Salvelinus alpinus isolate IW2-2015 linkage group LG25, ASM291031v2, whole genome shotgun sequence.
type: Entry
definition: Salvelinus alpinus isolate IW2-2015 linkage group LG25, ASM291031v2, whole genome shotgun sequence.
sequence version: NC_036865.1
sequence date: 2018-02-25
sequence: sequence
division: CON
label: NC_036865.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA433373
dblink: SAMN06561764
keyword: WGS
keyword: RefSeq
source: Salvelinus alpinus (Arctic char)
organism: Salvelinus alpinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM009416.1.\nAssembly name: ASM291031v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Victoria on\n2018/02/02. The original whole-genome shotgun project has the\naccession PPUY00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Victoria\nAssembly Date :: OCT-2017\nAssembly Method :: AllPaths v. 52488; PBSuite v. 15.8.24;\n SSpace-LongRead v. 1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 146.0x\nSequencing Technology :: Illumina Paired-End; Illumina Mate-Pair;\n PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Salvelinus alpinus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 26198113
topology: linear
so has quality: SO_0000987
location: 1..26198113
location: region:1-26198113:1
RO_0002162: 8036

NC_036865
type: RefSeq
SIO_000068: refseq

PRJNA433373
type: BioProject
SIO_000068: bioproject

SAMN06561764
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26198113:1
position: 26198113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26198113:1:source
so part of: sequence
organism: Salvelinus alpinus
mol type: genomic DNA
isolate: IW2-2015
tissue type: liver
dev stage: juvenile
collected by: Jon Lucas
linkage group: LG25

8036
type: Taxonomy
SIO_000068: taxonomy

LOC111951837
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21721..30358
location: region:21721-30358:1
so has part: feature:21721-30358:1:exon
subclass of: SO_0000010

111951837
type: Gene
SIO_000068: ncbigene

position:21721:1
position: 21721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30358:1
position: 30358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21721-30358:1:exon

LOC111951837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951837
product: eukaryotic translation initiation factor 3 subunit L-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023970081.1
SIO_010081: LOC111951837
subclass of: SO_0000673
so part of: LOC111951837
location: join(21721..21963,22288..22330,22525..22735,22829..22908,23300..23361,23548..23617,23727..23800,24021..24192,24468..24622,26126..26296,28274..28407,28767..28940,29268..29457,29595..29675,29903..30358)
location: region:21721-30358:1
so has part: feature:21721-21963:1:exon
so has part: feature:22288-22330:1:exon
so has part: feature:22525-22735:1:exon
so has part: feature:22829-22908:1:exon
so has part: feature:23300-23361:1:exon
so has part: feature:23548-23617:1:exon
so has part: feature:23727-23800:1:exon
so has part: feature:24021-24192:1:exon
so has part: feature:24468-24622:1:exon
so has part: feature:26126-26296:1:exon
so has part: feature:28274-28407:1:exon
so has part: feature:28767-28940:1:exon
so has part: feature:29268-29457:1:exon
so has part: feature:29595-29675:1:exon
so has part: feature:29903-30358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21721-21963:1:exon

position:21963:1
position: 21963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22288-22330:1:exon

position:22288:1
position: 22288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22330:1
position: 22330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22525-22735:1:exon

position:22525:1
position: 22525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22735:1
position: 22735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22829-22908:1:exon

position:22829:1
position: 22829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22908:1
position: 22908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23300-23361:1:exon

position:23300:1
position: 23300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23361:1
position: 23361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:23548-23617:1:exon

position:23548:1
position: 23548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23617:1
position: 23617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:23727-23800:1:exon

position:23727:1
position: 23727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23800:1
position: 23800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:24021-24192:1:exon

position:24021:1
position: 24021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24192:1
position: 24192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:24468-24622:1:exon

position:24468:1
position: 24468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24622:1
position: 24622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:26126-26296:1:exon

position:26126:1
position: 26126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26296:1
position: 26296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:28274-28407:1:exon

position:28274:1
position: 28274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28407:1
position: 28407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:28767-28940:1:exon

position:28767:1
position: 28767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28940:1
position: 28940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:29268-29457:1:exon

position:29268:1
position: 29268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29457:1
position: 29457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:29595-29675:1:exon

position:29595:1
position: 29595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29675:1
position: 29675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:29903-30358:1:exon

position:29903:1
position: 29903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951837
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:22560..22562,aa:OTHER)
product: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit L-like
translation: MSYPTEETEEYDPYSYTNDDYLHTGDPKADLAYERQXEQQTYHVIPEVIKNFLQYFHKTISDLIDQKVYELQANRVSSESIEQKIYEIQDVYENSWNKLTDRFFKTSPWPEAEAIASLVGNDAVFLILYKELYYRHIYAKVSGGPTLDQRFESYYNYCNLFNYILNADGPAPLELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIEFLRNNPKIWNVHSVLNVLHSLVDKSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVGLLRLHSLLGDYYQAIKVLENIELNKKSMYSRVPECQITTYYYVGFAYLMMRRYQDAIRVFANILLYIQRTRNMFQRSTYKYEMINKQNEQMHGLLAIALTMYPMRIDESIHTQLREKYGDKMLRMQKGDLQVFEELFSFACPKFLSPVVPNYDNVHPNYHKEPFQQQLKVFAEEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDMTEQEFRIQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLKKMAMSGASTTATTTTRAT
SIO_010081: LOC111951837
subclass of: SO_0000673
so part of: LOC111951837
location: join(21934..21963,22288..22330,22525..22735,22829..22908,23300..23361,23548..23617,23727..23800,24021..24192,24468..24622,26126..26296,28274..28407,28767..28940,29268..29457,29595..29675,29903..29977)
location: region:21934-29977:1
so has part: feature:21934-21963:1:exon
so has part: feature:22288-22330:1:exon
so has part: feature:22525-22735:1:exon
so has part: feature:22829-22908:1:exon
so has part: feature:23300-23361:1:exon
so has part: feature:23548-23617:1:exon
so has part: feature:23727-23800:1:exon
so has part: feature:24021-24192:1:exon
so has part: feature:24468-24622:1:exon
so has part: feature:26126-26296:1:exon
so has part: feature:28274-28407:1:exon
so has part: feature:28767-28940:1:exon
so has part: feature:29268-29457:1:exon
so has part: feature:29595-29675:1:exon
so has part: feature:29903-29977:1:exon

XP_023825849.1
type: Protein
SIO_000068: ncbiprotein

position:21934:1
position: 21934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29977:1
position: 29977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21934-21963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22288-22330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22525-22735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22829-22908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23300-23361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23548-23617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23727-23800:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24021-24192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24468-24622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26126-26296:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28274-28407:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:28767-28940:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:29268-29457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29595-29675:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:29903-29977:1:exon

LOC111951670
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(32448..120651)
location: region:32448-120651:-1
so has part: feature:32448-120651:-1:exon
subclass of: SO_0000010

111951670
type: Gene
SIO_000068: ncbigene

position:32448:-1
position: 32448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120651:-1
position: 120651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32448-120651:-1:exon

LOC111951670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951670
product: cadherin-23-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023969883.1
SIO_010081: LOC111951670
subclass of: SO_0000673
so part of: LOC111951670
location: complement(join(32448..33181,33563..33673,33849..33968,34545..34674,34907..34967,35141..35181,35456..35656,35915..36012,36159..36415,38260..38421,38604..38867,39091..39220,41435..41548,41939..42133,42361..42572,42777..42954,44103..44222,70678..70815,71417..71586,83340..83564,98735..98851,99111..99569,102860..103063,103255..103380,103672..103774,109657..109764,110091..110300,110519..110652,120597..120651))
location: region:32448-120651:-1
so has part: feature:120597-120651:-1:exon
so has part: feature:110519-110652:-1:exon
so has part: feature:110091-110300:-1:exon
so has part: feature:109657-109764:-1:exon
so has part: feature:103672-103774:-1:exon
so has part: feature:103255-103380:-1:exon
so has part: feature:102860-103063:-1:exon
so has part: feature:99111-99569:-1:exon
so has part: feature:98735-98851:-1:exon
so has part: feature:83340-83564:-1:exon
so has part: feature:71417-71586:-1:exon
so has part: feature:70678-70815:-1:exon
so has part: feature:44103-44222:-1:exon
so has part: feature:42777-42954:-1:exon
so has part: feature:42361-42572:-1:exon
so has part: feature:41939-42133:-1:exon
so has part: feature:41435-41548:-1:exon
so has part: feature:39091-39220:-1:exon
so has part: feature:38604-38867:-1:exon
so has part: feature:38260-38421:-1:exon
so has part: feature:36159-36415:-1:exon
so has part: feature:35915-36012:-1:exon
so has part: feature:35456-35656:-1:exon
so has part: feature:35141-35181:-1:exon
so has part: feature:34907-34967:-1:exon
so has part: feature:34545-34674:-1:exon
so has part: feature:33849-33968:-1:exon
so has part: feature:33563-33673:-1:exon
so has part: feature:32448-33181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120597-120651:-1:exon

position:120597:-1
position: 120597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110519-110652:-1:exon

position:110519:-1
position: 110519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110652:-1
position: 110652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110091-110300:-1:exon

position:110091:-1
position: 110091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110300:-1
position: 110300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:109657-109764:-1:exon

position:109657:-1
position: 109657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109764:-1
position: 109764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:103672-103774:-1:exon

position:103672:-1
position: 103672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103774:-1
position: 103774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:103255-103380:-1:exon

position:103255:-1
position: 103255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103380:-1
position: 103380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:102860-103063:-1:exon

position:102860:-1
position: 102860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103063:-1
position: 103063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:99111-99569:-1:exon

position:99111:-1
position: 99111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99569:-1
position: 99569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:98735-98851:-1:exon

position:98735:-1
position: 98735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98851:-1
position: 98851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:83340-83564:-1:exon

position:83340:-1
position: 83340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83564:-1
position: 83564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:71417-71586:-1:exon

position:71417:-1
position: 71417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71586:-1
position: 71586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:70678-70815:-1:exon

position:70678:-1
position: 70678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70815:-1
position: 70815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:44103-44222:-1:exon

position:44103:-1
position: 44103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44222:-1
position: 44222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:42777-42954:-1:exon

position:42777:-1
position: 42777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42954:-1
position: 42954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:42361-42572:-1:exon

position:42361:-1
position: 42361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42572:-1
position: 42572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:41939-42133:-1:exon

position:41939:-1
position: 41939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42133:-1
position: 42133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:41435-41548:-1:exon

position:41435:-1
position: 41435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41548:-1
position: 41548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:39091-39220:-1:exon

position:39091:-1
position: 39091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39220:-1
position: 39220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:38604-38867:-1:exon

position:38604:-1
position: 38604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38867:-1
position: 38867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:38260-38421:-1:exon

position:38260:-1
position: 38260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38421:-1
position: 38421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:36159-36415:-1:exon

position:36159:-1
position: 36159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36415:-1
position: 36415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:35915-36012:-1:exon

position:35915:-1
position: 35915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36012:-1
position: 36012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:35456-35656:-1:exon

position:35456:-1
position: 35456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35656:-1
position: 35656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:35141-35181:-1:exon

position:35141:-1
position: 35141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35181:-1
position: 35181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:34907-34967:-1:exon

position:34907:-1
position: 34907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34967:-1
position: 34967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:34545-34674:-1:exon

position:34545:-1
position: 34545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34674:-1
position: 34674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:33849-33968:-1:exon

position:33849:-1
position: 33849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33968:-1
position: 33968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:33563-33673:-1:exon

position:33563:-1
position: 33563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33673:-1
position: 33673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:32448-33181:-1:exon

position:33181:-1
position: 33181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-23-like
translation: MGSGRGDSAAFGDSQGNSDEFVISPVEGELRVRRDVELDRETTPFYNITVMAKDLGKPPRSSMVVVGVHVLDINDNDPVLINLPHNTSVSEGASVYTLVARVRAQDVDSGRNALLTYNITAGNRDGAFYINDTTGVVQVNRPLDRERVGEYRLTITVKDNPENPRIARRDSELLVITVLDENDNRPIFTQTSYRAEITENSPTDSAVLVLNGPVLAEDKDIGPNAVVRYHLLGTRQDLFTVDSDTGVVRVRQAALLDREMFVEPRVELFLVGEDVWGLNSSVPLTVTILDQNDNPPVFKPPSLTVHLPENSPTGVVVTQLSASDADSGSNAWLLYRLESGAQDRFIVDSLSGAVLVGNAILDREERGSYRLVILATDRGTPSLSGTVTLSVILDDVNDSRPRFIEPVTTINVNESTPPGVVVATLAAEDHDLRPRLEYYIISVEAKDDGNNPVDGLQESFGIDFHTGAVFVHNPLNRELVATFEILVSVHDNASDVIDMSVSVPNARLTVNVLDVNDNAPRFRPFGVANFSEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLHLPRGDYLRLEDPSTGKIVANRTVDFEQVQWLNFTVRAQDHGSPPRVAELPVYLRIVDINDNKPIFTQPSYQKPVFEDVDLGTVIVTVSATDADSGLFSAIEYGLVDGEGKFGITPSTGDIYILSPLDRETKDHYTLTAIARDNPGGSPNNRREKSVQVLVTVLDVNDFRPRFSERIFETSVFENEPSGTSVITLTANDLDEGENGLLYYSLQGPGADAFSLEADTGLVRSLRLLQSFECFNLTVVATDQGKPPLWGTATLHIIIIDVNDNRPMFVRPTNGTIMHIMEEQAPGLLVYEVFATDGDDGVNGEVRYAFLQTGARNRDWENFHIDAITGVITTAXKLDREKQALHSLIVVAYDLGQPVPYETTQPLQVALLDIDDNEPVFFKPPRGSLPYQTLSVAEHSTPGTVVGNVKGAVDADEGSNAVVYYFIAGGDTEGNFGLSPGGILKVKKDLDREDISVYSIIVKASSHRNWVPPRDRRSARGSVLDPSHDATLQEIRIYLEDINDQPPRFTKLEYTAGVAADAKVGSDLIRVQAIDNDIGNNSLVLYHVLSIRYIKLQSNDSEDIGNVFIIGETDGIIRTFDLFTAYDPGYFMVEVFARDLAGHSDIAMVDIYILRDDQRVKIIINEIPERVQQFQEEFINLLSNITRAIVNTDDVQFHVDKKGRVNFAQTDVLIHVVNKQTNRILDVEKVIQMIDENKDQLRNLFRNYNIMDVQPAISRRAPDDLTTLQMAIIILAVLLFLAAMLFIFTNWYYRTVHKRKLKAIVAGSTGNHGLMDILDMPNTNIYSFEGANPVWLDPFCRNLELAAQAEHEEDLPVNLSEITDLWNSPARTHGTFGREPQAKPEDDRYLRAAIQEYDNVAKLGQIMREGPIKGSLLNGVLDNYLRLKKLFAARLVTKSTSQCDQSSVTELIQSDLDDDEDDRVAMGDSWGTLRFRHKLPVEMRGPDGVHSSTGTLLTSDLNSLPEDDQRALAGSTEALNVTDGGLYAERNTRTESAKSTPLHRNNKDTDMLNESPLEITEL
SIO_010081: LOC111951670
subclass of: SO_0000673
so part of: LOC111951670
location: complement(join(32843..33181,33563..33673,33849..33968,34545..34674,34907..34967,35141..35181,35456..35656,35915..36012,36159..36415,38260..38421,38604..38867,39091..39220,41435..41548,41939..42133,42361..42572,42777..42954,44103..44222,70678..70815,71417..71586,83340..83564,98735..98851,99111..99569,102860..103063,103255..103380,103672..103774,109657..109764,110091..110300,110519..110652,120597..120651))
location: region:32843-120651:-1
so has part: feature:120597-120651:-1:exon
so has part: feature:110519-110652:-1:exon
so has part: feature:110091-110300:-1:exon
so has part: feature:109657-109764:-1:exon
so has part: feature:103672-103774:-1:exon
so has part: feature:103255-103380:-1:exon
so has part: feature:102860-103063:-1:exon
so has part: feature:99111-99569:-1:exon
so has part: feature:98735-98851:-1:exon
so has part: feature:83340-83564:-1:exon
so has part: feature:71417-71586:-1:exon
so has part: feature:70678-70815:-1:exon
so has part: feature:44103-44222:-1:exon
so has part: feature:42777-42954:-1:exon
so has part: feature:42361-42572:-1:exon
so has part: feature:41939-42133:-1:exon
so has part: feature:41435-41548:-1:exon
so has part: feature:39091-39220:-1:exon
so has part: feature:38604-38867:-1:exon
so has part: feature:38260-38421:-1:exon
so has part: feature:36159-36415:-1:exon
so has part: feature:35915-36012:-1:exon
so has part: feature:35456-35656:-1:exon
so has part: feature:35141-35181:-1:exon
so has part: feature:34907-34967:-1:exon
so has part: feature:34545-34674:-1:exon
so has part: feature:33849-33968:-1:exon
so has part: feature:33563-33673:-1:exon
so has part: feature:32843-33181:-1:exon

XP_023825651.1
type: Protein
SIO_000068: ncbiprotein

position:32843:-1
position: 32843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120597-120651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110519-110652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110091-110300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109657-109764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103672-103774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103255-103380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102860-103063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99111-99569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98735-98851:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83340-83564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:71417-71586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70678-70815:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44103-44222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42777-42954:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:42361-42572:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41939-42133:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:41435-41548:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:39091-39220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:38604-38867:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:38260-38421:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:36159-36415:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:35915-36012:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:35456-35656:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:35141-35181:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:34907-34967:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:34545-34674:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:33849-33968:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:33563-33673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:32843-33181:-1:exon

LOC111951656
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135919..146436)
location: region:135919-146436:-1
so has part: feature:135919-146436:-1:exon
subclass of: SO_0000011

111951656
type: Gene
SIO_000068: ncbigene

position:135919:-1
position: 135919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146436:-1
position: 146436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135919-146436:-1:exon

LOC111951656
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111951656
product: uncharacterized LOC111951656
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002875636.1
SIO_010081: LOC111951656
subclass of: SO_0000673
so part of: LOC111951656
location: complement(join(135919..136081,136366..136485,146228..146436))
location: region:135919-146436:-1
so has part: feature:146228-146436:-1:exon
so has part: feature:136366-136485:-1:exon
so has part: feature:135919-136081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146228-146436:-1:exon

position:146228:-1
position: 146228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136366-136485:-1:exon

position:136366:-1
position: 136366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136485:-1
position: 136485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135919-136081:-1:exon

position:136081:-1
position: 136081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

vsir
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: vsir
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 148150..177427
location: region:148150-177427:1
so has part: feature:148150-177427:1:exon
subclass of: SO_0000010

111951654
type: Gene
SIO_000068: ncbigene

position:148150:1
position: 148150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177427:1
position: 177427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148150-177427:1:exon

vsir
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: vsir
product: V-set immunoregulatory receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_023969868.1
SIO_010081: vsir
subclass of: SO_0000673
so part of: vsir
location: join(148150..148477,168599..169000,169219..169269,170169..170279,170441..170468,170890..171074,175903..177427)
location: region:148150-177427:1
so has part: feature:148150-148477:1:exon
so has part: feature:168599-169000:1:exon
so has part: feature:169219-169269:1:exon
so has part: feature:170169-170279:1:exon
so has part: feature:170441-170468:1:exon
so has part: feature:170890-171074:1:exon
so has part: feature:175903-177427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148150-148477:1:exon

position:148477:1
position: 148477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168599-169000:1:exon

position:168599:1
position: 168599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169000:1
position: 169000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:169219-169269:1:exon

position:169219:1
position: 169219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169269:1
position: 169269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170169-170279:1:exon

position:170169:1
position: 170169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170279:1
position: 170279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170441-170468:1:exon

position:170441:1
position: 170441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170468:1
position: 170468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170890-171074:1:exon

position:170890:1
position: 170890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171074:1
position: 171074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:175903-177427:1:exon

position:175903:1
position: 175903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vsir
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: vsir
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type immunoglobulin domain-containing suppressor of T-cell activation
translation: MTWELYSRETLRIHLLLRFLLYFHLATVVGANGDVAHPHTRLTVTAPHLSYICEKGANVTLLCAQRGAKLXPLDRLHQSWLFTPHSAEHCHDKVHPRAHNHKGNYSRAALPWGVQYGSSEESFWVQLQLVTESDQGRYCCLSLDINNGKVVQRTHSHVFLTITPWKSDEAKCTQLDIKPSEGSVTAGLATAACIMAILSLPLILVLVYKQRQSAQSSRRAHELVRMDSEAAGHENPVFLGGSPPGQAKTRTVSQIMTRQSSETGRHLLLSDPGTPLSPPVHGVVFFPEQEPVLESPDFLQM
SIO_010081: vsir
subclass of: SO_0000673
so part of: vsir
location: join(148387..148477,168599..169000,169219..169269,170169..170279,170441..170468,170890..171074,175903..175940)
location: region:148387-175940:1
so has part: feature:148387-148477:1:exon
so has part: feature:168599-169000:1:exon
so has part: feature:169219-169269:1:exon
so has part: feature:170169-170279:1:exon
so has part: feature:170441-170468:1:exon
so has part: feature:170890-171074:1:exon
so has part: feature:175903-175940:1:exon

XP_023825636.1
type: Protein
SIO_000068: ncbiprotein

position:148387:1
position: 148387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175940:1
position: 175940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148387-148477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168599-169000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169219-169269:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170169-170279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170441-170468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170890-171074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175903-175940:1:exon

LOC111951655
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(187249..189087)
location: region:187249-189087:-1
so has part: feature:187249-189087:-1:exon
subclass of: SO_0000010

111951655
type: Gene
SIO_000068: ncbigene

position:187249:-1
position: 187249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189087:-1
position: 189087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187249-189087:-1:exon

LOC111951655
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951655
product: cadherin-23-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023969869.1
SIO_010081: LOC111951655
subclass of: SO_0000673
so part of: LOC111951655
location: complement(join(187249..187632,188182..188409,188963..189087))
location: region:187249-189087:-1
so has part: feature:188963-189087:-1:exon
so has part: feature:188182-188409:-1:exon
so has part: feature:187249-187632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188963-189087:-1:exon

position:188963:-1
position: 188963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188182-188409:-1:exon

position:188182:-1
position: 188182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188409:-1
position: 188409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:187249-187632:-1:exon

position:187632:-1
position: 187632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-23-like
translation: MDSGVPPHYSDLSLTVNILDVNDNTPIIESQGGYNVSISENVGGGTSVLRVVATDYDIGTNAMLFYYITSGNKDLTFRMDRMTGEMVTRPSPPDRERQQEYRLTVMVEDDGTPPLSASEHGERLQNTFXRI
SIO_010081: LOC111951655
subclass of: SO_0000673
so part of: LOC111951655
location: complement(join(187585..187632,188182..188409,188963..189082))
location: region:187585-189082:-1
so has part: feature:188963-189082:-1:exon
so has part: feature:188182-188409:-1:exon
so has part: feature:187585-187632:-1:exon

XP_023825637.1
type: Protein
SIO_000068: ncbiprotein

position:187585:-1
position: 187585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189082:-1
position: 189082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188963-189082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188182-188409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187585-187632:-1:exon

LOC111951671
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(196944..316776)
location: region:196944-316776:-1
so has part: feature:196944-316776:-1:exon
subclass of: SO_0000010

111951671
type: Gene
SIO_000068: ncbigene

position:196944:-1
position: 196944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316776:-1
position: 316776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196944-316776:-1:exon

LOC111951671
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951671
product: cadherin-23-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024134577.1
SIO_010081: LOC111951671
subclass of: SO_0000673
so part of: LOC111951671
location: complement(join(196944..197057,200355..200504,200724..200726,201829..201930,202250..202638,203723..203858,204470..204618,205067..205127,216760..216908,218504..218617,218669..218690,219232..219380,220998..221111,222278..222430,222815..223034,223448..223593,223937..224126,243683..243790,246280..246392,247483..247599,248946..249018,254808..254935,255286..255391,268916..269153,269312..269376,305337..305495,307141..307290,316311..316403,316567..316776))
location: region:196944-316776:-1
so has part: feature:316567-316776:-1:exon
so has part: feature:316311-316403:-1:exon
so has part: feature:307141-307290:-1:exon
so has part: feature:305337-305495:-1:exon
so has part: feature:269312-269376:-1:exon
so has part: feature:268916-269153:-1:exon
so has part: feature:255286-255391:-1:exon
so has part: feature:254808-254935:-1:exon
so has part: feature:248946-249018:-1:exon
so has part: feature:247483-247599:-1:exon
so has part: feature:246280-246392:-1:exon
so has part: feature:243683-243790:-1:exon
so has part: feature:223937-224126:-1:exon
so has part: feature:223448-223593:-1:exon
so has part: feature:222815-223034:-1:exon
so has part: feature:222278-222430:-1:exon
so has part: feature:220998-221111:-1:exon
so has part: feature:219232-219380:-1:exon
so has part: feature:218669-218690:-1:exon
so has part: feature:218504-218617:-1:exon
so has part: feature:216760-216908:-1:exon
so has part: feature:205067-205127:-1:exon
so has part: feature:204470-204618:-1:exon
so has part: feature:203723-203858:-1:exon
so has part: feature:202250-202638:-1:exon
so has part: feature:201829-201930:-1:exon
so has part: feature:200724-200726:-1:exon
so has part: feature:200355-200504:-1:exon
so has part: feature:196944-197057:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316567-316776:-1:exon

position:316567:-1
position: 316567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316311-316403:-1:exon

position:316311:-1
position: 316311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316403:-1
position: 316403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307141-307290:-1:exon

position:307141:-1
position: 307141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307290:-1
position: 307290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:305337-305495:-1:exon

position:305337:-1
position: 305337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305495:-1
position: 305495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:269312-269376:-1:exon

position:269312:-1
position: 269312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269376:-1
position: 269376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:268916-269153:-1:exon

position:268916:-1
position: 268916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269153:-1
position: 269153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:255286-255391:-1:exon

position:255286:-1
position: 255286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255391:-1
position: 255391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:254808-254935:-1:exon

position:254808:-1
position: 254808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254935:-1
position: 254935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:248946-249018:-1:exon

position:248946:-1
position: 248946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249018:-1
position: 249018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:247483-247599:-1:exon

position:247483:-1
position: 247483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247599:-1
position: 247599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:246280-246392:-1:exon

position:246280:-1
position: 246280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246392:-1
position: 246392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:243683-243790:-1:exon

position:243683:-1
position: 243683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243790:-1
position: 243790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:223937-224126:-1:exon

position:223937:-1
position: 223937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224126:-1
position: 224126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:223448-223593:-1:exon

position:223448:-1
position: 223448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223593:-1
position: 223593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:222815-223034:-1:exon

position:222815:-1
position: 222815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223034:-1
position: 223034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:222278-222430:-1:exon

position:222278:-1
position: 222278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222430:-1
position: 222430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:220998-221111:-1:exon

position:220998:-1
position: 220998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221111:-1
position: 221111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:219232-219380:-1:exon

position:219232:-1
position: 219232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219380:-1
position: 219380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:218669-218690:-1:exon

position:218669:-1
position: 218669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218690:-1
position: 218690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:218504-218617:-1:exon

position:218504:-1
position: 218504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218617:-1
position: 218617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:216760-216908:-1:exon

position:216760:-1
position: 216760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216908:-1
position: 216908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:205067-205127:-1:exon

position:205067:-1
position: 205067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205127:-1
position: 205127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:204470-204618:-1:exon

position:204470:-1
position: 204470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204618:-1
position: 204618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:203723-203858:-1:exon

position:203723:-1
position: 203723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203858:-1
position: 203858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:202250-202638:-1:exon

position:202250:-1
position: 202250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202638:-1
position: 202638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:201829-201930:-1:exon

position:201829:-1
position: 201829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201930:-1
position: 201930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:200724-200726:-1:exon

position:200724:-1
position: 200724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200726:-1
position: 200726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:200355-200504:-1:exon

position:200355:-1
position: 200355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200504:-1
position: 200504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:196944-197057:-1:exon

position:197057:-1
position: 197057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951671
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-23-like
translation: MNSSXLWHTADCCSHTAVAQESALPDIIVIKYAIFDQSDENEEGWSSKIREHWERNTRKYQDRLHNTPEEGTKPCQKDQQLLLNGGSLQGDSVTELVLVCWGVNSMFQVFLTGNNSDHFTISPTAVQGRADIRMRVAVPLDYENIRSYSFSLFANESMSDHVGFARIYIDLINENDNRPIFSKPLYNISLPENTPRGTSLLRIQAIDGDFGTFGTVRYYFSDEPDQFLLDAETGWVSLRGNLDYELMRRFTLTVLARDGGGEETTGRLRVNVLDVNDNTPLFQKEFYMGSLRENEQATQQVARVRATDEDSPPNNFLTYTITSASAFRSYFRIIMVEGYAVISVNSPLDYEMVPEGLXYLTVMAKDGGNPALNSSVAVTVELFDENDNPPKFSKPSYIAKIPENIIAGATVVFVNATDLDASREFGQASLIYSLQGSSQFRLNTRSGEITTTALLDRELKSEYILIVRAVDGGVGPLQKTGIATVNITILDINDNAPMWRGEPYHANVVEMSPMDTDVISVLAIDPDDGDNGTVVYSISPENPFYTINSSTGKIRTSGVVLDRESSNPKDTLLMRTIIVSAVDIGRPPLRSSFSTTVYVNLLDLNDNDPTFLNLPFVAEVPEGLPSGSSVFKIQVDDPDEEENGMVTMALQVGMPRLDFYLNSTTGVLYSTATLDREQIGLYHLRIVGYDQGQNPRTSTSTLTITVLDANDETPTFFPKVYNVSLQESVPRDHVVAHLNCFDNDAGLNAELSYFITGGNQDGKFSVGFRNGVVRTVVALDRETLAAYTLVIEAIDNGPSGSRRTGTATVFVKVLDVNDNRPIFLQNSYETSILENVPIGTSILQTCVFVCISGNQDGKFSVGFRNGVSGLWLPWTERTLAAYTLVIEAIDNGPSGSRRTGTATVFVKVLDVNDNRPIFLQNSYETSILENVPIGTSILQVQATDADQGENGRVLYKILSGNSKSLFRINELSGLVTRGQRALDRESSSSHVLEVEAYNRDQGRMRSSVRVIVYVEDANDEPPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYALVSGSDRKFDVDVSTGLVTTVDYLDYETKTSYLMNVSATNQAPPFHRGFCTVYVTLLNELDEAVAFFSAGYEVSLQENIATGTEVVQVQAQSADNLNQLSYRFDPDTSPAALTLFKIDSITGRITVTGLLDREKGDLYTLTVVADDGGPKKDSTVKVSITILDENDNSPEFDITSDSSVEIPENTPVGKRVAVVLGRDKDAGNNALVNFSLVAGNMQDVFEIRTVNHTNGEISVQLPSGPRVC
SIO_010081: LOC111951671
subclass of: SO_0000673
so part of: LOC111951671
location: complement(join(196944..197057,200355..200504,200724..200726,201829..201930,202250..202638,203723..203858,204470..204618,205067..205127,216760..216908,218504..218617,218669..218690,219232..219380,220998..221111,222278..222430,222815..223034,223448..223593,223937..224126,243683..243790,246280..246392,247483..247599,248946..249018,254808..254935,255286..255391,268916..269153,269312..269376,305337..305495,307141..307290,316311..316403,316567..316776))
location: region:196944-316776:-1
so has part: feature:316567-316776:-1:exon
so has part: feature:316311-316403:-1:exon
so has part: feature:307141-307290:-1:exon
so has part: feature:305337-305495:-1:exon
so has part: feature:269312-269376:-1:exon
so has part: feature:268916-269153:-1:exon
so has part: feature:255286-255391:-1:exon
so has part: feature:254808-254935:-1:exon
so has part: feature:248946-249018:-1:exon
so has part: feature:247483-247599:-1:exon
so has part: feature:246280-246392:-1:exon
so has part: feature:243683-243790:-1:exon
so has part: feature:223937-224126:-1:exon
so has part: feature:223448-223593:-1:exon
so has part: feature:222815-223034:-1:exon
so has part: feature:222278-222430:-1:exon
so has part: feature:220998-221111:-1:exon
so has part: feature:219232-219380:-1:exon
so has part: feature:218669-218690:-1:exon
so has part: feature:218504-218617:-1:exon
so has part: feature:216760-216908:-1:exon
so has part: feature:205067-205127:-1:exon
so has part: feature:204470-204618:-1:exon
so has part: feature:203723-203858:-1:exon
so has part: feature:202250-202638:-1:exon
so has part: feature:201829-201930:-1:exon
so has part: feature:200724-200726:-1:exon
so has part: feature:200355-200504:-1:exon
so has part: feature:196944-197057:-1:exon

XP_023990345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316567-316776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316311-316403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307141-307290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305337-305495:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269312-269376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268916-269153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255286-255391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254808-254935:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:248946-249018:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247483-247599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246280-246392:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243683-243790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:223937-224126:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:223448-223593:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:222815-223034:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:222278-222430:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:220998-221111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:219232-219380:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:218669-218690:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:218504-218617:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:216760-216908:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:205067-205127:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:204470-204618:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:203723-203858:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:202250-202638:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:201829-201930:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:200724-200726:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:200355-200504:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:196944-197057:-1:exon

plpp4
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: plpp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 903782..1048194
location: region:903782-1048194:1
so has part: feature:903782-1048194:1:exon
subclass of: SO_0000010

112067851
type: Gene
SIO_000068: ncbigene

position:903782:1
position: 903782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048194:1
position: 1048194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903782-1048194:1:exon

plpp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: plpp4
product: phospholipid phosphatase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024134578.1
SIO_010081: plpp4
subclass of: SO_0000673
so part of: plpp4
location: join(903782..903855,904987..905073,948147..948255,967430..967520,1028497..1028560,1028905..1029029,1043834..1044004,1048001..1048194)
location: region:903782-1048194:1
so has part: feature:903782-903855:1:exon
so has part: feature:904987-905073:1:exon
so has part: feature:948147-948255:1:exon
so has part: feature:967430-967520:1:exon
so has part: feature:1028497-1028560:1:exon
so has part: feature:1028905-1029029:1:exon
so has part: feature:1043834-1044004:1:exon
so has part: feature:1048001-1048194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903782-903855:1:exon

position:903855:1
position: 903855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904987-905073:1:exon

position:904987:1
position: 904987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905073:1
position: 905073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:948147-948255:1:exon

position:948147:1
position: 948147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948255:1
position: 948255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:967430-967520:1:exon

position:967430:1
position: 967430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967520:1
position: 967520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1028497-1028560:1:exon

position:1028497:1
position: 1028497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028560:1
position: 1028560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1028905-1029029:1:exon

position:1028905:1
position: 1028905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029029:1
position: 1029029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1043834-1044004:1:exon

position:1043834:1
position: 1043834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044004:1
position: 1044004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1048001-1048194:1:exon

position:1048001:1
position: 1048001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

plpp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: plpp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid phosphatase 4
translation: MCKPSEGVVIPFRSANYETPPTRKWMKPKPSPPACAEYLDKLVKYFAHFDPVHRLTEFLEPFERVIQPEELWLYKNPLVESDHIPKRVMFAISFLTPLAVIFVVKIIRRTDKTEIKEACLAVSLALALNGVFTNTIKLIVGRPRPDYFQRCFPDGQVKVKMLCTGEPYLVSEGRKSFPSSHSSFAFSGLGFTSFYLAGKLHCFTDQGRGRSWRLCAMLLPLYSAVMIALSRTCDYKHHWQDAFVGGVIGLLFAYICYRQHYPPFLHTDCHLPYASLAKAHGNPLVLPTENTTSMPLKGLTVGPV
SIO_010081: plpp4
subclass of: SO_0000673
so part of: plpp4
location: join(903782..903855,904987..905073,948147..948255,967430..967520,1028497..1028560,1028905..1029029,1043834..1044004,1048001..1048194)
location: region:903782-1048194:1
so has part: feature:903782-903855:1:exon
so has part: feature:904987-905073:1:exon
so has part: feature:948147-948255:1:exon
so has part: feature:967430-967520:1:exon
so has part: feature:1028497-1028560:1:exon
so has part: feature:1028905-1029029:1:exon
so has part: feature:1043834-1044004:1:exon
so has part: feature:1048001-1048194:1:exon

XP_023990346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:903782-903855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:904987-905073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:948147-948255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967430-967520:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028497-1028560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028905-1029029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043834-1044004:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1048001-1048194:1:exon

wdr11
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: wdr11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1115451..1254014
location: region:1115451-1254014:1
so has part: feature:1115451-1254014:1:exon
subclass of: SO_0000010

