:1:exon
so has part: feature:1200160-1200425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194860-1194973:1:exon

position:1194973:1
position: 1194973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1198306-1200074:1:exon

position:1198306:1
position: 1198306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200074:1
position: 1200074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1200160-1200425:1:exon

position:1200160:1
position: 1200160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 2 homolog
translation: MEKVSHEYLHCKLPHTDTEMDSPRASGPEPLVATVDTGQITSKPNWSQVKXEDGETEWDCFLQEYLTNQKRQDGMFGNSLDICINMPEEEDAGLDLLEDQPHNSESLXEVECVSNSVSTSETGTSRGDTSPKTQKPTWGPDLTQYGNCSTKSNRECVNIKPSREHCARTDQQQSDXSESVVTKSSLVIVELDKRVRMEQSRDQSQRKCTGRYDKESVMRSNAHPFIRDMPQCYVQCGKRLSKADILKIQQQTRMRGRHKCDTCGKTFTKSTYLKXHILTHTGERPHGCKLCGKRFTQSSHLNTHMRRHTGLKPFSCPVCXKTFIDSKSCXIHQRTHTGEKPYPCSQCGQAFSQTGNLKKHMMAFHSTDGAXKPHRCTTCDRGFMSLTELNVHKLLHSGLKPHCCSECGKSFRLQSHLKDHQRVHTGAKPFSCNVCGSKFSNYTTWSRHKQIHTGNKPQECSQCGLRFRCPGTLKTHQRTHTKEKPYTCSLPDCGKRFSHALSLQRHVRTHTGEKPFACSTCDYRAADKSSLRTHEXRHTGVKPYYCDECGKSFLLPKEXNIHQRIHTGEKPYHCDICGKDFAQLSNMKTHQQTHIKEKPYACSFPDRS
SIO_010081: LOC111960022
subclass of: SO_0000673
so part of: LOC111960022
location: join(1194955..1194973,1198306..1200074,1200160..1200198)
location: region:1194955-1200198:1
so has part: feature:1194955-1194973:1:exon
so has part: feature:1198306-1200074:1:exon
so has part: feature:1200160-1200198:1:exon

XP_023837657.1
type: Protein
SIO_000068: ncbiprotein

position:1194955:1
position: 1194955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200198:1
position: 1200198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194955-1194973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198306-1200074:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1200160-1200198:1:exon

LOC111960013
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1200523..1223174)
location: region:1200523-1223174:-1
so has part: feature:1200523-1223174:-1:exon
subclass of: SO_0000010

111960013
type: Gene
SIO_000068: ncbigene

position:1200523:-1
position: 1200523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223174:-1
position: 1223174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200523-1223174:-1:exon

LOC111960013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960013
product: sterile alpha motif domain-containing protein 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023981880.2
SIO_010081: LOC111960013
subclass of: SO_0000673
so part of: LOC111960013
location: complement(join(1200523..1201578,1201680..1201815,1201936..1202061,1202620..1202870,1202987..1203198,1203514..1203575,1205200..1205237,1207848..1210863,1223121..1223174))
location: region:1200523-1223174:-1
so has part: feature:1223121-1223174:-1:exon
so has part: feature:1207848-1210863:-1:exon
so has part: feature:1205200-1205237:-1:exon
so has part: feature:1203514-1203575:-1:exon
so has part: feature:1202987-1203198:-1:exon
so has part: feature:1202620-1202870:-1:exon
so has part: feature:1201936-1202061:-1:exon
so has part: feature:1201680-1201815:-1:exon
so has part: feature:1200523-1201578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1223121-1223174:-1:exon

position:1223121:-1
position: 1223121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1207848-1210863:-1:exon

position:1207848:-1
position: 1207848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210863:-1
position: 1210863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1205200-1205237:-1:exon

position:1205200:-1
position: 1205200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205237:-1
position: 1205237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1203514-1203575:-1:exon

position:1203514:-1
position: 1203514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203575:-1
position: 1203575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1202987-1203198:-1:exon

position:1202987:-1
position: 1202987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203198:-1
position: 1203198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1202620-1202870:-1:exon

position:1202620:-1
position: 1202620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202870:-1
position: 1202870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1201936-1202061:-1:exon

position:1201936:-1
position: 1201936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202061:-1
position: 1202061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1201680-1201815:-1:exon

position:1201680:-1
position: 1201680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201815:-1
position: 1201815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1200523-1201578:-1:exon

position:1201578:-1
position: 1201578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha motif domain-containing protein 9-like
translation: MAHNKGSSLSNARGRESYVGSEIRDSISLLDVLYANAFEEEDIDSAVAKETEVDFYRGAPPQWLNFYWAERATSADKTTPFIKRDGYTELMENIKKQCKGDLTSTMNLLHQPGSGGTTLAMQVLWDMRKTMRCAVLTGPTSDITAIAKQVIHLFTAGGQGQQNTVLLMLEDERILENLQDAIIKEIAERNITTHMPVVILLNCMRKAVIKQEYHNKSRHVILRMELSEAEKQQFEEKQIEISRSYINEHKQFHGFNIMQSNFCRDYVKETCAFLDVRKKRRPKNSQLLAFLSLVNAYVPGSHLLQSQCQAFLGPPDPIYGGPSFEQRMEPFTQLIVTFPARQGQDKHVCMAHSLIAQQCVELLAMAGVTRSDTATAFLIDFCGEEVQQHLMPVIKDMLTKREITVDHQQNAGNETQDLFSQKCALQNKLTKREMGEERTDTFSRLIHDIEAKESKSNCVSVLRLASEKITQNPFFPQALARFFCLRMGEYGVGEQWAKIAKDRDPKNSFVADTLGQVYKTHLKSRVYDPSISAQDILQLAEKAFEAFKDVERAAENEQGADMQDDGMTKVSHIFNNRGLFGYLQVANIVFDSLVSLDKNWQKVLTMEISAESFFISIRQKKLFKYKPLISSLRDEVERKCEFFDGYLTYSKPNIKKNEPHYFQTDVKNCYHKYVGTCTPIHSESAIGVPLQKLKEEMAIAFPGLLCCLDKGYDESNLSRITKLWXEIQECEKKKDGGGENKAAQNFILANIILSKVEAASPMLTPLPILRSILERNLLANFGNQTPEFYLLVLLLFWPEEHKKMGFNIDLNKCVLEMQDSYNNTYKKHLRSRYLRPLIFLGRGEGLSRLVHRSKIDNLLARENPMAGPEERPDFIDQKWSSGEVWREPSVQDLLLPVIGVVRQHRVIACVDGKEIKVCADQRSKVWKPGDVCFYLGFTIRGPVAYGIQYPSHHGHFFHSDRMTGGVPRKMLEVPDIKSIKDGPVRSCTTCANVMESTNWVQVEPAVFTEEGPMFSMSPLGRYECRVSGLRWVCKDHVNLKYQFSSWEPHSAMMKRLGYKQGGPLLDVTIVAGKLEEVHLPHFACFGDDPSFKEKVRVLHVEDCGVSLEQVDEVTRFHVKIXHPXFSPKGVLVRSGFPVKAHCDLXLYXAKXAFLTLHAYLVPCDSSVEQAMKKKEQSYGYRSIRKPQPVKSLRMKDWFSLTTSPSAEVKPPNMKLRYDNTKPNFFEVFIKDADVDFSMXLISDVEGXIVWDHTIRRADYRDERTQNSQSKHFVDLHRTDLIQRVSEVDPILDRLLKSGVITXNGYSDVRSERTKQKKMRELFDGPLTGCGPKGKDIFLEILKEQEPFLIRELKGE
SIO_010081: LOC111960013
subclass of: SO_0000673
so part of: LOC111960013
location: complement(join(1201280..1201578,1201680..1201815,1201936..1202061,1202620..1202870,1202987..1203198,1203514..1203575,1205200..1205237,1207848..1210791))
location: region:1201280-1210791:-1
so has part: feature:1207848-1210791:-1:exon
so has part: feature:1205200-1205237:-1:exon
so has part: feature:1203514-1203575:-1:exon
so has part: feature:1202987-1203198:-1:exon
so has part: feature:1202620-1202870:-1:exon
so has part: feature:1201936-1202061:-1:exon
so has part: feature:1201680-1201815:-1:exon
so has part: feature:1201280-1201578:-1:exon

XP_023837648.1
type: Protein
SIO_000068: ncbiprotein

position:1201280:-1
position: 1201280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210791:-1
position: 1210791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207848-1210791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205200-1205237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1203514-1203575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202987-1203198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1202620-1202870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1201936-1202061:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1201680-1201815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1201280-1201578:-1:exon

LOC111960035
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1254498..1293479)
location: region:1254498-1293479:-1
so has part: feature:1254498-1293479:-1:exon
subclass of: SO_0000010

111960035
type: Gene
SIO_000068: ncbigene

position:1254498:-1
position: 1254498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293479:-1
position: 1293479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254498-1293479:-1:exon

