Salvelinus alpinus isolate IW2-2015 linkage group LG35, ASM291031v2, whole genome shotgun sequence.
type: Entry
definition: Salvelinus alpinus isolate IW2-2015 linkage group LG35, ASM291031v2, whole genome shotgun sequence.
sequence version: NC_036874.1
sequence date: 2018-02-25
sequence: sequence
division: CON
label: NC_036874.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA433373
dblink: SAMN06561764
keyword: WGS
keyword: RefSeq
source: Salvelinus alpinus (Arctic char)
organism: Salvelinus alpinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM009426.1.\nAssembly name: ASM291031v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Victoria on\n2018/02/02. The original whole-genome shotgun project has the\naccession PPUY00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Victoria\nAssembly Date :: OCT-2017\nAssembly Method :: AllPaths v. 52488; PBSuite v. 15.8.24;\n SSpace-LongRead v. 1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 146.0x\nSequencing Technology :: Illumina Paired-End; Illumina Mate-Pair;\n PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Salvelinus alpinus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 21595701
topology: linear
so has quality: SO_0000987
location: 1..21595701
location: region:1-21595701:1
RO_0002162: 8036

NC_036874
type: RefSeq
SIO_000068: refseq

PRJNA433373
type: BioProject
SIO_000068: bioproject

SAMN06561764
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21595701:1
position: 21595701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21595701:1:source
so part of: sequence
organism: Salvelinus alpinus
mol type: genomic DNA
isolate: IW2-2015
tissue type: liver
dev stage: juvenile
collected by: Jon Lucas
linkage group: LG35

8036
type: Taxonomy
SIO_000068: taxonomy

LOC111958583
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 36939..39397
location: region:36939-39397:1
so has part: feature:36939-39397:1:exon

111958583
type: Gene
SIO_000068: ncbigene

position:36939:1
position: 36939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39397:1
position: 39397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36939-39397:1:exon

LOC111958583
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958583
subclass of: SO_0000673
so part of: LOC111958583
location: 36939..36977
location: region:36939-36977:1
so has part: feature:36939-36977:1:exon

position:36977:1
position: 36977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36939-36977:1:exon

LOC111958583
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958583
subclass of: SO_0000673
so part of: LOC111958583
location: 37632..37808
location: region:37632-37808:1
so has part: feature:37632-37808:1:exon

position:37632:1
position: 37632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37808:1
position: 37808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37632-37808:1:exon

LOC111958583
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958583
subclass of: SO_0000673
so part of: LOC111958583
location: 38095..38519
location: region:38095-38519:1
so has part: feature:38095-38519:1:exon

position:38095:1
position: 38095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38519:1
position: 38519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38095-38519:1:exon

LOC111958583
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958583
subclass of: SO_0000673
so part of: LOC111958583
location: 38657..38862
location: region:38657-38862:1
so has part: feature:38657-38862:1:exon

position:38657:1
position: 38657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38862:1
position: 38862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38657-38862:1:exon

LOC111958583
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958583
subclass of: SO_0000673
so part of: LOC111958583
location: 39007..39122
location: region:39007-39122:1
so has part: feature:39007-39122:1:exon

position:39007:1
position: 39007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39122:1
position: 39122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39007-39122:1:exon

LOC111958583
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958583
subclass of: SO_0000673
so part of: LOC111958583
location: 39332..39397
location: region:39332-39397:1
so has part: feature:39332-39397:1:exon

position:39332:1
position: 39332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39332-39397:1:exon

LOC111958571
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 41436..41918
location: region:41436-41918:1
so has part: feature:41436-41918:1:exon
subclass of: SO_0000011

111958571
type: Gene
SIO_000068: ncbigene

position:41436:1
position: 41436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41918:1
position: 41918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41436-41918:1:exon

LOC111958571
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111958571
product: uncharacterized LOC111958571
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_002876558.2
SIO_010081: LOC111958571
subclass of: SO_0000673
so part of: LOC111958571
location: join(41436..41510,41811..41918)
location: region:41436-41918:1
so has part: feature:41436-41510:1:exon
so has part: feature:41811-41918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41436-41510:1:exon

position:41510:1
position: 41510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41811-41918:1:exon

position:41811:1
position: 41811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959046
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43005..44366
location: region:43005-44366:1
so has part: feature:43005-44366:1:exon
subclass of: SO_0000010

111959046
type: Gene
SIO_000068: ncbigene

position:43005:1
position: 43005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44366:1
position: 44366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43005-44366:1:exon

LOC111959046
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959046
product: protein S100-A11-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023980460.2
SIO_010081: LOC111959046
subclass of: SO_0000673
so part of: LOC111959046
location: join(43005..43105,43409..43538,44098..44366)
location: region:43005-44366:1
so has part: feature:43005-43105:1:exon
so has part: feature:43409-43538:1:exon
so has part: feature:44098-44366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43005-43105:1:exon

position:43105:1
position: 43105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43409-43538:1:exon

position:43409:1
position: 43409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43538:1
position: 43538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44098-44366:1:exon

position:44098:1
position: 44098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959046
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein S100-A11-like
translation: MESAIDVLVSQFKAFAGXDGSSDTLSRDEFQSLVKTQLPNFVKNAGDPAVIDRLMDSIDENNDGELTFLEFWQLIGRLANQRGGFIQ
SIO_010081: LOC111959046
subclass of: SO_0000673
so part of: LOC111959046
location: join(43411..43538,44098..44232)
location: region:43411-44232:1
so has part: feature:43411-43538:1:exon
so has part: feature:44098-44232:1:exon

XP_023836228.1
type: Protein
SIO_000068: ncbiprotein

position:43411:1
position: 43411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44232:1
position: 44232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43411-43538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44098-44232:1:exon

LOC111958586
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(47806..64614)
location: region:47806-64614:-1
so has part: feature:47806-64614:-1:exon

111958586
type: Gene
SIO_000068: ncbigene

position:47806:-1
position: 47806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64614:-1
position: 64614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47806-64614:-1:exon

LOC111958586
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958586
subclass of: SO_0000673
so part of: LOC111958586
location: complement(47806..48285)
location: region:47806-48285:-1
so has part: feature:47806-48285:-1:exon

position:48285:-1
position: 48285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47806-48285:-1:exon

LOC111958586
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958586
subclass of: SO_0000673
so part of: LOC111958586
location: complement(48685..48996)
location: region:48685-48996:-1
so has part: feature:48685-48996:-1:exon

position:48685:-1
position: 48685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48996:-1
position: 48996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48685-48996:-1:exon

LOC111958586
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958586
subclass of: SO_0000673
so part of: LOC111958586
location: complement(49078..49271)
location: region:49078-49271:-1
so has part: feature:49078-49271:-1:exon

position:49078:-1
position: 49078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49271:-1
position: 49271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49078-49271:-1:exon

LOC111958586
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958586
subclass of: SO_0000673
so part of: LOC111958586
location: complement(49424..49638)
location: region:49424-49638:-1
so has part: feature:49424-49638:-1:exon

position:49424:-1
position: 49424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49638:-1
position: 49638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49424-49638:-1:exon

LOC111958586
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958586
subclass of: SO_0000673
so part of: LOC111958586
location: complement(51530..52188)
location: region:51530-52188:-1
so has part: feature:51530-52188:-1:exon

position:51530:-1
position: 51530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52188:-1
position: 52188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51530-52188:-1:exon

LOC111958586
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958586
subclass of: SO_0000673
so part of: LOC111958586
location: complement(52287..52422)
location: region:52287-52422:-1
so has part: feature:52287-52422:-1:exon

position:52287:-1
position: 52287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52422:-1
position: 52422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52287-52422:-1:exon

LOC111958586
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958586
subclass of: SO_0000673
so part of: LOC111958586
location: complement(61219..61399)
location: region:61219-61399:-1
so has part: feature:61219-61399:-1:exon

position:61219:-1
position: 61219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61399:-1
position: 61399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61219-61399:-1:exon

LOC112067966
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(64487..68167)
location: region:64487-68167:-1
so has part: feature:64487-68167:-1:exon
subclass of: SO_0000010

112067966
type: Gene
SIO_000068: ncbigene

position:64487:-1
position: 64487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68167:-1
position: 68167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64487-68167:-1:exon

LOC112067966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC112067966
product: pre-B-cell leukemia transcription factor-interacting protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_024134915.1
SIO_010081: LOC112067966
subclass of: SO_0000673
so part of: LOC112067966
location: complement(join(64487..66196,66579..66813,66947..67051,67159..67211,67732..67755,68012..68167))
location: region:64487-68167:-1
so has part: feature:68012-68167:-1:exon
so has part: feature:67732-67755:-1:exon
so has part: feature:67159-67211:-1:exon
so has part: feature:66947-67051:-1:exon
so has part: feature:66579-66813:-1:exon
so has part: feature:64487-66196:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68012-68167:-1:exon

position:68012:-1
position: 68012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67732-67755:-1:exon

position:67732:-1
position: 67732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67755:-1
position: 67755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:67159-67211:-1:exon

position:67159:-1
position: 67159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67211:-1
position: 67211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:66947-67051:-1:exon

position:66947:-1
position: 66947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67051:-1
position: 67051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:66579-66813:-1:exon

position:66579:-1
position: 66579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66813:-1
position: 66813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64487-66196:-1:exon

position:66196:-1
position: 66196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958586
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958586
subclass of: SO_0000673
so part of: LOC111958586
location: complement(64579..64614)
location: region:64579-64614:-1
so has part: feature:64579-64614:-1:exon

position:64579:-1
position: 64579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64579-64614:-1:exon

LOC112067966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC112067966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor-interacting protein 1-like
translation: MDLDGEGDYDARELRETEVVGKQEWLNPEVPLPLDSTDQLNKLAKEDPRIAVLQAQLMAQKEELKVAQKEAEDGGKERKKREEVEKEHGRLKKEMTSLPVLQKENERMKRELESVPVLQKDLETLRATVTELKHSTAKEAASPPVSASVPPPSGQAGDDSQNAAGTIEREGKKPGKGEKTDQKELKEEKTDWNKGGKTDWNKGGKTDWNKGGKKDCEVEKEWRSGKYDQEKEGKEEKEWKKKEDKKGEWKKDXSSXGDEGKPWKDRGNKMEWKEKSEKKDWKVEKDXKKEKPERWSDSKEWKKGKGDRKGKEEKNQKKGGWVEWKGEKNGKEDTNRRKGGWNEGRDEWKGEKNGNEDKNRRKGGWNEGRDAWKGEEKNRRKGGYNKGRDEWKGEKEWKNDKDDYKDLGKGWKERGEKKEWKGEKDWTKKDVSKEWKSKDNRRENEWSDGNRKMEGLKERNGGNWEKDRGNDKYEKDHHHYSKEGQKEKERRKREKGPPQTHRRPPLEQPDYWSHQRERLQHKPNPQTHCSSVEACAQAEGLLPVTMPEFEALLLGYLVKAERVGVEASKREELSKLTKEFFSDGVFVHDQMSFKDFVEDVDDILEDMVEDEEVEEEMDDFEEEAMNRFSVPGGGEREKWRKESGRGXV
SIO_010081: LOC112067966
subclass of: SO_0000673
so part of: LOC112067966
location: complement(join(64659..66196,66579..66813,66947..67051,67159..67211,67732..67747))
location: region:64659-67747:-1
so has part: feature:67732-67747:-1:exon
so has part: feature:67159-67211:-1:exon
so has part: feature:66947-67051:-1:exon
so has part: feature:66579-66813:-1:exon
so has part: feature:64659-66196:-1:exon

XP_023990683.1
type: Protein
SIO_000068: ncbiprotein

position:64659:-1
position: 64659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67747:-1
position: 67747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67732-67747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67159-67211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66947-67051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66579-66813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64659-66196:-1:exon

LOC112067947
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(68276..95265)
location: region:68276-95265:-1
so has part: feature:68276-95265:-1:exon
subclass of: SO_0000010

112067947
type: Gene
SIO_000068: ncbigene

position:68276:-1
position: 68276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95265:-1
position: 95265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68276-95265:-1:exon

LOC112067947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC112067947
product: uncharacterized LOC112067947
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024134870.1
SIO_010081: LOC112067947
subclass of: SO_0000673
so part of: LOC112067947
location: complement(join(68276..68295,68391..68820,68924..68985,79697..79787,79920..80002,95097..95265))
location: region:68276-95265:-1
so has part: feature:95097-95265:-1:exon
so has part: feature:79920-80002:-1:exon
so has part: feature:79697-79787:-1:exon
so has part: feature:68924-68985:-1:exon
so has part: feature:68391-68820:-1:exon
so has part: feature:68276-68295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95097-95265:-1:exon

position:95097:-1
position: 95097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79920-80002:-1:exon

position:79920:-1
position: 79920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80002:-1
position: 80002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79697-79787:-1:exon

position:79697:-1
position: 79697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79787:-1
position: 79787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:68924-68985:-1:exon

position:68924:-1
position: 68924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68985:-1
position: 68985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:68391-68820:-1:exon

position:68391:-1
position: 68391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68820:-1
position: 68820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:68276-68295:-1:exon

position:68295:-1
position: 68295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112067947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC112067947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112067947
translation: MSDSSGAANSNSWTVLTAEETVAETLRPVEEGTEHHEDTPSHTAAEKPTESRPGEDAVSAEESHSVKLQQETQETQPERDKDYTPVVESPTHDLPFDPALDSTSASVAPPSSLLEVPAPTGXDPDTHSQSRSLPGNPAPPISDPDSFSDSYTHISSSPDLEEPPALLLNTEPPEEVGLVQEAEGYIQDVHHHYEEGLGQEEKESDLSEXGAKTANVQWL
SIO_010081: LOC112067947
subclass of: SO_0000673
so part of: LOC112067947
location: complement(join(68276..68295,68391..68820,68924..68985,79697..79787,79920..79976))
location: region:68276-79976:-1
so has part: feature:79920-79976:-1:exon
so has part: feature:79697-79787:-1:exon
so has part: feature:68924-68985:-1:exon
so has part: feature:68391-68820:-1:exon
so has part: feature:68276-68295:-1:exon

XP_023990638.1
type: Protein
SIO_000068: ncbiprotein

position:79976:-1
position: 79976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79920-79976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79697-79787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68924-68985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68391-68820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68276-68295:-1:exon

LOC111958994
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95537..97093)
location: region:95537-97093:-1
so has part: feature:95537-97093:-1:exon
subclass of: SO_0000010

111958994
type: Gene
SIO_000068: ncbigene

position:95537:-1
position: 95537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97093:-1
position: 97093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95537-97093:-1:exon

LOC111958994
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958994
product: lens epithelial cell protein LEP503
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_023980384.2
SIO_010081: LOC111958994
subclass of: SO_0000673
so part of: LOC111958994
location: complement(join(95537..95832,96051..96081,96168..97093))
location: region:95537-97093:-1
so has part: feature:96168-97093:-1:exon
so has part: feature:96051-96081:-1:exon
so has part: feature:95537-95832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96168-97093:-1:exon

position:96168:-1
position: 96168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96051-96081:-1:exon

position:96051:-1
position: 96051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96081:-1
position: 96081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95537-95832:-1:exon

position:95832:-1
position: 95832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958994
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens epithelial cell protein LEP503
translation: MHPQRPLPQAMPSSLGQNLRDMAMGLGRGKNFLGGNIAYGFIQSLKECFYFVLCCWCIKEILD
SIO_010081: LOC111958994
subclass of: SO_0000673
so part of: LOC111958994
location: complement(96207..96398)
location: region:96207-96398:-1
so has part: feature:96207-96398:-1:exon

XP_023836152.1
type: Protein
SIO_000068: ncbiprotein

position:96207:-1
position: 96207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96398:-1
position: 96398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96207-96398:-1:exon

shc1
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: shc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97868..138255)
location: region:97868-138255:-1
so has part: feature:97868-138255:-1:exon
subclass of: SO_0000010

111959065
type: Gene
SIO_000068: ncbigene

position:97868:-1
position: 97868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138255:-1
position: 138255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97868-138255:-1:exon

shc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: shc1
product: SHC adaptor protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023980487.2
SIO_010081: shc1
subclass of: SO_0000673
so part of: shc1
location: complement(join(97868..101197,101343..101587,101873..102001,103561..103618,103912..104062,104144..104270,111464..111515,114723..114842,115575..115638,116737..116807,117135..117299,137921..138255))
location: region:97868-138255:-1
so has part: feature:137921-138255:-1:exon
so has part: feature:117135-117299:-1:exon
so has part: feature:116737-116807:-1:exon
so has part: feature:115575-115638:-1:exon
so has part: feature:114723-114842:-1:exon
so has part: feature:111464-111515:-1:exon
so has part: feature:104144-104270:-1:exon
so has part: feature:103912-104062:-1:exon
so has part: feature:103561-103618:-1:exon
so has part: feature:101873-102001:-1:exon
so has part: feature:101343-101587:-1:exon
so has part: feature:97868-101197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137921-138255:-1:exon

position:137921:-1
position: 137921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117135-117299:-1:exon

position:117135:-1
position: 117135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117299:-1
position: 117299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116737-116807:-1:exon

position:116737:-1
position: 116737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116807:-1
position: 116807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:115575-115638:-1:exon

position:115575:-1
position: 115575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115638:-1
position: 115638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114723-114842:-1:exon

position:114723:-1
position: 114723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114842:-1
position: 114842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:111464-111515:-1:exon

position:111464:-1
position: 111464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111515:-1
position: 111515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:104144-104270:-1:exon

position:104144:-1
position: 104144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104270:-1
position: 104270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:103912-104062:-1:exon

position:103912:-1
position: 103912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104062:-1
position: 104062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:103561-103618:-1:exon

position:103561:-1
position: 103561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103618:-1
position: 103618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:101873-102001:-1:exon

position:101873:-1
position: 101873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102001:-1
position: 102001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:101343-101587:-1:exon

position:101343:-1
position: 101343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101587:-1
position: 101587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:97868-101197:-1:exon

position:101197:-1
position: 101197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

shc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: shc1
product: SHC adaptor protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_023980488.2
SIO_010081: shc1
subclass of: SO_0000673
so part of: shc1
location: complement(join(97868..101197,101343..101587,101873..101992,103561..103618,103912..104062,104144..104270,111464..111515,114723..114842,115575..115638,116737..116807,117135..117299,137921..138247))
location: region:97868-138247:-1
so has part: feature:137921-138247:-1:exon
so has part: feature:117135-117299:-1:exon
so has part: feature:116737-116807:-1:exon
so has part: feature:115575-115638:-1:exon
so has part: feature:114723-114842:-1:exon
so has part: feature:111464-111515:-1:exon
so has part: feature:104144-104270:-1:exon
so has part: feature:103912-104062:-1:exon
so has part: feature:103561-103618:-1:exon
so has part: feature:101873-101992:-1:exon
so has part: feature:101343-101587:-1:exon
so has part: feature:97868-101197:-1:exon

position:138247:-1
position: 138247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137921-138247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117135-117299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116737-116807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:115575-115638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114723-114842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111464-111515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104144-104270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103912-104062:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103561-103618:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101873-101992:-1:exon

position:101992:-1
position: 101992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:101343-101587:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97868-101197:-1:exon

shc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: shc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X2
translation: MNRLGGASRRARVEGGQLGGDEWTRHGSFVNKPTRGWLHSDHVVSTTGVAYSVRYMGCVEVLQSMRALDFNTRTQVTREAISVVCEAVPGAKGAQRKRKPSSRCMTSILGKRNLQFAGMTISLTVSTSSLNLLASDCKQDTAEYVAYVAKDPVNQRACHILECSEGLAQEVISTIGQAFELRFKQYLKNPPKLVTPHDRMAPFDGSAWEEEEDEGAPPPADVPYYNNFPGKQPPPGGLVDMRARPGATLPYGQPGQNDIHKQPLPPLPMGAKEGGRDLCDDPSYVNVDKPRPTTAAANGNAHRDAFDMKPFDDSLGVSGLGVSAAPPLVEQLQCEAWFHGSLSRRQAERLLTRDGDFLVRESGTTPGQYVLTGQQGGQPKHLLLVDPEGVVRTKDHHFESVSHLISYHMDNRLPIVSAGSEVCLQQPVEHRA
SIO_010081: shc1
subclass of: SO_0000673
so part of: shc1
location: complement(join(101069..101197,101343..101587,101873..101992,103561..103618,103912..104062,104144..104270,111464..111515,114723..114842,115575..115638,116737..116807,117135..117296))
location: region:101069-117296:-1
so has part: feature:117135-117296:-1:exon
so has part: feature:116737-116807:-1:exon
so has part: feature:115575-115638:-1:exon
so has part: feature:114723-114842:-1:exon
so has part: feature:111464-111515:-1:exon
so has part: feature:104144-104270:-1:exon
so has part: feature:103912-104062:-1:exon
so has part: feature:103561-103618:-1:exon
so has part: feature:101873-101992:-1:exon
so has part: feature:101343-101587:-1:exon
so has part: feature:101069-101197:-1:exon

XP_023836256.1
type: Protein
SIO_000068: ncbiprotein

position:101069:-1
position: 101069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117296:-1
position: 117296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117135-117296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116737-116807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115575-115638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114723-114842:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111464-111515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104144-104270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103912-104062:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103561-103618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101873-101992:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101343-101587:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:101069-101197:-1:exon

shc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: shc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X1
translation: MNRLGGASRRARVEGGQLGGDEWTRHGSFVNKPTRGWLHSDHVVSTTGVAYSVRYMGCVEVLQSMRALDFNTRTQVTREAISVVCEAVPGAKGAQRKRKPSSRCMTSILGKRNLQFAGMTISLTVSTSSLNLLASDCKQDTAEYVAYVAKDPVNQRACHILECSEGLAQEVISTIGQAFELRFKQYLKNPPKLVTPHDRMAPFDGSAWEEEEDEGAPPPADVPYYNNFPGKQPPPGGLVDMRARPGATLPYGQPGQNDIHKQPLPPLPIVSVGAKEGGRDLCDDPSYVNVDKPRPTTAAANGNAHRDAFDMKPFDDSLGVSGLGVSAAPPLVEQLQCEAWFHGSLSRRQAERLLTRDGDFLVRESGTTPGQYVLTGQQGGQPKHLLLVDPEGVVRTKDHHFESVSHLISYHMDNRLPIVSAGSEVCLQQPVEHRA
SIO_010081: shc1
subclass of: SO_0000673
so part of: shc1
location: complement(join(101069..101197,101343..101587,101873..102001,103561..103618,103912..104062,104144..104270,111464..111515,114723..114842,115575..115638,116737..116807,117135..117296))
location: region:101069-117296:-1
so has part: feature:117135-117296:-1:exon
so has part: feature:116737-116807:-1:exon
so has part: feature:115575-115638:-1:exon
so has part: feature:114723-114842:-1:exon
so has part: feature:111464-111515:-1:exon
so has part: feature:104144-104270:-1:exon
so has part: feature:103912-104062:-1:exon
so has part: feature:103561-103618:-1:exon
so has part: feature:101873-102001:-1:exon
so has part: feature:101343-101587:-1:exon
so has part: feature:101069-101197:-1:exon

XP_023836255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117135-117296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116737-116807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115575-115638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114723-114842:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111464-111515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104144-104270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103912-104062:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103561-103618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101873-102001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101343-101587:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:101069-101197:-1:exon

LOC111958587
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 119024..125355
location: region:119024-125355:1
so has part: feature:119024-125355:1:exon

111958587
type: Gene
SIO_000068: ncbigene

position:119024:1
position: 119024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125355:1
position: 125355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119024-125355:1:exon

LOC111958587
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958587
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 68% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958587
subclass of: SO_0000673
so part of: LOC111958587
location: 119024..119933
location: region:119024-119933:1
so has part: feature:119024-119933:1:exon

position:119933:1
position: 119933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119024-119933:1:exon

LOC111958587
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958587
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 68% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958587
subclass of: SO_0000673
so part of: LOC111958587
location: 120265..120337
location: region:120265-120337:1
so has part: feature:120265-120337:1:exon

position:120265:1
position: 120265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120337:1
position: 120337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120265-120337:1:exon

LOC111958587
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958587
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 68% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958587
subclass of: SO_0000673
so part of: LOC111958587
location: 125343..125355
location: region:125343-125355:1
so has part: feature:125343-125355:1:exon

position:125343:1
position: 125343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125343-125355:1:exon

LOC111958922
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 139255..150370
location: region:139255-150370:1
so has part: feature:139255-150370:1:exon
subclass of: SO_0000010

111958922
type: Gene
SIO_000068: ncbigene

position:139255:1
position: 139255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150370:1
position: 150370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139255-150370:1:exon

LOC111958922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958922
product: FAD synthase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023980280.2
SIO_010081: LOC111958922
subclass of: SO_0000673
so part of: LOC111958922
location: join(139255..139362,141069..141286,141429..141806,147904..148021,148300..148562,148684..148831,148985..149083,149318..149507,149694..149767,149874..150370)
location: region:139255-150370:1
so has part: feature:139255-139362:1:exon
so has part: feature:141069-141286:1:exon
so has part: feature:141429-141806:1:exon
so has part: feature:147904-148021:1:exon
so has part: feature:148300-148562:1:exon
so has part: feature:148684-148831:1:exon
so has part: feature:148985-149083:1:exon
so has part: feature:149318-149507:1:exon
so has part: feature:149694-149767:1:exon
so has part: feature:149874-150370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139255-139362:1:exon

position:139362:1
position: 139362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141069-141286:1:exon

position:141069:1
position: 141069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141286:1
position: 141286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141429-141806:1:exon

position:141429:1
position: 141429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141806:1
position: 141806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147904-148021:1:exon

position:147904:1
position: 147904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148021:1
position: 148021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148300-148562:1:exon

position:148300:1
position: 148300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148562:1
position: 148562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:148684-148831:1:exon

position:148684:1
position: 148684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148831:1
position: 148831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:148985-149083:1:exon

position:148985:1
position: 148985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149083:1
position: 149083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:149318-149507:1:exon

position:149318:1
position: 149318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149507:1
position: 149507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:149694-149767:1:exon

position:149694:1
position: 149694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149767:1
position: 149767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:149874-150370:1:exon

position:149874:1
position: 149874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958922
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: FAD synthase
translation: MLXAVSRLSRAAVRVRRVAAQVQVTTVTMAQNHQSCGXSCQQKGGAVTAAILIIGDEILKGHTVDTNSAFLSRALRKLGVCVQRVTVIPDQQEVISKEVALLAPQYTHLLTSGGIGPTHDDVTFESVAMAFEEELHAHPELTRLVEEFFGVVDRESAAMKLAMVPRSAKLNYGTDPQTGQPLRYPLVSVRNVYIFPGIPSLLERAFNGLEHLFAGSGTTFHTREVIVDADEALIAPVLTRLQAGWGKRAALGSYPDWLSNYHRVRLVLDSDSFEEVEKARAQLLEEMPKGSVVPLVTDPVSIATEEVYTLANSGTPLGDKVANALKTIETALDQYSAGEICVGFNGGXDCTALLHLYYAALKRRYPEGKDKVKALYIRIVSPFPEMERFLQDTIKRYDLEIFSVEGSIRQALSDVQERRPELRAVCMGTRRTDPYSHTLTPMCLTDPGWPDYMRVNPLLDWTYHDIWSFLRTLYVPYCILYDKGYTSLGSMDNTCRNPALQVVDGRGVSRYRPAHLLENEEMERDSRE
SIO_010081: LOC111958922
subclass of: SO_0000673
so part of: LOC111958922
location: join(141107..141286,141429..141806,147904..148021,148300..148562,148684..148831,148985..149083,149318..149507,149694..149767,149874..150009)
location: region:141107-150009:1
so has part: feature:141107-141286:1:exon
so has part: feature:141429-141806:1:exon
so has part: feature:147904-148021:1:exon
so has part: feature:148300-148562:1:exon
so has part: feature:148684-148831:1:exon
so has part: feature:148985-149083:1:exon
so has part: feature:149318-149507:1:exon
so has part: feature:149694-149767:1:exon
so has part: feature:149874-150009:1:exon

XP_023836048.1
type: Protein
SIO_000068: ncbiprotein

position:141107:1
position: 141107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150009:1
position: 150009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141107-141286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141429-141806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147904-148021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148300-148562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148684-148831:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148985-149083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149318-149507:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149694-149767:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149874-150009:1:exon

tmem238
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: tmem238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(266081..267485)
location: region:266081-267485:-1
so has part: feature:266081-267485:-1:exon
subclass of: SO_0000010

111959069
type: Gene
SIO_000068: ncbigene

position:266081:-1
position: 266081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267485:-1
position: 267485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266081-267485:-1:exon

tmem238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: tmem238
product: transmembrane protein 238, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023980494.2
SIO_010081: tmem238
subclass of: SO_0000673
so part of: tmem238
location: complement(join(266081..266683,267312..267485))
location: region:266081-267485:-1
so has part: feature:267312-267485:-1:exon
so has part: feature:266081-266683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267312-267485:-1:exon

position:267312:-1
position: 267312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266081-266683:-1:exon

position:266683:-1
position: 266683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmem238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: tmem238
product: transmembrane protein 238, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_023980493.1
SIO_010081: tmem238
subclass of: SO_0000673
so part of: tmem238
location: complement(join(266081..266683,267170..267290))
location: region:266081-267290:-1
so has part: feature:267170-267290:-1:exon
so has part: feature:266081-266683:-1:exon

position:267290:-1
position: 267290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267170-267290:-1:exon

position:267170:-1
position: 267170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266081-266683:-1:exon

tmem238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: tmem238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 238
translation: MAQHYDGLSHCKLALAFAILMDLLGVSALLVGVFXPLEIKGQDFGDLLVYSGALLMLMSLGGWVMWYSGNLEGLTSXKELXGTMGAMDRLARSLSRRIRLPRSHSSPS
SIO_010081: tmem238
subclass of: SO_0000673
so part of: tmem238
location: complement(266347..266673)
location: region:266347-266673:-1
so has part: feature:266347-266673:-1:exon

XP_023836261.1
type: Protein
SIO_000068: ncbiprotein

position:266347:-1
position: 266347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266673:-1
position: 266673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266347-266673:-1:exon

tmem238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: tmem238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 238
translation: MAQHYDGLSHCKLALAFAILMDLLGVSALLVGVFXPLEIKGQDFGDLLVYSGALLMLMSLGGWVMWYSGNLEGLTSXKELXGTMGAMDRLARSLSRRIRLPRSHSSPS
SIO_010081: tmem238
subclass of: SO_0000673
so part of: tmem238
location: complement(266347..266673)
location: region:266347-266673:-1
so has part: feature:266347-266673:-1:exon

XP_023836262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266347-266673:-1:exon

LOC111958926
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 268370..271229
location: region:268370-271229:1
so has part: feature:268370-271229:1:exon
subclass of: SO_0000010

111958926
type: Gene
SIO_000068: ncbigene

position:268370:1
position: 268370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271229:1
position: 271229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268370-271229:1:exon

LOC111958926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958926
product: uncharacterized LOC111958926, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_023980286.1
SIO_010081: LOC111958926
subclass of: SO_0000673
so part of: LOC111958926
location: join(268370..268512,269070..269149,269273..269371,269561..269791,270615..270671,270835..271228)
location: region:268370-271228:1
so has part: feature:268370-268512:1:exon
so has part: feature:269070-269149:1:exon
so has part: feature:269273-269371:1:exon
so has part: feature:269561-269791:1:exon
so has part: feature:270615-270671:1:exon
so has part: feature:270835-271228:1:exon

position:271228:1
position: 271228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268370-268512:1:exon

position:268512:1
position: 268512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269070-269149:1:exon

position:269070:1
position: 269070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269149:1
position: 269149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269273-269371:1:exon

position:269273:1
position: 269273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269371:1
position: 269371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269561-269791:1:exon

position:269561:1
position: 269561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269791:1
position: 269791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270615-270671:1:exon

position:270615:1
position: 270615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270671:1
position: 270671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270835-271228:1:exon

position:270835:1
position: 270835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958926
product: uncharacterized LOC111958926, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_023980287.1
SIO_010081: LOC111958926
subclass of: SO_0000673
so part of: LOC111958926
location: join(268575..268818,269070..269149,269273..269371,269561..269791,270615..270671,270835..271229)
location: region:268575-271229:1
so has part: feature:268575-268818:1:exon
so has part: feature:269070-269149:1:exon
so has part: feature:269273-269371:1:exon
so has part: feature:269561-269791:1:exon
so has part: feature:270615-270671:1:exon
so has part: feature:270835-271229:1:exon

position:268575:1
position: 268575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268575-268818:1:exon

position:268818:1
position: 268818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269070-269149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269273-269371:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269561-269791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270615-270671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270835-271229:1:exon

LOC111958926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111958926
translation: MQEGNINDALPSSKNHTGTHPMQTPKNEDAYEISIPFEENNFEQQGFFNQNEQSFDESPPPSGAPPPGSSYLLITNLRTQLQISLEKNSWLHKRIEDLEEERDFLRCQLDRFIFSTKTQGHQNQGPSESQYSNGYDSRRFEWKPRREGERPAEQKSEPQRFTSRQIFQRRPSPTAMAPPKNHTSSTIANQMAAMSSMFSSGASQTLLQGHSSGSSSAIRATMSDMNAHXSVGPGNGIQTRG
SIO_010081: LOC111958926
subclass of: SO_0000673
so part of: LOC111958926
location: join(269080..269149,269273..269371,269561..269791,270615..270671,270835..271103)
location: region:269080-271103:1
so has part: feature:269080-269149:1:exon
so has part: feature:269273-269371:1:exon
so has part: feature:269561-269791:1:exon
so has part: feature:270615-270671:1:exon
so has part: feature:270835-271103:1:exon

XP_023836054.1
type: Protein
SIO_000068: ncbiprotein

position:269080:1
position: 269080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271103:1
position: 271103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269080-269149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269273-269371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269561-269791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270615-270671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270835-271103:1:exon

LOC111958926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111958926
translation: MQEGNINDALPSSKNHTGTHPMQTPKNEDAYEISIPFEENNFEQQGFFNQNEQSFDESPPPSGAPPPGSSYLLITNLRTQLQISLEKNSWLHKRIEDLEEERDFLRCQLDRFIFSTKTQGHQNQGPSESQYSNGYDSRRFEWKPRREGERPAEQKSEPQRFTSRQIFQRRPSPTAMAPPKNHTSSTIANQMAAMSSMFSSGASQTLLQGHSSGSSSAIRATMSDMNAHXSVGPGNGIQTRG
SIO_010081: LOC111958926
subclass of: SO_0000673
so part of: LOC111958926
location: join(269080..269149,269273..269371,269561..269791,270615..270671,270835..271103)
location: region:269080-271103:1
so has part: feature:269080-269149:1:exon
so has part: feature:269273-269371:1:exon
so has part: feature:269561-269791:1:exon
so has part: feature:270615-270671:1:exon
so has part: feature:270835-271103:1:exon

XP_023836055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269080-269149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269273-269371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269561-269791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270615-270671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270835-271103:1:exon

LOC111958885
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279448..>285151
location: region:279448-285151:1
so has part: feature:279448-285151:1:exon
subclass of: SO_0000010

111958885
type: Gene
SIO_000068: ncbigene

position:279448:1
position: 279448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285151:1
position: 285151
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279448-285151:1:exon

LOC111958885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958885
product: splicing factor U2AF 65 kDa subunit
inference: similar to RNA sequence (same species):INSD:GEKT01051499.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 410 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023980204.1
SIO_010081: LOC111958885
subclass of: SO_0000673
so part of: LOC111958885
location: join(279448..280031,280452..280514,280714..280855,281665..281703,282248..282357,282545..282696,283128..283244,283416..283554,284590..284669,285011..>285151)
location: region:279448-285151:1
so has part: feature:279448-280031:1:exon
so has part: feature:280452-280514:1:exon
so has part: feature:280714-280855:1:exon
so has part: feature:281665-281703:1:exon
so has part: feature:282248-282357:1:exon
so has part: feature:282545-282696:1:exon
so has part: feature:283128-283244:1:exon
so has part: feature:283416-283554:1:exon
so has part: feature:284590-284669:1:exon
so has part: feature:285011-285151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279448-280031:1:exon

position:280031:1
position: 280031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280452-280514:1:exon

position:280452:1
position: 280452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280514:1
position: 280514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280714-280855:1:exon

position:280714:1
position: 280714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280855:1
position: 280855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:281665-281703:1:exon

position:281665:1
position: 281665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281703:1
position: 281703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:282248-282357:1:exon

position:282248:1
position: 282248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282357:1
position: 282357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:282545-282696:1:exon

position:282545:1
position: 282545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282696:1
position: 282696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:283128-283244:1:exon

position:283128:1
position: 283128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283244:1
position: 283244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:283416-283554:1:exon

position:283416:1
position: 283416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283554:1
position: 283554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:284590-284669:1:exon

position:284590:1
position: 284590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284669:1
position: 284669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:285011-285151:1:exon

position:285011:1
position: 285011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958885
inference: similar to RNA sequence (same species):INSD:GEKT01051499.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 410 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit
translation: MSDFDEFERQLSENKQAQLVEHGACNARIVRSIPGNTPEKDKENRHHRRSPSRSRSRERKRRSRDKDRRSRDRRGDSKERRPRRSSPSQQQPQEIAVSRSPHRETKKKNKVKKYWDVPPPGFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFA
SIO_010081: LOC111958885
subclass of: SO_0000673
so part of: LOC111958885
location: join(279983..280031,280452..280514,280714..280855,281665..281703,282248..282357,282545..282696,283128..283244,283416..283554,284590..284669,285011..>285151)
location: region:279983-285151:1
so has part: feature:279983-280031:1:exon
so has part: feature:280452-280514:1:exon
so has part: feature:280714-280855:1:exon
so has part: feature:281665-281703:1:exon
so has part: feature:282248-282357:1:exon
so has part: feature:282545-282696:1:exon
so has part: feature:283128-283244:1:exon
so has part: feature:283416-283554:1:exon
so has part: feature:284590-284669:1:exon
so has part: feature:285011-285151:1:exon