111951813
type: Gene
SIO_000068: ncbigene

position:1115451:1
position: 1115451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254014:1
position: 1254014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115451-1254014:1:exon

wdr11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: wdr11
product: WD repeat domain 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_023970051.1
SIO_010081: wdr11
subclass of: SO_0000673
so part of: wdr11
location: join(1115451..1115668,1125454..1125565,1136984..1137137,1139461..1139634,1152294..1152495,1158377..1158545,1164144..1164243,1164623..1164833,1164976..1165076,1172086..1172262,1188662..1188746,1197041..1197147,1199646..1199721,1200566..1200674,1202461..1202585,1204296..1204446,1213642..1213748,1213833..1213947,1215060..1215231,1215643..1215751,1217793..1217855,1218434..1218499,1232986..1233175,1238645..1238740,1250902..1251067,1251652..1251749,1251991..1252136,1252661..1252740,1253448..1254014)
location: region:1115451-1254014:1
so has part: feature:1115451-1115668:1:exon
so has part: feature:1125454-1125565:1:exon
so has part: feature:1136984-1137137:1:exon
so has part: feature:1139461-1139634:1:exon
so has part: feature:1152294-1152495:1:exon
so has part: feature:1158377-1158545:1:exon
so has part: feature:1164144-1164243:1:exon
so has part: feature:1164623-1164833:1:exon
so has part: feature:1164976-1165076:1:exon
so has part: feature:1172086-1172262:1:exon
so has part: feature:1188662-1188746:1:exon
so has part: feature:1197041-1197147:1:exon
so has part: feature:1199646-1199721:1:exon
so has part: feature:1200566-1200674:1:exon
so has part: feature:1202461-1202585:1:exon
so has part: feature:1204296-1204446:1:exon
so has part: feature:1213642-1213748:1:exon
so has part: feature:1213833-1213947:1:exon
so has part: feature:1215060-1215231:1:exon
so has part: feature:1215643-1215751:1:exon
so has part: feature:1217793-1217855:1:exon
so has part: feature:1218434-1218499:1:exon
so has part: feature:1232986-1233175:1:exon
so has part: feature:1238645-1238740:1:exon
so has part: feature:1250902-1251067:1:exon
so has part: feature:1251652-1251749:1:exon
so has part: feature:1251991-1252136:1:exon
so has part: feature:1252661-1252740:1:exon
so has part: feature:1253448-1254014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1115451-1115668:1:exon

position:1115668:1
position: 1115668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1125454-1125565:1:exon

position:1125454:1
position: 1125454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125565:1
position: 1125565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1136984-1137137:1:exon

position:1136984:1
position: 1136984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137137:1
position: 1137137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1139461-1139634:1:exon

position:1139461:1
position: 1139461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139634:1
position: 1139634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1152294-1152495:1:exon

position:1152294:1
position: 1152294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152495:1
position: 1152495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1158377-1158545:1:exon

position:1158377:1
position: 1158377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158545:1
position: 1158545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1164144-1164243:1:exon

position:1164144:1
position: 1164144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164243:1
position: 1164243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1164623-1164833:1:exon

position:1164623:1
position: 1164623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164833:1
position: 1164833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1164976-1165076:1:exon

position:1164976:1
position: 1164976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165076:1
position: 1165076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1172086-1172262:1:exon

position:1172086:1
position: 1172086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172262:1
position: 1172262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1188662-1188746:1:exon

position:1188662:1
position: 1188662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188746:1
position: 1188746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1197041-1197147:1:exon

position:1197041:1
position: 1197041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197147:1
position: 1197147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1199646-1199721:1:exon

position:1199646:1
position: 1199646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199721:1
position: 1199721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1200566-1200674:1:exon

position:1200566:1
position: 1200566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200674:1
position: 1200674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1202461-1202585:1:exon

position:1202461:1
position: 1202461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202585:1
position: 1202585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1204296-1204446:1:exon

position:1204296:1
position: 1204296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204446:1
position: 1204446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1213642-1213748:1:exon

position:1213642:1
position: 1213642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213748:1
position: 1213748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1213833-1213947:1:exon

position:1213833:1
position: 1213833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213947:1
position: 1213947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1215060-1215231:1:exon

position:1215060:1
position: 1215060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215231:1
position: 1215231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1215643-1215751:1:exon

position:1215643:1
position: 1215643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215751:1
position: 1215751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1217793-1217855:1:exon

position:1217793:1
position: 1217793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217855:1
position: 1217855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1218434-1218499:1:exon

position:1218434:1
position: 1218434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218499:1
position: 1218499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1232986-1233175:1:exon

position:1232986:1
position: 1232986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233175:1
position: 1233175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1238645-1238740:1:exon

position:1238645:1
position: 1238645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238740:1
position: 1238740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1250902-1251067:1:exon

position:1250902:1
position: 1250902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251067:1
position: 1251067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1251652-1251749:1:exon

position:1251652:1
position: 1251652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251749:1
position: 1251749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1251991-1252136:1:exon

position:1251991:1
position: 1251991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252136:1
position: 1252136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1252661-1252740:1:exon

position:1252661:1
position: 1252661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252740:1
position: 1252740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1253448-1254014:1:exon

position:1253448:1
position: 1253448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

wdr11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: wdr11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 11
translation: MIPYSVNIKLAARTLTGTLNLQNKTAVDWGWQGLIAQGCHSSILIIDPKTSQTIQVLERHKANVVKVKWSRENYHHSLSSPYSLRLASADSAGKIIVWDVVSGTAHCEIQEHSKPIQDMDWLWTQDASRDLLLAIHPPNYIVLWNGDTGTKLWKKSYAENILSFSFDPFDPSNLALLTSEGIVFISDFSHSKPPGSGGKKVYIASPHASPAHTKPVPAALPAPTGAKKALNKVKVLITNEKPTAEAVTLNADCLQLSYLPSKRNHMLLLYPREILILDLELSQTVGVVAIERSGVPFIQVIPCAQRDALFCLHENGCITLRVCRSTTAPDESVAASDPEQSVQELVYDLRSQCDAIRVTKTVRPYRMVICPVNENNAALTVSDGRVMLWELKAHMSKPTVNPNSGLSPLYAPVAFCGSPLGQNQKKIQDLSLNTMIGQSLVSGADPPPPSLQQEVQLKFLLTGLLSGLPLPPFALRMCPPLTTKNINHYQPLLAVGTSNGSVLVYNLTSGLLHKDLSVHSCEVKGIEWVSLTSFLSFATSTPNNAGLVRNELQHVDLPTGRCFAFRGEQGNDEPAIEMMKVSHLKQYLVVVFRDKPLELWDVRTGTLLREMAKNFPTVTALEWSPSHNLKSLKKKQMLAREAMARYTTLSDNEQSSVESSVISLLQDAESKSEGGGQAISAREHFVFTDTDGQVYHITVEGNTVKDGARIPPDGSMGSIACIAWKGDTLVLGDVDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMYTDGAEVWDTKEVNMVSSLRIGRNVNYRILDIDWCTSDKVVLASEDGCIRVLEMAMKSASYRMDEQDLTDPVWCPYLLLPRAALTLKAFLLLQPWSGTFTMDITQVDYTEKHEIKGLIQEQLNSMSNDMKSVLLDPELNLLQRCLLVSRLFGDESDLQFWTVAAHYLQSFAQARHLSVPVPEGQTPAEGTQATPQGHLDIYHDTLCESFYFQRFQLERVHLQEVKRSSYEHTKKCADQLLLLGQTDRAVQLLLETSADNPSYYCDSLKACLVTTITSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKAADACRYLQTYGEWNRAAWLAKVRLNPAESSDVLKRWAEHLCSPQVNQKSKAILVLLSLGCFHKVGEMLQSMRYFDRAALFIEACLKYGVMEANDSTNKLIGAAFVDYARLLRTLGLRESAAFWASRAGGAGEQLLEELFQGEGAVPEETEGPENTE
SIO_010081: wdr11
subclass of: SO_0000673
so part of: wdr11
location: join(1115583..1115668,1125454..1125565,1136984..1137137,1139461..1139634,1152294..1152495,1158377..1158545,1164144..1164243,1164623..1164833,1164976..1165076,1172086..1172262,1188662..1188746,1197041..1197147,1199646..1199721,1200566..1200674,1202461..1202585,1204296..1204446,1213642..1213748,1213833..1213947,1215060..1215231,1215643..1215751,1217793..1217855,1218434..1218499,1232986..1233175,1238645..1238740,1250902..1251067,1251652..1251749,1251991..1252136,1252661..1252740,1253448..1253629)
location: region:1115583-1253629:1
so has part: feature:1115583-1115668:1:exon
so has part: feature:1125454-1125565:1:exon
so has part: feature:1136984-1137137:1:exon
so has part: feature:1139461-1139634:1:exon
so has part: feature:1152294-1152495:1:exon
so has part: feature:1158377-1158545:1:exon
so has part: feature:1164144-1164243:1:exon
so has part: feature:1164623-1164833:1:exon
so has part: feature:1164976-1165076:1:exon
so has part: feature:1172086-1172262:1:exon
so has part: feature:1188662-1188746:1:exon
so has part: feature:1197041-1197147:1:exon
so has part: feature:1199646-1199721:1:exon
so has part: feature:1200566-1200674:1:exon
so has part: feature:1202461-1202585:1:exon
so has part: feature:1204296-1204446:1:exon
so has part: feature:1213642-1213748:1:exon
so has part: feature:1213833-1213947:1:exon
so has part: feature:1215060-1215231:1:exon
so has part: feature:1215643-1215751:1:exon
so has part: feature:1217793-1217855:1:exon
so has part: feature:1218434-1218499:1:exon
so has part: feature:1232986-1233175:1:exon
so has part: feature:1238645-1238740:1:exon
so has part: feature:1250902-1251067:1:exon
so has part: feature:1251652-1251749:1:exon
so has part: feature:1251991-1252136:1:exon
so has part: feature:1252661-1252740:1:exon
so has part: feature:1253448-1253629:1:exon

XP_023825819.1
type: Protein
SIO_000068: ncbiprotein

position:1115583:1
position: 1115583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253629:1
position: 1253629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115583-1115668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125454-1125565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136984-1137137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139461-1139634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152294-1152495:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1158377-1158545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1164144-1164243:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1164623-1164833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1164976-1165076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1172086-1172262:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1188662-1188746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1197041-1197147:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1199646-1199721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1200566-1200674:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1202461-1202585:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1204296-1204446:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1213642-1213748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1213833-1213947:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1215060-1215231:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1215643-1215751:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1217793-1217855:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1218434-1218499:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1232986-1233175:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1238645-1238740:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1250902-1251067:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1251652-1251749:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1251991-1252136:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1252661-1252740:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1253448-1253629:1:exon

LOC111951954
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1487236..1601421)
location: region:1487236-1601421:-1
so has part: feature:1487236-1601421:-1:exon
subclass of: SO_0000010

111951954
type: Gene
SIO_000068: ncbigene

position:1487236:-1
position: 1487236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1601421:-1
position: 1601421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1487236-1601421:-1:exon

LOC111951954
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951954
product: fibroblast growth factor receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023970327.2
SIO_010081: LOC111951954
subclass of: SO_0000673
so part of: LOC111951954
location: complement(join(1487236..1487638,1493740..1493845,1494956..1495093,1506110..1506180,1522449..1522571,1523363..1523553,1527753..1527863,1528490..1528611,1544557..1544699,1545676..1545875,1556678..1556835,1557272..1557443,1560696..1560819,1566095..1566264,1579378..1579452,1580016..1580285,1597799..1598075,1600683..1601421))
location: region:1487236-1601421:-1
so has part: feature:1600683-1601421:-1:exon
so has part: feature:1597799-1598075:-1:exon
so has part: feature:1580016-1580285:-1:exon
so has part: feature:1579378-1579452:-1:exon
so has part: feature:1566095-1566264:-1:exon
so has part: feature:1560696-1560819:-1:exon
so has part: feature:1557272-1557443:-1:exon
so has part: feature:1556678-1556835:-1:exon
so has part: feature:1545676-1545875:-1:exon
so has part: feature:1544557-1544699:-1:exon
so has part: feature:1528490-1528611:-1:exon
so has part: feature:1527753-1527863:-1:exon
so has part: feature:1523363-1523553:-1:exon
so has part: feature:1522449-1522571:-1:exon
so has part: feature:1506110-1506180:-1:exon
so has part: feature:1494956-1495093:-1:exon
so has part: feature:1493740-1493845:-1:exon
so has part: feature:1487236-1487638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1600683-1601421:-1:exon

position:1600683:-1
position: 1600683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1597799-1598075:-1:exon

position:1597799:-1
position: 1597799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598075:-1
position: 1598075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1580016-1580285:-1:exon

position:1580016:-1
position: 1580016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580285:-1
position: 1580285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1579378-1579452:-1:exon

position:1579378:-1
position: 1579378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579452:-1
position: 1579452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1566095-1566264:-1:exon

position:1566095:-1
position: 1566095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566264:-1
position: 1566264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1560696-1560819:-1:exon

position:1560696:-1
position: 1560696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560819:-1
position: 1560819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1557272-1557443:-1:exon

position:1557272:-1
position: 1557272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1557443:-1
position: 1557443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1556678-1556835:-1:exon

position:1556678:-1
position: 1556678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556835:-1
position: 1556835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1545676-1545875:-1:exon

position:1545676:-1
position: 1545676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1545875:-1
position: 1545875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1544557-1544699:-1:exon

position:1544557:-1
position: 1544557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1544699:-1
position: 1544699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1528490-1528611:-1:exon

position:1528490:-1
position: 1528490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528611:-1
position: 1528611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1527753-1527863:-1:exon

position:1527753:-1
position: 1527753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527863:-1
position: 1527863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1523363-1523553:-1:exon

position:1523363:-1
position: 1523363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523553:-1
position: 1523553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1522449-1522571:-1:exon

position:1522449:-1
position: 1522449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522571:-1
position: 1522571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1506110-1506180:-1:exon

position:1506110:-1
position: 1506110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506180:-1
position: 1506180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1494956-1495093:-1:exon

position:1494956:-1
position: 1494956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495093:-1
position: 1495093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1493740-1493845:-1:exon

position:1493740:-1
position: 1493740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493845:-1
position: 1493845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1487236-1487638:-1:exon

position:1487638:-1
position: 1487638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor receptor 2
translation: MGSVSRGRQSLRRGGWGTDSPSTNGMASWAWLLATILLSLATATLARPPYTAAEEEEATLEPEEPPTKYQISKPTVCSVHPGELLKLSCLLAGEPGAITWTKDGSTLGANNRTLIEQEVLQIRDATPKDSGLYACSTVGPQGSDTLCFIVNVTDAISSGDDEDDTERSEDVGADGEQIRAPYWTMLEKMEKRLHAVPAANTVKFRCAAGGNPRPKMRWLKNSRPFRQEDRMGGYKVRHQHWTLIMESVVPSDKGNYTCLVENAYGAINHTYTLDVVERFPPSAILQAGLPANTSVQVGEDARFVCKVYSDAQTPHQWLQHIQKNGSRTGPDGTPVAHTLQRSGINSSDVEVLTLTNVTEEDAGEYTCKVSNYIGAVNQSGWLTVIPASNEDTVTGLMSPDYVEIAIYCIGVFLIACMVVIVVVCRMRNTAKKPDFGNQPAVHKLSKQIPLRRQVSNDSSSSMNSSTPLVRITTRRSSAGHDDPIPEYDLPEDPRWEFSRDRLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAITVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRENLRARRPPGMEYSYDINRCSDEQLAFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTESNFMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPGNCTNELYMMMKDCWHAISSHRPTFKQLVEDLDRILTLVTNEEYLDLCAPAEQYSPSFQDTRSSCSSGDDSVFSHDPLPEEPCLPKYQHISGGVKT
SIO_010081: LOC111951954
subclass of: SO_0000673
so part of: LOC111951954
location: complement(join(1487474..1487638,1493740..1493845,1494956..1495093,1506110..1506180,1522449..1522571,1523363..1523553,1527753..1527863,1528490..1528611,1544557..1544699,1545676..1545875,1556678..1556835,1557272..1557443,1560696..1560819,1566095..1566264,1579378..1579452,1580016..1580285,1597799..1597988))
location: region:1487474-1597988:-1
so has part: feature:1597799-1597988:-1:exon
so has part: feature:1580016-1580285:-1:exon
so has part: feature:1579378-1579452:-1:exon
so has part: feature:1566095-1566264:-1:exon
so has part: feature:1560696-1560819:-1:exon
so has part: feature:1557272-1557443:-1:exon
so has part: feature:1556678-1556835:-1:exon
so has part: feature:1545676-1545875:-1:exon
so has part: feature:1544557-1544699:-1:exon
so has part: feature:1528490-1528611:-1:exon
so has part: feature:1527753-1527863:-1:exon
so has part: feature:1523363-1523553:-1:exon
so has part: feature:1522449-1522571:-1:exon
so has part: feature:1506110-1506180:-1:exon
so has part: feature:1494956-1495093:-1:exon
so has part: feature:1493740-1493845:-1:exon
so has part: feature:1487474-1487638:-1:exon

XP_023826095.1
type: Protein
SIO_000068: ncbiprotein

position:1487474:-1
position: 1487474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597988:-1
position: 1597988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1597799-1597988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1580016-1580285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1579378-1579452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1566095-1566264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1560696-1560819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1557272-1557443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1556678-1556835:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1545676-1545875:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1544557-1544699:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1528490-1528611:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1527753-1527863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1523363-1523553:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1522449-1522571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1506110-1506180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1494956-1495093:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1493740-1493845:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1487474-1487638:-1:exon

ate1
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: ate1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1709530..1885458)
location: region:1709530-1885458:-1
so has part: feature:1709530-1885458:-1:exon
subclass of: SO_0000010

111951822
type: Gene
SIO_000068: ncbigene

position:1709530:-1
position: 1709530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885458:-1
position: 1885458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1709530-1885458:-1:exon

ate1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: ate1
product: arginyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_023970061.1
SIO_010081: ate1
subclass of: SO_0000673
so part of: ate1
location: complement(join(1709530..1709944,1732394..1732514,1763984..1764083,1782329..1782510,1797577..1797609,1839488..1839616,1845105..1845319,1869224..1869421,1875025..1875128,1875933..1875995,1876192..1876255,1885300..1885458))
location: region:1709530-1885458:-1
so has part: feature:1885300-1885458:-1:exon
so has part: feature:1876192-1876255:-1:exon
so has part: feature:1875933-1875995:-1:exon
so has part: feature:1875025-1875128:-1:exon
so has part: feature:1869224-1869421:-1:exon
so has part: feature:1845105-1845319:-1:exon
so has part: feature:1839488-1839616:-1:exon
so has part: feature:1797577-1797609:-1:exon
so has part: feature:1782329-1782510:-1:exon
so has part: feature:1763984-1764083:-1:exon
so has part: feature:1732394-1732514:-1:exon
so has part: feature:1709530-1709944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1885300-1885458:-1:exon

position:1885300:-1
position: 1885300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1876192-1876255:-1:exon

position:1876192:-1
position: 1876192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876255:-1
position: 1876255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1875933-1875995:-1:exon

position:1875933:-1
position: 1875933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875995:-1
position: 1875995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1875025-1875128:-1:exon

position:1875025:-1
position: 1875025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875128:-1
position: 1875128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1869224-1869421:-1:exon

position:1869224:-1
position: 1869224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869421:-1
position: 1869421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1845105-1845319:-1:exon

position:1845105:-1
position: 1845105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845319:-1
position: 1845319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1839488-1839616:-1:exon

position:1839488:-1
position: 1839488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839616:-1
position: 1839616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1797577-1797609:-1:exon

position:1797577:-1
position: 1797577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1797609:-1
position: 1797609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1782329-1782510:-1:exon

position:1782329:-1
position: 1782329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1782510:-1
position: 1782510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1763984-1764083:-1:exon

position:1763984:-1
position: 1763984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764083:-1
position: 1764083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1732394-1732514:-1:exon

position:1732394:-1
position: 1732394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732514:-1
position: 1732514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1709530-1709944:-1:exon

position:1709944:-1
position: 1709944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ate1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: ate1
product: arginyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_023970060.1
SIO_010081: ate1
subclass of: SO_0000673
so part of: ate1
location: complement(join(1709530..1709944,1732394..1732514,1763984..1764083,1782329..1782510,1797577..1797609,1841632..1841760,1845105..1845319,1869224..1869421,1875025..1875128,1875933..1875995,1876192..1876255,1885300..1885457))
location: region:1709530-1885457:-1
so has part: feature:1885300-1885457:-1:exon
so has part: feature:1876192-1876255:-1:exon
so has part: feature:1875933-1875995:-1:exon
so has part: feature:1875025-1875128:-1:exon
so has part: feature:1869224-1869421:-1:exon
so has part: feature:1845105-1845319:-1:exon
so has part: feature:1841632-1841760:-1:exon
so has part: feature:1797577-1797609:-1:exon
so has part: feature:1782329-1782510:-1:exon
so has part: feature:1763984-1764083:-1:exon
so has part: feature:1732394-1732514:-1:exon
so has part: feature:1709530-1709944:-1:exon

position:1885457:-1
position: 1885457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1885300-1885457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1876192-1876255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1875933-1875995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1875025-1875128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869224-1869421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1845105-1845319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1841632-1841760:-1:exon

position:1841632:-1
position: 1841632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1841760:-1
position: 1841760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1797577-1797609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1782329-1782510:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1763984-1764083:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1732394-1732514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1709530-1709944:-1:exon

ate1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: ate1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginyl-tRNA--protein transferase 1 isoform X2
translation: MAAGSSCTIVEYFGGDDGYRCGYCKNEKGNFSHGMWSHAMTVQDYQDLIDRGWRRSGKYVYKPIMNKTCCPQYTIRCHALNFQPSKTHKKILKKMSKFLSKGEMPTEQGDGEPMDSLCEEGGLHGPAKVCHPEVASPVVTAILTEEGDTTPVEFETARKDPVSVPDGRGPESTPKPGVGADPGRPLCRKAKELRKARRLQKEQKRQEGGGVPASVTSNPATPVQLNQPKALEEFINESLPDSPLHHLEVRLVPVNDDDPQFMATYEQSAALYARYQMAVHGDTPSECNESEFRRFLCDSPLEMEMSPDGPAAGYGSFHQQYWLDGRIVAVGVVDVLPTCVSSVYLYYHPDFASLSLGSYSALREVAFTRQLQKQSPKLCFYYLGFYIHSCNKMRYKGQYQPSDLLCPETYVFVPIERCIPSLEQTHYARFNQDPDAGDTHVLKDLGRALVLYRRTVMPYAAYARKRKGSNDEMEVAQYAGLVGQVCAERILLYRA
SIO_010081: ate1
subclass of: SO_0000673
so part of: ate1
location: complement(join(1709766..1709944,1732394..1732514,1763984..1764083,1782329..1782510,1797577..1797609,1839488..1839616,1845105..1845319,1869224..1869421,1875025..1875128,1875933..1875995,1876192..1876255,1885300..1885399))
location: region:1709766-1885399:-1
so has part: feature:1885300-1885399:-1:exon
so has part: feature:1876192-1876255:-1:exon
so has part: feature:1875933-1875995:-1:exon
so has part: feature:1875025-1875128:-1:exon
so has part: feature:1869224-1869421:-1:exon
so has part: feature:1845105-1845319:-1:exon
so has part: feature:1839488-1839616:-1:exon
so has part: feature:1797577-1797609:-1:exon
so has part: feature:1782329-1782510:-1:exon
so has part: feature:1763984-1764083:-1:exon
so has part: feature:1732394-1732514:-1:exon
so has part: feature:1709766-1709944:-1:exon

XP_023825829.1
type: Protein
SIO_000068: ncbiprotein

position:1709766:-1
position: 1709766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885399:-1
position: 1885399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1885300-1885399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1876192-1876255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1875933-1875995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1875025-1875128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869224-1869421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1845105-1845319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1839488-1839616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1797577-1797609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1782329-1782510:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1763984-1764083:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1732394-1732514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1709766-1709944:-1:exon

ate1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: ate1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginyl-tRNA--protein transferase 1 isoform X1
translation: MAAGSSCTIVEYFGGDDGYRCGYCKNEKGNFSHGMWSHAMTVQDYQDLIDRGWRRSGKYVYKPIMNKTCCPQYTIRCHALNFQPSKTHKKILKKMSKFLSKGEMPTEQGDGEPMDSLCEEGGLHGPAKVCHPEVASPVVTAILTEEGDTTPVEFETARKDPVSVPDGRGPESTPKPGVGADPGRPLCRKAKELRKARRLQKEQKRQEGGGVPASVTSNPATPVQLNQPKALEEFINESLPDSPLHHLEVRLVRSNPPSSQFKASFDASYQVYKLYQMAIHHDPPDKPTESQFRRFLCDSPLEMEMSPDGPAAGYGSFHQQYWLDGRIVAVGVVDVLPTCVSSVYLYYHPDFASLSLGSYSALREVAFTRQLQKQSPKLCFYYLGFYIHSCNKMRYKGQYQPSDLLCPETYVFVPIERCIPSLEQTHYARFNQDPDAGDTHVLKDLGRALVLYRRTVMPYAAYARKRKGSNDEMEVAQYAGLVGQVCAERILLYRA
SIO_010081: ate1
subclass of: SO_0000673
so part of: ate1
location: complement(join(1709766..1709944,1732394..1732514,1763984..1764083,1782329..1782510,1797577..1797609,1841632..1841760,1845105..1845319,1869224..1869421,1875025..1875128,1875933..1875995,1876192..1876255,1885300..1885399))
location: region:1709766-1885399:-1
so has part: feature:1885300-1885399:-1:exon
so has part: feature:1876192-1876255:-1:exon
so has part: feature:1875933-1875995:-1:exon
so has part: feature:1875025-1875128:-1:exon
so has part: feature:1869224-1869421:-1:exon
so has part: feature:1845105-1845319:-1:exon
so has part: feature:1841632-1841760:-1:exon
so has part: feature:1797577-1797609:-1:exon
so has part: feature:1782329-1782510:-1:exon
so has part: feature:1763984-1764083:-1:exon
so has part: feature:1732394-1732514:-1:exon
so has part: feature:1709766-1709944:-1:exon

XP_023825828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1885300-1885399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1876192-1876255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1875933-1875995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1875025-1875128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869224-1869421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1845105-1845319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1841632-1841760:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1797577-1797609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1782329-1782510:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1763984-1764083:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1732394-1732514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1709766-1709944:-1:exon

LOC111951602
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1898264..1900923
location: region:1898264-1900923:1
so has part: feature:1898264-1900923:1:exon
subclass of: SO_0000010

111951602
type: Gene
SIO_000068: ncbigene

position:1898264:1
position: 1898264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900923:1
position: 1900923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898264-1900923:1:exon

LOC111951602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951602
product: beta-crystallin S-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_023969772.1
SIO_010081: LOC111951602
subclass of: SO_0000673
so part of: LOC111951602
location: join(1898264..1898348,1898842..1899084,1900018..1900923)
location: region:1898264-1900923:1
so has part: feature:1898264-1898348:1:exon
so has part: feature:1898842-1899084:1:exon
so has part: feature:1900018-1900923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1898264-1898348:1:exon

position:1898348:1
position: 1898348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1898842-1899084:1:exon

position:1898842:1
position: 1898842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1899084:1
position: 1899084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1900018-1900923:1:exon

position:1900018:1
position: 1900018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951602
product: beta-crystallin S-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_023969773.1
SIO_010081: LOC111951602
subclass of: SO_0000673
so part of: LOC111951602
location: join(1898271..1898343,1898842..1899084,1900018..1900923)
location: region:1898271-1900923:1
so has part: feature:1898271-1898343:1:exon
so has part: feature:1898842-1899084:1:exon
so has part: feature:1900018-1900923:1:exon

position:1898271:1
position: 1898271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898271-1898343:1:exon

position:1898343:1
position: 1898343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1898842-1899084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1900018-1900923:1:exon

LOC111951602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951602
product: beta-crystallin S-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_023969771.1
SIO_010081: LOC111951602
subclass of: SO_0000673
so part of: LOC111951602
location: join(1898332..1898348,1898827..1899084,1900018..1900923)
location: region:1898332-1900923:1
so has part: feature:1898332-1898348:1:exon
so has part: feature:1898827-1899084:1:exon
so has part: feature:1900018-1900923:1:exon

position:1898332:1
position: 1898332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898332-1898348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1898827-1899084:1:exon

position:1898827:1
position: 1898827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1900018-1900923:1:exon

LOC111951602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-crystallin S-1-like isoform X1
translation: MMGKRLSVQIIFYEGRNFEGRHYECSGDCADMHSHFSRCNSIRVDSGCWVAYEKSNYSGYQYMLTRGKYPDHHRWSGFNDCIRSCRIIPAYNGNYRMKIFERSDFGGKMMELSDDCPNLQDRFHLRDISSCNVMEGYWILHEHPNYRGRQYFLRPGEYNKHSDWGSMSSTSGSVRRVIELKQTNQ
SIO_010081: LOC111951602
subclass of: SO_0000673
so part of: LOC111951602
location: join(1898337..1898348,1898827..1899084,1900018..1900305)
location: region:1898337-1900305:1
so has part: feature:1898337-1898348:1:exon
so has part: feature:1898827-1899084:1:exon
so has part: feature:1900018-1900305:1:exon

XP_023825539.1
type: Protein
SIO_000068: ncbiprotein

position:1898337:1
position: 1898337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900305:1
position: 1900305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898337-1898348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1898827-1899084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1900018-1900305:1:exon

LOC111951602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-crystallin S-1-like isoform X2
translation: MMGKIIFYEGRNFEGRHYECSGDCADMHSHFSRCNSIRVDSGCWVAYEKSNYSGYQYMLTRGKYPDHHRWSGFNDCIRSCRIIPAYNGNYRMKIFERSDFGGKMMELSDDCPNLQDRFHLRDISSCNVMEGYWILHEHPNYRGRQYFLRPGEYNKHSDWGSMSSTSGSVRRVIELKQTNQ
SIO_010081: LOC111951602
subclass of: SO_0000673
so part of: LOC111951602
location: join(1898337..1898348,1898842..1899084,1900018..1900305)
location: region:1898337-1900305:1
so has part: feature:1898337-1898348:1:exon
so has part: feature:1898842-1899084:1:exon
so has part: feature:1900018-1900305:1:exon

XP_023825540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1898337-1898348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1898842-1899084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1900018-1900305:1:exon

LOC111951602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-crystallin M2-like isoform X3
translation: MHSHFSRCNSIRVDSGCWVAYEKSNYSGYQYMLTRGKYPDHHRWSGFNDCIRSCRIIPAYNGNYRMKIFERSDFGGKMMELSDDCPNLQDRFHLRDISSCNVMEGYWILHEHPNYRGRQYFLRPGEYNKHSDWGSMSSTSGSVRRVIELKQTNQ
SIO_010081: LOC111951602
subclass of: SO_0000673
so part of: LOC111951602
location: join(1898908..1899084,1900018..1900305)
location: region:1898908-1900305:1
so has part: feature:1898908-1899084:1:exon
so has part: feature:1900018-1900305:1:exon

XP_023825541.1
type: Protein
SIO_000068: ncbiprotein

position:1898908:1
position: 1898908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898908-1899084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1900018-1900305:1:exon

habp2
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: habp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1920663..1931199)
location: region:1920663-1931199:-1
so has part: feature:1920663-1931199:-1:exon
subclass of: SO_0000010

111951817
type: Gene
SIO_000068: ncbigene

position:1920663:-1
position: 1920663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1931199:-1
position: 1931199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1920663-1931199:-1:exon

habp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: habp2
product: hyaluronan binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_023970056.1
SIO_010081: habp2
subclass of: SO_0000673
so part of: habp2
location: complement(join(1920663..1921140,1921340..1921485,1921791..1921925,1922407..1922549,1925898..1926360,1926601..1926698,1927872..1928049,1928245..1928355,1928512..1928628,1928817..1928927,1930314..1930397,1930585..1930681,1931034..1931199))
location: region:1920663-1931199:-1
so has part: feature:1931034-1931199:-1:exon
so has part: feature:1930585-1930681:-1:exon
so has part: feature:1930314-1930397:-1:exon
so has part: feature:1928817-1928927:-1:exon
so has part: feature:1928512-1928628:-1:exon
so has part: feature:1928245-1928355:-1:exon
so has part: feature:1927872-1928049:-1:exon
so has part: feature:1926601-1926698:-1:exon
so has part: feature:1925898-1926360:-1:exon
so has part: feature:1922407-1922549:-1:exon
so has part: feature:1921791-1921925:-1:exon
so has part: feature:1921340-1921485:-1:exon
so has part: feature:1920663-1921140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1931034-1931199:-1:exon

position:1931034:-1
position: 1931034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1930585-1930681:-1:exon

position:1930585:-1
position: 1930585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930681:-1
position: 1930681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1930314-1930397:-1:exon

position:1930314:-1
position: 1930314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930397:-1
position: 1930397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1928817-1928927:-1:exon

position:1928817:-1
position: 1928817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928927:-1
position: 1928927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1928512-1928628:-1:exon

position:1928512:-1
position: 1928512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928628:-1
position: 1928628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1928245-1928355:-1:exon

position:1928245:-1
position: 1928245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928355:-1
position: 1928355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1927872-1928049:-1:exon

position:1927872:-1
position: 1927872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928049:-1
position: 1928049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1926601-1926698:-1:exon

position:1926601:-1
position: 1926601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926698:-1
position: 1926698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1925898-1926360:-1:exon

position:1925898:-1
position: 1925898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926360:-1
position: 1926360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1922407-1922549:-1:exon

position:1922407:-1
position: 1922407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922549:-1
position: 1922549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1921791-1921925:-1:exon

position:1921791:-1
position: 1921791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1921925:-1
position: 1921925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1921340-1921485:-1:exon

position:1921340:-1
position: 1921340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1921485:-1
position: 1921485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1920663-1921140:-1:exon

position:1921140:-1
position: 1921140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

habp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: habp2
product: hyaluronan binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_023970055.1
SIO_010081: habp2
subclass of: SO_0000673
so part of: habp2
location: complement(join(1920663..1921140,1921340..1921485,1921791..1921925,1922407..1922549,1925898..1926375,1926601..1926698,1927872..1928049,1928245..1928355,1928512..1928628,1928817..1928927,1930314..1930397,1930585..1930681,1931034..1931198))
location: region:1920663-1931198:-1
so has part: feature:1931034-1931198:-1:exon
so has part: feature:1930585-1930681:-1:exon
so has part: feature:1930314-1930397:-1:exon
so has part: feature:1928817-1928927:-1:exon
so has part: feature:1928512-1928628:-1:exon
so has part: feature:1928245-1928355:-1:exon
so has part: feature:1927872-1928049:-1:exon
so has part: feature:1926601-1926698:-1:exon
so has part: feature:1925898-1926375:-1:exon
so has part: feature:1922407-1922549:-1:exon
so has part: feature:1921791-1921925:-1:exon
so has part: feature:1921340-1921485:-1:exon
so has part: feature:1920663-1921140:-1:exon

position:1931198:-1
position: 1931198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1931034-1931198:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930585-1930681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1930314-1930397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1928817-1928927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1928512-1928628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1928245-1928355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1927872-1928049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1926601-1926698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1925898-1926375:-1:exon

position:1926375:-1
position: 1926375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1922407-1922549:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1921791-1921925:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1921340-1921485:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1920663-1921140:-1:exon

habp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: habp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan-binding protein 2 isoform X2
translation: MNSKPLFFCLFLVLLILPVQLHKQEKHGKHQKQEKHTKKTERKYRRHEDILKDPFFEIVDEPGEDDSDEPDWLYELQEPDGQCNPNPCLNNGVCEEKGKRRFKCDCPKPFKGKKCQKGPKRCNRGTCGRGECVLTSKPPFYACKCKQPFLPPDCKSLAVCQPNPCKNGGLCVKDGMDFDCLCPEGFSGRFCNVGPDDCYKLKDDGESYRGNVSETDDGEECLYWNSHFILEKGSDPFNDFEDDDGLGPHNFCRNPDGDTQPWCFIRRGRVLLWDHCGVRECAKPTDAGPKPTTGPKPTTTTTTTTKPTTRPKPTTTTTTTTKPTTRPKPTTTTTTTTPKPKPTPAKPSAGPEKPTAPKPSGVPRQTTASPTSDKQFTSCGKPQPKKAITRIYGGLKAVPGAQPWQLSLQVRPKGSSQAYRHICGAVLIDSCWALTAGHCIDPKDQMQVVAGSLTLGKDVPIGQTITVEKATRHENYKETSRAVYNDIAVLKLKATDGRCARESQFVKAACLPNSPVTDGTECTISGWGTTEDSDNGSNHLLDAQVLLISQESCSSSKVYGSAIDNTMFCAGYQQGGVDSCQGDSGGPLTCNKEGSHFIYGIVSWGDQCGLKNKPGVYTRVSHYLDWIKSKTQAA
SIO_010081: habp2
subclass of: SO_0000673
so part of: habp2
location: complement(join(1920979..1921140,1921340..1921485,1921791..1921925,1922407..1922549,1925898..1926360,1926601..1926698,1927872..1928049,1928245..1928355,1928512..1928628,1928817..1928927,1930314..1930397,1930585..1930681,1931034..1931093))
location: region:1920979-1931093:-1
so has part: feature:1931034-1931093:-1:exon
so has part: feature:1930585-1930681:-1:exon
so has part: feature:1930314-1930397:-1:exon
so has part: feature:1928817-1928927:-1:exon
so has part: feature:1928512-1928628:-1:exon
so has part: feature:1928245-1928355:-1:exon
so has part: feature:1927872-1928049:-1:exon
so has part: feature:1926601-1926698:-1:exon
so has part: feature:1925898-1926360:-1:exon
so has part: feature:1922407-1922549:-1:exon
so has part: feature:1921791-1921925:-1:exon
so has part: feature:1921340-1921485:-1:exon
so has part: feature:1920979-1921140:-1:exon

XP_023825824.1
type: Protein
SIO_000068: ncbiprotein

position:1920979:-1
position: 1920979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1931093:-1
position: 1931093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1931034-1931093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930585-1930681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1930314-1930397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1928817-1928927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1928512-1928628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1928245-1928355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1927872-1928049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1926601-1926698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1925898-1926360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1922407-1922549:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1921791-1921925:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1921340-1921485:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1920979-1921140:-1:exon

habp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: habp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan-binding protein 2 isoform X1
translation: MNSKPLFFCLFLVLLILPVQLHKQEKHGKHQKQEKHTKKTERKYRRHEDILKDPFFEIVDEPGEDDSDEPDWLYELQEPDGQCNPNPCLNNGVCEEKGKRRFKCDCPKPFKGKKCQKGPKRCNRGTCGRGECVLTSKPPFYACKCKQPFLPPDCKSLAVCQPNPCKNGGLCVKDGMDFDCLCPEGFSGRFCNVGPDDCYKLKDDGESYRGNVSETDDGEECLYWNSHFILEKGSDPFNDFEDDDGLGPHNFCRNPDGDTQPWCFIRRGRVLLWDHCGVRECAKPTAMVTTDAGPKPTTGPKPTTTTTTTTKPTTRPKPTTTTTTTTKPTTRPKPTTTTTTTTPKPKPTPAKPSAGPEKPTAPKPSGVPRQTTASPTSDKQFTSCGKPQPKKAITRIYGGLKAVPGAQPWQLSLQVRPKGSSQAYRHICGAVLIDSCWALTAGHCIDPKDQMQVVAGSLTLGKDVPIGQTITVEKATRHENYKETSRAVYNDIAVLKLKATDGRCARESQFVKAACLPNSPVTDGTECTISGWGTTEDSDNGSNHLLDAQVLLISQESCSSSKVYGSAIDNTMFCAGYQQGGVDSCQGDSGGPLTCNKEGSHFIYGIVSWGDQCGLKNKPGVYTRVSHYLDWIKSKTQAA
SIO_010081: habp2
subclass of: SO_0000673
so part of: habp2
location: complement(join(1920979..1921140,1921340..1921485,1921791..1921925,1922407..1922549,1925898..1926375,1926601..1926698,1927872..1928049,1928245..1928355,1928512..1928628,1928817..1928927,1930314..1930397,1930585..1930681,1931034..1931093))
location: region:1920979-1931093:-1
so has part: feature:1931034-1931093:-1:exon
so has part: feature:1930585-1930681:-1:exon
so has part: feature:1930314-1930397:-1:exon
so has part: feature:1928817-1928927:-1:exon
so has part: feature:1928512-1928628:-1:exon
so has part: feature:1928245-1928355:-1:exon
so has part: feature:1927872-1928049:-1:exon
so has part: feature:1926601-1926698:-1:exon
so has part: feature:1925898-1926375:-1:exon
so has part: feature:1922407-1922549:-1:exon
so has part: feature:1921791-1921925:-1:exon
so has part: feature:1921340-1921485:-1:exon
so has part: feature:1920979-1921140:-1:exon