LOC111960035
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960035
product: sterile alpha motif domain-containing protein 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_024134940.1
SIO_010081: LOC111960035
subclass of: SO_0000673
so part of: LOC111960035
location: complement(join(1254498..1255343,1277574..1277609,1277716..1277851,1277969..1278097,1282540..1282790,1282906..1283117,1283456..1283517,1287038..1287075,1287600..1290438,1293304..1293479))
location: region:1254498-1293479:-1
so has part: feature:1293304-1293479:-1:exon
so has part: feature:1287600-1290438:-1:exon
so has part: feature:1287038-1287075:-1:exon
so has part: feature:1283456-1283517:-1:exon
so has part: feature:1282906-1283117:-1:exon
so has part: feature:1282540-1282790:-1:exon
so has part: feature:1277969-1278097:-1:exon
so has part: feature:1277716-1277851:-1:exon
so has part: feature:1277574-1277609:-1:exon
so has part: feature:1254498-1255343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1293304-1293479:-1:exon

position:1293304:-1
position: 1293304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287600-1290438:-1:exon

position:1287600:-1
position: 1287600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290438:-1
position: 1290438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1287038-1287075:-1:exon

position:1287038:-1
position: 1287038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287075:-1
position: 1287075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1283456-1283517:-1:exon

position:1283456:-1
position: 1283456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283517:-1
position: 1283517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1282906-1283117:-1:exon

position:1282906:-1
position: 1282906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283117:-1
position: 1283117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1282540-1282790:-1:exon

position:1282540:-1
position: 1282540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282790:-1
position: 1282790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1277969-1278097:-1:exon

position:1277969:-1
position: 1277969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278097:-1
position: 1278097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1277716-1277851:-1:exon

position:1277716:-1
position: 1277716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277851:-1
position: 1277851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1277574-1277609:-1:exon

position:1277574:-1
position: 1277574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277609:-1
position: 1277609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1254498-1255343:-1:exon

position:1255343:-1
position: 1255343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha motif domain-containing protein 9-like
translation: MAHNKGSSLSNARGRESFVGSQIRDSISLLDVLYSNAFEEEDIDSAVAKKTEVDFYRGAPPQWLNFYWTERATSADKTTPFIKRDGYTELIQNIKKQCKGDLTSTMNLLHQPGSGGTTLAKQVLWDMRKTLRCAVLTGATSDITAIAKQVIHLFTAGGQGQQNTVLLMLEDERILENLQDAIIKEIAERNITTHMPVVIILNCVRKPVIKQEDHNNSRNVFLRTELSEAEKQQFEEKQIEISRSYSNEHKQFHGFNIMRXNFSGDYVKETCAFLNVRKKGRPKNSQLLAFLSLVNAYVXGSHLLQSQCQAFLGPPDPIYGGPSFEQRMEPFTHLIVTFPARQGQDKHVCMAHSLIAQQCVKVLATAGVTRSDTARNFLTEFCREEVQQFLVQDMLTKREMGEERKDTFSRLIQDIEGEESKSNVVSVLQLASEIFKQNPFLPQNLARFLYIERRAYFKAEKWAKIAKDRDPNSSFVADTLGQVYKNQLKSRVHDPSIFAQEILQLSKKAFDAFRDEERAAENEQGADMQDDGMTKVSQIFNNRGLFGYLQVANIVFDSLVSLDNNWQKVLTMEISADTFFVSIRQKKLFKYKPLIISLRDEVERKCEFFDGYLTYSKPSIEKDEPHYFQTDVKNCYCKYVGTCTPIHSESSIGVPLQKLKEEMAIAFPGLLSCLDKGYDKTHLRRITILWEEIKKEWEKKKDGGGENKAAQNFILANIILSKVEAASPMLTPLPILRSILERHLLANFGNQTPEFYFLVLLLFWPEEYKKMGFNVDLNKCVQEMQESYKNTYKKHLRSRYLRPLIFLGKGEGLSRLVHRSKIEKLLARENPMAGPDFIDQKWSSGEVWSEPSVQDLLLPVNGVVRQRRVFARVDGKEIEVCAEQRRKVWKSEDVCFYLGFTIRGPVAYGIQYPSHHRYVFYSGPVRSCTTCANVMESTNWVQVEPVAITKEAPMFSTSPPGRYECRVSGLRWVCKDHVSLQYQFSSWEPHRAMMKSLGYKQGGPLLDVTVISGELEEVQLPHFACFGDDPSFKEKVRVLHVEDCGVSXEQVDEVTRFHVKIXHPXFSPKGVLVRSGFPLKAHCDLXLYXAKXAFLTLHAYLVPCDSSVEQAMKKKEQSYGYRSIRKPQPVKSLRMKDWFSLTTSSPSAEVKPPKMKLRYDNTTPNFFEVFMEDADVDFGMKLISDVEGEIVWDHTIRKADYRHKTTQNSQNLHFVDLHRTDLIQRVCLVKPILDXILXNRVIXDEGYSTVMAKRTTQDQMRELYMGPLRASGIRAKHIFYEILKELEPLLIKELEGE
SIO_010081: LOC111960035
subclass of: SO_0000673
so part of: LOC111960035
location: complement(join(1255081..1255343,1277574..1277609,1277716..1277851,1277969..1278097,1282540..1282790,1282906..1283117,1283456..1283517,1287038..1287075,1287600..1290366))
location: region:1255081-1290366:-1
so has part: feature:1287600-1290366:-1:exon
so has part: feature:1287038-1287075:-1:exon
so has part: feature:1283456-1283517:-1:exon
so has part: feature:1282906-1283117:-1:exon
so has part: feature:1282540-1282790:-1:exon
so has part: feature:1277969-1278097:-1:exon
so has part: feature:1277716-1277851:-1:exon
so has part: feature:1277574-1277609:-1:exon
so has part: feature:1255081-1255343:-1:exon

XP_023990708.1
type: Protein
SIO_000068: ncbiprotein

position:1255081:-1
position: 1255081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290366:-1
position: 1290366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287600-1290366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287038-1287075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283456-1283517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1282906-1283117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1282540-1282790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277969-1278097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1277716-1277851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1277574-1277609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1255081-1255343:-1:exon

LOC111960129
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1303317..>1325472
location: region:1303317-1325472:1
so has part: feature:1303317-1325472:1:exon
subclass of: SO_0000010

111960129
type: Gene
SIO_000068: ncbigene

position:1303317:1
position: 1303317
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1325472:1
position: 1325472
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303317-1325472:1:exon

LOC111960129
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960129
product: periplakin-like
inference: similar to RNA sequence (same species):INSD:GEKT01002485.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 9 bases in 7 codons; deleted 2 bases in 2 codons; added 586 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982034.1
SIO_010081: LOC111960129
subclass of: SO_0000673
so part of: LOC111960129
location: join(<1303317..1303436,1303781..1303836,1308258..1308264,1308307..1308415,1309395..1309501,1310013..1310107,1311770..1311891,1312579..1312725,1313789..1313935,1314683..1314786,1316937..1317094,1317394..1317572,1317770..1317908,1318125..1318321,1319666..1319812,1322193..1322214,1322355..1322435,1322569..1322685,1323185..1323277,1323429..>1325472)
location: region:1303317-1325472:1
so has part: feature:1303317-1303436:1:exon
so has part: feature:1303781-1303836:1:exon
so has part: feature:1308258-1308264:1:exon
so has part: feature:1308307-1308415:1:exon
so has part: feature:1309395-1309501:1:exon
so has part: feature:1310013-1310107:1:exon
so has part: feature:1311770-1311891:1:exon
so has part: feature:1312579-1312725:1:exon
so has part: feature:1313789-1313935:1:exon
so has part: feature:1314683-1314786:1:exon
so has part: feature:1316937-1317094:1:exon
so has part: feature:1317394-1317572:1:exon
so has part: feature:1317770-1317908:1:exon
so has part: feature:1318125-1318321:1:exon
so has part: feature:1319666-1319812:1:exon
so has part: feature:1322193-1322214:1:exon
so has part: feature:1322355-1322435:1:exon
so has part: feature:1322569-1322685:1:exon
so has part: feature:1323185-1323277:1:exon
so has part: feature:1323429-1325472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303317-1303436:1:exon

position:1303436:1
position: 1303436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1303781-1303836:1:exon

position:1303781:1
position: 1303781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303836:1
position: 1303836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1308258-1308264:1:exon

position:1308258:1
position: 1308258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308264:1
position: 1308264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1308307-1308415:1:exon

position:1308307:1
position: 1308307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308415:1
position: 1308415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1309395-1309501:1:exon

position:1309395:1
position: 1309395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1309501:1
position: 1309501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1310013-1310107:1:exon

position:1310013:1
position: 1310013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310107:1
position: 1310107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1311770-1311891:1:exon

position:1311770:1
position: 1311770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1311891:1
position: 1311891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1312579-1312725:1:exon

position:1312579:1
position: 1312579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312725:1
position: 1312725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1313789-1313935:1:exon

position:1313789:1
position: 1313789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313935:1
position: 1313935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1314683-1314786:1:exon

position:1314683:1
position: 1314683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314786:1
position: 1314786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1316937-1317094:1:exon

position:1316937:1
position: 1316937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317094:1
position: 1317094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1317394-1317572:1:exon

position:1317394:1
position: 1317394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317572:1
position: 1317572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1317770-1317908:1:exon

position:1317770:1
position: 1317770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317908:1
position: 1317908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1318125-1318321:1:exon

position:1318125:1
position: 1318125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318321:1
position: 1318321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1319666-1319812:1:exon

position:1319666:1
position: 1319666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319812:1
position: 1319812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1322193-1322214:1:exon

position:1322193:1
position: 1322193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322214:1
position: 1322214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1322355-1322435:1:exon

position:1322355:1
position: 1322355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322435:1
position: 1322435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1322569-1322685:1:exon

position:1322569:1
position: 1322569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322685:1
position: 1322685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1323185-1323277:1:exon

position:1323185:1
position: 1323185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323277:1
position: 1323277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1323429-1325472:1:exon