XP_023835972.1
type: Protein
SIO_000068: ncbiprotein

position:279983:1
position: 279983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279983-280031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280452-280514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280714-280855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:281665-281703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282248-282357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282545-282696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:283128-283244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283416-283554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284590-284669:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285011-285151:1:exon

LOC111958589
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(299046..306962)
location: region:299046-306962:-1
so has part: feature:299046-306962:-1:exon

111958589
type: Gene
SIO_000068: ncbigene

position:299046:-1
position: 299046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306962:-1
position: 306962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299046-306962:-1:exon

LOC111958589
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958589
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 60% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958589
subclass of: SO_0000673
so part of: LOC111958589
location: complement(299046..299126)
location: region:299046-299126:-1
so has part: feature:299046-299126:-1:exon

position:299126:-1
position: 299126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299046-299126:-1:exon

LOC111958589
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958589
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 60% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958589
subclass of: SO_0000673
so part of: LOC111958589
location: complement(299408..299588)
location: region:299408-299588:-1
so has part: feature:299408-299588:-1:exon

position:299408:-1
position: 299408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299588:-1
position: 299588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299408-299588:-1:exon

LOC111958589
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958589
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 60% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958589
subclass of: SO_0000673
so part of: LOC111958589
location: complement(306712..306962)
location: region:306712-306962:-1
so has part: feature:306712-306962:-1:exon

position:306712:-1
position: 306712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306712-306962:-1:exon

LOC111958925
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 334339..341579
location: region:334339-341579:1
so has part: feature:334339-341579:1:exon
subclass of: SO_0000010

111958925
type: Gene
SIO_000068: ncbigene

position:334339:1
position: 334339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341579:1
position: 341579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334339-341579:1:exon

LOC111958925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958925
product: apolipoprotein C-I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023980285.1
SIO_010081: LOC111958925
subclass of: SO_0000673
so part of: LOC111958925
location: join(334339..334445,341054..341195,341324..341579)
location: region:334339-341579:1
so has part: feature:334339-334445:1:exon
so has part: feature:341054-341195:1:exon
so has part: feature:341324-341579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:334339-334445:1:exon

position:334445:1
position: 334445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341054-341195:1:exon

position:341054:1
position: 341054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341195:1
position: 341195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341324-341579:1:exon

position:341324:1
position: 341324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein C-I isoform X2
translation: MKLSIAIAVLMLVFAAHTEAQEAEKTIEEHFATFGNQMKELSDDLTVKTKDIVEKIGDSEFITKTRNWFTEQFDKMKAKVDENFPKQ
SIO_010081: LOC111958925
subclass of: SO_0000673
so part of: LOC111958925
location: join(334391..334445,341054..341195,341324..341390)
location: region:334391-341390:1
so has part: feature:334391-334445:1:exon
so has part: feature:341054-341195:1:exon
so has part: feature:341324-341390:1:exon

XP_023836053.1
type: Protein
SIO_000068: ncbiprotein

position:334391:1
position: 334391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341390:1
position: 341390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334391-334445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341054-341195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341324-341390:1:exon

LOC111958925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958925
product: apolipoprotein C-I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023980283.1
SIO_010081: LOC111958925
subclass of: SO_0000673
so part of: LOC111958925
location: join(336006..336112,336829..336895,341054..341195,341324..341573)
location: region:336006-341573:1
so has part: feature:336006-336112:1:exon
so has part: feature:336829-336895:1:exon
so has part: feature:341054-341195:1:exon
so has part: feature:341324-341573:1:exon

position:336006:1
position: 336006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341573:1
position: 341573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336006-336112:1:exon

position:336112:1
position: 336112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336829-336895:1:exon

position:336829:1
position: 336829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336895:1
position: 336895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341054-341195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341324-341573:1:exon

LOC111958925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein C-I isoform X1
translation: MKLSIAIAVLMLVFAAHTEAQEAEKTIEEHFATFGNQMKELSDDLTVKTKDIVEKIGDSEFITKTRNWFTEQFDKMKAKVDENFPKQ
SIO_010081: LOC111958925
subclass of: SO_0000673
so part of: LOC111958925
location: join(336841..336895,341054..341195,341324..341390)
location: region:336841-341390:1
so has part: feature:336841-336895:1:exon
so has part: feature:341054-341195:1:exon
so has part: feature:341324-341390:1:exon

XP_023836051.1
type: Protein
SIO_000068: ncbiprotein

position:336841:1
position: 336841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336841-336895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341054-341195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341324-341390:1:exon

LOC111959005
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 343320..345301
location: region:343320-345301:1
so has part: feature:343320-345301:1:exon
subclass of: SO_0000011

111959005
type: Gene
SIO_000068: ncbigene

position:343320:1
position: 343320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345301:1
position: 345301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343320-345301:1:exon

LOC111959005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111959005
product: uncharacterized LOC111959005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XR_002876606.1
SIO_010081: LOC111959005
subclass of: SO_0000673
so part of: LOC111959005
location: join(343320..343656,343930..343975,344109..344193,345236..345301)
location: region:343320-345301:1
so has part: feature:343320-343656:1:exon
so has part: feature:343930-343975:1:exon
so has part: feature:344109-344193:1:exon
so has part: feature:345236-345301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343320-343656:1:exon

position:343656:1
position: 343656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343930-343975:1:exon

position:343930:1
position: 343930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343975:1
position: 343975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344109-344193:1:exon

position:344109:1
position: 344109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344193:1
position: 344193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345236-345301:1:exon

position:345236:1
position: 345236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959060
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361514..363640
location: region:361514-363640:1
so has part: feature:361514-363640:1:exon
subclass of: SO_0000010

111959060
type: Gene
SIO_000068: ncbigene

position:361514:1
position: 361514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363640:1
position: 363640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361514-363640:1:exon

LOC111959060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959060
product: apolipoprotein C-II, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_023980482.1
SIO_010081: LOC111959060
subclass of: SO_0000673
so part of: LOC111959060
location: join(361514..361730,362235..362304,362538..362600,362939..363140,363234..363640)
location: region:361514-363640:1
so has part: feature:361514-361730:1:exon
so has part: feature:362235-362304:1:exon
so has part: feature:362538-362600:1:exon
so has part: feature:362939-363140:1:exon
so has part: feature:363234-363640:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361514-361730:1:exon

position:361730:1
position: 361730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:362235-362304:1:exon

position:362235:1
position: 362235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362304:1
position: 362304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362538-362600:1:exon

position:362538:1
position: 362538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362600:1
position: 362600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:362939-363140:1:exon

position:362939:1
position: 362939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363140:1
position: 363140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:363234-363640:1:exon

position:363234:1
position: 363234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959060
product: apolipoprotein C-II, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023980481.1
SIO_010081: LOC111959060
subclass of: SO_0000673
so part of: LOC111959060
location: join(361516..361730,362538..362600,362939..363140,363234..363640)
location: region:361516-363640:1
so has part: feature:361516-361730:1:exon
so has part: feature:362538-362600:1:exon
so has part: feature:362939-363140:1:exon
so has part: feature:363234-363640:1:exon

position:361516:1
position: 361516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361516-361730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362538-362600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362939-363140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363234-363640:1:exon

LOC111959060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein C-II
translation: MNKILIITVLVTLLGLNAQDLRLPRQAEEGMPEEPVADVAEADGEQGTLEKLTSAVKSYYETSISTASSWLDSIKGLKLEEKAKNAFVDTSMAVSTYSGILQDQFYHILYQQ
SIO_010081: LOC111959060
subclass of: SO_0000673
so part of: LOC111959060
location: join(362552..362600,362939..363140,363234..363321)
location: region:362552-363321:1
so has part: feature:362552-362600:1:exon
so has part: feature:362939-363140:1:exon
so has part: feature:363234-363321:1:exon

XP_023836249.1
type: Protein
SIO_000068: ncbiprotein

position:362552:1
position: 362552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363321:1
position: 363321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362552-362600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362939-363140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:363234-363321:1:exon

LOC111959060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein C-II
translation: MNKILIITVLVTLLGLNAQDLRLPRQAEEGMPEEPVADVAEADGEQGTLEKLTSAVKSYYETSISTASSWLDSIKGLKLEEKAKNAFVDTSMAVSTYSGILQDQFYHILYQQ
SIO_010081: LOC111959060
subclass of: SO_0000673
so part of: LOC111959060
location: join(362552..362600,362939..363140,363234..363321)
location: region:362552-363321:1
so has part: feature:362552-362600:1:exon
so has part: feature:362939-363140:1:exon
so has part: feature:363234-363321:1:exon

XP_023836250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362552-362600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362939-363140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:363234-363321:1:exon

LOC111959119
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 369720..371591
location: region:369720-371591:1
so has part: feature:369720-371591:1:exon
subclass of: SO_0000010

111959119
type: Gene
SIO_000068: ncbigene

position:369720:1
position: 369720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371591:1
position: 371591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369720-371591:1:exon

LOC111959119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959119
product: trypsinogen-like protein 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_023980565.1
SIO_010081: LOC111959119
subclass of: SO_0000673
so part of: LOC111959119
location: join(369720..369868,370353..370515,370669..371169,371373..371591)
location: region:369720-371591:1
so has part: feature:369720-369868:1:exon
so has part: feature:370353-370515:1:exon
so has part: feature:370669-371169:1:exon
so has part: feature:371373-371591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369720-369868:1:exon

position:369868:1
position: 369868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370353-370515:1:exon

position:370353:1
position: 370353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370515:1
position: 370515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370669-371169:1:exon

position:370669:1
position: 370669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371169:1
position: 371169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371373-371591:1:exon

position:371373:1
position: 371373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959119
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: trypsinogen-like protein 3
translation: MKLLLLALALGCTAAVPVKQDGALLHEVFQPHSRPWQVYTKGGWYREGRCSGALINEWWVLTAWNFVEPGHTMVSLGEHDLTVEEGTEQHIWVARYVQHGPXARGPSHSLAMVKLSEPARFTQHVMPVAJPTRCTQLHEKCLVSGWGSTVPGQGEWTIKPGEGYMPQPNLMEYKHQINSHESLCLSLHTDEPKLILKCETQRVIDDKMCQXAFPLYWIEHAFCAKTIISTDNCLSDQGSTVVCGGELQGLFWSSSSDVGLYTRLCLYLDWISDTMNTPDPTPEPAWTTAAAATTW
SIO_010081: LOC111959119
subclass of: SO_0000673
so part of: LOC111959119
location: join(369829..369868,370353..370515,370669..371169,371373..371558)
location: region:369829-371558:1
so has part: feature:369829-369868:1:exon
so has part: feature:370353-370515:1:exon
so has part: feature:370669-371169:1:exon
so has part: feature:371373-371558:1:exon

XP_023836333.1
type: Protein
SIO_000068: ncbiprotein

position:369829:1
position: 369829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371558:1
position: 371558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369829-369868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370353-370515:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370669-371169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371373-371558:1:exon

LOC111958867
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <391069..393451
location: region:391069-393451:1
so has part: feature:391069-393451:1:exon
subclass of: SO_0000010

111958867
type: Gene
SIO_000068: ncbigene

position:391069:1
position: 391069
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:393451:1
position: 393451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391069-393451:1:exon

LOC111958867
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958867
product: tyrosine-protein kinase STYK1
inference: similar to RNA sequence (same species):INSD:GGAP01026953.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1010 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_023980187.1
SIO_010081: LOC111958867
subclass of: SO_0000673
so part of: LOC111958867
location: join(<391069..391277,391369..391409,391587..391683,392845..393451)
location: region:391069-393451:1
so has part: feature:391069-391277:1:exon
so has part: feature:391369-391409:1:exon
so has part: feature:391587-391683:1:exon
so has part: feature:392845-393451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391069-391277:1:exon

position:391277:1
position: 391277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391369-391409:1:exon

position:391369:1
position: 391369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391409:1
position: 391409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391587-391683:1:exon

position:391587:1
position: 391587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391683:1
position: 391683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:392845-393451:1:exon

position:392845:1
position: 392845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958867
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958867
inference: similar to RNA sequence (same species):INSD:GGAP01026953.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 876 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase STYK1
translation: MSSMSEADSHCKPGDTICNIRVYEQEVIIVPILLLASFLVMLVFIILLRYCPEKVDRIRPQNTVATSRSQRSRRQLHGIDAPLGINPLEHETIALDAPSYSTFCSTHSHPSSNRLSFSMRTPSLPPIPPPKTFIPSSLSSPLPQALTPSFTPMVQPRELPRQRLPESFNLVASLPAAFSLRSDKAVSLYRARMDNRNAVLRVLNDSASATERHNFLGFASFLSQLGPHPFLPELLGVVSLRVPLVTVVEELENRDLLSFLWRCRQDGVGGDPPCEITERRIFTMAKQVASALEFLHSRDLLHGNVRAHSVLVSRELTAKLWGLGGVYTRNTQGATQTEVPGLKKWQAPELLARRPANHSSDVWSFGILLFEMATLGDAPFSDISVNELLQFHQRGKTLRKPANCSNSLYSIIKACCQWKEQDRATLTEVDRKLQSGEKSANDKVLKVPEPINIEQYLQEAGYGESNSYTVF
SIO_010081: LOC111958867
subclass of: SO_0000673
so part of: LOC111958867
location: join(<391069..391277,391369..391409,391587..391683,392845..393037)
location: region:391069-393037:1
so has part: feature:391069-391277:1:exon
so has part: feature:391369-391409:1:exon
so has part: feature:391587-391683:1:exon
so has part: feature:392845-393037:1:exon

XP_023835955.1
type: Protein
SIO_000068: ncbiprotein

position:393037:1
position: 393037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391069-391277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391369-391409:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391587-391683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392845-393037:1:exon

LOC111958865
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(397007..405371)
location: region:397007-405371:-1
so has part: feature:397007-405371:-1:exon
subclass of: SO_0000010

111958865
type: Gene
SIO_000068: ncbigene

position:397007:-1
position: 397007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405371:-1
position: 405371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397007-405371:-1:exon

LOC111958865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958865
product: polyhomeotic-like protein 1
inference: similar to RNA sequence (same species):INSD:GEKT01004392.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 653 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023980186.1
SIO_010081: LOC111958865
subclass of: SO_0000673
so part of: LOC111958865
location: complement(join(397007..>397311,398458..398704,399872..400043,400206..400293,400732..400798,400922..401082,401313..401451,401534..402252,402390..402471,402604..402768,402857..403000,403125..403190,403935..404048,404463..404584,405226..405371))
location: region:397007-405371:-1
so has part: feature:405226-405371:-1:exon
so has part: feature:404463-404584:-1:exon
so has part: feature:403935-404048:-1:exon
so has part: feature:403125-403190:-1:exon
so has part: feature:402857-403000:-1:exon
so has part: feature:402604-402768:-1:exon
so has part: feature:402390-402471:-1:exon
so has part: feature:401534-402252:-1:exon
so has part: feature:401313-401451:-1:exon
so has part: feature:400922-401082:-1:exon
so has part: feature:400732-400798:-1:exon
so has part: feature:400206-400293:-1:exon
so has part: feature:399872-400043:-1:exon
so has part: feature:398458-398704:-1:exon
so has part: feature:397007-397311:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405226-405371:-1:exon

position:405226:-1
position: 405226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:404463-404584:-1:exon

position:404463:-1
position: 404463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404584:-1
position: 404584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403935-404048:-1:exon

position:403935:-1
position: 403935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404048:-1
position: 404048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:403125-403190:-1:exon

position:403125:-1
position: 403125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403190:-1
position: 403190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:402857-403000:-1:exon

position:402857:-1
position: 402857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403000:-1
position: 403000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:402604-402768:-1:exon

position:402604:-1
position: 402604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402768:-1
position: 402768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:402390-402471:-1:exon

position:402390:-1
position: 402390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402471:-1
position: 402471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:401534-402252:-1:exon

position:401534:-1
position: 401534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402252:-1
position: 402252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:401313-401451:-1:exon

position:401313:-1
position: 401313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401451:-1
position: 401451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:400922-401082:-1:exon

position:400922:-1
position: 400922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401082:-1
position: 401082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:400732-400798:-1:exon

position:400732:-1
position: 400732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400798:-1
position: 400798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:400206-400293:-1:exon

position:400206:-1
position: 400206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400293:-1
position: 400293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:399872-400043:-1:exon

position:399872:-1
position: 399872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400043:-1
position: 400043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:398458-398704:-1:exon

position:398458:-1
position: 398458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition
type: FuzzyPosition

position:398704:-1
position: 398704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:397007-397311:-1:exon

position:397311:-1
position: 397311
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

LOC111958865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958865
inference: similar to RNA sequence (same species):INSD:GEKT01004392.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; added 152 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(400040..400042),aa:OTHER)
product: LOW QUALITY PROTEIN: polyhomeotic-like protein 1
translation: MRKTFMDKSWILYLKESMDAGDDQNTGSTNGNAPSAGNSRPPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQQQINSAQQLHNLAAVQQATLAASRQSNSPNHSVSQATTTVNLSTTSGGGIMSNPRLLGPATSVTSSALSQSVLLGGNSAGQGQMYLRVNRSLRAPLAASQLIFMPGGTATAAVATVAQQQPQQQQQQQEVHPTSNAQSDNDQVQNLALHCISTPRVAAVKTEFPDRRDAANYSFSQQQQQHPQQQQQQFSQNTQQQIQPQQQQQQMANKLTSYTHPTALPSINVKTGNQLNMAPTAATSVPASSPTLPLSQLLLSPSGLCQARAVTTVTPAATVTHILVPTSNVPTSSQGYPIGSVAPKTNVNTQTLVVQPLQQSNTNTDKVSHSSGPVHIQPKTSQGHRLPVQLPPRHPPPILPAPPNTGGHHPPHVPVQLVGARQGSVGNSQALAQARSCCPQDKSIAIASTGGNTTAKPAIGSLKRKSETDATNEMAVEPSQICCPPMRDSAPLCPAPMLDSAPKAVPAFSSPPNLSWGVGGQGDRAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPVKEPLAMSVQQADNGGPAVLKCEYCESLAPASQFRGSKRFCSKTCAKRXNVSCSHHFQVSRGRASARPPGPPVPPDSIVRRRGPRRSSSEIACAKIAGRHLPVKECRSESSRSEDVSSCDGEEEEEEEDSPSLSPSSSLSCPRPAHCDPHLDDSAQGSLPLDEANFLSGSPAHWGVEEVCRFISSLQGCEELAAQFLSQEIDGQALLLLREEHLISTMNIKLGPALKICAFINSLRD
SIO_010081: LOC111958865
subclass of: SO_0000673
so part of: LOC111958865
location: complement(join(<398458..398704,399872..400043,400206..400293,400732..400798,400922..401082,401313..401451,401534..402252,402390..402471,402604..402768,402857..403000,403125..403190,403935..404048,404463..404584,405226..405271))
location: region:398458-405271:-1
so has part: feature:405226-405271:-1:exon
so has part: feature:404463-404584:-1:exon
so has part: feature:403935-404048:-1:exon
so has part: feature:403125-403190:-1:exon
so has part: feature:402857-403000:-1:exon
so has part: feature:402604-402768:-1:exon
so has part: feature:402390-402471:-1:exon
so has part: feature:401534-402252:-1:exon
so has part: feature:401313-401451:-1:exon
so has part: feature:400922-401082:-1:exon
so has part: feature:400732-400798:-1:exon
so has part: feature:400206-400293:-1:exon
so has part: feature:399872-400043:-1:exon
so has part: feature:398458-398704:-1:exon

XP_023835954.1
type: Protein
SIO_000068: ncbiprotein

position:405271:-1
position: 405271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405226-405271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404463-404584:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403935-404048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403125-403190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402857-403000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402604-402768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402390-402471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401534-402252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:401313-401451:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:400922-401082:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:400732-400798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:400206-400293:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:399872-400043:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:398458-398704:-1:exon

LOC111958826
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(414279..421963)
location: region:414279-421963:-1
so has part: feature:414279-421963:-1:exon
subclass of: SO_0000010

111958826
type: Gene
SIO_000068: ncbigene

position:414279:-1
position: 414279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421963:-1
position: 421963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414279-421963:-1:exon

LOC111958826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958826
product: cation-dependent mannose-6-phosphate receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023980108.1
SIO_010081: LOC111958826
subclass of: SO_0000673
so part of: LOC111958826
location: complement(join(414279..416700,418300..418426,418826..418956,419146..419255,419437..419603,419944..420122,421912..421963))
location: region:414279-421963:-1
so has part: feature:421912-421963:-1:exon
so has part: feature:419944-420122:-1:exon
so has part: feature:419437-419603:-1:exon
so has part: feature:419146-419255:-1:exon
so has part: feature:418826-418956:-1:exon
so has part: feature:418300-418426:-1:exon
so has part: feature:414279-416700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421912-421963:-1:exon

position:421912:-1
position: 421912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419944-420122:-1:exon

position:419944:-1
position: 419944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420122:-1
position: 420122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419437-419603:-1:exon

position:419437:-1
position: 419437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419603:-1
position: 419603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419146-419255:-1:exon

position:419146:-1
position: 419146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419255:-1
position: 419255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:418826-418956:-1:exon

position:418826:-1
position: 418826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418956:-1
position: 418956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:418300-418426:-1:exon

position:418300:-1
position: 418300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418426:-1
position: 418426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:414279-416700:-1:exon

position:416700:-1
position: 416700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958826
product: cation-dependent mannose-6-phosphate receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_023980107.1
SIO_010081: LOC111958826
subclass of: SO_0000673
so part of: LOC111958826
location: complement(join(414279..416700,418300..418426,418826..418956,419146..419255,419437..419603,419944..420122,421540..421905))
location: region:414279-421905:-1
so has part: feature:421540-421905:-1:exon
so has part: feature:419944-420122:-1:exon
so has part: feature:419437-419603:-1:exon
so has part: feature:419146-419255:-1:exon
so has part: feature:418826-418956:-1:exon
so has part: feature:418300-418426:-1:exon
so has part: feature:414279-416700:-1:exon

position:421905:-1
position: 421905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421540-421905:-1:exon

position:421540:-1
position: 421540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419944-420122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419437-419603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419146-419255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418826-418956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418300-418426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414279-416700:-1:exon

LOC111958826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958826
product: cation-dependent mannose-6-phosphate receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_023980109.1
SIO_010081: LOC111958826
subclass of: SO_0000673
so part of: LOC111958826
location: complement(join(414279..416700,418300..418426,418826..418956,419146..419255,419437..419603,419944..420122,420974..421004))
location: region:414279-421004:-1
so has part: feature:420974-421004:-1:exon
so has part: feature:419944-420122:-1:exon
so has part: feature:419437-419603:-1:exon
so has part: feature:419146-419255:-1:exon
so has part: feature:418826-418956:-1:exon
so has part: feature:418300-418426:-1:exon
so has part: feature:414279-416700:-1:exon

position:421004:-1
position: 421004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420974-421004:-1:exon

position:420974:-1
position: 420974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419944-420122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419437-419603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419146-419255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418826-418956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418300-418426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414279-416700:-1:exon

LOC111958826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cation-dependent mannose-6-phosphate receptor isoform X1
translation: MKVSMSPPHTATSVRLLVLAVQLVLLVCGGQASDDTKRCKLFSESPAERKVLSLLEPLTNKTFSVATKSNMESYTYQFQVCGDAGKTVGAGLVQIDQTGEKSETVLGLYTATQAIGGSDWVMLIYSNGTKYDAHCSKEMRKAIVMISCNRGVEMGKLKVVLEERERDTDCFYLFELDSSVVCPALPSQLSAGSIILIIGFVLLSVYLICGFLYQRLIVGAKGLQQFPNYVFWTQVGNLAADGCNFVFRTQGTEEEPPTYRGVSTEPEEQPQERDDHLLPM
SIO_010081: LOC111958826
subclass of: SO_0000673
so part of: LOC111958826
location: complement(join(416578..416700,418300..418426,418826..418956,419146..419255,419437..419603,419944..420122,421540..421545))
location: region:416578-421545:-1
so has part: feature:421540-421545:-1:exon
so has part: feature:419944-420122:-1:exon
so has part: feature:419437-419603:-1:exon
so has part: feature:419146-419255:-1:exon
so has part: feature:418826-418956:-1:exon
so has part: feature:418300-418426:-1:exon
so has part: feature:416578-416700:-1:exon

XP_023835875.1
type: Protein
SIO_000068: ncbiprotein

position:416578:-1
position: 416578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421545:-1
position: 421545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421540-421545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419944-420122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419437-419603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419146-419255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418826-418956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418300-418426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:416578-416700:-1:exon

LOC111958826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cation-dependent mannose-6-phosphate receptor isoform X2
translation: MSPPHTATSVRLLVLAVQLVLLVCGGQASDDTKRCKLFSESPAERKVLSLLEPLTNKTFSVATKSNMESYTYQFQVCGDAGKTVGAGLVQIDQTGEKSETVLGLYTATQAIGGSDWVMLIYSNGTKYDAHCSKEMRKAIVMISCNRGVEMGKLKVVLEERERDTDCFYLFELDSSVVCPALPSQLSAGSIILIIGFVLLSVYLICGFLYQRLIVGAKGLQQFPNYVFWTQVGNLAADGCNFVFRTQGTEEEPPTYRGVSTEPEEQPQERDDHLLPM
SIO_010081: LOC111958826
subclass of: SO_0000673
so part of: LOC111958826
location: complement(join(416578..416700,418300..418426,418826..418956,419146..419255,419437..419603,419944..420116))
location: region:416578-420116:-1
so has part: feature:419944-420116:-1:exon
so has part: feature:419437-419603:-1:exon
so has part: feature:419146-419255:-1:exon
so has part: feature:418826-418956:-1:exon
so has part: feature:418300-418426:-1:exon
so has part: feature:416578-416700:-1:exon

XP_023835876.1
type: Protein
SIO_000068: ncbiprotein

position:420116:-1
position: 420116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419944-420116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419437-419603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419146-419255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418826-418956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418300-418426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416578-416700:-1:exon

LOC111958826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cation-dependent mannose-6-phosphate receptor isoform X2
translation: MSPPHTATSVRLLVLAVQLVLLVCGGQASDDTKRCKLFSESPAERKVLSLLEPLTNKTFSVATKSNMESYTYQFQVCGDAGKTVGAGLVQIDQTGEKSETVLGLYTATQAIGGSDWVMLIYSNGTKYDAHCSKEMRKAIVMISCNRGVEMGKLKVVLEERERDTDCFYLFELDSSVVCPALPSQLSAGSIILIIGFVLLSVYLICGFLYQRLIVGAKGLQQFPNYVFWTQVGNLAADGCNFVFRTQGTEEEPPTYRGVSTEPEEQPQERDDHLLPM
SIO_010081: LOC111958826
subclass of: SO_0000673
so part of: LOC111958826
location: complement(join(416578..416700,418300..418426,418826..418956,419146..419255,419437..419603,419944..420116))
location: region:416578-420116:-1
so has part: feature:419944-420116:-1:exon
so has part: feature:419437-419603:-1:exon
so has part: feature:419146-419255:-1:exon
so has part: feature:418826-418956:-1:exon
so has part: feature:418300-418426:-1:exon
so has part: feature:416578-416700:-1:exon

XP_023835877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419944-420116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419437-419603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419146-419255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418826-418956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418300-418426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416578-416700:-1:exon

LOC111958985
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 435682..>438123
location: region:435682-438123:1
so has part: feature:435682-438123:1:exon
subclass of: SO_0000010

111958985
type: Gene
SIO_000068: ncbigene

position:435682:1
position: 435682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438123:1
position: 438123
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435682-438123:1:exon

LOC111958985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958985
product: zinc finger CCCH domain-containing protein 13
inference: similar to RNA sequence (same species):INSD:GEKT01072816.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 45 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_023980373.2
SIO_010081: LOC111958985
subclass of: SO_0000673
so part of: LOC111958985
location: join(435682..436207,437069..>438123)
location: region:435682-438123:1
so has part: feature:435682-436207:1:exon
so has part: feature:437069-438123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435682-436207:1:exon

position:436207:1
position: 436207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437069-438123:1:exon

position:437069:1
position: 437069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958985
inference: similar to RNA sequence (same species):INSD:GEKT01072816.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 45 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 13
translation: MGTKRPSLTPFDTFDPSNQSASYRNPQPISQISRETSSRPGTVARTDRERERIREEEWRREREMERLKDKTRNRRKEMEPGPRERNREKECAPISRGREEEREWRERERGRAGERHANGKPTSNLEIRNDRDRDREKERKKGDTFPRMIKHSKERDRRMSAFVEEDVGKEGTRQLERQKGTEMDDWERERETAAKIQRYRDAERDFQRYREREREKERIRAQEDGEKNGGRPMEDKTLRRRERAREAEPDFRERRRDRESKGNDLWSKRDRYMDGEXERXKLXQGERDVRXXDGXSQNYSDREGXDGRREGNTEGQRDTRSEGDSGGEKWKERVRDDNRRELKHLHSKSEGDTEGNASW
SIO_010081: LOC111958985
subclass of: SO_0000673
so part of: LOC111958985
location: 437091..>438123
location: region:437091-438123:1
so has part: feature:437091-438123:1:exon

XP_023836141.1
type: Protein
SIO_000068: ncbiprotein

position:437091:1
position: 437091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437091-438123:1:exon

LOC111958591
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 438297..458945
location: region:438297-458945:1
so has part: feature:438297-458945:1:exon
subclass of: SO_0000010

111958591
type: Gene
SIO_000068: ncbigene

position:438297:1
position: 438297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458945:1
position: 458945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438297-458945:1:exon

LOC111958591
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958591
product: trichohyalin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024134871.1
SIO_010081: LOC111958591
subclass of: SO_0000673
so part of: LOC111958591
location: join(438297..441384,445766..445814,446121..446170,454702..455053,456302..456431,456581..456655,456774..456863,457011..457153,457314..457457,457584..457654,457768..457872,458063..458945)
location: region:438297-458945:1
so has part: feature:438297-441384:1:exon
so has part: feature:445766-445814:1:exon
so has part: feature:446121-446170:1:exon
so has part: feature:454702-455053:1:exon
so has part: feature:456302-456431:1:exon
so has part: feature:456581-456655:1:exon
so has part: feature:456774-456863:1:exon
so has part: feature:457011-457153:1:exon
so has part: feature:457314-457457:1:exon
so has part: feature:457584-457654:1:exon
so has part: feature:457768-457872:1:exon
so has part: feature:458063-458945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438297-441384:1:exon

position:441384:1
position: 441384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445766-445814:1:exon

position:445766:1
position: 445766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445814:1
position: 445814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:446121-446170:1:exon

position:446121:1
position: 446121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446170:1
position: 446170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:454702-455053:1:exon

position:454702:1
position: 454702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455053:1
position: 455053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:456302-456431:1:exon

position:456302:1
position: 456302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456431:1
position: 456431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:456581-456655:1:exon

position:456581:1
position: 456581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456655:1
position: 456655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:456774-456863:1:exon

position:456774:1
position: 456774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456863:1
position: 456863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:457011-457153:1:exon

position:457011:1
position: 457011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457153:1
position: 457153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:457314-457457:1:exon

position:457314:1
position: 457314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457457:1
position: 457457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:457584-457654:1:exon

position:457584:1
position: 457584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457654:1
position: 457654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:457768-457872:1:exon

position:457768:1
position: 457768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457872:1
position: 457872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:458063-458945:1:exon

position:458063:1
position: 458063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958591
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trichohyalin
translation: MERYRERDRRKVREVERERDEVREGGRREDGPRERRDPEKDGEKTQPNVTGERGKRMDGERFRERERYSKGEDEERRRREKKDRETDPKREGGADGASRLPSETAPRVPPRVQSSGEWRSDIERERKWRKGRKSHEEKESEGDVDRGQRECSERERPDRVRGREGEEETIPKRPEQRRMWLLPQKVRYNKDSSLEDEVRERERDRHTNRWRDRSEEEDRSMEQRTGREKERKTEGEGQEDRSVEQRTGREKERKTEGEGQVDRSVEQRKSIDEERETEREGGREMYLERGLNVDEDDETEAWRSYSRGEEHQTYSDGEREERWQRDRETERENVTDNTEGDREEEGGSDRYALFESDGGSEREWEGGRDRIPSSEDGFITVSSGGEEEFEDCKEFLEVGVANHVTRQPVSFQGSEGQMERGGGRRHERERERTEEQLEQKDDAVEGEVNDGKVKKQPTYVFCVIGQTLPRSKPNQTAVLGDMESERTNQNPGYGHRDSGDITHLPHENPSRDGDQGAEDERKIVRDETHVPKEERTDTEESSIVDVSHTTLERESGERLKVVEENPYAEIEQRRNSETEKLLKEWRERHKEYRETRERDPTDSRRTEPEIGPSSHPSGEYHHHEIPVVDQATSDQNNPGVMSPEEAVAIQICIRGAWSTEEETKRHSQASHMKWAKNVLSEILGSSEEHARGNPQPESQGGQEVSQTARGTERVEEELEEEKDETPEGGGASTVYATVQKRTKRGRKSVEARLAERXAEPGKVEDERGTGEKLTDMHAEAFTAMLGDGKPIDMHXALTLHNTHGDTPTDRQGEEVEGNNVCADRQTDSHIHIQVEMVTEVEGEIEKGVEVGDEVHILDAEKEVNAQKEEDLFLSVSNTLYKPTSCPSLIYNPDSEQPITPIEEKTEEEGEKERTVGEGEENSVVEGKQERRIXDGTEDRGKVGXATEERKVEREEEKRVGGEDERMREGKEESKKTGGGGVKSTCSFQDLGTDVRFWRRGFHKTTERRNEEEEGREDARDRRTRIFQASDDEEEEVSFNWGDVDLRNVTDTIRMARRNSKFYNSQLYQEVTDETAQNREISVSLALTPLSNLRGLPVHLSPYPPPWPPRSLRPAEALTPSPPSHPPPLSVSTLLYSSATSAKFLPRYPQPPQATPSQGLLSPPSPSPSPSPPACGRRSLRDENHGFRRVVEKLERGPVCQRLPLRSFLILPFQRITRIKLLVQNIVKRTAQGTEEEVQAIKAMKLLERLIQESNDSITQMKSIESLVSLSARVDFECRTLPLVSQSRRLVREGPVTEMMDFSLKETERSVYLHLFNDYLLLSLNKEGGRFTVIDHAPVSELRAENCRVKLHSLEKNLFRLHLNKKALLLSTDTQGDKLRWISAVSRPHPVIDYSTAQDFTQMQCIRAFVAHQPDELSLEKAEVILVHQQSSDGWVEGTRLSDRHRGWTPESHLETIASLRVRQRNLLDAIKITTATAAV
SIO_010081: LOC111958591
subclass of: SO_0000673
so part of: LOC111958591
location: join(438297..441384,445766..445814,446121..446170,454702..455053,456302..456431,456581..456655,456774..456863,457011..457153,457314..457457,457584..457654,457768..457872,458063..458205)
location: region:438297-458205:1
so has part: feature:438297-441384:1:exon
so has part: feature:445766-445814:1:exon
so has part: feature:446121-446170:1:exon
so has part: feature:454702-455053:1:exon
so has part: feature:456302-456431:1:exon
so has part: feature:456581-456655:1:exon
so has part: feature:456774-456863:1:exon
so has part: feature:457011-457153:1:exon
so has part: feature:457314-457457:1:exon
so has part: feature:457584-457654:1:exon
so has part: feature:457768-457872:1:exon
so has part: feature:458063-458205:1:exon

XP_023990639.1
type: Protein
SIO_000068: ncbiprotein

position:458205:1
position: 458205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438297-441384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445766-445814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446121-446170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454702-455053:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456302-456431:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456581-456655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456774-456863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457011-457153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457314-457457:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457584-457654:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457768-457872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458063-458205:1:exon

LOC111958903
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 462200..465231
location: region:462200-465231:1
so has part: feature:462200-465231:1:exon
subclass of: SO_0000010

111958903
type: Gene
SIO_000068: ncbigene

position:462200:1
position: 462200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465231:1
position: 465231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462200-465231:1:exon

LOC111958903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958903
product: gamma-aminobutyric acid receptor-associated protein-like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023980234.2
SIO_010081: LOC111958903
subclass of: SO_0000673
so part of: LOC111958903
location: join(462200..462574,463601..463690,464031..464109,464333..464451,464717..465231)
location: region:462200-465231:1
so has part: feature:462200-462574:1:exon
so has part: feature:463601-463690:1:exon
so has part: feature:464031-464109:1:exon
so has part: feature:464333-464451:1:exon
so has part: feature:464717-465231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462200-462574:1:exon

position:462574:1
position: 462574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463601-463690:1:exon

position:463601:1
position: 463601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463690:1
position: 463690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464031-464109:1:exon

position:464031:1
position: 464031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464109:1
position: 464109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464333-464451:1:exon

position:464333:1
position: 464333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464451:1
position: 464451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:464717-465231:1:exon

position:464717:1
position: 464717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein-like 1
translation: MDSQYQRSVPLEVRRAEGERVRAKHPDKIPIIVERAARSRAPDLDKKKYLVPSDLTVGQLCFLIRQRVSMRPEEALFFFVNNSLPPSSSPLSAVYEEHHEEDLFLYMTYSNESVYGA
SIO_010081: LOC111958903
subclass of: SO_0000673
so part of: LOC111958903
location: join(463601..463690,464031..464109,464333..464451,464717..464782)
location: region:463601-464782:1
so has part: feature:463601-463690:1:exon
so has part: feature:464031-464109:1:exon
so has part: feature:464333-464451:1:exon
so has part: feature:464717-464782:1:exon

XP_023836002.1
type: Protein
SIO_000068: ncbiprotein

position:464782:1
position: 464782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463601-463690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464031-464109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464333-464451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464717-464782:1:exon

LOC111958904
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 467141..474595
location: region:467141-474595:1
so has part: feature:467141-474595:1:exon

111958904
type: Gene
SIO_000068: ncbigene

position:467141:1
position: 467141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474595:1
position: 474595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467141-474595:1:exon

LOC111958904
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958904
subclass of: SO_0000673
so part of: LOC111958904
location: 467141..467327
location: region:467141-467327:1
so has part: feature:467141-467327:1:exon

position:467327:1
position: 467327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467141-467327:1:exon