XP_023825823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1931034-1931093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930585-1930681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1930314-1930397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1928817-1928927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1928512-1928628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1928245-1928355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1927872-1928049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1926601-1926698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1925898-1926375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1922407-1922549:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1921791-1921925:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1921340-1921485:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1920979-1921140:-1:exon

LOC111951819
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1931741..1942617)
location: region:1931741-1942617:-1
so has part: feature:1931741-1942617:-1:exon
subclass of: SO_0000010

111951819
type: Gene
SIO_000068: ncbigene

position:1931741:-1
position: 1931741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942617:-1
position: 1942617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1931741-1942617:-1:exon

LOC111951819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951819
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_023970057.1
SIO_010081: LOC111951819
subclass of: SO_0000673
so part of: LOC111951819
location: complement(join(1931741..1932508,1934256..1934398,1934588..1934607,1934742..1934978,1941378..1941473,1941566..1942617))
location: region:1931741-1942617:-1
so has part: feature:1941566-1942617:-1:exon
so has part: feature:1941378-1941473:-1:exon
so has part: feature:1934742-1934978:-1:exon
so has part: feature:1934588-1934607:-1:exon
so has part: feature:1934256-1934398:-1:exon
so has part: feature:1931741-1932508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1941566-1942617:-1:exon

position:1941566:-1
position: 1941566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1941378-1941473:-1:exon

position:1941378:-1
position: 1941378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941473:-1
position: 1941473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1934742-1934978:-1:exon

position:1934742:-1
position: 1934742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934978:-1
position: 1934978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1934588-1934607:-1:exon

position:1934588:-1
position: 1934588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934607:-1
position: 1934607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1934256-1934398:-1:exon

position:1934256:-1
position: 1934256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934398:-1
position: 1934398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1931741-1932508:-1:exon

position:1932508:-1
position: 1932508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MEMKTQDQEMLLKHQECLKRQREAVKFRMKKLSTKQTEIAKKSSAMRESIRKKYEDIQRVLDEDLAMTLTHLEMEERAAVTALEDLMEKNCTIIQEIEQDLARLTAELAQKDILLPYSLDTEIVGRVIDLLSRTDPSKVNLDEPKADQILSLTNNMLLLIRSQTPITKRLIKSYSTEVSLDPDTAHPKLIISPRGDSATYTDTWQELPELPGRFDTTLNVISLQGFSSGRHYWEIDVAGKTYWELGLTYPTISRKGRAEDCWLGRGSDSWAVEFFDGEYTAWHSGVPHQLPVTKHFSRIGVLCSFPAGLVSFLGADSMTPLFSFCAGAFRDCLHLALCSGHDHNGTNTKPIVICNAPPPLSAFQKDSSS
SIO_010081: LOC111951819
subclass of: SO_0000673
so part of: LOC111951819
location: complement(join(1931919..1932508,1934256..1934398,1934588..1934607,1934742..1934978,1941378..1941473,1941566..1941589))
location: region:1931919-1941589:-1
so has part: feature:1941566-1941589:-1:exon
so has part: feature:1941378-1941473:-1:exon
so has part: feature:1934742-1934978:-1:exon
so has part: feature:1934588-1934607:-1:exon
so has part: feature:1934256-1934398:-1:exon
so has part: feature:1931919-1932508:-1:exon

XP_023825825.1
type: Protein
SIO_000068: ncbiprotein

position:1931919:-1
position: 1931919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941589:-1
position: 1941589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1941566-1941589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1941378-1941473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1934742-1934978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1934588-1934607:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1934256-1934398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1931919-1932508:-1:exon

LOC111951820
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1942724..2071072)
location: region:1942724-2071072:-1
so has part: feature:1942724-2071072:-1:exon
subclass of: SO_0000010

111951820
type: Gene
SIO_000068: ncbigene

position:1942724:-1
position: 1942724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2071072:-1
position: 2071072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1942724-2071072:-1:exon

LOC111951820
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951820
product: actin-binding LIM protein 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023970058.1
SIO_010081: LOC111951820
subclass of: SO_0000673
so part of: LOC111951820
location: complement(join(1942724..1944020,1944233..1944313,1947454..1947528,1948143..1948150,1948497..1948557,1950461..1950513,1956727..1956850,1957217..1957305,1958386..1958535,1960533..1960580,1963677..1963781,1975338..1975464,1975763..1975798,1975905..1975949,1976270..1976428,1977334..1977411,1980815..1980879,1981096..1981183,1988160..1988255,1988557..1988686,1989786..1989898,1991168..1991351,2007724..2007858,2070671..2071072))
location: region:1942724-2071072:-1
so has part: feature:2070671-2071072:-1:exon
so has part: feature:2007724-2007858:-1:exon
so has part: feature:1991168-1991351:-1:exon
so has part: feature:1989786-1989898:-1:exon
so has part: feature:1988557-1988686:-1:exon
so has part: feature:1988160-1988255:-1:exon
so has part: feature:1981096-1981183:-1:exon
so has part: feature:1980815-1980879:-1:exon
so has part: feature:1977334-1977411:-1:exon
so has part: feature:1976270-1976428:-1:exon
so has part: feature:1975905-1975949:-1:exon
so has part: feature:1975763-1975798:-1:exon
so has part: feature:1975338-1975464:-1:exon
so has part: feature:1963677-1963781:-1:exon
so has part: feature:1960533-1960580:-1:exon
so has part: feature:1958386-1958535:-1:exon
so has part: feature:1957217-1957305:-1:exon
so has part: feature:1956727-1956850:-1:exon
so has part: feature:1950461-1950513:-1:exon
so has part: feature:1948497-1948557:-1:exon
so has part: feature:1948143-1948150:-1:exon
so has part: feature:1947454-1947528:-1:exon
so has part: feature:1944233-1944313:-1:exon
so has part: feature:1942724-1944020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2070671-2071072:-1:exon

position:2070671:-1
position: 2070671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2007724-2007858:-1:exon

position:2007724:-1
position: 2007724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007858:-1
position: 2007858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1991168-1991351:-1:exon

position:1991168:-1
position: 1991168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1991351:-1
position: 1991351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1989786-1989898:-1:exon

position:1989786:-1
position: 1989786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989898:-1
position: 1989898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1988557-1988686:-1:exon

position:1988557:-1
position: 1988557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988686:-1
position: 1988686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1988160-1988255:-1:exon

position:1988160:-1
position: 1988160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988255:-1
position: 1988255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1981096-1981183:-1:exon

position:1981096:-1
position: 1981096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1981183:-1
position: 1981183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1980815-1980879:-1:exon

position:1980815:-1
position: 1980815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980879:-1
position: 1980879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1977334-1977411:-1:exon

position:1977334:-1
position: 1977334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1977411:-1
position: 1977411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1976270-1976428:-1:exon

position:1976270:-1
position: 1976270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1976428:-1
position: 1976428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1975905-1975949:-1:exon

position:1975905:-1
position: 1975905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975949:-1
position: 1975949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1975763-1975798:-1:exon

position:1975763:-1
position: 1975763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975798:-1
position: 1975798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1975338-1975464:-1:exon

position:1975338:-1
position: 1975338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975464:-1
position: 1975464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1963677-1963781:-1:exon

position:1963677:-1
position: 1963677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963781:-1
position: 1963781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1960533-1960580:-1:exon

position:1960533:-1
position: 1960533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960580:-1
position: 1960580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1958386-1958535:-1:exon

position:1958386:-1
position: 1958386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1958535:-1
position: 1958535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1957217-1957305:-1:exon

position:1957217:-1
position: 1957217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1957305:-1
position: 1957305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1956727-1956850:-1:exon

position:1956727:-1
position: 1956727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956850:-1
position: 1956850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1950461-1950513:-1:exon

position:1950461:-1
position: 1950461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950513:-1
position: 1950513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1948497-1948557:-1:exon

position:1948497:-1
position: 1948497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1948557:-1
position: 1948557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1948143-1948150:-1:exon

position:1948143:-1
position: 1948143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1948150:-1
position: 1948150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1947454-1947528:-1:exon

position:1947454:-1
position: 1947454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947528:-1
position: 1947528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1944233-1944313:-1:exon

position:1944233:-1
position: 1944233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944313:-1
position: 1944313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1942724-1944020:-1:exon

position:1944020:-1
position: 1944020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951820
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: actin-binding LIM protein 1-like
translation: MGERSTVQQHKQPPYDGGLCNYAQKIGSCFGLDVAHAQDAHSSNEKPLIQCYKCGEPCKGEVLRVQSKHFHLKCFTCKVCGCDLAQGGFFMKNGDYLCTLDYQRMHGTRCNGCGDFVEGEVVTALGKTYHPACFVCTICKRPFPAGDRVTFNGKDCLCQYCVQPTSPGPGKDIIDSNCCTGCGRDIKNGQALLALERQWHLGCFKCKACQKVLTGEYISSKDGTPYCEKDYQVHFGVQCRSLCQFITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPGCKNTTRTEERHRERPSRSSSESICSRPGSSIPGSPGHTIYAKVDNEILDYRDLAAIPKVKAIYDIEHPDLITYEPLYTMSLDEREERRESVGELHTARRERSPMPDDKSSRNMSPTPSAEGCYDMRERILQRSTSQGSIGSHVYNRNSYTPLSRSPQHFHRPGTDPLSGRSSPIPQRPESRPVTPPLSLTPKHFHLPDQGINIYRKPPIYKQHDSPAPKRKSADDIIRSATFPATHVPPPDDTSPTENNHWPPCSPSLALAALGSEGGRRRSREEEEEEAMKRKQIQEEQINKIQSGLGKLIMKEENEKEQIREGHARSQSAQRYEPQQNNYDGDDSKTSSLPGYGRNGLHRPQSTDFTQYNSHGDMCGGGREFQHIRDGCAAVTRMDRGVSMPNMLEPKVVPYEMLTITSRGRAKLPREVDRTRLERHLAPETFFDIFGMEIQEFDRLPLWKRNSLKKKANLF
SIO_010081: LOC111951820
subclass of: SO_0000673
so part of: LOC111951820
location: complement(join(1943907..1944020,1944233..1944313,1947454..1947528,1948143..1948150,1948497..1948557,1950461..1950513,1956727..1956850,1957217..1957305,1958386..1958535,1960533..1960580,1963677..1963781,1975338..1975464,1975763..1975798,1975905..1975949,1976270..1976428,1977334..1977411,1980815..1980879,1981096..1981183,1988160..1988255,1988557..1988686,1989786..1989898,1991168..1991351,2007724..2007858,2070671..2070770))
location: region:1943907-2070770:-1
so has part: feature:2070671-2070770:-1:exon
so has part: feature:2007724-2007858:-1:exon
so has part: feature:1991168-1991351:-1:exon
so has part: feature:1989786-1989898:-1:exon
so has part: feature:1988557-1988686:-1:exon
so has part: feature:1988160-1988255:-1:exon
so has part: feature:1981096-1981183:-1:exon
so has part: feature:1980815-1980879:-1:exon
so has part: feature:1977334-1977411:-1:exon
so has part: feature:1976270-1976428:-1:exon
so has part: feature:1975905-1975949:-1:exon
so has part: feature:1975763-1975798:-1:exon
so has part: feature:1975338-1975464:-1:exon
so has part: feature:1963677-1963781:-1:exon
so has part: feature:1960533-1960580:-1:exon
so has part: feature:1958386-1958535:-1:exon
so has part: feature:1957217-1957305:-1:exon
so has part: feature:1956727-1956850:-1:exon
so has part: feature:1950461-1950513:-1:exon
so has part: feature:1948497-1948557:-1:exon
so has part: feature:1948143-1948150:-1:exon
so has part: feature:1947454-1947528:-1:exon
so has part: feature:1944233-1944313:-1:exon
so has part: feature:1943907-1944020:-1:exon

XP_023825826.1
type: Protein
SIO_000068: ncbiprotein

position:1943907:-1
position: 1943907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2070770:-1
position: 2070770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2070671-2070770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2007724-2007858:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1991168-1991351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1989786-1989898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1988557-1988686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1988160-1988255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1981096-1981183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1980815-1980879:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1977334-1977411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1976270-1976428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1975905-1975949:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1975763-1975798:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1975338-1975464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1963677-1963781:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1960533-1960580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1958386-1958535:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1957217-1957305:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1956727-1956850:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1950461-1950513:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1948497-1948557:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1948143-1948150:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1947454-1947528:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1944233-1944313:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1943907-1944020:-1:exon

LOC111951821
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2018235..2144934
location: region:2018235-2144934:1
so has part: feature:2018235-2144934:1:exon
subclass of: SO_0000011

111951821
type: Gene
SIO_000068: ncbigene

position:2018235:1
position: 2018235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2144934:1
position: 2144934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018235-2144934:1:exon

LOC111951821
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111951821
product: uncharacterized LOC111951821
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002875649.1
SIO_010081: LOC111951821
subclass of: SO_0000673
so part of: LOC111951821
location: join(2018235..2018357,2073429..2073707,2144492..2144934)
location: region:2018235-2144934:1
so has part: feature:2018235-2018357:1:exon
so has part: feature:2073429-2073707:1:exon
so has part: feature:2144492-2144934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2018235-2018357:1:exon

position:2018357:1
position: 2018357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2073429-2073707:1:exon

position:2073429:1
position: 2073429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073707:1
position: 2073707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2144492-2144934:1:exon

position:2144492:1
position: 2144492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam160b1
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: fam160b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2158804..2181624
location: region:2158804-2181624:1
so has part: feature:2158804-2181624:1:exon
subclass of: SO_0000010

111952075
type: Gene
SIO_000068: ncbigene

position:2158804:1
position: 2158804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2181624:1
position: 2181624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2158804-2181624:1:exon

fam160b1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: fam160b1
product: family with sequence similarity 160 member B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_023970548.1
SIO_010081: fam160b1
subclass of: SO_0000673
so part of: fam160b1
location: join(2158804..2159079,2160087..2160165,2160316..2160485,2160773..2160877,2161004..2161126,2161409..2161615,2161793..2161989,2166058..2166172,2166403..2166479,2166620..2166812,2173185..2173348,2174055..2174201,2174319..2174409,2174711..2174854,2175088..2175228,2176254..2176357,2178074..2181624)
location: region:2158804-2181624:1
so has part: feature:2158804-2159079:1:exon
so has part: feature:2160087-2160165:1:exon
so has part: feature:2160316-2160485:1:exon
so has part: feature:2160773-2160877:1:exon
so has part: feature:2161004-2161126:1:exon
so has part: feature:2161409-2161615:1:exon
so has part: feature:2161793-2161989:1:exon
so has part: feature:2166058-2166172:1:exon
so has part: feature:2166403-2166479:1:exon
so has part: feature:2166620-2166812:1:exon
so has part: feature:2173185-2173348:1:exon
so has part: feature:2174055-2174201:1:exon
so has part: feature:2174319-2174409:1:exon
so has part: feature:2174711-2174854:1:exon
so has part: feature:2175088-2175228:1:exon
so has part: feature:2176254-2176357:1:exon
so has part: feature:2178074-2181624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2158804-2159079:1:exon

position:2159079:1
position: 2159079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2160087-2160165:1:exon

position:2160087:1
position: 2160087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160165:1
position: 2160165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2160316-2160485:1:exon

position:2160316:1
position: 2160316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160485:1
position: 2160485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2160773-2160877:1:exon

position:2160773:1
position: 2160773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160877:1
position: 2160877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2161004-2161126:1:exon

position:2161004:1
position: 2161004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161126:1
position: 2161126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2161409-2161615:1:exon

position:2161409:1
position: 2161409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161615:1
position: 2161615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2161793-2161989:1:exon

position:2161793:1
position: 2161793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161989:1
position: 2161989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2166058-2166172:1:exon

position:2166058:1
position: 2166058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2166172:1
position: 2166172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2166403-2166479:1:exon

position:2166403:1
position: 2166403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2166479:1
position: 2166479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2166620-2166812:1:exon

position:2166620:1
position: 2166620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2166812:1
position: 2166812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2173185-2173348:1:exon

position:2173185:1
position: 2173185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2173348:1
position: 2173348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2174055-2174201:1:exon

position:2174055:1
position: 2174055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2174201:1
position: 2174201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2174319-2174409:1:exon

position:2174319:1
position: 2174319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2174409:1
position: 2174409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2174711-2174854:1:exon

position:2174711:1
position: 2174711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2174854:1
position: 2174854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2175088-2175228:1:exon

position:2175088:1
position: 2175088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2175228:1
position: 2175228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2176254-2176357:1:exon

position:2176254:1
position: 2176254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2176357:1
position: 2176357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2178074-2181624:1:exon

position:2178074:1
position: 2178074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam160b1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: fam160b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM160B1
translation: MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQMLDILTHEESERESGETGPCMEYLLHHKILETLFTLGKADCPPGMKQQVLSFYTKLLGRIHQPLLPHINVHRPVQKLIRLCGEILAAPTENEEIQFLCIVCAKLKQDPYLVNFFLENKVKRPDPKRPGVEGVREDLASPDTGQPQAEGQAAESREEPKSAAAQSNNNKVNNYNIVTSLLNLTKSPDGRIVVKACEGLMLLVSLPEPAAAKCLTENTELCELLTDRLSAFYKALPMSMDPLDIETVESVNWGLDVYNMKDDAAIFTGKRALISFLSWLDYCDQLIKEAQKTAAAVLAKAVRERFFVAVMEPQLMQTSELGILTSTALLNRIIRQVTSEALLQDMVYFLLGEEKGPETLASIAQNPLRHRLIEHCDHLSDEISIMTLRLFEHLIQKPNQHVLHSLMLRSLEERNYLENKPQEEREPVENGQPHDFIDLEEDPLFGDDFSPENRLASPDWLSNSPTQSPYHAKPDGKTEVHKIVNSFLCLVPDEAKSSSHVEGTGYDTYLRDAHRQFRDYCGICQRWDWRGTPKAMEKCDLDSPFFEGHFLKVLFDRMGRILDQPYDVNLHVTSVLSKLSLLPHPHMHEYLLDPYINLGPGCRSLFSVIVRVVGDLMLRIQRIPDFTPKLLLVRKRLLGLEPEGLNIDHMTLLEGVIVLEEFCKELAAIAFVKFHATASTSP
SIO_010081: fam160b1
subclass of: SO_0000673
so part of: fam160b1
location: join(2159035..2159079,2160087..2160165,2160316..2160485,2160773..2160877,2161004..2161126,2161409..2161615,2161793..2161989,2166058..2166172,2166403..2166479,2166620..2166812,2173185..2173348,2174055..2174201,2174319..2174409,2174711..2174854,2175088..2175228,2176254..2176357,2178074..2178185)
location: region:2159035-2178185:1
so has part: feature:2159035-2159079:1:exon
so has part: feature:2160087-2160165:1:exon
so has part: feature:2160316-2160485:1:exon
so has part: feature:2160773-2160877:1:exon
so has part: feature:2161004-2161126:1:exon
so has part: feature:2161409-2161615:1:exon
so has part: feature:2161793-2161989:1:exon
so has part: feature:2166058-2166172:1:exon
so has part: feature:2166403-2166479:1:exon
so has part: feature:2166620-2166812:1:exon
so has part: feature:2173185-2173348:1:exon
so has part: feature:2174055-2174201:1:exon
so has part: feature:2174319-2174409:1:exon
so has part: feature:2174711-2174854:1:exon
so has part: feature:2175088-2175228:1:exon
so has part: feature:2176254-2176357:1:exon
so has part: feature:2178074-2178185:1:exon

XP_023826316.1
type: Protein
SIO_000068: ncbiprotein

position:2159035:1
position: 2159035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2178185:1
position: 2178185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2159035-2159079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2160087-2160165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2160316-2160485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2160773-2160877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2161004-2161126:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2161409-2161615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2161793-2161989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2166058-2166172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2166403-2166479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2166620-2166812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2173185-2173348:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2174055-2174201:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2174319-2174409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2174711-2174854:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2175088-2175228:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2176254-2176357:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2178074-2178185:1:exon

LOC111951921
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2183475..2244638)
location: region:2183475-2244638:-1
so has part: feature:2183475-2244638:-1:exon
subclass of: SO_0000010

111951921
type: Gene
SIO_000068: ncbigene

position:2183475:-1
position: 2183475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2244638:-1
position: 2244638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2183475-2244638:-1:exon

LOC111951921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951921
product: serum response factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_023970270.2
SIO_010081: LOC111951921
subclass of: SO_0000673
so part of: LOC111951921
location: complement(join(2183475..2184260,2185681..2185757,2186219..2186347,2186598..2186699,2188830..2188991,2198234..2198471,2227501..2227767,2243517..2244638))
location: region:2183475-2244638:-1
so has part: feature:2243517-2244638:-1:exon
so has part: feature:2227501-2227767:-1:exon
so has part: feature:2198234-2198471:-1:exon
so has part: feature:2188830-2188991:-1:exon
so has part: feature:2186598-2186699:-1:exon
so has part: feature:2186219-2186347:-1:exon
so has part: feature:2185681-2185757:-1:exon
so has part: feature:2183475-2184260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2243517-2244638:-1:exon

position:2243517:-1
position: 2243517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2227501-2227767:-1:exon

position:2227501:-1
position: 2227501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227767:-1
position: 2227767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2198234-2198471:-1:exon

position:2198234:-1
position: 2198234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2198471:-1
position: 2198471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2188830-2188991:-1:exon

position:2188830:-1
position: 2188830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2188991:-1
position: 2188991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2186598-2186699:-1:exon

position:2186598:-1
position: 2186598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2186699:-1
position: 2186699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2186219-2186347:-1:exon

position:2186219:-1
position: 2186219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2186347:-1
position: 2186347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2185681-2185757:-1:exon

position:2185681:-1
position: 2185681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2185757:-1
position: 2185757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2183475-2184260:-1:exon

position:2184260:-1
position: 2184260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951921
product: serum response factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_023970271.2
SIO_010081: LOC111951921
subclass of: SO_0000673
so part of: LOC111951921
location: complement(join(2183475..2184260,2185656..2185757,2186219..2186347,2186598..2186699,2188830..2188991,2198234..2198471,2227501..2227767,2243517..2244638))
location: region:2183475-2244638:-1
so has part: feature:2243517-2244638:-1:exon
so has part: feature:2227501-2227767:-1:exon
so has part: feature:2198234-2198471:-1:exon
so has part: feature:2188830-2188991:-1:exon
so has part: feature:2186598-2186699:-1:exon
so has part: feature:2186219-2186347:-1:exon
so has part: feature:2185656-2185757:-1:exon
so has part: feature:2183475-2184260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2243517-2244638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2227501-2227767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198234-2198471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188830-2188991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2186598-2186699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2186219-2186347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185656-2185757:-1:exon

position:2185656:-1
position: 2185656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2183475-2184260:-1:exon

LOC111951921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951921
product: serum response factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023970268.2
SIO_010081: LOC111951921
subclass of: SO_0000673
so part of: LOC111951921
location: complement(join(2183475..2184260,2185681..2185757,2186177..2186347,2186598..2186699,2188830..2188991,2198234..2198471,2227501..2227767,2243517..2244638))
location: region:2183475-2244638:-1
so has part: feature:2243517-2244638:-1:exon
so has part: feature:2227501-2227767:-1:exon
so has part: feature:2198234-2198471:-1:exon
so has part: feature:2188830-2188991:-1:exon
so has part: feature:2186598-2186699:-1:exon
so has part: feature:2186177-2186347:-1:exon
so has part: feature:2185681-2185757:-1:exon
so has part: feature:2183475-2184260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2243517-2244638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2227501-2227767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198234-2198471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188830-2188991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2186598-2186699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2186177-2186347:-1:exon

position:2186177:-1
position: 2186177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2185681-2185757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2183475-2184260:-1:exon

LOC111951921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951921
product: serum response factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_023970269.2
SIO_010081: LOC111951921
subclass of: SO_0000673
so part of: LOC111951921
location: complement(join(2183475..2184260,2185656..2185757,2186177..2186347,2186598..2186699,2188830..2188991,2198234..2198471,2227501..2227767,2243517..2244638))
location: region:2183475-2244638:-1
so has part: feature:2243517-2244638:-1:exon
so has part: feature:2227501-2227767:-1:exon
so has part: feature:2198234-2198471:-1:exon
so has part: feature:2188830-2188991:-1:exon
so has part: feature:2186598-2186699:-1:exon
so has part: feature:2186177-2186347:-1:exon
so has part: feature:2185656-2185757:-1:exon
so has part: feature:2183475-2184260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2243517-2244638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2227501-2227767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198234-2198471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188830-2188991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2186598-2186699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2186177-2186347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185656-2185757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2183475-2184260:-1:exon

LOC111951921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum response factor isoform X3
translation: MLPSQAGSAQSGNGSASSRANTGHGSGVIGIRPVLVRARQSKTRVSDSISAVGMLGGNSPGVGARGGARPGNGTGPTIPQTAAQGGIGLNMGIGVRGGSRYDPDKECAPMGCSGSDADSDSGDDDDPMGSIGDNRRSVKRERLEMEATETGQGAGIQSGGYGVVPQGVAGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTRSCYWWPAETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSESESLGETKDQLKPAFTVASLPGTTSTHAPTAPTTSTTMQVSSGPSFPITNYLAPISASSNVNGTVLKTTGASGGQVMQLPSGFTFMSAGTPLPPGTPTIPLSQLHQHSLAISGQRGQKLTASQLTQQGQQAVFRFPAAVSLGGGMTQQLQAIQVHPTTHTNDSSSEISQTSTVSSATIVTSSVPTSMAGHMMYTSPHTVMYASSPSAMQVSHGQGQDTGAVPQVFLTAPSGTMQIPVSAVQLHPMVIGQQLSSSSSNLTELQVVNLDTTQNTKND
SIO_010081: LOC111951921
subclass of: SO_0000673
so part of: LOC111951921
location: complement(join(2184165..2184260,2185681..2185757,2186219..2186347,2186598..2186699,2188830..2188991,2198234..2198471,2227501..2227767,2243517..2244140))
location: region:2184165-2244140:-1
so has part: feature:2243517-2244140:-1:exon
so has part: feature:2227501-2227767:-1:exon
so has part: feature:2198234-2198471:-1:exon
so has part: feature:2188830-2188991:-1:exon
so has part: feature:2186598-2186699:-1:exon
so has part: feature:2186219-2186347:-1:exon
so has part: feature:2185681-2185757:-1:exon
so has part: feature:2184165-2184260:-1:exon

XP_023826038.1
type: Protein
SIO_000068: ncbiprotein

position:2184165:-1
position: 2184165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2244140:-1
position: 2244140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2243517-2244140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2227501-2227767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198234-2198471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188830-2188991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2186598-2186699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2186219-2186347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185681-2185757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2184165-2184260:-1:exon

LOC111951921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum response factor isoform X1
translation: MLPSQAGSAQSGNGSASSRANTGHGSGVIGIRPVLVRARQSKTRVSDSISAVGMLGGNSPGVGARGGARPGNGTGPTIPQTAAQGGIGLNMGIGVRGGSRYDPDKECAPMGCSGSDADSDSGDDDDPMGSIGDNRRSVKRERLEMEATETGQGAGIQSGGYGVVPQGVAGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTRSCYWWPAETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSESESLGETKDQLKPAFTVASLPGTTSTHAPTAPTTSTTMQVSSGPSFPITNYLAPISASSNVNGTVLKTTGASGGQVMQLPSGFTFMSAGTPLPPGTPTIPLSQLHQHSLAISGQRGQKLTASQLTQQGQQAVFRFPAAVSLGGGMTQQLQAIQVHPTTHTNDSSSEISQTSTVSSATIVTSSVPTSMAGHMMYTSPHTVMYASSPSAMQVSHGQGQDTGETTLDYSRLRWDTGAVPQVFLTAPSGTMQIPVSAVQLHPMVIGQQLSSSSSNLTELQVVNLDTTQNTKND
SIO_010081: LOC111951921
subclass of: SO_0000673
so part of: LOC111951921
location: complement(join(2184165..2184260,2185681..2185757,2186177..2186347,2186598..2186699,2188830..2188991,2198234..2198471,2227501..2227767,2243517..2244140))
location: region:2184165-2244140:-1
so has part: feature:2243517-2244140:-1:exon
so has part: feature:2227501-2227767:-1:exon
so has part: feature:2198234-2198471:-1:exon
so has part: feature:2188830-2188991:-1:exon
so has part: feature:2186598-2186699:-1:exon
so has part: feature:2186177-2186347:-1:exon
so has part: feature:2185681-2185757:-1:exon
so has part: feature:2184165-2184260:-1:exon

XP_023826036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2243517-2244140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2227501-2227767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198234-2198471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188830-2188991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2186598-2186699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2186177-2186347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185681-2185757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2184165-2184260:-1:exon

LOC111951921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum response factor isoform X4
translation: MLPSQAGSAQSGNGSASSRANTGHGSGVIGIRPVLVRARQSKTRVSDSISAVGMLGGNSPGVGARGGARPGNGTGPTIPQTAAQGGIGLNMGIGVRGGSRYDPDKECAPMGCSGSDADSDSGDDDDPMGSIGDNRRSVKRERLEMEATETGQGAGIQSGGYGVVPQGVAGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTRSCYWWPAETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSESESLGETKDQLKPAFTVASLPGTTSTHAPTAPTTSTTMQVSSGPSFPITNYLAPISASSNVNGTVLKTTGASGGQVMQLPSGFTFMSAGTPLPPGTPTIPLSQLHQHSLAISGQRGQKLTASQLTQQGQQAVFRFPAAVSLGGGMTQQLQAIQVHPTTHTNDSSSEISQTSTVSSATIVTSSVPTSMAGHMMYTSPHTVMYASSPSAMQVSHGQGQDTGAVPQVFLTAPSGTMQIPVSAVQLHPVRQDLHFTNGDWSAVEQQQQ
SIO_010081: LOC111951921
subclass of: SO_0000673
so part of: LOC111951921
location: complement(join(2184223..2184260,2185656..2185757,2186219..2186347,2186598..2186699,2188830..2188991,2198234..2198471,2227501..2227767,2243517..2244140))
location: region:2184223-2244140:-1
so has part: feature:2243517-2244140:-1:exon
so has part: feature:2227501-2227767:-1:exon
so has part: feature:2198234-2198471:-1:exon
so has part: feature:2188830-2188991:-1:exon
so has part: feature:2186598-2186699:-1:exon
so has part: feature:2186219-2186347:-1:exon
so has part: feature:2185656-2185757:-1:exon
so has part: feature:2184223-2184260:-1:exon

XP_023826039.1
type: Protein
SIO_000068: ncbiprotein

position:2184223:-1
position: 2184223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2243517-2244140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2227501-2227767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198234-2198471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188830-2188991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2186598-2186699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2186219-2186347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185656-2185757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2184223-2184260:-1:exon

LOC111951921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum response factor isoform X2
translation: MLPSQAGSAQSGNGSASSRANTGHGSGVIGIRPVLVRARQSKTRVSDSISAVGMLGGNSPGVGARGGARPGNGTGPTIPQTAAQGGIGLNMGIGVRGGSRYDPDKECAPMGCSGSDADSDSGDDDDPMGSIGDNRRSVKRERLEMEATETGQGAGIQSGGYGVVPQGVAGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTRSCYWWPAETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSESESLGETKDQLKPAFTVASLPGTTSTHAPTAPTTSTTMQVSSGPSFPITNYLAPISASSNVNGTVLKTTGASGGQVMQLPSGFTFMSAGTPLPPGTPTIPLSQLHQHSLAISGQRGQKLTASQLTQQGQQAVFRFPAAVSLGGGMTQQLQAIQVHPTTHTNDSSSEISQTSTVSSATIVTSSVPTSMAGHMMYTSPHTVMYASSPSAMQVSHGQGQDTGETTLDYSRLRWDTGAVPQVFLTAPSGTMQIPVSAVQLHPVRQDLHFTNGDWSAVEQQQQ
SIO_010081: LOC111951921
subclass of: SO_0000673
so part of: LOC111951921
location: complement(join(2184223..2184260,2185656..2185757,2186177..2186347,2186598..2186699,2188830..2188991,2198234..2198471,2227501..2227767,2243517..2244140))
location: region:2184223-2244140:-1
so has part: feature:2243517-2244140:-1:exon
so has part: feature:2227501-2227767:-1:exon
so has part: feature:2198234-2198471:-1:exon
so has part: feature:2188830-2188991:-1:exon
so has part: feature:2186598-2186699:-1:exon
so has part: feature:2186177-2186347:-1:exon
so has part: feature:2185656-2185757:-1:exon
so has part: feature:2184223-2184260:-1:exon

XP_023826037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2243517-2244140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2227501-2227767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198234-2198471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188830-2188991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2186598-2186699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2186177-2186347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185656-2185757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2184223-2184260:-1:exon

LOC111951792
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2253717..2426983)
location: region:2253717-2426983:-1
so has part: feature:2253717-2426983:-1:exon
subclass of: SO_0000010

111951792
type: Gene
SIO_000068: ncbigene

position:2253717:-1
position: 2253717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2426983:-1
position: 2426983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2253717-2426983:-1:exon

LOC111951792
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951792
product: inactive tyrosine-protein kinase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_023970005.1
SIO_010081: LOC111951792
subclass of: SO_0000673
so part of: LOC111951792
location: complement(join(2253717..2255513,2256339..2256517,2257730..2257881,2258283..2258363,2261068..2261300,2261553..2261711,2263222..2263422,2265421..2265548,2267176..2267320,2268674..2268823,2270744..2270863,2271238..2271373,2271539..2271675,2271887..2272153,2285148..2285278,2298495..2298642,2300844..2301028,2303444..2303546,2323849..2324145,2426447..2426983))
location: region:2253717-2426983:-1
so has part: feature:2426447-2426983:-1:exon
so has part: feature:2323849-2324145:-1:exon
so has part: feature:2303444-2303546:-1:exon
so has part: feature:2300844-2301028:-1:exon
so has part: feature:2298495-2298642:-1:exon
so has part: feature:2285148-2285278:-1:exon
so has part: feature:2271887-2272153:-1:exon
so has part: feature:2271539-2271675:-1:exon
so has part: feature:2271238-2271373:-1:exon
so has part: feature:2270744-2270863:-1:exon
so has part: feature:2268674-2268823:-1:exon
so has part: feature:2267176-2267320:-1:exon
so has part: feature:2265421-2265548:-1:exon
so has part: feature:2263222-2263422:-1:exon
so has part: feature:2261553-2261711:-1:exon
so has part: feature:2261068-2261300:-1:exon
so has part: feature:2258283-2258363:-1:exon
so has part: feature:2257730-2257881:-1:exon
so has part: feature:2256339-2256517:-1:exon
so has part: feature:2253717-2255513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2426447-2426983:-1:exon

position:2426447:-1
position: 2426447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2323849-2324145:-1:exon

position:2323849:-1
position: 2323849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2324145:-1
position: 2324145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2303444-2303546:-1:exon

position:2303444:-1
position: 2303444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2303546:-1
position: 2303546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2300844-2301028:-1:exon

position:2300844:-1
position: 2300844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2301028:-1
position: 2301028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2298495-2298642:-1:exon

position:2298495:-1
position: 2298495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2298642:-1
position: 2298642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2285148-2285278:-1:exon

position:2285148:-1
position: 2285148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2285278:-1
position: 2285278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2271887-2272153:-1:exon

position:2271887:-1
position: 2271887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2272153:-1
position: 2272153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2271539-2271675:-1:exon

position:2271539:-1
position: 2271539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2271675:-1
position: 2271675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2271238-2271373:-1:exon

position:2271238:-1
position: 2271238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2271373:-1
position: 2271373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2270744-2270863:-1:exon

position:2270744:-1
position: 2270744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2270863:-1
position: 2270863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2268674-2268823:-1:exon

position:2268674:-1
position: 2268674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2268823:-1
position: 2268823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2267176-2267320:-1:exon

position:2267176:-1
position: 2267176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2267320:-1
position: 2267320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2265421-2265548:-1:exon

position:2265421:-1
position: 2265421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2265548:-1
position: 2265548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2263222-2263422:-1:exon

position:2263222:-1
position: 2263222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2263422:-1
position: 2263422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2261553-2261711:-1:exon

position:2261553:-1
position: 2261553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261711:-1
position: 2261711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2261068-2261300:-1:exon

position:2261068:-1
position: 2261068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261300:-1
position: 2261300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2258283-2258363:-1:exon

position:2258283:-1
position: 2258283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258363:-1
position: 2258363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2257730-2257881:-1:exon

position:2257730:-1
position: 2257730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257881:-1
position: 2257881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2256339-2256517:-1:exon

position:2256339:-1
position: 2256339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2256517:-1
position: 2256517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2253717-2255513:-1:exon

position:2255513:-1
position: 2255513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951792
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase 7
translation: MELSTKNDRQRREGNTNSEVTNTRKPPVATFLSIGIICMKVLCIQAAPIQFTKEPKSQDALHGRSAMLRCEVSDPADIQYGWLNNGQPLDDTERRFREVSNLKFTAVDRRVDAGNFECVATNTVTGEEAHSTNASFNIKWLESGGVTLKEPATEAEIESSAPVTLRCHIDGHPRPTCQWFRDGMRLTEKTHQINNKERTLTFKSASPDDNGLYYCCAKNAAGHVCSNANFTLNIIDKSFPRPVVTPRDQVVLKNEEAVFHCQFTAVPEPTVEWYYDTELLTNKSRVILYTNGTLIITQVKPRNTGSYRCVGRGPRGPDVTLEASLLIAEIEDMSPRQSRVFTADTMQRVSCTAPRGKPQPEVWWEREGVRVPTEGRVYQEGSELVFSPTEQGDSGSYTCVAQNKAGRKTQELTVTVATAPVWVTKPQDSYLEEGRPGYLHCHAQATPEPEVTWHRNSIMVMPEDPRFTVFPNGTLRINNVEVYDGQMYACVSRTEGGKLSGNARVYVLEKLKFTPTPQPSQCLELDKEVNIQCSATGRETPTIKWTKADGGELLPHVEMRNSQLHFTKVTRSDAGNYTCIASNSLQGEIRAMVSLTVAVYIRFKLEPENTTVYQGHTAILHCQATADPEPRVQWMVKDKVLDTSRRRFQLMVNGSLVITDVTTDDTGKYTCIAGNSCSISDRVAQLYVVEKPVQTLVDHEEKAPYKMIQTIGLSVGAAVAYIIVVLGLMFYCKKRRNAKRLQKGQEGEEPEMECLNRGAVQQNGHTTAEIQEEVALTSXGTTAAAEKRHSSANEKLQFPRADLHTITTLGKGEFGEVLLAKAKGIEEGEEETVVLVKSLQSKDEQLQLDFRREADMFSKLSHGNVVRLLGLCREAEPHYMILEYYDLGDLKQFLRISNSKDEKIKSQPITTKTRVSICAQVAHGMEHMSNHRFVHKDLAARNCLISGQRSVKISAPSLSKDVYNSEYYHYRQAWIPLRWLPAESVFEDDFSTKSDVWAFGVLMWEVFSHGELPYTKLGDDEVLEGLQAGKMKLPALDGCPSKVYKLMCRCWAPSLKERPSFSEVVNTLGDLSSDSNV
SIO_010081: LOC111951792
subclass of: SO_0000673
so part of: LOC111951792
location: complement(join(2255353..2255513,2256339..2256517,2257730..2257881,2258283..2258363,2261068..2261300,2261553..2261711,2263222..2263422,2265421..2265548,2267176..2267320,2268674..2268823,2270744..2270863,2271238..2271373,2271539..2271675,2271887..2272153,2285148..2285278,2298495..2298642,2300844..2301028,2303444..2303546,2323849..2324145,2426447..2426567))
location: region:2255353-2426567:-1
so has part: feature:2426447-2426567:-1:exon
so has part: feature:2323849-2324145:-1:exon
so has part: feature:2303444-2303546:-1:exon
so has part: feature:2300844-2301028:-1:exon
so has part: feature:2298495-2298642:-1:exon
so has part: feature:2285148-2285278:-1:exon
so has part: feature:2271887-2272153:-1:exon
so has part: feature:2271539-2271675:-1:exon
so has part: feature:2271238-2271373:-1:exon
so has part: feature:2270744-2270863:-1:exon
so has part: feature:2268674-2268823:-1:exon
so has part: feature:2267176-2267320:-1:exon
so has part: feature:2265421-2265548:-1:exon
so has part: feature:2263222-2263422:-1:exon
so has part: feature:2261553-2261711:-1:exon
so has part: feature:2261068-2261300:-1:exon
so has part: feature:2258283-2258363:-1:exon
so has part: feature:2257730-2257881:-1:exon
so has part: feature:2256339-2256517:-1:exon
so has part: feature:2255353-2255513:-1:exon