position:1323429:1
position: 1323429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960129
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960129
inference: similar to RNA sequence (same species):INSD:GEKT01002485.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 9 bases in 7 codons; deleted 2 bases in 2 codons; added 586 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: periplakin-like
translation: LSPPHSRAPSSELSALIEKLQKNADKVEKLILETEQNLNKDVSKINEGKQPLYQDDTNNSSRCTNELYWMDQQAGERIQYDWSDTNLDYPARHRQYENFISKCLESKEXTVTKLNDDGDKLIASNHPGKNVIEAQMEAVHADWKEYLNLLICEEXHLKHMDEYHKFHKEARDTQDLLKRMDKEVDQKYKPEFXDMYQMESLIRDLDDQAKAMDHFDERVKALEKRSLQVLPPQFRRXTPQKLLPVEALCEFDTDEGQILRGERYTLLSNKGPSGRXEDAAGRKLTAPGPASWSPHNPESVAVSNGLASQQKGIKMKVSGSKTTLVKRLEELKKDGSAGSDKEEQQCRQLMAGLDKVTSDLDKQEKAIYSRVRPPLEQTRPLQDSADRLQDVKDIAAVVRKIEPEKSSKVKEAEKFLTSNPKCASAPQLNGKVNEANNKYDKINLLLKCSEDKLQNSNRLENSLQNGKSLLSSYENKLVREEVAPADISSLEKTQRQLADISSELKTKRSAVTEAEANLRAAKGSCDTMATKVQEHCPDIERQEGEVRKLNKRYDNLNRQIDDTRSQSLQRAKTSYSNYHSDYDNLXQLAVRVPNYEPTEKDNLSQVEPSWNQKSKSSTSIELLSDIKKKESELNNVSKXCSTLQQAVKDYENDTEKFKSILDLEDGLVPQTYKRSRLESPALRVKEEESAIEAKFTEVNAVNKQRMANLQFAQGLMNQQSDVIVSNNVQQVKSAAPGEEAWRIESQLKDEIQRREQLEKDLEKIQTDIYMLEGQKPEDTVVKKEIIKKVPDPTLVDEVHNVRQKLSDETRVTRAMDNELEALRLKLRGIETEIKEGAQQYTVKEVLRIERDRGQEEEVRRLREELEELRRKKTIKDNEVIQITKQVTLLAQQKSKEQEVITEEEVIKVQNDPQLENEYRILLDRKQKEQEARKQLEDELRFLQDKLRRLEKEKSMAEEKISIKEVLKVEKDIAFEREVENLRMQHEDEKSKHRSSQRERADLQRKISSLEEEKSRVIVQEKVREIVRPDPKAEAEVANLRMELVEHQRRYRDADQQLKSHQDELKMLRNRGPQIEIKEIIKEVIKYKTDPQTERELEKLRNEIVDKTHQTEKSEMEIRQLRDEIQRWKDTKPQVQIKEVVNEVLEYKENPKTKEEIEILKRKLADEQKKRLDLERERSANEEKIRLRKIDLSQVREKVVQQEVVKIEEDPLLRSECSTFTQNINNEQRQRETLKEELIQLQRQKANLDAQLEELERERRARRDAELEIQRLRVRLNEMEVRDKENRERVTVKQMVVLQQDPQQEKEHSILKLQVEEERHKRTLLEKELNVLLQQQVTLERTVVKEKVVRTETIQVEKDPEAELEIEKMTRTLEQEKRRRLELDQELGSLKSRLSDMEFTNTKSSKELDYIRDESSRLQQENQRLQNDIRRLQSEIQITSTETRSISNSAPMESGKNLELRLDSLQRELADLRAITSQKDEEIEKLQRGLSAIQIKREQRESHLRRSIVVIDPDSGKEMRPEEAYKLGLIDWKMFVNLQSQECDWEEISVKGPKGESSVLHDRKSGKKFSIEDALRAGNITNRQLQQYRDKEITI
SIO_010081: LOC111960129
subclass of: SO_0000673
so part of: LOC111960129
location: join(<1303317..1303436,1303781..1303836,1308258..1308264,1308307..1308415,1309395..1309501,1310013..1310107,1311770..1311891,1312579..1312725,1313789..1313935,1314683..1314786,1316937..1317094,1317394..1317572,1317770..1317908,1318125..1318321,1319666..1319812,1322193..1322214,1322355..1322435,1322569..1322685,1323185..1323277,1323429..>1325472)
location: region:1303317-1325472:1
so has part: feature:1303317-1303436:1:exon
so has part: feature:1303781-1303836:1:exon
so has part: feature:1308258-1308264:1:exon
so has part: feature:1308307-1308415:1:exon
so has part: feature:1309395-1309501:1:exon
so has part: feature:1310013-1310107:1:exon
so has part: feature:1311770-1311891:1:exon
so has part: feature:1312579-1312725:1:exon
so has part: feature:1313789-1313935:1:exon
so has part: feature:1314683-1314786:1:exon
so has part: feature:1316937-1317094:1:exon
so has part: feature:1317394-1317572:1:exon
so has part: feature:1317770-1317908:1:exon
so has part: feature:1318125-1318321:1:exon
so has part: feature:1319666-1319812:1:exon
so has part: feature:1322193-1322214:1:exon
so has part: feature:1322355-1322435:1:exon
so has part: feature:1322569-1322685:1:exon
so has part: feature:1323185-1323277:1:exon
so has part: feature:1323429-1325472:1:exon

XP_023837802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1303317-1303436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1303781-1303836:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1308258-1308264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1308307-1308415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1309395-1309501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1310013-1310107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1311770-1311891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1312579-1312725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1313789-1313935:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1314683-1314786:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1316937-1317094:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1317394-1317572:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1317770-1317908:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1318125-1318321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1319666-1319812:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1322193-1322214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1322355-1322435:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1322569-1322685:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1323185-1323277:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1323429-1325472:1:exon

LOC111960130
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1325531..1373861)
location: region:1325531-1373861:-1
so has part: feature:1325531-1373861:-1:exon
subclass of: SO_0000010

111960130
type: Gene
SIO_000068: ncbigene

position:1325531:-1
position: 1325531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373861:-1
position: 1373861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325531-1373861:-1:exon

LOC111960130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960130
product: astrocytic phosphoprotein PEA-15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023982035.1
SIO_010081: LOC111960130
subclass of: SO_0000673
so part of: LOC111960130
location: complement(join(1325531..1325695,1326298..1326479,1326798..1326972,1373470..1373861))
location: region:1325531-1373861:-1
so has part: feature:1373470-1373861:-1:exon
so has part: feature:1326798-1326972:-1:exon
so has part: feature:1326298-1326479:-1:exon
so has part: feature:1325531-1325695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373470-1373861:-1:exon

position:1373470:-1
position: 1373470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1326798-1326972:-1:exon

position:1326798:-1
position: 1326798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326972:-1
position: 1326972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1326298-1326479:-1:exon

position:1326298:-1
position: 1326298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326479:-1
position: 1326479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1325531-1325695:-1:exon

position:1325695:-1
position: 1325695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: astrocytic phosphoprotein PEA-15
translation: MSEYSSLLSDLSENITNEDLDQLKSACKEDITEDQSNTITSSKEWFNYLEENQKLAQDNLSYIEHIFEISRRPDLLTRVIEYRTTVLKISEDDEIDTKLTRIPSAKKYKGHFTIPIFSSSKELDYIRDESSRLQQENQRLQNDIRRLQSEIQITSTETRSISNSAPMESGRT
SIO_010081: LOC111960130
subclass of: SO_0000673
so part of: LOC111960130
location: complement(join(1325531..1325695,1326298..1326479,1326798..1326969))
location: region:1325531-1326969:-1
so has part: feature:1326798-1326969:-1:exon
so has part: feature:1326298-1326479:-1:exon
so has part: feature:1325531-1325695:-1:exon

XP_023837803.1
type: Protein
SIO_000068: ncbiprotein

position:1326969:-1
position: 1326969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326798-1326969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1326298-1326479:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1325531-1325695:-1:exon

LOC111960032
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1412933..1457652
location: region:1412933-1457652:1
so has part: feature:1412933-1457652:1:exon
subclass of: SO_0000010

111960032
type: Gene
SIO_000068: ncbigene

position:1412933:1
position: 1412933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457652:1
position: 1457652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1412933-1457652:1:exon

LOC111960032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960032
product: calsequestrin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_023981903.2
SIO_010081: LOC111960032
subclass of: SO_0000673
so part of: LOC111960032
location: join(1412933..1413473,1439856..1439888,1441854..1441947,1446219..1446319,1446585..1446696,1446977..1447050,1447354..1447484,1447731..1447776,1447895..1447949,1448230..1448330,1456960..1457034,1457325..1457652)
location: region:1412933-1457652:1
so has part: feature:1412933-1413473:1:exon
so has part: feature:1439856-1439888:1:exon
so has part: feature:1441854-1441947:1:exon
so has part: feature:1446219-1446319:1:exon
so has part: feature:1446585-1446696:1:exon
so has part: feature:1446977-1447050:1:exon
so has part: feature:1447354-1447484:1:exon
so has part: feature:1447731-1447776:1:exon
so has part: feature:1447895-1447949:1:exon
so has part: feature:1448230-1448330:1:exon
so has part: feature:1456960-1457034:1:exon
so has part: feature:1457325-1457652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1412933-1413473:1:exon

position:1413473:1
position: 1413473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1439856-1439888:1:exon

position:1439856:1
position: 1439856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439888:1
position: 1439888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1441854-1441947:1:exon

position:1441854:1
position: 1441854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441947:1
position: 1441947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1446219-1446319:1:exon

position:1446219:1
position: 1446219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446319:1
position: 1446319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1446585-1446696:1:exon

position:1446585:1
position: 1446585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446696:1
position: 1446696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1446977-1447050:1:exon

position:1446977:1
position: 1446977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447050:1
position: 1447050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1447354-1447484:1:exon

position:1447354:1
position: 1447354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447484:1
position: 1447484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1447731-1447776:1:exon