LOC111958904
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958904
subclass of: SO_0000673
so part of: LOC111958904
location: 472255..472359
location: region:472255-472359:1
so has part: feature:472255-472359:1:exon

position:472255:1
position: 472255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472359:1
position: 472359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472255-472359:1:exon

LOC111958904
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958904
subclass of: SO_0000673
so part of: LOC111958904
location: 472758..473002
location: region:472758-473002:1
so has part: feature:472758-473002:1:exon

position:472758:1
position: 472758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473002:1
position: 473002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472758-473002:1:exon

LOC111958904
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958904
subclass of: SO_0000673
so part of: LOC111958904
location: 473211..473362
location: region:473211-473362:1
so has part: feature:473211-473362:1:exon

position:473211:1
position: 473211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473362:1
position: 473362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473211-473362:1:exon

LOC111958904
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958904
subclass of: SO_0000673
so part of: LOC111958904
location: 473542..473639
location: region:473542-473639:1
so has part: feature:473542-473639:1:exon

position:473542:1
position: 473542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473639:1
position: 473639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473542-473639:1:exon

LOC111958904
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958904
subclass of: SO_0000673
so part of: LOC111958904
location: 473769..474595
location: region:473769-474595:1
so has part: feature:473769-474595:1:exon

position:473769:1
position: 473769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473769-474595:1:exon

LOC111959104
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(478736..486250)
location: region:478736-486250:-1
so has part: feature:478736-486250:-1:exon

111959104
type: Gene
SIO_000068: ncbigene

position:478736:-1
position: 478736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486250:-1
position: 486250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478736-486250:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(478736..478992)
location: region:478736-478992:-1
so has part: feature:478736-478992:-1:exon

position:478992:-1
position: 478992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478736-478992:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(479129..479233)
location: region:479129-479233:-1
so has part: feature:479129-479233:-1:exon

position:479129:-1
position: 479129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479233:-1
position: 479233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479129-479233:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(481034..481309)
location: region:481034-481309:-1
so has part: feature:481034-481309:-1:exon

position:481034:-1
position: 481034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481309:-1
position: 481309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481034-481309:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(481509..481573)
location: region:481509-481573:-1
so has part: feature:481509-481573:-1:exon

position:481509:-1
position: 481509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481573:-1
position: 481573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481509-481573:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(481687..481859)
location: region:481687-481859:-1
so has part: feature:481687-481859:-1:exon

position:481687:-1
position: 481687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481859:-1
position: 481859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481687-481859:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(481964..482031)
location: region:481964-482031:-1
so has part: feature:481964-482031:-1:exon

position:481964:-1
position: 481964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482031:-1
position: 482031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481964-482031:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(482135..482222)
location: region:482135-482222:-1
so has part: feature:482135-482222:-1:exon

position:482135:-1
position: 482135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482222:-1
position: 482222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482135-482222:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(482338..482473)
location: region:482338-482473:-1
so has part: feature:482338-482473:-1:exon

position:482338:-1
position: 482338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482473:-1
position: 482473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482338-482473:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(482573..482652)
location: region:482573-482652:-1
so has part: feature:482573-482652:-1:exon

position:482573:-1
position: 482573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482652:-1
position: 482652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482573-482652:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(482733..482885)
location: region:482733-482885:-1
so has part: feature:482733-482885:-1:exon

position:482733:-1
position: 482733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482885:-1
position: 482885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482733-482885:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(483105..483280)
location: region:483105-483280:-1
so has part: feature:483105-483280:-1:exon

position:483105:-1
position: 483105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483280:-1
position: 483280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483105-483280:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(483375..483473)
location: region:483375-483473:-1
so has part: feature:483375-483473:-1:exon

position:483375:-1
position: 483375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483473:-1
position: 483473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483375-483473:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(483559..483699)
location: region:483559-483699:-1
so has part: feature:483559-483699:-1:exon

position:483559:-1
position: 483559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483699:-1
position: 483699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483559-483699:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(483811..484031)
location: region:483811-484031:-1
so has part: feature:483811-484031:-1:exon

position:483811:-1
position: 483811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484031:-1
position: 484031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483811-484031:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(484471..484631)
location: region:484471-484631:-1
so has part: feature:484471-484631:-1:exon

position:484471:-1
position: 484471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484631:-1
position: 484631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484471-484631:-1:exon

LOC111959104
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959104
subclass of: SO_0000673
so part of: LOC111959104
location: complement(486167..486250)
location: region:486167-486250:-1
so has part: feature:486167-486250:-1:exon

position:486167:-1
position: 486167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486167-486250:-1:exon

LOC111959103
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(507286..515165)
location: region:507286-515165:-1
so has part: feature:507286-515165:-1:exon

111959103
type: Gene
SIO_000068: ncbigene

position:507286:-1
position: 507286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515165:-1
position: 515165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507286-515165:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(507286..507805)
location: region:507286-507805:-1
so has part: feature:507286-507805:-1:exon

position:507805:-1
position: 507805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507286-507805:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(507942..508052)
location: region:507942-508052:-1
so has part: feature:507942-508052:-1:exon

position:507942:-1
position: 507942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508052:-1
position: 508052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507942-508052:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(509888..510154)
location: region:509888-510154:-1
so has part: feature:509888-510154:-1:exon

position:509888:-1
position: 509888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510154:-1
position: 510154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509888-510154:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(510368..510440)
location: region:510368-510440:-1
so has part: feature:510368-510440:-1:exon

position:510368:-1
position: 510368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510440:-1
position: 510440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510368-510440:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(510559..510724)
location: region:510559-510724:-1
so has part: feature:510559-510724:-1:exon

position:510559:-1
position: 510559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510724:-1
position: 510724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510559-510724:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(510840..510916)
location: region:510840-510916:-1
so has part: feature:510840-510916:-1:exon

position:510840:-1
position: 510840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510916:-1
position: 510916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510840-510916:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(511024..511110)
location: region:511024-511110:-1
so has part: feature:511024-511110:-1:exon

position:511024:-1
position: 511024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511110:-1
position: 511110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511024-511110:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(511227..511362)
location: region:511227-511362:-1
so has part: feature:511227-511362:-1:exon

position:511227:-1
position: 511227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511362:-1
position: 511362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511227-511362:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(511462..511541)
location: region:511462-511541:-1
so has part: feature:511462-511541:-1:exon

position:511462:-1
position: 511462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511541:-1
position: 511541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511462-511541:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(511622..511774)
location: region:511622-511774:-1
so has part: feature:511622-511774:-1:exon

position:511622:-1
position: 511622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511774:-1
position: 511774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511622-511774:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(511994..512169)
location: region:511994-512169:-1
so has part: feature:511994-512169:-1:exon

position:511994:-1
position: 511994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512169:-1
position: 512169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511994-512169:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(512264..512362)
location: region:512264-512362:-1
so has part: feature:512264-512362:-1:exon

position:512264:-1
position: 512264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512362:-1
position: 512362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512264-512362:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(512448..512588)
location: region:512448-512588:-1
so has part: feature:512448-512588:-1:exon

position:512448:-1
position: 512448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512588:-1
position: 512588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512448-512588:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(512700..512920)
location: region:512700-512920:-1
so has part: feature:512700-512920:-1:exon

position:512700:-1
position: 512700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512920:-1
position: 512920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512700-512920:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(513436..513596)
location: region:513436-513596:-1
so has part: feature:513436-513596:-1:exon

position:513436:-1
position: 513436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513596:-1
position: 513596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513436-513596:-1:exon

LOC111959103
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111959103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111959103
subclass of: SO_0000673
so part of: LOC111959103
location: complement(515129..515165)
location: region:515129-515165:-1
so has part: feature:515129-515165:-1:exon

position:515129:-1
position: 515129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515129-515165:-1:exon

LOC111958592
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(529185..552785)
location: region:529185-552785:-1
so has part: feature:529185-552785:-1:exon
subclass of: SO_0000010

111958592
type: Gene
SIO_000068: ncbigene

position:529185:-1
position: 529185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552785:-1
position: 552785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529185-552785:-1:exon

LOC111958592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958592
product: ephrin type-B receptor 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023979853.1
SIO_010081: LOC111958592
subclass of: SO_0000673
so part of: LOC111958592
location: complement(join(529185..530626,530735..530890,531069..531253,531578..531727,531900..532118,532485..532732,532891..533007,533626..533681,533786..533900,534001..534163,534267..534391,543251..543332,543587..543858,544624..544833,552637..552720,552779..552785))
location: region:529185-552785:-1
so has part: feature:552779-552785:-1:exon
so has part: feature:552637-552720:-1:exon
so has part: feature:544624-544833:-1:exon
so has part: feature:543587-543858:-1:exon
so has part: feature:543251-543332:-1:exon
so has part: feature:534267-534391:-1:exon
so has part: feature:534001-534163:-1:exon
so has part: feature:533786-533900:-1:exon
so has part: feature:533626-533681:-1:exon
so has part: feature:532891-533007:-1:exon
so has part: feature:532485-532732:-1:exon
so has part: feature:531900-532118:-1:exon
so has part: feature:531578-531727:-1:exon
so has part: feature:531069-531253:-1:exon
so has part: feature:530735-530890:-1:exon
so has part: feature:529185-530626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552779-552785:-1:exon

position:552779:-1
position: 552779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552637-552720:-1:exon

position:552637:-1
position: 552637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552720:-1
position: 552720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544624-544833:-1:exon

position:544624:-1
position: 544624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544833:-1
position: 544833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:543587-543858:-1:exon

position:543587:-1
position: 543587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543858:-1
position: 543858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:543251-543332:-1:exon

position:543251:-1
position: 543251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543332:-1
position: 543332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:534267-534391:-1:exon

position:534267:-1
position: 534267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534391:-1
position: 534391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:534001-534163:-1:exon

position:534001:-1
position: 534001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534163:-1
position: 534163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:533786-533900:-1:exon

position:533786:-1
position: 533786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533900:-1
position: 533900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:533626-533681:-1:exon

position:533626:-1
position: 533626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533681:-1
position: 533681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:532891-533007:-1:exon

position:532891:-1
position: 532891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533007:-1
position: 533007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:532485-532732:-1:exon

position:532485:-1
position: 532485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532732:-1
position: 532732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:531900-532118:-1:exon

position:531900:-1
position: 531900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532118:-1
position: 532118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:531578-531727:-1:exon

position:531578:-1
position: 531578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531727:-1
position: 531727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:531069-531253:-1:exon

position:531069:-1
position: 531069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531253:-1
position: 531253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:530735-530890:-1:exon

position:530735:-1
position: 530735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530890:-1
position: 530890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:529185-530626:-1:exon

position:530626:-1
position: 530626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-B receptor 5
translation: MSTEPVRRDRVCVVSQRLLQSTRDVNSSLHSSPSAPTSVSWEYESGDGGVSLRWRPPLDMGGRSEVWYGVVCRICPSATFTAPGACSWCGEAVTFTPSQTGSPSAPTSVSWEYESGDGGVSLRWRPPVDMGGRSEVWYGVVCRICPSATFTAPGACSWCGEAVTFTPSQTGIKQTKVTLNNLLTRVTYLIQVQAVNDVSALSPFPPQFXSINFTTSQSVPSLVPSLHQLSRAPDSITLSWPQPDRPNGDILEYQLRYYDKGSDEDSAVSVFSETNTVTVNYLAPGSIYAFQIRARNERGYGPYSHTIYFTTLALEGSSKQIQNRLPLLVGSVMGGAAFLLVVVAIVVVFVFRSKRRESPYSDRLQRYISHKGGVKYYVDPSTYEDPSEAVKEFAREIDPSHLKIEEVIGAAQFGEVSRGRYRPLGRREVLVAVKTLRWGVTDREKAVFMTEAGVLGQFDHPNVLKLEGVVTQSPPERIITEFMENGPLDAFLRENEDQFSVLQLVGMVRGVGAGMRYLSERNFVHRDLAARNVLVNSNLVCKVSDFGLSRLMRGLDQNMPTYTASLGSKIPVRWTAPEAFQHRKFSSASDVWSFGVLMWEVMSYGERPYWDMSNQEVMKAVADQYRLPAPNNCPPALHSLMLQCWQAERGDRLGFDSLLSSLDRLIRHPASLKAEHPRSTQPLLSPTPTDLSSVATVSEWLTALRMDRYKDQFERAHLDTLDRVSRVTMEDVQNLGVDLLGHQRKITNAAQQLRTHLTQGQVEV
SIO_010081: LOC111958592
subclass of: SO_0000673
so part of: LOC111958592
location: complement(join(530521..530626,530735..530890,531069..531253,531578..531727,531900..532118,532485..532732,532891..533007,533626..533681,533786..533900,534001..534163,534267..534391,543251..543332,543587..543858,544624..544833,552637..552720,552779..552785))
location: region:530521-552785:-1
so has part: feature:552779-552785:-1:exon
so has part: feature:552637-552720:-1:exon
so has part: feature:544624-544833:-1:exon
so has part: feature:543587-543858:-1:exon
so has part: feature:543251-543332:-1:exon
so has part: feature:534267-534391:-1:exon
so has part: feature:534001-534163:-1:exon
so has part: feature:533786-533900:-1:exon
so has part: feature:533626-533681:-1:exon
so has part: feature:532891-533007:-1:exon
so has part: feature:532485-532732:-1:exon
so has part: feature:531900-532118:-1:exon
so has part: feature:531578-531727:-1:exon
so has part: feature:531069-531253:-1:exon
so has part: feature:530735-530890:-1:exon
so has part: feature:530521-530626:-1:exon

XP_023835621.1
type: Protein
SIO_000068: ncbiprotein

position:530521:-1
position: 530521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552779-552785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552637-552720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544624-544833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543587-543858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543251-543332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:534267-534391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534001-534163:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:533786-533900:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533626-533681:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:532891-533007:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:532485-532732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531900-532118:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531578-531727:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:531069-531253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:530735-530890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:530521-530626:-1:exon

LOC111959062
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(609742..622091)
location: region:609742-622091:-1
so has part: feature:609742-622091:-1:exon
subclass of: SO_0000010

111959062
type: Gene
SIO_000068: ncbigene

position:609742:-1
position: 609742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622091:-1
position: 622091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609742-622091:-1:exon

LOC111959062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959062
product: dendritic arbor reduction protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_023980483.2
SIO_010081: LOC111959062
subclass of: SO_0000673
so part of: LOC111959062
location: complement(join(609742..613427,615690..615959,616371..616687,621945..622091))
location: region:609742-622091:-1
so has part: feature:621945-622091:-1:exon
so has part: feature:616371-616687:-1:exon
so has part: feature:615690-615959:-1:exon
so has part: feature:609742-613427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621945-622091:-1:exon

position:621945:-1
position: 621945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:616371-616687:-1:exon

position:616371:-1
position: 616371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616687:-1
position: 616687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:615690-615959:-1:exon

position:615690:-1
position: 615690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615959:-1
position: 615959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:609742-613427:-1:exon

position:613427:-1
position: 613427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111959062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dendritic arbor reduction protein 1-like
translation: MAWTSMDGESLRSGSNQGSVAHLSEVNQESITSRDQILHHSSADMWPNTYVAQGLYCLSSSDAWEPISNEPSGVASPAAGSYVMQQGGTSCDGYDGNALLQQQQQQQQFNLQQQSQLQQLQQLQQIQHYQQQQLLYQQQQSLEQRLHSANHSLQATPNSTIHSLAPATHAPLVDLWGAGQTESYHADIGGYNIGVAAVVEAALNVPSGEEGAGTDHSPLLEQQEEEDELKDEEVTLCMEPESATLTQREEAITSGGSSPGQRSPGRSSPGQPPAQQITERKASDVSCGGIQMLEEKEEKQVSTVAAMATN
SIO_010081: LOC111959062
subclass of: SO_0000673
so part of: LOC111959062
location: complement(join(613185..613427,615690..615959,616371..616687,621945..622047))
location: region:613185-622047:-1
so has part: feature:621945-622047:-1:exon
so has part: feature:616371-616687:-1:exon
so has part: feature:615690-615959:-1:exon
so has part: feature:613185-613427:-1:exon

XP_023836251.1
type: Protein
SIO_000068: ncbiprotein

position:613185:-1
position: 613185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622047:-1
position: 622047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621945-622047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616371-616687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615690-615959:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613185-613427:-1:exon

LOC111958594
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <622434..624188
location: region:622434-624188:1
so has part: feature:622434-624188:1:exon
subclass of: SO_0000010

111958594
type: Gene
SIO_000068: ncbigene

position:622434:1
position: 622434
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:624188:1
position: 624188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622434-624188:1:exon

LOC111958594
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958594
product: probable 28S rRNA (cytosine-C(5))-methyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_024134872.1
SIO_010081: LOC111958594
subclass of: SO_0000673
so part of: LOC111958594
location: join(<622434..622589,622778..622875,622981..623117,623229..624188)
location: region:622434-624188:1
so has part: feature:622434-622589:1:exon
so has part: feature:622778-622875:1:exon
so has part: feature:622981-623117:1:exon
so has part: feature:623229-624188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622434-622589:1:exon

position:622589:1
position: 622589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622778-622875:1:exon

position:622778:1
position: 622778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622875:1
position: 622875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622981-623117:1:exon

position:622981:1
position: 622981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623117:1
position: 623117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:623229-624188:1:exon

position:623229:1
position: 623229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958594
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable 28S rRNA (cytosine-C(5))-methyltransferase
translation: HVFLILRPVSQDESDIQRLAHLQKELILAAIDSVNAESPSGGYVVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDFGKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEETEPSEAVEVTADSSDEDGPPKAGSKNKSKKQKPVPGKPAVSQKATANGKLAKSIGKKTTNPSTLKKNEKPTGPKKAKIAKMDGGTVKVDGELKKSNTVKTEGETTKESKEGSRFEKKGDKQRKSPMQSKKRMGKNKFNKLKKLLKKEEVGQ
SIO_010081: LOC111958594
subclass of: SO_0000673
so part of: LOC111958594
location: join(<622434..622589,622778..622875,622981..623117,623229..623698)
location: region:622434-623698:1
so has part: feature:622434-622589:1:exon
so has part: feature:622778-622875:1:exon
so has part: feature:622981-623117:1:exon
so has part: feature:623229-623698:1:exon

XP_023990640.1
type: Protein
SIO_000068: ncbiprotein

position:623698:1
position: 623698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622434-622589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622778-622875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622981-623117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623229-623698:1:exon

LOC111958807
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 624367..628200
location: region:624367-628200:1
so has part: feature:624367-628200:1:exon
subclass of: SO_0000010

111958807
type: Gene
SIO_000068: ncbigene

position:624367:1
position: 624367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628200:1
position: 628200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624367-628200:1:exon

LOC111958807
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958807
product: inhibitor of growth protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023980080.1
SIO_010081: LOC111958807
subclass of: SO_0000673
so part of: LOC111958807
location: join(624367..624469,624774..624845,625352..625518,625614..625728,626582..626696,626811..626955,627078..627139,627852..628200)
location: region:624367-628200:1
so has part: feature:624367-624469:1:exon
so has part: feature:624774-624845:1:exon
so has part: feature:625352-625518:1:exon
so has part: feature:625614-625728:1:exon
so has part: feature:626582-626696:1:exon
so has part: feature:626811-626955:1:exon
so has part: feature:627078-627139:1:exon
so has part: feature:627852-628200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624367-624469:1:exon

position:624469:1
position: 624469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624774-624845:1:exon

position:624774:1
position: 624774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624845:1
position: 624845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:625352-625518:1:exon

position:625352:1
position: 625352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625518:1
position: 625518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:625614-625728:1:exon

position:625614:1
position: 625614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625728:1
position: 625728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:626582-626696:1:exon

position:626582:1
position: 626582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626696:1
position: 626696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:626811-626955:1:exon

position:626811:1
position: 626811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626955:1
position: 626955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:627078-627139:1:exon

position:627078:1
position: 627078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627139:1
position: 627139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:627852-628200:1:exon

position:627852:1
position: 627852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958807
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of growth protein 4
translation: MAAGMYLEHYLDSIENLPFELQRNFNLMRDLDQRTEDLKGQIDSLAKDYTSNARTLSSEQKLTILRQIQQSYSKSKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESTDYDSTSSKGKKSESRGLKEKKVAKTRSKVKSSDEDGSPKSAQKKVKLLQPGEFTAPAANFGNVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNTDCSIEWFHFACVGLTTKPRGKWYCPRCSQDRKRK
SIO_010081: LOC111958807
subclass of: SO_0000673
so part of: LOC111958807
location: join(624433..624469,624774..624845,625352..625518,625614..625728,626582..626696,626811..626955,627078..627139,627852..627891)
location: region:624433-627891:1
so has part: feature:624433-624469:1:exon
so has part: feature:624774-624845:1:exon
so has part: feature:625352-625518:1:exon
so has part: feature:625614-625728:1:exon
so has part: feature:626582-626696:1:exon
so has part: feature:626811-626955:1:exon
so has part: feature:627078-627139:1:exon
so has part: feature:627852-627891:1:exon

XP_023835848.1
type: Protein
SIO_000068: ncbiprotein

position:624433:1
position: 624433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627891:1
position: 627891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624433-624469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624774-624845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625352-625518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625614-625728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626582-626696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:626811-626955:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:627078-627139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:627852-627891:1:exon

LOC111958806
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 628780..>635557
location: region:628780-635557:1
so has part: feature:628780-635557:1:exon
subclass of: SO_0000010

111958806
type: Gene
SIO_000068: ncbigene

position:628780:1
position: 628780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635557:1
position: 635557
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628780-635557:1:exon

LOC111958806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958806
product: condensin complex subunit 1
inference: similar to RNA sequence (same species):INSD:GGAP01015577.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 2827 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_023980079.1
SIO_010081: LOC111958806
subclass of: SO_0000673
so part of: LOC111958806
location: join(628780..628923,629275..629394,629499..629574,629684..629742,629866..630041,630611..630756,630892..631019,631178..631301,631476..631623,631997..632194,632897..633031,633111..633198,633836..634028,634330..634448,635066..635281,635423..>635557)
location: region:628780-635557:1
so has part: feature:628780-628923:1:exon
so has part: feature:629275-629394:1:exon
so has part: feature:629499-629574:1:exon
so has part: feature:629684-629742:1:exon
so has part: feature:629866-630041:1:exon
so has part: feature:630611-630756:1:exon
so has part: feature:630892-631019:1:exon
so has part: feature:631178-631301:1:exon
so has part: feature:631476-631623:1:exon
so has part: feature:631997-632194:1:exon
so has part: feature:632897-633031:1:exon
so has part: feature:633111-633198:1:exon
so has part: feature:633836-634028:1:exon
so has part: feature:634330-634448:1:exon
so has part: feature:635066-635281:1:exon
so has part: feature:635423-635557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628780-628923:1:exon

position:628923:1
position: 628923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:629275-629394:1:exon

position:629275:1
position: 629275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629394:1
position: 629394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:629499-629574:1:exon

position:629499:1
position: 629499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629574:1
position: 629574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:629684-629742:1:exon

position:629684:1
position: 629684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629742:1
position: 629742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:629866-630041:1:exon

position:629866:1
position: 629866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630041:1
position: 630041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:630611-630756:1:exon

position:630611:1
position: 630611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630756:1
position: 630756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:630892-631019:1:exon

position:630892:1
position: 630892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631019:1
position: 631019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:631178-631301:1:exon

position:631178:1
position: 631178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631301:1
position: 631301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:631476-631623:1:exon

position:631476:1
position: 631476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631623:1
position: 631623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:631997-632194:1:exon

position:631997:1
position: 631997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632194:1
position: 632194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:632897-633031:1:exon

position:632897:1
position: 632897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633031:1
position: 633031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:633111-633198:1:exon

position:633111:1
position: 633111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633198:1
position: 633198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:633836-634028:1:exon

position:633836:1
position: 633836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634028:1
position: 634028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:634330-634448:1:exon

position:634330:1
position: 634330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634448:1
position: 634448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:635066-635281:1:exon

position:635066:1
position: 635066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635281:1
position: 635281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:635423-635557:1:exon

position:635423:1
position: 635423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958806
inference: similar to RNA sequence (same species):INSD:GGAP01015577.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 2171 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin complex subunit 1
translation: MSWDFFVPVCVGDLVKTGGINQYVVQDVVSPKQLPSHLNSFKAALRSQGPLCILEHFDTGYTVLQHCHKVDMSVKEDTLELLIQVVSGLSVSLPSLLLNASLSAPDRKEQLNAVKMSVFLLCKLTEILESDSYRQSIVTAPSKGSKKGKVAGEGLLQWDSERETVLQALTQLLQLDIRSLWSLSLVEEEFISCVTCCCYKLLENPTISHVKNKPTRDAIIHLLGVQVKKYNHLLGASVKVIQLLQHFDQLSSVCAQAVSVWSTEYGVKAIVGEVMREIGQKSSEELAREGSGVKAFSSFLSELGTLVPDTMIPNISVLLTHLEGESPSLRVAVCEVLGEVLVRVLSGDALDESGRADRDRFMDTLQEHLHDTHSYVRARVLQVYTRIVNSKALPLNRYSEVMGLAVGRLMDKSINVVKSAIQLLAAFIAHNPYSCKLSSADLKKPLEKETDKLRELRERLQENAPVAVIKASELWAAMEPELLFTVRAELEPTSEGEGEQQEREEDEAGEEDDRATAVQIAQFLRVNKYRNAVRLCVRAHSLFPESEMFSSLTTLTAETLLDTLALLFKGPDQDTSEIREDLPSTPQKEGAGDGGKEGVEESELKKQEMLLQYLRDTESFALQVERAIAVINTMLYWKTTSVVQEAVQFCVTVCEFSVANSLTGVRKMLPLVWSTDAAIKDAVVQAYRRLYLNPQGDNTRAKAQTLVDSLSELMVDASLGTIQCLEEIVQEFFGGGSSLQSTVVQVLWERFTGKRETSSLHRRAAVLLLGMAARAEREVVLSNLDTLCSVALGEKLTEDFLLARDSVITICNITDHVRQCKGAPFRLPQDNQLFTCLTQAIAEGVVMADPHWQSFMEQAVRLLYFLSESPDQLCSRLLQRCSRLLLDQIAEGGEMLANKDVSQLPGASQDPEEQGEQVPAVSCVSLAQLLSLCGCVAFWQVSHLERSVSSELRRRRGETEEREEKAKVPSRKAKQAANDSSVEEELGLMGASAEDTEAELIRKICETELLAEENLLCSFLPLLVRVCSSPGRYCHPQLTTAACLALSQYMMISPSVCEEHIRLLFTVLERSSLPVVRANAIIGLGDLTVRFPNILEPWTQNLYTRLSDENPAVRQTAVTVLTQLVLKDVLKVKGQVSEVAVLLIDPQTHIASLALNFFNELASKDNAIYNLLPDIISRLSDPERAMNEEDFHTIMKQLFSYITKERQTESLVEKLCQRFRTAKTERQWCDLAVSLSLLSMCERGLKRLQECWECYSDKLTETGVYQPLLSITAKLRRGAKPQLKVQVEEFEKRLTAVHTRGLENVESSEMEKNQPEGAAPSQNTTHTPLPNKGRGGRPKRGQAKPSVASRHDDSFVTPKPTRKSSKKAVITFSSDEEEEEEEDAVMAESETPKVTTPIARTSRRARLRH
SIO_010081: LOC111958806
subclass of: SO_0000673
so part of: LOC111958806
location: join(629277..629394,629499..629574,629684..629742,629866..630041,630611..630756,630892..631019,631178..631301,631476..631623,631997..632194,632897..633031,633111..633198,633836..634028,634330..634448,635066..635281,635423..>635557)
location: region:629277-635557:1
so has part: feature:629277-629394:1:exon
so has part: feature:629499-629574:1:exon
so has part: feature:629684-629742:1:exon
so has part: feature:629866-630041:1:exon
so has part: feature:630611-630756:1:exon
so has part: feature:630892-631019:1:exon
so has part: feature:631178-631301:1:exon
so has part: feature:631476-631623:1:exon
so has part: feature:631997-632194:1:exon
so has part: feature:632897-633031:1:exon
so has part: feature:633111-633198:1:exon
so has part: feature:633836-634028:1:exon
so has part: feature:634330-634448:1:exon
so has part: feature:635066-635281:1:exon
so has part: feature:635423-635557:1:exon

XP_023835847.1
type: Protein
SIO_000068: ncbiprotein

position:629277:1
position: 629277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629277-629394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629499-629574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629684-629742:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629866-630041:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:630611-630756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630892-631019:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631178-631301:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631476-631623:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:631997-632194:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632897-633031:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:633111-633198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633836-634028:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634330-634448:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:635066-635281:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:635423-635557:1:exon

LOC111959215
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959215
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 630119..630425
location: region:630119-630425:1
so has part: feature:630119-630425:1:exon
subclass of: SO_0000578

111959215
type: Gene
SIO_000068: ncbigene

position:630119:1
position: 630119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630425:1
position: 630425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630119-630425:1:exon

LOC111959215
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: snoRNA
gene: LOC111959215
product: small nucleolar RNA U85
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01296
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002876632.1
SIO_010081: LOC111959215
subclass of: SO_0000673
so part of: LOC111959215
location: 630119..630425
location: region:630119-630425:1
so has part: feature:630119-630425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630119-630425:1:exon

LOC111959216
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959216
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 632314..632620
location: region:632314-632620:1
so has part: feature:632314-632620:1:exon
subclass of: SO_0000578

111959216
type: Gene
SIO_000068: ncbigene

position:632314:1
position: 632314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632620:1
position: 632620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632314-632620:1:exon

LOC111959216
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: snoRNA
gene: LOC111959216
product: small nucleolar RNA U85
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01296
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002876633.1
SIO_010081: LOC111959216
subclass of: SO_0000673
so part of: LOC111959216
location: 632314..632620
location: region:632314-632620:1
so has part: feature:632314-632620:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:632314-632620:1:exon

LOC111959212
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959212
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 633240..633547
location: region:633240-633547:1
so has part: feature:633240-633547:1:exon
subclass of: SO_0000578

111959212
type: Gene
SIO_000068: ncbigene

position:633240:1
position: 633240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633547:1
position: 633547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633240-633547:1:exon

LOC111959212
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: snoRNA
gene: LOC111959212
product: small nucleolar RNA U85
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01296
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002876629.1
SIO_010081: LOC111959212
subclass of: SO_0000673
so part of: LOC111959212
location: 633240..633547
location: region:633240-633547:1
so has part: feature:633240-633547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633240-633547:1:exon

LOC111958595
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(645077..654615)
location: region:645077-654615:-1
so has part: feature:645077-654615:-1:exon

111958595
type: Gene
SIO_000068: ncbigene

position:645077:-1
position: 645077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654615:-1
position: 654615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645077-654615:-1:exon

LOC111958595
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958595
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958595
subclass of: SO_0000673
so part of: LOC111958595
location: complement(645077..645623)
location: region:645077-645623:-1
so has part: feature:645077-645623:-1:exon

position:645623:-1
position: 645623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645077-645623:-1:exon

LOC111958595
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958595
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958595
subclass of: SO_0000673
so part of: LOC111958595
location: complement(645713..645821)
location: region:645713-645821:-1
so has part: feature:645713-645821:-1:exon

position:645713:-1
position: 645713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645821:-1
position: 645821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645713-645821:-1:exon

LOC111958595
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958595
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958595
subclass of: SO_0000673
so part of: LOC111958595
location: complement(649856..650050)
location: region:649856-650050:-1
so has part: feature:649856-650050:-1:exon

position:649856:-1
position: 649856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650050:-1
position: 650050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649856-650050:-1:exon

LOC111958595
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958595
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958595
subclass of: SO_0000673
so part of: LOC111958595
location: complement(652998..653631)
location: region:652998-653631:-1
so has part: feature:652998-653631:-1:exon

position:652998:-1
position: 652998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653631:-1
position: 653631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652998-653631:-1:exon

LOC111958595
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958595
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958595
subclass of: SO_0000673
so part of: LOC111958595
location: complement(654504..654615)
location: region:654504-654615:-1
so has part: feature:654504-654615:-1:exon

position:654504:-1
position: 654504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654504-654615:-1:exon

LOC111959032
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(672868..675302)
location: region:672868-675302:-1
so has part: feature:672868-675302:-1:exon
subclass of: SO_0000010

111959032
type: Gene
SIO_000068: ncbigene

position:672868:-1
position: 672868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675302:-1
position: 675302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672868-675302:-1:exon

LOC111959032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959032
product: T-cell immunoreceptor with Ig and ITIM domains, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023980444.1
SIO_010081: LOC111959032
subclass of: SO_0000673
so part of: LOC111959032
location: complement(join(672868..673316,673460..673512,673608..673642,673754..673862,675021..675302))
location: region:672868-675302:-1
so has part: feature:675021-675302:-1:exon
so has part: feature:673754-673862:-1:exon
so has part: feature:673608-673642:-1:exon
so has part: feature:673460-673512:-1:exon
so has part: feature:672868-673316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675021-675302:-1:exon

position:675021:-1
position: 675021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673754-673862:-1:exon

position:673754:-1
position: 673754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673862:-1
position: 673862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:673608-673642:-1:exon

position:673608:-1
position: 673608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673642:-1
position: 673642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:673460-673512:-1:exon

position:673460:-1
position: 673460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673512:-1
position: 673512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:672868-673316:-1:exon

position:673316:-1
position: 673316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111959032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959032
product: T-cell immunoreceptor with Ig and ITIM domains, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_023980443.1
SIO_010081: LOC111959032
subclass of: SO_0000673
so part of: LOC111959032
location: complement(join(672868..673316,673460..673512,673608..673642,673754..673862,674321..674368,675021..675302))
location: region:672868-675302:-1
so has part: feature:675021-675302:-1:exon
so has part: feature:674321-674368:-1:exon
so has part: feature:673754-673862:-1:exon
so has part: feature:673608-673642:-1:exon
so has part: feature:673460-673512:-1:exon
so has part: feature:672868-673316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675021-675302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:674321-674368:-1:exon

position:674321:-1
position: 674321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674368:-1
position: 674368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:673754-673862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:673608-673642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673460-673512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672868-673316:-1:exon

LOC111959032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959032
product: T-cell immunoreceptor with Ig and ITIM domains, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023980442.1
SIO_010081: LOC111959032
subclass of: SO_0000673
so part of: LOC111959032
location: complement(join(672868..673316,673460..673512,673608..673642,673754..673862,674321..674662,675021..675302))
location: region:672868-675302:-1
so has part: feature:675021-675302:-1:exon
so has part: feature:674321-674662:-1:exon
so has part: feature:673754-673862:-1:exon
so has part: feature:673608-673642:-1:exon
so has part: feature:673460-673512:-1:exon
so has part: feature:672868-673316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675021-675302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:674321-674662:-1:exon

position:674662:-1
position: 674662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:673754-673862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:673608-673642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673460-673512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672868-673316:-1:exon

LOC111959032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111959032 isoform X3
translation: MEKCRLSAVLLLAHIGLSSDQTPPPSSGAVAGIVTAALLVTVVVTATAYLIIVRKRHKALFNPSVSIDASSLVVNADRTGTGREEDLVYSEIVRFNIDKSKAHDPSGEDQKDADVKPAEEVTYSAVAVGNQHPLREDTVYSQVVRKDWDIDDVWTV
SIO_010081: LOC111959032
subclass of: SO_0000673
so part of: LOC111959032
location: complement(join(673101..673316,673460..673512,673608..673642,673754..673862,675021..675078))
location: region:673101-675078:-1
so has part: feature:675021-675078:-1:exon
so has part: feature:673754-673862:-1:exon
so has part: feature:673608-673642:-1:exon
so has part: feature:673460-673512:-1:exon
so has part: feature:673101-673316:-1:exon

XP_023836212.1
type: Protein
SIO_000068: ncbiprotein

position:673101:-1
position: 673101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675078:-1
position: 675078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675021-675078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673754-673862:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673608-673642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:673460-673512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673101-673316:-1:exon

LOC111959032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111959032 isoform X2
translation: MEKCRLSAVLLLAHIGLSSVFPSGSFEGTTILTLLDQTPPPSSGAVAGIVTAALLVTVVVTATAYLIIVRKRHKALFNPSVSIDASSLVVNADRTGTGREEDLVYSEIVRFNIDKSKAHDPSGEDQKDADVKPAEEVTYSAVAVGNQHPLREDTVYSQVVRKDWDIDDVWTV
SIO_010081: LOC111959032
subclass of: SO_0000673
so part of: LOC111959032
location: complement(join(673101..673316,673460..673512,673608..673642,673754..673862,674321..674368,675021..675078))
location: region:673101-675078:-1
so has part: feature:675021-675078:-1:exon
so has part: feature:674321-674368:-1:exon
so has part: feature:673754-673862:-1:exon
so has part: feature:673608-673642:-1:exon
so has part: feature:673460-673512:-1:exon
so has part: feature:673101-673316:-1:exon

XP_023836211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675021-675078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:674321-674368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673754-673862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:673608-673642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673460-673512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:673101-673316:-1:exon

LOC111959032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell immunoreceptor with Ig and ITIM domains isoform X1
translation: MEKCRLSAVLLLAHIGLSSVLEAQVSVESHVTGYLGNDVILRCKLLQGNLTQAEWQLEKSDTKRVSIAVFSPNLGLNISGSPLKGRLEFAGASTDDSSITIKDVEMTDAGKYICLLTVFPSGSFEGTTILTLLDQTPPPSSGAVAGIVTAALLVTVVVTATAYLIIVRKRHKALFNPSVSIDASSLVVNADRTGTGREEDLVYSEIVRFNIDKSKAHDPSGEDQKDADVKPAEEVTYSAVAVGNQHPLREDTVYSQVVRKDWDIDDVWTV
SIO_010081: LOC111959032
subclass of: SO_0000673
so part of: LOC111959032
location: complement(join(673101..673316,673460..673512,673608..673642,673754..673862,674321..674662,675021..675078))
location: region:673101-675078:-1
so has part: feature:675021-675078:-1:exon
so has part: feature:674321-674662:-1:exon
so has part: feature:673754-673862:-1:exon
so has part: feature:673608-673642:-1:exon
so has part: feature:673460-673512:-1:exon
so has part: feature:673101-673316:-1:exon