XP_023825773.1
type: Protein
SIO_000068: ncbiprotein

position:2255353:-1
position: 2255353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2426567:-1
position: 2426567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2426447-2426567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2323849-2324145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2303444-2303546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2300844-2301028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2298495-2298642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2285148-2285278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2271887-2272153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2271539-2271675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2271238-2271373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2270744-2270863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2268674-2268823:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2267176-2267320:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2265421-2265548:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2263222-2263422:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2261553-2261711:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2261068-2261300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2258283-2258363:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2257730-2257881:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2256339-2256517:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2255353-2255513:-1:exon

LOC111951672
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2478111..2543533
location: region:2478111-2543533:1
so has part: feature:2478111-2543533:1:exon
subclass of: SO_0000010

111951672
type: Gene
SIO_000068: ncbigene

position:2478111:1
position: 2478111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543533:1
position: 2543533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2478111-2543533:1:exon

LOC111951672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951672
product: DNA excision repair protein ERCC-6-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023969885.1
SIO_010081: LOC111951672
subclass of: SO_0000673
so part of: LOC111951672
location: join(2478111..2478318,2480451..2480677,2480852..2480971,2488853..2489018,2489094..2489204,2489447..2489787,2501508..2501687,2502176..2502304,2509188..2509322,2512954..2513127,2513344..2513521,2514324..2514444,2525141..2525237,2526471..2526699,2527331..2527413,2527684..2527778,2537702..2537847,2537952..2538647,2539909..2540078,2540242..2540320,2542248..2543533)
location: region:2478111-2543533:1
so has part: feature:2478111-2478318:1:exon
so has part: feature:2480451-2480677:1:exon
so has part: feature:2480852-2480971:1:exon
so has part: feature:2488853-2489018:1:exon
so has part: feature:2489094-2489204:1:exon
so has part: feature:2489447-2489787:1:exon
so has part: feature:2501508-2501687:1:exon
so has part: feature:2502176-2502304:1:exon
so has part: feature:2509188-2509322:1:exon
so has part: feature:2512954-2513127:1:exon
so has part: feature:2513344-2513521:1:exon
so has part: feature:2514324-2514444:1:exon
so has part: feature:2525141-2525237:1:exon
so has part: feature:2526471-2526699:1:exon
so has part: feature:2527331-2527413:1:exon
so has part: feature:2527684-2527778:1:exon
so has part: feature:2537702-2537847:1:exon
so has part: feature:2537952-2538647:1:exon
so has part: feature:2539909-2540078:1:exon
so has part: feature:2540242-2540320:1:exon
so has part: feature:2542248-2543533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2478111-2478318:1:exon

position:2478318:1
position: 2478318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2480451-2480677:1:exon

position:2480451:1
position: 2480451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2480677:1
position: 2480677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2480852-2480971:1:exon

position:2480852:1
position: 2480852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2480971:1
position: 2480971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2488853-2489018:1:exon

position:2488853:1
position: 2488853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489018:1
position: 2489018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2489094-2489204:1:exon

position:2489094:1
position: 2489094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489204:1
position: 2489204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2489447-2489787:1:exon

position:2489447:1
position: 2489447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489787:1
position: 2489787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2501508-2501687:1:exon

position:2501508:1
position: 2501508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2501687:1
position: 2501687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2502176-2502304:1:exon

position:2502176:1
position: 2502176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2502304:1
position: 2502304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2509188-2509322:1:exon

position:2509188:1
position: 2509188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2509322:1
position: 2509322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2512954-2513127:1:exon

position:2512954:1
position: 2512954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513127:1
position: 2513127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2513344-2513521:1:exon

position:2513344:1
position: 2513344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513521:1
position: 2513521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2514324-2514444:1:exon

position:2514324:1
position: 2514324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514444:1
position: 2514444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2525141-2525237:1:exon

position:2525141:1
position: 2525141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2525237:1
position: 2525237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2526471-2526699:1:exon

position:2526471:1
position: 2526471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2526699:1
position: 2526699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2527331-2527413:1:exon

position:2527331:1
position: 2527331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2527413:1
position: 2527413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2527684-2527778:1:exon

position:2527684:1
position: 2527684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2527778:1
position: 2527778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2537702-2537847:1:exon

position:2537702:1
position: 2537702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537847:1
position: 2537847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2537952-2538647:1:exon

position:2537952:1
position: 2537952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538647:1
position: 2538647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2539909-2540078:1:exon

position:2539909:1
position: 2539909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2540078:1
position: 2540078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2540242-2540320:1:exon

position:2540242:1
position: 2540242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2540320:1
position: 2540320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2542248-2543533:1:exon

position:2542248:1
position: 2542248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951672
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 2 bases in 2 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:2501641..2501643,aa:OTHER)
transl except: (pos:2502252..2502254,aa:OTHER)
product: LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like
translation: MPVEDTEDQVPISLSNPASAALTPGGMEEDGANRGTAGCSISITGTSQGDAEQPAXACPDSTGSGEGSSAIKKSGALLHIDRQRIQAVSPAPGAAEAAGLGVAVYDQDVLEQGVLQQVDQAIHEAAGCSQGRGREGVQSVLDDVRSCMAALKHINKIIEQLTPYATXSKDINRKMESVRRQERDKPGPSALGSMLMPAQETEWEELIRTGHMTPLXTRVPQKEEKKEPRKFMLSENSGFDAYLADQAKMAVDRKRPAPLKQKKKTAVARKGKRPTERWGHADPKPRTKLQAGGDEMDSEGSEYLPSDELMDPEREEREARDEGWERRMRLNYYELKPYRKKSEKKGKKGEKESAGRGSLPDSSEEDEGSGKKGKEKMKKDDGDVESYKQRIRRWRRLRLREREEKRERGEEESDQSDAEFDEGFKVPGFLWNKLFKXVTNKVTAFPNCHCILGVEYIGEERRGGERSSCLLYTSRCVXETGLSYSKLRTRGSNYRYQGLGPTVIVCPXTVMHQWVSEFHTWWPPFRVAVLHDTGSFTQTKEKLISEMAACHGVLITSYSAVRIMQETLQRYDGWHYVILDEGHKIRNPHAGITTACKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPIFMEQFSVPITMGGYSNASPVTDKVQTAYKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFVRLTEEQREVYQGYLDSKVVYQILNGDMQVFAGLIALRKMCNHPDLFSGGPKILKGIPEDQLTDEEHFGLLESVPGQALIVVEVLLDFGCKAGNTEVPAGSQVQTEWGGGSQLTGANRVYPYDPTANPSTDTQARERAWRIGQKKEVTVYRLLTAGTIEEKIYHRQIFKHFLTNRVLKDPKQRRFFKSNDVYELFTLSNPDGTQGTETSAIFAGTGSDVQAPKKPVRPRSNHRHSVTNHNVSSTGGGAIPSPSPRPGDRTTPLRSNISLNKNNRLTDSQEANQGEADIPIGQSQTECDTQHSREEGSNAHILTDPDRDQNSVLPHKHRDSPVTSPNPHKHSHTDSVSPSTQKHRDKHSPHKHRDSXGPGSSPYKHREKRKHCDSTVEGPKNKHGNQKRAKVEGHRISYLVKKRSYKGQEEREGQPEKRDQRQSDDYVLAKLFKKSGIHSVMQHDSIMEASNPDFVLVEAEANRVAKDALRALKVSRQHCRLPYNQPAPAPARKRFGQKKNPLLSAPPATXVPAQDKCKDAAIIKKTIARKPIPGVHFSGEGVEVGGSSSTTAPLSSSTLLARMKARNHLSLPQREGDEGGEEEGGARTPSGPXAPPTEHDELLVELRNFVAFQGAVDGQASTKEVLDHFTPRLTQTQTPVFRELLRNICNFHRAKGQEGTWRLKPDYR
SIO_010081: LOC111951672
subclass of: SO_0000673
so part of: LOC111951672
location: join(2478111..2478318,2480451..2480677,2480852..2480971,2488853..2489018,2489094..2489204,2489447..2489787,2501508..2501687,2502176..2502304,2509188..2509322,2512954..2513127,2513344..2513521,2514324..2514444,2525141..2525237,2526471..2526699,2527331..2527413,2527684..2527778,2537702..2537847,2537952..2538647,2539909..2540078,2540242..2540320,2542248..2542700)
location: region:2478111-2542700:1
so has part: feature:2478111-2478318:1:exon
so has part: feature:2480451-2480677:1:exon
so has part: feature:2480852-2480971:1:exon
so has part: feature:2488853-2489018:1:exon
so has part: feature:2489094-2489204:1:exon
so has part: feature:2489447-2489787:1:exon
so has part: feature:2501508-2501687:1:exon
so has part: feature:2502176-2502304:1:exon
so has part: feature:2509188-2509322:1:exon
so has part: feature:2512954-2513127:1:exon
so has part: feature:2513344-2513521:1:exon
so has part: feature:2514324-2514444:1:exon
so has part: feature:2525141-2525237:1:exon
so has part: feature:2526471-2526699:1:exon
so has part: feature:2527331-2527413:1:exon
so has part: feature:2527684-2527778:1:exon
so has part: feature:2537702-2537847:1:exon
so has part: feature:2537952-2538647:1:exon
so has part: feature:2539909-2540078:1:exon
so has part: feature:2540242-2540320:1:exon
so has part: feature:2542248-2542700:1:exon

XP_023825653.1
type: Protein
SIO_000068: ncbiprotein

position:2542700:1
position: 2542700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2478111-2478318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2480451-2480677:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2480852-2480971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2488853-2489018:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2489094-2489204:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2489447-2489787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2501508-2501687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2502176-2502304:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2509188-2509322:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2512954-2513127:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2513344-2513521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2514324-2514444:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2525141-2525237:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2526471-2526699:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2527331-2527413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2527684-2527778:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2537702-2537847:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2537952-2538647:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2539909-2540078:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2540242-2540320:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2542248-2542700:1:exon

LOC111951651
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2550798..2558106
location: region:2550798-2558106:1
so has part: feature:2550798-2558106:1:exon
subclass of: SO_0000010

111951651
type: Gene
SIO_000068: ncbigene

position:2550798:1
position: 2550798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2558106:1
position: 2558106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550798-2558106:1:exon

LOC111951651
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951651
product: dorsal root ganglia homeobox protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_023969865.1
SIO_010081: LOC111951651
subclass of: SO_0000673
so part of: LOC111951651
location: join(2550798..2551105,2551598..2551720,2552610..2552713,2553178..2553279,2555028..2555203,2555722..2555834,2555980..2558106)
location: region:2550798-2558106:1
so has part: feature:2550798-2551105:1:exon
so has part: feature:2551598-2551720:1:exon
so has part: feature:2552610-2552713:1:exon
so has part: feature:2553178-2553279:1:exon
so has part: feature:2555028-2555203:1:exon
so has part: feature:2555722-2555834:1:exon
so has part: feature:2555980-2558106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2550798-2551105:1:exon

position:2551105:1
position: 2551105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2551598-2551720:1:exon

position:2551598:1
position: 2551598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2551720:1
position: 2551720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2552610-2552713:1:exon

position:2552610:1
position: 2552610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2552713:1
position: 2552713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2553178-2553279:1:exon

position:2553178:1
position: 2553178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2553279:1
position: 2553279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2555028-2555203:1:exon

position:2555028:1
position: 2555028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2555203:1
position: 2555203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2555722-2555834:1:exon

position:2555722:1
position: 2555722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2555834:1
position: 2555834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2555980-2558106:1:exon

position:2555980:1
position: 2555980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951651
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dorsal root ganglia homeobox protein-like
translation: MFYFHCPPQLDGECCRTNTLNTNGFANHASAGDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGSTDPDGGKDQMNEGGTPPSRSLNSQSPVDQSRKQKEPLEMQQSINRAVGPGGPFFPSCLPGTLLNSATYAQALSHVATMKGGGLCSCCVPDPMGLSFLPPYGCQGNRTASVAALRMKAREHSEAVLQSANLLGAGHGHGNGVGGMSVLGVSGAGLTRPGMGPALGVVSGSVLGVSGAVGRGSRDEDPSPGSKTLTQGTGSDKHPLCPKEPLEKK
SIO_010081: LOC111951651
subclass of: SO_0000673
so part of: LOC111951651
location: join(2551663..2551720,2552610..2552713,2553178..2553279,2555028..2555203,2555722..2555834,2555980..2556383)
location: region:2551663-2556383:1
so has part: feature:2551663-2551720:1:exon
so has part: feature:2552610-2552713:1:exon
so has part: feature:2553178-2553279:1:exon
so has part: feature:2555028-2555203:1:exon
so has part: feature:2555722-2555834:1:exon
so has part: feature:2555980-2556383:1:exon

XP_023825633.1
type: Protein
SIO_000068: ncbiprotein

position:2551663:1
position: 2551663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2556383:1
position: 2556383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2551663-2551720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2552610-2552713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553178-2553279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2555028-2555203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2555722-2555834:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2555980-2556383:1:exon

LOC111951989
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2671024..2675302
location: region:2671024-2675302:1
so has part: feature:2671024-2675302:1:exon
subclass of: SO_0000010

111951989
type: Gene
SIO_000068: ncbigene

position:2671024:1
position: 2671024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2675302:1
position: 2675302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2671024-2675302:1:exon

LOC111951989
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951989
product: leucine-rich repeat-containing protein 18-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_023970386.1
SIO_010081: LOC111951989
subclass of: SO_0000673
so part of: LOC111951989
location: join(2671024..2671373,2673876..2674096,2674399..2675302)
location: region:2671024-2675302:1
so has part: feature:2671024-2671373:1:exon
so has part: feature:2673876-2674096:1:exon
so has part: feature:2674399-2675302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2671024-2671373:1:exon

position:2671373:1
position: 2671373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2673876-2674096:1:exon

position:2673876:1
position: 2673876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2674096:1
position: 2674096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2674399-2675302:1:exon

position:2674399:1
position: 2674399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951989
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 18-like
translation: MAKGGKKGGGAKGKKVTLKMAKNAVRVTTDGHRRLDLSNMGIATFPKCLLKLPDLNELDLSRNQLKKLPDFIGDLVSLRWMDLHSNQLDAIPETVSQLVALSHLNLSNNRLTSAGLPPSLGNLVRLRSLNLGMNRLDTLPPSMVGLCGLQELGLFDNLFLSLPEFIKVLPSIIRLNTKRNPLSYAQGDPGATRGEGGLEEAVYLAMEGSLCGSCLESCKKERRWMLGGRSDREGDAEVRSVPYSGLITPNSVAQANQEQWR
SIO_010081: LOC111951989
subclass of: SO_0000673
so part of: LOC111951989
location: join(2673880..2674096,2674399..2674967)
location: region:2673880-2674967:1
so has part: feature:2673880-2674096:1:exon
so has part: feature:2674399-2674967:1:exon

XP_023826154.1
type: Protein
SIO_000068: ncbiprotein

position:2673880:1
position: 2673880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2674967:1
position: 2674967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2673880-2674096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2674399-2674967:1:exon

LOC111952070
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111952070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2714961..2742486
location: region:2714961-2742486:1
so has part: feature:2714961-2742486:1:exon
subclass of: SO_0000010

111952070
type: Gene
SIO_000068: ncbigene

position:2714961:1
position: 2714961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2742486:1
position: 2742486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2714961-2742486:1:exon

LOC111952070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952070
product: putative ZDHHC-type palmitoyltransferase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_023970533.1
SIO_010081: LOC111952070
subclass of: SO_0000673
so part of: LOC111952070
location: join(2714961..2715266,2724118..2724253,2724696..2724806,2729704..2729836,2730224..2730402,2730638..2730711,2730863..2731025,2731138..2731223,2734297..2734487,2741322..2742486)
location: region:2714961-2742486:1
so has part: feature:2714961-2715266:1:exon
so has part: feature:2724118-2724253:1:exon
so has part: feature:2724696-2724806:1:exon
so has part: feature:2729704-2729836:1:exon
so has part: feature:2730224-2730402:1:exon
so has part: feature:2730638-2730711:1:exon
so has part: feature:2730863-2731025:1:exon
so has part: feature:2731138-2731223:1:exon
so has part: feature:2734297-2734487:1:exon
so has part: feature:2741322-2742486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2714961-2715266:1:exon

position:2715266:1
position: 2715266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2724118-2724253:1:exon

position:2724118:1
position: 2724118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724253:1
position: 2724253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2724696-2724806:1:exon

position:2724696:1
position: 2724696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724806:1
position: 2724806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2729704-2729836:1:exon

position:2729704:1
position: 2729704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2729836:1
position: 2729836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2730224-2730402:1:exon

position:2730224:1
position: 2730224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2730402:1
position: 2730402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2730638-2730711:1:exon

position:2730638:1
position: 2730638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2730711:1
position: 2730711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2730863-2731025:1:exon

position:2730863:1
position: 2730863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2731025:1
position: 2731025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2731138-2731223:1:exon

position:2731138:1
position: 2731138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2731223:1
position: 2731223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2734297-2734487:1:exon

position:2734297:1
position: 2734297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734487:1
position: 2734487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2741322-2742486:1:exon

position:2741322:1
position: 2741322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111952070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952070
product: putative ZDHHC-type palmitoyltransferase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023970534.1
SIO_010081: LOC111952070
subclass of: SO_0000673
so part of: LOC111952070
location: join(2714961..2715266,2724118..2724253,2724696..2724806,2729704..2729836,2730224..2730402,2730638..2730711,2730926..2731025,2731138..2731223,2734297..2734487,2741322..2742486)
location: region:2714961-2742486:1
so has part: feature:2714961-2715266:1:exon
so has part: feature:2724118-2724253:1:exon
so has part: feature:2724696-2724806:1:exon
so has part: feature:2729704-2729836:1:exon
so has part: feature:2730224-2730402:1:exon
so has part: feature:2730638-2730711:1:exon
so has part: feature:2730926-2731025:1:exon
so has part: feature:2731138-2731223:1:exon
so has part: feature:2734297-2734487:1:exon
so has part: feature:2741322-2742486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2714961-2715266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2724118-2724253:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2724696-2724806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2729704-2729836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2730224-2730402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2730638-2730711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2730926-2731025:1:exon

position:2730926:1
position: 2730926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2731138-2731223:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2734297-2734487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2741322-2742486:1:exon

LOC111952070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ZDHHC-type palmitoyltransferase 6 isoform X1
translation: MLPMPRIDGDIFDCIQRGNIDQCAHFIQHDRSILKEKGWGGFTPLHFAAFQGNRSIVNLLLSNGADPNLTCDAGMTAFHLACRHGNVYVMHQIMQHGADLRMVDHQGKTALHHGVSGGNIVAMQYLWETGMFRWCDGDMYNVTPLHLAADAGNTEVVRYLLRNKRCMVETVDEDGLTAVHVASERGCTEMCWTLLQRSGFRILHLKTYSGHTPLDLCRQGRTFRHLQLAKLLIRYMKEPPFSKPDESPLLYYWTLFFPCLIGGVILIIAAMLGGYGGITCAILFPWLARSIFSQFHRMTTYQRLANPVYLGTMIAGLFHSLVCFYYKILPPSLWGDSVLGHVSLVQFSMVLAMFWKILTQDPGELGPGDADPRYSSIADLLEKKQNPQRFCIYCELFQPDHTKHCKLCDVCVRDYDHHCLFLNRCVGRGNHRLFIIFVLSMAAAHLLFVAAAIYHLYVVVVSLEDQSLVRAVAAQFWVVTLTIMNALTIFWEAWLLTEQFDAIAMGTTTYFKPTCETRQRSLGHRWTTVLTFLLEGRRRLDYGQTGDNISIDI
SIO_010081: LOC111952070
subclass of: SO_0000673
so part of: LOC111952070
location: join(2715155..2715266,2724118..2724253,2724696..2724806,2729704..2729836,2730224..2730402,2730638..2730711,2730863..2731025,2731138..2731223,2734297..2734487,2741322..2741798)
location: region:2715155-2741798:1
so has part: feature:2715155-2715266:1:exon
so has part: feature:2724118-2724253:1:exon
so has part: feature:2724696-2724806:1:exon
so has part: feature:2729704-2729836:1:exon
so has part: feature:2730224-2730402:1:exon
so has part: feature:2730638-2730711:1:exon
so has part: feature:2730863-2731025:1:exon
so has part: feature:2731138-2731223:1:exon
so has part: feature:2734297-2734487:1:exon
so has part: feature:2741322-2741798:1:exon

XP_023826301.1
type: Protein
SIO_000068: ncbiprotein

position:2715155:1
position: 2715155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741798:1
position: 2741798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2715155-2715266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2724118-2724253:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2724696-2724806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2729704-2729836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2730224-2730402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2730638-2730711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2730863-2731025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2731138-2731223:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2734297-2734487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2741322-2741798:1:exon

LOC111952070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ZDHHC-type palmitoyltransferase 6 isoform X2
translation: MLPMPRIDGDIFDCIQRGNIDQCAHFIQHDRSILKEKGWGGFTPLHFAAFQGNRSIVNLLLSNGADPNLTCDAGMTAFHLACRHGNVYVMHQIMQHGADLRMVDHQGKTALHHGVSGGNIVAMQYLWETGMFRWCDGDMYNVTPLHLAADAGNTEVVRYLLRNKRCMVETVDEDGLTAVHVASERGCTEMCWTLLQRSGFRILHLKTYSGHTPLDLCRQGRTFRHLQLAKLLIRYMKEPPFSKPDESPPMLGGYGGITCAILFPWLARSIFSQFHRMTTYQRLANPVYLGTMIAGLFHSLVCFYYKILPPSLWGDSVLGHVSLVQFSMVLAMFWKILTQDPGELGPGDADPRYSSIADLLEKKQNPQRFCIYCELFQPDHTKHCKLCDVCVRDYDHHCLFLNRCVGRGNHRLFIIFVLSMAAAHLLFVAAAIYHLYVVVVSLEDQSLVRAVAAQFWVVTLTIMNALTIFWEAWLLTEQFDAIAMGTTTYFKPTCETRQRSLGHRWTTVLTFLLEGRRRLDYGQTGDNISIDI
SIO_010081: LOC111952070
subclass of: SO_0000673
so part of: LOC111952070
location: join(2715155..2715266,2724118..2724253,2724696..2724806,2729704..2729836,2730224..2730402,2730638..2730711,2730926..2731025,2731138..2731223,2734297..2734487,2741322..2741798)
location: region:2715155-2741798:1
so has part: feature:2715155-2715266:1:exon
so has part: feature:2724118-2724253:1:exon
so has part: feature:2724696-2724806:1:exon
so has part: feature:2729704-2729836:1:exon
so has part: feature:2730224-2730402:1:exon
so has part: feature:2730638-2730711:1:exon
so has part: feature:2730926-2731025:1:exon
so has part: feature:2731138-2731223:1:exon
so has part: feature:2734297-2734487:1:exon
so has part: feature:2741322-2741798:1:exon

XP_023826302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2715155-2715266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2724118-2724253:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2724696-2724806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2729704-2729836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2730224-2730402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2730638-2730711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2730926-2731025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2731138-2731223:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2734297-2734487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2741322-2741798:1:exon

LOC111952070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952070
product: putative ZDHHC-type palmitoyltransferase 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_023970535.1
SIO_010081: LOC111952070
subclass of: SO_0000673
so part of: LOC111952070
location: join(2715183..2715266,2724696..2724806,2729704..2729836,2730224..2730402,2730638..2730711,2730863..2731025,2731138..2731223,2734297..2734487,2741322..2742486)
location: region:2715183-2742486:1
so has part: feature:2715183-2715266:1:exon
so has part: feature:2724696-2724806:1:exon
so has part: feature:2729704-2729836:1:exon
so has part: feature:2730224-2730402:1:exon
so has part: feature:2730638-2730711:1:exon
so has part: feature:2730863-2731025:1:exon
so has part: feature:2731138-2731223:1:exon
so has part: feature:2734297-2734487:1:exon
so has part: feature:2741322-2742486:1:exon

position:2715183:1
position: 2715183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2715183-2715266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2724696-2724806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2729704-2729836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2730224-2730402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2730638-2730711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2730863-2731025:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2731138-2731223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2734297-2734487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2741322-2742486:1:exon

LOC111952070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase akr1 isoform X3
translation: MHQIMQHGADLRMVDHQGKTALHHGVSGGNIVAMQYLWETGMFRWCDGDMYNVTPLHLAADAGNTEVVRYLLRNKRCMVETVDEDGLTAVHVASERGCTEMCWTLLQRSGFRILHLKTYSGHTPLDLCRQGRTFRHLQLAKLLIRYMKEPPFSKPDESPLLYYWTLFFPCLIGGVILIIAAMLGGYGGITCAILFPWLARSIFSQFHRMTTYQRLANPVYLGTMIAGLFHSLVCFYYKILPPSLWGDSVLGHVSLVQFSMVLAMFWKILTQDPGELGPGDADPRYSSIADLLEKKQNPQRFCIYCELFQPDHTKHCKLCDVCVRDYDHHCLFLNRCVGRGNHRLFIIFVLSMAAAHLLFVAAAIYHLYVVVVSLEDQSLVRAVAAQFWVVTLTIMNALTIFWEAWLLTEQFDAIAMGTTTYFKPTCETRQRSLGHRWTTVLTFLLEGRRRLDYGQTGDNISIDI
SIO_010081: LOC111952070
subclass of: SO_0000673
so part of: LOC111952070
location: join(2724715..2724806,2729704..2729836,2730224..2730402,2730638..2730711,2730863..2731025,2731138..2731223,2734297..2734487,2741322..2741798)
location: region:2724715-2741798:1
so has part: feature:2724715-2724806:1:exon
so has part: feature:2729704-2729836:1:exon
so has part: feature:2730224-2730402:1:exon
so has part: feature:2730638-2730711:1:exon
so has part: feature:2730863-2731025:1:exon
so has part: feature:2731138-2731223:1:exon
so has part: feature:2734297-2734487:1:exon
so has part: feature:2741322-2741798:1:exon

XP_023826303.1
type: Protein
SIO_000068: ncbiprotein

position:2724715:1
position: 2724715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2724715-2724806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2729704-2729836:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2730224-2730402:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2730638-2730711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2730863-2731025:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2731138-2731223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2734297-2734487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2741322-2741798:1:exon

LOC111952016
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111952016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2744785..2746443)
location: region:2744785-2746443:-1
so has part: feature:2744785-2746443:-1:exon
subclass of: SO_0000011

111952016
type: Gene
SIO_000068: ncbigene

position:2744785:-1
position: 2744785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746443:-1
position: 2746443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2744785-2746443:-1:exon

LOC111952016
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111952016
product: uncharacterized LOC111952016, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002875670.1
SIO_010081: LOC111952016
subclass of: SO_0000673
so part of: LOC111952016
location: complement(join(2744785..2745086,2745244..2745387,2746011..2746097,2746291..2746443))
location: region:2744785-2746443:-1
so has part: feature:2746291-2746443:-1:exon
so has part: feature:2746011-2746097:-1:exon
so has part: feature:2745244-2745387:-1:exon
so has part: feature:2744785-2745086:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2746291-2746443:-1:exon

position:2746291:-1
position: 2746291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2746011-2746097:-1:exon

position:2746011:-1
position: 2746011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746097:-1
position: 2746097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2745244-2745387:-1:exon

position:2745244:-1
position: 2745244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2745387:-1
position: 2745387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2744785-2745086:-1:exon

position:2745086:-1
position: 2745086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111952016
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111952016
product: uncharacterized LOC111952016, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_002875668.1
SIO_010081: LOC111952016
subclass of: SO_0000673
so part of: LOC111952016
location: complement(join(2744787..2745086,2745244..2745387,2746011..2746282))
location: region:2744787-2746282:-1
so has part: feature:2746011-2746282:-1:exon
so has part: feature:2745244-2745387:-1:exon
so has part: feature:2744787-2745086:-1:exon

position:2744787:-1
position: 2744787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746282:-1
position: 2746282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746011-2746282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2745244-2745387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2744787-2745086:-1:exon

LOC111952016
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111952016
product: uncharacterized LOC111952016, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XR_002875669.1
SIO_010081: LOC111952016
subclass of: SO_0000673
so part of: LOC111952016
location: complement(join(2744788..2745086,2745244..2745387,2746291..2746440))
location: region:2744788-2746440:-1
so has part: feature:2746291-2746440:-1:exon
so has part: feature:2745244-2745387:-1:exon
so has part: feature:2744788-2745086:-1:exon

position:2744788:-1
position: 2744788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746440:-1
position: 2746440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746291-2746440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2745244-2745387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2744788-2745086:-1:exon

LOC111952079
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111952079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2747220..2767950
location: region:2747220-2767950:1
so has part: feature:2747220-2767950:1:exon
subclass of: SO_0000010

111952079
type: Gene
SIO_000068: ncbigene

position:2747220:1
position: 2747220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767950:1
position: 2767950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2747220-2767950:1:exon

LOC111952079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952079
product: rho GTPase-activating protein 22, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023970560.2
SIO_010081: LOC111952079
subclass of: SO_0000673
so part of: LOC111952079
location: join(2747220..2747591,2747904..2748001,2756713..2756891,2757215..2757302,2762538..2762663,2762980..2763196,2763583..2763715,2763913..2763986,2764868..2764989,2765894..2767076,2767225..2767950)
location: region:2747220-2767950:1
so has part: feature:2747220-2747591:1:exon
so has part: feature:2747904-2748001:1:exon
so has part: feature:2756713-2756891:1:exon
so has part: feature:2757215-2757302:1:exon
so has part: feature:2762538-2762663:1:exon
so has part: feature:2762980-2763196:1:exon
so has part: feature:2763583-2763715:1:exon
so has part: feature:2763913-2763986:1:exon
so has part: feature:2764868-2764989:1:exon
so has part: feature:2765894-2767076:1:exon
so has part: feature:2767225-2767950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2747220-2747591:1:exon

position:2747591:1
position: 2747591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2747904-2748001:1:exon

position:2747904:1
position: 2747904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2748001:1
position: 2748001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2756713-2756891:1:exon

position:2756713:1
position: 2756713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2756891:1
position: 2756891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2757215-2757302:1:exon

position:2757215:1
position: 2757215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757302:1
position: 2757302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2762538-2762663:1:exon

position:2762538:1
position: 2762538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2762663:1
position: 2762663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2762980-2763196:1:exon

position:2762980:1
position: 2762980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763196:1
position: 2763196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2763583-2763715:1:exon

position:2763583:1
position: 2763583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763715:1
position: 2763715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2763913-2763986:1:exon

position:2763913:1
position: 2763913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763986:1
position: 2763986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2764868-2764989:1:exon

position:2764868:1
position: 2764868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2764989:1
position: 2764989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2765894-2767076:1:exon

position:2765894:1
position: 2765894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767076:1
position: 2767076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2767225-2767950:1:exon

position:2767225:1
position: 2767225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111952079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952079
product: rho GTPase-activating protein 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023970559.2
SIO_010081: LOC111952079
subclass of: SO_0000673
so part of: LOC111952079
location: join(2747607..2747787,2747904..2748001,2756713..2756891,2757215..2757302,2762538..2762663,2762980..2763196,2763583..2763715,2763913..2763986,2764868..2764989,2765894..2767076,2767225..2767950)
location: region:2747607-2767950:1
so has part: feature:2747607-2747787:1:exon
so has part: feature:2747904-2748001:1:exon
so has part: feature:2756713-2756891:1:exon
so has part: feature:2757215-2757302:1:exon
so has part: feature:2762538-2762663:1:exon
so has part: feature:2762980-2763196:1:exon
so has part: feature:2763583-2763715:1:exon
so has part: feature:2763913-2763986:1:exon
so has part: feature:2764868-2764989:1:exon
so has part: feature:2765894-2767076:1:exon
so has part: feature:2767225-2767950:1:exon

position:2747607:1
position: 2747607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2747607-2747787:1:exon

position:2747787:1
position: 2747787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2747904-2748001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2756713-2756891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757215-2757302:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2762538-2762663:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2762980-2763196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2763583-2763715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2763913-2763986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2764868-2764989:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2765894-2767076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2767225-2767950:1:exon

LOC111952079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 22 isoform X2
translation: MDRQRRGSARSKSMVLGRCSSPLGQEMTLKAGWLKRQRSIMRNWQLRWFVLHTEALYFYKDQDETKPQGCIILQGSQVSELSANQDEAGRHLFEIGPGGSGEKDRSGLSESFLLMANSQRDMEEWVRAIRRAIWAPLGGGIFGQHLEETMQCESGCGSSSKPLVPLLVQQCVCFIHQHGLTEEGLFRMPGQTNHVRELQDAFNCGEKPLFGSNTDVHTVASLLKLYLRELPEPVVPFNKYTEFLSTAQLLAKDQEEGILELGRQLKSLPQVNYNLLSYICRFLDEVQSHSSQNKMSVQNLATVFGPNIFRPKMEDPQIMMEGSSQVQHLMTVLISEHSRLYQGQAETPRQDQSAPPSTPCPRIPSIQRCSVEWNSQEDIPPPNPAKDYPSLGQTPTTPSQEPLQPLPTSTVSSLDTDHPGSTPKERTEGDSEGMNGGRTEEKTERKSEGKSQIKVSGGSGADLGPSKQSKSQSSWRSSLKGRSGSGGVRGKLGGSAVDVSTVTGGHWLMNGLTSFRSHRRTASTGERLKESSLCLKETHIDSPLDSYTESSLLLKDSSHSQRSTLKDSAPLHIDSSCSTIVSSYPKIKPSLSVRNSPHSNRLSTYDNVIVTPCSLSLPIGSPSPWTSCEIPLAESTGIEHDTLISGLGSGQAVAGSSMAGGSSSPLELCVSSAEGDSGDDITGQRSGVNEGLFSLETELKEELRRQRISYETRIHKLEDSCSGLRLQSGRLEEDLGQEKKKLFMMEIRLGNSERARQDAESRNVLLQKEMEELFATLGNLTTGTDTS
SIO_010081: LOC111952079
subclass of: SO_0000673
so part of: LOC111952079
location: join(2747977..2748001,2756713..2756891,2757215..2757302,2762538..2762663,2762980..2763196,2763583..2763715,2763913..2763986,2764868..2764989,2765894..2767076,2767225..2767441)
location: region:2747977-2767441:1
so has part: feature:2747977-2748001:1:exon
so has part: feature:2756713-2756891:1:exon
so has part: feature:2757215-2757302:1:exon
so has part: feature:2762538-2762663:1:exon
so has part: feature:2762980-2763196:1:exon
so has part: feature:2763583-2763715:1:exon
so has part: feature:2763913-2763986:1:exon
so has part: feature:2764868-2764989:1:exon
so has part: feature:2765894-2767076:1:exon
so has part: feature:2767225-2767441:1:exon