position:1447731:1
position: 1447731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447776:1
position: 1447776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1447895-1447949:1:exon

position:1447895:1
position: 1447895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447949:1
position: 1447949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1448230-1448330:1:exon

position:1448230:1
position: 1448230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448330:1
position: 1448330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1456960-1457034:1:exon

position:1456960:1
position: 1456960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457034:1
position: 1457034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1457325-1457652:1:exon

position:1457325:1
position: 1457325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960032
product: calsequestrin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_023981904.2
SIO_010081: LOC111960032
subclass of: SO_0000673
so part of: LOC111960032
location: join(1412934..1413473,1441854..1441947,1446219..1446319,1446585..1446696,1446977..1447050,1447354..1447484,1447731..1447776,1447895..1447949,1448230..1448330,1456960..1457034,1457325..1457652)
location: region:1412934-1457652:1
so has part: feature:1412934-1413473:1:exon
so has part: feature:1441854-1441947:1:exon
so has part: feature:1446219-1446319:1:exon
so has part: feature:1446585-1446696:1:exon
so has part: feature:1446977-1447050:1:exon
so has part: feature:1447354-1447484:1:exon
so has part: feature:1447731-1447776:1:exon
so has part: feature:1447895-1447949:1:exon
so has part: feature:1448230-1448330:1:exon
so has part: feature:1456960-1457034:1:exon
so has part: feature:1457325-1457652:1:exon

position:1412934:1
position: 1412934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1412934-1413473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441854-1441947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1446219-1446319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446585-1446696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1446977-1447050:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1447354-1447484:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1447731-1447776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1447895-1447949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448230-1448330:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1456960-1457034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1457325-1457652:1:exon

LOC111960032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsequestrin-1-like isoform X1
translation: MKWGWVFLGALFSLGTLSWGEKGLEIPEYDGKDRVHDLNSKNYKSVMKKYDVMVIYYHAHVENNKNAQKTFEMEELALELLTSPAALTFQLAAQVLDDIDDEDIGFGLVDEKKDLSVAKKLGLDEVESIYIFIDNEIIEYDGELAADTLVEFLYDVIEDPVEIIDNERELKGFHNIDEDIKLVGYFKSEKSPHFIEYDDAAEEFHPFIKFFATFDPKIAKKLNMKLNEVDFYEPFMEEPMTIPGKPYTEAELVDYIEEHDRPTLRKLEPHSMYETWEDDIDGEHIVAFAEEDDPDGFEFLEILKEVARENTDNPDLSIVWIDPDDFPLLVPYWEKTFGIDLGSPQIGVVDVEDADSVWMEMDDDEDMPTADELEDWIEDVLSGKIDPDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDDDDDDE
SIO_010081: LOC111960032
subclass of: SO_0000673
so part of: LOC111960032
location: join(1413237..1413473,1439856..1439888,1441854..1441947,1446219..1446319,1446585..1446696,1446977..1447050,1447354..1447484,1447731..1447776,1447895..1447949,1448230..1448330,1456960..1457034,1457325..1457561)
location: region:1413237-1457561:1
so has part: feature:1413237-1413473:1:exon
so has part: feature:1439856-1439888:1:exon
so has part: feature:1441854-1441947:1:exon
so has part: feature:1446219-1446319:1:exon
so has part: feature:1446585-1446696:1:exon
so has part: feature:1446977-1447050:1:exon
so has part: feature:1447354-1447484:1:exon
so has part: feature:1447731-1447776:1:exon
so has part: feature:1447895-1447949:1:exon
so has part: feature:1448230-1448330:1:exon
so has part: feature:1456960-1457034:1:exon
so has part: feature:1457325-1457561:1:exon

XP_023837671.1
type: Protein
SIO_000068: ncbiprotein

position:1413237:1
position: 1413237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457561:1
position: 1457561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1413237-1413473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1439856-1439888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441854-1441947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446219-1446319:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1446585-1446696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1446977-1447050:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1447354-1447484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1447731-1447776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1447895-1447949:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1448230-1448330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1456960-1457034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1457325-1457561:1:exon

LOC111960032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsequestrin-1-like isoform X2
translation: MKWGWVFLGALFSLGTLSWGEKGLEIPEYDGKDRVHDLNSKNYKSVMKKYDVMVIYYHAHVENNKNAQKTFEMEELALELAAQVLDDIDDEDIGFGLVDEKKDLSVAKKLGLDEVESIYIFIDNEIIEYDGELAADTLVEFLYDVIEDPVEIIDNERELKGFHNIDEDIKLVGYFKSEKSPHFIEYDDAAEEFHPFIKFFATFDPKIAKKLNMKLNEVDFYEPFMEEPMTIPGKPYTEAELVDYIEEHDRPTLRKLEPHSMYETWEDDIDGEHIVAFAEEDDPDGFEFLEILKEVARENTDNPDLSIVWIDPDDFPLLVPYWEKTFGIDLGSPQIGVVDVEDADSVWMEMDDDEDMPTADELEDWIEDVLSGKIDPDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDDDDDDE
SIO_010081: LOC111960032
subclass of: SO_0000673
so part of: LOC111960032
location: join(1413237..1413473,1441854..1441947,1446219..1446319,1446585..1446696,1446977..1447050,1447354..1447484,1447731..1447776,1447895..1447949,1448230..1448330,1456960..1457034,1457325..1457561)
location: region:1413237-1457561:1
so has part: feature:1413237-1413473:1:exon
so has part: feature:1441854-1441947:1:exon
so has part: feature:1446219-1446319:1:exon
so has part: feature:1446585-1446696:1:exon
so has part: feature:1446977-1447050:1:exon
so has part: feature:1447354-1447484:1:exon
so has part: feature:1447731-1447776:1:exon
so has part: feature:1447895-1447949:1:exon
so has part: feature:1448230-1448330:1:exon
so has part: feature:1456960-1457034:1:exon
so has part: feature:1457325-1457561:1:exon

XP_023837672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1413237-1413473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441854-1441947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1446219-1446319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446585-1446696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1446977-1447050:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1447354-1447484:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1447731-1447776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1447895-1447949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448230-1448330:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1456960-1457034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1457325-1457561:1:exon

LOC111960041
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1466106..1515798
location: region:1466106-1515798:1
so has part: feature:1466106-1515798:1:exon
subclass of: SO_0000010

111960041
type: Gene
SIO_000068: ncbigene

position:1466106:1
position: 1466106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515798:1
position: 1515798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466106-1515798:1:exon

LOC111960041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023981928.1
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1466106..1466296,1477770..1477855,1478093..1478128,1478256..1478285,1480504..1480575,1480903..1480929,1481088..1481975)
location: region:1466106-1481975:1
so has part: feature:1466106-1466296:1:exon
so has part: feature:1477770-1477855:1:exon
so has part: feature:1478093-1478128:1:exon
so has part: feature:1478256-1478285:1:exon
so has part: feature:1480504-1480575:1:exon
so has part: feature:1480903-1480929:1:exon
so has part: feature:1481088-1481975:1:exon

position:1481975:1
position: 1481975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466106-1466296:1:exon

position:1466296:1
position: 1466296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1477770-1477855:1:exon

position:1477770:1
position: 1477770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477855:1
position: 1477855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1478093-1478128:1:exon

position:1478093:1
position: 1478093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478128:1
position: 1478128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1478256-1478285:1:exon

position:1478256:1
position: 1478256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478285:1
position: 1478285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1480504-1480575:1:exon

position:1480504:1
position: 1480504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480575:1
position: 1480575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1480903-1480929:1:exon

position:1480903:1
position: 1480903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480929:1
position: 1480929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1481088-1481975:1:exon

position:1481088:1
position: 1481088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X7
translation: MATITMAIATITVGIFGSKPNKQSYNSTAGQENPLQTDTHLKLSPKKDINQARSHEVDVTLDVDTAHPKLKIDGKSLQWTNESPQRNINIANCFNEEPFVSGYTGRALKTYWEVNVKEKDDWVLGVAMATAHRMGPLAFSPTNGFWVIRLSNRQRLKAMEDEEHVLDKGIPDKVGIYLDYQERKVTFFDAEEGSLIYSFINGPSYQDNVRPLFSPWNNDAKPITILSITAT
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1477852..1477855,1478093..1478128,1478256..1478285,1480504..1480575,1480903..1480929,1481088..1481614)
location: region:1477852-1481614:1
so has part: feature:1477852-1477855:1:exon
so has part: feature:1478093-1478128:1:exon
so has part: feature:1478256-1478285:1:exon
so has part: feature:1480504-1480575:1:exon
so has part: feature:1480903-1480929:1:exon
so has part: feature:1481088-1481614:1:exon

XP_023837696.1
type: Protein
SIO_000068: ncbiprotein

position:1477852:1
position: 1477852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481614:1
position: 1481614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1477852-1477855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478093-1478128:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1478256-1478285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1480504-1480575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1480903-1480929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1481088-1481614:1:exon