XP_023836210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675021-675078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:674321-674662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673754-673862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:673608-673642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673460-673512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:673101-673316:-1:exon

LOC111958748
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(676048..682699)
location: region:676048-682699:-1
so has part: feature:676048-682699:-1:exon
subclass of: SO_0000010

111958748
type: Gene
SIO_000068: ncbigene

position:676048:-1
position: 676048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682699:-1
position: 682699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676048-682699:-1:exon

LOC111958748
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958748
product: carcinoembryonic antigen-related cell adhesion molecule 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_023980003.1
SIO_010081: LOC111958748
subclass of: SO_0000673
so part of: LOC111958748
location: complement(join(676048..676633,677092..677123,677832..677878,677991..678107,678450..678478,678731..678842,678983..679237,680715..680987,681588..681908,682524..682699))
location: region:676048-682699:-1
so has part: feature:682524-682699:-1:exon
so has part: feature:681588-681908:-1:exon
so has part: feature:680715-680987:-1:exon
so has part: feature:678983-679237:-1:exon
so has part: feature:678731-678842:-1:exon
so has part: feature:678450-678478:-1:exon
so has part: feature:677991-678107:-1:exon
so has part: feature:677832-677878:-1:exon
so has part: feature:677092-677123:-1:exon
so has part: feature:676048-676633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:682524-682699:-1:exon

position:682524:-1
position: 682524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:681588-681908:-1:exon

position:681588:-1
position: 681588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681908:-1
position: 681908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:680715-680987:-1:exon

position:680715:-1
position: 680715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680987:-1
position: 680987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:678983-679237:-1:exon

position:678983:-1
position: 678983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679237:-1
position: 679237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:678731-678842:-1:exon

position:678731:-1
position: 678731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678842:-1
position: 678842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:678450-678478:-1:exon

position:678450:-1
position: 678450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678478:-1
position: 678478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:677991-678107:-1:exon

position:677991:-1
position: 677991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678107:-1
position: 678107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:677832-677878:-1:exon

position:677832:-1
position: 677832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677878:-1
position: 677878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:677092-677123:-1:exon

position:677092:-1
position: 677092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677123:-1
position: 677123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:676048-676633:-1:exon

position:676633:-1
position: 676633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958748
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 6
translation: METAVAISLTLFILTGLCAGQGLFPQGPVNGAEGGTAMFIPNLSPPVKPFIRISWSVGGVSIIAYKSNDSIGPGYGGRITLNKTTGCLELRNLTLADRGEYRVSITTAKTETINGSTELVVYENISDANITGPPNHLFADWSSANLTCEAAGNITVIQWMKEGQPLSGGNIFFSEENRTLFISPVKRHDSGGYVCKLTNPASSATASYRMIVNYGPESMTILGQNMAEVDTHTLIYCSVQSVPPATFTWWFNGQRTGVHEAGYIIRSVSYNNSGDYRCDARNDLTENVVSMGHSLSVKDKTPPPLSPAGAAGIAVAVMLVVVAVALGLYFGITHHRNNSTNTTETGSSHAPDTSHGPGSSHAPGTSQGPGTSLAPDTSHGPGTKGGRVYENVGPPLPPPRSSNIYNRSIK
SIO_010081: LOC111958748
subclass of: SO_0000673
so part of: LOC111958748
location: complement(join(676633,677092..677123,677832..677878,677991..678107,678450..678478,678731..678842,678983..679237,680715..680987,681588..681908,682524..682569))
location: region:676633-682569:-1
so has part: feature:682524-682569:-1:exon
so has part: feature:681588-681908:-1:exon
so has part: feature:680715-680987:-1:exon
so has part: feature:678983-679237:-1:exon
so has part: feature:678731-678842:-1:exon
so has part: feature:678450-678478:-1:exon
so has part: feature:677991-678107:-1:exon
so has part: feature:677832-677878:-1:exon
so has part: feature:677092-677123:-1:exon
so has part: feature:676633-676633:-1:exon

XP_023835771.1
type: Protein
SIO_000068: ncbiprotein

position:682569:-1
position: 682569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682524-682569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:681588-681908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:680715-680987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678983-679237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:678731-678842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678450-678478:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:677991-678107:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:677832-677878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:677092-677123:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:676633-676633:-1:exon

LOC112067734
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(692010..694420)
location: region:692010-694420:-1
so has part: feature:692010-694420:-1:exon
subclass of: SO_0000010

112067734
type: Gene
SIO_000068: ncbigene

position:692010:-1
position: 692010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694420:-1
position: 694420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692010-694420:-1:exon

LOC112067734
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC112067734
product: carcinoembryonic antigen-related cell adhesion molecule 20-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_024134901.1
SIO_010081: LOC112067734
subclass of: SO_0000673
so part of: LOC112067734
location: complement(join(692010..692177,692442..692561,692917..693165,693362..693637,693794..694114,694326..694420))
location: region:692010-694420:-1
so has part: feature:694326-694420:-1:exon
so has part: feature:693794-694114:-1:exon
so has part: feature:693362-693637:-1:exon
so has part: feature:692917-693165:-1:exon
so has part: feature:692442-692561:-1:exon
so has part: feature:692010-692177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694326-694420:-1:exon

position:694326:-1
position: 694326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:693794-694114:-1:exon

position:693794:-1
position: 693794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694114:-1
position: 694114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:693362-693637:-1:exon

position:693362:-1
position: 693362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693637:-1
position: 693637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:692917-693165:-1:exon

position:692917:-1
position: 692917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693165:-1
position: 693165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:692442-692561:-1:exon

position:692442:-1
position: 692442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692561:-1
position: 692561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:692010-692177:-1:exon

position:692177:-1
position: 692177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112067734
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC112067734
product: carcinoembryonic antigen-related cell adhesion molecule 20-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_024134900.1
SIO_010081: LOC112067734
subclass of: SO_0000673
so part of: LOC112067734
location: complement(join(692010..692561,692917..693165,693362..693637,693794..694114,694326..694420))
location: region:692010-694420:-1
so has part: feature:694326-694420:-1:exon
so has part: feature:693794-694114:-1:exon
so has part: feature:693362-693637:-1:exon
so has part: feature:692917-693165:-1:exon
so has part: feature:692010-692561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694326-694420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693794-694114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693362-693637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692917-693165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692010-692561:-1:exon

LOC112067734
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC112067734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 20-like
translation: MDYTLFTAAIVFLTSGLCVGQNVLPPGPLTGAIGRRVTFTTTLSPPAKPFVSVSWTFNRVNIITSTTVNITNADYKDRISLDRTTGSLELWNLGLRDQGEYRVSIIPDGALELQGATTLDVYVLLSAATLTSPPATLIAGISSXNLTCEAAGNISSIQWIKDGLPLSPSNNITFSADNRTVYLSPVQDIDNGEYDCLVSNPVSNRTASHNLTVNFGPQNISIDGPLAASTGYRVTLSCSADSIPPATFTWMFNRTETGVNNTLYVIERMEALHIGNYTCTATNNITGLKDSVVHKLRGSSAAPIGSFALMVTSVMAAGLLQL
SIO_010081: LOC112067734
subclass of: SO_0000673
so part of: LOC112067734
location: complement(join(692485..692561,692917..693165,693362..693637,693794..694114,694326..694371))
location: region:692485-694371:-1
so has part: feature:694326-694371:-1:exon
so has part: feature:693794-694114:-1:exon
so has part: feature:693362-693637:-1:exon
so has part: feature:692917-693165:-1:exon
so has part: feature:692485-692561:-1:exon

XP_023990668.1
type: Protein
SIO_000068: ncbiprotein

position:692485:-1
position: 692485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694371:-1
position: 694371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694326-694371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693794-694114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693362-693637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692917-693165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692485-692561:-1:exon

LOC112067734
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC112067734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 20-like
translation: MDYTLFTAAIVFLTSGLCVGQNVLPPGPLTGAIGRRVTFTTTLSPPAKPFVSVSWTFNRVNIITSTTVNITNADYKDRISLDRTTGSLELWNLGLRDQGEYRVSIIPDGALELQGATTLDVYVLLSAATLTSPPATLIAGISSXNLTCEAAGNISSIQWIKDGLPLSPSNNITFSADNRTVYLSPVQDIDNGEYDCLVSNPVSNRTASHNLTVNFGPQNISIDGPLAASTGYRVTLSCSADSIPPATFTWMFNRTETGVNNTLYVIERMEALHIGNYTCTATNNITGLKDSVVHKLRGSSAAPIGSFALMVTSVMAAGLLQL
SIO_010081: LOC112067734
subclass of: SO_0000673
so part of: LOC112067734
location: complement(join(692485..692561,692917..693165,693362..693637,693794..694114,694326..694371))
location: region:692485-694371:-1
so has part: feature:694326-694371:-1:exon
so has part: feature:693794-694114:-1:exon
so has part: feature:693362-693637:-1:exon
so has part: feature:692917-693165:-1:exon
so has part: feature:692485-692561:-1:exon

XP_023990669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694326-694371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693794-694114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693362-693637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692917-693165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692485-692561:-1:exon

LOC111958542
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(701342..704921)
location: region:701342-704921:-1
so has part: feature:701342-704921:-1:exon
subclass of: SO_0000010

111958542
type: Gene
SIO_000068: ncbigene

position:701342:-1
position: 701342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704921:-1
position: 704921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701342-704921:-1:exon

LOC111958542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958542
product: carcinoembryonic antigen-related cell adhesion molecule 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023979799.1
SIO_010081: LOC111958542
subclass of: SO_0000673
so part of: LOC111958542
location: complement(join(701342..702077,702228..702494,703416..703733,704254..704921))
location: region:701342-704921:-1
so has part: feature:704254-704921:-1:exon
so has part: feature:703416-703733:-1:exon
so has part: feature:702228-702494:-1:exon
so has part: feature:701342-702077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704254-704921:-1:exon

position:704254:-1
position: 704254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:703416-703733:-1:exon

position:703416:-1
position: 703416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703733:-1
position: 703733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:702228-702494:-1:exon

position:702228:-1
position: 702228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702494:-1
position: 702494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:701342-702077:-1:exon

position:702077:-1
position: 702077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 1-like
translation: MKVAAIFIFTMAVLSGSCYGLGVLPDGPLVAAVGNVTFTTAVDPAVNMSTIFWSANGLHIINATITHDSIRPGYEDRVTLDRTTGSLELRDLAPWDGAKYKVSLFLKEGSPLGGETRLEVYDGPENTTMKVTPLDVLYGSGSDLTLSCSAESSPPAQFQWDLNGTLLSNKGPELRLENIQASQSGSYSCWAHNTRTLRYZTSEPSDITVLESISGATFITSPNLRIIQGSSVTLTCDASCFNITRDRMKDGQHLSAGVNITISEDKTASINPVNTCANSPTQSALLRLNTV
SIO_010081: LOC111958542
subclass of: SO_0000673
so part of: LOC111958542
location: complement(join(701833..702077,702228..702494,703416..703733,704254..704299))
location: region:701833-704299:-1
so has part: feature:704254-704299:-1:exon
so has part: feature:703416-703733:-1:exon
so has part: feature:702228-702494:-1:exon
so has part: feature:701833-702077:-1:exon

XP_023835567.1
type: Protein
SIO_000068: ncbiprotein

position:701833:-1
position: 701833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704299:-1
position: 704299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704254-704299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:703416-703733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702228-702494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701833-702077:-1:exon

LOC111958538
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(706122..715807)
location: region:706122-715807:-1
so has part: feature:706122-715807:-1:exon
subclass of: SO_0000010

111958538
type: Gene
SIO_000068: ncbigene

position:706122:-1
position: 706122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715807:-1
position: 715807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706122-715807:-1:exon

LOC111958538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958538
product: carcinoembryonic antigen-related cell adhesion molecule 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023979791.2
SIO_010081: LOC111958538
subclass of: SO_0000673
so part of: LOC111958538
location: complement(join(706122..706433,706589..706621,706960..707105,707370..707398,707648..707768,708121..708375,708654..708923,714523..714846,715580..715807))
location: region:706122-715807:-1
so has part: feature:715580-715807:-1:exon
so has part: feature:714523-714846:-1:exon
so has part: feature:708654-708923:-1:exon
so has part: feature:708121-708375:-1:exon
so has part: feature:707648-707768:-1:exon
so has part: feature:707370-707398:-1:exon
so has part: feature:706960-707105:-1:exon
so has part: feature:706589-706621:-1:exon
so has part: feature:706122-706433:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:715580-715807:-1:exon

position:715580:-1
position: 715580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:714523-714846:-1:exon

position:714523:-1
position: 714523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714846:-1
position: 714846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:708654-708923:-1:exon

position:708654:-1
position: 708654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708923:-1
position: 708923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:708121-708375:-1:exon

position:708121:-1
position: 708121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708375:-1
position: 708375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:707648-707768:-1:exon

position:707648:-1
position: 707648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707768:-1
position: 707768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:707370-707398:-1:exon

position:707370:-1
position: 707370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707398:-1
position: 707398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:706960-707105:-1:exon

position:706960:-1
position: 706960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707105:-1
position: 707105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:706589-706621:-1:exon

position:706589:-1
position: 706589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706621:-1
position: 706621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:706122-706433:-1:exon

position:706433:-1
position: 706433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958538
product: carcinoembryonic antigen-related cell adhesion molecule 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023979790.2
SIO_010081: LOC111958538
subclass of: SO_0000673
so part of: LOC111958538
location: complement(join(706130..706436,706589..706621,706960..707105,707370..707398,707648..707768,708121..708375,708654..708923,714523..714846,715580..715807))
location: region:706130-715807:-1
so has part: feature:715580-715807:-1:exon
so has part: feature:714523-714846:-1:exon
so has part: feature:708654-708923:-1:exon
so has part: feature:708121-708375:-1:exon
so has part: feature:707648-707768:-1:exon
so has part: feature:707370-707398:-1:exon
so has part: feature:706960-707105:-1:exon
so has part: feature:706589-706621:-1:exon
so has part: feature:706130-706436:-1:exon

position:706130:-1
position: 706130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715580-715807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714523-714846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708654-708923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708121-708375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707648-707768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707370-707398:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706960-707105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706589-706621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706130-706436:-1:exon

position:706436:-1
position: 706436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 1-like isoform X2
translation: MVASVVIFLTMAKLSEYCAGLEVLPPGPVNRSLGGNVFFKTTINPTTLSAIVWTFGDPPVIIVDFLSSEGPVIGEGYVGRISLDNXTGSLELLKLTIADNGEYRVILRESDLMYLSNTSLNVYETVSGATITITPNPPIIEGGSVTLTCDAAGFNITREWMKDGHPVSSGDNIILSEDKRVLSIKKRTDSGEYLCRVSNPVSSENASDTVNVIYGPDGMEIKGPTKIEVGQKFTLTCSTDSNPPANYTWVLNGTKVPGHSPEFTKQKSEYSDSGDYTCTATNDVTGNKISVVLKLSVKAVGSLTPDGLSVVVITGIVIIVLLVVEVAVSVAVYFIKTNISYVEPMHRGGSQQPVYENPSPVYENPSPVYENPSPVYENPSPVRDNTLQNQSPPLPLTDFKSTYDTRIM
SIO_010081: LOC111958538
subclass of: SO_0000673
so part of: LOC111958538
location: complement(join(706431..706433,706589..706621,706960..707105,707370..707398,707648..707768,708121..708375,708654..708923,714523..714846,715580..715625))
location: region:706431-715625:-1
so has part: feature:715580-715625:-1:exon
so has part: feature:714523-714846:-1:exon
so has part: feature:708654-708923:-1:exon
so has part: feature:708121-708375:-1:exon
so has part: feature:707648-707768:-1:exon
so has part: feature:707370-707398:-1:exon
so has part: feature:706960-707105:-1:exon
so has part: feature:706589-706621:-1:exon
so has part: feature:706431-706433:-1:exon

XP_023835559.1
type: Protein
SIO_000068: ncbiprotein

position:706431:-1
position: 706431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715625:-1
position: 715625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715580-715625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714523-714846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708654-708923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708121-708375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707648-707768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707370-707398:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706960-707105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706589-706621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706431-706433:-1:exon

LOC111958538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 1-like isoform X1
translation: MVASVVIFLTMAKLSEYCAGLEVLPPGPVNRSLGGNVFFKTTINPTTLSAIVWTFGDPPVIIVDFLSSEGPVIGEGYVGRISLDNXTGSLELLKLTIADNGEYRVILRESDLMYLSNTSLNVYETVSGATITITPNPPIIEGGSVTLTCDAAGFNITREWMKDGHPVSSGDNIILSEDKRVLSIKKRTDSGEYLCRVSNPVSSENASDTVNVIYGPDGMEIKGPTKIEVGQKFTLTCSTDSNPPANYTWVLNGTKVPGHSPEFTKQKSEYSDSGDYTCTATNDVTGNKISVVLKLSVKAVGSLTPDGLSVVVITGIVIIVLLVVEVAVSVAVYFIKTNISYVEPMHRGGSQQPVYENPSPVYENPSPVYENPSPVYENPSPVRDNTLQNQSPPLPLTDFKSTYDTRIMQ
SIO_010081: LOC111958538
subclass of: SO_0000673
so part of: LOC111958538
location: complement(join(706431..706436,706589..706621,706960..707105,707370..707398,707648..707768,708121..708375,708654..708923,714523..714846,715580..715625))
location: region:706431-715625:-1
so has part: feature:715580-715625:-1:exon
so has part: feature:714523-714846:-1:exon
so has part: feature:708654-708923:-1:exon
so has part: feature:708121-708375:-1:exon
so has part: feature:707648-707768:-1:exon
so has part: feature:707370-707398:-1:exon
so has part: feature:706960-707105:-1:exon
so has part: feature:706589-706621:-1:exon
so has part: feature:706431-706436:-1:exon

XP_023835558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:715580-715625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714523-714846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708654-708923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708121-708375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707648-707768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707370-707398:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706960-707105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706589-706621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706431-706436:-1:exon

LOC111958546
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(724176..732063)
location: region:724176-732063:-1
so has part: feature:724176-732063:-1:exon
subclass of: SO_0000011

111958546
type: Gene
SIO_000068: ncbigene

position:724176:-1
position: 724176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732063:-1
position: 732063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724176-732063:-1:exon

LOC111958546
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111958546
product: uncharacterized LOC111958546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002876551.1
SIO_010081: LOC111958546
subclass of: SO_0000673
so part of: LOC111958546
location: complement(join(724176..724540,727944..728070,731995..732063))
location: region:724176-732063:-1
so has part: feature:731995-732063:-1:exon
so has part: feature:727944-728070:-1:exon
so has part: feature:724176-724540:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731995-732063:-1:exon

position:731995:-1
position: 731995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:727944-728070:-1:exon

position:727944:-1
position: 727944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728070:-1
position: 728070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724176-724540:-1:exon

position:724540:-1
position: 724540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958543
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 761008..764487
location: region:761008-764487:1
so has part: feature:761008-764487:1:exon
subclass of: SO_0000010

111958543
type: Gene
SIO_000068: ncbigene

position:761008:1
position: 761008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764487:1
position: 764487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761008-764487:1:exon

LOC111958543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958543
product: carcinoembryonic antigen-related cell adhesion molecule 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_023979800.2
SIO_010081: LOC111958543
subclass of: SO_0000673
so part of: LOC111958543
location: join(761008..761089,761952..761996,762915..763190,763321..763596,764115..764487)
location: region:761008-764487:1
so has part: feature:761008-761089:1:exon
so has part: feature:761952-761996:1:exon
so has part: feature:762915-763190:1:exon
so has part: feature:763321-763596:1:exon
so has part: feature:764115-764487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761008-761089:1:exon

position:761089:1
position: 761089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:761952-761996:1:exon

position:761952:1
position: 761952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761996:1
position: 761996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:762915-763190:1:exon

position:762915:1
position: 762915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763190:1
position: 763190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:763321-763596:1:exon

position:763321:1
position: 763321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763596:1
position: 763596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:764115-764487:1:exon

position:764115:1
position: 764115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958543
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8036
gene: LOC111958543
product: carcinoembryonic antigen-related cell adhesion molecule 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002876550.2
SIO_010081: LOC111958543
so part of: LOC111958543
location: join(761008..761089,761952..761996,762915..763190,763321..763596,763692..763793,764115..764205)
location: region:761008-764205:1
so has part: feature:761008-761089:1:exon
so has part: feature:761952-761996:1:exon
so has part: feature:762915-763190:1:exon
so has part: feature:763321-763596:1:exon
so has part: feature:763692-763793:1:exon
so has part: feature:764115-764205:1:exon

position:764205:1
position: 764205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761008-761089:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761952-761996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:762915-763190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763321-763596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763692-763793:1:exon

position:763692:1
position: 763692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763793:1
position: 763793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:764115-764205:1:exon

LOC111958543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 20
translation: MAFYLKTFYTVLVLTLTGGLDPTSVSAASPNPSSVSVRPSPQLSLPVLNQSFSLDCKGSFPGLPVLWYKDGQVVAPDARINLLEHNTSLHFNSLLPSDGGFYQCEVTMANMAESKVISLGYLLNFDHWXVSISGPDTVFPGREYTFTCQVNCTVDLDCSIRWPLRGGILTSAYFSVRKNILKWIPSVPGTVQIFTCVVENTAAGXSAEASKTVKVTGPTVSGSEAVRLSGVLGLVLCVGQLFLLDP
SIO_010081: LOC111958543
subclass of: SO_0000673
so part of: LOC111958543
location: join(761038..761089,761952..761996,762915..763190,763321..763596,764115..764206)
location: region:761038-764206:1
so has part: feature:761038-761089:1:exon
so has part: feature:761952-761996:1:exon
so has part: feature:762915-763190:1:exon
so has part: feature:763321-763596:1:exon
so has part: feature:764115-764206:1:exon

XP_023835568.1
type: Protein
SIO_000068: ncbiprotein

position:761038:1
position: 761038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764206:1
position: 764206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761038-761089:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761952-761996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:762915-763190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763321-763596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:764115-764206:1:exon

LOC111958597
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 792008..799299
location: region:792008-799299:1
so has part: feature:792008-799299:1:exon
subclass of: SO_0000010

111958597
type: Gene
SIO_000068: ncbigene

position:792008:1
position: 792008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799299:1
position: 799299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:792008-799299:1:exon

LOC111958597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958597
product: carcinoembryonic antigen-related cell adhesion molecule 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023979862.2
SIO_010081: LOC111958597
subclass of: SO_0000673
so part of: LOC111958597
location: join(792008..792200,792604..792903,793656..793937,794199..794474,794612..794884,797018..797142,799258..799299)
location: region:792008-799299:1
so has part: feature:792008-792200:1:exon
so has part: feature:792604-792903:1:exon
so has part: feature:793656-793937:1:exon
so has part: feature:794199-794474:1:exon
so has part: feature:794612-794884:1:exon
so has part: feature:797018-797142:1:exon
so has part: feature:799258-799299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:792008-792200:1:exon

position:792200:1
position: 792200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:792604-792903:1:exon

position:792604:1
position: 792604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792903:1
position: 792903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:793656-793937:1:exon

position:793656:1
position: 793656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793937:1
position: 793937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:794199-794474:1:exon

position:794199:1
position: 794199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794474:1
position: 794474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:794612-794884:1:exon

position:794612:1
position: 794612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794884:1
position: 794884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:797018-797142:1:exon

position:797018:1
position: 797018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797142:1
position: 797142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:799258-799299:1:exon

position:799258:1
position: 799258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 5-like
translation: MDHPLVWVLILVLLNFNTDVSGQVVVPSMNPLAVGSNVTLNLVPESPINIGTWSYETTTIVLFYPGGSIMSTSYRGRVSFNRSSSELSISSLQLNDSGRYTVXGMEPVLTAVVTLSVQEPISNVTLRANATDLVELNDTAIVTCSVSSGTSLSYRWMNGSSEVAASDRVRLGVGNSTLSIVSVTRYDEGPFRCEVINGISDGTSQPIGLNVRYGPSNLTMMVAPEMTIGHTAYKTGSVITLSCSAQSKPAVSYKWRFNGVFLNEQSPQLSLQNTRENQTGSYACLAHNNVTLRYATMTTMIKIVEPISAVTLNRDGKPPILDQSFTLRCEVTGPVDYIHWLMNGQLISLNRTFFSTGNKTMVINPIQFSDSGEYLCEAFNDVSNKTSMTYKLVVNYGPERPVIMSPDIEMTGHTVTFNCSASSQPTSQFSWFFNGSQVRTGFSVVRLPMT
SIO_010081: LOC111958597
subclass of: SO_0000673
so part of: LOC111958597
location: join(792146..792200,792604..792903,793656..793937,794199..794474,794612..794884,797018..797142,799258..799299)
location: region:792146-799299:1
so has part: feature:792146-792200:1:exon
so has part: feature:792604-792903:1:exon
so has part: feature:793656-793937:1:exon
so has part: feature:794199-794474:1:exon
so has part: feature:794612-794884:1:exon
so has part: feature:797018-797142:1:exon
so has part: feature:799258-799299:1:exon

XP_023835630.1
type: Protein
SIO_000068: ncbiprotein

position:792146:1
position: 792146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:792146-792200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792604-792903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793656-793937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794199-794474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:794612-794884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797018-797142:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799258-799299:1:exon

LOC111958544
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 806739..809129
location: region:806739-809129:1
so has part: feature:806739-809129:1:exon
subclass of: SO_0000010

111958544
type: Gene
SIO_000068: ncbigene

position:806739:1
position: 806739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809129:1
position: 809129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806739-809129:1:exon

LOC111958544
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958544
product: carcinoembryonic antigen-related cell adhesion molecule 20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_023979801.2
SIO_010081: LOC111958544
subclass of: SO_0000673
so part of: LOC111958544
location: join(806739..807047,807334..807591,808331..809129)
location: region:806739-809129:1
so has part: feature:806739-807047:1:exon
so has part: feature:807334-807591:1:exon
so has part: feature:808331-809129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806739-807047:1:exon

position:807047:1
position: 807047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807334-807591:1:exon

position:807334:1
position: 807334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807591:1
position: 807591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808331-809129:1:exon

position:808331:1
position: 808331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958544
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 20-like
translation: MKDNRSLVLNNTLNSDITISNNSLHFSSVKVSNDGNYQCVATNLFGPNTSPKYQLLVNYGPKSVNISGPVSVVIGSVITATLKCSADSRPTSEYGWKFNNQSVLGTGPMMSVIASLENAGDYTCVAKNPVTNISMSKTISLDVTGHSPAPPFQSRVGLILTALLALSLCI
SIO_010081: LOC111958544
subclass of: SO_0000673
so part of: LOC111958544
location: join(806873..807047,807334..807591,808331..808410)
location: region:806873-808410:1
so has part: feature:806873-807047:1:exon
so has part: feature:807334-807591:1:exon
so has part: feature:808331-808410:1:exon

XP_023835569.1
type: Protein
SIO_000068: ncbiprotein

position:806873:1
position: 806873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808410:1
position: 808410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806873-807047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807334-807591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808331-808410:1:exon

LOC111958545
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 829450..830499
location: region:829450-830499:1
so has part: feature:829450-830499:1:exon

111958545
type: Gene
SIO_000068: ncbigene

position:829450:1
position: 829450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830499:1
position: 830499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829450-830499:1:exon

LOC111958545
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958545
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958545
subclass of: SO_0000673
so part of: LOC111958545
location: 829450..830499
location: region:829450-830499:1
so has part: feature:829450-830499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829450-830499:1:exon

LOC111958541
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(835646..842490)
location: region:835646-842490:-1
so has part: feature:835646-842490:-1:exon
subclass of: SO_0000010

111958541
type: Gene
SIO_000068: ncbigene

position:835646:-1
position: 835646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842490:-1
position: 842490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835646-842490:-1:exon

LOC111958541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958541
product: carcinoembryonic antigen-related cell adhesion molecule 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023979796.2
SIO_010081: LOC111958541
subclass of: SO_0000673
so part of: LOC111958541
location: complement(join(835646..835733,836367..836624,836898..837176,839048..839299,839832..840033,841591..841890,842294..842475))
location: region:835646-842475:-1
so has part: feature:842294-842475:-1:exon
so has part: feature:841591-841890:-1:exon
so has part: feature:839832-840033:-1:exon
so has part: feature:839048-839299:-1:exon
so has part: feature:836898-837176:-1:exon
so has part: feature:836367-836624:-1:exon
so has part: feature:835646-835733:-1:exon

position:842475:-1
position: 842475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842294-842475:-1:exon

position:842294:-1
position: 842294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841591-841890:-1:exon

position:841591:-1
position: 841591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841890:-1
position: 841890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:839832-840033:-1:exon

position:839832:-1
position: 839832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840033:-1
position: 840033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:839048-839299:-1:exon

position:839048:-1
position: 839048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839299:-1
position: 839299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:836898-837176:-1:exon

position:836898:-1
position: 836898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837176:-1
position: 837176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:836367-836624:-1:exon

position:836367:-1
position: 836367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836624:-1
position: 836624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:835646-835733:-1:exon

position:835733:-1
position: 835733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958541
product: carcinoembryonic antigen-related cell adhesion molecule 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023979798.2
SIO_010081: LOC111958541
subclass of: SO_0000673
so part of: LOC111958541
location: complement(join(835646..835733,836367..836624,836898..837176,839048..839299,839832..840033,840615..840896,841591..841890,842294..842475))
location: region:835646-842475:-1
so has part: feature:842294-842475:-1:exon
so has part: feature:841591-841890:-1:exon
so has part: feature:840615-840896:-1:exon
so has part: feature:839832-840033:-1:exon
so has part: feature:839048-839299:-1:exon
so has part: feature:836898-837176:-1:exon
so has part: feature:836367-836624:-1:exon
so has part: feature:835646-835733:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:842294-842475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841591-841890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840615-840896:-1:exon

position:840615:-1
position: 840615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840896:-1
position: 840896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:839832-840033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:839048-839299:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836898-837176:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836367-836624:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:835646-835733:-1:exon

LOC111958541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958541
product: carcinoembryonic antigen-related cell adhesion molecule 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_023979795.2
SIO_010081: LOC111958541
subclass of: SO_0000673
so part of: LOC111958541
location: complement(join(835646..835733,836367..836624,836898..837176,839048..839299,839433..839579))
location: region:835646-839579:-1
so has part: feature:839433-839579:-1:exon
so has part: feature:839048-839299:-1:exon
so has part: feature:836898-837176:-1:exon
so has part: feature:836367-836624:-1:exon
so has part: feature:835646-835733:-1:exon

position:839579:-1
position: 839579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839433-839579:-1:exon

position:839433:-1
position: 839433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:839048-839299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836898-837176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836367-836624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835646-835733:-1:exon

LOC111958541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 5-like isoform X3
translation: MLTVIDGPMQPVIAGAPIAEREQRVTFNCSSSSQPLSQFSWFFNGSQVATGSVYETGPLTLASHGEYTCVAFNNVTVRNSTVSKMLTIIEAITSVMVKRNKLPIASDNLTLTCEVTGRYDTIDWMKDNRSLVLNNNLNSDITISNNSLHFSPVKVSNDGNYQCVATNLFGPHISPKYQLLVNYGPLSVNISGPGLVVIGSVINANLKCSADSRPTSEYWWKYINKSLPATGPLMAVGISLKNARIYTCVAKNPLTNISMSKTISLDVTGPSPVPPFQSRVV
SIO_010081: LOC111958541
subclass of: SO_0000673
so part of: LOC111958541
location: complement(join(835693..835733,836367..836624,836898..837176,839048..839299,839832..839847))
location: region:835693-839847:-1
so has part: feature:839832-839847:-1:exon
so has part: feature:839048-839299:-1:exon
so has part: feature:836898-837176:-1:exon
so has part: feature:836367-836624:-1:exon
so has part: feature:835693-835733:-1:exon

XP_023835564.1
type: Protein
SIO_000068: ncbiprotein

position:835693:-1
position: 835693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839847:-1
position: 839847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839832-839847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839048-839299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836898-837176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836367-836624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835693-835733:-1:exon

LOC111958541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 5-like isoform X3
translation: MLTVIDGPMQPVIAGAPIAEREQRVTFNCSSSSQPLSQFSWFFNGSQVATGSVYETGPLTLASHGEYTCVAFNNVTVRNSTVSKMLTIIEAITSVMVKRNKLPIASDNLTLTCEVTGRYDTIDWMKDNRSLVLNNNLNSDITISNNSLHFSPVKVSNDGNYQCVATNLFGPHISPKYQLLVNYGPLSVNISGPGLVVIGSVINANLKCSADSRPTSEYWWKYINKSLPATGPLMAVGISLKNARIYTCVAKNPLTNISMSKTISLDVTGPSPVPPFQSRVV
SIO_010081: LOC111958541
subclass of: SO_0000673
so part of: LOC111958541
location: complement(join(835693..835733,836367..836624,836898..837176,839048..839299,839832..839847))
location: region:835693-839847:-1
so has part: feature:839832-839847:-1:exon
so has part: feature:839048-839299:-1:exon
so has part: feature:836898-837176:-1:exon
so has part: feature:836367-836624:-1:exon
so has part: feature:835693-835733:-1:exon

XP_023835566.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:839832-839847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839048-839299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836898-837176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836367-836624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835693-835733:-1:exon

LOC111958541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 5-like isoform X2
translation: MARNSVSNRTSTRYTLLVNYGPMQPVIAGAPIAEREQRVTFNCSSSSQPLSQFSWFFNGSQVATGSVYETGPLTLASHGEYTCVAFNNVTVRNSTVSKMLTIIEAITSVMVKRNKLPIASDNLTLTCEVTGRYDTIDWMKDNRSLVLNNNLNSDITISNNSLHFSPVKVSNDGNYQCVATNLFGPHISPKYQLLVNYGPLSVNISGPGLVVIGSVINANLKCSADSRPTSEYWWKYINKSLPATGPLMAVGISLKNARIYTCVAKNPLTNISMSKTISLDVTGPSPVPPFQSRVV
SIO_010081: LOC111958541
subclass of: SO_0000673
so part of: LOC111958541
location: complement(join(835693..835733,836367..836624,836898..837176,839048..839299,839433..839490))
location: region:835693-839490:-1
so has part: feature:839433-839490:-1:exon
so has part: feature:839048-839299:-1:exon
so has part: feature:836898-837176:-1:exon
so has part: feature:836367-836624:-1:exon
so has part: feature:835693-835733:-1:exon

XP_023835563.1
type: Protein
SIO_000068: ncbiprotein

position:839490:-1
position: 839490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839433-839490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839048-839299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836898-837176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836367-836624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835693-835733:-1:exon

LOC111958541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958541
product: carcinoembryonic antigen-related cell adhesion molecule 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_023979794.2
SIO_010081: LOC111958541
subclass of: SO_0000673
so part of: LOC111958541
location: complement(join(839604..839708,839832..840033,840615..840896,841591..841890,842294..842490))
location: region:839604-842490:-1
so has part: feature:842294-842490:-1:exon
so has part: feature:841591-841890:-1:exon
so has part: feature:840615-840896:-1:exon
so has part: feature:839832-840033:-1:exon
so has part: feature:839604-839708:-1:exon

position:839604:-1
position: 839604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842294-842490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841591-841890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840615-840896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:839832-840033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:839604-839708:-1:exon

position:839708:-1
position: 839708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carcinoembryonic antigen-related cell adhesion molecule 1-like isoform X1
translation: MDHPLVWVLILVLLNFNTDVSGQVVVPSMNPLAVGSNVTLNLVPESPINIGTWSYETTTIVLFYPXGSILSTSYRGRVSFNRSSSELSISSLQLNDSGRYTVXGMEPVLTAVVTLSVQEPISNVTLRANATDLVELNDTAIVTCSVSSGTSFSYRWMNGSSEVAASDRVRLGVGNSTFTIVSVTRYDEGPFRCEVINGISDGTSQPIGLNVRFGPERPAVTSPELAMTGHVVTFNCSASSQPPSQFSLFFNGSSWVVHLCGLQQPHCQKQHCLQDAHCYCANNLSVHKHRWKPGDRW
SIO_010081: LOC111958541
subclass of: SO_0000673
so part of: LOC111958541
location: complement(join(839654..839708,839832..840033,840615..840896,841591..841890,842294..842348))
location: region:839654-842348:-1
so has part: feature:842294-842348:-1:exon
so has part: feature:841591-841890:-1:exon
so has part: feature:840615-840896:-1:exon
so has part: feature:839832-840033:-1:exon
so has part: feature:839654-839708:-1:exon

XP_023835562.1
type: Protein
SIO_000068: ncbiprotein

position:839654:-1
position: 839654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842348:-1
position: 842348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842294-842348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841591-841890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840615-840896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:839832-840033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:839654-839708:-1:exon

LOC111959004
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(876247..880394)
location: region:876247-880394:-1
so has part: feature:876247-880394:-1:exon
subclass of: SO_0000010

111959004
type: Gene
SIO_000068: ncbigene

position:876247:-1
position: 876247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880394:-1
position: 880394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876247-880394:-1:exon

LOC111959004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959004
product: platelet-activating factor acetylhydrolase IB subunit gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023980399.2
SIO_010081: LOC111959004
subclass of: SO_0000673
so part of: LOC111959004
location: complement(join(876247..877160,877927..878049,878248..878364,878559..878648,878820..878912,880287..880394))
location: region:876247-880394:-1
so has part: feature:880287-880394:-1:exon
so has part: feature:878820-878912:-1:exon
so has part: feature:878559-878648:-1:exon
so has part: feature:878248-878364:-1:exon
so has part: feature:877927-878049:-1:exon
so has part: feature:876247-877160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880287-880394:-1:exon

position:880287:-1
position: 880287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:878820-878912:-1:exon

position:878820:-1
position: 878820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878912:-1
position: 878912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:878559-878648:-1:exon

position:878559:-1
position: 878559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878648:-1
position: 878648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:878248-878364:-1:exon

position:878248:-1
position: 878248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878364:-1
position: 878364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:877927-878049:-1:exon

position:877927:-1
position: 877927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878049:-1
position: 878049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:876247-877160:-1:exon

position:877160:-1
position: 877160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111959004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959004
product: platelet-activating factor acetylhydrolase IB subunit gamma, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_023980400.2
SIO_010081: LOC111959004
subclass of: SO_0000673
so part of: LOC111959004
location: complement(join(876247..877160,877927..878049,878248..878364,878559..878648,878820..878912,879371..879467))
location: region:876247-879467:-1
so has part: feature:879371-879467:-1:exon
so has part: feature:878820-878912:-1:exon
so has part: feature:878559-878648:-1:exon
so has part: feature:878248-878364:-1:exon
so has part: feature:877927-878049:-1:exon
so has part: feature:876247-877160:-1:exon

position:879467:-1
position: 879467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879371-879467:-1:exon

position:879371:-1
position: 879371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:878820-878912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878559-878648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878248-878364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877927-878049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876247-877160:-1:exon