XP_023826327.1
type: Protein
SIO_000068: ncbiprotein

position:2747977:1
position: 2747977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767441:1
position: 2767441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2747977-2748001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2756713-2756891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757215-2757302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2762538-2762663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2762980-2763196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763583-2763715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2763913-2763986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2764868-2764989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2765894-2767076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2767225-2767441:1:exon

LOC111952079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 22 isoform X2
translation: MDRQRRGSARSKSMVLGRCSSPLGQEMTLKAGWLKRQRSIMRNWQLRWFVLHTEALYFYKDQDETKPQGCIILQGSQVSELSANQDEAGRHLFEIGPGGSGEKDRSGLSESFLLMANSQRDMEEWVRAIRRAIWAPLGGGIFGQHLEETMQCESGCGSSSKPLVPLLVQQCVCFIHQHGLTEEGLFRMPGQTNHVRELQDAFNCGEKPLFGSNTDVHTVASLLKLYLRELPEPVVPFNKYTEFLSTAQLLAKDQEEGILELGRQLKSLPQVNYNLLSYICRFLDEVQSHSSQNKMSVQNLATVFGPNIFRPKMEDPQIMMEGSSQVQHLMTVLISEHSRLYQGQAETPRQDQSAPPSTPCPRIPSIQRCSVEWNSQEDIPPPNPAKDYPSLGQTPTTPSQEPLQPLPTSTVSSLDTDHPGSTPKERTEGDSEGMNGGRTEEKTERKSEGKSQIKVSGGSGADLGPSKQSKSQSSWRSSLKGRSGSGGVRGKLGGSAVDVSTVTGGHWLMNGLTSFRSHRRTASTGERLKESSLCLKETHIDSPLDSYTESSLLLKDSSHSQRSTLKDSAPLHIDSSCSTIVSSYPKIKPSLSVRNSPHSNRLSTYDNVIVTPCSLSLPIGSPSPWTSCEIPLAESTGIEHDTLISGLGSGQAVAGSSMAGGSSSPLELCVSSAEGDSGDDITGQRSGVNEGLFSLETELKEELRRQRISYETRIHKLEDSCSGLRLQSGRLEEDLGQEKKKLFMMEIRLGNSERARQDAESRNVLLQKEMEELFATLGNLTTGTDTS
SIO_010081: LOC111952079
subclass of: SO_0000673
so part of: LOC111952079
location: join(2747977..2748001,2756713..2756891,2757215..2757302,2762538..2762663,2762980..2763196,2763583..2763715,2763913..2763986,2764868..2764989,2765894..2767076,2767225..2767441)
location: region:2747977-2767441:1
so has part: feature:2747977-2748001:1:exon
so has part: feature:2756713-2756891:1:exon
so has part: feature:2757215-2757302:1:exon
so has part: feature:2762538-2762663:1:exon
so has part: feature:2762980-2763196:1:exon
so has part: feature:2763583-2763715:1:exon
so has part: feature:2763913-2763986:1:exon
so has part: feature:2764868-2764989:1:exon
so has part: feature:2765894-2767076:1:exon
so has part: feature:2767225-2767441:1:exon

XP_023826328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2747977-2748001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2756713-2756891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757215-2757302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2762538-2762663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2762980-2763196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763583-2763715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2763913-2763986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2764868-2764989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2765894-2767076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2767225-2767441:1:exon

LOC111952079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952079
product: rho GTPase-activating protein 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_023970558.2
SIO_010081: LOC111952079
subclass of: SO_0000673
so part of: LOC111952079
location: join(2749998..2750200,2756713..2756891,2757215..2757302,2762538..2762663,2762980..2763196,2763583..2763715,2763913..2763986,2764868..2764989,2765894..2767076,2767225..2767950)
location: region:2749998-2767950:1
so has part: feature:2749998-2750200:1:exon
so has part: feature:2756713-2756891:1:exon
so has part: feature:2757215-2757302:1:exon
so has part: feature:2762538-2762663:1:exon
so has part: feature:2762980-2763196:1:exon
so has part: feature:2763583-2763715:1:exon
so has part: feature:2763913-2763986:1:exon
so has part: feature:2764868-2764989:1:exon
so has part: feature:2765894-2767076:1:exon
so has part: feature:2767225-2767950:1:exon

position:2749998:1
position: 2749998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2749998-2750200:1:exon

position:2750200:1
position: 2750200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2756713-2756891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757215-2757302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2762538-2762663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2762980-2763196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763583-2763715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2763913-2763986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2764868-2764989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2765894-2767076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2767225-2767950:1:exon

LOC111952079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952079
product: rho GTPase-activating protein 22, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023970561.1
SIO_010081: LOC111952079
subclass of: SO_0000673
so part of: LOC111952079
location: join(2749998..2750200,2756713..2756891,2757215..2757302,2762538..2762663,2762980..2763196,2763583..2763715,2763913..2763986,2764868..2764989,2765956..2766273)
location: region:2749998-2766273:1
so has part: feature:2749998-2750200:1:exon
so has part: feature:2756713-2756891:1:exon
so has part: feature:2757215-2757302:1:exon
so has part: feature:2762538-2762663:1:exon
so has part: feature:2762980-2763196:1:exon
so has part: feature:2763583-2763715:1:exon
so has part: feature:2763913-2763986:1:exon
so has part: feature:2764868-2764989:1:exon
so has part: feature:2765956-2766273:1:exon

position:2766273:1
position: 2766273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2749998-2750200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2756713-2756891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757215-2757302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2762538-2762663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2762980-2763196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763583-2763715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2763913-2763986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2764868-2764989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2765956-2766273:1:exon

position:2765956:1
position: 2765956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111952079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 22 isoform X1
translation: MTTMLSPKNRQTRRARSKSMVLGRCSSPLGQEMTLKAGWLKRQRSIMRNWQLRWFVLHTEALYFYKDQDETKPQGCIILQGSQVSELSANQDEAGRHLFEIGPGGSGEKDRSGLSESFLLMANSQRDMEEWVRAIRRAIWAPLGGGIFGQHLEETMQCESGCGSSSKPLVPLLVQQCVCFIHQHGLTEEGLFRMPGQTNHVRELQDAFNCGEKPLFGSNTDVHTVASLLKLYLRELPEPVVPFNKYTEFLSTAQLLAKDQEEGILELGRQLKSLPQVNYNLLSYICRFLDEVQSHSSQNKMSVQNLATVFGPNIFRPKMEDPQIMMEGSSQVQHLMTVLISEHSRLYQGQAETPRQDQSAPPSTPCPRIPSIQRCSVEWNSQEDIPPPNPAKDYPSLGQTPTTPSQEPLQPLPTSTVSSLDTDHPGSTPKERTEGDSEGMNGGRTEEKTERKSEGKSQIKVSGGSGADLGPSKQSKSQSSWRSSLKGRSGSGGVRGKLGGSAVDVSTVTGGHWLMNGLTSFRSHRRTASTGERLKESSLCLKETHIDSPLDSYTESSLLLKDSSHSQRSTLKDSAPLHIDSSCSTIVSSYPKIKPSLSVRNSPHSNRLSTYDNVIVTPCSLSLPIGSPSPWTSCEIPLAESTGIEHDTLISGLGSGQAVAGSSMAGGSSSPLELCVSSAEGDSGDDITGQRSGVNEGLFSLETELKEELRRQRISYETRIHKLEDSCSGLRLQSGRLEEDLGQEKKKLFMMEIRLGNSERARQDAESRNVLLQKEMEELFATLGNLTTGTDTS
SIO_010081: LOC111952079
subclass of: SO_0000673
so part of: LOC111952079
location: join(2750158..2750200,2756713..2756891,2757215..2757302,2762538..2762663,2762980..2763196,2763583..2763715,2763913..2763986,2764868..2764989,2765894..2767076,2767225..2767441)
location: region:2750158-2767441:1
so has part: feature:2750158-2750200:1:exon
so has part: feature:2756713-2756891:1:exon
so has part: feature:2757215-2757302:1:exon
so has part: feature:2762538-2762663:1:exon
so has part: feature:2762980-2763196:1:exon
so has part: feature:2763583-2763715:1:exon
so has part: feature:2763913-2763986:1:exon
so has part: feature:2764868-2764989:1:exon
so has part: feature:2765894-2767076:1:exon
so has part: feature:2767225-2767441:1:exon

XP_023826326.1
type: Protein
SIO_000068: ncbiprotein

position:2750158:1
position: 2750158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2750158-2750200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2756713-2756891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757215-2757302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2762538-2762663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2762980-2763196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763583-2763715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2763913-2763986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2764868-2764989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2765894-2767076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2767225-2767441:1:exon

LOC111952079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 22 isoform X3
translation: MTTMLSPKNRQTRRARSKSMVLGRCSSPLGQEMTLKAGWLKRQRSIMRNWQLRWFVLHTEALYFYKDQDETKPQGCIILQGSQVSELSANQDEAGRHLFEIGPGGSGEKDRSGLSESFLLMANSQRDMEEWVRAIRRAIWAPLGGGIFGQHLEETMQCESGCGSSSKPLVPLLVQQCVCFIHQHGLTEEGLFRMPGQTNHVRELQDAFNCGEKPLFGSNTDVHTVASLLKLYLRELPEPVVPFNKYTEFLSTAQLLAKDQEEGILELGRQLKSLPQVNYNLLSYICRFLDEVQSHSSQNKMSVQNLATVFGPNIFRPKMEDPQIMMEGAGRDSQAGPICPSFNSLSPDPLDSALQCGMELTGGHPAPQPRQGLSIPGTDPYHPKSGTTSTPPDLHSVLS
SIO_010081: LOC111952079
subclass of: SO_0000673
so part of: LOC111952079
location: join(2750158..2750200,2756713..2756891,2757215..2757302,2762538..2762663,2762980..2763196,2763583..2763715,2763913..2763986,2764868..2764989,2765956..2766173)
location: region:2750158-2766173:1
so has part: feature:2750158-2750200:1:exon
so has part: feature:2756713-2756891:1:exon
so has part: feature:2757215-2757302:1:exon
so has part: feature:2762538-2762663:1:exon
so has part: feature:2762980-2763196:1:exon
so has part: feature:2763583-2763715:1:exon
so has part: feature:2763913-2763986:1:exon
so has part: feature:2764868-2764989:1:exon
so has part: feature:2765956-2766173:1:exon

XP_023826329.1
type: Protein
SIO_000068: ncbiprotein

position:2766173:1
position: 2766173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2750158-2750200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2756713-2756891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757215-2757302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2762538-2762663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2762980-2763196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763583-2763715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2763913-2763986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2764868-2764989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2765956-2766173:1:exon

LOC111951896
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2792400..2811144)
location: region:2792400-2811144:-1
so has part: feature:2792400-2811144:-1:exon
subclass of: SO_0000010

111951896
type: Gene
SIO_000068: ncbigene

position:2792400:-1
position: 2792400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2811144:-1
position: 2811144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2792400-2811144:-1:exon

LOC111951896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951896
product: mitogen-activated protein kinase 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_023970214.1
SIO_010081: LOC111951896
subclass of: SO_0000673
so part of: LOC111951896
location: complement(join(2792400..2792750,2793088..2793168,2793643..2793706,2793884..2794008,2794093..2794275,2794569..2794640,2795293..2795458,2798820..2798958,2799252..2799310,2799702..2799831,2802020..2802198,2810953..2811143))
location: region:2792400-2811143:-1
so has part: feature:2810953-2811143:-1:exon
so has part: feature:2802020-2802198:-1:exon
so has part: feature:2799702-2799831:-1:exon
so has part: feature:2799252-2799310:-1:exon
so has part: feature:2798820-2798958:-1:exon
so has part: feature:2795293-2795458:-1:exon
so has part: feature:2794569-2794640:-1:exon
so has part: feature:2794093-2794275:-1:exon
so has part: feature:2793884-2794008:-1:exon
so has part: feature:2793643-2793706:-1:exon
so has part: feature:2793088-2793168:-1:exon
so has part: feature:2792400-2792750:-1:exon

position:2811143:-1
position: 2811143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810953-2811143:-1:exon

position:2810953:-1
position: 2810953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2802020-2802198:-1:exon

position:2802020:-1
position: 2802020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2802198:-1
position: 2802198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2799702-2799831:-1:exon

position:2799702:-1
position: 2799702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2799831:-1
position: 2799831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2799252-2799310:-1:exon

position:2799252:-1
position: 2799252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2799310:-1
position: 2799310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2798820-2798958:-1:exon

position:2798820:-1
position: 2798820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2798958:-1
position: 2798958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2795293-2795458:-1:exon

position:2795293:-1
position: 2795293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2795458:-1
position: 2795458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2794569-2794640:-1:exon

position:2794569:-1
position: 2794569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2794640:-1
position: 2794640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2794093-2794275:-1:exon

position:2794093:-1
position: 2794093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2794275:-1
position: 2794275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2793884-2794008:-1:exon

position:2793884:-1
position: 2793884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2794008:-1
position: 2794008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2793643-2793706:-1:exon

position:2793643:-1
position: 2793643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2793706:-1
position: 2793706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2793088-2793168:-1:exon

position:2793088:-1
position: 2793088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2793168:-1
position: 2793168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2792400-2792750:-1:exon

position:2792750:-1
position: 2792750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951896
product: mitogen-activated protein kinase 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_023970213.1
SIO_010081: LOC111951896
subclass of: SO_0000673
so part of: LOC111951896
location: complement(join(2792400..2792750,2793088..2793168,2793643..2793706,2793884..2794008,2794093..2794275,2795055..2795126,2795293..2795458,2798820..2798958,2799252..2799310,2799702..2799831,2802020..2802198,2810953..2811143))
location: region:2792400-2811143:-1
so has part: feature:2810953-2811143:-1:exon
so has part: feature:2802020-2802198:-1:exon
so has part: feature:2799702-2799831:-1:exon
so has part: feature:2799252-2799310:-1:exon
so has part: feature:2798820-2798958:-1:exon
so has part: feature:2795293-2795458:-1:exon
so has part: feature:2795055-2795126:-1:exon
so has part: feature:2794093-2794275:-1:exon
so has part: feature:2793884-2794008:-1:exon
so has part: feature:2793643-2793706:-1:exon
so has part: feature:2793088-2793168:-1:exon
so has part: feature:2792400-2792750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2810953-2811143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2802020-2802198:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799702-2799831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2799252-2799310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2798820-2798958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2795293-2795458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795055-2795126:-1:exon

position:2795055:-1
position: 2795055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2795126:-1
position: 2795126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2794093-2794275:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2793884-2794008:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2793643-2793706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2793088-2793168:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2792400-2792750:-1:exon

LOC111951896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 8 isoform X2
translation: MNKNKRGEEREFYSLDVGDSTFKVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFSPQKSLEEFADVYIVMELMDANLCQVIQMELDHERLSYLLYQMLCGIKHLHNAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAATGLLMTPYVVTRYYRAPEVILGMGYQANVDVWSVGCIVAEMVRGSVLFPGTDHIDQWNKVIEQLGTPPQDFLMKLNQSVRTYVENRPRYAGYSFDKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDSSKRISVDEALKHPYINVWYDPAEVEAPPPKITDKQLDEREHTVEEWKDLIWKEVYEWDEWTKQNGVIRGQPPPLGAAVIDSSPQHPSSSPSANDVSSMSTDPSDPSEPTMTSDTDSSLDSHTSLGALACCR
SIO_010081: LOC111951896
subclass of: SO_0000673
so part of: LOC111951896
location: complement(join(2792578..2792750,2793088..2793168,2793643..2793706,2793884..2794008,2794093..2794275,2794569..2794640,2795293..2795458,2798820..2798958,2799252..2799310,2799702..2799831,2802020..2802147))
location: region:2792578-2802147:-1
so has part: feature:2802020-2802147:-1:exon
so has part: feature:2799702-2799831:-1:exon
so has part: feature:2799252-2799310:-1:exon
so has part: feature:2798820-2798958:-1:exon
so has part: feature:2795293-2795458:-1:exon
so has part: feature:2794569-2794640:-1:exon
so has part: feature:2794093-2794275:-1:exon
so has part: feature:2793884-2794008:-1:exon
so has part: feature:2793643-2793706:-1:exon
so has part: feature:2793088-2793168:-1:exon
so has part: feature:2792578-2792750:-1:exon

XP_023825982.1
type: Protein
SIO_000068: ncbiprotein

position:2792578:-1
position: 2792578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2802147:-1
position: 2802147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2802020-2802147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2799702-2799831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799252-2799310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2798820-2798958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2795293-2795458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2794569-2794640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2794093-2794275:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2793884-2794008:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2793643-2793706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2793088-2793168:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2792578-2792750:-1:exon

LOC111951896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 8 isoform X1
translation: MNKNKRGEEREFYSLDVGDSTFKVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFSPQKSLEEFADVYIVMELMDANLCQVIQMELDHERLSYLLYQMLCGIKHLHNAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAATGLLMTPYVVTRYYRAPEVILGMGYQANVDIWSVGCILAEMVRHKILFPGRDYIDQWNKVIEQLGTPPQDFLMKLNQSVRTYVENRPRYAGYSFDKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDSSKRISVDEALKHPYINVWYDPAEVEAPPPKITDKQLDEREHTVEEWKDLIWKEVYEWDEWTKQNGVIRGQPPPLGAAVIDSSPQHPSSSPSANDVSSMSTDPSDPSEPTMTSDTDSSLDSHTSLGALACCR
SIO_010081: LOC111951896
subclass of: SO_0000673
so part of: LOC111951896
location: complement(join(2792578..2792750,2793088..2793168,2793643..2793706,2793884..2794008,2794093..2794275,2795055..2795126,2795293..2795458,2798820..2798958,2799252..2799310,2799702..2799831,2802020..2802147))
location: region:2792578-2802147:-1
so has part: feature:2802020-2802147:-1:exon
so has part: feature:2799702-2799831:-1:exon
so has part: feature:2799252-2799310:-1:exon
so has part: feature:2798820-2798958:-1:exon
so has part: feature:2795293-2795458:-1:exon
so has part: feature:2795055-2795126:-1:exon
so has part: feature:2794093-2794275:-1:exon
so has part: feature:2793884-2794008:-1:exon
so has part: feature:2793643-2793706:-1:exon
so has part: feature:2793088-2793168:-1:exon
so has part: feature:2792578-2792750:-1:exon

XP_023825981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2802020-2802147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2799702-2799831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799252-2799310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2798820-2798958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2795293-2795458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2795055-2795126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2794093-2794275:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2793884-2794008:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2793643-2793706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2793088-2793168:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2792578-2792750:-1:exon

LOC111951896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951896
product: mitogen-activated protein kinase 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023970215.1
SIO_010081: LOC111951896
subclass of: SO_0000673
so part of: LOC111951896
location: complement(join(2792641..2792755,2793088..2793168,2793643..2793706,2793884..2794008,2794093..2794275,2795055..2795126,2795293..2795458,2798820..2798958,2799252..2799310,2799702..2799831,2802020..2802198,2810953..2811143))
location: region:2792641-2811143:-1
so has part: feature:2810953-2811143:-1:exon
so has part: feature:2802020-2802198:-1:exon
so has part: feature:2799702-2799831:-1:exon
so has part: feature:2799252-2799310:-1:exon
so has part: feature:2798820-2798958:-1:exon
so has part: feature:2795293-2795458:-1:exon
so has part: feature:2795055-2795126:-1:exon
so has part: feature:2794093-2794275:-1:exon
so has part: feature:2793884-2794008:-1:exon
so has part: feature:2793643-2793706:-1:exon
so has part: feature:2793088-2793168:-1:exon
so has part: feature:2792641-2792755:-1:exon

position:2792641:-1
position: 2792641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810953-2811143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2802020-2802198:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799702-2799831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2799252-2799310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2798820-2798958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2795293-2795458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795055-2795126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2794093-2794275:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2793884-2794008:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2793643-2793706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2793088-2793168:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2792641-2792755:-1:exon

position:2792755:-1
position: 2792755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 8 isoform X3
translation: MNKNKRGEEREFYSLDVGDSTFKVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFSPQKSLEEFADVYIVMELMDANLCQVIQMELDHERLSYLLYQMLCGIKHLHNAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAATGLLMTPYVVTRYYRAPEVILGMGYQANVDIWSVGCILAEMVRHKILFPGRDYIDQWNKVIEQLGTPPQDFLMKLNQSVRTYVENRPRYAGYSFDKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDSSKRISVDEALKHPYINVWYDPAEVEAPPPKITDKQLDEREHTVEEWKDLIWKEVYEWDEWTKQNGVIRGQPPPLAQVQQ
SIO_010081: LOC111951896
subclass of: SO_0000673
so part of: LOC111951896
location: complement(join(2792739..2792755,2793088..2793168,2793643..2793706,2793884..2794008,2794093..2794275,2795055..2795126,2795293..2795458,2798820..2798958,2799252..2799310,2799702..2799831,2802020..2802147))
location: region:2792739-2802147:-1
so has part: feature:2802020-2802147:-1:exon
so has part: feature:2799702-2799831:-1:exon
so has part: feature:2799252-2799310:-1:exon
so has part: feature:2798820-2798958:-1:exon
so has part: feature:2795293-2795458:-1:exon
so has part: feature:2795055-2795126:-1:exon
so has part: feature:2794093-2794275:-1:exon
so has part: feature:2793884-2794008:-1:exon
so has part: feature:2793643-2793706:-1:exon
so has part: feature:2793088-2793168:-1:exon
so has part: feature:2792739-2792755:-1:exon

XP_023825983.1
type: Protein
SIO_000068: ncbiprotein

position:2792739:-1
position: 2792739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2802020-2802147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2799702-2799831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799252-2799310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2798820-2798958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2795293-2795458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2795055-2795126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2794093-2794275:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2793884-2794008:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2793643-2793706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2793088-2793168:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2792739-2792755:-1:exon

LOC111951896
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8036
gene: LOC111951896
product: mitogen-activated protein kinase 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XR_002875655.1
SIO_010081: LOC111951896
so part of: LOC111951896
location: complement(join(2794248..2794275,2794569..2795126,2795293..2795458,2798820..2798958,2799252..2799310,2799702..2799831,2802020..2802198,2810953..2811144))
location: region:2794248-2811144:-1
so has part: feature:2810953-2811144:-1:exon
so has part: feature:2802020-2802198:-1:exon
so has part: feature:2799702-2799831:-1:exon
so has part: feature:2799252-2799310:-1:exon
so has part: feature:2798820-2798958:-1:exon
so has part: feature:2795293-2795458:-1:exon
so has part: feature:2794569-2795126:-1:exon
so has part: feature:2794248-2794275:-1:exon

position:2794248:-1
position: 2794248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810953-2811144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2802020-2802198:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799702-2799831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2799252-2799310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2798820-2798958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2795293-2795458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2794569-2795126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2794248-2794275:-1:exon

LOC111951896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951896
product: mitogen-activated protein kinase 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_023970216.1
SIO_010081: LOC111951896
subclass of: SO_0000673
so part of: LOC111951896
location: complement(join(2794569..2794640,2795017..2795126,2795293..2795458,2798820..2798958,2799252..2799310,2799702..2799831,2802020..2802198,2810953..2811144))
location: region:2794569-2811144:-1
so has part: feature:2810953-2811144:-1:exon
so has part: feature:2802020-2802198:-1:exon
so has part: feature:2799702-2799831:-1:exon
so has part: feature:2799252-2799310:-1:exon
so has part: feature:2798820-2798958:-1:exon
so has part: feature:2795293-2795458:-1:exon
so has part: feature:2795017-2795126:-1:exon
so has part: feature:2794569-2794640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2810953-2811144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2802020-2802198:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799702-2799831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2799252-2799310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2798820-2798958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2795293-2795458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795017-2795126:-1:exon

position:2795017:-1
position: 2795017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2794569-2794640:-1:exon

LOC111951896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 8B isoform X4
translation: MNKNKRGEEREFYSLDVGDSTFKVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFSPQKSLEEFADVYIVMELMDANLCQVIQMELDHERLSYLLYQMLCGIKHLHNAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAATGLLMTPYVVTRYYRAPEVILGMGYQANVDIWSVGCILAEMVRHKILFPGRDCILSASGCESSP
SIO_010081: LOC111951896
subclass of: SO_0000673
so part of: LOC111951896
location: complement(join(2795017..2795126,2795293..2795458,2798820..2798958,2799252..2799310,2799702..2799831,2802020..2802147))
location: region:2795017-2802147:-1
so has part: feature:2802020-2802147:-1:exon
so has part: feature:2799702-2799831:-1:exon
so has part: feature:2799252-2799310:-1:exon
so has part: feature:2798820-2798958:-1:exon
so has part: feature:2795293-2795458:-1:exon
so has part: feature:2795017-2795126:-1:exon

XP_023825984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2802020-2802147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2799702-2799831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2799252-2799310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2798820-2798958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2795293-2795458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2795017-2795126:-1:exon

LOC111951895
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2847450..2883386)
location: region:2847450-2883386:-1
so has part: feature:2847450-2883386:-1:exon
subclass of: SO_0000010

111951895
type: Gene
SIO_000068: ncbigene

position:2847450:-1
position: 2847450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2883386:-1
position: 2883386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2847450-2883386:-1:exon

LOC111951895
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951895
product: prominin-1-A
inference: similar to RNA sequence (same species):INSD:GEKT01038258.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 595 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023970211.1
SIO_010081: LOC111951895
subclass of: SO_0000673
so part of: LOC111951895
location: complement(join(2847450..2848564,2848840..2848952,2849094..2849183,2849424..2849492,2849943..2850023,2850150..2850203,2850401..2850487,2850598..>2850666,<2856087..2856243,2857203..2857266,2864112..2864186,2865808..2866004,2866219..2866308,2866485..2866548,2867819..2867939,2868047..2868252,2868652..2868719,2874536..2874811,2883087..2883386))
location: region:2847450-2883386:-1
so has part: feature:2883087-2883386:-1:exon
so has part: feature:2874536-2874811:-1:exon
so has part: feature:2868652-2868719:-1:exon
so has part: feature:2868047-2868252:-1:exon
so has part: feature:2867819-2867939:-1:exon
so has part: feature:2866485-2866548:-1:exon
so has part: feature:2866219-2866308:-1:exon
so has part: feature:2865808-2866004:-1:exon
so has part: feature:2864112-2864186:-1:exon
so has part: feature:2857203-2857266:-1:exon
so has part: feature:2856087-2856243:-1:exon
so has part: feature:2850598-2850666:-1:exon
so has part: feature:2850401-2850487:-1:exon
so has part: feature:2850150-2850203:-1:exon
so has part: feature:2849943-2850023:-1:exon
so has part: feature:2849424-2849492:-1:exon
so has part: feature:2849094-2849183:-1:exon
so has part: feature:2848840-2848952:-1:exon
so has part: feature:2847450-2848564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2883087-2883386:-1:exon

position:2883087:-1
position: 2883087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2874536-2874811:-1:exon

position:2874536:-1
position: 2874536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2874811:-1
position: 2874811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2868652-2868719:-1:exon

position:2868652:-1
position: 2868652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2868719:-1
position: 2868719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2868047-2868252:-1:exon

position:2868047:-1
position: 2868047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2868252:-1
position: 2868252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2867819-2867939:-1:exon

position:2867819:-1
position: 2867819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2867939:-1
position: 2867939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2866485-2866548:-1:exon

position:2866485:-1
position: 2866485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866548:-1
position: 2866548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2866219-2866308:-1:exon

position:2866219:-1
position: 2866219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866308:-1
position: 2866308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2865808-2866004:-1:exon

position:2865808:-1
position: 2865808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866004:-1
position: 2866004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2864112-2864186:-1:exon

position:2864112:-1
position: 2864112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2864186:-1
position: 2864186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2857203-2857266:-1:exon

position:2857203:-1
position: 2857203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2857266:-1
position: 2857266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2856087-2856243:-1:exon

position:2856087:-1
position: 2856087
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2856243:-1
position: 2856243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2850598-2850666:-1:exon

position:2850598:-1
position: 2850598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2850666:-1
position: 2850666
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2850401-2850487:-1:exon

position:2850401:-1
position: 2850401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2850487:-1
position: 2850487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2850150-2850203:-1:exon

position:2850150:-1
position: 2850150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2850203:-1
position: 2850203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2849943-2850023:-1:exon

position:2849943:-1
position: 2849943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2850023:-1
position: 2850023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2849424-2849492:-1:exon

position:2849424:-1
position: 2849424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2849492:-1
position: 2849492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2849094-2849183:-1:exon

position:2849094:-1
position: 2849094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2849183:-1
position: 2849183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2848840-2848952:-1:exon

position:2848840:-1
position: 2848840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2848952:-1
position: 2848952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2847450-2848564:-1:exon

position:2848564:-1
position: 2848564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951895
inference: similar to RNA sequence (same species):INSD:GEKT01038258.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 595 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prominin-1-A
translation: MGAYRRVWRLGGCVGAVLAWIGALFLGSSLAQPPADSCPTGVTPSNLSQPQYQSVPGADTGFMSGVVQSFLHTVQPNPFPKDLLLNLLEGNGMYVYNDDKTIKEVLLYEVGFLVCAAIGIVYIILMPLVGFCLACCRCCGHCGGHMYQKQTKAVHCHRRGFYWATLLTTLVILSGNICMFFSNQVLNGSVEDSSVELNNTLDNLQTYLTAVPQQIDSVLMESNETVDEVTRSLNNIGNLLGKEIQRRLEGPLKPSLQSVRDIANVVNSTSVLLVRLDSTLTQFQSDVSVVQANVSSVRDRINSTLRNPNCTACSTHQSELQKLTFATTIAVPSLRELQSAVNNVTKADLNSKVKEGEDFFASIPQKVTNDTKDVVQNVKQQLZGIERQISEVKGNIPVSALRNISDTLGEAQRYIGMYSQQSERVEMTRWGVCIILSCLVLLVVVCNLLGLFLGPVGLSPKDEPTERSSTADCGGTFLMAGAGLSFLFSWLFMLVVLVLFILGGNVYTLICQPWRSGQLLQFADTPGLIHGFNLGKTLGLKSNLTLTEVYNDCEKNRPLWTTLHLYDLIDLNALLNVSKYTEEIQQHFNSSEIKLSTITLLTHEIRKQLHSFSDKALDVDFSSVTQQINNISSINLDETADRLDQLASVQTGVKLELTQEATDLRAIQFYVNTAVIPQLTRLNSTIDALGVVASHINRTVGDLLSKVGTAQDFLDTNTSQIVKAESRAFLDCQMGYFTAYADWANFTITQQVGLCGPVAEAMDSAEVIVCSNMVQSLNAFWFSLGWCTIFLVPSIIFSINLAKFYRRMKHSDIYDNHIAMNIIPRAQIQPY
SIO_010081: LOC111951895
subclass of: SO_0000673
so part of: LOC111951895
location: complement(join(2848513..2848564,2848840..2848952,2849094..2849183,2849424..2849492,2849943..2850023,2850150..2850203,2850401..2850487,2850598..>2850666,<2856087..2856243,2857203..2857266,2864112..2864186,2865808..2866004,2866219..2866308,2866485..2866548,2867819..2867939,2868047..2868252,2868652..2868719,2874536..2874779))
location: region:2848513-2874779:-1
so has part: feature:2874536-2874779:-1:exon
so has part: feature:2868652-2868719:-1:exon
so has part: feature:2868047-2868252:-1:exon
so has part: feature:2867819-2867939:-1:exon
so has part: feature:2866485-2866548:-1:exon
so has part: feature:2866219-2866308:-1:exon
so has part: feature:2865808-2866004:-1:exon
so has part: feature:2864112-2864186:-1:exon
so has part: feature:2857203-2857266:-1:exon
so has part: feature:2856087-2856243:-1:exon
so has part: feature:2850598-2850666:-1:exon
so has part: feature:2850401-2850487:-1:exon
so has part: feature:2850150-2850203:-1:exon
so has part: feature:2849943-2850023:-1:exon
so has part: feature:2849424-2849492:-1:exon
so has part: feature:2849094-2849183:-1:exon
so has part: feature:2848840-2848952:-1:exon
so has part: feature:2848513-2848564:-1:exon

XP_023825979.1
type: Protein
SIO_000068: ncbiprotein

position:2848513:-1
position: 2848513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2874779:-1
position: 2874779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2874536-2874779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2868652-2868719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2868047-2868252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2867819-2867939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2866485-2866548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2866219-2866308:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2865808-2866004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2864112-2864186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857203-2857266:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2856087-2856243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2850598-2850666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2850401-2850487:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2850150-2850203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2849943-2850023:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2849424-2849492:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2849094-2849183:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2848840-2848952:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2848513-2848564:-1:exon

LOC111952010
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111952010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2894219..2895700)
location: region:2894219-2895700:-1
so has part: feature:2894219-2895700:-1:exon
subclass of: SO_0000011

111952010
type: Gene
SIO_000068: ncbigene

position:2894219:-1
position: 2894219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2895700:-1
position: 2895700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2894219-2895700:-1:exon

LOC111952010
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111952010
product: uncharacterized LOC111952010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XR_002875667.1
SIO_010081: LOC111952010
subclass of: SO_0000673
so part of: LOC111952010
location: complement(join(2894219..2895412,2895616..2895700))
location: region:2894219-2895700:-1
so has part: feature:2895616-2895700:-1:exon
so has part: feature:2894219-2895412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2895616-2895700:-1:exon

position:2895616:-1
position: 2895616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2894219-2895412:-1:exon

position:2895412:-1
position: 2895412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111952011
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111952011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2895737..2949270)
location: region:2895737-2949270:-1
so has part: feature:2895737-2949270:-1:exon
subclass of: SO_0000010

111952011
type: Gene
SIO_000068: ncbigene

position:2895737:-1
position: 2895737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2949270:-1
position: 2949270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2895737-2949270:-1:exon

LOC111952011
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952011
product: LIM domain-binding protein 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023970416.1
SIO_010081: LOC111952011
subclass of: SO_0000673
so part of: LOC111952011
location: complement(join(2895737..2896532,2897781..2897913,2903976..2904099,2904412..2904495,2906966..2907088,2907288..2907460,2907590..2907692,2907826..2907901,2908049..2908093,2908193..2908298,2939181..2939282,2949148..2949270))
location: region:2895737-2949270:-1
so has part: feature:2949148-2949270:-1:exon
so has part: feature:2939181-2939282:-1:exon
so has part: feature:2908193-2908298:-1:exon
so has part: feature:2908049-2908093:-1:exon
so has part: feature:2907826-2907901:-1:exon
so has part: feature:2907590-2907692:-1:exon
so has part: feature:2907288-2907460:-1:exon
so has part: feature:2906966-2907088:-1:exon
so has part: feature:2904412-2904495:-1:exon
so has part: feature:2903976-2904099:-1:exon
so has part: feature:2897781-2897913:-1:exon
so has part: feature:2895737-2896532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2949148-2949270:-1:exon

position:2949148:-1
position: 2949148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2939181-2939282:-1:exon

position:2939181:-1
position: 2939181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939282:-1
position: 2939282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2908193-2908298:-1:exon

position:2908193:-1
position: 2908193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2908298:-1
position: 2908298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2908049-2908093:-1:exon

position:2908049:-1
position: 2908049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2908093:-1
position: 2908093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2907826-2907901:-1:exon

position:2907826:-1
position: 2907826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907901:-1
position: 2907901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2907590-2907692:-1:exon

position:2907590:-1
position: 2907590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907692:-1
position: 2907692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2907288-2907460:-1:exon

position:2907288:-1
position: 2907288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907460:-1
position: 2907460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2906966-2907088:-1:exon

position:2906966:-1
position: 2906966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907088:-1
position: 2907088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2904412-2904495:-1:exon

position:2904412:-1
position: 2904412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904495:-1
position: 2904495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2903976-2904099:-1:exon

position:2903976:-1
position: 2903976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904099:-1
position: 2904099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2897781-2897913:-1:exon

position:2897781:-1
position: 2897781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2897913:-1
position: 2897913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2895737-2896532:-1:exon

position:2896532:-1
position: 2896532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111952011
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952011
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2897847..2897849),aa:OTHER)
product: LOW QUALITY PROTEIN: LIM domain-binding protein 1-like
translation: MSVGGCACPGCSSKSFKLYSPKEPGPNGSAFPPFHPGTMLDRDVGPTPMYPPSYLEPGMGRPTPYGNQTDYRIFELNKRLQNWTEDCDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELFYTLKHPKESFHTNFVSLDCDQCTMVTQKGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHREVLPRSILAMHVQDPQMLDQLAKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGATXAAGGGNNSKKKSPANNFPLSTQDVMMVGEPTLMGGEFGDEDERLITRLENGQFDTANGAGGLEDEDSFGSSPALGGAHSPWNNKTPSSQDSKNDAQ
SIO_010081: LOC111952011
subclass of: SO_0000673
so part of: LOC111952011
location: complement(join(2896308..2896532,2897781..2897913,2903976..2904099,2904412..2904495,2906966..2907088,2907288..2907460,2907590..2907692,2907826..2907901,2908049..2908093,2908193..2908298,2939181..2939208))
location: region:2896308-2939208:-1
so has part: feature:2939181-2939208:-1:exon
so has part: feature:2908193-2908298:-1:exon
so has part: feature:2908049-2908093:-1:exon
so has part: feature:2907826-2907901:-1:exon
so has part: feature:2907590-2907692:-1:exon
so has part: feature:2907288-2907460:-1:exon
so has part: feature:2906966-2907088:-1:exon
so has part: feature:2904412-2904495:-1:exon
so has part: feature:2903976-2904099:-1:exon
so has part: feature:2897781-2897913:-1:exon
so has part: feature:2896308-2896532:-1:exon

XP_023826184.1
type: Protein
SIO_000068: ncbiprotein

position:2896308:-1
position: 2896308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939208:-1
position: 2939208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2939181-2939208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2908193-2908298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2908049-2908093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2907826-2907901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2907590-2907692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2907288-2907460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2906966-2907088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904412-2904495:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2903976-2904099:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2897781-2897913:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2896308-2896532:-1:exon