LOC111960041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023981923.1
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1484356..1485044,1486152..1486245,1486696..1486725,1486820..1486849,1498637..1498708,1498901..1498939,1499046..1499072,1499234..1499415,1514951..1515798)
location: region:1484356-1515798:1
so has part: feature:1484356-1485044:1:exon
so has part: feature:1486152-1486245:1:exon
so has part: feature:1486696-1486725:1:exon
so has part: feature:1486820-1486849:1:exon
so has part: feature:1498637-1498708:1:exon
so has part: feature:1498901-1498939:1:exon
so has part: feature:1499046-1499072:1:exon
so has part: feature:1499234-1499415:1:exon
so has part: feature:1514951-1515798:1:exon

position:1484356:1
position: 1484356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1484356-1485044:1:exon

position:1485044:1
position: 1485044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1486152-1486245:1:exon

position:1486152:1
position: 1486152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486245:1
position: 1486245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1486696-1486725:1:exon

position:1486696:1
position: 1486696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486725:1
position: 1486725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1486820-1486849:1:exon

position:1486820:1
position: 1486820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486849:1
position: 1486849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1498637-1498708:1:exon

position:1498637:1
position: 1498637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498708:1
position: 1498708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1498901-1498939:1:exon

position:1498901:1
position: 1498901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498939:1
position: 1498939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1499046-1499072:1:exon

position:1499046:1
position: 1499046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499072:1
position: 1499072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1499234-1499415:1:exon

position:1499234:1
position: 1499234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499415:1
position: 1499415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1514951-1515798:1:exon

position:1514951:1
position: 1514951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960041
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002876753.1
SIO_010081: LOC111960041
so part of: LOC111960041
location: join(1484356..1485044,1486696..1486725,1498637..1498708,1498901..1498939,1499046..1499072,1499234..1500243)
location: region:1484356-1500243:1
so has part: feature:1484356-1485044:1:exon
so has part: feature:1486696-1486725:1:exon
so has part: feature:1498637-1498708:1:exon
so has part: feature:1498901-1498939:1:exon
so has part: feature:1499046-1499072:1:exon
so has part: feature:1499234-1500243:1:exon

position:1500243:1
position: 1500243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1484356-1485044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486696-1486725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1498637-1498708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498901-1498939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499046-1499072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1499234-1500243:1:exon

LOC111960041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X2
translation: MGCFGSKPEDQIQIPAYSTKKGYNSTAEQENPLQTDAHLKLSPKKDASARSSKKTAKFDINQARSHEVDVTLDVDTAHPKLKIDGKSLQWTNESQQRNINIENCFNEEPFVLGKMGSPLKTYWEVNVKSYWEVNVKSYWEVKVKKDDWVLGVTKATAHRKGPLVFRPKGGFWVIRLSNGQRLKAMEDEEHVLEKGIPDKVGVYLDYQEKKVTFFNADDGSLIYSFIDGPSYQDDVLPLFSPWNNDAKPITILSITAT
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1486242..1486245,1486696..1486725,1486820..1486849,1498637..1498708,1498901..1498939,1499046..1499072,1499234..1499415,1514951..1515340)
location: region:1486242-1515340:1
so has part: feature:1486242-1486245:1:exon
so has part: feature:1486696-1486725:1:exon
so has part: feature:1486820-1486849:1:exon
so has part: feature:1498637-1498708:1:exon
so has part: feature:1498901-1498939:1:exon
so has part: feature:1499046-1499072:1:exon
so has part: feature:1499234-1499415:1:exon
so has part: feature:1514951-1515340:1:exon

XP_023837691.1
type: Protein
SIO_000068: ncbiprotein

position:1486242:1
position: 1486242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515340:1
position: 1515340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1486242-1486245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486696-1486725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1486820-1486849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498637-1498708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498901-1498939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1499046-1499072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1499234-1499415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1514951-1515340:1:exon

LOC111960041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023981922.1
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1486255..1486559,1486696..1486725,1486820..1486849,1498637..1498708,1498901..1498939,1499046..1499072,1499234..1499415,1514951..1515798)
location: region:1486255-1515798:1
so has part: feature:1486255-1486559:1:exon
so has part: feature:1486696-1486725:1:exon
so has part: feature:1486820-1486849:1:exon
so has part: feature:1498637-1498708:1:exon
so has part: feature:1498901-1498939:1:exon
so has part: feature:1499046-1499072:1:exon
so has part: feature:1499234-1499415:1:exon
so has part: feature:1514951-1515798:1:exon

position:1486255:1
position: 1486255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1486255-1486559:1:exon

position:1486559:1
position: 1486559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1486696-1486725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1486820-1486849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498637-1498708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498901-1498939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1499046-1499072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1499234-1499415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1514951-1515798:1:exon

LOC111960041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023981924.1
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1486255..1486559,1486696..1486725,1498637..1498708,1498901..1498939,1499046..1499072,1499234..1499415,1514951..1515798)
location: region:1486255-1515798:1
so has part: feature:1486255-1486559:1:exon
so has part: feature:1486696-1486725:1:exon
so has part: feature:1498637-1498708:1:exon
so has part: feature:1498901-1498939:1:exon
so has part: feature:1499046-1499072:1:exon
so has part: feature:1499234-1499415:1:exon
so has part: feature:1514951-1515798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1486255-1486559:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486696-1486725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1498637-1498708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498901-1498939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499046-1499072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1499234-1499415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1514951-1515798:1:exon

LOC111960041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X1
translation: MAIATITMGCFGSKPEDQIQIPAYSTKKGYNSTAEQENPLQTDAHLKLSPKKDASARSSKKTAKFDINQARSHEVDVTLDVDTAHPKLKIDGKSLQWTNESQQRNINIENCFNEEPFVLGKMGSPLKTYWEVNVKSYWEVNVKSYWEVKVKKDDWVLGVTKATAHRKGPLVFRPKGGFWVIRLSNGQRLKAMEDEEHVLEKGIPDKVGVYLDYQEKKVTFFNADDGSLIYSFIDGPSYQDDVLPLFSPWNNDAKPITILSITAT
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1486535..1486559,1486696..1486725,1486820..1486849,1498637..1498708,1498901..1498939,1499046..1499072,1499234..1499415,1514951..1515340)
location: region:1486535-1515340:1
so has part: feature:1486535-1486559:1:exon
so has part: feature:1486696-1486725:1:exon
so has part: feature:1486820-1486849:1:exon
so has part: feature:1498637-1498708:1:exon
so has part: feature:1498901-1498939:1:exon
so has part: feature:1499046-1499072:1:exon
so has part: feature:1499234-1499415:1:exon
so has part: feature:1514951-1515340:1:exon

XP_023837690.1
type: Protein
SIO_000068: ncbiprotein

position:1486535:1
position: 1486535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1486535-1486559:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486696-1486725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1486820-1486849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498637-1498708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498901-1498939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1499046-1499072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1499234-1499415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1514951-1515340:1:exon

LOC111960041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X3
translation: MAIATITMGCFGSKPEDQSYNSTAEQENPLQTDAHLKLSPKKDASARSSKKTAKFDINQARSHEVDVTLDVDTAHPKLKIDGKSLQWTNESQQRNINIENCFNEEPFVLGKMGSPLKTYWEVNVKSYWEVNVKSYWEVKVKKDDWVLGVTKATAHRKGPLVFRPKGGFWVIRLSNGQRLKAMEDEEHVLEKGIPDKVGVYLDYQEKKVTFFNADDGSLIYSFIDGPSYQDDVLPLFSPWNNDAKPITILSITAT
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1486535..1486559,1486696..1486725,1498637..1498708,1498901..1498939,1499046..1499072,1499234..1499415,1514951..1515340)
location: region:1486535-1515340:1
so has part: feature:1486535-1486559:1:exon
so has part: feature:1486696-1486725:1:exon
so has part: feature:1498637-1498708:1:exon
so has part: feature:1498901-1498939:1:exon
so has part: feature:1499046-1499072:1:exon
so has part: feature:1499234-1499415:1:exon
so has part: feature:1514951-1515340:1:exon

XP_023837692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1486535-1486559:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486696-1486725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1498637-1498708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498901-1498939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499046-1499072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1499234-1499415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1514951-1515340:1:exon

LOC111960041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023981927.1
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1498717..1498810,1498901..1498939,1499046..1499072,1499234..1499415,1514951..1515798)
location: region:1498717-1515798:1
so has part: feature:1498717-1498810:1:exon
so has part: feature:1498901-1498939:1:exon
so has part: feature:1499046-1499072:1:exon
so has part: feature:1499234-1499415:1:exon
so has part: feature:1514951-1515798:1:exon

position:1498717:1
position: 1498717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498717-1498810:1:exon

position:1498810:1
position: 1498810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1498901-1498939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499046-1499072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499234-1499415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1514951-1515798:1:exon

LOC111960041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X6
translation: MLYNFWVCTNFAPTYPSAPSYARLNASARSSKKTAKFDINQARSHEVDVTLDVDTAHPKLKIDGKSLQWTNESQQRNINIENCFNEEPFVLGKMGSPLKTYWEVNVKSYWEVNVKSYWEVKVKKDDWVLGVTKATAHRKGPLVFRPKGGFWVIRLSNGQRLKAMEDEEHVLEKGIPDKVGVYLDYQEKKVTFFNADDGSLIYSFIDGPSYQDDVLPLFSPWNNDAKPITILSITAT
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1498738..1498810,1498901..1498939,1499046..1499072,1499234..1499415,1514951..1515340)
location: region:1498738-1515340:1
so has part: feature:1498738-1498810:1:exon
so has part: feature:1498901-1498939:1:exon
so has part: feature:1499046-1499072:1:exon
so has part: feature:1499234-1499415:1:exon
so has part: feature:1514951-1515340:1:exon

XP_023837695.1
type: Protein
SIO_000068: ncbiprotein

position:1498738:1
position: 1498738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498738-1498810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1498901-1498939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499046-1499072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499234-1499415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1514951-1515340:1:exon