LOC111959004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959004
product: platelet-activating factor acetylhydrolase IB subunit gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_023980398.2
SIO_010081: LOC111959004
subclass of: SO_0000673
so part of: LOC111959004
location: complement(join(876247..877160,877927..878049,878248..878364,878559..878648,878820..878912,879272..879364))
location: region:876247-879364:-1
so has part: feature:879272-879364:-1:exon
so has part: feature:878820-878912:-1:exon
so has part: feature:878559-878648:-1:exon
so has part: feature:878248-878364:-1:exon
so has part: feature:877927-878049:-1:exon
so has part: feature:876247-877160:-1:exon

position:879364:-1
position: 879364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879272-879364:-1:exon

position:879272:-1
position: 879272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:878820-878912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878559-878648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878248-878364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877927-878049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876247-877160:-1:exon

LOC111959004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit gamma isoform X2
translation: MEVETDKVMSSGDSNPAATPTPCVDIQGDGRWMSLHNHFVSNSKDKEPDVLFVGDSLVQLLHQFEVWRELFSPLHALNFGVGGDETQHVLWRLSNGELAHISPKVVVLWVGTHNHGHTAEQICGGIMAIVQLIKDKLPKAYTLVLGVLPRGKMPNPLRERNAQVNKLVKEAVSSLPHAXLLNVDPGFVHSDGSISHQDLYDFLHLTPQGYQAVCQPLHAHLKGLLEKQAEN
SIO_010081: LOC111959004
subclass of: SO_0000673
so part of: LOC111959004
location: complement(join(876900..877160,877927..878049,878248..878364,878559..878648,878820..878912,880287..880298))
location: region:876900-880298:-1
so has part: feature:880287-880298:-1:exon
so has part: feature:878820-878912:-1:exon
so has part: feature:878559-878648:-1:exon
so has part: feature:878248-878364:-1:exon
so has part: feature:877927-878049:-1:exon
so has part: feature:876900-877160:-1:exon

XP_023836167.1
type: Protein
SIO_000068: ncbiprotein

position:876900:-1
position: 876900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880298:-1
position: 880298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880287-880298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878820-878912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878559-878648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878248-878364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877927-878049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876900-877160:-1:exon

LOC111959004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit gamma isoform X1
translation: MHHIANASLTDKVMSSGDSNPAATPTPCVDIQGDGRWMSLHNHFVSNSKDKEPDVLFVGDSLVQLLHQFEVWRELFSPLHALNFGVGGDETQHVLWRLSNGELAHISPKVVVLWVGTHNHGHTAEQICGGIMAIVQLIKDKLPKAYTLVLGVLPRGKMPNPLRERNAQVNKLVKEAVSSLPHAXLLNVDPGFVHSDGSISHQDLYDFLHLTPQGYQAVCQPLHAHLKGLLEKQAEN
SIO_010081: LOC111959004
subclass of: SO_0000673
so part of: LOC111959004
location: complement(join(876900..877160,877927..878049,878248..878364,878559..878648,878820..878912,879272..879298))
location: region:876900-879298:-1
so has part: feature:879272-879298:-1:exon
so has part: feature:878820-878912:-1:exon
so has part: feature:878559-878648:-1:exon
so has part: feature:878248-878364:-1:exon
so has part: feature:877927-878049:-1:exon
so has part: feature:876900-877160:-1:exon

XP_023836166.1
type: Protein
SIO_000068: ncbiprotein

position:879298:-1
position: 879298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879272-879298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878820-878912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878559-878648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878248-878364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877927-878049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876900-877160:-1:exon

LOC111959004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit gamma isoform X3
translation: MSSGDSNPAATPTPCVDIQGDGRWMSLHNHFVSNSKDKEPDVLFVGDSLVQLLHQFEVWRELFSPLHALNFGVGGDETQHVLWRLSNGELAHISPKVVVLWVGTHNHGHTAEQICGGIMAIVQLIKDKLPKAYTLVLGVLPRGKMPNPLRERNAQVNKLVKEAVSSLPHAXLLNVDPGFVHSDGSISHQDLYDFLHLTPQGYQAVCQPLHAHLKGLLEKQAEN
SIO_010081: LOC111959004
subclass of: SO_0000673
so part of: LOC111959004
location: complement(join(876900..877160,877927..878049,878248..878364,878559..878648,878820..878900))
location: region:876900-878900:-1
so has part: feature:878820-878900:-1:exon
so has part: feature:878559-878648:-1:exon
so has part: feature:878248-878364:-1:exon
so has part: feature:877927-878049:-1:exon
so has part: feature:876900-877160:-1:exon

XP_023836168.1
type: Protein
SIO_000068: ncbiprotein

position:878900:-1
position: 878900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878820-878900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878559-878648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878248-878364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877927-878049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876900-877160:-1:exon

LOC111959003
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 880519..884415
location: region:880519-884415:1
so has part: feature:880519-884415:1:exon
subclass of: SO_0000010

111959003
type: Gene
SIO_000068: ncbigene

position:880519:1
position: 880519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884415:1
position: 884415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880519-884415:1:exon

LOC111959003
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959003
product: uncharacterized LOC111959003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_023980397.2
SIO_010081: LOC111959003
subclass of: SO_0000673
so part of: LOC111959003
location: join(880519..882217,882493..882650,882926..884415)
location: region:880519-884415:1
so has part: feature:880519-882217:1:exon
so has part: feature:882493-882650:1:exon
so has part: feature:882926-884415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880519-882217:1:exon

position:882217:1
position: 882217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882493-882650:1:exon

position:882493:1
position: 882493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882650:1
position: 882650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:882926-884415:1:exon

position:882926:1
position: 882926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111959003
translation: MMSHLHGRALTEKQNVLHVFSKHFKSTDKTCSPTNRSTPHCCSSSHTKNTEAQNSQTNKTKRLKTRKQRSQVSRGGSNSRSHQHQSSKEKDHCHGCCQSSSRPPPRRDAPLARVFPAGQEPSIITNNRLIGHHGLFNHEVKSIDIERLLSEQRKLEKLGQRGGRGKSTATRPPLPPSSSLPFSSPGPDSDVGEVAVPDHVEEDPDKGRVERVVAKSSTKANKRDEYRSNSESRLFKCSHGDTQEDFRRKFTSIQVCLEKNVASHSKSQESGITPGQTHHSGLTSSEGGIVTLSSTESPSRVVRNKSKGPRPVVCETLLSPSGKNENERPPDARAEVKPVVLTMEQTPKNHILPHTQPFRPSPNITVSSFPARGGSSESSDNQMQQTVTNPVSVVAARLCRSLQLPLLRRRNLVAESREVLLQALRERHGLQLQENLLNVQRRLSFGTGPTTTRAGLGQSTILAGIDAYGGWPAAPLDSGFGDSMVEHPCLDSQRSAPNKRRRRKQLCPNRMTPPQPLIGSQNSLDTAAAWNPNPSVEQVGELIGELLRPASSSHFLMDLQPSGSPSRHHVFDPPAASPWAAQSGLPQPWDDVFDRGSMRESTRVDHFENWRYDPDLSFLNQTETVRERSSGPFYHERSMQCFLQYPTGPPEGHRDRHLPQQQDPYDIERSHFGGSSSSFSAPTHYPLESHQLHPFYRFNRRPPTSPVISRSHLPDMAYYPPSHMLESGLSPPLPPVSLPAFPSPECWSFPRMRLY
SIO_010081: LOC111959003
subclass of: SO_0000673
so part of: LOC111959003
location: join(880798..882217,882493..882650,882926..883615)
location: region:880798-883615:1
so has part: feature:880798-882217:1:exon
so has part: feature:882493-882650:1:exon
so has part: feature:882926-883615:1:exon

XP_023836165.1
type: Protein
SIO_000068: ncbiprotein

position:880798:1
position: 880798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883615:1
position: 883615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880798-882217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:882493-882650:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882926-883615:1:exon

LOC111958598
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(885884..909206)
location: region:885884-909206:-1
so has part: feature:885884-909206:-1:exon

111958598
type: Gene
SIO_000068: ncbigene

position:885884:-1
position: 885884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909206:-1
position: 909206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885884-909206:-1:exon

LOC111958598
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958598
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958598
subclass of: SO_0000673
so part of: LOC111958598
location: complement(885884..887109)
location: region:885884-887109:-1
so has part: feature:885884-887109:-1:exon

position:887109:-1
position: 887109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885884-887109:-1:exon

LOC111958598
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958598
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958598
subclass of: SO_0000673
so part of: LOC111958598
location: complement(887407..887624)
location: region:887407-887624:-1
so has part: feature:887407-887624:-1:exon

position:887407:-1
position: 887407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887624:-1
position: 887624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887407-887624:-1:exon

LOC111958598
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958598
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958598
subclass of: SO_0000673
so part of: LOC111958598
location: complement(887764..888116)
location: region:887764-888116:-1
so has part: feature:887764-888116:-1:exon

position:887764:-1
position: 887764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888116:-1
position: 888116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887764-888116:-1:exon

LOC111958598
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958598
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958598
subclass of: SO_0000673
so part of: LOC111958598
location: complement(909195..909206)
location: region:909195-909206:-1
so has part: feature:909195-909206:-1:exon

position:909195:-1
position: 909195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909195-909206:-1:exon

LOC111959034
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 914163..917061
location: region:914163-917061:1
so has part: feature:914163-917061:1:exon
subclass of: SO_0000010

111959034
type: Gene
SIO_000068: ncbigene

position:914163:1
position: 914163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917061:1
position: 917061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914163-917061:1:exon

LOC111959034
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959034
product: C-X-C chemokine receptor type 3-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_023980448.1
SIO_010081: LOC111959034
subclass of: SO_0000673
so part of: LOC111959034
location: join(914163..914282,915105..917061)
location: region:914163-917061:1
so has part: feature:914163-914282:1:exon
so has part: feature:915105-917061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914163-914282:1:exon

position:914282:1
position: 914282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:915105-917061:1:exon

position:915105:1
position: 915105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 3-2-like
translation: MDHVNTTTDYYMYDSYNYSSETGSSQSSGVPCKHDGIMDFTRSYSPVVYSLVFVLALAGNILVLCVLMRYRTSQTGGTCSFSLTDTFLLHLAVSDLLLALTLPLFAVQWARQWVFGVAACKISGALFSLNRYSGILFLACISFDRYLAIVHAVSTGWKRNTCHAQIACALIWTVCLGLSGVDIAFRQVEVGGSGDHQGLLVCQTVFPHTSVQWEVGMPLVNLVLGFGLPLLVMLYCYIRIFRSLCNASRRQKRKSLHLIVCLVSMFVLCWAPYNSFQLAESLKKLGVISGGCQFGRTVDIGILVSESMGLSHCALNPLLYCFVGVKFRRELTRMCKGLLGQRFYPGMKGWGGQRRARRTTGSFSSAESENTSHFSVMA
SIO_010081: LOC111959034
subclass of: SO_0000673
so part of: LOC111959034
location: join(914250..914282,915105..916208)
location: region:914250-916208:1
so has part: feature:914250-914282:1:exon
so has part: feature:915105-916208:1:exon

XP_023836216.1
type: Protein
SIO_000068: ncbiprotein

position:914250:1
position: 914250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916208:1
position: 916208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914250-914282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:915105-916208:1:exon

LOC111958784
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 920857..921632
location: region:920857-921632:1
so has part: feature:920857-921632:1:exon
subclass of: SO_0000011

111958784
type: Gene
SIO_000068: ncbigene

position:920857:1
position: 920857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921632:1
position: 921632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920857-921632:1:exon

LOC111958784
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111958784
product: uncharacterized LOC111958784
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_002876575.1
SIO_010081: LOC111958784
subclass of: SO_0000673
so part of: LOC111958784
location: join(920857..920901,921392..921453,921580..921632)
location: region:920857-921632:1
so has part: feature:920857-920901:1:exon
so has part: feature:921392-921453:1:exon
so has part: feature:921580-921632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:920857-920901:1:exon

position:920901:1
position: 920901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:921392-921453:1:exon

position:921392:1
position: 921392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921453:1
position: 921453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:921580-921632:1:exon

position:921580:1
position: 921580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958713
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 925958..931345
location: region:925958-931345:1
so has part: feature:925958-931345:1:exon
subclass of: SO_0000010

111958713
type: Gene
SIO_000068: ncbigene

position:925958:1
position: 925958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931345:1
position: 931345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925958-931345:1:exon

LOC111958713
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958713
product: C-X-C chemokine receptor type 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023979957.1
SIO_010081: LOC111958713
subclass of: SO_0000673
so part of: LOC111958713
location: join(925958..926276,927007..927366,930104..931345)
location: region:925958-931345:1
so has part: feature:925958-926276:1:exon
so has part: feature:927007-927366:1:exon
so has part: feature:930104-931345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:925958-926276:1:exon

position:926276:1
position: 926276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927007-927366:1:exon

position:927007:1
position: 927007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927366:1
position: 927366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:930104-931345:1:exon

position:930104:1
position: 930104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958713
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 3-like
translation: MANVTHMDLDLGGIFLENSPYNYDEDYVYKEECSPEDGVGVRFGTVFLPMLYSLTLILGLVGNGLVLVVLVQRRRSWSVTDTIILHLGLADTLLLVSLPLWAVQTTGEWSFGTPLCKITGAMFTINFYCGIFLLACISLDRYMSVVHAVQMYSRRKPWMVQASCLSVWLLSILLSIPDWHFLESVRDTRRDKVECVHNYPSLSQSWFDWRLASRLLYHTVGFLLPSAVLLFCYSCILLRLQRGSQGLQKQRAVRVILALVLVFFLCWTPYNINLMVDTFQGRPGEPVSVSCENERTAVENSLVVTFALACLHACLNPVLHLGLCRNFRRHVLDMVRCVEVVQNDPKLSLWDSGVVEDSPDQAEEMGTLNPMTTMGQVQSTQS
SIO_010081: LOC111958713
subclass of: SO_0000673
so part of: LOC111958713
location: join(926265..926276,927007..927366,930104..930880)
location: region:926265-930880:1
so has part: feature:926265-926276:1:exon
so has part: feature:927007-927366:1:exon
so has part: feature:930104-930880:1:exon

XP_023835725.1
type: Protein
SIO_000068: ncbiprotein

position:926265:1
position: 926265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930880:1
position: 930880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926265-926276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927007-927366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:930104-930880:1:exon

LOC111958755
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(931986..936692)
location: region:931986-936692:-1
so has part: feature:931986-936692:-1:exon
subclass of: SO_0000010

111958755
type: Gene
SIO_000068: ncbigene

position:931986:-1
position: 931986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936692:-1
position: 936692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931986-936692:-1:exon

LOC111958755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958755
product: C-X-C chemokine receptor type 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023980007.1
SIO_010081: LOC111958755
subclass of: SO_0000673
so part of: LOC111958755
location: complement(join(931986..934259,934438..934827,936617..936692))
location: region:931986-936692:-1
so has part: feature:936617-936692:-1:exon
so has part: feature:934438-934827:-1:exon
so has part: feature:931986-934259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:936617-936692:-1:exon

position:936617:-1
position: 936617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:934438-934827:-1:exon

position:934438:-1
position: 934438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934827:-1
position: 934827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931986-934259:-1:exon

position:934259:-1
position: 934259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958755
product: C-X-C chemokine receptor type 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023980008.1
SIO_010081: LOC111958755
subclass of: SO_0000673
so part of: LOC111958755
location: complement(join(931986..934259,934438..934593,936617..936674))
location: region:931986-936674:-1
so has part: feature:936617-936674:-1:exon
so has part: feature:934438-934593:-1:exon
so has part: feature:931986-934259:-1:exon

position:936674:-1
position: 936674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936617-936674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:934438-934593:-1:exon

position:934593:-1
position: 934593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931986-934259:-1:exon

LOC111958755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 3-like isoform X2
translation: MRRRSWSVTDTFILHLGMADTLLLLTLPLWAVQAAGEWSFGTPLCKITGAMFTINFYCGIFLLACISLDRYLSVVHAVQMYSRRKPWMVQASCLSVWLLSILLSIPDWHFLESVRDTRRDKVECVHNYPSLSQSWFDWRLASRLLYHMVGFLLPSAVLLFCYSCILLRLQHGSQGLQKQRAVRVILALVLVFFLCWTPYNITLMVDTLYFSNTLVDTCESHKALDISLTTTSSLGYLHCSLNPVLYAFVGVKFRRHLLDMLRSLGCKLKSGVRLQTASRRSSMWSESGDTSHTSAIY
SIO_010081: LOC111958755
subclass of: SO_0000673
so part of: LOC111958755
location: complement(join(933525..934259,934438..934593,936617..936619))
location: region:933525-936619:-1
so has part: feature:936617-936619:-1:exon
so has part: feature:934438-934593:-1:exon
so has part: feature:933525-934259:-1:exon

XP_023835776.1
type: Protein
SIO_000068: ncbiprotein

position:933525:-1
position: 933525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936619:-1
position: 936619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936617-936619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:934438-934593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933525-934259:-1:exon

LOC111958755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 3-like isoform X1
translation: MDSLIAGGEKLTFTRVDHFSGDYDGDDNETYSDTCCSTGGVCSMEEGMRFDAVFLPIFYSLTLVLGLLGNGLVLLVLVQRRRSWSVTDTFILHLGMADTLLLLTLPLWAVQAAGEWSFGTPLCKITGAMFTINFYCGIFLLACISLDRYLSVVHAVQMYSRRKPWMVQASCLSVWLLSILLSIPDWHFLESVRDTRRDKVECVHNYPSLSQSWFDWRLASRLLYHMVGFLLPSAVLLFCYSCILLRLQHGSQGLQKQRAVRVILALVLVFFLCWTPYNITLMVDTLYFSNTLVDTCESHKALDISLTTTSSLGYLHCSLNPVLYAFVGVKFRRHLLDMLRSLGCKLKSGVRLQTASRRSSMWSESGDTSHTSAIY
SIO_010081: LOC111958755
subclass of: SO_0000673
so part of: LOC111958755
location: complement(join(933525..934259,934438..934827,936617..936619))
location: region:933525-936619:-1
so has part: feature:936617-936619:-1:exon
so has part: feature:934438-934827:-1:exon
so has part: feature:933525-934259:-1:exon

XP_023835775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:936617-936619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:934438-934827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933525-934259:-1:exon

LOC111959038
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 957921..967543
location: region:957921-967543:1
so has part: feature:957921-967543:1:exon
subclass of: SO_0000010

111959038
type: Gene
SIO_000068: ncbigene

position:957921:1
position: 957921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967543:1
position: 967543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957921-967543:1:exon

LOC111959038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959038
product: nuclear factor 7, brain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023980453.1
SIO_010081: LOC111959038
subclass of: SO_0000673
so part of: LOC111959038
location: join(957921..959736,962142..962237,962721..962951,963079..963101,963192..963310,963504..964021,967257..967543)
location: region:957921-967543:1
so has part: feature:957921-959736:1:exon
so has part: feature:962142-962237:1:exon
so has part: feature:962721-962951:1:exon
so has part: feature:963079-963101:1:exon
so has part: feature:963192-963310:1:exon
so has part: feature:963504-964021:1:exon
so has part: feature:967257-967543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957921-959736:1:exon

position:959736:1
position: 959736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:962142-962237:1:exon

position:962142:1
position: 962142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962237:1
position: 962237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:962721-962951:1:exon

position:962721:1
position: 962721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962951:1
position: 962951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:963079-963101:1:exon

position:963079:1
position: 963079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963101:1
position: 963101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:963192-963310:1:exon

position:963192:1
position: 963192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963310:1
position: 963310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:963504-964021:1:exon

position:963504:1
position: 963504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964021:1
position: 964021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:967257-967543:1:exon

position:967257:1
position: 967257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959038
product: nuclear factor 7, brain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_023980452.1
SIO_010081: LOC111959038
subclass of: SO_0000673
so part of: LOC111959038
location: join(957921..959736,962142..962237,962721..962951,963079..963101,963192..963310,963504..964625)
location: region:957921-964625:1
so has part: feature:957921-959736:1:exon
so has part: feature:962142-962237:1:exon
so has part: feature:962721-962951:1:exon
so has part: feature:963079-963101:1:exon
so has part: feature:963192-963310:1:exon
so has part: feature:963504-964625:1:exon

position:964625:1
position: 964625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957921-959736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962142-962237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962721-962951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963079-963101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963192-963310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:963504-964625:1:exon

LOC111959038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 7, brain isoform X2
translation: MAECGWDEEMSEGPSLLQEDLTCPVCKELYRGPVLLSCSHSFCKECLEKCWEGPGQKCPVCRKSCDGEQPISNRALMDATESFQKEKRWRGPNAFSNVPLCNLHRLAFQLYCVKDEEPVCVDCVPLHRAHELLPLNEGTRLCQEELTIKVNILEEKVETFKRMKNKYSNTVDFMKSQAEQAEKQIKAEFERLRQVLCVEEAARLKALADEEEDKRSRMEERISSLTSDIAALTKLVQTVKREMGAEDLTFLQNFQALKKKAQWPCEDPQNPSDALLNMAKHVGCLGYSIWKSMQAHVTCIPVVMDPNTASPWLSMSPDLASVRDSPERQSLPDNPERFDPCVFVLGAEGFRSGKHRWEVHVGDNPKWILGICKESVARKRKFTVSTDRGVWTIGLSKGVYNALTGKRTVLVVESRPERVRVKLNMDKGEVSFLDAGNGGKHLCTFTHKFTERVFPIFGPGLHTTPMEVNPAKV
SIO_010081: LOC111959038
subclass of: SO_0000673
so part of: LOC111959038
location: join(959308..959736,962142..962237,962721..962951,963079..963101,963192..963310,963504..964021,967257..967262)
location: region:959308-967262:1
so has part: feature:959308-959736:1:exon
so has part: feature:962142-962237:1:exon
so has part: feature:962721-962951:1:exon
so has part: feature:963079-963101:1:exon
so has part: feature:963192-963310:1:exon
so has part: feature:963504-964021:1:exon
so has part: feature:967257-967262:1:exon

XP_023836221.1
type: Protein
SIO_000068: ncbiprotein

position:959308:1
position: 959308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967262:1
position: 967262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959308-959736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962142-962237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962721-962951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963079-963101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963192-963310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:963504-964021:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967257-967262:1:exon

LOC111959038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc-binding protein A33 isoform X1
translation: MAECGWDEEMSEGPSLLQEDLTCPVCKELYRGPVLLSCSHSFCKECLEKCWEGPGQKCPVCRKSCDGEQPISNRALMDATESFQKEKRWRGPNAFSNVPLCNLHRLAFQLYCVKDEEPVCVDCVPLHRAHELLPLNEGTRLCQEELTIKVNILEEKVETFKRMKNKYSNTVDFMKSQAEQAEKQIKAEFERLRQVLCVEEAARLKALADEEEDKRSRMEERISSLTSDIAALTKLVQTVKREMGAEDLTFLQNFQALKKKAQWPCEDPQNPSDALLNMAKHVGCLGYSIWKSMQAHVTCIPVVMDPNTASPWLSMSPDLASVRDSPERQSLPDNPERFDPCVFVLGAEGFRSGKHRWEVHVGDNPKWILGICKESVARKRKFTVSTDRGVWTIGLSKGVYNALTGKRTVLVVESRPERVRVKLNMDKGEVSFLDAGNGGKHLCTFTHKFTERVFPIFGPGLHTTPMEVNPAKVTIHTV
SIO_010081: LOC111959038
subclass of: SO_0000673
so part of: LOC111959038
location: join(959308..959736,962142..962237,962721..962951,963079..963101,963192..963310,963504..964042)
location: region:959308-964042:1
so has part: feature:959308-959736:1:exon
so has part: feature:962142-962237:1:exon
so has part: feature:962721-962951:1:exon
so has part: feature:963079-963101:1:exon
so has part: feature:963192-963310:1:exon
so has part: feature:963504-964042:1:exon

XP_023836220.1
type: Protein
SIO_000068: ncbiprotein

position:964042:1
position: 964042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959308-959736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962142-962237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962721-962951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963079-963101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963192-963310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:963504-964042:1:exon

LOC111958599
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 970298..1011486
location: region:970298-1011486:1
so has part: feature:970298-1011486:1:exon
subclass of: SO_0000010

111958599
type: Gene
SIO_000068: ncbigene

position:970298:1
position: 970298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011486:1
position: 1011486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970298-1011486:1:exon

LOC111958599
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958599
product: multiple epidermal growth factor-like domains protein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023979863.1
SIO_010081: LOC111958599
subclass of: SO_0000673
so part of: LOC111958599
location: join(970298..970791,971885..972136,972331..972494,972775..972984,973355..973535,973958..974073,975135..975266,976207..976420,981526..981709,981994..982139,982491..982601,982700..982863,983318..983419,983564..983711,984369..984532,985563..985766,985885..986088,986244..986489,986604..986722,986840..986971,987172..987369,987609..987848,988009..988193,991135..991348,991586..991829,991947..992079,992212..992462,992626..992736,992816..992934,993103..993340,993526..993697,993979..994142,995288..995423,995516..995747,995929..996055,996140..996356,996488..996728,996838..997014,997285..997446,1000124..1000316,1000529..1000699,1001049..1001179,1007998..1008130,1008323..1011486)
location: region:970298-1011486:1
so has part: feature:970298-970791:1:exon
so has part: feature:971885-972136:1:exon
so has part: feature:972331-972494:1:exon
so has part: feature:972775-972984:1:exon
so has part: feature:973355-973535:1:exon
so has part: feature:973958-974073:1:exon
so has part: feature:975135-975266:1:exon
so has part: feature:976207-976420:1:exon
so has part: feature:981526-981709:1:exon
so has part: feature:981994-982139:1:exon
so has part: feature:982491-982601:1:exon
so has part: feature:982700-982863:1:exon
so has part: feature:983318-983419:1:exon
so has part: feature:983564-983711:1:exon
so has part: feature:984369-984532:1:exon
so has part: feature:985563-985766:1:exon
so has part: feature:985885-986088:1:exon
so has part: feature:986244-986489:1:exon
so has part: feature:986604-986722:1:exon
so has part: feature:986840-986971:1:exon
so has part: feature:987172-987369:1:exon
so has part: feature:987609-987848:1:exon
so has part: feature:988009-988193:1:exon
so has part: feature:991135-991348:1:exon
so has part: feature:991586-991829:1:exon
so has part: feature:991947-992079:1:exon
so has part: feature:992212-992462:1:exon
so has part: feature:992626-992736:1:exon
so has part: feature:992816-992934:1:exon
so has part: feature:993103-993340:1:exon
so has part: feature:993526-993697:1:exon
so has part: feature:993979-994142:1:exon
so has part: feature:995288-995423:1:exon
so has part: feature:995516-995747:1:exon
so has part: feature:995929-996055:1:exon
so has part: feature:996140-996356:1:exon
so has part: feature:996488-996728:1:exon
so has part: feature:996838-997014:1:exon
so has part: feature:997285-997446:1:exon
so has part: feature:1000124-1000316:1:exon
so has part: feature:1000529-1000699:1:exon
so has part: feature:1001049-1001179:1:exon
so has part: feature:1007998-1008130:1:exon
so has part: feature:1008323-1011486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970298-970791:1:exon

position:970791:1
position: 970791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:971885-972136:1:exon

position:971885:1
position: 971885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972136:1
position: 972136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:972331-972494:1:exon

position:972331:1
position: 972331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972494:1
position: 972494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:972775-972984:1:exon

position:972775:1
position: 972775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972984:1
position: 972984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:973355-973535:1:exon

position:973355:1
position: 973355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973535:1
position: 973535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:973958-974073:1:exon

position:973958:1
position: 973958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974073:1
position: 974073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:975135-975266:1:exon

position:975135:1
position: 975135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975266:1
position: 975266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:976207-976420:1:exon

position:976207:1
position: 976207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976420:1
position: 976420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:981526-981709:1:exon

position:981526:1
position: 981526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981709:1
position: 981709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:981994-982139:1:exon

position:981994:1
position: 981994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982139:1
position: 982139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:982491-982601:1:exon

position:982491:1
position: 982491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982601:1
position: 982601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:982700-982863:1:exon

position:982700:1
position: 982700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982863:1
position: 982863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:983318-983419:1:exon

position:983318:1
position: 983318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983419:1
position: 983419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:983564-983711:1:exon

position:983564:1
position: 983564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983711:1
position: 983711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:984369-984532:1:exon

position:984369:1
position: 984369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984532:1
position: 984532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:985563-985766:1:exon

position:985563:1
position: 985563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985766:1
position: 985766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:985885-986088:1:exon

position:985885:1
position: 985885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986088:1
position: 986088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:986244-986489:1:exon

position:986244:1
position: 986244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986489:1
position: 986489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:986604-986722:1:exon

position:986604:1
position: 986604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986722:1
position: 986722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:986840-986971:1:exon

position:986840:1
position: 986840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986971:1
position: 986971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:987172-987369:1:exon

position:987172:1
position: 987172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987369:1
position: 987369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:987609-987848:1:exon

position:987609:1
position: 987609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987848:1
position: 987848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:988009-988193:1:exon

position:988009:1
position: 988009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988193:1
position: 988193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:991135-991348:1:exon

position:991135:1
position: 991135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991348:1
position: 991348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:991586-991829:1:exon

position:991586:1
position: 991586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991829:1
position: 991829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:991947-992079:1:exon

position:991947:1
position: 991947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992079:1
position: 992079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:992212-992462:1:exon

position:992212:1
position: 992212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992462:1
position: 992462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:992626-992736:1:exon

position:992626:1
position: 992626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992736:1
position: 992736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:992816-992934:1:exon

position:992816:1
position: 992816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992934:1
position: 992934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:993103-993340:1:exon

position:993103:1
position: 993103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993340:1
position: 993340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:993526-993697:1:exon

position:993526:1
position: 993526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993697:1
position: 993697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:993979-994142:1:exon

position:993979:1
position: 993979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994142:1
position: 994142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:995288-995423:1:exon

position:995288:1
position: 995288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995423:1
position: 995423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:995516-995747:1:exon

position:995516:1
position: 995516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995747:1
position: 995747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:995929-996055:1:exon

position:995929:1
position: 995929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996055:1
position: 996055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:996140-996356:1:exon

position:996140:1
position: 996140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996356:1
position: 996356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:996488-996728:1:exon

position:996488:1
position: 996488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996728:1
position: 996728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:996838-997014:1:exon

position:996838:1
position: 996838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997014:1
position: 997014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:997285-997446:1:exon

position:997285:1
position: 997285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997446:1
position: 997446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1000124-1000316:1:exon

position:1000124:1
position: 1000124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000316:1
position: 1000316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1000529-1000699:1:exon

position:1000529:1
position: 1000529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000699:1
position: 1000699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1001049-1001179:1:exon

position:1001049:1
position: 1001049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001179:1
position: 1001179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1007998-1008130:1:exon

position:1007998:1
position: 1007998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008130:1
position: 1008130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1008323-1011486:1:exon

position:1008323:1
position: 1008323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958599
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958599
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1008935..1008937,aa:OTHER)
product: LOW QUALITY PROTEIN: multiple epidermal growth factor-like domains protein 8
translation: MASLLHVPLLGLLLVAVAPGCWAGDCKGHRQVLRGPPGYITDGPGNYSVNGNCEWLIKAPSSNYRIVLNFTFMETECTYDYLFVYDGDSYQNPLLASLSGTTLPQPIEAKSGKMLLHLFSDANYNLLGFNATYSFSVCPGACGGHGRCDTASSLCQCHLGWGGADCSTPLCPQACILHGTCDKRGERCLCSSDFLGQSCQLGLRDDSGAGQWWQVSGGDPYTPPRTGSAGVYLSSTGAMYLFGGFDLNRALGDLVKYNFSLNQWENRSYGHSPVSACTHARNWLTGSVWLVLFDISGFDLNRALGDLVKYNFSLNQWENRSYGHSPAARHSHTAVEWKGNMVIFGGELASGALASDVWMYRPIQDDWQQLGQSHSPGAPRVANHAAAVVDNYLYIFGGRTEEDMFSSSLYRFGLRGSGVWEAVQPTGGKPPATAGHSMVFHPPSRVLLVYGGHRPTTARFSVRVNSTDVFHVDRRFWTSFRSRFPATGPRERAFHSATIIGNYMVVYGGNVHIHYQEEKCYDEEIFFYHLGCHQWVSAGESLQHRVEAVRGRYSHVAAVMEGRVLLVAGGYSGIARGDLVAYKVPLFVSSDPGDRVSQEDAVCAEAPDESMCLKNPECSWCEGRCREYQPTNPCGSTGCLGLARFLSDCQSCLVFSGAPGSLPRAPGDFGWCVQNESCLPVSDQSACRVDQISGAYGWWGERTRFLATILSCRTENYVPGLHLLTFQHPRNDSQPDKVSILRSTSIILSPTTEMDVTLQFRGFIHPLWGAPPPAPPPTETISMWARIQRLHFEARMAAGPNSLQLNERVGRWAAHQEKETKLLSRPDMGRLFPNLTRGNRYLVQAEGYLNNSGSGQTSEMALTWNRTALPGGSEISFLFLEPYRSGSCSGYQSCLACLSDQSCGWCXSLGRCLFRALPDLEPCPEDQGGGERHLLLAPPQCTLCEEYRDCSACTQDHYCEWQINSSKKGDYQCSRRGRLDGSIRDPEGCPKVCNQRRTCGECLSNSSQCAWCESAQACFYFAAYLTKYPYGECRDWYDSVHSVPQCKQCSALVTCTDCLQTFQCGWCGDYNNPTIGRCLRGDWGGMDDPSVYNCSVAVDEVRATSPESQTLAPPRPMEMEMELEHLEEGERDPVWSYPSCPDVEECRLGLHSCHPFATCVNTPTSFECHCERGYTGDGTLHCNQTCYNECRQGQCSGSPRFECECSLGWTSDPATLVLSGVECDVDCGCNFHSTCITAPGICDHCQDWTMGLQCEHCRPGSFGSALAGGGGCVPCQCNGHGGPLLGXCHKQTGQCYCTHHTQGPHCESCLPGYYGDPRNNGTCFRQCQGRSVILSHQSPLSELPISSSLGWRGGVGGKGGLSHCLWVLSVSENLAPCVPGELCPPVALTLHPDSYTQCTSSYVYVFDGLPRFLSNGVVHSDHNLIGAFCGTTRTQPITVEATSGVISVYFEANVSSDRPQGFNASFWVRRCRQGSEAGEDGSPVCQGGAQCSGGLCQCTQGYGGPYCDRPLCPEGCGLAEGRGSCNLSLGVCVCADGWGGSDCSTPLDSSSLVWETLLDTQLTANQAHRFLHRMGHSLVSGPQGNLWMYGGLSLSEGILGNVYRYSVLERRWTQMLTSSVEEGSTPSPRYHHASALLASHEPLSDAQGATHNLMLVVGGVTQKGVAMDTWSLNLSSLVWRQHKSSVLPPVAGHTLTVRRDSSMLLIGGYSPEXGFNHHLLEFNIHSGNWTXAPHTGTPPTGLYGHSAVYHEQTDAVYVFGGYRFHVETVEPSGELYSLYYANLAWSLLVPSQGNKPLSRFFHAAALIKDTMVIVGGRTGVEDYSNTVSLYQINCNTWIQPDSAVGEPVNRSVSLAMVGWGGRLFLSGGFNGVTLGRLLTLTLPSDPCTLLPTPEACNTTTGSCVWCRGTCAASDTAERLGCSIGQSPCSPTPRLPDQCRRLKTCSECLARHPRTFSSPSQSQSALQCKWCTNCPEGACISSTVSCTSEHDCRINQREIFL…
SIO_010081: LOC111958599
subclass of: SO_0000673
so part of: LOC111958599
location: join(971962..972136,972331..972494,972775..972984,973355..973535,973958..974073,975135..975266,976207..976420,981526..981709,981994..982139,982491..982601,982700..982863,983318..983419,983564..983711,984369..984532,985563..985766,985885..986088,986244..986489,986604..986722,986840..986971,987172..987369,987609..987848,988009..988193,991135..991348,991586..991829,991947..992079,992212..992462,992626..992736,992816..992934,993103..993340,993526..993697,993979..994142,995288..995423,995516..995747,995929..996055,996140..996356,996488..996728,996838..997014,997285..997446,1000124..1000316,1000529..1000699,1001049..1001179,1007998..1008130,1008323..1009819)
location: region:971962-1009819:1
so has part: feature:971962-972136:1:exon
so has part: feature:972331-972494:1:exon
so has part: feature:972775-972984:1:exon
so has part: feature:973355-973535:1:exon
so has part: feature:973958-974073:1:exon
so has part: feature:975135-975266:1:exon
so has part: feature:976207-976420:1:exon
so has part: feature:981526-981709:1:exon
so has part: feature:981994-982139:1:exon
so has part: feature:982491-982601:1:exon
so has part: feature:982700-982863:1:exon
so has part: feature:983318-983419:1:exon
so has part: feature:983564-983711:1:exon
so has part: feature:984369-984532:1:exon
so has part: feature:985563-985766:1:exon
so has part: feature:985885-986088:1:exon
so has part: feature:986244-986489:1:exon
so has part: feature:986604-986722:1:exon
so has part: feature:986840-986971:1:exon
so has part: feature:987172-987369:1:exon
so has part: feature:987609-987848:1:exon
so has part: feature:988009-988193:1:exon
so has part: feature:991135-991348:1:exon
so has part: feature:991586-991829:1:exon
so has part: feature:991947-992079:1:exon
so has part: feature:992212-992462:1:exon
so has part: feature:992626-992736:1:exon
so has part: feature:992816-992934:1:exon
so has part: feature:993103-993340:1:exon
so has part: feature:993526-993697:1:exon
so has part: feature:993979-994142:1:exon
so has part: feature:995288-995423:1:exon
so has part: feature:995516-995747:1:exon
so has part: feature:995929-996055:1:exon
so has part: feature:996140-996356:1:exon
so has part: feature:996488-996728:1:exon
so has part: feature:996838-997014:1:exon
so has part: feature:997285-997446:1:exon
so has part: feature:1000124-1000316:1:exon
so has part: feature:1000529-1000699:1:exon
so has part: feature:1001049-1001179:1:exon
so has part: feature:1007998-1008130:1:exon
so has part: feature:1008323-1009819:1:exon