LOC111951773
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2958533..3001022
location: region:2958533-3001022:1
so has part: feature:2958533-3001022:1:exon
subclass of: SO_0000010

111951773
type: Gene
SIO_000068: ncbigene

position:2958533:1
position: 2958533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3001022:1
position: 3001022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2958533-3001022:1:exon

LOC111951773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951773
product: peroxisome proliferator-activated receptor gamma coactivator-related protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023969976.1
SIO_010081: LOC111951773
subclass of: SO_0000673
so part of: LOC111951773
location: join(2958533..2958700,2971043..2971168,2971337..2971489,2978226..2978306,2978571..2980740,2980848..2980901,2989286..2989346,2989640..2989707,2991204..2991918,2992259..2992474,2998215..2998293,2998603..2998724,2999289..2999440,2999612..3001022)
location: region:2958533-3001022:1
so has part: feature:2958533-2958700:1:exon
so has part: feature:2971043-2971168:1:exon
so has part: feature:2971337-2971489:1:exon
so has part: feature:2978226-2978306:1:exon
so has part: feature:2978571-2980740:1:exon
so has part: feature:2980848-2980901:1:exon
so has part: feature:2989286-2989346:1:exon
so has part: feature:2989640-2989707:1:exon
so has part: feature:2991204-2991918:1:exon
so has part: feature:2992259-2992474:1:exon
so has part: feature:2998215-2998293:1:exon
so has part: feature:2998603-2998724:1:exon
so has part: feature:2999289-2999440:1:exon
so has part: feature:2999612-3001022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2958533-2958700:1:exon

position:2958700:1
position: 2958700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2971043-2971168:1:exon

position:2971043:1
position: 2971043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2971168:1
position: 2971168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2971337-2971489:1:exon

position:2971337:1
position: 2971337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2971489:1
position: 2971489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2978226-2978306:1:exon

position:2978226:1
position: 2978226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2978306:1
position: 2978306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2978571-2980740:1:exon

position:2978571:1
position: 2978571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2980740:1
position: 2980740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2980848-2980901:1:exon

position:2980848:1
position: 2980848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2980901:1
position: 2980901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2989286-2989346:1:exon

position:2989286:1
position: 2989286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2989346:1
position: 2989346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2989640-2989707:1:exon

position:2989640:1
position: 2989640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2989707:1
position: 2989707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2991204-2991918:1:exon

position:2991204:1
position: 2991204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2991918:1
position: 2991918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2992259-2992474:1:exon

position:2992259:1
position: 2992259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2992474:1
position: 2992474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2998215-2998293:1:exon

position:2998215:1
position: 2998215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2998293:1
position: 2998293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2998603-2998724:1:exon

position:2998603:1
position: 2998603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2998724:1
position: 2998724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2999289-2999440:1:exon

position:2999289:1
position: 2999289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2999440:1
position: 2999440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2999612-3001022:1:exon

position:2999612:1
position: 2999612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome proliferator-activated receptor gamma coactivator-related protein 1
translation: MAARWGAGEAMLTACNMDFFSTNTLDEAVILHGGMSSDSLELETGEALEALCCLDASILSIFEDTTTGENKVGLDEDNEATLLTALTEILDNVDNENLSPFDTLPDSDLLTGQKGREHSPLRRMLCLSHSPPESETPCNTRQFSTGKSLPRTQESVQRSDGEEEEDAEACSPSLSPDRQPSSPEQELLNWGGLSLPLPLALEQHMDGESMSVSLGELVRHMHPYCMAVCMEDEGEELLLAEEGILLEVVEHGEHGETIFAIPDMGIPCSHLSLSLPGVEDSFKAEQRIPDEISEVDMLETPESEAANDVVVDDTAEVADPAATLRAKASGENVIYRRPKEETVERCLSRRKKKRKNKVKPSPAEVTPEPAQAEGRVLRSAAHRCAAQESSPRKPIKETTRPEKKDKESFSYAISMAAPEAPKQKTRATHAGETQHIQRQSHVEVTTLTLSTHPSVKVIPASDHVSKVMASDXLPVTMTPEKVPQPTTGCEKPQSLLASAANPTAPQAMTINPAAPQALNPSELPVSVAPQAIMQSNGASLAVPQVIPQASQAIEPKPKPLSLQQYRLLRQQKKPAPLERPEDQSTKWPSLPDAPTELPPIPCLPIPSPRDPRRPHPSPGKTEVEVKAAWQPMGPGAPPTPEALLVPPAYMLASKSSSPSKASSANASPTTPPQQAAVPTPQPAKASQPPISVVPSSSTVSVVPPPPQNPFVTCNIPQAPHPALTNPLLQSQVPCKTVVLIKSQSSSGASSKTTTDANRPTLIATVAQKPTPIAAALLEKTLNCTANAAAVCVQKPTPAAPLKVVTTLQKGVVTLPWPKMPELPTVTPGSTPAKPSTTQSSKPAVRCTTAQEAPKVKSPTQELIEAFTSEIGIEAADLTSLLEQFEETQAKEEQYVLEVSGRAAAVGNSSVEQPCDRTVVERVGAHDLASTAGLTPPATPPHQMWKPLAPVALLGKSRAADAPKPSPSKAIQINARPLPTTKLRSKPPSPPVTPTPNTVALNLAFSDHDYCLPQKEPVAIAEEPGKRWNVKQQAAITIRTIEPLGSTTTRAPQRIPAPSLQTLIPALGTKTQQALLPLDVRTDRTSSVLGTPEASPTRQEQQVCPLEMSPKKGRSYRGHNITCSPSPREGKGGRERKRRIHHSSSPCSTDSESDFHSSSSQSRSCSPPRKRYRPRHSKSSSSSSSCSSRSSSRSSSRSSSPSVSRSPPRRRYSYSSSRSGSWSRSRSRSPHRRAWRRGRSPRSPSLRPGYRPESRENSQEVKRLKEKAIEERRVVYVGRIRGTMTRKELRERFSLYGEIEECTLHFRDHGDNYGFVTYYDTKDAFTAIENGGKLRKPDELPFDLCFGGRRQFCKATYADLDSNREYDPSPAKGKFDVLDFDTLLKQAQKGLKR
SIO_010081: LOC111951773
subclass of: SO_0000673
so part of: LOC111951773
location: join(2958620..2958700,2971043..2971168,2971337..2971489,2978226..2978306,2978571..2980740,2980848..2980901,2989286..2989346,2989640..2989707,2991204..2991918,2992259..2992474,2998215..2998293,2998603..2998724,2999289..2999440,2999612..2999712)
location: region:2958620-2999712:1
so has part: feature:2958620-2958700:1:exon
so has part: feature:2971043-2971168:1:exon
so has part: feature:2971337-2971489:1:exon
so has part: feature:2978226-2978306:1:exon
so has part: feature:2978571-2980740:1:exon
so has part: feature:2980848-2980901:1:exon
so has part: feature:2989286-2989346:1:exon
so has part: feature:2989640-2989707:1:exon
so has part: feature:2991204-2991918:1:exon
so has part: feature:2992259-2992474:1:exon
so has part: feature:2998215-2998293:1:exon
so has part: feature:2998603-2998724:1:exon
so has part: feature:2999289-2999440:1:exon
so has part: feature:2999612-2999712:1:exon

XP_023825744.1
type: Protein
SIO_000068: ncbiprotein

position:2958620:1
position: 2958620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2999712:1
position: 2999712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2958620-2958700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971043-2971168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2971337-2971489:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2978226-2978306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2978571-2980740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2980848-2980901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2989286-2989346:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2989640-2989707:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2991204-2991918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2992259-2992474:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2998215-2998293:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2998603-2998724:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2999289-2999440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2999612-2999712:1:exon

LOC111952094
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111952094
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2998976..2999117
location: region:2998976-2999117:1
so has part: feature:2998976-2999117:1:exon
subclass of: SO_0000578

111952094
type: Gene
SIO_000068: ncbigene

position:2998976:1
position: 2998976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2999117:1
position: 2999117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2998976-2999117:1:exon

LOC111952094
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: snoRNA
gene: LOC111952094
product: small nucleolar RNA SNORA50
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00407
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002875683.1
SIO_010081: LOC111952094
subclass of: SO_0000673
so part of: LOC111952094
location: 2998976..2999117
location: region:2998976-2999117:1
so has part: feature:2998976-2999117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2998976-2999117:1:exon

LOC111952037
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111952037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3009416..3015450)
location: region:3009416-3015450:-1
so has part: feature:3009416-3015450:-1:exon
subclass of: SO_0000011

111952037
type: Gene
SIO_000068: ncbigene

position:3009416:-1
position: 3009416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3015450:-1
position: 3015450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3009416-3015450:-1:exon

LOC111952037
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111952037
product: uncharacterized LOC111952037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_002875674.1
SIO_010081: LOC111952037
subclass of: SO_0000673
so part of: LOC111952037
location: complement(join(3009416..3011234,3014203..3014468,3014676..3015450))
location: region:3009416-3015450:-1
so has part: feature:3014676-3015450:-1:exon
so has part: feature:3014203-3014468:-1:exon
so has part: feature:3009416-3011234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3014676-3015450:-1:exon

position:3014676:-1
position: 3014676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3014203-3014468:-1:exon

position:3014203:-1
position: 3014203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3014468:-1
position: 3014468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3009416-3011234:-1:exon

position:3011234:-1
position: 3011234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951659
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3018699..3052372
location: region:3018699-3052372:1
so has part: feature:3018699-3052372:1:exon
subclass of: SO_0000010

111951659
type: Gene
SIO_000068: ncbigene

position:3018699:1
position: 3018699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3052372:1
position: 3052372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3018699-3052372:1:exon

LOC111951659
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951659
product: protein O-GlcNAcase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023969873.1
SIO_010081: LOC111951659
subclass of: SO_0000673
so part of: LOC111951659
location: join(3018699..3019419,3020494..3020545,3020745..3020842,3023851..3023981,3028910..3029081,3029531..3029629,3029764..3030048,3030780..3030938,3031188..3031366,3031640..3031894,3034064..3034267,3039315..3039489,3043636..3043721,3048246..3048350,3048660..3048751,3048968..3049160,3049495..3049654,3050036..3052372)
location: region:3018699-3052372:1
so has part: feature:3018699-3019419:1:exon
so has part: feature:3020494-3020545:1:exon
so has part: feature:3020745-3020842:1:exon
so has part: feature:3023851-3023981:1:exon
so has part: feature:3028910-3029081:1:exon
so has part: feature:3029531-3029629:1:exon
so has part: feature:3029764-3030048:1:exon
so has part: feature:3030780-3030938:1:exon
so has part: feature:3031188-3031366:1:exon
so has part: feature:3031640-3031894:1:exon
so has part: feature:3034064-3034267:1:exon
so has part: feature:3039315-3039489:1:exon
so has part: feature:3043636-3043721:1:exon
so has part: feature:3048246-3048350:1:exon
so has part: feature:3048660-3048751:1:exon
so has part: feature:3048968-3049160:1:exon
so has part: feature:3049495-3049654:1:exon
so has part: feature:3050036-3052372:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3018699-3019419:1:exon

position:3019419:1
position: 3019419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3020494-3020545:1:exon

position:3020494:1
position: 3020494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3020545:1
position: 3020545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3020745-3020842:1:exon

position:3020745:1
position: 3020745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3020842:1
position: 3020842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3023851-3023981:1:exon

position:3023851:1
position: 3023851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3023981:1
position: 3023981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3028910-3029081:1:exon

position:3028910:1
position: 3028910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029081:1
position: 3029081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3029531-3029629:1:exon

position:3029531:1
position: 3029531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029629:1
position: 3029629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3029764-3030048:1:exon

position:3029764:1
position: 3029764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3030048:1
position: 3030048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3030780-3030938:1:exon

position:3030780:1
position: 3030780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3030938:1
position: 3030938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3031188-3031366:1:exon

position:3031188:1
position: 3031188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3031366:1
position: 3031366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3031640-3031894:1:exon

position:3031640:1
position: 3031640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3031894:1
position: 3031894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3034064-3034267:1:exon

position:3034064:1
position: 3034064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3034267:1
position: 3034267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3039315-3039489:1:exon

position:3039315:1
position: 3039315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039489:1
position: 3039489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3043636-3043721:1:exon

position:3043636:1
position: 3043636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3043721:1
position: 3043721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3048246-3048350:1:exon

position:3048246:1
position: 3048246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3048350:1
position: 3048350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3048660-3048751:1:exon

position:3048660:1
position: 3048660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3048751:1
position: 3048751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3048968-3049160:1:exon

position:3048968:1
position: 3048968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3049160:1
position: 3049160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3049495-3049654:1:exon

position:3049495:1
position: 3049495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3049654:1
position: 3049654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3050036-3052372:1:exon

position:3050036:1
position: 3050036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951659
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951659
product: protein O-GlcNAcase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_023969874.1
SIO_010081: LOC111951659
subclass of: SO_0000673
so part of: LOC111951659
location: join(3018700..3019419,3020494..3020545,3020745..3020842,3023851..3023981,3028910..3029081,3029531..3029629,3029764..3030048,3030780..3030938,3031188..3031357,3031640..3031894,3034064..3034267,3039315..3039489,3043636..3043721,3048246..3048350,3048660..3048751,3048968..3049160,3049495..3049654,3050036..3052372)
location: region:3018700-3052372:1
so has part: feature:3018700-3019419:1:exon
so has part: feature:3020494-3020545:1:exon
so has part: feature:3020745-3020842:1:exon
so has part: feature:3023851-3023981:1:exon
so has part: feature:3028910-3029081:1:exon
so has part: feature:3029531-3029629:1:exon
so has part: feature:3029764-3030048:1:exon
so has part: feature:3030780-3030938:1:exon
so has part: feature:3031188-3031357:1:exon
so has part: feature:3031640-3031894:1:exon
so has part: feature:3034064-3034267:1:exon
so has part: feature:3039315-3039489:1:exon
so has part: feature:3043636-3043721:1:exon
so has part: feature:3048246-3048350:1:exon
so has part: feature:3048660-3048751:1:exon
so has part: feature:3048968-3049160:1:exon
so has part: feature:3049495-3049654:1:exon
so has part: feature:3050036-3052372:1:exon

position:3018700:1
position: 3018700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3018700-3019419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3020494-3020545:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3020745-3020842:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023851-3023981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028910-3029081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3029531-3029629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3029764-3030048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3030780-3030938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3031188-3031357:1:exon

position:3031357:1
position: 3031357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3031640-3031894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3034064-3034267:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3039315-3039489:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3043636-3043721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3048246-3048350:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3048660-3048751:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3048968-3049160:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3049495-3049654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3050036-3052372:1:exon

LOC111951659
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-GlcNAcase isoform X1
translation: MVQKDTPVVDTSQAETEXSPCSGPSKAGSEASGLVEEPINIEVELSGRRKFISGVVEGFYGRPWTMEQRKELFRRQQKWGLNTYLYAPKDDYKHRMFWREMYSVEEAEQLITLISAAKEYGIEFIYAISPGLDITFSNQKEVSTLKRKLDQVTHFGCKSFALLFDDIDHNMCPADKEVFSSFAHAQVSITNEIFQYLGEPETFLFCPTEYCGTFCYPNVAQSPYLHTVGEKLLPGIEVLWTGPKVVSKEITVESIEEVSKILKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFESNFVAIHTLATWYKSNMNGVRKDVAMTDGEDSTVSIQIKLENEGSDEELETDMLYRPQLALKLALTEWLVEFLVPHQYNSRQVPHSGAKSSAINVPSLGASSLCAGTTVFQQPIMAPTGAPDPNNHPMAKSLQQQEVGEVDVEKKESDEEPMEMVVEKPYETDPEPDPVAEAETETKNSLVLLDKMVEELKPMDTDREVLVPESKSPEEDIDMAPMQTDEQLKQDVFVLGPNEKVLYTAESLSLEDLTLLAELFYLPYEYGPKALHMLKEFNWLRANCSTVGVDCNDKEPEKVVEWQSRAERFEEMCCSVIQMFTRLSNSANRTILYDLYPYIWDIKSIXSMVKSFVQWLGCRSQATAQFLSGDQEPWAFRGGLAGEFQRFLPIDGANDLFFQPPPALPTSKIYSIRPCYPKDEHAVYKICREMYSEGVEELPFGGEEPDLIGDRLVGGFLNLSPDYGFVLEDEEGICGYALGTVDVKPFVKKCKMSWIPSMQEKYNKPDCQKDLSDAEKMMLSFHEEEEGLPESFLSNFPSLIKMDIHAKVIDPSVAKSMMGCLLSCLKANGSIGAFCEVRQADKRMIDFYSKLGCFEVAKMEGFPKNIIIMGRSL
SIO_010081: LOC111951659
subclass of: SO_0000673
so part of: LOC111951659
location: join(3019248..3019419,3020494..3020545,3020745..3020842,3023851..3023981,3028910..3029081,3029531..3029629,3029764..3030048,3030780..3030938,3031188..3031366,3031640..3031894,3034064..3034267,3039315..3039489,3043636..3043721,3048246..3048350,3048660..3048751,3048968..3049160,3049495..3049654,3050036..3050172)
location: region:3019248-3050172:1
so has part: feature:3019248-3019419:1:exon
so has part: feature:3020494-3020545:1:exon
so has part: feature:3020745-3020842:1:exon
so has part: feature:3023851-3023981:1:exon
so has part: feature:3028910-3029081:1:exon
so has part: feature:3029531-3029629:1:exon
so has part: feature:3029764-3030048:1:exon
so has part: feature:3030780-3030938:1:exon
so has part: feature:3031188-3031366:1:exon
so has part: feature:3031640-3031894:1:exon
so has part: feature:3034064-3034267:1:exon
so has part: feature:3039315-3039489:1:exon
so has part: feature:3043636-3043721:1:exon
so has part: feature:3048246-3048350:1:exon
so has part: feature:3048660-3048751:1:exon
so has part: feature:3048968-3049160:1:exon
so has part: feature:3049495-3049654:1:exon
so has part: feature:3050036-3050172:1:exon

XP_023825641.1
type: Protein
SIO_000068: ncbiprotein

position:3019248:1
position: 3019248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3050172:1
position: 3050172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3019248-3019419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3020494-3020545:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3020745-3020842:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023851-3023981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028910-3029081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3029531-3029629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3029764-3030048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3030780-3030938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3031188-3031366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3031640-3031894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3034064-3034267:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3039315-3039489:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3043636-3043721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3048246-3048350:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3048660-3048751:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3048968-3049160:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3049495-3049654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3050036-3050172:1:exon

LOC111951659
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-GlcNAcase isoform X2
translation: MVQKDTPVVDTSQAETEXSPCSGPSKAGSEASGLVEEPINIEVELSGRRKFISGVVEGFYGRPWTMEQRKELFRRQQKWGLNTYLYAPKDDYKHRMFWREMYSVEEAEQLITLISAAKEYGIEFIYAISPGLDITFSNQKEVSTLKRKLDQVTHFGCKSFALLFDDIDHNMCPADKEVFSSFAHAQVSITNEIFQYLGEPETFLFCPTEYCGTFCYPNVAQSPYLHTVGEKLLPGIEVLWTGPKVVSKEITVESIEEVSKILKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFESNFVAIHTLATWYKSNMNGVRKDVAMTDGEDSTVSIQIKLENEGSDEELETDMLYRPQLALKLALTEWLVEFLVPHQYNSRQVPHSGAKSSAINVPSLGASSLCAGTTVFQQPIMAPTGAPDPNNHPMAKSLQQQEVDVEKKESDEEPMEMVVEKPYETDPEPDPVAEAETETKNSLVLLDKMVEELKPMDTDREVLVPESKSPEEDIDMAPMQTDEQLKQDVFVLGPNEKVLYTAESLSLEDLTLLAELFYLPYEYGPKALHMLKEFNWLRANCSTVGVDCNDKEPEKVVEWQSRAERFEEMCCSVIQMFTRLSNSANRTILYDLYPYIWDIKSIXSMVKSFVQWLGCRSQATAQFLSGDQEPWAFRGGLAGEFQRFLPIDGANDLFFQPPPALPTSKIYSIRPCYPKDEHAVYKICREMYSEGVEELPFGGEEPDLIGDRLVGGFLNLSPDYGFVLEDEEGICGYALGTVDVKPFVKKCKMSWIPSMQEKYNKPDCQKDLSDAEKMMLSFHEEEEGLPESFLSNFPSLIKMDIHAKVIDPSVAKSMMGCLLSCLKANGSIGAFCEVRQADKRMIDFYSKLGCFEVAKMEGFPKNIIIMGRSL
SIO_010081: LOC111951659
subclass of: SO_0000673
so part of: LOC111951659
location: join(3019248..3019419,3020494..3020545,3020745..3020842,3023851..3023981,3028910..3029081,3029531..3029629,3029764..3030048,3030780..3030938,3031188..3031357,3031640..3031894,3034064..3034267,3039315..3039489,3043636..3043721,3048246..3048350,3048660..3048751,3048968..3049160,3049495..3049654,3050036..3050172)
location: region:3019248-3050172:1
so has part: feature:3019248-3019419:1:exon
so has part: feature:3020494-3020545:1:exon
so has part: feature:3020745-3020842:1:exon
so has part: feature:3023851-3023981:1:exon
so has part: feature:3028910-3029081:1:exon
so has part: feature:3029531-3029629:1:exon
so has part: feature:3029764-3030048:1:exon
so has part: feature:3030780-3030938:1:exon
so has part: feature:3031188-3031357:1:exon
so has part: feature:3031640-3031894:1:exon
so has part: feature:3034064-3034267:1:exon
so has part: feature:3039315-3039489:1:exon
so has part: feature:3043636-3043721:1:exon
so has part: feature:3048246-3048350:1:exon
so has part: feature:3048660-3048751:1:exon
so has part: feature:3048968-3049160:1:exon
so has part: feature:3049495-3049654:1:exon
so has part: feature:3050036-3050172:1:exon

XP_023825642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3019248-3019419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3020494-3020545:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3020745-3020842:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023851-3023981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028910-3029081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3029531-3029629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3029764-3030048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3030780-3030938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3031188-3031357:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3031640-3031894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3034064-3034267:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3039315-3039489:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3043636-3043721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3048246-3048350:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3048660-3048751:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3048968-3049160:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3049495-3049654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3050036-3050172:1:exon

LOC111951659
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951659
product: protein O-GlcNAcase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023969875.1
SIO_010081: LOC111951659
subclass of: SO_0000673
so part of: LOC111951659
location: join(3020756..3020842,3023856..3023981,3028910..3029081,3029531..3029629,3029764..3030048,3030780..3030938,3031188..3031366,3031640..3031894,3034064..3034267,3039315..3039489,3043636..3043721,3048246..3048350,3048660..3048751,3048968..3049160,3049495..3049654,3050036..3052372)
location: region:3020756-3052372:1
so has part: feature:3020756-3020842:1:exon
so has part: feature:3023856-3023981:1:exon
so has part: feature:3028910-3029081:1:exon
so has part: feature:3029531-3029629:1:exon
so has part: feature:3029764-3030048:1:exon
so has part: feature:3030780-3030938:1:exon
so has part: feature:3031188-3031366:1:exon
so has part: feature:3031640-3031894:1:exon
so has part: feature:3034064-3034267:1:exon
so has part: feature:3039315-3039489:1:exon
so has part: feature:3043636-3043721:1:exon
so has part: feature:3048246-3048350:1:exon
so has part: feature:3048660-3048751:1:exon
so has part: feature:3048968-3049160:1:exon
so has part: feature:3049495-3049654:1:exon
so has part: feature:3050036-3052372:1:exon

position:3020756:1
position: 3020756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3020756-3020842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3023856-3023981:1:exon

position:3023856:1
position: 3023856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3028910-3029081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3029531-3029629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3029764-3030048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3030780-3030938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3031188-3031366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3031640-3031894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3034064-3034267:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3039315-3039489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3043636-3043721:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3048246-3048350:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3048660-3048751:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3048968-3049160:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3049495-3049654:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3050036-3052372:1:exon

LOC111951659
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-GlcNAcase isoform X3
translation: MCPADKEVFSSFAHAQVSITNEIFQYLGEPETFLFCPTEYCGTFCYPNVAQSPYLHTVGEKLLPGIEVLWTGPKVVSKEITVESIEEVSKILKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFESNFVAIHTLATWYKSNMNGVRKDVAMTDGEDSTVSIQIKLENEGSDEELETDMLYRPQLALKLALTEWLVEFLVPHQYNSRQVPHSGAKSSAINVPSLGASSLCAGTTVFQQPIMAPTGAPDPNNHPMAKSLQQQEVGEVDVEKKESDEEPMEMVVEKPYETDPEPDPVAEAETETKNSLVLLDKMVEELKPMDTDREVLVPESKSPEEDIDMAPMQTDEQLKQDVFVLGPNEKVLYTAESLSLEDLTLLAELFYLPYEYGPKALHMLKEFNWLRANCSTVGVDCNDKEPEKVVEWQSRAERFEEMCCSVIQMFTRLSNSANRTILYDLYPYIWDIKSIXSMVKSFVQWLGCRSQATAQFLSGDQEPWAFRGGLAGEFQRFLPIDGANDLFFQPPPALPTSKIYSIRPCYPKDEHAVYKICREMYSEGVEELPFGGEEPDLIGDRLVGGFLNLSPDYGFVLEDEEGICGYALGTVDVKPFVKKCKMSWIPSMQEKYNKPDCQKDLSDAEKMMLSFHEEEEGLPESFLSNFPSLIKMDIHAKVIDPSVAKSMMGCLLSCLKANGSIGAFCEVRQADKRMIDFYSKLGCFEVAKMEGFPKNIIIMGRSL
SIO_010081: LOC111951659
subclass of: SO_0000673
so part of: LOC111951659
location: join(3028967..3029081,3029531..3029629,3029764..3030048,3030780..3030938,3031188..3031366,3031640..3031894,3034064..3034267,3039315..3039489,3043636..3043721,3048246..3048350,3048660..3048751,3048968..3049160,3049495..3049654,3050036..3050172)
location: region:3028967-3050172:1
so has part: feature:3028967-3029081:1:exon
so has part: feature:3029531-3029629:1:exon
so has part: feature:3029764-3030048:1:exon
so has part: feature:3030780-3030938:1:exon
so has part: feature:3031188-3031366:1:exon
so has part: feature:3031640-3031894:1:exon
so has part: feature:3034064-3034267:1:exon
so has part: feature:3039315-3039489:1:exon
so has part: feature:3043636-3043721:1:exon
so has part: feature:3048246-3048350:1:exon
so has part: feature:3048660-3048751:1:exon
so has part: feature:3048968-3049160:1:exon
so has part: feature:3049495-3049654:1:exon
so has part: feature:3050036-3050172:1:exon

XP_023825643.1
type: Protein
SIO_000068: ncbiprotein

position:3028967:1
position: 3028967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3028967-3029081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3029531-3029629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029764-3030048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3030780-3030938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3031188-3031366:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3031640-3031894:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3034064-3034267:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3039315-3039489:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3043636-3043721:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3048246-3048350:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3048660-3048751:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3048968-3049160:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3049495-3049654:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3050036-3050172:1:exon

LOC111951847
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3069518..3087378)
location: region:3069518-3087378:-1
so has part: feature:3069518-3087378:-1:exon
subclass of: SO_0000010

111951847
type: Gene
SIO_000068: ncbigene

position:3069518:-1
position: 3069518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3087378:-1
position: 3087378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3069518-3087378:-1:exon

LOC111951847
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951847
product: suppressor of fused homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_023970099.1
SIO_010081: LOC111951847
subclass of: SO_0000673
so part of: LOC111951847
location: complement(join(3069518..3071434,3074654..3074722,3074812..3074950,3075222..3075356,3075881..3075983,3078322..3078475,3078636..3078708,3078822..3078907,3079042..3079184,3081583..3081719,3086247..3086381,3087021..3087378))
location: region:3069518-3087378:-1
so has part: feature:3087021-3087378:-1:exon
so has part: feature:3086247-3086381:-1:exon
so has part: feature:3081583-3081719:-1:exon
so has part: feature:3079042-3079184:-1:exon
so has part: feature:3078822-3078907:-1:exon
so has part: feature:3078636-3078708:-1:exon
so has part: feature:3078322-3078475:-1:exon
so has part: feature:3075881-3075983:-1:exon
so has part: feature:3075222-3075356:-1:exon
so has part: feature:3074812-3074950:-1:exon
so has part: feature:3074654-3074722:-1:exon
so has part: feature:3069518-3071434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3087021-3087378:-1:exon

position:3087021:-1
position: 3087021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3086247-3086381:-1:exon

position:3086247:-1
position: 3086247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3086381:-1
position: 3086381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3081583-3081719:-1:exon

position:3081583:-1
position: 3081583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3081719:-1
position: 3081719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3079042-3079184:-1:exon

position:3079042:-1
position: 3079042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3079184:-1
position: 3079184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3078822-3078907:-1:exon

position:3078822:-1
position: 3078822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3078907:-1
position: 3078907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3078636-3078708:-1:exon

position:3078636:-1
position: 3078636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3078708:-1
position: 3078708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3078322-3078475:-1:exon

position:3078322:-1
position: 3078322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3078475:-1
position: 3078475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3075881-3075983:-1:exon

position:3075881:-1
position: 3075881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3075983:-1
position: 3075983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3075222-3075356:-1:exon

position:3075222:-1
position: 3075222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3075356:-1
position: 3075356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3074812-3074950:-1:exon

position:3074812:-1
position: 3074812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3074950:-1
position: 3074950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3074654-3074722:-1:exon

position:3074654:-1
position: 3074654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3074722:-1
position: 3074722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3069518-3071434:-1:exon

position:3071434:-1
position: 3071434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951847
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951847
product: suppressor of fused homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_023970098.1
SIO_010081: LOC111951847
subclass of: SO_0000673
so part of: LOC111951847
location: complement(join(3069518..3071434,3074654..3074722,3074812..3074950,3075222..3075356,3075881..3075983,3078322..3078478,3078636..3078708,3078822..3078907,3079042..3079184,3081583..3081719,3086247..3086381,3087021..3087378))
location: region:3069518-3087378:-1
so has part: feature:3087021-3087378:-1:exon
so has part: feature:3086247-3086381:-1:exon
so has part: feature:3081583-3081719:-1:exon
so has part: feature:3079042-3079184:-1:exon
so has part: feature:3078822-3078907:-1:exon
so has part: feature:3078636-3078708:-1:exon
so has part: feature:3078322-3078478:-1:exon
so has part: feature:3075881-3075983:-1:exon
so has part: feature:3075222-3075356:-1:exon
so has part: feature:3074812-3074950:-1:exon
so has part: feature:3074654-3074722:-1:exon
so has part: feature:3069518-3071434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3087021-3087378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3086247-3086381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3081583-3081719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3079042-3079184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3078822-3078907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3078636-3078708:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3078322-3078478:-1:exon

position:3078478:-1
position: 3078478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3075881-3075983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075222-3075356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3074812-3074950:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3074654-3074722:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3069518-3071434:-1:exon

LOC111951847
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of fused homolog isoform X2
translation: MDEVRPINGPAAAPGLASIFPPGLQAIYGECRRLYPDQANPLQVTAIVKYWLGGPDPLDYISMYRNVGCAAQDVQEHWHYISFGLSDLYGDNRVHEFTGQEGPSGFGFELTFRLKREVGETAPPTWPAELMQGLARYVFQSENTFCSGDHISWHSPLDNSESRIQHMLLTEDPQISPVHTPFGLVNFLQIVGVCTEELQAAQQWNGQGILELLRGVHVAGGPWLITDMRRGETMFDIDPHLQERVDQGIETEGSNLSGVSAKCVWDDLSRPSEDEEDSRSICIGSQPRRLSEKDTEQIREALRKGLEFNTKAALPPINSQKQGHDRPQSRKDSLESESSAAIVPHELVRTRQLESVHLKFNQESGTLLPLCLRGRLLHGRHFTYKSINGDTAITFVSTGVEGAFATEEHPYAAHGPWLQILLTEEFVEQMLGDLSELNTREETKLPKEYSWPEKNLKISVLPDSVFDNPLQ
SIO_010081: LOC111951847
subclass of: SO_0000673
so part of: LOC111951847
location: complement(join(3071345..3071434,3074654..3074722,3074812..3074950,3075222..3075356,3075881..3075983,3078322..3078475,3078636..3078708,3078822..3078907,3079042..3079184,3081583..3081719,3086247..3086381,3087021..3087172))
location: region:3071345-3087172:-1
so has part: feature:3087021-3087172:-1:exon
so has part: feature:3086247-3086381:-1:exon
so has part: feature:3081583-3081719:-1:exon
so has part: feature:3079042-3079184:-1:exon
so has part: feature:3078822-3078907:-1:exon
so has part: feature:3078636-3078708:-1:exon
so has part: feature:3078322-3078475:-1:exon
so has part: feature:3075881-3075983:-1:exon
so has part: feature:3075222-3075356:-1:exon
so has part: feature:3074812-3074950:-1:exon
so has part: feature:3074654-3074722:-1:exon
so has part: feature:3071345-3071434:-1:exon

XP_023825867.1
type: Protein
SIO_000068: ncbiprotein

position:3071345:-1
position: 3071345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3087172:-1
position: 3087172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3087021-3087172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3086247-3086381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3081583-3081719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3079042-3079184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3078822-3078907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3078636-3078708:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3078322-3078475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3075881-3075983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075222-3075356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3074812-3074950:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3074654-3074722:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3071345-3071434:-1:exon

LOC111951847
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of fused homolog isoform X1
translation: MDEVRPINGPAAAPGLASIFPPGLQAIYGECRRLYPDQANPLQVTAIVKYWLGGPDPLDYISMYRNVGCAAQDVQEHWHYISFGLSDLYGDNRVHEFTGQEGPSGFGFELTFRLKREVGETAPPTWPAELMQGLARYVFQSENTFCSGDHISWHSPLDNSESRIQHMLLTEDPQISPVHTPFGLVNFLQIVGVCTEELQAAQQWNGQGILELLRGVHVAGGPWLITDMRRGETMFDIDPHLQQERVDQGIETEGSNLSGVSAKCVWDDLSRPSEDEEDSRSICIGSQPRRLSEKDTEQIREALRKGLEFNTKAALPPINSQKQGHDRPQSRKDSLESESSAAIVPHELVRTRQLESVHLKFNQESGTLLPLCLRGRLLHGRHFTYKSINGDTAITFVSTGVEGAFATEEHPYAAHGPWLQILLTEEFVEQMLGDLSELNTREETKLPKEYSWPEKNLKISVLPDSVFDNPLQ
SIO_010081: LOC111951847
subclass of: SO_0000673
so part of: LOC111951847
location: complement(join(3071345..3071434,3074654..3074722,3074812..3074950,3075222..3075356,3075881..3075983,3078322..3078478,3078636..3078708,3078822..3078907,3079042..3079184,3081583..3081719,3086247..3086381,3087021..3087172))
location: region:3071345-3087172:-1
so has part: feature:3087021-3087172:-1:exon
so has part: feature:3086247-3086381:-1:exon
so has part: feature:3081583-3081719:-1:exon
so has part: feature:3079042-3079184:-1:exon
so has part: feature:3078822-3078907:-1:exon
so has part: feature:3078636-3078708:-1:exon
so has part: feature:3078322-3078478:-1:exon
so has part: feature:3075881-3075983:-1:exon
so has part: feature:3075222-3075356:-1:exon
so has part: feature:3074812-3074950:-1:exon
so has part: feature:3074654-3074722:-1:exon
so has part: feature:3071345-3071434:-1:exon

XP_023825866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3087021-3087172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3086247-3086381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3081583-3081719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3079042-3079184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3078822-3078907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3078636-3078708:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3078322-3078478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3075881-3075983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075222-3075356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3074812-3074950:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3074654-3074722:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3071345-3071434:-1:exon

LOC111951673
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3113837..3116983)
location: region:3113837-3116983:-1
so has part: feature:3113837-3116983:-1:exon

111951673
type: Gene
SIO_000068: ncbigene

position:3113837:-1
position: 3113837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116983:-1
position: 3116983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113837-3116983:-1:exon

LOC111951673
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951673
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC111951673
subclass of: SO_0000673
so part of: LOC111951673
location: complement(3113837..3114099)
location: region:3113837-3114099:-1
so has part: feature:3113837-3114099:-1:exon

position:3114099:-1
position: 3114099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113837-3114099:-1:exon

LOC111951673
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951673
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC111951673
subclass of: SO_0000673
so part of: LOC111951673
location: complement(3114582..3114748)
location: region:3114582-3114748:-1
so has part: feature:3114582-3114748:-1:exon

position:3114582:-1
position: 3114582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3114748:-1
position: 3114748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114582-3114748:-1:exon

LOC111951673
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951673
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC111951673
subclass of: SO_0000673
so part of: LOC111951673
location: complement(3114840..3115088)
location: region:3114840-3115088:-1
so has part: feature:3114840-3115088:-1:exon

position:3114840:-1
position: 3114840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3115088:-1
position: 3115088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114840-3115088:-1:exon

LOC111951673
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951673
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC111951673
subclass of: SO_0000673
so part of: LOC111951673
location: complement(3116953..3116983)
location: region:3116953-3116983:-1
so has part: feature:3116953-3116983:-1:exon

position:3116953:-1
position: 3116953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3116953-3116983:-1:exon

LOC111952055
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111952055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3132638..3154379
location: region:3132638-3154379:1
so has part: feature:3132638-3154379:1:exon
subclass of: SO_0000010

111952055
type: Gene
SIO_000068: ncbigene

position:3132638:1
position: 3132638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3154379:1
position: 3154379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3132638-3154379:1:exon