LOC111960041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023981926.1
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1512869..1513368,1513742..1513771,1513870..1513902,1514200..1514271,1514478..1514516,1514624..1514650,1514793..1515798)
location: region:1512869-1515798:1
so has part: feature:1512869-1513368:1:exon
so has part: feature:1513742-1513771:1:exon
so has part: feature:1513870-1513902:1:exon
so has part: feature:1514200-1514271:1:exon
so has part: feature:1514478-1514516:1:exon
so has part: feature:1514624-1514650:1:exon
so has part: feature:1514793-1515798:1:exon

position:1512869:1
position: 1512869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1512869-1513368:1:exon

position:1513368:1
position: 1513368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1513742-1513771:1:exon

position:1513742:1
position: 1513742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513771:1
position: 1513771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1513870-1513902:1:exon

position:1513870:1
position: 1513870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513902:1
position: 1513902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1514200-1514271:1:exon

position:1514200:1
position: 1514200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514271:1
position: 1514271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1514478-1514516:1:exon

position:1514478:1
position: 1514478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514516:1
position: 1514516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1514624-1514650:1:exon

position:1514624:1
position: 1514624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514650:1
position: 1514650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1514793-1515798:1:exon

position:1514793:1
position: 1514793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_023981930.1
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1512875..1513368,1513742..1513771,1513870..1513902,1514478..1514516,1514624..1514650,1514793..1515798)
location: region:1512875-1515798:1
so has part: feature:1512875-1513368:1:exon
so has part: feature:1513742-1513771:1:exon
so has part: feature:1513870-1513902:1:exon
so has part: feature:1514478-1514516:1:exon
so has part: feature:1514624-1514650:1:exon
so has part: feature:1514793-1515798:1:exon

position:1512875:1
position: 1512875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1512875-1513368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513742-1513771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513870-1513902:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1514478-1514516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1514624-1514650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1514793-1515798:1:exon

LOC111960041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023981925.1
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1513398..1513607,1513742..1513771,1513870..1513902,1514200..1514271,1514478..1514516,1514624..1514650,1514793..1515798)
location: region:1513398-1515798:1
so has part: feature:1513398-1513607:1:exon
so has part: feature:1513742-1513771:1:exon
so has part: feature:1513870-1513902:1:exon
so has part: feature:1514200-1514271:1:exon
so has part: feature:1514478-1514516:1:exon
so has part: feature:1514624-1514650:1:exon
so has part: feature:1514793-1515798:1:exon

position:1513398:1
position: 1513398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513398-1513607:1:exon

position:1513607:1
position: 1513607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1513742-1513771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513870-1513902:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1514200-1514271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1514478-1514516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1514624-1514650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1514793-1515798:1:exon

LOC111960041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960041
product: butyrophilin subfamily 1 member A1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023981929.1
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1513401..1513607,1513742..1513771,1513870..1513902,1514478..1514516,1514624..1514650,1514793..1515798)
location: region:1513401-1515798:1
so has part: feature:1513401-1513607:1:exon
so has part: feature:1513742-1513771:1:exon
so has part: feature:1513870-1513902:1:exon
so has part: feature:1514478-1514516:1:exon
so has part: feature:1514624-1514650:1:exon
so has part: feature:1514793-1515798:1:exon

position:1513401:1
position: 1513401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513401-1513607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513742-1513771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513870-1513902:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1514478-1514516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1514624-1514650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1514793-1515798:1:exon

LOC111960041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X4
translation: MGCFGSKPEDQMPIIRDSTKDKGYDSIARQENPLQTETQFKPPPKKDASASSRKNTAEFDINQALSHEVDVTLDVDTAHPKLKIDGKSLQWTNESQQRNINIENCFNEEPFVLGKMGSPLKSYWEVNVKSYWEVKVKKDDWVLGVTKATAHRKGPLVFRPKGGFWVIRLSNGQRLKAMEDEEHVLEKGIPDKVGVYLDYQEKKVTFFNADDGSLIYSFIDGPSYQDDVLPLFSPWNNDAKPITILSITAT
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1513604..1513607,1513742..1513771,1513870..1513902,1514200..1514271,1514478..1514516,1514624..1514650,1514793..1515340)
location: region:1513604-1515340:1
so has part: feature:1513604-1513607:1:exon
so has part: feature:1513742-1513771:1:exon
so has part: feature:1513870-1513902:1:exon
so has part: feature:1514200-1514271:1:exon
so has part: feature:1514478-1514516:1:exon
so has part: feature:1514624-1514650:1:exon
so has part: feature:1514793-1515340:1:exon

XP_023837693.1
type: Protein
SIO_000068: ncbiprotein

position:1513604:1
position: 1513604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513604-1513607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513742-1513771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513870-1513902:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1514200-1514271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1514478-1514516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1514624-1514650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1514793-1515340:1:exon

LOC111960041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X8
translation: MGCFGSKPEDQMPIIRDSTKDKDASASSRKNTAEFDINQALSHEVDVTLDVDTAHPKLKIDGKSLQWTNESQQRNINIENCFNEEPFVLGKMGSPLKSYWEVNVKSYWEVKVKKDDWVLGVTKATAHRKGPLVFRPKGGFWVIRLSNGQRLKAMEDEEHVLEKGIPDKVGVYLDYQEKKVTFFNADDGSLIYSFIDGPSYQDDVLPLFSPWNNDAKPITILSITAT
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1513604..1513607,1513742..1513771,1513870..1513902,1514478..1514516,1514624..1514650,1514793..1515340)
location: region:1513604-1515340:1
so has part: feature:1513604-1513607:1:exon
so has part: feature:1513742-1513771:1:exon
so has part: feature:1513870-1513902:1:exon
so has part: feature:1514478-1514516:1:exon
so has part: feature:1514624-1514650:1:exon
so has part: feature:1514793-1515340:1:exon

XP_023837697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1513604-1513607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513742-1513771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513870-1513902:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1514478-1514516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1514624-1514650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1514793-1515340:1:exon

LOC111960041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X5
translation: MPIIRDSTKDKGYDSIARQENPLQTETQFKPPPKKDASASSRKNTAEFDINQALSHEVDVTLDVDTAHPKLKIDGKSLQWTNESQQRNINIENCFNEEPFVLGKMGSPLKSYWEVNVKSYWEVKVKKDDWVLGVTKATAHRKGPLVFRPKGGFWVIRLSNGQRLKAMEDEEHVLEKGIPDKVGVYLDYQEKKVTFFNADDGSLIYSFIDGPSYQDDVLPLFSPWNNDAKPITILSITAT
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1513771,1513870..1513902,1514200..1514271,1514478..1514516,1514624..1514650,1514793..1515340)
location: region:1513771-1515340:1
so has part: feature:1513771-1513771:1:exon
so has part: feature:1513870-1513902:1:exon
so has part: feature:1514200-1514271:1:exon
so has part: feature:1514478-1514516:1:exon
so has part: feature:1514624-1514650:1:exon
so has part: feature:1514793-1515340:1:exon

XP_023837694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1513771-1513771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513870-1513902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1514200-1514271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1514478-1514516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1514624-1514650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1514793-1515340:1:exon

LOC111960041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X9
translation: MPIIRDSTKDKDASASSRKNTAEFDINQALSHEVDVTLDVDTAHPKLKIDGKSLQWTNESQQRNINIENCFNEEPFVLGKMGSPLKSYWEVNVKSYWEVKVKKDDWVLGVTKATAHRKGPLVFRPKGGFWVIRLSNGQRLKAMEDEEHVLEKGIPDKVGVYLDYQEKKVTFFNADDGSLIYSFIDGPSYQDDVLPLFSPWNNDAKPITILSITAT
SIO_010081: LOC111960041
subclass of: SO_0000673
so part of: LOC111960041
location: join(1513771,1513870..1513902,1514478..1514516,1514624..1514650,1514793..1515340)
location: region:1513771-1515340:1
so has part: feature:1513771-1513771:1:exon
so has part: feature:1513870-1513902:1:exon
so has part: feature:1514478-1514516:1:exon
so has part: feature:1514624-1514650:1:exon
so has part: feature:1514793-1515340:1:exon

XP_023837698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1513771-1513771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513870-1513902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1514478-1514516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1514624-1514650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1514793-1515340:1:exon

LOC111960028
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1529209..1542010)
location: region:1529209-1542010:-1
so has part: feature:1529209-1542010:-1:exon
subclass of: SO_0000010

111960028
type: Gene
SIO_000068: ncbigene

position:1529209:-1
position: 1529209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542010:-1
position: 1542010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529209-1542010:-1:exon

LOC111960028
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960028
product: butyrophilin subfamily 1 member A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023981896.1
SIO_010081: LOC111960028
subclass of: SO_0000673
so part of: LOC111960028
location: complement(join(1529209..1530680,1531348..1531374,1531490..1531525,1531666..1531692,1531811..1531930,1532901..1533191,1534262..1534600,1541449..1541528,1541905..1542010))
location: region:1529209-1542010:-1
so has part: feature:1541905-1542010:-1:exon
so has part: feature:1541449-1541528:-1:exon
so has part: feature:1534262-1534600:-1:exon
so has part: feature:1532901-1533191:-1:exon
so has part: feature:1531811-1531930:-1:exon
so has part: feature:1531666-1531692:-1:exon
so has part: feature:1531490-1531525:-1:exon
so has part: feature:1531348-1531374:-1:exon
so has part: feature:1529209-1530680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1541905-1542010:-1:exon

position:1541905:-1
position: 1541905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1541449-1541528:-1:exon

position:1541449:-1
position: 1541449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541528:-1
position: 1541528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1534262-1534600:-1:exon

position:1534262:-1
position: 1534262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1534600:-1
position: 1534600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1532901-1533191:-1:exon

position:1532901:-1
position: 1532901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533191:-1
position: 1533191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1531811-1531930:-1:exon

position:1531811:-1
position: 1531811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531930:-1
position: 1531930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1531666-1531692:-1:exon

position:1531666:-1
position: 1531666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531692:-1
position: 1531692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1531490-1531525:-1:exon

position:1531490:-1
position: 1531490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531525:-1
position: 1531525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1531348-1531374:-1:exon