XP_023835631.1
type: Protein
SIO_000068: ncbiprotein

position:971962:1
position: 971962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009819:1
position: 1009819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:971962-972136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972331-972494:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972775-972984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:973355-973535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973958-974073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975135-975266:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976207-976420:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:981526-981709:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:981994-982139:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:982491-982601:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:982700-982863:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:983318-983419:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:983564-983711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:984369-984532:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:985563-985766:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985885-986088:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:986244-986489:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:986604-986722:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:986840-986971:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:987172-987369:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:987609-987848:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:988009-988193:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:991135-991348:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:991586-991829:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:991947-992079:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:992212-992462:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:992626-992736:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:992816-992934:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:993103-993340:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:993526-993697:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:993979-994142:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:995288-995423:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:995516-995747:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:995929-996055:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:996140-996356:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:996488-996728:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:996838-997014:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:997285-997446:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1000124-1000316:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1000529-1000699:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1001049-1001179:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1007998-1008130:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1008323-1009819:1:exon

LOC112067948
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1017229..1020505
location: region:1017229-1020505:1
so has part: feature:1017229-1020505:1:exon

112067948
type: Gene
SIO_000068: ncbigene

position:1017229:1
position: 1017229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020505:1
position: 1020505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017229-1020505:1:exon

LOC112067948
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067948
subclass of: SO_0000673
so part of: LOC112067948
location: 1017229..1017307
location: region:1017229-1017307:1
so has part: feature:1017229-1017307:1:exon

position:1017307:1
position: 1017307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017229-1017307:1:exon

LOC112067948
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067948
subclass of: SO_0000673
so part of: LOC112067948
location: 1018553..1018653
location: region:1018553-1018653:1
so has part: feature:1018553-1018653:1:exon

position:1018553:1
position: 1018553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018653:1
position: 1018653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018553-1018653:1:exon

LOC112067948
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067948
subclass of: SO_0000673
so part of: LOC112067948
location: 1018754..1018838
location: region:1018754-1018838:1
so has part: feature:1018754-1018838:1:exon

position:1018754:1
position: 1018754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018838:1
position: 1018838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018754-1018838:1:exon

LOC112067948
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067948
subclass of: SO_0000673
so part of: LOC112067948
location: 1019026..1020505
location: region:1019026-1020505:1
so has part: feature:1019026-1020505:1:exon

position:1019026:1
position: 1019026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019026-1020505:1:exon

LOC111958600
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1023989..1070508
location: region:1023989-1070508:1
so has part: feature:1023989-1070508:1:exon
subclass of: SO_0000010

111958600
type: Gene
SIO_000068: ncbigene

position:1023989:1
position: 1023989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070508:1
position: 1070508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023989-1070508:1:exon

LOC111958600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958600
product: zinc finger protein Xfin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024134875.1
SIO_010081: LOC111958600
subclass of: SO_0000673
so part of: LOC111958600
location: join(1023989..1024087,1024522..1024828,1024933..1025020,1045022..1045401,1045509..1045584,1045828..1047207,1063797..1064026,1067338..1067836,1068251..1070508)
location: region:1023989-1070508:1
so has part: feature:1023989-1024087:1:exon
so has part: feature:1024522-1024828:1:exon
so has part: feature:1024933-1025020:1:exon
so has part: feature:1045022-1045401:1:exon
so has part: feature:1045509-1045584:1:exon
so has part: feature:1045828-1047207:1:exon
so has part: feature:1063797-1064026:1:exon
so has part: feature:1067338-1067836:1:exon
so has part: feature:1068251-1070508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023989-1024087:1:exon

position:1024087:1
position: 1024087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1024522-1024828:1:exon

position:1024522:1
position: 1024522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024828:1
position: 1024828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1024933-1025020:1:exon

position:1024933:1
position: 1024933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025020:1
position: 1025020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1045022-1045401:1:exon

position:1045022:1
position: 1045022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045401:1
position: 1045401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1045509-1045584:1:exon

position:1045509:1
position: 1045509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045584:1
position: 1045584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1045828-1047207:1:exon

position:1045828:1
position: 1045828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047207:1
position: 1047207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1063797-1064026:1:exon

position:1063797:1
position: 1063797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064026:1
position: 1064026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1067338-1067836:1:exon

position:1067338:1
position: 1067338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067836:1
position: 1067836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1068251-1070508:1:exon

position:1068251:1
position: 1068251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112067949
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1026305..1031530
location: region:1026305-1031530:1
so has part: feature:1026305-1031530:1:exon
subclass of: SO_0000010

112067949
type: Gene
SIO_000068: ncbigene

position:1026305:1
position: 1026305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031530:1
position: 1031530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026305-1031530:1:exon

LOC112067949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC112067949
product: gastrula zinc finger protein XlCGF7.1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_024134873.1
SIO_010081: LOC112067949
subclass of: SO_0000673
so part of: LOC112067949
location: join(1026305..1026872,1027209..1027384,1031486..1031530)
location: region:1026305-1031530:1
so has part: feature:1026305-1026872:1:exon
so has part: feature:1027209-1027384:1:exon
so has part: feature:1031486-1031530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026305-1026872:1:exon

position:1026872:1
position: 1026872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1027209-1027384:1:exon

position:1027209:1
position: 1027209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027384:1
position: 1027384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1031486-1031530:1:exon

position:1031486:1
position: 1031486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112067949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC112067949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF7.1-like
translation: MFHTPRQLDIHTRQAHPSARPRKPSHPRRVPGKLHPCPQCARRFPYLGTLLKHCKNLHKMAVVRIDGHLSCAECGKSFENCWGLGPHRCHEPEGTKLKDTKPVICLEVGFHCSECGKILTTPTSLNTHMRIHTGEKPYECKECGKRFSNGSSLGKHLLIHKGVKEFKCQDCGKAFAQANLLRNHMTVHSGEKPYTCTECGKSFTQSGDLAKHKRHHTGERPFECSECHSRFICSGSLTLHMRTHTHRDNSNEEALKMKSKPG
SIO_010081: LOC112067949
subclass of: SO_0000673
so part of: LOC112067949
location: join(1026305..1026872,1027209..1027384,1031486..1031530)
location: region:1026305-1031530:1
so has part: feature:1026305-1026872:1:exon
so has part: feature:1027209-1027384:1:exon
so has part: feature:1031486-1031530:1:exon

XP_023990641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1026305-1026872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1027209-1027384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031486-1031530:1:exon

LOC111958795
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1029729..1037632
location: region:1029729-1037632:1
so has part: feature:1029729-1037632:1:exon
subclass of: SO_0000010

111958795
type: Gene
SIO_000068: ncbigene

position:1029729:1
position: 1029729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037632:1
position: 1037632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029729-1037632:1:exon

LOC111958795
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958795
product: uncharacterized LOC111958795
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024134874.1
SIO_010081: LOC111958795
subclass of: SO_0000673
so part of: LOC111958795
location: join(1029729..1029770,1031486..1031857,1031965..1032040,1032284..1032522,1037513..1037632)
location: region:1029729-1037632:1
so has part: feature:1029729-1029770:1:exon
so has part: feature:1031486-1031857:1:exon
so has part: feature:1031965-1032040:1:exon
so has part: feature:1032284-1032522:1:exon
so has part: feature:1037513-1037632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1029729-1029770:1:exon

position:1029770:1
position: 1029770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031486-1031857:1:exon

position:1031857:1
position: 1031857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1031965-1032040:1:exon

position:1031965:1
position: 1031965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032040:1
position: 1032040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1032284-1032522:1:exon

position:1032284:1
position: 1032284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032522:1
position: 1032522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1037513-1037632:1:exon

position:1037513:1
position: 1037513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111958795
translation: MSKHHRDPIKTECGTQSDDVYCNREEPDISQSPYITKGVCISSIQIKEEPTDFEQQGMGEEPNRSVPSFQKKHIKHQNTSNPMTGCSKISLSPVVTLTRLSNVVVKTLLRDTKVCLVKEENSDETDGVSTSQFFPCPHCTISFTDCYFLENHIKTKHQKQYVAMLKSHVSTSKTVYAPTHSCPHCSCMFHTPRQLHVHTGWGSLICAAARNTRPGPRVCWGCGQPGHLRRDCPMSSSAQGNGSGSA
SIO_010081: LOC111958795
subclass of: SO_0000673
so part of: LOC111958795
location: join(1031552..1031857,1031965..1032040,1032284..1032522,1037513..1037632)
location: region:1031552-1037632:1
so has part: feature:1031552-1031857:1:exon
so has part: feature:1031965-1032040:1:exon
so has part: feature:1032284-1032522:1:exon
so has part: feature:1037513-1037632:1:exon

XP_023990642.1
type: Protein
SIO_000068: ncbiprotein

position:1031552:1
position: 1031552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031552-1031857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1031965-1032040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1032284-1032522:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037513-1037632:1:exon

LOC111958600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Xfin-like
translation: MKNKPGKKQHNKTKRTKHHRDPIKTECGTQSDDVYCNREEPDISQSPYITKGVCISSIQIKEEPTDFEQQGMGEEPNRSVPSFQKKHIKHQNTSNPMXGCSKISXSPVVTLTRLSNVVVKTLLRDTNVCLVKEENSDETDGVSSPQFFSCPHCTISFTDCYFLENHMKTKHQKQYVAMLKSHVSTSKTVYAPTHSCPHCSCMFHTPRQLHVHICQAHPSPSLRKLHPCPYCDRSFQYIARLHTHCKVWHKMAVTFIDGYLSCADCGKSFKNCWGLGPHQCYKPEDTKPEDGPVCVNIGMPCSECGKSCSSPQNLRIHMRTHXGEKPYVCKECGKSFSEASSHCKHMMIHSGVKPFKCQDCGKDFARMWHLRVHMTVHSGEKPLSCPKCDRRFAYSYSLKLHLRTHSGERPFKCTVCGKDFADKGYLKTHLKIHNNERNYHCGVCGLKFINSAALKTHQRTHTGERPFHCTVCDKTFFRHEHLKNHQRTHTGERPYVCSECSKSFAQSGDLTKHIRTHTGEKPYECSVCHGCYTSSGDXGKHMRIHNNSRPYHCQECDKSFRMVGHLKTHMRTHTGERPYSCHRCHRTFARAHHLSGHLPRCFATIGATSAGVESRFSRLKRLKSYTRNTMGQERLKNLAILSIERRILKSLQKNPHWYERVIDQFANQTMRRMDFIFKCEGVDLSRDTLVNKMKNKSVKKQHKIKRSKHHRDPIKTECETQSDDVNCKREEPDISQSPSPNTKGVTSNSIQIKEEPADFEVQSHCFDSRALHKDSGTVITKTETDSVYISQGTVEIKAEYDSDSEIHKVVVKRETQVCFMKEENVGEEDTDEDPEDGRDTDSNRVSSPQFFPCTYCTISFTDHSFLEKHIKWNHQKEYLAMLRNSFTKSSGTETVPTHSCLHCSLMFQTPRLLSIHTRQIHPSATPRKPARPHRVSVKLYTCPQCARRFRYLGSLQNHCELSHKMAVISTNGHLSCADCGKSFKNCWGLGPHXCHXPEGTEPQDIKPVVCLXVGFHCSECGKILCSPQSLNIHMRIHTGEKPYACKECGKRFAESGSLRKHLLIHSGVKAFKCQECGKDFARMKGLRSQMTTHSGKKQYSCSHCDRQFGYKSSLTIHLRSHTGEKPFHCTECGKDFSIKRNLRLHLKIHNNEKGHQCGECGLKVIDIGALKTHMRSHTGERPYHCTVCSKQFIRLEHLKNHQRTHTGERPYVCSECSKSFAQSGDLTKHIRTHTGEKPYECSVCHGCYTSSGDLGKHMRIHNGSRPFPCQQCDKSFRLVGHLKTHMRTHTGERPYSCPRCLRTFARTHHLSVHVAQCR
SIO_010081: LOC111958600
subclass of: SO_0000673
so part of: LOC111958600
location: join(1045054..1045401,1045509..1045584,1045828..1047207,1063797..1064026,1067338..1067836,1068251..1069674)
location: region:1045054-1069674:1
so has part: feature:1045054-1045401:1:exon
so has part: feature:1045509-1045584:1:exon
so has part: feature:1045828-1047207:1:exon
so has part: feature:1063797-1064026:1:exon
so has part: feature:1067338-1067836:1:exon
so has part: feature:1068251-1069674:1:exon

XP_023990643.1
type: Protein
SIO_000068: ncbiprotein

position:1045054:1
position: 1045054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069674:1
position: 1069674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045054-1045401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045509-1045584:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045828-1047207:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063797-1064026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1067338-1067836:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1068251-1069674:1:exon

LOC111958794
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1048075..1064733
location: region:1048075-1064733:1
so has part: feature:1048075-1064733:1:exon
subclass of: SO_0000010

111958794
type: Gene
SIO_000068: ncbigene

position:1048075:1
position: 1048075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064733:1
position: 1064733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048075-1064733:1:exon

LOC111958794
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958794
product: zinc finger MYM-type protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_023980068.1
SIO_010081: LOC111958794
subclass of: SO_0000673
so part of: LOC111958794
location: join(1048075..1048328,1061364..1064026,1064165..1064733)
location: region:1048075-1064733:1
so has part: feature:1048075-1048328:1:exon
so has part: feature:1061364-1064026:1:exon
so has part: feature:1064165-1064733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048075-1048328:1:exon

position:1048328:1
position: 1048328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061364-1064026:1:exon

position:1061364:1
position: 1061364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1064165-1064733:1:exon

position:1064165:1
position: 1064165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958794
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 1
translation: MTRSHRDHIKTDCETQSDDVDSSREDSDIGQAHSLSSNGFTFNIIQIKEEETDFEVHETSEEHNGIRSNCHLDSRALHQDSGTIKTKTETDSVYISQGTTEIKTEHDSEIRVVKTEMKVYAPSHSCPHCSCMFHTPQQLLVHTCQVANSDNIVDFLLKTPFHSLESTERVRIKTEGRPLPEIKYIRKDDKVRRAFNTNWYKKYQWLTGSLSSSRLYCWPCLLFGTFEPWAKGGFSDLKNIDRSAKRHDESREHLNSYAKLKLLGQPSHRANHSLNEGLRIQAAQHNEKVRRNRDVLKRLIDSIAYLGMQELAFRGHDETESSANKGNYRELAEVIARYDALLAQHMESSTVFTGMSRTIQNDLITAIASSIRSEIKSEVDAAPFFSWQMDETTDHSQLSVIVRYVDDRGCVQERFLGYFDVSAGRDAQSVFDLVNSEMSEFNFVEKLVAQTYDGAAVMASDLNSLQAKVRAVAPSATFVHCYAHPLNSVLSQSVKSMPKTKVFFATLGGFATFFCKSTNRMLLEKAACASLPKNAPTHWNFTSRVVNTVAKNFEHLLDTFTSITEHPKMDDDTIFDANGFKTQLEDFHFIFLLLTFEYIFACTDVVFDSVQQNAMDVEFCKRRIENXJLKIEEHKSEEEFSAIYQKASNMTDDPELXHRRKXRQXTQDVXQTYKSLYDSIHDNIKTQIAQRFQSLDSRRYMELLDDEKFESFRSEFPTNAMESLSQGYGRFFNMEKLKNELQVFYCGEELQGNSRKLCDRILHFKGCGLNEVMPEVYRLMCLVATIGATSAGVESRFSRLKRLKSYTRNTMGQERLKNLAILSIERRILKSLQKNPHWYERVIDQFANQTMRRMDFIFK
SIO_010081: LOC111958794
subclass of: SO_0000673
so part of: LOC111958794
location: join(1061450..1064026,1064165..1064167)
location: region:1061450-1064167:1
so has part: feature:1061450-1064026:1:exon
so has part: feature:1064165-1064167:1:exon

XP_023835836.1
type: Protein
SIO_000068: ncbiprotein

position:1061450:1
position: 1061450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064167:1
position: 1064167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061450-1064026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064165-1064167:1:exon

LOC111958719
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1100824..1104676
location: region:1100824-1104676:1
so has part: feature:1100824-1104676:1:exon
subclass of: SO_0000010

111958719
type: Gene
SIO_000068: ncbigene

position:1100824:1
position: 1100824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104676:1
position: 1104676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100824-1104676:1:exon

LOC111958719
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958719
product: B-cell antigen receptor complex-associated protein alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_023979963.1
SIO_010081: LOC111958719
subclass of: SO_0000673
so part of: LOC111958719
location: join(1100824..1101045,1102476..1102838,1103601..1103716,1103948..1104010,1104151..1104676)
location: region:1100824-1104676:1
so has part: feature:1100824-1101045:1:exon
so has part: feature:1102476-1102838:1:exon
so has part: feature:1103601-1103716:1:exon
so has part: feature:1103948-1104010:1:exon
so has part: feature:1104151-1104676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1100824-1101045:1:exon

position:1101045:1
position: 1101045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1102476-1102838:1:exon

position:1102476:1
position: 1102476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102838:1
position: 1102838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1103601-1103716:1:exon

position:1103601:1
position: 1103601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103716:1
position: 1103716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1103948-1104010:1:exon

position:1103948:1
position: 1103948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104010:1
position: 1104010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1104151-1104676:1:exon

position:1104151:1
position: 1104151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958719
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958719
product: B-cell antigen receptor complex-associated protein alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023979964.1
SIO_010081: LOC111958719
subclass of: SO_0000673
so part of: LOC111958719
location: join(1100824..1101045,1102473..1102838,1103601..1103711,1103948..1104010,1104151..1104243)
location: region:1100824-1104243:1
so has part: feature:1100824-1101045:1:exon
so has part: feature:1102473-1102838:1:exon
so has part: feature:1103601-1103711:1:exon
so has part: feature:1103948-1104010:1:exon
so has part: feature:1104151-1104243:1:exon

position:1104243:1
position: 1104243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100824-1101045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102473-1102838:1:exon

position:1102473:1
position: 1102473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1103601-1103711:1:exon

position:1103711:1
position: 1103711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1103948-1104010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104151-1104243:1:exon

LOC111958719
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958719
product: B-cell antigen receptor complex-associated protein alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_023979962.1
SIO_010081: LOC111958719
subclass of: SO_0000673
so part of: LOC111958719
location: join(1100826..1101045,1102473..1102838,1103601..1103716,1103948..1104010,1104151..1104676)
location: region:1100826-1104676:1
so has part: feature:1100826-1101045:1:exon
so has part: feature:1102473-1102838:1:exon
so has part: feature:1103601-1103716:1:exon
so has part: feature:1103948-1104010:1:exon
so has part: feature:1104151-1104676:1:exon

position:1100826:1
position: 1100826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100826-1101045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102473-1102838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103601-1103716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103948-1104010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104151-1104676:1:exon

LOC111958719
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell antigen receptor complex-associated protein alpha chain-like isoform X1
translation: MVAVTFLFLCFWAAGVHGDLSRIQVTLEPDRPSLRVQLSHTAHLRCCYSATRGAVETTWYISIQTVNGTSALQGVDRRDNRVTVDEGNLTAAGVMCHTLILKEARLNDSGLYQCFLNHSALRHSVYTHGTFLQVYRPMVKILDIGESTKNSILTAEGMLLMVAVLLHGTMMLCKTKKLNQMKKKRVKKEEENIYEGLNLEECCSTYDQIQRSLVQGPYQDVGNMIMEEEIQLEKP
SIO_010081: LOC111958719
subclass of: SO_0000673
so part of: LOC111958719
location: join(1101006..1101045,1102473..1102838,1103601..1103716,1103948..1104010,1104151..1104273)
location: region:1101006-1104273:1
so has part: feature:1101006-1101045:1:exon
so has part: feature:1102473-1102838:1:exon
so has part: feature:1103601-1103716:1:exon
so has part: feature:1103948-1104010:1:exon
so has part: feature:1104151-1104273:1:exon

XP_023835730.1
type: Protein
SIO_000068: ncbiprotein

position:1101006:1
position: 1101006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104273:1
position: 1104273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101006-1101045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102473-1102838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103601-1103716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103948-1104010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104151-1104273:1:exon

LOC111958719
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell antigen receptor complex-associated protein alpha chain-like isoform X2
translation: MVAVTFLFLCFWAGVHGDLSRIQVTLEPDRPSLRVQLSHTAHLRCCYSATRGAVETTWYISIQTVNGTSALQGVDRRDNRVTVDEGNLTAAGVMCHTLILKEARLNDSGLYQCFLNHSALRHSVYTHGTFLQVYRPMVKILDIGESTKNSILTAEGMLLMVAVLLHGTMMLCKTKKLNQMKKKRVKKEEENIYEGLNLEECCSTYDQIQRSLVQGPYQDVGNMIMEEEIQLEKP
SIO_010081: LOC111958719
subclass of: SO_0000673
so part of: LOC111958719
location: join(1101006..1101045,1102476..1102838,1103601..1103716,1103948..1104010,1104151..1104273)
location: region:1101006-1104273:1
so has part: feature:1101006-1101045:1:exon
so has part: feature:1102476-1102838:1:exon
so has part: feature:1103601-1103716:1:exon
so has part: feature:1103948-1104010:1:exon
so has part: feature:1104151-1104273:1:exon

XP_023835731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1101006-1101045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102476-1102838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103601-1103716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103948-1104010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104151-1104273:1:exon

LOC111958719
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell antigen receptor complex-associated protein alpha chain-like isoform X3
translation: MVAVTFLFLCFWAAGVHGDLSRIQVTLEPDRPSLRVQLSHTAHLRCCYSATRGAVETTWYISIQTVNGTSALQGVDRRDNRVTVDEGNLTAAGVMCHTLILKEARLNDSGLYQCFLNHSALRHSVYTHGTFLQVYRPMVKILDIGESTKNSILTAEGMLLMVAVLLHGTMMLYEETQSNEEEKGQKGRGEYL
SIO_010081: LOC111958719
subclass of: SO_0000673
so part of: LOC111958719
location: join(1101006..1101045,1102473..1102838,1103601..1103711,1103948..1104009)
location: region:1101006-1104009:1
so has part: feature:1101006-1101045:1:exon
so has part: feature:1102473-1102838:1:exon
so has part: feature:1103601-1103711:1:exon
so has part: feature:1103948-1104009:1:exon

XP_023835732.1
type: Protein
SIO_000068: ncbiprotein

position:1104009:1
position: 1104009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101006-1101045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102473-1102838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103601-1103711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103948-1104009:1:exon

LOC111958912
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1105356..1149841
location: region:1105356-1149841:1
so has part: feature:1105356-1149841:1:exon
subclass of: SO_0000010

111958912
type: Gene
SIO_000068: ncbigene

position:1105356:1
position: 1105356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149841:1
position: 1149841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105356-1149841:1:exon

LOC111958912
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958912
product: hormone-sensitive lipase
inference: similar to RNA sequence (same species):INSD:GGAP01011785.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 11 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023980255.1
SIO_010081: LOC111958912
subclass of: SO_0000673
so part of: LOC111958912
location: join(1105356..1105454,1126328..1126569,1127220..1127504,1127625..1127715,1128742..1128887,1129359..1129544,1131670..1131822,1133667..1133811,1136341..1136568,1136695..1136853,1137905..1138131,1141624..>1141880,<1147098..1149841)
location: region:1105356-1149841:1
so has part: feature:1105356-1105454:1:exon
so has part: feature:1126328-1126569:1:exon
so has part: feature:1127220-1127504:1:exon
so has part: feature:1127625-1127715:1:exon
so has part: feature:1128742-1128887:1:exon
so has part: feature:1129359-1129544:1:exon
so has part: feature:1131670-1131822:1:exon
so has part: feature:1133667-1133811:1:exon
so has part: feature:1136341-1136568:1:exon
so has part: feature:1136695-1136853:1:exon
so has part: feature:1137905-1138131:1:exon
so has part: feature:1141624-1141880:1:exon
so has part: feature:1147098-1149841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105356-1105454:1:exon

position:1105454:1
position: 1105454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1126328-1126569:1:exon

position:1126328:1
position: 1126328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126569:1
position: 1126569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1127220-1127504:1:exon

position:1127220:1
position: 1127220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127504:1
position: 1127504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1127625-1127715:1:exon

position:1127625:1
position: 1127625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127715:1
position: 1127715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1128742-1128887:1:exon

position:1128742:1
position: 1128742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128887:1
position: 1128887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1129359-1129544:1:exon

position:1129359:1
position: 1129359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129544:1
position: 1129544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1131670-1131822:1:exon

position:1131670:1
position: 1131670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131822:1
position: 1131822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1133667-1133811:1:exon

position:1133667:1
position: 1133667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133811:1
position: 1133811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1136341-1136568:1:exon

position:1136341:1
position: 1136341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136568:1
position: 1136568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1136695-1136853:1:exon

position:1136695:1
position: 1136695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136853:1
position: 1136853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1137905-1138131:1:exon

position:1137905:1
position: 1137905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138131:1
position: 1138131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1141624-1141880:1:exon

position:1141624:1
position: 1141624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141880:1
position: 1141880
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1147098-1149841:1:exon

position:1147098:1
position: 1147098
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

LOC111958912
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958912
inference: similar to RNA sequence (same species):INSD:GGAP01011785.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 11 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hormone-sensitive lipase
translation: MASGKKGGNSSLEKGLNGRRSSKHKEGPIVMDTKAVFTALYSVCEENATFFSEGAKGAQGGAAQRLVDTMTLIQEHARSLEPVISGFAAIYHHFDFDPHIPANGYRSLVKVVRCCILHIIHKGRYISTNRRSIFFRTAHNAGEMEAYCSALCQLRALLYLAQRLLHDNSHGNLFFHEESGLSQSFIREYSSMHKGCFYGRCLGFQFTPAIRPCLQTIAIGLVAFGENYRRHQSGIGVAASSFFTSGKYAIDPELRGAEFERITQNLDVHFWKAFWNITETEVLSSLASMTSTQVKVNRALSVPPVPFDLPLVADPHLTVTIXAPSAHTGPGPVQMRLISFELREGQDSEALLSLSRSEGGPISLSLGMKTKQSPASRWLLVHYHGGGFVAQTSKSHEPYLKSWSQDLGVPILSVDYSLAPEAPFPRALEDCFYAYCWAIKNHQLLGWTGENVCLAGDSAGGNLCITTSMRAASHGVRMPDGIVAAYPAILLTAYASPSRLLTLFDPLLPLSVLSRCLSAYAGEEPQAEKQVEKVSTLSMVRRDTALLLRDFKQGASNWIHSLLDPNRAAAMASTDTSSSVRKSVSEASISSPHSDPPVPPEHPFDFSLRRESLKSHTCQDLAGHTNNANSTPAAAPTTPAHNAMVFPKPTPDNVSFFLSKEEVVSMSDALSSVAIAPPEGEEGVVLEHPREFPLGFEPLRSERLAEMKLATSPVVRNPYMSPLLAPDSMLRGLPPIHLVACALDPMLDDSVMFAKRLRNVDQPVTLCVVDDLPHGFLSLSQLSRETREAANVCVNRIRDVFDQKDSPQEPRMHRKLERTNRRASSVATGDPEKLFAAPIQEEELLVARGGALVPDGAGLVGLAAQNNIDIVG
SIO_010081: LOC111958912
subclass of: SO_0000673
so part of: LOC111958912
location: join(1105367..1105454,1126328..1126569,1127220..1127504,1127625..1127715,1128742..1128887,1129359..1129544,1131670..1131822,1133667..1133811,1136341..1136568,1136695..1136853,1137905..1138131,1141624..>1141880,<1147098..1147498)
location: region:1105367-1147498:1
so has part: feature:1105367-1105454:1:exon
so has part: feature:1126328-1126569:1:exon
so has part: feature:1127220-1127504:1:exon
so has part: feature:1127625-1127715:1:exon
so has part: feature:1128742-1128887:1:exon
so has part: feature:1129359-1129544:1:exon
so has part: feature:1131670-1131822:1:exon
so has part: feature:1133667-1133811:1:exon
so has part: feature:1136341-1136568:1:exon
so has part: feature:1136695-1136853:1:exon
so has part: feature:1137905-1138131:1:exon
so has part: feature:1141624-1141880:1:exon
so has part: feature:1147098-1147498:1:exon

XP_023836023.1
type: Protein
SIO_000068: ncbiprotein

position:1105367:1
position: 1105367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147498:1
position: 1147498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105367-1105454:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1126328-1126569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127220-1127504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1127625-1127715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128742-1128887:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129359-1129544:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131670-1131822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1133667-1133811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1136341-1136568:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136695-1136853:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137905-1138131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1141624-1141880:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1147098-1147498:1:exon

LOC111958602
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1161804..1191947
location: region:1161804-1191947:1
so has part: feature:1161804-1191947:1:exon
subclass of: SO_0000010

111958602
type: Gene
SIO_000068: ncbigene

position:1161804:1
position: 1161804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191947:1
position: 1191947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161804-1191947:1:exon

LOC111958602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958602
product: transmembrane protein 145-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023979865.2
SIO_010081: LOC111958602
subclass of: SO_0000673
so part of: LOC111958602
location: join(1161804..1161966,1176528..1176602,1177033..1177110,1181764..1181850,1183835..1183936,1185397..1185481,1186080..1186151,1187022..1187090,1187372..1187452,1188411..1188489,1190068..1190161,1190954..1191126,1191450..1191574,1191802..1191947)
location: region:1161804-1191947:1
so has part: feature:1161804-1161966:1:exon
so has part: feature:1176528-1176602:1:exon
so has part: feature:1177033-1177110:1:exon
so has part: feature:1181764-1181850:1:exon
so has part: feature:1183835-1183936:1:exon
so has part: feature:1185397-1185481:1:exon
so has part: feature:1186080-1186151:1:exon
so has part: feature:1187022-1187090:1:exon
so has part: feature:1187372-1187452:1:exon
so has part: feature:1188411-1188489:1:exon
so has part: feature:1190068-1190161:1:exon
so has part: feature:1190954-1191126:1:exon
so has part: feature:1191450-1191574:1:exon
so has part: feature:1191802-1191947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1161804-1161966:1:exon

position:1161966:1
position: 1161966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176528-1176602:1:exon

position:1176528:1
position: 1176528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176602:1
position: 1176602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177033-1177110:1:exon

position:1177033:1
position: 1177033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177110:1
position: 1177110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1181764-1181850:1:exon

position:1181764:1
position: 1181764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181850:1
position: 1181850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1183835-1183936:1:exon

position:1183835:1
position: 1183835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183936:1
position: 1183936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1185397-1185481:1:exon

position:1185397:1
position: 1185397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185481:1
position: 1185481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1186080-1186151:1:exon

position:1186080:1
position: 1186080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186151:1
position: 1186151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1187022-1187090:1:exon

position:1187022:1
position: 1187022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187090:1
position: 1187090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1187372-1187452:1:exon

position:1187372:1
position: 1187372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187452:1
position: 1187452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1188411-1188489:1:exon

position:1188411:1
position: 1188411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188489:1
position: 1188489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1190068-1190161:1:exon

position:1190068:1
position: 1190068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190161:1
position: 1190161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1190954-1191126:1:exon

position:1190954:1
position: 1190954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191126:1
position: 1191126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1191450-1191574:1:exon

position:1191450:1
position: 1191450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191574:1
position: 1191574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1191802-1191947:1:exon

position:1191802:1
position: 1191802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 145-like
translation: MEVCERLLCLAVVSSVLCVGSVLGKYVRGIVNTKEDWLFLTRFCFLTDFGRLDFRFRYQKSRCCQNILLYFDDSSQWPAVYKKPDKDCYQKEAVLRPENNQVINLTTRYTWSGCVVEGEGDEEVLSCVGGRSFRSVRERWWYIALSKCGGEGLQLEYEMKLTNGQSFWTQHFSADEFGILETDITFLVIFSLVFILSCYFAYNLKGRQLLHTTYKMFMTAAGVEVVSLLFHCIYWGLYARDGVGNGSLKIMGKFLFFCQFPGVPADADPAGERLTVTRARISHSGSVKLSIYMTVYTVTYIXLFIYEAEFFDPGDVLYAYDSPAGYGLMGLQLLAYVWFCYAVLISLKHYPEKQSFYIPFFTAYTLWFFAVPVMALIANFGIPRWAREKIVNGIQLGIHLYAHIVFLVNFHTRLSISVPDFCTRLSVSVPDFCTRLSFPVPDFCTRLSLSVPDFCT
SIO_010081: LOC111958602
subclass of: SO_0000673
so part of: LOC111958602
location: join(1161862..1161966,1176528..1176602,1177033..1177110,1181764..1181850,1183835..1183936,1185397..1185481,1186080..1186151,1187022..1187090,1187372..1187452,1188411..1188489,1190068..1190161,1190954..1191126,1191450..1191574,1191802..1191947)
location: region:1161862-1191947:1
so has part: feature:1161862-1161966:1:exon
so has part: feature:1176528-1176602:1:exon
so has part: feature:1177033-1177110:1:exon
so has part: feature:1181764-1181850:1:exon
so has part: feature:1183835-1183936:1:exon
so has part: feature:1185397-1185481:1:exon
so has part: feature:1186080-1186151:1:exon
so has part: feature:1187022-1187090:1:exon
so has part: feature:1187372-1187452:1:exon
so has part: feature:1188411-1188489:1:exon
so has part: feature:1190068-1190161:1:exon
so has part: feature:1190954-1191126:1:exon
so has part: feature:1191450-1191574:1:exon
so has part: feature:1191802-1191947:1:exon

XP_023835633.1
type: Protein
SIO_000068: ncbiprotein

position:1161862:1
position: 1161862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161862-1161966:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176528-1176602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177033-1177110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181764-1181850:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183835-1183936:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1185397-1185481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186080-1186151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187022-1187090:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1187372-1187452:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1188411-1188489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1190068-1190161:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1190954-1191126:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1191450-1191574:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1191802-1191947:1:exon

LOC111958626
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1193280..1195499
location: region:1193280-1195499:1
so has part: feature:1193280-1195499:1:exon
subclass of: SO_0000011

111958626
type: Gene
SIO_000068: ncbigene

position:1193280:1
position: 1193280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195499:1
position: 1195499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193280-1195499:1:exon

LOC111958626
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111958626
product: uncharacterized LOC111958626
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_002876562.1
SIO_010081: LOC111958626
subclass of: SO_0000673
so part of: LOC111958626
location: join(1193280..1193320,1194712..1195499)
location: region:1193280-1195499:1
so has part: feature:1193280-1193320:1:exon
so has part: feature:1194712-1195499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1193280-1193320:1:exon

position:1193320:1
position: 1193320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1194712-1195499:1:exon

position:1194712:1
position: 1194712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959121
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1198220..1200262)
location: region:1198220-1200262:-1
so has part: feature:1198220-1200262:-1:exon
subclass of: SO_0000010

111959121
type: Gene
SIO_000068: ncbigene

position:1198220:-1
position: 1198220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200262:-1
position: 1200262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198220-1200262:-1:exon

LOC111959121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959121
product: 39S ribosomal protein L17, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023980568.1
SIO_010081: LOC111959121
subclass of: SO_0000673
so part of: LOC111959121
location: complement(join(1198220..1198857,1199025..1199093,1199882..1200262))
location: region:1198220-1200262:-1
so has part: feature:1199882-1200262:-1:exon
so has part: feature:1199025-1199093:-1:exon
so has part: feature:1198220-1198857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1199882-1200262:-1:exon

position:1199882:-1
position: 1199882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1199025-1199093:-1:exon

position:1199025:-1
position: 1199025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199093:-1
position: 1199093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1198220-1198857:-1:exon

position:1198857:-1
position: 1198857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111959121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L17, mitochondrial
translation: MRLTIQMLISHGRVARKMGLGPESRINMLRNILTGLVRHERIETTRGRADEVRFYAEKLIDYAKKGDTDEKAMKMANFWLTEKDLIPKLFKVLAPRFETQPKAYTRMARIPNRENLDKAAMAVLEYKGNPFPPLQTAKRDNELTLINQLLKGYREERAQQAAAKVEA
SIO_010081: LOC111959121
subclass of: SO_0000673
so part of: LOC111959121
location: complement(join(1198597..1198857,1199025..1199093,1199882..1200055))
location: region:1198597-1200055:-1
so has part: feature:1199882-1200055:-1:exon
so has part: feature:1199025-1199093:-1:exon
so has part: feature:1198597-1198857:-1:exon

XP_023836336.1
type: Protein
SIO_000068: ncbiprotein

position:1198597:-1
position: 1198597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200055:-1
position: 1200055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199882-1200055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1199025-1199093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198597-1198857:-1:exon

LOC111958580
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1203362..1209062)
location: region:1203362-1209062:-1
so has part: feature:1203362-1209062:-1:exon

111958580
type: Gene
SIO_000068: ncbigene

position:1203362:-1
position: 1203362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209062:-1
position: 1209062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203362-1209062:-1:exon

LOC111958580
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958580
subclass of: SO_0000673
so part of: LOC111958580
location: complement(1203362..1203421)
location: region:1203362-1203421:-1
so has part: feature:1203362-1203421:-1:exon

position:1203421:-1
position: 1203421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203362-1203421:-1:exon