LOC111952055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952055
product: palmitoyltransferase ZDHHC16A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023970502.1
SIO_010081: LOC111952055
subclass of: SO_0000673
so part of: LOC111952055
location: join(3132638..3133011,3144711..3144963,3145192..3145386,3150790..3150878,3151065..3151093,3151310..3151452,3151951..3152030,3152212..3152335,3152443..3152513,3152672..3154379)
location: region:3132638-3154379:1
so has part: feature:3132638-3133011:1:exon
so has part: feature:3144711-3144963:1:exon
so has part: feature:3145192-3145386:1:exon
so has part: feature:3150790-3150878:1:exon
so has part: feature:3151065-3151093:1:exon
so has part: feature:3151310-3151452:1:exon
so has part: feature:3151951-3152030:1:exon
so has part: feature:3152212-3152335:1:exon
so has part: feature:3152443-3152513:1:exon
so has part: feature:3152672-3154379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3132638-3133011:1:exon

position:3133011:1
position: 3133011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3144711-3144963:1:exon

position:3144711:1
position: 3144711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144963:1
position: 3144963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3145192-3145386:1:exon

position:3145192:1
position: 3145192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145386:1
position: 3145386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3150790-3150878:1:exon

position:3150790:1
position: 3150790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150878:1
position: 3150878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3151065-3151093:1:exon

position:3151065:1
position: 3151065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3151093:1
position: 3151093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3151310-3151452:1:exon

position:3151310:1
position: 3151310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3151452:1
position: 3151452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3151951-3152030:1:exon

position:3151951:1
position: 3151951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152030:1
position: 3152030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3152212-3152335:1:exon

position:3152212:1
position: 3152212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152335:1
position: 3152335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3152443-3152513:1:exon

position:3152443:1
position: 3152443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152513:1
position: 3152513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3152672-3154379:1:exon

position:3152672:1
position: 3152672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111952055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952055
product: palmitoyltransferase ZDHHC16A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_023970503.1
SIO_010081: LOC111952055
subclass of: SO_0000673
so part of: LOC111952055
location: join(3132638..3133011,3144711..3144963,3145192..3145386,3150790..3150878,3151065..3151093,3151985..3152030,3152212..3152335,3152443..3152513,3152672..3154379)
location: region:3132638-3154379:1
so has part: feature:3132638-3133011:1:exon
so has part: feature:3144711-3144963:1:exon
so has part: feature:3145192-3145386:1:exon
so has part: feature:3150790-3150878:1:exon
so has part: feature:3151065-3151093:1:exon
so has part: feature:3151985-3152030:1:exon
so has part: feature:3152212-3152335:1:exon
so has part: feature:3152443-3152513:1:exon
so has part: feature:3152672-3154379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3132638-3133011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144711-3144963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3145192-3145386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3150790-3150878:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3151065-3151093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3151985-3152030:1:exon

position:3151985:1
position: 3151985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3152212-3152335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3152443-3152513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3152672-3154379:1:exon

LOC111952055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC16A isoform X1
translation: MRLCSTFLLQRWLWLCVCARQWHCSNGNNRRLPLCVRQIWAYLRLMVDSLYYNTLTNSEVVMESLMEPILWMVDLFTRRFGAVFVCLLVILTTSILLVVYVVMLPVIFDTYSPSWIAWHMTYGHWNLVMIVFHYYKATNTAPGYPPKMKNSLPFVSMCKKCIIPKPARTHHCVICNTCILKMDHHCPWLNNCVGHFNQRYFFCFCVSLTLGCIYCSISGRNLFLDAYRAHSAIESTNQTPPLTFRDEMFHKSIIYMWVLTSVVAVVLGGLTIWHAVLISRGETSIERHLNSKETKRMRRRGKVYKNSFNYGGLNNWKVFLGVEKKSHWLTRVIMPSGHVPIGNGLTWDIYPFRKDMMPV
SIO_010081: LOC111952055
subclass of: SO_0000673
so part of: LOC111952055
location: join(3144718..3144963,3145192..3145386,3150790..3150878,3151065..3151093,3151310..3151452,3151951..3152030,3152212..3152335,3152443..3152513,3152672..3152774)
location: region:3144718-3152774:1
so has part: feature:3144718-3144963:1:exon
so has part: feature:3145192-3145386:1:exon
so has part: feature:3150790-3150878:1:exon
so has part: feature:3151065-3151093:1:exon
so has part: feature:3151310-3151452:1:exon
so has part: feature:3151951-3152030:1:exon
so has part: feature:3152212-3152335:1:exon
so has part: feature:3152443-3152513:1:exon
so has part: feature:3152672-3152774:1:exon

XP_023826270.1
type: Protein
SIO_000068: ncbiprotein

position:3144718:1
position: 3144718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152774:1
position: 3152774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3144718-3144963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3145192-3145386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3150790-3150878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3151065-3151093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3151310-3151452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3151951-3152030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3152212-3152335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3152443-3152513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3152672-3152774:1:exon

LOC111952055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC16A isoform X2
translation: MRLCSTFLLQRWLWLCVCARQWHCSNGNNRRLPLCVRQIWAYLRLMVDSLYYNTLTNSEVVMESLMEPILWMVDLFTRRFGAVFVCLLVILTTSILLVVYVVMLPVIFDTYSPSWIAWHMTYGHWNLVMIVFHYYKATNTAPGYPPKMKNSLPFVSMCKKCIIPKPARTHHCVICNTCILKMDHHCHEMFHKSIIYMWVLTSVVAVVLGGLTIWHAVLISRGETSIERHLNSKETKRMRRRGKVYKNSFNYGGLNNWKVFLGVEKKSHWLTRVIMPSGHVPIGNGLTWDIYPFRKDMMPV
SIO_010081: LOC111952055
subclass of: SO_0000673
so part of: LOC111952055
location: join(3144718..3144963,3145192..3145386,3150790..3150878,3151065..3151093,3151985..3152030,3152212..3152335,3152443..3152513,3152672..3152774)
location: region:3144718-3152774:1
so has part: feature:3144718-3144963:1:exon
so has part: feature:3145192-3145386:1:exon
so has part: feature:3150790-3150878:1:exon
so has part: feature:3151065-3151093:1:exon
so has part: feature:3151985-3152030:1:exon
so has part: feature:3152212-3152335:1:exon
so has part: feature:3152443-3152513:1:exon
so has part: feature:3152672-3152774:1:exon

XP_023826271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3144718-3144963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3145192-3145386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3150790-3150878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3151065-3151093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3151985-3152030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3152212-3152335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3152443-3152513:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3152672-3152774:1:exon

LOC111951674
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3184634..3212649
location: region:3184634-3212649:1
so has part: feature:3184634-3212649:1:exon
subclass of: SO_0000010

111951674
type: Gene
SIO_000068: ncbigene

position:3184634:1
position: 3184634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3212649:1
position: 3212649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3184634-3212649:1:exon

LOC111951674
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951674
product: ubiquitin domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023969886.1
SIO_010081: LOC111951674
subclass of: SO_0000673
so part of: LOC111951674
location: join(3184634..3184706,3191198..3191425,3210182..3210367,3211542..3212649)
location: region:3184634-3212649:1
so has part: feature:3184634-3184706:1:exon
so has part: feature:3191198-3191425:1:exon
so has part: feature:3210182-3210367:1:exon
so has part: feature:3211542-3212649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3184634-3184706:1:exon

position:3184706:1
position: 3184706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3191198-3191425:1:exon

position:3191198:1
position: 3191198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3191425:1
position: 3191425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3210182-3210367:1:exon

position:3210182:1
position: 3210182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3210367:1
position: 3210367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3211542-3212649:1:exon

position:3211542:1
position: 3211542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951674
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin domain-containing protein 1-like
translation: MGVANSRDHRLYHPSQSPIKVVLKRRNEPLKKERLKWKNEYPMTEGQLRSKRDEFWDTAPAFDGRKEIWDALRAAAVAVELNDLEMAQAIVDGACITLPHGTLTESYDELGNRYQLPAYTLTPPANLITERANDNEAPNQKEQKKPPAFPKEEFQLRVRLSCGKDLRISASMSDSISQLKTVLEGQEDIEVAHQRWFFAGKLLTDKIRLQDTKIQKDFVVQVIVNNYSPVTKLMPN
SIO_010081: LOC111951674
subclass of: SO_0000673
so part of: LOC111951674
location: join(3184634..3184706,3191198..3191425,3210182..3210367,3211542..3211765)
location: region:3184634-3211765:1
so has part: feature:3184634-3184706:1:exon
so has part: feature:3191198-3191425:1:exon
so has part: feature:3210182-3210367:1:exon
so has part: feature:3211542-3211765:1:exon

XP_023825654.1
type: Protein
SIO_000068: ncbiprotein

position:3211765:1
position: 3211765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3184634-3184706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191198-3191425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3210182-3210367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3211542-3211765:1:exon

LOC111951676
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3211772..3222448
location: region:3211772-3222448:1
so has part: feature:3211772-3222448:1:exon
subclass of: SO_0000010

111951676
type: Gene
SIO_000068: ncbigene

position:3211772:1
position: 3211772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3222448:1
position: 3222448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3211772-3222448:1:exon

LOC111951676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951676
product: ubiquitin domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023969887.1
SIO_010081: LOC111951676
subclass of: SO_0000673
so part of: LOC111951676
location: join(3211772..3211799,3219981..3220166,3221341..3222448)
location: region:3211772-3222448:1
so has part: feature:3211772-3211799:1:exon
so has part: feature:3219981-3220166:1:exon
so has part: feature:3221341-3222448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3211772-3211799:1:exon

position:3211799:1
position: 3211799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3219981-3220166:1:exon

position:3219981:1
position: 3219981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3220166:1
position: 3220166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3221341-3222448:1:exon

position:3221341:1
position: 3221341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin domain-containing protein 1-like
translation: MEKEKDGWESTLTESYDELGNRYQLPAYTLTPPANLITERANDNEAPNQKEQKKPPAFPKEEFQLRVRLSCGKDLRISASMSDSISQLKTVLEGQEDIEVAHQRWFFAGKLLTDKIRLQDTKIQKDFVVQVIVNNYSPVTKLMPN
SIO_010081: LOC111951676
subclass of: SO_0000673
so part of: LOC111951676
location: join(3211772..3211799,3219981..3220166,3221341..3221564)
location: region:3211772-3221564:1
so has part: feature:3211772-3211799:1:exon
so has part: feature:3219981-3220166:1:exon
so has part: feature:3221341-3221564:1:exon

XP_023825655.1
type: Protein
SIO_000068: ncbiprotein

position:3221564:1
position: 3221564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3211772-3211799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3219981-3220166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3221341-3221564:1:exon

rrp12
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: rrp12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3227732..3248756
location: region:3227732-3248756:1
so has part: feature:3227732-3248756:1:exon
subclass of: SO_0000010

111951823
type: Gene
SIO_000068: ncbigene

position:3227732:1
position: 3227732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248756:1
position: 3248756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3227732-3248756:1:exon

rrp12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: rrp12
product: ribosomal RNA processing 12 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_023970062.1
SIO_010081: rrp12
subclass of: SO_0000673
so part of: rrp12
location: join(3227732..3227952,3229651..3229874,3231692..3231775,3232020..3232096,3232773..3232878,3232959..3233075,3233171..3233309,3233572..3233699,3233812..3233910,3234048..3234139,3234255..3234366,3234444..3234544,3235609..3235723,3235846..3235988,3236125..3236246,3236326..3236390,3239228..3239390,3239635..3239789,3240072..3240139,3240300..3240393,3240586..3240744,3240842..3240922,3241002..3241107,3241212..3241319,3241656..3241813,3241924..3242015,3245106..3245261,3245366..3245538,3245962..3246072,3246467..3246516,3248032..3248110,3248219..3248286,3248395..3248477,3248575..3248756)
location: region:3227732-3248756:1
so has part: feature:3227732-3227952:1:exon
so has part: feature:3229651-3229874:1:exon
so has part: feature:3231692-3231775:1:exon
so has part: feature:3232020-3232096:1:exon
so has part: feature:3232773-3232878:1:exon
so has part: feature:3232959-3233075:1:exon
so has part: feature:3233171-3233309:1:exon
so has part: feature:3233572-3233699:1:exon
so has part: feature:3233812-3233910:1:exon
so has part: feature:3234048-3234139:1:exon
so has part: feature:3234255-3234366:1:exon
so has part: feature:3234444-3234544:1:exon
so has part: feature:3235609-3235723:1:exon
so has part: feature:3235846-3235988:1:exon
so has part: feature:3236125-3236246:1:exon
so has part: feature:3236326-3236390:1:exon
so has part: feature:3239228-3239390:1:exon
so has part: feature:3239635-3239789:1:exon
so has part: feature:3240072-3240139:1:exon
so has part: feature:3240300-3240393:1:exon
so has part: feature:3240586-3240744:1:exon
so has part: feature:3240842-3240922:1:exon
so has part: feature:3241002-3241107:1:exon
so has part: feature:3241212-3241319:1:exon
so has part: feature:3241656-3241813:1:exon
so has part: feature:3241924-3242015:1:exon
so has part: feature:3245106-3245261:1:exon
so has part: feature:3245366-3245538:1:exon
so has part: feature:3245962-3246072:1:exon
so has part: feature:3246467-3246516:1:exon
so has part: feature:3248032-3248110:1:exon
so has part: feature:3248219-3248286:1:exon
so has part: feature:3248395-3248477:1:exon
so has part: feature:3248575-3248756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3227732-3227952:1:exon

position:3227952:1
position: 3227952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3229651-3229874:1:exon

position:3229651:1
position: 3229651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3229874:1
position: 3229874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3231692-3231775:1:exon

position:3231692:1
position: 3231692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231775:1
position: 3231775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3232020-3232096:1:exon

position:3232020:1
position: 3232020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3232096:1
position: 3232096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3232773-3232878:1:exon

position:3232773:1
position: 3232773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3232878:1
position: 3232878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3232959-3233075:1:exon

position:3232959:1
position: 3232959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233075:1
position: 3233075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3233171-3233309:1:exon

position:3233171:1
position: 3233171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233309:1
position: 3233309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3233572-3233699:1:exon

position:3233572:1
position: 3233572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233699:1
position: 3233699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3233812-3233910:1:exon

position:3233812:1
position: 3233812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233910:1
position: 3233910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3234048-3234139:1:exon

position:3234048:1
position: 3234048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3234139:1
position: 3234139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3234255-3234366:1:exon

position:3234255:1
position: 3234255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3234366:1
position: 3234366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3234444-3234544:1:exon

position:3234444:1
position: 3234444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3234544:1
position: 3234544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3235609-3235723:1:exon

position:3235609:1
position: 3235609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235723:1
position: 3235723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3235846-3235988:1:exon

position:3235846:1
position: 3235846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235988:1
position: 3235988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3236125-3236246:1:exon

position:3236125:1
position: 3236125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3236246:1
position: 3236246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3236326-3236390:1:exon

position:3236326:1
position: 3236326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3236390:1
position: 3236390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3239228-3239390:1:exon

position:3239228:1
position: 3239228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3239390:1
position: 3239390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3239635-3239789:1:exon

position:3239635:1
position: 3239635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3239789:1
position: 3239789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3240072-3240139:1:exon

position:3240072:1
position: 3240072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3240139:1
position: 3240139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3240300-3240393:1:exon

position:3240300:1
position: 3240300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3240393:1
position: 3240393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3240586-3240744:1:exon

position:3240586:1
position: 3240586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3240744:1
position: 3240744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3240842-3240922:1:exon

position:3240842:1
position: 3240842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3240922:1
position: 3240922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3241002-3241107:1:exon

position:3241002:1
position: 3241002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3241107:1
position: 3241107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3241212-3241319:1:exon

position:3241212:1
position: 3241212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3241319:1
position: 3241319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3241656-3241813:1:exon

position:3241656:1
position: 3241656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3241813:1
position: 3241813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3241924-3242015:1:exon

position:3241924:1
position: 3241924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3242015:1
position: 3242015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3245106-3245261:1:exon

position:3245106:1
position: 3245106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3245261:1
position: 3245261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3245366-3245538:1:exon

position:3245366:1
position: 3245366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3245538:1
position: 3245538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3245962-3246072:1:exon

position:3245962:1
position: 3245962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246072:1
position: 3246072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3246467-3246516:1:exon

position:3246467:1
position: 3246467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246516:1
position: 3246516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3248032-3248110:1:exon

position:3248032:1
position: 3248032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248110:1
position: 3248110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3248219-3248286:1:exon

position:3248219:1
position: 3248219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248286:1
position: 3248286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3248395-3248477:1:exon

position:3248395:1
position: 3248395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248477:1
position: 3248477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3248575-3248756:1:exon

position:3248575:1
position: 3248575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rrp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: rrp12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RRP12-like protein
translation: MVKSGKLKSGAASKLKRWKKGHSSDSNPQTNRFRQAAKSRFFSRPSEKSDLTVDALKLHNELQAGALERGDRGDACMEETAEQALSERSAGTFLSGLSDCSNLTFRKVQRFWESNSAAHKEICAVLAAVTEVIRSHGGKETETEYFAALMTTLEAVDSGESLAAVAYLLNLVMKRVPAPVLISKFSDTAKALMDVMSTLASSESASALRWILSCLSTLLRKQDVTVWSYPSTLQTYHGLLSFTVHSKPKIRKAAQHGLCSILRGSDLLFTDNAPTHHPAAAMAAKFCIKEIEQAGGSKEDTTTLHVLGLLKDLMVTFPLNAVKSCCETLLRVMTLSHVLVTACAMQAFHKLFSGKPNPATLSAELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLASVQSSLSLGHLPRLFSTAMSCLLSPHTQVVSAATNTLKTLLSECVAPHMEEIGPVSLTASSGNPSYVCKMFRIVEEGLSYRFHASWPFVLQLLGCFYRAAGKRTHPVMTKSLQSLADLRATPRFPFCGELDLAVGGAVESMGPEVLLNAVPLNITGLEDNLEFPRSWLIPVIRDHVKNTHLAYYTSYLLPLAATLRQRAEELEKAGQKLEAKVYKTLQLQIWTMLPGFCVGPLDLLVSFKGVARALGMAINERPDLRLTICQAIRTLITKSCNTDEEKAEVGRFAKNFLPILFNVFSQQPAPGDSAPYRMAVLDTIKVYLTVTDPQMVCTFLSKATERLSSPDSTEFIRMSVMDLMVAMAPCVDEVTMSQTFELIRPYLENKEPHMQKKAYRVLEEMCGGEREECRSFVLSHLETLKHVLLGTLKTASSPAKRPRLKCLIHIVKQLSDEHRDFITALLPEVIICTKEVSVGARKNAYTLLVEIGSAFIRFCGDAKEALEQYLLLVYVGLTGSVTMITCTVLALTRLVFEYKDSIDMGSMEHLLHNVCLLLTSQTREIVKAALSFVKVILFVMDPTTLAGHVTVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFELVKSKLPVEHHKVLVNIRKAEARTKRSRXADEDHDDSDSGDDKPKARGESIEEILAESDSDMSDDERPKGAKTQKKPTKQKGRAWLKEGQGDEPLNFLDPTVSQRVLATNPDMKKRAKVQHSFKVTSDGRLIIREDNDEGVKTKDDEGEMKDILEEAGVKSIKTKKRRFQDGHYDDDMEIEPQLKYKAGGSGIHRPLGGSRDLGGDYXAKKGKGDVKRKGKVDPYAYIPLRKAQLNRRKKAKMQGQFKGMVRGAKKGAQSGKRMQRNKRAA
SIO_010081: rrp12
subclass of: SO_0000673
so part of: rrp12
location: join(3227814..3227952,3229651..3229874,3231692..3231775,3232020..3232096,3232773..3232878,3232959..3233075,3233171..3233309,3233572..3233699,3233812..3233910,3234048..3234139,3234255..3234366,3234444..3234544,3235609..3235723,3235846..3235988,3236125..3236246,3236326..3236390,3239228..3239390,3239635..3239789,3240072..3240139,3240300..3240393,3240586..3240744,3240842..3240922,3241002..3241107,3241212..3241319,3241656..3241813,3241924..3242015,3245106..3245261,3245366..3245538,3245962..3246072,3246467..3246516,3248032..3248110,3248219..3248286,3248395..3248477,3248575..3248677)
location: region:3227814-3248677:1
so has part: feature:3227814-3227952:1:exon
so has part: feature:3229651-3229874:1:exon
so has part: feature:3231692-3231775:1:exon
so has part: feature:3232020-3232096:1:exon
so has part: feature:3232773-3232878:1:exon
so has part: feature:3232959-3233075:1:exon
so has part: feature:3233171-3233309:1:exon
so has part: feature:3233572-3233699:1:exon
so has part: feature:3233812-3233910:1:exon
so has part: feature:3234048-3234139:1:exon
so has part: feature:3234255-3234366:1:exon
so has part: feature:3234444-3234544:1:exon
so has part: feature:3235609-3235723:1:exon
so has part: feature:3235846-3235988:1:exon
so has part: feature:3236125-3236246:1:exon
so has part: feature:3236326-3236390:1:exon
so has part: feature:3239228-3239390:1:exon
so has part: feature:3239635-3239789:1:exon
so has part: feature:3240072-3240139:1:exon
so has part: feature:3240300-3240393:1:exon
so has part: feature:3240586-3240744:1:exon
so has part: feature:3240842-3240922:1:exon
so has part: feature:3241002-3241107:1:exon
so has part: feature:3241212-3241319:1:exon
so has part: feature:3241656-3241813:1:exon
so has part: feature:3241924-3242015:1:exon
so has part: feature:3245106-3245261:1:exon
so has part: feature:3245366-3245538:1:exon
so has part: feature:3245962-3246072:1:exon
so has part: feature:3246467-3246516:1:exon
so has part: feature:3248032-3248110:1:exon
so has part: feature:3248219-3248286:1:exon
so has part: feature:3248395-3248477:1:exon
so has part: feature:3248575-3248677:1:exon

XP_023825830.1
type: Protein
SIO_000068: ncbiprotein

position:3227814:1
position: 3227814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248677:1
position: 3248677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3227814-3227952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3229651-3229874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3231692-3231775:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3232020-3232096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3232773-3232878:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232959-3233075:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3233171-3233309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3233572-3233699:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3233812-3233910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3234048-3234139:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3234255-3234366:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3234444-3234544:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3235609-3235723:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3235846-3235988:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3236125-3236246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3236326-3236390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3239228-3239390:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3239635-3239789:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3240072-3240139:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3240300-3240393:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3240586-3240744:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3240842-3240922:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3241002-3241107:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3241212-3241319:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3241656-3241813:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3241924-3242015:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3245106-3245261:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3245366-3245538:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3245962-3246072:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3246467-3246516:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3248032-3248110:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3248219-3248286:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3248395-3248477:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3248575-3248677:1:exon

LOC111951893
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3251210..3311166)
location: region:3251210-3311166:-1
so has part: feature:3251210-3311166:-1:exon

111951893
type: Gene
SIO_000068: ncbigene

position:3251210:-1
position: 3251210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3311166:-1
position: 3311166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3251210-3311166:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3251210..3252060)
location: region:3251210-3252060:-1
so has part: feature:3251210-3252060:-1:exon

position:3252060:-1
position: 3252060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3251210-3252060:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3269704..3269784)
location: region:3269704-3269784:-1
so has part: feature:3269704-3269784:-1:exon

position:3269704:-1
position: 3269704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3269784:-1
position: 3269784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3269704-3269784:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3277381..3277550)
location: region:3277381-3277550:-1
so has part: feature:3277381-3277550:-1:exon

position:3277381:-1
position: 3277381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3277550:-1
position: 3277550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3277381-3277550:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3277851..3277949)
location: region:3277851-3277949:-1
so has part: feature:3277851-3277949:-1:exon

position:3277851:-1
position: 3277851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3277949:-1
position: 3277949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3277851-3277949:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3278172..3278210)
location: region:3278172-3278210:-1
so has part: feature:3278172-3278210:-1:exon

position:3278172:-1
position: 3278172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278210:-1
position: 3278210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3278172-3278210:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3278366..3278461)
location: region:3278366-3278461:-1
so has part: feature:3278366-3278461:-1:exon

position:3278366:-1
position: 3278366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278461:-1
position: 3278461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3278366-3278461:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3279481..3279559)
location: region:3279481-3279559:-1
so has part: feature:3279481-3279559:-1:exon

position:3279481:-1
position: 3279481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3279559:-1
position: 3279559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3279481-3279559:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3294415..3294484)
location: region:3294415-3294484:-1
so has part: feature:3294415-3294484:-1:exon

position:3294415:-1
position: 3294415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3294484:-1
position: 3294484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3294415-3294484:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3295920..3296018)
location: region:3295920-3296018:-1
so has part: feature:3295920-3296018:-1:exon

position:3295920:-1
position: 3295920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3296018:-1
position: 3296018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3295920-3296018:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3304552..3304612)
location: region:3304552-3304612:-1
so has part: feature:3304552-3304612:-1:exon

position:3304552:-1
position: 3304552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3304612:-1
position: 3304612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3304552-3304612:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3304806..3304886)
location: region:3304806-3304886:-1
so has part: feature:3304806-3304886:-1:exon

position:3304806:-1
position: 3304806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3304886:-1
position: 3304886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3304806-3304886:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3305078..3305146)
location: region:3305078-3305146:-1
so has part: feature:3305078-3305146:-1:exon

position:3305078:-1
position: 3305078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3305146:-1
position: 3305146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3305078-3305146:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3305947..3306020)
location: region:3305947-3306020:-1
so has part: feature:3305947-3306020:-1:exon

position:3305947:-1
position: 3305947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306020:-1
position: 3306020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3305947-3306020:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3306166..3306196)
location: region:3306166-3306196:-1
so has part: feature:3306166-3306196:-1:exon

position:3306166:-1
position: 3306166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306196:-1
position: 3306196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3306166-3306196:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3306302..3306383)
location: region:3306302-3306383:-1
so has part: feature:3306302-3306383:-1:exon

position:3306302:-1
position: 3306302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306383:-1
position: 3306383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3306302-3306383:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3306559..3306630)
location: region:3306559-3306630:-1
so has part: feature:3306559-3306630:-1:exon

position:3306559:-1
position: 3306559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306630:-1
position: 3306630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3306559-3306630:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3306790..3306861)
location: region:3306790-3306861:-1
so has part: feature:3306790-3306861:-1:exon

position:3306790:-1
position: 3306790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306861:-1
position: 3306861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3306790-3306861:-1:exon

LOC111951893
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111951893
subclass of: SO_0000673
so part of: LOC111951893
location: complement(3310485..3311166)
location: region:3310485-3311166:-1
so has part: feature:3310485-3311166:-1:exon

position:3310485:-1
position: 3310485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3310485-3311166:-1:exon

LOC111951589
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3312858..3317439
location: region:3312858-3317439:1
so has part: feature:3312858-3317439:1:exon
subclass of: SO_0000010

111951589
type: Gene
SIO_000068: ncbigene

position:3312858:1
position: 3312858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3317439:1
position: 3317439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3312858-3317439:1:exon

LOC111951589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951589
product: PR domain zinc finger protein 8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_023969755.1
SIO_010081: LOC111951589
subclass of: SO_0000673
so part of: LOC111951589
location: join(3312858..3313216,3314388..3314610,3315002..3315233,3315562..3317439)
location: region:3312858-3317439:1
so has part: feature:3312858-3313216:1:exon
so has part: feature:3314388-3314610:1:exon
so has part: feature:3315002-3315233:1:exon
so has part: feature:3315562-3317439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3312858-3313216:1:exon

position:3313216:1
position: 3313216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3314388-3314610:1:exon

position:3314388:1
position: 3314388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3314610:1
position: 3314610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3315002-3315233:1:exon

position:3315002:1
position: 3315002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3315233:1
position: 3315233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3315562-3317439:1:exon

position:3315562:1
position: 3315562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 8-like
translation: MDHSFLSRSLWNSEGKFLQHHATDLYTSVHVTRNIPAGAQFGPCILQNTFYDTIAFIALKSRDKRSKSYVFRVDPEAMRSSALVLSWLRLVQAACGREEQNTEAFLKGGQLYFRTTRDIRQEEELLVWYDQELSHLLGFTDISTRGQNEELKCATCNQVFKNEHPYLAHCRFLCAQVKYDALSREAYEHKHMEIKRQRRVTDFHNIARDLEHKRYGASEDAEISPRKWKHEETGYPRWRKPVLLEKTNISNNNNITQVTRDDHLTAPESTGSALKLKAEKYQLKKDHVECKNSAFTEVGAAKMSFTHEKEKPTEADSETVREMSADFNANSNSSAFSFVLRSGAEEQKSAFCKPCKRTSNGSTAHPSNTLPAPLNRLEEVRDVFTAKTVLGYNNLLATNMLNGDLPRAQTLPTPVNGNAFPYAPEHWSRSIGDQLQTTSSLTILPPTFTSIGVSVQNWCAKCNLSFRMTSDLVLHMRSHHKKEFAAESQVRRRREEKLTCPICHEFFRERHHLSRHMTSHN
SIO_010081: LOC111951589
subclass of: SO_0000673
so part of: LOC111951589
location: join(3314395..3314610,3315002..3315233,3315562..3316679)
location: region:3314395-3316679:1
so has part: feature:3314395-3314610:1:exon
so has part: feature:3315002-3315233:1:exon
so has part: feature:3315562-3316679:1:exon

XP_023825523.1
type: Protein
SIO_000068: ncbiprotein

position:3314395:1
position: 3314395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3316679:1
position: 3316679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3314395-3314610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3315002-3315233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3315562-3316679:1:exon

LOC111951677
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3325801..3327615)
location: region:3325801-3327615:-1
so has part: feature:3325801-3327615:-1:exon

111951677
type: Gene
SIO_000068: ncbigene

position:3325801:-1
position: 3325801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3327615:-1
position: 3327615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3325801-3327615:-1:exon

LOC111951677
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951677
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111951677
subclass of: SO_0000673
so part of: LOC111951677
location: complement(3325801..3325974)
location: region:3325801-3325974:-1
so has part: feature:3325801-3325974:-1:exon

position:3325974:-1
position: 3325974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3325801-3325974:-1:exon

LOC111951677
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951677
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111951677
subclass of: SO_0000673
so part of: LOC111951677
location: complement(3326085..3326191)
location: region:3326085-3326191:-1
so has part: feature:3326085-3326191:-1:exon

position:3326085:-1
position: 3326085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3326191:-1
position: 3326191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3326085-3326191:-1:exon

LOC111951677
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951677
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111951677
subclass of: SO_0000673
so part of: LOC111951677
location: complement(3326528..3326595)
location: region:3326528-3326595:-1
so has part: feature:3326528-3326595:-1:exon

position:3326528:-1
position: 3326528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3326595:-1
position: 3326595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3326528-3326595:-1:exon

LOC111951677
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951677
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111951677
subclass of: SO_0000673
so part of: LOC111951677
location: complement(3327003..3327074)
location: region:3327003-3327074:-1
so has part: feature:3327003-3327074:-1:exon

position:3327003:-1
position: 3327003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3327074:-1
position: 3327074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3327003-3327074:-1:exon

LOC111951677
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951677
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111951677
subclass of: SO_0000673
so part of: LOC111951677
location: complement(3327125..3327290)
location: region:3327125-3327290:-1
so has part: feature:3327125-3327290:-1:exon

position:3327125:-1
position: 3327125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3327290:-1
position: 3327290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3327125-3327290:-1:exon

LOC111951677
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951677
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111951677
subclass of: SO_0000673
so part of: LOC111951677
location: complement(3327333..3327371)
location: region:3327333-3327371:-1
so has part: feature:3327333-3327371:-1:exon

position:3327333:-1
position: 3327333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3327371:-1
position: 3327371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3327333-3327371:-1:exon

LOC111951677
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111951677
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111951677
subclass of: SO_0000673
so part of: LOC111951677
location: complement(3327610..3327615)
location: region:3327610-3327615:-1
so has part: feature:3327610-3327615:-1:exon

position:3327610:-1
position: 3327610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3327610-3327615:-1:exon

LOC111951640
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3342170..3354973)
location: region:3342170-3354973:-1
so has part: feature:3342170-3354973:-1:exon
subclass of: SO_0000010

111951640
type: Gene
SIO_000068: ncbigene

position:3342170:-1
position: 3342170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3354973:-1
position: 3354973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3342170-3354973:-1:exon

LOC111951640
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951640
product: growth/differentiation factor 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023969847.1
SIO_010081: LOC111951640
subclass of: SO_0000673
so part of: LOC111951640
location: complement(join(3342170..3342932,3343776..3344887,3354462..3354973))
location: region:3342170-3354973:-1
so has part: feature:3354462-3354973:-1:exon
so has part: feature:3343776-3344887:-1:exon
so has part: feature:3342170-3342932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3354462-3354973:-1:exon

position:3354462:-1
position: 3354462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3343776-3344887:-1:exon

position:3343776:-1
position: 3343776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3344887:-1
position: 3344887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3342170-3342932:-1:exon

position:3342932:-1
position: 3342932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 10-like
translation: MFGSEMAVWFEFTAHMLFLTLGCXLGALEGRTSSRTPWGLQGQGSDGTDSPFDRDRANQDVVSQHMYRLYEKYNRDLKRLREGNTVRSFRASQDSSDQRTFYHLNLTSLQDSERILSATFHFLFDRCPRPRAWFSKRYKIPACRSLHLHPAPSIHLFLHSSPSGSGFNPRSQVSLLGNVTFHPNQRGLWQTQDVTVAIKEAREKGSHLVSVELDFGLQYHRQPEDTLSGASLPYLLMYADDHALDEPNSVAQTLQRYGPEAEVKENTSRPSLLPPKQGSKGRVRRGVPSRPDSIQNNELPEVEYRPSGSRKEYLFETAYRTLKPINPKPGRKDRTRNGQGXEEEVKDGERDRGSQSPVLSLDERTPTTSSDGGSRLQDNSEGRSDGRNDRGKAGGSKSPMLSFDEWTMRKAKKRQRGSEAQIRSCSRRTLRVDFADIGWSEWVLAPKAFDAYYCAGACGFPMPKVLHPSNHATIQSIVRAVGIVPGVPEPCCVPEKMSPLVVLYQDEGVNLVLKVYPSMSVESCACR
SIO_010081: LOC111951640
subclass of: SO_0000673
so part of: LOC111951640
location: complement(join(3342741..3342932,3343776..3344887,3354462..3354741))
location: region:3342741-3354741:-1
so has part: feature:3354462-3354741:-1:exon
so has part: feature:3343776-3344887:-1:exon
so has part: feature:3342741-3342932:-1:exon

XP_023825615.1
type: Protein
SIO_000068: ncbiprotein

position:3342741:-1
position: 3342741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3354741:-1
position: 3354741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3354462-3354741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3343776-3344887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3342741-3342932:-1:exon

LOC111952089
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111952089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3514138..3572917)
location: region:3514138-3572917:-1
so has part: feature:3514138-3572917:-1:exon
subclass of: SO_0000010

111952089
type: Gene
SIO_000068: ncbigene

position:3514138:-1
position: 3514138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3572917:-1
position: 3572917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3514138-3572917:-1:exon

LOC111952089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952089
product: tyrosine-protein phosphatase non-receptor type 20-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023970575.1
SIO_010081: LOC111952089
subclass of: SO_0000673
so part of: LOC111952089
location: complement(join(3514138..3515453,3516025..3516087,3518406..3518621,3518970..3519147,3519421..3519577,3521455..3521545,3521728..3521876,3522081..3522217,3530041..3530126,3530248..3530369,3538026..3538500,3540603..3540764,3541207..3541271,3542412..3542449,3542555..3542765,3543323..3543497,3543593..3543763,3544400..3545228,3545426..3545880,3546061..3546159,3547018..3547232,3547681..3547843,3548451..3548536,3548689..3548782,3549226..3549327,3563146..3563354,3571579..3571695,3572601..3572708,3572849..3572917))
location: region:3514138-3572917:-1
so has part: feature:3572849-3572917:-1:exon
so has part: feature:3572601-3572708:-1:exon
so has part: feature:3571579-3571695:-1:exon
so has part: feature:3563146-3563354:-1:exon
so has part: feature:3549226-3549327:-1:exon
so has part: feature:3548689-3548782:-1:exon
so has part: feature:3548451-3548536:-1:exon
so has part: feature:3547681-3547843:-1:exon
so has part: feature:3547018-3547232:-1:exon
so has part: feature:3546061-3546159:-1:exon
so has part: feature:3545426-3545880:-1:exon
so has part: feature:3544400-3545228:-1:exon
so has part: feature:3543593-3543763:-1:exon
so has part: feature:3543323-3543497:-1:exon
so has part: feature:3542555-3542765:-1:exon
so has part: feature:3542412-3542449:-1:exon
so has part: feature:3541207-3541271:-1:exon
so has part: feature:3540603-3540764:-1:exon
so has part: feature:3538026-3538500:-1:exon
so has part: feature:3530248-3530369:-1:exon
so has part: feature:3530041-3530126:-1:exon
so has part: feature:3522081-3522217:-1:exon
so has part: feature:3521728-3521876:-1:exon
so has part: feature:3521455-3521545:-1:exon
so has part: feature:3519421-3519577:-1:exon
so has part: feature:3518970-3519147:-1:exon
so has part: feature:3518406-3518621:-1:exon
so has part: feature:3516025-3516087:-1:exon
so has part: feature:3514138-3515453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3572849-3572917:-1:exon

position:3572849:-1
position: 3572849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3572601-3572708:-1:exon

position:3572601:-1
position: 3572601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3572708:-1
position: 3572708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3571579-3571695:-1:exon

position:3571579:-1
position: 3571579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3571695:-1
position: 3571695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3563146-3563354:-1:exon

position:3563146:-1
position: 3563146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3563354:-1
position: 3563354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3549226-3549327:-1:exon

position:3549226:-1
position: 3549226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3549327:-1
position: 3549327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3548689-3548782:-1:exon

position:3548689:-1
position: 3548689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3548782:-1
position: 3548782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3548451-3548536:-1:exon

position:3548451:-1
position: 3548451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3548536:-1
position: 3548536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3547681-3547843:-1:exon

position:3547681:-1
position: 3547681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3547843:-1
position: 3547843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3547018-3547232:-1:exon

position:3547018:-1
position: 3547018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3547232:-1
position: 3547232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3546061-3546159:-1:exon

position:3546061:-1
position: 3546061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3546159:-1
position: 3546159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3545426-3545880:-1:exon

position:3545426:-1
position: 3545426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3545880:-1
position: 3545880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3544400-3545228:-1:exon

position:3544400:-1
position: 3544400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3545228:-1
position: 3545228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3543593-3543763:-1:exon

position:3543593:-1
position: 3543593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3543763:-1
position: 3543763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3543323-3543497:-1:exon

position:3543323:-1
position: 3543323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3543497:-1
position: 3543497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3542555-3542765:-1:exon

position:3542555:-1
position: 3542555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3542765:-1
position: 3542765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3542412-3542449:-1:exon

position:3542412:-1
position: 3542412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3542449:-1
position: 3542449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3541207-3541271:-1:exon

position:3541207:-1
position: 3541207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3541271:-1
position: 3541271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3540603-3540764:-1:exon

position:3540603:-1
position: 3540603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3540764:-1
position: 3540764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3538026-3538500:-1:exon

position:3538026:-1
position: 3538026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3538500:-1
position: 3538500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3530248-3530369:-1:exon

position:3530248:-1
position: 3530248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3530369:-1
position: 3530369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3530041-3530126:-1:exon

position:3530041:-1
position: 3530041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3530126:-1
position: 3530126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3522081-3522217:-1:exon

position:3522081:-1
position: 3522081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3522217:-1
position: 3522217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3521728-3521876:-1:exon

position:3521728:-1
position: 3521728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3521876:-1
position: 3521876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3521455-3521545:-1:exon

position:3521455:-1
position: 3521455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3521545:-1
position: 3521545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3519421-3519577:-1:exon

position:3519421:-1
position: 3519421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3519577:-1
position: 3519577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3518970-3519147:-1:exon

position:3518970:-1
position: 3518970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3519147:-1
position: 3519147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3518406-3518621:-1:exon

position:3518406:-1
position: 3518406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3518621:-1
position: 3518621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3516025-3516087:-1:exon

position:3516025:-1
position: 3516025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3516087:-1
position: 3516087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3514138-3515453:-1:exon

position:3515453:-1
position: 3515453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111952089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111952089
product: tyrosine-protein phosphatase non-receptor type 20-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023970576.1
SIO_010081: LOC111952089
subclass of: SO_0000673
so part of: LOC111952089
location: complement(join(3514138..3515453,3516025..3516087,3518406..3518621,3518970..3519147,3519421..3519577,3521455..3521545,3521728..3521876,3522081..3522217,3530041..3530126,3530248..3530369,3538026..3538500,3540603..3540764,3541207..3541271,3541691..3541786))
location: region:3514138-3541786:-1
so has part: feature:3541691-3541786:-1:exon
so has part: feature:3541207-3541271:-1:exon
so has part: feature:3540603-3540764:-1:exon
so has part: feature:3538026-3538500:-1:exon
so has part: feature:3530248-3530369:-1:exon
so has part: feature:3530041-3530126:-1:exon
so has part: feature:3522081-3522217:-1:exon
so has part: feature:3521728-3521876:-1:exon
so has part: feature:3521455-3521545:-1:exon
so has part: feature:3519421-3519577:-1:exon
so has part: feature:3518970-3519147:-1:exon
so has part: feature:3518406-3518621:-1:exon
so has part: feature:3516025-3516087:-1:exon
so has part: feature:3514138-3515453:-1:exon

position:3541786:-1
position: 3541786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3541691-3541786:-1:exon

position:3541691:-1
position: 3541691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3541207-3541271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3540603-3540764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3538026-3538500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3530248-3530369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3530041-3530126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3522081-3522217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3521728-3521876:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3521455-3521545:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3519421-3519577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3518970-3519147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3518406-3518621:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3516025-3516087:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3514138-3515453:-1:exon