position:1531348:-1
position: 1531348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531374:-1
position: 1531374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1529209-1530680:-1:exon

position:1530680:-1
position: 1530680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960028
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960028
product: butyrophilin subfamily 1 member A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023981895.1
SIO_010081: LOC111960028
subclass of: SO_0000673
so part of: LOC111960028
location: complement(join(1529209..1530680,1531072..1531101,1531222..1531248,1531348..1531374,1531490..1531525,1531666..1531692,1531811..1531930,1532901..1533191,1534262..1534600,1541449..1541528,1541905..1542010))
location: region:1529209-1542010:-1
so has part: feature:1541905-1542010:-1:exon
so has part: feature:1541449-1541528:-1:exon
so has part: feature:1534262-1534600:-1:exon
so has part: feature:1532901-1533191:-1:exon
so has part: feature:1531811-1531930:-1:exon
so has part: feature:1531666-1531692:-1:exon
so has part: feature:1531490-1531525:-1:exon
so has part: feature:1531348-1531374:-1:exon
so has part: feature:1531222-1531248:-1:exon
so has part: feature:1531072-1531101:-1:exon
so has part: feature:1529209-1530680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1541905-1542010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1541449-1541528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1534262-1534600:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1532901-1533191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1531811-1531930:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1531666-1531692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1531490-1531525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1531348-1531374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1531222-1531248:-1:exon

position:1531222:-1
position: 1531222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531248:-1
position: 1531248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1531072-1531101:-1:exon

position:1531072:-1
position: 1531072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531101:-1
position: 1531101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1529209-1530680:-1:exon

LOC111960028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X2
translation: MKVFSYLQLTLRYTFLVPAVRCVMEPLIHKVCLLTFLVVFDATSSVADLSLIVPPDPVVASAGDDIILPCHLSPQSSAVAMDIRWFKEGEFTNPLYLYKSRTGEEGKGYKGRVSLFTQELERGNISLLLKNVKVSDMGRYKCQASHLDWIQEPAVVLQVTKQGSVPRISMMKHHRVFIQLSCSSENWFPEPHMLWTDSSGKEITSAETERPKQKEGGVLYSITSHMRVGMDQLEGVTCVVMSKDRGTKMESTSLQMTEEFYLSSLPDRVYISAFVIPVFLALVCITASVLFVMHQKRDIQEKLKPINEVKAELKKKNNELTKKDQLFVHVTLDPDTANPKLTLSNDNKSVKFGDLRRERDTGKRFEEKQCVLGMEGYDTGKHYWEVDLGEKTQWSVGVAQDREKRGSNIQMIPENGYWSIRLENGVLKTVEKPLNVLPIELKPVKLGVLVDYEEGKIVFFNVEKRCHIHSFTGTFTKKLYPFFGPLIDCEEELKISPVPQAEK
SIO_010081: LOC111960028
subclass of: SO_0000673
so part of: LOC111960028
location: complement(join(1530151..1530680,1531348..1531374,1531490..1531525,1531666..1531692,1531811..1531930,1532901..1533191,1534262..1534600,1541449..1541528,1541905..1541966))
location: region:1530151-1541966:-1
so has part: feature:1541905-1541966:-1:exon
so has part: feature:1541449-1541528:-1:exon
so has part: feature:1534262-1534600:-1:exon
so has part: feature:1532901-1533191:-1:exon
so has part: feature:1531811-1531930:-1:exon
so has part: feature:1531666-1531692:-1:exon
so has part: feature:1531490-1531525:-1:exon
so has part: feature:1531348-1531374:-1:exon
so has part: feature:1530151-1530680:-1:exon

XP_023837664.1
type: Protein
SIO_000068: ncbiprotein

position:1530151:-1
position: 1530151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541966:-1
position: 1541966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1541905-1541966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1541449-1541528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1534262-1534600:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1532901-1533191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1531811-1531930:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1531666-1531692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1531490-1531525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1531348-1531374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1530151-1530680:-1:exon

LOC111960028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X1
translation: MKVFSYLQLTLRYTFLVPAVRCVMEPLIHKVCLLTFLVVFDATSSVADLSLIVPPDPVVASAGDDIILPCHLSPQSSAVAMDIRWFKEGEFTNPLYLYKSRTGEEGKGYKGRVSLFTQELERGNISLLLKNVKVSDMGRYKCQASHLDWIQEPAVVLQVTKQGSVPRISMMKHHRVFIQLSCSSENWFPEPHMLWTDSSGKEITSAETERPKQKEGGVLYSITSHMRVGMDQLEGVTCVVMSKDRGTKMESTSLQMTEEFYLSSLPDRVYISAFVIPVFLALVCITASVLFVMHQKRDIQEKLKPINEVKAELKKKNNELTKKDQLFGIAGTIPDTVWTLMVSHHAVHVTLDPDTANPKLTLSNDNKSVKFGDLRRERDTGKRFEEKQCVLGMEGYDTGKHYWEVDLGEKTQWSVGVAQDREKRGSNIQMIPENGYWSIRLENGVLKTVEKPLNVLPIELKPVKLGVLVDYEEGKIVFFNVEKRCHIHSFTGTFTKKLYPFFGPLIDCEEELKISPVPQAEK
SIO_010081: LOC111960028
subclass of: SO_0000673
so part of: LOC111960028
location: complement(join(1530151..1530680,1531072..1531101,1531222..1531248,1531348..1531374,1531490..1531525,1531666..1531692,1531811..1531930,1532901..1533191,1534262..1534600,1541449..1541528,1541905..1541966))
location: region:1530151-1541966:-1
so has part: feature:1541905-1541966:-1:exon
so has part: feature:1541449-1541528:-1:exon
so has part: feature:1534262-1534600:-1:exon
so has part: feature:1532901-1533191:-1:exon
so has part: feature:1531811-1531930:-1:exon
so has part: feature:1531666-1531692:-1:exon
so has part: feature:1531490-1531525:-1:exon
so has part: feature:1531348-1531374:-1:exon
so has part: feature:1531222-1531248:-1:exon
so has part: feature:1531072-1531101:-1:exon
so has part: feature:1530151-1530680:-1:exon

XP_023837663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1541905-1541966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1541449-1541528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1534262-1534600:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1532901-1533191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1531811-1531930:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1531666-1531692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1531490-1531525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1531348-1531374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1531222-1531248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1531072-1531101:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1530151-1530680:-1:exon

LOC111960029
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1564057..1579643)
location: region:1564057-1579643:-1
so has part: feature:1564057-1579643:-1:exon
subclass of: SO_0000010

111960029
type: Gene
SIO_000068: ncbigene

position:1564057:-1
position: 1564057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579643:-1
position: 1579643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1564057-1579643:-1:exon

LOC111960029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960029
product: butyrophilin subfamily 2 member A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023981897.1
SIO_010081: LOC111960029
subclass of: SO_0000673
so part of: LOC111960029
location: complement(join(1564057..1564823,1565085..1565114,1565235..1565261,1565361..1565387,1565503..1565538,1565679..1565705,1565926..1566045,1570700..1570990,1574510..1574848,1578824..1578903,1579234..1579643))
location: region:1564057-1579643:-1
so has part: feature:1579234-1579643:-1:exon
so has part: feature:1578824-1578903:-1:exon
so has part: feature:1574510-1574848:-1:exon
so has part: feature:1570700-1570990:-1:exon
so has part: feature:1565926-1566045:-1:exon
so has part: feature:1565679-1565705:-1:exon
so has part: feature:1565503-1565538:-1:exon
so has part: feature:1565361-1565387:-1:exon
so has part: feature:1565235-1565261:-1:exon
so has part: feature:1565085-1565114:-1:exon
so has part: feature:1564057-1564823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1579234-1579643:-1:exon

position:1579234:-1
position: 1579234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1578824-1578903:-1:exon

position:1578824:-1
position: 1578824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578903:-1
position: 1578903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1574510-1574848:-1:exon

position:1574510:-1
position: 1574510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574848:-1
position: 1574848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1570700-1570990:-1:exon

position:1570700:-1
position: 1570700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570990:-1
position: 1570990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1565926-1566045:-1:exon

position:1565926:-1
position: 1565926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566045:-1
position: 1566045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1565679-1565705:-1:exon

position:1565679:-1
position: 1565679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565705:-1
position: 1565705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1565503-1565538:-1:exon

position:1565503:-1
position: 1565503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565538:-1
position: 1565538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1565361-1565387:-1:exon

position:1565361:-1
position: 1565361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565387:-1
position: 1565387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1565235-1565261:-1:exon

position:1565235:-1
position: 1565235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565261:-1
position: 1565261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1565085-1565114:-1:exon

position:1565085:-1
position: 1565085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565114:-1
position: 1565114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1564057-1564823:-1:exon

position:1564823:-1
position: 1564823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111960029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 2 member A2-like
translation: MKVFSYLQLTLRYTFLVPAVRCIMEPLIHKICSLTFLVIFTASSSGADFTLSVPPDPVVAFDGHDIILPCHLSPQTSAVAMDIRWFRDGHFAEPLYLYEDRIREEGRGYEGRVSLFSQELERGNISLLLKNVKVSDKGRYKCQASHLNWIQEAEIVLQVTQQGSFPRICIRKHHRVFIQLSCSSENWYPEPHMLWTDRSGKEISSTETERPKQKEGGDLYSITSHMRIGMDQLEGITCVVMSQDRETILESPLLQMTEEFYLSSLPDRVYISAFVIPVFLALVCITASVLFVMHQKRDIQEKLKPINEVKAELKEKNNELTKKDRLLGIAGTIPDTVWTLMVSHHAVDVTLDPDTANLKLIVSDDNKSVKFGDLRRGRGTEKRFEEKHCVLGMEGYDTGKHYWEVDLGEKSQWSVGVAQDPENRGSNIQMIPENGYWSIRLDNGVLKTVEKPLNVLPIDLKPLKLGVLVDYEEGKIVFLNVEKRCHIHSFIGTFTKKLYPFFGPLIDCKEELKISPVPQAEK
SIO_010081: LOC111960029
subclass of: SO_0000673
so part of: LOC111960029
location: complement(join(1564294..1564823,1565085..1565114,1565235..1565261,1565361..1565387,1565503..1565538,1565679..1565705,1565926..1566045,1570700..1570990,1574510..1574848,1578824..1578903,1579234..1579295))
location: region:1564294-1579295:-1
so has part: feature:1579234-1579295:-1:exon
so has part: feature:1578824-1578903:-1:exon
so has part: feature:1574510-1574848:-1:exon
so has part: feature:1570700-1570990:-1:exon
so has part: feature:1565926-1566045:-1:exon
so has part: feature:1565679-1565705:-1:exon
so has part: feature:1565503-1565538:-1:exon
so has part: feature:1565361-1565387:-1:exon
so has part: feature:1565235-1565261:-1:exon
so has part: feature:1565085-1565114:-1:exon
so has part: feature:1564294-1564823:-1:exon