LOC111958580
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958580
subclass of: SO_0000673
so part of: LOC111958580
location: complement(1203666..1203821)
location: region:1203666-1203821:-1
so has part: feature:1203666-1203821:-1:exon

position:1203666:-1
position: 1203666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203821:-1
position: 1203821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203666-1203821:-1:exon

LOC111958580
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958580
subclass of: SO_0000673
so part of: LOC111958580
location: complement(1204000..1204252)
location: region:1204000-1204252:-1
so has part: feature:1204000-1204252:-1:exon

position:1204000:-1
position: 1204000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204252:-1
position: 1204252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204000-1204252:-1:exon

LOC111958580
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958580
subclass of: SO_0000673
so part of: LOC111958580
location: complement(1204587..1204735)
location: region:1204587-1204735:-1
so has part: feature:1204587-1204735:-1:exon

position:1204587:-1
position: 1204587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204735:-1
position: 1204735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204587-1204735:-1:exon

LOC111958580
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958580
subclass of: SO_0000673
so part of: LOC111958580
location: complement(1207833..1207836)
location: region:1207833-1207836:-1
so has part: feature:1207833-1207836:-1:exon

position:1207833:-1
position: 1207833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207836:-1
position: 1207836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207833-1207836:-1:exon

LOC111958580
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958580
subclass of: SO_0000673
so part of: LOC111958580
location: complement(1209027..1209062)
location: region:1209027-1209062:-1
so has part: feature:1209027-1209062:-1:exon

position:1209027:-1
position: 1209027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209027-1209062:-1:exon

LOC111958753
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1218230..1228144
location: region:1218230-1228144:1
so has part: feature:1218230-1228144:1:exon

111958753
type: Gene
SIO_000068: ncbigene

position:1218230:1
position: 1218230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228144:1
position: 1228144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218230-1228144:1:exon

LOC111958753
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958753
subclass of: SO_0000673
so part of: LOC111958753
location: 1218230..1218269
location: region:1218230-1218269:1
so has part: feature:1218230-1218269:1:exon

position:1218269:1
position: 1218269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218230-1218269:1:exon

LOC111958753
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958753
subclass of: SO_0000673
so part of: LOC111958753
location: 1218445..1218510
location: region:1218445-1218510:1
so has part: feature:1218445-1218510:1:exon

position:1218445:1
position: 1218445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218510:1
position: 1218510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218445-1218510:1:exon

LOC111958753
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958753
subclass of: SO_0000673
so part of: LOC111958753
location: 1226883..1226970
location: region:1226883-1226970:1
so has part: feature:1226883-1226970:1:exon

position:1226883:1
position: 1226883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226970:1
position: 1226970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226883-1226970:1:exon

LOC111958753
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958753
subclass of: SO_0000673
so part of: LOC111958753
location: 1227134..1227377
location: region:1227134-1227377:1
so has part: feature:1227134-1227377:1:exon

position:1227134:1
position: 1227134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227377:1
position: 1227377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227134-1227377:1:exon

LOC111958753
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958753
subclass of: SO_0000673
so part of: LOC111958753
location: 1227563..1227687
location: region:1227563-1227687:1
so has part: feature:1227563-1227687:1:exon

position:1227563:1
position: 1227563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227687:1
position: 1227687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227563-1227687:1:exon

LOC111958753
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958753
subclass of: SO_0000673
so part of: LOC111958753
location: 1227820..1227921
location: region:1227820-1227921:1
so has part: feature:1227820-1227921:1:exon

position:1227820:1
position: 1227820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227921:1
position: 1227921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227820-1227921:1:exon

LOC111958753
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958753
subclass of: SO_0000673
so part of: LOC111958753
location: 1228097..1228144
location: region:1228097-1228144:1
so has part: feature:1228097-1228144:1:exon

position:1228097:1
position: 1228097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228097-1228144:1:exon

LOC111958752
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1229457..1231160
location: region:1229457-1231160:1
so has part: feature:1229457-1231160:1:exon

111958752
type: Gene
SIO_000068: ncbigene

position:1229457:1
position: 1229457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231160:1
position: 1231160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229457-1231160:1:exon

LOC111958752
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958752
subclass of: SO_0000673
so part of: LOC111958752
location: 1229457..1229496
location: region:1229457-1229496:1
so has part: feature:1229457-1229496:1:exon

position:1229496:1
position: 1229496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229457-1229496:1:exon

LOC111958752
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958752
subclass of: SO_0000673
so part of: LOC111958752
location: 1229681..1229828
location: region:1229681-1229828:1
so has part: feature:1229681-1229828:1:exon

position:1229681:1
position: 1229681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229828:1
position: 1229828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229681-1229828:1:exon

LOC111958752
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958752
subclass of: SO_0000673
so part of: LOC111958752
location: 1229968..1230211
location: region:1229968-1230211:1
so has part: feature:1229968-1230211:1:exon

position:1229968:1
position: 1229968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230211:1
position: 1230211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229968-1230211:1:exon

LOC111958752
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958752
subclass of: SO_0000673
so part of: LOC111958752
location: 1230417..1230556
location: region:1230417-1230556:1
so has part: feature:1230417-1230556:1:exon

position:1230417:1
position: 1230417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230556:1
position: 1230556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230417-1230556:1:exon

LOC111958752
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958752
subclass of: SO_0000673
so part of: LOC111958752
location: 1230691..1230792
location: region:1230691-1230792:1
so has part: feature:1230691-1230792:1:exon

position:1230691:1
position: 1230691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230792:1
position: 1230792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230691-1230792:1:exon

LOC111958752
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958752
subclass of: SO_0000673
so part of: LOC111958752
location: 1230980..1231160
location: region:1230980-1231160:1
so has part: feature:1230980-1231160:1:exon

position:1230980:1
position: 1230980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230980-1231160:1:exon

LOC111958603
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1244834..1275298
location: region:1244834-1275298:1
so has part: feature:1244834-1275298:1:exon

111958603
type: Gene
SIO_000068: ncbigene

position:1244834:1
position: 1244834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275298:1
position: 1275298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1244834-1275298:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1244834..1244904
location: region:1244834-1244904:1
so has part: feature:1244834-1244904:1:exon

position:1244904:1
position: 1244904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1244834-1244904:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1245083..1245233
location: region:1245083-1245233:1
so has part: feature:1245083-1245233:1:exon

position:1245083:1
position: 1245083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245233:1
position: 1245233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245083-1245233:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1245398..1245681
location: region:1245398-1245681:1
so has part: feature:1245398-1245681:1:exon

position:1245398:1
position: 1245398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245681:1
position: 1245681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245398-1245681:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1255777..1256358
location: region:1255777-1256358:1
so has part: feature:1255777-1256358:1:exon

position:1255777:1
position: 1255777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256358:1
position: 1256358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255777-1256358:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1256411..1256706
location: region:1256411-1256706:1
so has part: feature:1256411-1256706:1:exon

position:1256411:1
position: 1256411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256706:1
position: 1256706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256411-1256706:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1267087..1267115
location: region:1267087-1267115:1
so has part: feature:1267087-1267115:1:exon

position:1267087:1
position: 1267087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267115:1
position: 1267115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267087-1267115:1:exon

LOC111958751
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1268808..1270507)
location: region:1268808-1270507:-1
so has part: feature:1268808-1270507:-1:exon
subclass of: SO_0000010

111958751
type: Gene
SIO_000068: ncbigene

position:1268808:-1
position: 1268808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270507:-1
position: 1270507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268808-1270507:-1:exon

LOC111958751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958751
product: trypsin-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_023980006.2
SIO_010081: LOC111958751
subclass of: SO_0000673
so part of: LOC111958751
location: complement(join(1268808..1269015,1269124..1269260,1269499..1269758,1269992..1270145,1270401..1270507))
location: region:1268808-1270507:-1
so has part: feature:1270401-1270507:-1:exon
so has part: feature:1269992-1270145:-1:exon
so has part: feature:1269499-1269758:-1:exon
so has part: feature:1269124-1269260:-1:exon
so has part: feature:1268808-1269015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1270401-1270507:-1:exon

position:1270401:-1
position: 1270401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1269992-1270145:-1:exon

position:1269992:-1
position: 1269992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270145:-1
position: 1270145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1269499-1269758:-1:exon

position:1269499:-1
position: 1269499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269758:-1
position: 1269758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1269124-1269260:-1:exon

position:1269124:-1
position: 1269124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269260:-1
position: 1269260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1268808-1269015:-1:exon

position:1269015:-1
position: 1269015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trypsin-2
translation: MKTCLSSTMIGLIVLTLLGAAAAAPMDDRIVGGYECEAHSQPWQASLNIGYHFCGGSLINDQWIISAAHCWMNPWSQLAILGDHHIWEHEGTEQYMSVDAIYWHQSYDYQTLDHDIMLLKLAHPVTLNKFVKPIALPTACPKAGDMCVVSGWGNIYTDSVFNPFNLQCVNIPILSKKACEESYPGQITDTMVCAGYLEGGKDACQGDSGGPLVCNGELHGIVSWGVGCAQPNYPGVYTKVCALLPWIDEIITNY
SIO_010081: LOC111958751
subclass of: SO_0000673
so part of: LOC111958751
location: complement(join(1268866..1269015,1269124..1269260,1269499..1269758,1269992..1270145,1270401..1270464))
location: region:1268866-1270464:-1
so has part: feature:1270401-1270464:-1:exon
so has part: feature:1269992-1270145:-1:exon
so has part: feature:1269499-1269758:-1:exon
so has part: feature:1269124-1269260:-1:exon
so has part: feature:1268866-1269015:-1:exon

XP_023835774.1
type: Protein
SIO_000068: ncbiprotein

position:1268866:-1
position: 1268866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270464:-1
position: 1270464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270401-1270464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1269992-1270145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269499-1269758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269124-1269260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268866-1269015:-1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1270407..1270417
location: region:1270407-1270417:1
so has part: feature:1270407-1270417:1:exon

position:1270407:1
position: 1270407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270417:1
position: 1270417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270407-1270417:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1273063..1273143
location: region:1273063-1273143:1
so has part: feature:1273063-1273143:1:exon

position:1273063:1
position: 1273063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273143:1
position: 1273143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1273063-1273143:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1273399..1273555
location: region:1273399-1273555:1
so has part: feature:1273399-1273555:1:exon

position:1273399:1
position: 1273399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273555:1
position: 1273555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1273399-1273555:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1273948..1274046
location: region:1273948-1274046:1
so has part: feature:1273948-1274046:1:exon

position:1273948:1
position: 1273948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274046:1
position: 1274046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1273948-1274046:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1274186..1274346
location: region:1274186-1274346:1
so has part: feature:1274186-1274346:1:exon

position:1274186:1
position: 1274186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274346:1
position: 1274346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274186-1274346:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1274571..1274708
location: region:1274571-1274708:1
so has part: feature:1274571-1274708:1:exon

position:1274571:1
position: 1274571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274708:1
position: 1274708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274571-1274708:1:exon

LOC111958603
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111958603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111958603
subclass of: SO_0000673
so part of: LOC111958603
location: 1274987..1275298
location: region:1274987-1275298:1
so has part: feature:1274987-1275298:1:exon

position:1274987:1
position: 1274987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274987-1275298:1:exon

LOC111958754
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1275821..1278807)
location: region:1275821-1278807:-1
so has part: feature:1275821-1278807:-1:exon
subclass of: SO_0000011

111958754
type: Gene
SIO_000068: ncbigene

position:1275821:-1
position: 1275821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278807:-1
position: 1278807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275821-1278807:-1:exon

LOC111958754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111958754
product: uncharacterized LOC111958754, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XR_002876572.2
SIO_010081: LOC111958754
subclass of: SO_0000673
so part of: LOC111958754
location: complement(join(1275821..1276043,1277860..1277924,1278540..1278598,1278733..1278807))
location: region:1275821-1278807:-1
so has part: feature:1278733-1278807:-1:exon
so has part: feature:1278540-1278598:-1:exon
so has part: feature:1277860-1277924:-1:exon
so has part: feature:1275821-1276043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1278733-1278807:-1:exon

position:1278733:-1
position: 1278733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1278540-1278598:-1:exon

position:1278540:-1
position: 1278540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278598:-1
position: 1278598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1277860-1277924:-1:exon

position:1277860:-1
position: 1277860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277924:-1
position: 1277924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1275821-1276043:-1:exon

position:1276043:-1
position: 1276043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111958754
product: uncharacterized LOC111958754, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_002876573.2
SIO_010081: LOC111958754
subclass of: SO_0000673
so part of: LOC111958754
location: complement(join(1277654..1277696,1277860..1277924,1278540..1278598,1278733..1278807))
location: region:1277654-1278807:-1
so has part: feature:1278733-1278807:-1:exon
so has part: feature:1278540-1278598:-1:exon
so has part: feature:1277860-1277924:-1:exon
so has part: feature:1277654-1277696:-1:exon

position:1277654:-1
position: 1277654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278733-1278807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278540-1278598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277860-1277924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277654-1277696:-1:exon

position:1277696:-1
position: 1277696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112067961
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1283234..1297072)
location: region:1283234-1297072:-1
so has part: feature:1283234-1297072:-1:exon
subclass of: SO_0000010

112067961
type: Gene
SIO_000068: ncbigene

position:1283234:-1
position: 1283234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297072:-1
position: 1297072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283234-1297072:-1:exon

LOC112067961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC112067961
product: E3 ubiquitin-protein ligase CBL-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_024134903.1
SIO_010081: LOC112067961
subclass of: SO_0000673
so part of: LOC112067961
location: complement(join(1283234..1283474,1284290..1284411,1284639..1284795,1287282..1287428,1295835..1297072))
location: region:1283234-1297072:-1
so has part: feature:1295835-1297072:-1:exon
so has part: feature:1287282-1287428:-1:exon
so has part: feature:1284639-1284795:-1:exon
so has part: feature:1284290-1284411:-1:exon
so has part: feature:1283234-1283474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1295835-1297072:-1:exon

position:1295835:-1
position: 1295835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287282-1287428:-1:exon

position:1287282:-1
position: 1287282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287428:-1
position: 1287428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1284639-1284795:-1:exon

position:1284639:-1
position: 1284639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284795:-1
position: 1284795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1284290-1284411:-1:exon

position:1284290:-1
position: 1284290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284411:-1
position: 1284411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1283234-1283474:-1:exon

position:1283474:-1
position: 1283474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112067961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC112067961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CBL-like
translation: MATGGNGLGSDRSLKSTSQPPSASDRRQVDKALKRLEKLHRLCTNPRLGLRNSPPYLPEVVSETATLLTQVWEPYRGPAAGVQAPRGDEGEYLRIHARHLLDKTNRAVLLFKEGRDKMFEEMSSYRRNLTKLSLLFSHMLWELRAMFPEGRFQGHTYRLTKTEAGEFWRRAFGNKCIVQWSSFKQHLRRVHGFEEGMESMALKSTVDLTCNDHISVFEFDIFTRLFQPWTSLLRNWNQLAVTHPGYMAFLTYDQVKARLQNYLHRPGSYIFRLSCTQMGQWAIGHVTGDGGIVQTIPQNTPLYQALIQGFREGW
SIO_010081: LOC112067961
subclass of: SO_0000673
so part of: LOC112067961
location: complement(join(1283333..1283474,1284290..1284411,1284639..1284795,1287282..1287428,1295835..1296211))
location: region:1283333-1296211:-1
so has part: feature:1295835-1296211:-1:exon
so has part: feature:1287282-1287428:-1:exon
so has part: feature:1284639-1284795:-1:exon
so has part: feature:1284290-1284411:-1:exon
so has part: feature:1283333-1283474:-1:exon

XP_023990671.1
type: Protein
SIO_000068: ncbiprotein

position:1283333:-1
position: 1283333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296211:-1
position: 1296211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295835-1296211:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287282-1287428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1284639-1284795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284290-1284411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283333-1283474:-1:exon

LOC111958790
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1303996..1324716
location: region:1303996-1324716:1
so has part: feature:1303996-1324716:1:exon
subclass of: SO_0000010

111958790
type: Gene
SIO_000068: ncbigene

position:1303996:1
position: 1303996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324716:1
position: 1324716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303996-1324716:1:exon

LOC111958790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958790
product: B-cell lymphoma 3 protein homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023980062.1
SIO_010081: LOC111958790
subclass of: SO_0000673
so part of: LOC111958790
location: join(1303996..1305998,1306507..1306666,1316752..1316860,1320712..1320913,1321477..1321565,1321751..1321831,1322080..1322247,1323604..1323706,1323792..1324716)
location: region:1303996-1324716:1
so has part: feature:1303996-1305998:1:exon
so has part: feature:1306507-1306666:1:exon
so has part: feature:1316752-1316860:1:exon
so has part: feature:1320712-1320913:1:exon
so has part: feature:1321477-1321565:1:exon
so has part: feature:1321751-1321831:1:exon
so has part: feature:1322080-1322247:1:exon
so has part: feature:1323604-1323706:1:exon
so has part: feature:1323792-1324716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303996-1305998:1:exon

position:1305998:1
position: 1305998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1306507-1306666:1:exon

position:1306507:1
position: 1306507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306666:1
position: 1306666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1316752-1316860:1:exon

position:1316752:1
position: 1316752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316860:1
position: 1316860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1320712-1320913:1:exon

position:1320712:1
position: 1320712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320913:1
position: 1320913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1321477-1321565:1:exon

position:1321477:1
position: 1321477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321565:1
position: 1321565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1321751-1321831:1:exon

position:1321751:1
position: 1321751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321831:1
position: 1321831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1322080-1322247:1:exon

position:1322080:1
position: 1322080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322247:1
position: 1322247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1323604-1323706:1:exon

position:1323604:1
position: 1323604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323706:1
position: 1323706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1323792-1324716:1:exon

position:1323792:1
position: 1323792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958790
product: B-cell lymphoma 3 protein homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_023980063.1
SIO_010081: LOC111958790
subclass of: SO_0000673
so part of: LOC111958790
location: join(1303996..1305998,1306507..1306666,1316752..1316860,1320712..1320913,1321477..1321565,1321754..1321831,1322080..1322247,1323604..1323706,1323792..1324716)
location: region:1303996-1324716:1
so has part: feature:1303996-1305998:1:exon
so has part: feature:1306507-1306666:1:exon
so has part: feature:1316752-1316860:1:exon
so has part: feature:1320712-1320913:1:exon
so has part: feature:1321477-1321565:1:exon
so has part: feature:1321754-1321831:1:exon
so has part: feature:1322080-1322247:1:exon
so has part: feature:1323604-1323706:1:exon
so has part: feature:1323792-1324716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303996-1305998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306507-1306666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316752-1316860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1320712-1320913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1321477-1321565:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321754-1321831:1:exon

position:1321754:1
position: 1321754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1322080-1322247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1323604-1323706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323792-1324716:1:exon

LOC111958790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958790
product: B-cell lymphoma 3 protein homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_024134904.1
SIO_010081: LOC111958790
subclass of: SO_0000673
so part of: LOC111958790
location: join(1303996..1305674,1306507..1306666,1316752..1316860,1320712..1320913,1321477..1321565,1321751..1321831,1322080..1322247,1323604..1323706,1323792..1324716)
location: region:1303996-1324716:1
so has part: feature:1303996-1305674:1:exon
so has part: feature:1306507-1306666:1:exon
so has part: feature:1316752-1316860:1:exon
so has part: feature:1320712-1320913:1:exon
so has part: feature:1321477-1321565:1:exon
so has part: feature:1321751-1321831:1:exon
so has part: feature:1322080-1322247:1:exon
so has part: feature:1323604-1323706:1:exon
so has part: feature:1323792-1324716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303996-1305674:1:exon

position:1305674:1
position: 1305674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1306507-1306666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316752-1316860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1320712-1320913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1321477-1321565:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321751-1321831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1322080-1322247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1323604-1323706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323792-1324716:1:exon

LOC111958790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell lymphoma 3 protein homolog isoform X1
translation: MPRTMTMNGHQTQPTAPLDLSTTTRERGSGADRTPTSKGRSVSVRMQYPAAPLTEGDCPNGNPSHTVEPLEHRCGVSLIKPPVKTGNPAFLEKKHSPAATSHTPFTPNPGESSTTDTRTQNISSSWLPFRKRPFPSEWETPEQSRTPPGREERLSPYKNKDLCCRPSPPNILLKSYDDESIGTLASVSHRQLSAASGFDNEHQSIDPVRSMQAPRPYYPYPGYPFYSWPSRSPLVVNVPVSHLQSSLYPGHTEHLLADVALATRQDNDGDTALHIAVVQGQDAQIQRMILLLGLVHTDLDIYNNLRQTPLHLAVITHQAHLVGALLRAGADPQALDRNGQTTVHLCCEHGQQACLSVVLSHPSILTCLEVRNYEGLSPLHLAVQGGHKELVRMLLDAGADINAMQDIKSGHSPLIHAVENHNMDMVHFLIENDCNVNGQSYSGNTALHCACGRGQVDTARLLLKNRADSSVKNYHNDTPAMVANNKKVTDVLRGKGSRNQQPKAQCVPASPHRXTPQSQNRGSPSPSLGLSPLATPTASPLHCSSSHSPRAPPTPSPHSQSAESLSGRQSPMKIRESEQLPVRLDSNRMTAVDISLAQRRSHSYPPAMHHQSPITDAPIGHLLAYYSPGVQRHLYPEPPFILLHTNIPYPATVSTASQMTPGQSRPSSQCSDQSDVSIMSVSSSMGKGNS
SIO_010081: LOC111958790
subclass of: SO_0000673
so part of: LOC111958790
location: join(1305347..1305998,1306507..1306666,1316752..1316860,1320712..1320913,1321477..1321565,1321751..1321831,1322080..1322247,1323604..1323706,1323792..1324300)
location: region:1305347-1324300:1
so has part: feature:1305347-1305998:1:exon
so has part: feature:1306507-1306666:1:exon
so has part: feature:1316752-1316860:1:exon
so has part: feature:1320712-1320913:1:exon
so has part: feature:1321477-1321565:1:exon
so has part: feature:1321751-1321831:1:exon
so has part: feature:1322080-1322247:1:exon
so has part: feature:1323604-1323706:1:exon
so has part: feature:1323792-1324300:1:exon

XP_023835830.1
type: Protein
SIO_000068: ncbiprotein

position:1305347:1
position: 1305347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324300:1
position: 1324300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305347-1305998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306507-1306666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316752-1316860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1320712-1320913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1321477-1321565:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321751-1321831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1322080-1322247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1323604-1323706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323792-1324300:1:exon

LOC111958790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell lymphoma 3 protein homolog isoform X2
translation: MPRTMTMNGHQTQPTAPLDLSTTTRERGSGADRTPTSKGRSVSVRMQYPAAPLTEGDCPNGNPSHTVEPLEHRCGVSLIKPPVKTGNPAFLEKKHSPAATSHTPFTPNPGESSTTDTRTQNISSSWLPFRKRPFPSEWETPEQSRTPPGREERLSPYKNKDLCCRPSPPNILLKSYDDESIGTLASVSHRQLSAASGFDNEHQSIDPVRSMQAPRPYYPYPGYPFYSWPSRSPLVVNVPVSHLQSSLYPGHTEHLLADVALATRQDNDGDTALHIAVVQGQDAQIQRMILLLGLVHTDLDIYNNLRQTPLHLAVITHQAHLVGALLRAGADPQALDRNGQTTVHLCCEHGQQACLSVVLSHPSILTCLEVRNYEGLSPLHLAVQGGHKELVRMLLDAGADINAMDIKSGHSPLIHAVENHNMDMVHFLIENDCNVNGQSYSGNTALHCACGRGQVDTARLLLKNRADSSVKNYHNDTPAMVANNKKVTDVLRGKGSRNQQPKAQCVPASPHRXTPQSQNRGSPSPSLGLSPLATPTASPLHCSSSHSPRAPPTPSPHSQSAESLSGRQSPMKIRESEQLPVRLDSNRMTAVDISLAQRRSHSYPPAMHHQSPITDAPIGHLLAYYSPGVQRHLYPEPPFILLHTNIPYPATVSTASQMTPGQSRPSSQCSDQSDVSIMSVSSSMGKGNS
SIO_010081: LOC111958790
subclass of: SO_0000673
so part of: LOC111958790
location: join(1305347..1305998,1306507..1306666,1316752..1316860,1320712..1320913,1321477..1321565,1321754..1321831,1322080..1322247,1323604..1323706,1323792..1324300)
location: region:1305347-1324300:1
so has part: feature:1305347-1305998:1:exon
so has part: feature:1306507-1306666:1:exon
so has part: feature:1316752-1316860:1:exon
so has part: feature:1320712-1320913:1:exon
so has part: feature:1321477-1321565:1:exon
so has part: feature:1321754-1321831:1:exon
so has part: feature:1322080-1322247:1:exon
so has part: feature:1323604-1323706:1:exon
so has part: feature:1323792-1324300:1:exon

XP_023835831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305347-1305998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306507-1306666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316752-1316860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1320712-1320913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1321477-1321565:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321754-1321831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1322080-1322247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1323604-1323706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323792-1324300:1:exon

LOC111958790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell lymphoma 3 protein homolog isoform X3
translation: MPRTMTMNGHQTQPTAPLDLSTTTRERGSGADRTPTSKGRSVSVRMQYPAAPLTEGDCPNGNPSHTVEPLEHRCGVSLIKPPVKTGNPAFLEKKHSPAATSHTPFTPNPDPYPGYPFYSWPSRSPLVVNVPVSHLQSSLYPGHTEHLLADVALATRQDNDGDTALHIAVVQGQDAQIQRMILLLGLVHTDLDIYNNLRQTPLHLAVITHQAHLVGALLRAGADPQALDRNGQTTVHLCCEHGQQACLSVVLSHPSILTCLEVRNYEGLSPLHLAVQGGHKELVRMLLDAGADINAMQDIKSGHSPLIHAVENHNMDMVHFLIENDCNVNGQSYSGNTALHCACGRGQVDTARLLLKNRADSSVKNYHNDTPAMVANNKKVTDVLRGKGSRNQQPKAQCVPASPHRXTPQSQNRGSPSPSLGLSPLATPTASPLHCSSSHSPRAPPTPSPHSQSAESLSGRQSPMKIRESEQLPVRLDSNRMTAVDISLAQRRSHSYPPAMHHQSPITDAPIGHLLAYYSPGVQRHLYPEPPFILLHTNIPYPATVSTASQMTPGQSRPSSQCSDQSDVSIMSVSSSMGKGNS
SIO_010081: LOC111958790
subclass of: SO_0000673
so part of: LOC111958790
location: join(1305347..1305674,1306507..1306666,1316752..1316860,1320712..1320913,1321477..1321565,1321751..1321831,1322080..1322247,1323604..1323706,1323792..1324300)
location: region:1305347-1324300:1
so has part: feature:1305347-1305674:1:exon
so has part: feature:1306507-1306666:1:exon
so has part: feature:1316752-1316860:1:exon
so has part: feature:1320712-1320913:1:exon
so has part: feature:1321477-1321565:1:exon
so has part: feature:1321751-1321831:1:exon
so has part: feature:1322080-1322247:1:exon
so has part: feature:1323604-1323706:1:exon
so has part: feature:1323792-1324300:1:exon

XP_023990672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305347-1305674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306507-1306666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316752-1316860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1320712-1320913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1321477-1321565:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321751-1321831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1322080-1322247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1323604-1323706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323792-1324300:1:exon

LOC111958792
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1324812..>1328240)
location: region:1324812-1328240:-1
so has part: feature:1324812-1328240:-1:exon
subclass of: SO_0000010

111958792
type: Gene
SIO_000068: ncbigene

position:1324812:-1
position: 1324812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328240:-1
position: 1328240
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1324812-1328240:-1:exon

LOC111958792
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958792
product: mitochondrial import receptor subunit TOM40 homolog
inference: similar to RNA sequence (same species):INSD:GEKT01086359.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 105 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_023980064.1
SIO_010081: LOC111958792
subclass of: SO_0000673
so part of: LOC111958792
location: complement(join(1324812..1325517,1325673..1325775,1326079..1326155,1326263..1326385,1326638..1326743,1326853..1326954,1327065..1327157,1327379..1327446,1328079..>1328240))
location: region:1324812-1328240:-1
so has part: feature:1328079-1328240:-1:exon
so has part: feature:1327379-1327446:-1:exon
so has part: feature:1327065-1327157:-1:exon
so has part: feature:1326853-1326954:-1:exon
so has part: feature:1326638-1326743:-1:exon
so has part: feature:1326263-1326385:-1:exon
so has part: feature:1326079-1326155:-1:exon
so has part: feature:1325673-1325775:-1:exon
so has part: feature:1324812-1325517:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1328079-1328240:-1:exon

position:1328079:-1
position: 1328079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1327379-1327446:-1:exon

position:1327379:-1
position: 1327379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327446:-1
position: 1327446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327065-1327157:-1:exon

position:1327065:-1
position: 1327065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327157:-1
position: 1327157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1326853-1326954:-1:exon

position:1326853:-1
position: 1326853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326954:-1
position: 1326954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1326638-1326743:-1:exon

position:1326638:-1
position: 1326638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326743:-1
position: 1326743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1326263-1326385:-1:exon

position:1326263:-1
position: 1326263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326385:-1
position: 1326385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1326079-1326155:-1:exon

position:1326079:-1
position: 1326079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326155:-1
position: 1326155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1325673-1325775:-1:exon

position:1325673:-1
position: 1325673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325775:-1
position: 1325775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1324812-1325517:-1:exon

position:1325517:-1
position: 1325517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958792
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958792
inference: similar to RNA sequence (same species):INSD:GEKT01086359.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 49 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: mitochondrial import receptor subunit TOM40 homolog
translation: MGNVLAASSPAPPSAPGSGVVQGAPGLVSAPPGFSMPSVPPPSVPGQPAGETGSPLPNPGTYEECHRKCKEVFPIQMEGVRLVVNKGLSNHFQVSHTVTLSTXAESGYRFGATYVGTQQTGPAESFPVMVGDMDNTGSLNAQVIHQLTSAVRSKIAIQTQQHKFVNWQCDMEYRGDDFTSAVTLGNPDVLLGSGIIVAHYLQSISPALALGGELVYHRRPGEEGAVTSLMGRYTGNNYVATLTLGGAGAHATYYHRANDQLQLGVEFEGSMRTQETSVSFGYQLDLPKANLLFKGSVDSNWVVGAVLEKKLLPLPLSLALGAFLNQKKNKFQCGFNVTVG
SIO_010081: LOC111958792
subclass of: SO_0000673
so part of: LOC111958792
location: complement(join(1325378..1325517,1325673..1325775,1326079..1326155,1326263..1326385,1326638..1326743,1326853..1326954,1327065..1327157,1327379..1327446,1328079..>1328240))
location: region:1325378-1328240:-1
so has part: feature:1328079-1328240:-1:exon
so has part: feature:1327379-1327446:-1:exon
so has part: feature:1327065-1327157:-1:exon
so has part: feature:1326853-1326954:-1:exon
so has part: feature:1326638-1326743:-1:exon
so has part: feature:1326263-1326385:-1:exon
so has part: feature:1326079-1326155:-1:exon
so has part: feature:1325673-1325775:-1:exon
so has part: feature:1325378-1325517:-1:exon

XP_023835832.1
type: Protein
SIO_000068: ncbiprotein

position:1325378:-1
position: 1325378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328079-1328240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327379-1327446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1327065-1327157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1326853-1326954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1326638-1326743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1326263-1326385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1326079-1326155:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325673-1325775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1325378-1325517:-1:exon

LOC111959128
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1330381..1349083)
location: region:1330381-1349083:-1
so has part: feature:1330381-1349083:-1:exon
subclass of: SO_0000010

111959128
type: Gene
SIO_000068: ncbigene

position:1330381:-1
position: 1330381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349083:-1
position: 1349083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1330381-1349083:-1:exon

LOC111959128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959128
product: probable ATP-dependent RNA helicase ddx6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_023980576.2
SIO_010081: LOC111959128
subclass of: SO_0000673
so part of: LOC111959128
location: complement(join(1330381..1332415,1332699..1332910,1333054..1333155,1333266..1333329,1333459..1333575,1337966..1338094,1338264..1338386,1340024..1340118,1344814..1344960,1345567..1345696,1345815..1345919,1346014..1347067,1348916..1349083))
location: region:1330381-1349083:-1
so has part: feature:1348916-1349083:-1:exon
so has part: feature:1346014-1347067:-1:exon
so has part: feature:1345815-1345919:-1:exon
so has part: feature:1345567-1345696:-1:exon
so has part: feature:1344814-1344960:-1:exon
so has part: feature:1340024-1340118:-1:exon
so has part: feature:1338264-1338386:-1:exon
so has part: feature:1337966-1338094:-1:exon
so has part: feature:1333459-1333575:-1:exon
so has part: feature:1333266-1333329:-1:exon
so has part: feature:1333054-1333155:-1:exon
so has part: feature:1332699-1332910:-1:exon
so has part: feature:1330381-1332415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1348916-1349083:-1:exon

position:1348916:-1
position: 1348916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1346014-1347067:-1:exon

position:1346014:-1
position: 1346014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347067:-1
position: 1347067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1345815-1345919:-1:exon

position:1345815:-1
position: 1345815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345919:-1
position: 1345919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1345567-1345696:-1:exon

position:1345567:-1
position: 1345567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345696:-1
position: 1345696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1344814-1344960:-1:exon

position:1344814:-1
position: 1344814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344960:-1
position: 1344960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1340024-1340118:-1:exon

position:1340024:-1
position: 1340024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340118:-1
position: 1340118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1338264-1338386:-1:exon

position:1338264:-1
position: 1338264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338386:-1
position: 1338386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1337966-1338094:-1:exon

position:1337966:-1
position: 1337966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338094:-1
position: 1338094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1333459-1333575:-1:exon

position:1333459:-1
position: 1333459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333575:-1
position: 1333575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1333266-1333329:-1:exon

position:1333266:-1
position: 1333266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333329:-1
position: 1333329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1333054-1333155:-1:exon

position:1333054:-1
position: 1333054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333155:-1
position: 1333155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1332699-1332910:-1:exon

position:1332699:-1
position: 1332699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332910:-1
position: 1332910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1330381-1332415:-1:exon

position:1332415:-1
position: 1332415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111959128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959128
product: probable ATP-dependent RNA helicase ddx6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_023980575.2
SIO_010081: LOC111959128
subclass of: SO_0000673
so part of: LOC111959128
location: complement(join(1330381..1332415,1332699..1332910,1333054..1333155,1333266..1333329,1333459..1333575,1337966..1338094,1338264..1338386,1340024..1340118,1344814..1344960,1345567..1345696,1345815..1345919,1346014..1347067,1348096..1348567))
location: region:1330381-1348567:-1
so has part: feature:1348096-1348567:-1:exon
so has part: feature:1346014-1347067:-1:exon
so has part: feature:1345815-1345919:-1:exon
so has part: feature:1345567-1345696:-1:exon
so has part: feature:1344814-1344960:-1:exon
so has part: feature:1340024-1340118:-1:exon
so has part: feature:1338264-1338386:-1:exon
so has part: feature:1337966-1338094:-1:exon
so has part: feature:1333459-1333575:-1:exon
so has part: feature:1333266-1333329:-1:exon
so has part: feature:1333054-1333155:-1:exon
so has part: feature:1332699-1332910:-1:exon
so has part: feature:1330381-1332415:-1:exon

position:1348567:-1
position: 1348567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348096-1348567:-1:exon

position:1348096:-1
position: 1348096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1346014-1347067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345815-1345919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345567-1345696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1344814-1344960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1340024-1340118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1338264-1338386:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1337966-1338094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1333459-1333575:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1333266-1333329:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1333054-1333155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1332699-1332910:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1330381-1332415:-1:exon

LOC111959128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959128
product: probable ATP-dependent RNA helicase ddx6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_024134917.1
SIO_010081: LOC111959128
subclass of: SO_0000673
so part of: LOC111959128
location: complement(join(1332698..1332910,1333054..1333155,1333266..1333329,1333459..1333575,1337966..1338094,1338264..1338386,1340024..1340118,1344814..1344960,1345567..1345696,1345815..1345919,1346014..1347067,1348096..1348573))
location: region:1332698-1348573:-1
so has part: feature:1348096-1348573:-1:exon
so has part: feature:1346014-1347067:-1:exon
so has part: feature:1345815-1345919:-1:exon
so has part: feature:1345567-1345696:-1:exon
so has part: feature:1344814-1344960:-1:exon
so has part: feature:1340024-1340118:-1:exon
so has part: feature:1338264-1338386:-1:exon
so has part: feature:1337966-1338094:-1:exon
so has part: feature:1333459-1333575:-1:exon
so has part: feature:1333266-1333329:-1:exon
so has part: feature:1333054-1333155:-1:exon
so has part: feature:1332698-1332910:-1:exon

position:1332698:-1
position: 1332698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348573:-1
position: 1348573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348096-1348573:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1346014-1347067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345815-1345919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345567-1345696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1344814-1344960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1340024-1340118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1338264-1338386:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1337966-1338094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1333459-1333575:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1333266-1333329:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1333054-1333155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1332698-1332910:-1:exon

LOC111959128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase ddx6
translation: MSTARTENPTSIMGLNKPNGQFRGPLKPVGLTSGSLATAPQPDAHQKGGNIPQGSGGIRFGDDWKKCLQLPQKDCRFRTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPVQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAMVMVPTRELALQVSQISIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDKVQMMVMDEADKLLSQDFVVLIEDIISFLAKGRQILLYSATFPISVQKFMAKHLSKPYEINLMDELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITSEDRFNLKSIEDQLVTDIKPIPGSIDKGLYVAEFHSADPDAEDEIRGKDGELSAA
SIO_010081: LOC111959128
subclass of: SO_0000673
so part of: LOC111959128
location: complement(join(1332702..1332910,1333054..1333155,1333266..1333329,1333459..1333575,1337966..1338094,1338264..1338386,1340024..1340118,1344814..1344960,1345567..1345696,1345815..1345919,1346014..1346253))
location: region:1332702-1346253:-1
so has part: feature:1346014-1346253:-1:exon
so has part: feature:1345815-1345919:-1:exon
so has part: feature:1345567-1345696:-1:exon
so has part: feature:1344814-1344960:-1:exon
so has part: feature:1340024-1340118:-1:exon
so has part: feature:1338264-1338386:-1:exon
so has part: feature:1337966-1338094:-1:exon
so has part: feature:1333459-1333575:-1:exon
so has part: feature:1333266-1333329:-1:exon
so has part: feature:1333054-1333155:-1:exon
so has part: feature:1332702-1332910:-1:exon