LOC111952089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952089
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(3545102..3545104),aa:OTHER)
product: LOW QUALITY PROTEIN: tyrosine-protein phosphatase non-receptor type 13-like isoform X1
translation: MLDRGIGCQTSLSGTEFQPAMEELEEALALSNLATPKXGKRLHIPVVRILDAQEVCSRSPSICSLTARKQLVVELHKANGSLGISVAGGMNSCVRYEGIYIKSLVPGAAAEQDGRIQIGDRLLEVDGSNLRGVTHKQAVECLKKTGEVVSLLLEREPQVVLEAGANRPRSASQSQSGSLRRDSSMEMTLSDKTKDYSFVTDDNTLKVLLKKSLCGLGFSFYISELNSGCDQGSSVVRIKTLFQGQPAQESGQIREGDVILAVNGQWVKGLSYQRVLFLLRGPPSEVHLTLCRPALGVLSQLDADTLVPFLFPTRGVRSKSLDIRLEEDYSQLLKLQAYQNHHYNQENQAQKEPMQTSQAQDQASMQASQTDKYPEPSGGPKTQQSRDSQDREMDAAENQPSSPSPTPPSPPSPISLASRSDAGDSEELSVVDEDEEVSEEMSSASVGAKTSTSPVYTSGIREEADGSLTYCLMGDGITILADKEYLTISSTSDSPSSLTXNTSCTPSVAPHTTSHTPRTRSTPPTRVRSTTPKSTSIPHSLFSQTTSSTNPNLSSQTTSVQQTPSQPSSRPTSSLSSRMSDLNISHSVHPLQPQHATPPVLSLSSHTSNPKSRTSDRKQSITSDRKHSITSDRKHSIPSDRKYSITSDRKHSITFKTTNASNITRSVIQYNPQPPDTLPPSQPPARHPSPQPPLSSLSPPIQAAPLPHTHPTWRQETEGEEDEDEDENXEDPRKGMMKEFEMCVVLTKSWSGSFGFTITRSKLDACYYIQDILDNPAKTDGRLRPGDRLVTVNGQDMTNVTDEVAMSILRSSPRRLSLILGRAVTNLIAPPFPDHLQDIILHKTPTGQLGIKLTGGIGSKWQGIYCLEVVPGSPACEEGRVQPNDRILYICGRCTMGMTLEDAVKACENAPRRVKLKATRDDQPVTPKAKSNAKAMPEATGKFRPLLSVTSDQDSCILQIYVCKPERGGLGFALIGGCNGSTLRVKEICAGGVAQQDGQLRVGDILLEVNGIIVSGLSHCKVVDILRQAEGNIQLTICRDIPRANTAPCTDAFFSMGFPGDSMAVCPGSNMASCPGSASNMTSCPGSASNMASCPGSNMASYPGSNMSSYPGSNMASCPEVNMATSNGSNMASCTGSNVSVFIEAKPYSNPSACSSPDVQQEDLPPEGTSDPVPDVEEDITPRLPPDPSYHPSLRLRALTEEDMAGQESCNSKPSHPACCLSSKSMTNLLHEASNRNQIPVMPLDKTMMGSKNSQSDGWSREDEDDETFEAKGQETMSPFPGPPIVSEEELASLAMISPAKTSQYAGSRVKALIQILQHQLDQQELVREFMALEHLKPSDNCLVGKAPENREKNRYRDILPYDKTRVPVGDNQDYINASYIHMEVGSEEFIYISCQGPLPSTVPXFWQMVWENRSDVIAMMTQEVERGRVKCHRYWPERVSCPLDTGRFQLSLENQQIKEYFHIKIIRMVEKESGETHFVRHLKFMRWPDHGVPRCSEQLVRFIRYLRAVHHKGPVTVHCSAGIGRTGVLICTDVILSLIENDLPINVSNIVREMRLQRYGMIQTKEQYLFCYKVWLEVLHRILQLHGKHWQPESPRELNASPRTHSNRWQPESPHEDNQFV
SIO_010081: LOC111952089
subclass of: SO_0000673
so part of: LOC111952089
location: complement(join(3515283..3515453,3516025..3516087,3518406..3518621,3518970..3519147,3519421..3519577,3521455..3521545,3521728..3521876,3522081..3522217,3530041..3530126,3530248..3530369,3538026..3538500,3540603..3540764,3541207..3541271,3542412..3542449,3542555..3542765,3543323..3543497,3543593..3543763,3544400..3545228,3545426..3545880,3546061..3546159,3547018..3547232,3547681..3547843,3548451..3548536,3548689..3548782,3549226..3549327,3563146..3563304))
location: region:3515283-3563304:-1
so has part: feature:3563146-3563304:-1:exon
so has part: feature:3549226-3549327:-1:exon
so has part: feature:3548689-3548782:-1:exon
so has part: feature:3548451-3548536:-1:exon
so has part: feature:3547681-3547843:-1:exon
so has part: feature:3547018-3547232:-1:exon
so has part: feature:3546061-3546159:-1:exon
so has part: feature:3545426-3545880:-1:exon
so has part: feature:3544400-3545228:-1:exon
so has part: feature:3543593-3543763:-1:exon
so has part: feature:3543323-3543497:-1:exon
so has part: feature:3542555-3542765:-1:exon
so has part: feature:3542412-3542449:-1:exon
so has part: feature:3541207-3541271:-1:exon
so has part: feature:3540603-3540764:-1:exon
so has part: feature:3538026-3538500:-1:exon
so has part: feature:3530248-3530369:-1:exon
so has part: feature:3530041-3530126:-1:exon
so has part: feature:3522081-3522217:-1:exon
so has part: feature:3521728-3521876:-1:exon
so has part: feature:3521455-3521545:-1:exon
so has part: feature:3519421-3519577:-1:exon
so has part: feature:3518970-3519147:-1:exon
so has part: feature:3518406-3518621:-1:exon
so has part: feature:3516025-3516087:-1:exon
so has part: feature:3515283-3515453:-1:exon

XP_023826343.1
type: Protein
SIO_000068: ncbiprotein

position:3515283:-1
position: 3515283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3563304:-1
position: 3563304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3563146-3563304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3549226-3549327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3548689-3548782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3548451-3548536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3547681-3547843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3547018-3547232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3546061-3546159:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3545426-3545880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3544400-3545228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3543593-3543763:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3543323-3543497:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3542555-3542765:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3542412-3542449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541207-3541271:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3540603-3540764:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3538026-3538500:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3530248-3530369:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3530041-3530126:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3522081-3522217:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3521728-3521876:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3521455-3521545:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3519421-3519577:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3518970-3519147:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3518406-3518621:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3516025-3516087:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3515283-3515453:-1:exon

LOC111952089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111952089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 20-like isoform X2
translation: MATEEGGQPKAMPEATGKFRPLLSVTSDQDSCILQIYVCKPERGGLGFALIGGCNGSTLRVKEICAGGVAQQDGQLRVGDILLEVNGIIVSGLSHCKVVDILRQAEGNIQLTICRDIPRANTAPCTDAFFSMGFPGDSMAVCPGSNMASCPGSASNMTSCPGSASNMASCPGSNMASYPGSNMSSYPGSNMASCPEVNMATSNGSNMASCTGSNVSVFIEAKPYSNPSACSSPDVQQEDLPPEGTSDPVPDVEEDITPRLPPDPSYHPSLRLRALTEEDMAGQESCNSKPSHPACCLSSKSMTNLLHEASNRNQIPVMPLDKTMMGSKNSQSDGWSREDEDDETFEAKGQETMSPFPGPPIVSEEELASLAMISPAKTSQYAGSRVKALIQILQHQLDQQELVREFMALEHLKPSDNCLVGKAPENREKNRYRDILPYDKTRVPVGDNQDYINASYIHMEVGSEEFIYISCQGPLPSTVPXFWQMVWENRSDVIAMMTQEVERGRVKCHRYWPERVSCPLDTGRFQLSLENQQIKEYFHIKIIRMVEKESGETHFVRHLKFMRWPDHGVPRCSEQLVRFIRYLRAVHHKGPVTVHCSAGIGRTGVLICTDVILSLIENDLPINVSNIVREMRLQRYGMIQTKEQYLFCYKVWLEVLHRILQLHGKHWQPESPRELNASPRTHSNRWQPESPHEDNQFV
SIO_010081: LOC111952089
subclass of: SO_0000673
so part of: LOC111952089
location: complement(join(3515283..3515453,3516025..3516087,3518406..3518621,3518970..3519147,3519421..3519577,3521455..3521545,3521728..3521876,3522081..3522217,3530041..3530126,3530248..3530369,3538026..3538500,3540603..3540764,3541207..3541271,3541691..3541715))
location: region:3515283-3541715:-1
so has part: feature:3541691-3541715:-1:exon
so has part: feature:3541207-3541271:-1:exon
so has part: feature:3540603-3540764:-1:exon
so has part: feature:3538026-3538500:-1:exon
so has part: feature:3530248-3530369:-1:exon
so has part: feature:3530041-3530126:-1:exon
so has part: feature:3522081-3522217:-1:exon
so has part: feature:3521728-3521876:-1:exon
so has part: feature:3521455-3521545:-1:exon
so has part: feature:3519421-3519577:-1:exon
so has part: feature:3518970-3519147:-1:exon
so has part: feature:3518406-3518621:-1:exon
so has part: feature:3516025-3516087:-1:exon
so has part: feature:3515283-3515453:-1:exon

XP_023826344.1
type: Protein
SIO_000068: ncbiprotein

position:3541715:-1
position: 3541715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3541691-3541715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3541207-3541271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3540603-3540764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3538026-3538500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3530248-3530369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3530041-3530126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3522081-3522217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3521728-3521876:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3521455-3521545:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3519421-3519577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3518970-3519147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3518406-3518621:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3516025-3516087:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3515283-3515453:-1:exon

LOC111951650
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4071658..4072786
location: region:4071658-4072786:1
so has part: feature:4071658-4072786:1:exon
subclass of: SO_0000011

111951650
type: Gene
SIO_000068: ncbigene

position:4071658:1
position: 4071658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4072786:1
position: 4072786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071658-4072786:1:exon

LOC111951650
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111951650
product: uncharacterized LOC111951650
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002875635.1
SIO_010081: LOC111951650
subclass of: SO_0000673
so part of: LOC111951650
location: join(4071658..4072098,4072337..4072481,4072592..4072786)
location: region:4071658-4072786:1
so has part: feature:4071658-4072098:1:exon
so has part: feature:4072337-4072481:1:exon
so has part: feature:4072592-4072786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4071658-4072098:1:exon

position:4072098:1
position: 4072098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4072337-4072481:1:exon

position:4072337:1
position: 4072337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4072481:1
position: 4072481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4072592-4072786:1:exon

position:4072592:1
position: 4072592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111951775
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111951775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4180272..4242091)
location: region:4180272-4242091:-1
so has part: feature:4180272-4242091:-1:exon
subclass of: SO_0000010

111951775
type: Gene
SIO_000068: ncbigene

position:4180272:-1
position: 4180272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4242091:-1
position: 4242091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4180272-4242091:-1:exon

LOC111951775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111951775
product: canalicular multispecific organic anion transporter 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023969980.1
SIO_010081: LOC111951775
subclass of: SO_0000673
so part of: LOC111951775
location: complement(join(4180272..4181176,4181740..4181934,4184762..4184928,4185077..4185235,4193550..4193693,4195280..4195381,4196558..4196684,4198164..4198363,4202525..4202680,4202939..4203093,4203265..4203484,4204807..4204915,4211540..4211675,4211776..4211950,4212203..4212370,4212847..4213023,4214749..4214875,4215165..4215231,4215734..4215818,4216093..4216239,4216324..4216461,4217421..4217486,4217906..4218160,4222581..4222758,4226214..4226389,4227018..4227273,4227456..4227511,4227695..4227817,4236089..4236229,4236443..4236589,4236775..4236788,4237091..4237101,4238711..4238856,4241415..4242091))
location: region:4180272-4242091:-1
so has part: feature:4241415-4242091:-1:exon
so has part: feature:4238711-4238856:-1:exon
so has part: feature:4237091-4237101:-1:exon
so has part: feature:4236775-4236788:-1:exon
so has part: feature:4236443-4236589:-1:exon
so has part: feature:4236089-4236229:-1:exon
so has part: feature:4227695-4227817:-1:exon
so has part: feature:4227456-4227511:-1:exon
so has part: feature:4227018-4227273:-1:exon
so has part: feature:4226214-4226389:-1:exon
so has part: feature:4222581-4222758:-1:exon
so has part: feature:4217906-4218160:-1:exon
so has part: feature:4217421-4217486:-1:exon
so has part: feature:4216324-4216461:-1:exon
so has part: feature:4216093-4216239:-1:exon
so has part: feature:4215734-4215818:-1:exon
so has part: feature:4215165-4215231:-1:exon
so has part: feature:4214749-4214875:-1:exon
so has part: feature:4212847-4213023:-1:exon
so has part: feature:4212203-4212370:-1:exon
so has part: feature:4211776-4211950:-1:exon
so has part: feature:4211540-4211675:-1:exon
so has part: feature:4204807-4204915:-1:exon
so has part: feature:4203265-4203484:-1:exon
so has part: feature:4202939-4203093:-1:exon
so has part: feature:4202525-4202680:-1:exon
so has part: feature:4198164-4198363:-1:exon
so has part: feature:4196558-4196684:-1:exon
so has part: feature:4195280-4195381:-1:exon
so has part: feature:4193550-4193693:-1:exon
so has part: feature:4185077-4185235:-1:exon
so has part: feature:4184762-4184928:-1:exon
so has part: feature:4181740-4181934:-1:exon
so has part: feature:4180272-4181176:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4241415-4242091:-1:exon

position:4241415:-1
position: 4241415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4238711-4238856:-1:exon

position:4238711:-1
position: 4238711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4238856:-1
position: 4238856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4237091-4237101:-1:exon

position:4237091:-1
position: 4237091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4237101:-1
position: 4237101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4236775-4236788:-1:exon

position:4236775:-1
position: 4236775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4236788:-1
position: 4236788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4236443-4236589:-1:exon

position:4236443:-1
position: 4236443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4236589:-1
position: 4236589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4236089-4236229:-1:exon

position:4236089:-1
position: 4236089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4236229:-1
position: 4236229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4227695-4227817:-1:exon

position:4227695:-1
position: 4227695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4227817:-1
position: 4227817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4227456-4227511:-1:exon

position:4227456:-1
position: 4227456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4227511:-1
position: 4227511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4227018-4227273:-1:exon

position:4227018:-1
position: 4227018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4227273:-1
position: 4227273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4226214-4226389:-1:exon

position:4226214:-1
position: 4226214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4226389:-1
position: 4226389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4222581-4222758:-1:exon

position:4222581:-1
position: 4222581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4222758:-1
position: 4222758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4217906-4218160:-1:exon

position:4217906:-1
position: 4217906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4218160:-1
position: 4218160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4217421-4217486:-1:exon

position:4217421:-1
position: 4217421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4217486:-1
position: 4217486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4216324-4216461:-1:exon

position:4216324:-1
position: 4216324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4216461:-1
position: 4216461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4216093-4216239:-1:exon

position:4216093:-1
position: 4216093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4216239:-1
position: 4216239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4215734-4215818:-1:exon

position:4215734:-1
position: 4215734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4215818:-1
position: 4215818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4215165-4215231:-1:exon

position:4215165:-1
position: 4215165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4215231:-1
position: 4215231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4214749-4214875:-1:exon

position:4214749:-1
position: 4214749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4214875:-1
position: 4214875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4212847-4213023:-1:exon

position:4212847:-1
position: 4212847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4213023:-1
position: 4213023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4212203-4212370:-1:exon

position:4212203:-1
position: 4212203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4212370:-1
position: 4212370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4211776-4211950:-1:exon

position:4211776:-1
position: 4211776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4211950:-1
position: 4211950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4211540-4211675:-1:exon

position:4211540:-1
position: 4211540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4211675:-1
position: 4211675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4204807-4204915:-1:exon

position:4204807:-1
position: 4204807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4204915:-1
position: 4204915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4203265-4203484:-1:exon

position:4203265:-1
position: 4203265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4203484:-1
position: 4203484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4202939-4203093:-1:exon

position:4202939:-1
position: 4202939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4203093:-1
position: 4203093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4202525-4202680:-1:exon

position:4202525:-1
position: 4202525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4202680:-1
position: 4202680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4198164-4198363:-1:exon

position:4198164:-1
position: 4198164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4198363:-1
position: 4198363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4196558-4196684:-1:exon

position:4196558:-1
position: 4196558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4196684:-1
position: 4196684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4195280-4195381:-1:exon

position:4195280:-1
position: 4195280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4195381:-1
position: 4195381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4193550-4193693:-1:exon

position:4193550:-1
position: 4193550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4193693:-1
position: 4193693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4185077-4185235:-1:exon

position:4185077:-1
position: 4185077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4185235:-1
position: 4185235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4184762-4184928:-1:exon

position:4184762:-1
position: 4184762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4184928:-1
position: 4184928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4181740-4181934:-1:exon

position:4181740:-1
position: 4181740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4181934:-1
position: 4181934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4180272-4181176:-1:exon

position:4181176:-1
position: 4181176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111951775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111951775
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: canalicular multispecific organic anion transporter 1-like
translation: MTAEALEKYCGSIFWNSSFLERXDPDLPVCVEQTVLVWXSAGFLWLCAPWHIAVLCRKATATKHLTKSYLCKQIVVGLLFLTALAGLAVTLVEDYGPTRXTPATEKNPWVFYANPILFAVSWILLMLCQEGVRRREGAVDSATLFLFWMILVVCDIFPFQTLLREALRMGEIPDLSRFCLFYISFGLELIALILSAFADVPREAEDLVKKNPEVGAPFLSRITFNWFNSMVLNGFKRPLVQKDMWELSEAESTLQISQRFQQTMQTELKAASTRLQTKMRKRGEEKASKGQGEGLQNGHQNSLGKGVSQDVLMMKEKGDKKDKKKKKKEEKEDYPKSWLIPTIRTTFKGVLWESAFFKLVTDLLSFASPQILKLMISFTTDKSIYTWTGYMYAVLLILVAIFQSLFLQQYFQRCFVLGMKVRTAIMAAVYKKALVVSNDARKESTVGETVNLMSADAQRFNDVINFIHLLWSCPLQIALAIAFLWIELGPAVLAGLAVMVLMVPINGLLANMSKNVQIENMKYKDKRMKIVNEMLNGIKILKLYAWEPSFQNQVMGIREQELVVMRKFAYLSSVSTFIFSCAPALVSLATFAVFVAVDSENVLDAGKAFTSISLFNILRFPLAFLPMLIAAMVQTSVSKTRLEKFLGGDDLDTNIVRHDPSFNTAVSVCNGTFAWEKDAEPVLKNVSLEIKPGKLVAVVGVVGSGKSSLISAILGEMHSAKGFINVQGSVAFVPQQAWIQNATLRDNILFGYPLEDSRFQATLEACALGPDLELLPGGDQTEIGEKGINLSGGQKQRVSLARAAYSQADVYLLDDPLSAVDSHVGKHLFEEVVGPKGILKDKTRILVTHGVSFLPYVDEIVVLKDGCVSEVGSYQSLKDSKGAFSEFLDTYANEEGKKHTDPTSDGEEVGVVPDLQDPQADTPPEDIVSMTLKRESSIRRSQRNGSIRLRKNSSLKKPKPPADDETKKGQRXIEKESMETGQVKFSVYLQYLRAMGWGYSTMFFLVYFIQNVAFIGQNLWLSDWTNDAEDYYNKTYPNWKRDTRIGVFGALGVAQGVFVFMGTLLLANGSINASRILHTRLLNNILRVPMMFFDTTPSGRVVNRFAKDIFTVDEAIPQSLRSWIMCFLGVLGTLFVICLATPIFTAIIIPLAVVYYFVQRFYVASSRQLRRLDSVSRSPIYSHFGETVSGLSVIRAYGHQDRFLKHNEKVIDENLKSVYPWIVSNRWLAIRLEFLGNLVVFFSALLAVIARDSLDSGLVGLSISYALNVTQTLNWLVRMTSELETNIVAVERVSEYTEIENEADWVSEIRPPEKWPEAGRLRFENFKVRYRPELDLVLHGITCEIDSTEKIGIVGRTGAGKSSLTNCLFRIIEAAEGRILIDGTDIATLGLHDLRSRLTIIPQDPVLFSGTLRMNLDPFETFXDEEIWRVLELSHLKEYVGGLQEGLTHEVSEGGENLSIGQRQLLCLARALLRKSRILILDEATAAVDLETDNLIQKTIRREFSHCTVLTIAHRLHSILDSSRVMVLDAGKIVEFDSPSTLFKKQGHFYSMARDAGITTVDSTAXYSTVLDSTTL
SIO_010081: LOC111951775
subclass of: SO_0000673
so part of: LOC111951775
location: complement(join(4181017..4181176,4181740..4181934,4184762..4184928,4185077..4185235,4193550..4193693,4195280..4195381,4196558..4196684,4198164..4198363,4202525..4202680,4202939..4203093,4203265..4203484,4204807..4204915,4211540..4211675,4211776..4211950,4212203..4212370,4212847..4213023,4214749..4214875,4215165..4215231,4215734..4215818,4216093..4216239,4216324..4216461,4217421..4217486,4217906..4218160,4222581..4222758,4226214..4226389,4227018..4227273,4227456..4227511,4227695..4227817,4236089..4236229,4236443..4236589,4236775..4236788,4237091..4237101,4238711..4238856,4241415..4241459))
location: region:4181017-4241459:-1
so has part: feature:4241415-4241459:-1:exon
so has part: feature:4238711-4238856:-1:exon
so has part: feature:4237091-4237101:-1:exon
so has part: feature:4236775-4236788:-1:exon
so has part: feature:4236443-4236589:-1:exon
so has part: feature:4236089-4236229:-1:exon
so has part: feature:4227695-4227817:-1:exon
so has part: feature:4227456-4227511:-1:exon
so has part: feature:4227018-4227273:-1:exon
so has part: feature:4226214-4226389:-1:exon
so has part: feature:4222581-4222758:-1:exon
so has part: feature:4217906-4218160:-1:exon
so has part: feature:4217421-4217486:-1:exon
so has part: feature:4216324-4216461:-1:exon
so has part: feature:4216093-4216239:-1:exon
so has part: feature:4215734-4215818:-1:exon
so has part: feature:4215165-4215231:-1:exon
so has part: feature:4214749-4214875:-1:exon
so has part: feature:4212847-4213023:-1:exon
so has part: feature:4212203-4212370:-1:exon
so has part: feature:4211776-4211950:-1:exon
so has part: feature:4211540-4211675:-1:exon
so has part: feature:4204807-4204915:-1:exon
so has part: feature:4203265-4203484:-1:exon
so has part: feature:4202939-4203093:-1:exon
so has part: feature:4202525-4202680:-1:exon
so has part: feature:4198164-4198363:-1:exon
so has part: feature:4196558-4196684:-1:exon
so has part: feature:4195280-4195381:-1:exon
so has part: feature:4193550-4193693:-1:exon
so has part: feature:4185077-4185235:-1:exon
so has part: feature:4184762-4184928:-1:exon
so has part: feature:4181740-4181934:-1:exon
so has part: feature:4181017-4181176:-1:exon

XP_023825748.1
type: Protein
SIO_000068: ncbiprotein

position:4181017:-1
position: 4181017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4241459:-1
position: 4241459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4241415-4241459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4238711-4238856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4237091-4237101:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4236775-4236788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4236443-4236589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4236089-4236229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4227695-4227817:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4227456-4227511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4227018-4227273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4226214-4226389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4222581-4222758:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4217906-4218160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4217421-4217486:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4216324-4216461:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4216093-4216239:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4215734-4215818:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4215165-4215231:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4214749-4214875:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4212847-4213023:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4212203-4212370:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4211776-4211950:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4211540-4211675:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4204807-4204915:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4203265-4203484:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4202939-4203093:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4202525-4202680:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4198164-4198363:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4196558-4196684:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4195280-4195381:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4193550-4193693:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4185077-4185235:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4184762-4184928:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4181740-4181934:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4181017-4181176:-1:exon

lrrfip2
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: lrrfip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4272534..4340101
location: region:4272534-4340101:1
so has part: feature:4272534-4340101:1:exon
subclass of: SO_0000010

111952032
type: Gene
SIO_000068: ncbigene

position:4272534:1
position: 4272534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4340101:1
position: 4340101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4272534-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_023970447.2
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272534..4272648,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272534-4340101:1
so has part: feature:4272534-4272648:1:exon
so has part: feature:4274722-4274878:1:exon
so has part: feature:4312730-4312816:1:exon
so has part: feature:4313124-4313186:1:exon
so has part: feature:4315980-4316042:1:exon
so has part: feature:4316139-4316183:1:exon
so has part: feature:4316409-4316486:1:exon
so has part: feature:4317216-4317317:1:exon
so has part: feature:4320897-4320962:1:exon
so has part: feature:4321305-4321394:1:exon
so has part: feature:4321868-4321927:1:exon
so has part: feature:4322308-4322364:1:exon
so has part: feature:4322488-4322529:1:exon
so has part: feature:4323268-4323339:1:exon
so has part: feature:4323752-4323868:1:exon
so has part: feature:4324362-4324403:1:exon
so has part: feature:4324738-4324869:1:exon
so has part: feature:4325758-4325829:1:exon
so has part: feature:4327033-4327203:1:exon
so has part: feature:4331836-4331928:1:exon
so has part: feature:4332373-4332465:1:exon
so has part: feature:4337250-4337351:1:exon
so has part: feature:4337956-4338088:1:exon
so has part: feature:4338249-4338298:1:exon
so has part: feature:4338394-4338514:1:exon
so has part: feature:4338757-4338836:1:exon
so has part: feature:4338958-4339062:1:exon
so has part: feature:4339146-4340101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4272534-4272648:1:exon

position:4272648:1
position: 4272648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4274722-4274878:1:exon

position:4274722:1
position: 4274722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4274878:1
position: 4274878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4312730-4312816:1:exon

position:4312730:1
position: 4312730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4312816:1
position: 4312816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4313124-4313186:1:exon

position:4313124:1
position: 4313124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4313186:1
position: 4313186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4315980-4316042:1:exon

position:4315980:1
position: 4315980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4316042:1
position: 4316042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4316139-4316183:1:exon

position:4316139:1
position: 4316139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4316183:1
position: 4316183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4316409-4316486:1:exon

position:4316409:1
position: 4316409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4316486:1
position: 4316486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4317216-4317317:1:exon

position:4317216:1
position: 4317216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4317317:1
position: 4317317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4320897-4320962:1:exon

position:4320897:1
position: 4320897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4320962:1
position: 4320962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4321305-4321394:1:exon

position:4321305:1
position: 4321305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4321394:1
position: 4321394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4321868-4321927:1:exon

position:4321868:1
position: 4321868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4321927:1
position: 4321927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4322308-4322364:1:exon

position:4322308:1
position: 4322308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4322364:1
position: 4322364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4322488-4322529:1:exon

position:4322488:1
position: 4322488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4322529:1
position: 4322529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4323268-4323339:1:exon

position:4323268:1
position: 4323268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4323339:1
position: 4323339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4323752-4323868:1:exon

position:4323752:1
position: 4323752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4323868:1
position: 4323868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4324362-4324403:1:exon

position:4324362:1
position: 4324362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4324403:1
position: 4324403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4324738-4324869:1:exon

position:4324738:1
position: 4324738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4324869:1
position: 4324869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4325758-4325829:1:exon

position:4325758:1
position: 4325758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4325829:1
position: 4325829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4327033-4327203:1:exon

position:4327033:1
position: 4327033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4327203:1
position: 4327203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4331836-4331928:1:exon

position:4331836:1
position: 4331836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4331928:1
position: 4331928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4332373-4332465:1:exon

position:4332373:1
position: 4332373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4332465:1
position: 4332465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4337250-4337351:1:exon

position:4337250:1
position: 4337250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4337351:1
position: 4337351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4337956-4338088:1:exon

position:4337956:1
position: 4337956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4338088:1
position: 4338088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4338249-4338298:1:exon

position:4338249:1
position: 4338249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4338298:1
position: 4338298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4338394-4338514:1:exon

position:4338394:1
position: 4338394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4338514:1
position: 4338514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4338757-4338836:1:exon

position:4338757:1
position: 4338757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4338836:1
position: 4338836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4338958-4339062:1:exon

position:4338958:1
position: 4338958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4339062:1
position: 4339062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4339146-4340101:1:exon

position:4339146:1
position: 4339146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_023970446.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
so has part: feature:4274722-4274878:1:exon
so has part: feature:4312730-4312816:1:exon
so has part: feature:4313124-4313186:1:exon
so has part: feature:4315980-4316042:1:exon
so has part: feature:4316139-4316183:1:exon
so has part: feature:4316409-4316486:1:exon
so has part: feature:4317216-4317317:1:exon
so has part: feature:4320897-4320962:1:exon
so has part: feature:4321305-4321394:1:exon
so has part: feature:4321868-4321927:1:exon
so has part: feature:4322308-4322364:1:exon
so has part: feature:4322488-4322529:1:exon
so has part: feature:4323268-4323339:1:exon
so has part: feature:4323752-4323868:1:exon
so has part: feature:4324362-4324403:1:exon
so has part: feature:4324738-4324869:1:exon
so has part: feature:4325758-4325829:1:exon
so has part: feature:4327033-4327203:1:exon
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position:4272659:1
position: 4272659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4272659-4273130:1:exon

position:4273130:1
position: 4273130
reference: sequence
type: ForwardStrandPosition
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urn:…
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urn:…
SIO_000300: 28
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_023970456.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
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SIO_000300: 16
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SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
SIO_000628: feature:4337956-4338088:1:exon

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SIO_000300: 23
SIO_000628: feature:4338249-4338298:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4338394-4338514:1:exon

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SIO_000300: 25
SIO_000628: feature:4338757-4338836:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_023970452.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:4272659-4273130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274722-4274878:1:exon

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SIO_000300: 3
SIO_000628: feature:4312730-4312816:1:exon

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SIO_000300: 4
SIO_000628: feature:4313124-4313186:1:exon

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SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:4320897-4320962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4321305-4321394:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4321868-4321927:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4322308-4322364:1:exon

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SIO_000300: 21
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SIO_000300: 22
SIO_000628: feature:4337956-4338088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4338249-4338298:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4338394-4338514:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4338757-4338836:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_023970458.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4327033..4327203,4331836..4331928,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023970449.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
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urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023970450.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
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urn:…
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SIO_000300: 12
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urn:…
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urn:…
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:4337250-4337351:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4337956-4338088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4338249-4338298:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4338394-4338514:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4338757-4338836:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_023970453.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
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so has part: feature:4339146-4340101:1:exon

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:4274722-4274878:1:exon

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SIO_000300: 3
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urn:…
SIO_000300: 7
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SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:4321305-4321394:1:exon

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SIO_000300: 10
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SIO_000628: feature:4322308-4322364:1:exon

urn:…
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urn:…
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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 23
SIO_000628: feature:4338249-4338298:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4338394-4338514:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4338757-4338836:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_023970448.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316142..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 6
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position:4316142:1
position: 4316142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4316409-4316486:1:exon

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urn:…
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urn:…
SIO_000300: 28
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lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_023970455.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316142..4316183,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 22
SIO_000628: feature:4337956-4338088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4338249-4338298:1:exon

urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:4338757-4338836:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_023970451.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
so has part: feature:4274722-4274878:1:exon
so has part: feature:4312730-4312816:1:exon
so has part: feature:4315980-4316042:1:exon
so has part: feature:4316139-4316183:1:exon
so has part: feature:4316409-4316486:1:exon
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so has part: feature:4320897-4320962:1:exon
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:4321305-4321394:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4321868-4321927:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4322308-4322364:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4322488-4322529:1:exon

urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:4337250-4337351:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4337956-4338088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4338249-4338298:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4338394-4338514:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4338757-4338836:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023970467.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272659..4273130,4274722..4274878,4312730..4312816,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272659-4340101:1
so has part: feature:4272659-4273130:1:exon
so has part: feature:4274722-4274878:1:exon
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so has part: feature:4320897-4320962:1:exon
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so has part: feature:4339146-4340101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4272659-4273130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274722-4274878:1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
SIO_000628: feature:4315980-4316042:1:exon

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SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:4317216-4317317:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4320897-4320962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4321305-4321394:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4321868-4321927:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4322308-4322364:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4322488-4322529:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4323268-4323339:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4323752-4323868:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4324362-4324403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4324738-4324869:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4325758-4325829:1:exon

urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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SIO_000300: 20
SIO_000628: feature:4337250-4337351:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4337956-4338088:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4338249-4338298:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4338394-4338514:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4338757-4338836:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023970459.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272660..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272660-4340101:1
so has part: feature:4272660-4273130:1:exon
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so has part: feature:4339146-4340101:1:exon

position:4272660:1
position: 4272660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4272660-4273130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274722-4274878:1:exon

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SIO_000300: 3
SIO_000628: feature:4312730-4312816:1:exon

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SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:4315980-4316042:1:exon

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SIO_000300: 6
SIO_000628: feature:4316139-4316183:1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:4321305-4321394:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4321868-4321927:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4322308-4322364:1:exon

urn:…
SIO_000300: 13
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:4338757-4338836:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_023970457.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272660..4273130,4274722..4274878,4312730..4312816,4313124..4313186,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4325758..4325829,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272660-4340101:1
so has part: feature:4272660-4273130:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:4272660-4273130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274722-4274878:1:exon

urn:…
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SIO_000628: feature:4312730-4312816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4313124-4313186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4315980-4316042:1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:4316409-4316486:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4317216-4317317:1:exon

urn:…
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urn:…
SIO_000300: 10
SIO_000628: feature:4321305-4321394:1:exon

urn:…
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SIO_000628: feature:4323268-4323339:1:exon

urn:…
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SIO_000628: feature:4323752-4323868:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4324362-4324403:1:exon

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SIO_000300: 14
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urn:…
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urn:…
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
SIO_000628: feature:4337250-4337351:1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:4338249-4338298:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4338394-4338514:1:exon

urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:4338958-4339062:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4339146-4340101:1:exon

lrrfip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lrrfip2
product: LRR binding FLII interacting protein 2, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_023970468.1
SIO_010081: lrrfip2
subclass of: SO_0000673
so part of: lrrfip2
location: join(4272660..4273130,4274722..4274878,4312730..4312816,4315980..4316042,4316139..4316183,4316409..4316486,4317216..4317317,4320897..4320962,4321305..4321394,4321868..4321927,4322308..4322364,4322488..4322529,4323268..4323339,4323752..4323868,4324362..4324403,4324738..4324869,4327033..4327203,4331836..4331928,4332373..4332465,4337250..4337351,4337956..4338088,4338249..4338298,4338394..4338514,4338757..4338836,4338958..4339062,4339146..4340101)
location: region:4272660-4340101:1
so has part: feature:4272660-4273130:1:exon
so has part: feature:4274722-4274878:1:exon
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so has part: feature:4316409-4316486:1:exon
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