XP_023837665.1
type: Protein
SIO_000068: ncbiprotein

position:1564294:-1
position: 1564294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579295:-1
position: 1579295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1579234-1579295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1578824-1578903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1574510-1574848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1570700-1570990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1565926-1566045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565679-1565705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1565503-1565538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1565361-1565387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1565235-1565261:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1565085-1565114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1564294-1564823:-1:exon

LOC111960039
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111960039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1588763..1607206
location: region:1588763-1607206:1
so has part: feature:1588763-1607206:1:exon
subclass of: SO_0000010

111960039
type: Gene
SIO_000068: ncbigene

position:1588763:1
position: 1588763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607206:1
position: 1607206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588763-1607206:1:exon

LOC111960039
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960039
product: butyrophilin subfamily 1 member A1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_023981919.1
SIO_010081: LOC111960039
subclass of: SO_0000673
so part of: LOC111960039
location: join(1588763..1588817,1593040..1593101,1593674..1593709,1594014..1594058,1594200..1594232,1594341..1594358,1606098..1607206)
location: region:1588763-1607206:1
so has part: feature:1588763-1588817:1:exon
so has part: feature:1593040-1593101:1:exon
so has part: feature:1593674-1593709:1:exon
so has part: feature:1594014-1594058:1:exon
so has part: feature:1594200-1594232:1:exon
so has part: feature:1594341-1594358:1:exon
so has part: feature:1606098-1607206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1588763-1588817:1:exon

position:1588817:1
position: 1588817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1593040-1593101:1:exon

position:1593040:1
position: 1593040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593101:1
position: 1593101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1593674-1593709:1:exon

position:1593674:1
position: 1593674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593709:1
position: 1593709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1594014-1594058:1:exon

position:1594014:1
position: 1594014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594058:1
position: 1594058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1594200-1594232:1:exon

position:1594200:1
position: 1594200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594232:1
position: 1594232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1594341-1594358:1:exon

position:1594341:1
position: 1594341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594358:1
position: 1594358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1606098-1607206:1:exon

position:1606098:1
position: 1606098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960039
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960039
product: butyrophilin subfamily 1 member A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_023981917.1
SIO_010081: LOC111960039
subclass of: SO_0000673
so part of: LOC111960039
location: join(1588763..1588817,1593040..1593101,1593674..1593709,1594014..1594058,1594200..1594232,1594341..1594358,1596447..1597494)
location: region:1588763-1597494:1
so has part: feature:1588763-1588817:1:exon
so has part: feature:1593040-1593101:1:exon
so has part: feature:1593674-1593709:1:exon
so has part: feature:1594014-1594058:1:exon
so has part: feature:1594200-1594232:1:exon
so has part: feature:1594341-1594358:1:exon
so has part: feature:1596447-1597494:1:exon

position:1597494:1
position: 1597494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588763-1588817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1593040-1593101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1593674-1593709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594014-1594058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594200-1594232:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594341-1594358:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596447-1597494:1:exon

position:1596447:1
position: 1596447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111960039
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960039
product: butyrophilin subfamily 1 member A1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_023981920.1
SIO_010081: LOC111960039
subclass of: SO_0000673
so part of: LOC111960039
location: join(1588763..1588817,1593040..1593101,1593674..1593709,1594025..1594058,1594200..1594232,1594341..1594358,1596447..1597494)
location: region:1588763-1597494:1
so has part: feature:1588763-1588817:1:exon
so has part: feature:1593040-1593101:1:exon
so has part: feature:1593674-1593709:1:exon
so has part: feature:1594025-1594058:1:exon
so has part: feature:1594200-1594232:1:exon
so has part: feature:1594341-1594358:1:exon
so has part: feature:1596447-1597494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1588763-1588817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1593040-1593101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1593674-1593709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594025-1594058:1:exon

position:1594025:1
position: 1594025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1594200-1594232:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594341-1594358:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596447-1597494:1:exon

LOC111960039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X3
translation: MGGCCSRPVENDTVIEQPKTSTTSPPMQDASVQTMEQSTDEKLHEVDVTLDVDTAHPNLLIDGKSVRWIKETPQRPCSDKMFDEDPYVLGIMGRAWRAYWEVNVEKKDDWVLGVTKATANRKGQLVLSPVNGFWVIRLSNGERLKAMDDKEHVLDKNIPDKVGIYLDYKEKKVTFFNAEDGSHLYSFINGPSYEDEVRPLFSPWNNDTDPITILFIESKKSK
SIO_010081: LOC111960039
subclass of: SO_0000673
so part of: LOC111960039
location: join(1593098..1593101,1593674..1593709,1594014..1594058,1594200..1594232,1594341..1594358,1606098..1606630)
location: region:1593098-1606630:1
so has part: feature:1593098-1593101:1:exon
so has part: feature:1593674-1593709:1:exon
so has part: feature:1594014-1594058:1:exon
so has part: feature:1594200-1594232:1:exon
so has part: feature:1594341-1594358:1:exon
so has part: feature:1606098-1606630:1:exon

XP_023837687.1
type: Protein
SIO_000068: ncbiprotein

position:1593098:1
position: 1593098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606630:1
position: 1606630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593098-1593101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1593674-1593709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594014-1594058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594200-1594232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594341-1594358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1606098-1606630:1:exon

LOC111960039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X2
translation: MGGCCSRPVENDTVIEQPKTSTTSPPMQDASVQTMEQSTDEKLHEVDVTLDVDTAHPNILIDGKTVRWIKETPQRLCSDKMFDEDPYVLGIMGRAWRAYWEVNVEKKDDWVLGVTKATANRKGQLVLSPANGFWVIRLANGERLKAMDDKEHVLDKDIPDEVAIYLDYKENKVTFFNTEDGSHIYSFINGPSYEDEVRPLFSPWNNDTDPITILSIETKQSKHLKH
SIO_010081: LOC111960039
subclass of: SO_0000673
so part of: LOC111960039
location: join(1593098..1593101,1593674..1593709,1594014..1594058,1594200..1594232,1594341..1594358,1596447..1596991)
location: region:1593098-1596991:1
so has part: feature:1593098-1593101:1:exon
so has part: feature:1593674-1593709:1:exon
so has part: feature:1594014-1594058:1:exon
so has part: feature:1594200-1594232:1:exon
so has part: feature:1594341-1594358:1:exon
so has part: feature:1596447-1596991:1:exon

XP_023837685.1
type: Protein
SIO_000068: ncbiprotein

position:1596991:1
position: 1596991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593098-1593101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1593674-1593709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594014-1594058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594200-1594232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594341-1594358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596447-1596991:1:exon

LOC111960039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111960039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1 isoform X4
translation: MQDASVQTMEQSTDEKLHEVDVTLDVDTAHPNILIDGKTVRWIKETPQRLCSDKMFDEDPYVLGIMGRAWRAYWEVNVEKKDDWVLGVTKATANRKGQLVLSPANGFWVIRLANGERLKAMDDKEHVLDKDIPDEVAIYLDYKENKVTFFNTEDGSHIYSFINGPSYEDEVRPLFSPWNNDTDPITILSIETKQSKHLKH
SIO_010081: LOC111960039
subclass of: SO_0000673
so part of: LOC111960039
location: join(1594052..1594058,1594200..1594232,1594341..1594358,1596447..1596991)
location: region:1594052-1596991:1
so has part: feature:1594052-1594058:1:exon
so has part: feature:1594200-1594232:1:exon
so has part: feature:1594341-1594358:1:exon
so has part: feature:1596447-1596991:1:exon

XP_023837688.1
type: Protein
SIO_000068: ncbiprotein

position:1594052:1
position: 1594052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594052-1594058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594200-1594232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594341-1594358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1596447-1596991:1:exon

LOC111960039
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111960039
product: butyrophilin subfamily 1 member A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_023981916.1
SIO_010081: LOC111960039
subclass of: SO_0000673
so part of: LOC111960039
location: join(1602397..1602597,1604179..1604305,1604457..1604533,1604779..1604934,1605529..1605564,1605857..1605883,1606098..1607206)
location: region:1602397-1607206:1
so has part: feature:1602397-1602597:1:exon
so has part: feature:1604179-1604305:1:exon
so has part: feature:1604457-1604533:1:exon
so has part: feature:1604779-1604934:1:exon
so has part: feature:1605529-1605564:1:exon
so has part: feature:1605857-1605883:1:exon
so has part: feature:1606098-1607206:1:exon

position:1602397:1
position: 1602397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1602397-1602597:1:exon