XP_023836343.1
type: Protein
SIO_000068: ncbiprotein

position:1332702:-1
position: 1332702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346253:-1
position: 1346253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1346014-1346253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345815-1345919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345567-1345696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1344814-1344960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1340024-1340118:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338264-1338386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1337966-1338094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1333459-1333575:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1333266-1333329:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1333054-1333155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1332702-1332910:-1:exon

LOC111959128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase ddx6
translation: MSTARTENPTSIMGLNKPNGQFRGPLKPVGLTSGSLATAPQPDAHQKGGNIPQGSGGIRFGDDWKKCLQLPQKDCRFRTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPVQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAMVMVPTRELALQVSQISIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDKVQMMVMDEADKLLSQDFVVLIEDIISFLAKGRQILLYSATFPISVQKFMAKHLSKPYEINLMDELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITSEDRFNLKSIEDQLVTDIKPIPGSIDKGLYVAEFHSADPDAEDEIRGKDGELSAA
SIO_010081: LOC111959128
subclass of: SO_0000673
so part of: LOC111959128
location: complement(join(1332702..1332910,1333054..1333155,1333266..1333329,1333459..1333575,1337966..1338094,1338264..1338386,1340024..1340118,1344814..1344960,1345567..1345696,1345815..1345919,1346014..1346253))
location: region:1332702-1346253:-1
so has part: feature:1346014-1346253:-1:exon
so has part: feature:1345815-1345919:-1:exon
so has part: feature:1345567-1345696:-1:exon
so has part: feature:1344814-1344960:-1:exon
so has part: feature:1340024-1340118:-1:exon
so has part: feature:1338264-1338386:-1:exon
so has part: feature:1337966-1338094:-1:exon
so has part: feature:1333459-1333575:-1:exon
so has part: feature:1333266-1333329:-1:exon
so has part: feature:1333054-1333155:-1:exon
so has part: feature:1332702-1332910:-1:exon

XP_023836344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1346014-1346253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345815-1345919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345567-1345696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1344814-1344960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1340024-1340118:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338264-1338386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1337966-1338094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1333459-1333575:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1333266-1333329:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1333054-1333155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1332702-1332910:-1:exon

LOC111959128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase ddx6
translation: MSTARTENPTSIMGLNKPNGQFRGPLKPVGLTSGSLATAPQPDAHQKGGNIPQGSGGIRFGDDWKKCLQLPQKDCRFRTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPVQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAMVMVPTRELALQVSQISIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDKVQMMVMDEADKLLSQDFVVLIEDIISFLAKGRQILLYSATFPISVQKFMAKHLSKPYEINLMDELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITSEDRFNLKSIEDQLVTDIKPIPGSIDKGLYVAEFHSADPDAEDEIRGKDGELSAA
SIO_010081: LOC111959128
subclass of: SO_0000673
so part of: LOC111959128
location: complement(join(1332702..1332910,1333054..1333155,1333266..1333329,1333459..1333575,1337966..1338094,1338264..1338386,1340024..1340118,1344814..1344960,1345567..1345696,1345815..1345919,1346014..1346253))
location: region:1332702-1346253:-1
so has part: feature:1346014-1346253:-1:exon
so has part: feature:1345815-1345919:-1:exon
so has part: feature:1345567-1345696:-1:exon
so has part: feature:1344814-1344960:-1:exon
so has part: feature:1340024-1340118:-1:exon
so has part: feature:1338264-1338386:-1:exon
so has part: feature:1337966-1338094:-1:exon
so has part: feature:1333459-1333575:-1:exon
so has part: feature:1333266-1333329:-1:exon
so has part: feature:1333054-1333155:-1:exon
so has part: feature:1332702-1332910:-1:exon

XP_023990685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1346014-1346253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345815-1345919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345567-1345696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1344814-1344960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1340024-1340118:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338264-1338386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1337966-1338094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1333459-1333575:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1333266-1333329:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1333054-1333155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1332702-1332910:-1:exon

LOC111958606
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1347064..1361516)
location: region:1347064-1361516:-1
so has part: feature:1347064-1361516:-1:exon
subclass of: SO_0000010

111958606
type: Gene
SIO_000068: ncbigene

position:1347064:-1
position: 1347064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361516:-1
position: 1361516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1347064-1361516:-1:exon

LOC111958606
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958606
product: meprin A subunit beta-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024134876.1
SIO_010081: LOC111958606
subclass of: SO_0000673
so part of: LOC111958606
location: complement(join(1347064..1347067,1359823..1360053,1360144..1360288,1360476..1360556,1360849..1360994,1361127..1361516))
location: region:1347064-1361516:-1
so has part: feature:1361127-1361516:-1:exon
so has part: feature:1360849-1360994:-1:exon
so has part: feature:1360476-1360556:-1:exon
so has part: feature:1360144-1360288:-1:exon
so has part: feature:1359823-1360053:-1:exon
so has part: feature:1347064-1347067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1361127-1361516:-1:exon

position:1361127:-1
position: 1361127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1360849-1360994:-1:exon

position:1360849:-1
position: 1360849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360994:-1
position: 1360994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1360476-1360556:-1:exon

position:1360476:-1
position: 1360476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360556:-1
position: 1360556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1360144-1360288:-1:exon

position:1360144:-1
position: 1360144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360288:-1
position: 1360288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1359823-1360053:-1:exon

position:1359823:-1
position: 1359823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360053:-1
position: 1360053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1347064-1347067:-1:exon

LOC111958606
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meprin A subunit beta-like
translation: MNSALNAKGIILRAFEQFRLKSCVDFKPRGSEYHFISAQKNRGCSSHVGRSSKYGQPLSIGNYCYHIGIVEHEFLHALGIWHEQSRYDRDECHERNFVKVSHSTTLGFPYDYSSVLHDKKSISFMEHCNFDNQRLCGMSHGIFQVEFEVRKGAGLSTGGFSIDDINTPRYYSPEGYAYQIAFYLREMLFGVYVRLVSGKYDDQLQWPCHHRQVTIQLLDQNLHISITTEPSLQDGKRNSNIQYE
SIO_010081: LOC111958606
subclass of: SO_0000673
so part of: LOC111958606
location: complement(join(1347064..1347067,1359823..1360053,1360144..1360288,1360476..1360556,1360849..1360994,1361127..1361254))
location: region:1347064-1361254:-1
so has part: feature:1361127-1361254:-1:exon
so has part: feature:1360849-1360994:-1:exon
so has part: feature:1360476-1360556:-1:exon
so has part: feature:1360144-1360288:-1:exon
so has part: feature:1359823-1360053:-1:exon
so has part: feature:1347064-1347067:-1:exon

XP_023990644.1
type: Protein
SIO_000068: ncbiprotein

position:1361254:-1
position: 1361254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1361127-1361254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1360849-1360994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360476-1360556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1360144-1360288:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359823-1360053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347064-1347067:-1:exon

LOC111959109
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1374673..1376203)
location: region:1374673-1376203:-1
so has part: feature:1374673-1376203:-1:exon
subclass of: SO_0000010

111959109
type: Gene
SIO_000068: ncbigene

position:1374673:-1
position: 1374673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376203:-1
position: 1376203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374673-1376203:-1:exon

LOC111959109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959109
product: apolipoprotein A-I
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_023980553.2
SIO_010081: LOC111959109
subclass of: SO_0000673
so part of: LOC111959109
location: complement(join(1374673..1375251,1375608..1375758,1375963..1376016,1376126..1376203))
location: region:1374673-1376203:-1
so has part: feature:1376126-1376203:-1:exon
so has part: feature:1375963-1376016:-1:exon
so has part: feature:1375608-1375758:-1:exon
so has part: feature:1374673-1375251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1376126-1376203:-1:exon

position:1376126:-1
position: 1376126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1375963-1376016:-1:exon

position:1375963:-1
position: 1375963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376016:-1
position: 1376016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1375608-1375758:-1:exon

position:1375608:-1
position: 1375608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375758:-1
position: 1375758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1374673-1375251:-1:exon

position:1375251:-1
position: 1375251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111959109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-I
translation: MKVLVVLAIAILSGCHANLFYADEPKPQLEQLTDAFWDYVAKATKTADDTVQMIRKSQLGQDVNDRITESADVASQYAISLQEQLPPAAKDLMTKITQEAEVLKERLEQDLGSVKGKLEPYAEEMKTQVQQRVEQXKQDLAPYAEALDSEALRATLLQKSEELKGSLEQSVKELQSQLGPYTDELKQKVDLRLQDFQKRVAPLAENLQSQLTTRAQMVQKSLAPYAEDLKDKLDPYAQDLKAQLTALYQAFTNTN
SIO_010081: LOC111959109
subclass of: SO_0000673
so part of: LOC111959109
location: complement(join(1374675..1375251,1375608..1375758,1375963..1376002))
location: region:1374675-1376002:-1
so has part: feature:1375963-1376002:-1:exon
so has part: feature:1375608-1375758:-1:exon
so has part: feature:1374675-1375251:-1:exon

XP_023836321.1
type: Protein
SIO_000068: ncbiprotein

position:1374675:-1
position: 1374675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376002:-1
position: 1376002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1375963-1376002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375608-1375758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1374675-1375251:-1:exon

LOC111959077
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1382150..1383791
location: region:1382150-1383791:1
so has part: feature:1382150-1383791:1:exon
subclass of: SO_0000010

111959077
type: Gene
SIO_000068: ncbigene

position:1382150:1
position: 1382150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383791:1
position: 1383791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382150-1383791:1:exon

LOC111959077
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111959077
product: apolipoprotein A-IV
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_023980505.2
SIO_010081: LOC111959077
subclass of: SO_0000673
so part of: LOC111959077
location: join(1382150..1382253,1382358..1382413,1382656..1382806,1382924..1383791)
location: region:1382150-1383791:1
so has part: feature:1382150-1382253:1:exon
so has part: feature:1382358-1382413:1:exon
so has part: feature:1382656-1382806:1:exon
so has part: feature:1382924-1383791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1382150-1382253:1:exon

position:1382253:1
position: 1382253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1382358-1382413:1:exon

position:1382358:1
position: 1382358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382413:1
position: 1382413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1382656-1382806:1:exon

position:1382656:1
position: 1382656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382806:1
position: 1382806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1382924-1383791:1:exon

position:1382924:1
position: 1382924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111959077
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111959077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-IV
translation: MKVLVVLALAVFTGCHANLFYADEPKPQLEQLTDAFWDYVAKATQTADDTVQMIRKSQLGQDVNDRITESADVASQYAISLQEQLPPAAKDLMTKITQEAEVLKERLEQDLGSVKGKLEPYAEEMKTQVQQRVEQLKQDLAPYAEALDSETLRATLLQKSEELKGSLEQSVKELQSQLGPYTDELKQKVDLRLQDFQKRVAPLAENLQSQLATRAQMVQKSLAPYAEDLKDKLDPYAQDLKAQLTALYQAFTNTN
SIO_010081: LOC111959077
subclass of: SO_0000673
so part of: LOC111959077
location: join(1382374..1382413,1382656..1382806,1382924..1383500)
location: region:1382374-1383500:1
so has part: feature:1382374-1382413:1:exon
so has part: feature:1382656-1382806:1:exon
so has part: feature:1382924-1383500:1:exon

XP_023836273.1
type: Protein
SIO_000068: ncbiprotein

position:1382374:1
position: 1382374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383500:1
position: 1383500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382374-1382413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382656-1382806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382924-1383500:1:exon

LOC111959051
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1399128..1400121
location: region:1399128-1400121:1
so has part: feature:1399128-1400121:1:exon
subclass of: SO_0000011

111959051
type: Gene
SIO_000068: ncbigene

position:1399128:1
position: 1399128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400121:1
position: 1400121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399128-1400121:1:exon

LOC111959051
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111959051
product: uncharacterized LOC111959051
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XR_002876611.2
SIO_010081: LOC111959051
subclass of: SO_0000673
so part of: LOC111959051
location: join(1399128..1399298,1399898..1400121)
location: region:1399128-1400121:1
so has part: feature:1399128-1399298:1:exon
so has part: feature:1399898-1400121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1399128-1399298:1:exon

position:1399298:1
position: 1399298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1399898-1400121:1:exon

position:1399898:1
position: 1399898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958607
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1403374..1408937
location: region:1403374-1408937:1
so has part: feature:1403374-1408937:1:exon
subclass of: SO_0000010

111958607
type: Gene
SIO_000068: ncbigene

position:1403374:1
position: 1403374
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1408937:1
position: 1408937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403374-1408937:1:exon

LOC111958607
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958607
product: cell wall protein DAN4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_023979870.1
SIO_010081: LOC111958607
subclass of: SO_0000673
so part of: LOC111958607
location: join(<1403374..1403996,1404413..1404561,1408190..1408320,1408414..1408474,1408626..1408725,1408900..1408937)
location: region:1403374-1408937:1
so has part: feature:1403374-1403996:1:exon
so has part: feature:1404413-1404561:1:exon
so has part: feature:1408190-1408320:1:exon
so has part: feature:1408414-1408474:1:exon
so has part: feature:1408626-1408725:1:exon
so has part: feature:1408900-1408937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1403374-1403996:1:exon

position:1403996:1
position: 1403996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1404413-1404561:1:exon

position:1404413:1
position: 1404413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404561:1
position: 1404561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1408190-1408320:1:exon

position:1408190:1
position: 1408190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408320:1
position: 1408320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1408414-1408474:1:exon

position:1408414:1
position: 1408414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408474:1
position: 1408474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1408626-1408725:1:exon

position:1408626:1
position: 1408626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408725:1
position: 1408725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1408900-1408937:1:exon

position:1408900:1
position: 1408900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958607
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell wall protein DAN4-like
translation: YNNCCSYDHNDCSTFYNSAPTTTTTATPTTTVATTTTPPAVLSTTITTTAPATTTVASISTTAAAPTTTTAAPTTTLASTLTTAAAPTITTAAPTTAASPTTTTTPEPTTTEPTLTTAMTAESTTTTSAAHSTTTTTAISTTTVNPMTTIVGPTSINTADPTTTTPTGSSHPTTTTTAALTKTTAIVLPTSTTRTATYNSTSMTSTTRFGTVGFFVKLIFKVKTPVPTEDDVLGAVKKQLSPQFTTTQTTFQNATYIKLSDTSFAINLGFKITNVTLESLSNRLTFTNETYVQIQDSINTLLRQLLSEPNGNQFQFPSPTSLLMALKSEQT
SIO_010081: LOC111958607
subclass of: SO_0000673
so part of: LOC111958607
location: join(<1403374..1403996,1404413..1404561,1408190..1408320,1408414..1408474,1408626..1408657)
location: region:1403374-1408657:1
so has part: feature:1403374-1403996:1:exon
so has part: feature:1404413-1404561:1:exon
so has part: feature:1408190-1408320:1:exon
so has part: feature:1408414-1408474:1:exon
so has part: feature:1408626-1408657:1:exon

XP_023835638.1
type: Protein
SIO_000068: ncbiprotein

position:1408657:1
position: 1408657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403374-1403996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1404413-1404561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1408190-1408320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1408414-1408474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1408626-1408657:1:exon

LOC112067965
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1404851..1406566
location: region:1404851-1406566:1
so has part: feature:1404851-1406566:1:exon
subclass of: SO_0000011

112067965
type: Gene
SIO_000068: ncbigene

position:1404851:1
position: 1404851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1406566:1
position: 1406566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404851-1406566:1:exon

LOC112067965
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC112067965
product: uncharacterized LOC112067965
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_002893486.1
SIO_010081: LOC112067965
subclass of: SO_0000673
so part of: LOC112067965
location: join(1404851..1404881,1404974..1405035,1405185..1405284,1405444..1405531,1406127..1406272,1406461..1406566)
location: region:1404851-1406566:1
so has part: feature:1404851-1404881:1:exon
so has part: feature:1404974-1405035:1:exon
so has part: feature:1405185-1405284:1:exon
so has part: feature:1405444-1405531:1:exon
so has part: feature:1406127-1406272:1:exon
so has part: feature:1406461-1406566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1404851-1404881:1:exon

position:1404881:1
position: 1404881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1404974-1405035:1:exon

position:1404974:1
position: 1404974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405035:1
position: 1405035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1405185-1405284:1:exon

position:1405185:1
position: 1405185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405284:1
position: 1405284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1405444-1405531:1:exon

position:1405444:1
position: 1405444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405531:1
position: 1405531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1406127-1406272:1:exon

position:1406127:1
position: 1406127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1406272:1
position: 1406272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1406461-1406566:1:exon

position:1406461:1
position: 1406461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sec63
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: sec63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1466474..1494354)
location: region:1466474-1494354:-1
so has part: feature:1466474-1494354:-1:exon
subclass of: SO_0000010

111958608
type: Gene
SIO_000068: ncbigene

position:1466474:-1
position: 1466474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494354:-1
position: 1494354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466474-1494354:-1:exon

sec63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: sec63
product: SEC63 homolog, protein translocation regulator
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023979871.1
SIO_010081: sec63
subclass of: SO_0000673
so part of: sec63
location: complement(join(1466474..1466665,1467335..1467439,1467719..1467919,1468556..1468717,1469659..1469817,1469914..1469991,1470291..1470373,1470896..1471043,1471833..1471973,1473418..1473517,1476072..1476204,1480477..1480544,1483073..1483134,1486625..1486723,1494058..1494354))
location: region:1466474-1494354:-1
so has part: feature:1494058-1494354:-1:exon
so has part: feature:1486625-1486723:-1:exon
so has part: feature:1483073-1483134:-1:exon
so has part: feature:1480477-1480544:-1:exon
so has part: feature:1476072-1476204:-1:exon
so has part: feature:1473418-1473517:-1:exon
so has part: feature:1471833-1471973:-1:exon
so has part: feature:1470896-1471043:-1:exon
so has part: feature:1470291-1470373:-1:exon
so has part: feature:1469914-1469991:-1:exon
so has part: feature:1469659-1469817:-1:exon
so has part: feature:1468556-1468717:-1:exon
so has part: feature:1467719-1467919:-1:exon
so has part: feature:1467335-1467439:-1:exon
so has part: feature:1466474-1466665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1494058-1494354:-1:exon

position:1494058:-1
position: 1494058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1486625-1486723:-1:exon

position:1486625:-1
position: 1486625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486723:-1
position: 1486723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1483073-1483134:-1:exon

position:1483073:-1
position: 1483073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483134:-1
position: 1483134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1480477-1480544:-1:exon

position:1480477:-1
position: 1480477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480544:-1
position: 1480544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1476072-1476204:-1:exon

position:1476072:-1
position: 1476072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476204:-1
position: 1476204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1473418-1473517:-1:exon

position:1473418:-1
position: 1473418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473517:-1
position: 1473517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1471833-1471973:-1:exon

position:1471833:-1
position: 1471833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471973:-1
position: 1471973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1470896-1471043:-1:exon

position:1470896:-1
position: 1470896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471043:-1
position: 1471043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1470291-1470373:-1:exon

position:1470291:-1
position: 1470291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1470373:-1
position: 1470373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1469914-1469991:-1:exon

position:1469914:-1
position: 1469914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469991:-1
position: 1469991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1469659-1469817:-1:exon

position:1469659:-1
position: 1469659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469817:-1
position: 1469817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1468556-1468717:-1:exon

position:1468556:-1
position: 1468556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1468717:-1
position: 1468717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1467719-1467919:-1:exon

position:1467719:-1
position: 1467719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1467919:-1
position: 1467919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1467335-1467439:-1:exon

position:1467335:-1
position: 1467335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1467439:-1
position: 1467439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1466474-1466665:-1:exon

position:1466665:-1
position: 1466665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sec63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: sec63
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: translocation protein SEC63 homolog
translation: MAGQQFQYDDSGNTFFYFLTSFVGLIVIPATYYLWPRDQNAEQLRLKSLRKXHGRCLWYRLRLMKSQQSIIPTTKLTNDESRQNWETYGNPDGPRAPKPLSAPKPLSAPKPSALNLSNLIRELGNINVKKKEPPFCYPYSLKARVLVLAHLARMEVSDDIEEDQRFVVRKSPALLQEMVNVGCQLTMMANSRGGTHTPQVVSIENCMRLTQMIVQGLQESKSPLLQLPHFEEEHLRYCVSKKYKVRSLQDLVSLKDSDRRSMLRFLGEEKYDEVMAVLASFPSITMDTKLQVLDDEDSNNITAGSIVTVTVTLTRKRMAEVFEKEQNVTPCLGVGEEASTEDAATQGDASKTKAKVWQNKTKAAKKTKQSKKKKLTKKKPLPLPAAKAKQANGSAPGSEVIAVAKEDEEDGSDKGSESEEGEGNKDSPSERDEESDKQSDTEQDEIAGDDEEEWEALQQSIQRRERALLETKSKVTHPVYSLYYPEEKHEWWWLYIADRKDQTLVSMPYHVCTLKDTEEVELKFPAPSKTGNYQYSVILRSDSYLGLDQIRPLKLEVHEAKAVLDNHPQWDIPETEEEDEEQEDSDGIEESEEEDEDND
SIO_010081: sec63
subclass of: SO_0000673
so part of: sec63
location: complement(join(1466528..1466665,1467335..1467439,1467719..1467919,1468556..1468717,1469659..1469817,1469914..1469991,1470291..1470373,1470896..1471043,1471833..1471973,1473418..1473517,1476072..1476204,1480477..1480544,1483073..1483134,1486625..1486723,1494058..1494181))
location: region:1466528-1494181:-1
so has part: feature:1494058-1494181:-1:exon
so has part: feature:1486625-1486723:-1:exon
so has part: feature:1483073-1483134:-1:exon
so has part: feature:1480477-1480544:-1:exon
so has part: feature:1476072-1476204:-1:exon
so has part: feature:1473418-1473517:-1:exon
so has part: feature:1471833-1471973:-1:exon
so has part: feature:1470896-1471043:-1:exon
so has part: feature:1470291-1470373:-1:exon
so has part: feature:1469914-1469991:-1:exon
so has part: feature:1469659-1469817:-1:exon
so has part: feature:1468556-1468717:-1:exon
so has part: feature:1467719-1467919:-1:exon
so has part: feature:1467335-1467439:-1:exon
so has part: feature:1466528-1466665:-1:exon

XP_023835639.1
type: Protein
SIO_000068: ncbiprotein

position:1466528:-1
position: 1466528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494181:-1
position: 1494181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1494058-1494181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486625-1486723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1483073-1483134:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1480477-1480544:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1476072-1476204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1473418-1473517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1471833-1471973:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1470896-1471043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1470291-1470373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1469914-1469991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1469659-1469817:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468556-1468717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1467719-1467919:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1467335-1467439:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1466528-1466665:-1:exon

LOC111958877
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1479287..1481655
location: region:1479287-1481655:1
so has part: feature:1479287-1481655:1:exon
subclass of: SO_0000011

111958877
type: Gene
SIO_000068: ncbigene

position:1479287:1
position: 1479287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481655:1
position: 1481655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479287-1481655:1:exon

LOC111958877
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111958877
product: uncharacterized LOC111958877
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XR_002876586.1
SIO_010081: LOC111958877
subclass of: SO_0000673
so part of: LOC111958877
location: join(1479287..1479373,1481235..1481342,1481567..1481655)
location: region:1479287-1481655:1
so has part: feature:1479287-1479373:1:exon
so has part: feature:1481235-1481342:1:exon
so has part: feature:1481567-1481655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479287-1479373:1:exon

position:1479373:1
position: 1479373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481235-1481342:1:exon

position:1481235:1
position: 1481235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481342:1
position: 1481342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1481567-1481655:1:exon

position:1481567:1
position: 1481567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

iyd
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: iyd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1497137..1513379)
location: region:1497137-1513379:-1
so has part: feature:1497137-1513379:-1:exon
subclass of: SO_0000010

111959178
type: Gene
SIO_000068: ncbigene

position:1497137:-1
position: 1497137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513379:-1
position: 1513379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1497137-1513379:-1:exon

iyd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: iyd
product: iodotyrosine deiodinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_023980660.1
SIO_010081: iyd
subclass of: SO_0000673
so part of: iyd
location: complement(join(1497137..1497801,1503998..1504154,1505902..1506061,1506320..1506517,1513089..1513379))
location: region:1497137-1513379:-1
so has part: feature:1513089-1513379:-1:exon
so has part: feature:1506320-1506517:-1:exon
so has part: feature:1505902-1506061:-1:exon
so has part: feature:1503998-1504154:-1:exon
so has part: feature:1497137-1497801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1513089-1513379:-1:exon

position:1513089:-1
position: 1513089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1506320-1506517:-1:exon

position:1506320:-1
position: 1506320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506517:-1
position: 1506517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1505902-1506061:-1:exon

position:1505902:-1
position: 1505902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506061:-1
position: 1506061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1503998-1504154:-1:exon

position:1503998:-1
position: 1503998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504154:-1
position: 1504154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1497137-1497801:-1:exon

position:1497801:-1
position: 1497801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

iyd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: iyd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iodotyrosine deiodinase 1
translation: MALLSTLTPVFVAVLCVILVFLFKSSQKKKDNKAVKPEWKPKAEARPWVDEDLQDDTEIRHKDEEDGDWVESGGEEELAHVPYPASRYPVEVMVQRSQDFYSLMNQRRSVRFLSPEPVPRQVIDNVIRTAGTAPSGAHTEPWTFVVVSDPEVKHQIRLVVEEEEEVNYRQRMGDKWVSDLQRLRTNWVKQYLDVAPYLVLIFKQTYGIVAGGQKRTHYYNEISVSISCGLLLAALQNAGLVTVTTTPLNCGPQLRLLLGRPANEKLLMLLPVGYPAPDATVPDLTRKPLDDILVHL
SIO_010081: iyd
subclass of: SO_0000673
so part of: iyd
location: complement(join(1497619..1497801,1503998..1504154,1505902..1506061,1506320..1506517,1513089..1513281))
location: region:1497619-1513281:-1
so has part: feature:1513089-1513281:-1:exon
so has part: feature:1506320-1506517:-1:exon
so has part: feature:1505902-1506061:-1:exon
so has part: feature:1503998-1504154:-1:exon
so has part: feature:1497619-1497801:-1:exon

XP_023836428.1
type: Protein
SIO_000068: ncbiprotein

position:1497619:-1
position: 1497619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513281:-1
position: 1513281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513089-1513281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1506320-1506517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1505902-1506061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1503998-1504154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497619-1497801:-1:exon

LOC111958609
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1588242..>1590967)
location: region:1588242-1590967:-1
so has part: feature:1588242-1590967:-1:exon
subclass of: SO_0000010

111958609
type: Gene
SIO_000068: ncbigene

position:1588242:-1
position: 1588242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590967:-1
position: 1590967
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588242-1590967:-1:exon

LOC111958609
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958609
product: clusterin-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023979872.1
SIO_010081: LOC111958609
subclass of: SO_0000673
so part of: LOC111958609
location: complement(join(1588242..1588487,1588591..1588769,1589913..1590044,1590125..1590207,1590305..1590427,1590673..>1590967))
location: region:1588242-1590967:-1
so has part: feature:1590673-1590967:-1:exon
so has part: feature:1590305-1590427:-1:exon
so has part: feature:1590125-1590207:-1:exon
so has part: feature:1589913-1590044:-1:exon
so has part: feature:1588591-1588769:-1:exon
so has part: feature:1588242-1588487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1590673-1590967:-1:exon

position:1590673:-1
position: 1590673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1590305-1590427:-1:exon

position:1590305:-1
position: 1590305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590427:-1
position: 1590427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1590125-1590207:-1:exon

position:1590125:-1
position: 1590125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590207:-1
position: 1590207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1589913-1590044:-1:exon

position:1589913:-1
position: 1589913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590044:-1
position: 1590044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1588591-1588769:-1:exon

position:1588591:-1
position: 1588591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1588769:-1
position: 1588769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1588242-1588487:-1:exon

position:1588487:-1
position: 1588487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958609
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clusterin-like protein 1
translation: VGSLFERSVVLVDKLQGKLDQDLQKAFDPQSRGQARGQQPTQDPFSLGMDLGFIHRVGLEEVLDSFFNFGKSVVEDFGDVVTRVFDDLKDVVEEERKREGKLFPPFLQNMKLCRELRRQTSECWQLQNQCQSCQGVLLTECPSVRELHVELDEKTQLRDMSKEQYDEVLSIVQQHTSDTVSWISNMASEFSWVTEMVNNTTTPDTIFRIRKVVSEGVDGGSSSRGDTKVELNILNSPPLLLTIPADVELQDPAFIRFLAQEALGMYKQMFRHIDD
SIO_010081: LOC111958609
subclass of: SO_0000673
so part of: LOC111958609
location: complement(join(1588472..1588487,1588591..1588769,1589913..1590044,1590125..1590207,1590305..1590427,1590673..>1590967))
location: region:1588472-1590967:-1
so has part: feature:1590673-1590967:-1:exon
so has part: feature:1590305-1590427:-1:exon
so has part: feature:1590125-1590207:-1:exon
so has part: feature:1589913-1590044:-1:exon
so has part: feature:1588591-1588769:-1:exon
so has part: feature:1588472-1588487:-1:exon

XP_023835640.1
type: Protein
SIO_000068: ncbiprotein

position:1588472:-1
position: 1588472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1590673-1590967:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590305-1590427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1590125-1590207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1589913-1590044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1588591-1588769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1588472-1588487:-1:exon

LOC111959108
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111959108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1591041..1602202)
location: region:1591041-1602202:-1
so has part: feature:1591041-1602202:-1:exon
subclass of: SO_0000011

111959108
type: Gene
SIO_000068: ncbigene

position:1591041:-1
position: 1591041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1602202:-1
position: 1602202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1591041-1602202:-1:exon

LOC111959108
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111959108
product: uncharacterized LOC111959108
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002876618.1
SIO_010081: LOC111959108
subclass of: SO_0000673
so part of: LOC111959108
location: complement(join(1591041..1591065,1591145..1591272,1601910..1602202))
location: region:1591041-1602202:-1
so has part: feature:1601910-1602202:-1:exon
so has part: feature:1591145-1591272:-1:exon
so has part: feature:1591041-1591065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1601910-1602202:-1:exon

position:1601910:-1
position: 1601910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1591145-1591272:-1:exon

position:1591145:-1
position: 1591145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591272:-1
position: 1591272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1591041-1591065:-1:exon

position:1591065:-1
position: 1591065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111958610
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1629732..1652389
location: region:1629732-1652389:1
so has part: feature:1629732-1652389:1:exon
subclass of: SO_0000010

111958610
type: Gene
SIO_000068: ncbigene

position:1629732:1
position: 1629732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652389:1
position: 1652389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1652389:1:exon

LOC111958610
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958610
product: collectin-12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_023979873.1
SIO_010081: LOC111958610
subclass of: SO_0000673
so part of: LOC111958610
location: join(1629732..1629786,1639725..1639847,1651821..1651907,1652028..1652389)
location: region:1629732-1652389:1
so has part: feature:1629732-1629786:1:exon
so has part: feature:1639725-1639847:1:exon
so has part: feature:1651821-1651907:1:exon
so has part: feature:1652028-1652389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629786:1:exon

position:1629786:1
position: 1629786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1639725-1639847:1:exon

position:1639725:1
position: 1639725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1639847:1
position: 1639847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1651821-1651907:1:exon

position:1651821:1
position: 1651821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651907:1
position: 1651907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1652028-1652389:1:exon

position:1652028:1
position: 1652028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collectin-12-like
translation: MQNYGGKVTAVETDLKKLDDQTGEKADNASSDISTFKSDIQTLQSQLDNVSQRASTNRAVLNQLQVTGEDMQSSQASLQSLLDSSTASLHSVNTTLASYGGIIGGLQTDSTRLQDRLQGQVREQGRHGLVSVKNKNTF
SIO_010081: LOC111958610
subclass of: SO_0000673
so part of: LOC111958610
location: join(1651853..1651907,1652028..1652389)
location: region:1651853-1652389:1
so has part: feature:1651853-1651907:1:exon
so has part: feature:1652028-1652389:1:exon

XP_023835641.1
type: Protein
SIO_000068: ncbiprotein

position:1651853:1
position: 1651853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651853-1651907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1652028-1652389:1:exon

LOC111958982
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1660906..1667102
location: region:1660906-1667102:1
so has part: feature:1660906-1667102:1:exon
subclass of: SO_0000011

111958982
type: Gene
SIO_000068: ncbigene

position:1660906:1
position: 1660906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667102:1
position: 1667102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660906-1667102:1:exon

LOC111958982
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111958982
product: uncharacterized LOC111958982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002876603.1
SIO_010081: LOC111958982
subclass of: SO_0000673
so part of: LOC111958982
location: join(1660906..1661010,1666809..1666893,1667011..1667102)
location: region:1660906-1667102:1
so has part: feature:1660906-1661010:1:exon
so has part: feature:1666809-1666893:1:exon
so has part: feature:1667011-1667102:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1660906-1661010:1:exon

position:1661010:1
position: 1661010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1666809-1666893:1:exon

position:1666809:1
position: 1666809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666893:1
position: 1666893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1667011-1667102:1:exon

position:1667011:1
position: 1667011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958611
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111958611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1667164..>1695596
location: region:1667164-1695596:1
so has part: feature:1667164-1695596:1:exon
subclass of: SO_0000010

111958611
type: Gene
SIO_000068: ncbigene

position:1667164:1
position: 1667164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695596:1
position: 1695596
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1667164-1695596:1:exon

LOC111958611
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111958611
product: collectin-12
inference: similar to RNA sequence (same species):INSD:GGAP01030730.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 501 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023979874.1
SIO_010081: LOC111958611
subclass of: SO_0000673
so part of: LOC111958611
location: join(1667164..1667337,1685026..1685142,1685268..1685865,1694963..>1695596)
location: region:1667164-1695596:1
so has part: feature:1667164-1667337:1:exon
so has part: feature:1685026-1685142:1:exon
so has part: feature:1685268-1685865:1:exon
so has part: feature:1694963-1695596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1667164-1667337:1:exon

position:1667337:1
position: 1667337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1685026-1685142:1:exon

position:1685026:1
position: 1685026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685142:1
position: 1685142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1685268-1685865:1:exon

position:1685268:1
position: 1685268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685865:1
position: 1685865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1694963-1695596:1:exon

position:1694963:1
position: 1694963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111958611
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111958611
inference: similar to RNA sequence (same species):INSD:GGAP01030730.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 400 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collectin-12
translation: MQSSRRPYRVYWTQHCLTTQCQHYPGLIWRDNRRAADRFPPGCRTDSRRQVREQGQTQVDISSLNRTQAQQGRLLSALQRSVEDAGQAVQRLKNNFHGLQQTARQTQADTDWLREKVQNLQVLTANNSALAQSNGEVLEDMGLQLNTLINQTKNTSFLTEGHNQSLRLFKDQQKDHKNTTSSRFDEMEARLNSHEGDINRVTGNFSFANQLLGIISSELNSLRTCAETVTHHSDLLLGLNGSVAEVRGDGLELQAQQDELTDRLDREVNSLSLFMEEMKMVDRKQSQLISNFTILQGPPGPRGARGDKGLQGPIGQQGQKGERGDKGVAGVQGPRGEKGSDGPPGVAGLNGPPGALGTLGPKGYRGSGGRLGTSGEKGEPGAQGLVGRDGQAGPQGAQGPQGARGQDGSSGTEGPRGLVGPIGPPGPPGLPGLPFQVVLPPVVTNSPIMVQTPRIEPDEPGQPEEPDKREQRREPPVQPKESVVPAVEPKASVSRQVQPSRSTTPAPGCPSHWSDFSSRCYFFSSGLQRLNFDEAHDFCSNMTSSMIVVRDLEEQQWVRKQIAGKGYFWLGLTDREDENVWKWVDGTLPVFTKWKPGQPDNWSHGHEEGEDCAGLIHEANWNDFFCTDRIGFICQRAYAC
SIO_010081: LOC111958611
subclass of: SO_0000673
so part of: LOC111958611
location: join(1667164..1667337,1685026..1685142,1685268..1685865,1694963..>1695596)
location: region:1667164-1695596:1
so has part: feature:1667164-1667337:1:exon
so has part: feature:1685026-1685142:1:exon
so has part: feature:1685268-1685865:1:exon
so has part: feature:1694963-1695596:1:exon

XP_023835642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1667164-1667337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1685026-1685142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1685268-1685865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1694963-1695596:1:exon

LOC112067962
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1733401..1737596)
location: region:1733401-1737596:-1
so has part: feature:1733401-1737596:-1:exon
subclass of: SO_0000010

112067962
type: Gene
SIO_000068: ncbigene

position:1733401:-1
position: 1733401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737596:-1
position: 1737596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1733401-1737596:-1:exon

LOC112067962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC112067962
product: uncharacterized LOC112067962
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_024134908.1
SIO_010081: LOC112067962
subclass of: SO_0000673
so part of: LOC112067962
location: complement(join(1733401..1733729,1734623..1734827,1735173..1735294,1737442..1737596))
location: region:1733401-1737596:-1
so has part: feature:1737442-1737596:-1:exon
so has part: feature:1735173-1735294:-1:exon
so has part: feature:1734623-1734827:-1:exon
so has part: feature:1733401-1733729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1737442-1737596:-1:exon

position:1737442:-1
position: 1737442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1735173-1735294:-1:exon

position:1735173:-1
position: 1735173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735294:-1
position: 1735294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1734623-1734827:-1:exon

position:1734623:-1
position: 1734623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1734827:-1
position: 1734827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1733401-1733729:-1:exon