Salvelinus alpinus isolate IW2-2015 linkage group LG6.1, ASM291031v2, whole genome shotgun sequence.
type: Entry
definition: Salvelinus alpinus isolate IW2-2015 linkage group LG6.1, ASM291031v2, whole genome shotgun sequence.
sequence version: NC_036845.1
sequence date: 2018-02-25
sequence: sequence
division: CON
label: NC_036845.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA433373
dblink: SAMN06561764
keyword: WGS
keyword: RefSeq
source: Salvelinus alpinus (Arctic char)
organism: Salvelinus alpinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM009433.1.\nAssembly name: ASM291031v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Victoria on\n2018/02/02. The original whole-genome shotgun project has the\naccession PPUY00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Victoria\nAssembly Date :: OCT-2017\nAssembly Method :: AllPaths v. 52488; PBSuite v. 15.8.24;\n SSpace-LongRead v. 1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 146.0x\nSequencing Technology :: Illumina Paired-End; Illumina Mate-Pair;\n PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Salvelinus alpinus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 30249148
topology: linear
so has quality: SO_0000987
location: 1..30249148
location: region:1-30249148:1
RO_0002162: 8036

NC_036845
type: RefSeq
SIO_000068: refseq

PRJNA433373
type: BioProject
SIO_000068: bioproject

SAMN06561764
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30249148:1
position: 30249148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30249148:1:source
so part of: sequence
organism: Salvelinus alpinus
mol type: genomic DNA
isolate: IW2-2015
tissue type: liver
dev stage: juvenile
collected by: Jon Lucas
linkage group: LG6.1

8036
type: Taxonomy
SIO_000068: taxonomy

LOC111964804
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21682..23635
location: region:21682-23635:1
so has part: feature:21682-23635:1:exon
subclass of: SO_0000011

111964804
type: Gene
SIO_000068: ncbigene

position:21682:1
position: 21682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23635:1
position: 23635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21682-23635:1:exon

LOC111964804
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964804
product: uncharacterized LOC111964804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_002877439.1
SIO_010081: LOC111964804
subclass of: SO_0000673
so part of: LOC111964804
location: join(21682..21752,21841..23635)
location: region:21682-23635:1
so has part: feature:21682-21752:1:exon
so has part: feature:21841-23635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21682-21752:1:exon

position:21752:1
position: 21752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21841-23635:1:exon

position:21841:1
position: 21841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964803
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(31694..>42866)
location: region:31694-42866:-1
so has part: feature:31694-42866:-1:exon
subclass of: SO_0000010

111964803
type: Gene
SIO_000068: ncbigene

position:31694:-1
position: 31694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42866:-1
position: 42866
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31694-42866:-1:exon

LOC111964803
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964803
product: solute carrier family 25 member 40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988596.1
SIO_010081: LOC111964803
subclass of: SO_0000673
so part of: LOC111964803
location: complement(join(31694..33959,37563..37782,38303..38370,42411..42517,42613..42672,42800..>42866))
location: region:31694-42866:-1
so has part: feature:42800-42866:-1:exon
so has part: feature:42613-42672:-1:exon
so has part: feature:42411-42517:-1:exon
so has part: feature:38303-38370:-1:exon
so has part: feature:37563-37782:-1:exon
so has part: feature:31694-33959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42800-42866:-1:exon

position:42800:-1
position: 42800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42613-42672:-1:exon

position:42613:-1
position: 42613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42672:-1
position: 42672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42411-42517:-1:exon

position:42411:-1
position: 42411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42517:-1
position: 42517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38303-38370:-1:exon

position:38303:-1
position: 38303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38370:-1
position: 38370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37563-37782:-1:exon

position:37563:-1
position: 37563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37782:-1
position: 37782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31694-33959:-1:exon

position:33959:-1
position: 33959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964803
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 40
translation: NGITPFQQMLASCSGALLTSLFVTPLDVVKIRLQAQKSPFPKGKCFVYXNGLMDHTCVCTNGNSKAWYKAPGHFNGTLDAFIKIVRREGIKSLWSGLPPTLIXAVPATVIYFTCYDQLRAALRVRMGSHADEAXLLAGALXRGELTSDLTXHCGDVYLRAINSDRVINIVLSIHYLLGFLPRVIKVVPACAIMISCYEFGKAFFRKHNQERLLTSNT
SIO_010081: LOC111964803
subclass of: SO_0000673
so part of: LOC111964803
location: complement(join(33828..33959,37563..37782,38303..38370,42411..42517,42613..42672,42800..>42866))
location: region:33828-42866:-1
so has part: feature:42800-42866:-1:exon
so has part: feature:42613-42672:-1:exon
so has part: feature:42411-42517:-1:exon
so has part: feature:38303-38370:-1:exon
so has part: feature:37563-37782:-1:exon
so has part: feature:33828-33959:-1:exon

XP_023844364.1
type: Protein
SIO_000068: ncbiprotein

position:33828:-1
position: 33828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42800-42866:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42613-42672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42411-42517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38303-38370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37563-37782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33828-33959:-1:exon

dbf4
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: dbf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43454..58297
location: region:43454-58297:1
so has part: feature:43454-58297:1:exon
subclass of: SO_0000010

111964571
type: Gene
SIO_000068: ncbigene

position:43454:1
position: 43454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58297:1
position: 58297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43454-58297:1:exon

dbf4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: dbf4
product: DBF4 zinc finger
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988418.1
SIO_010081: dbf4
subclass of: SO_0000673
so part of: dbf4
location: join(43454..43732,44084..44176,44290..44462,51354..51542,51667..51717,51920..51989,52097..52185,52278..52323,52895..52940,53063..53129,54656..54717,54804..54883,55939..55978,56274..56406,56555..56679,56967..58297)
location: region:43454-58297:1
so has part: feature:43454-43732:1:exon
so has part: feature:44084-44176:1:exon
so has part: feature:44290-44462:1:exon
so has part: feature:51354-51542:1:exon
so has part: feature:51667-51717:1:exon
so has part: feature:51920-51989:1:exon
so has part: feature:52097-52185:1:exon
so has part: feature:52278-52323:1:exon
so has part: feature:52895-52940:1:exon
so has part: feature:53063-53129:1:exon
so has part: feature:54656-54717:1:exon
so has part: feature:54804-54883:1:exon
so has part: feature:55939-55978:1:exon
so has part: feature:56274-56406:1:exon
so has part: feature:56555-56679:1:exon
so has part: feature:56967-58297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43454-43732:1:exon

position:43732:1
position: 43732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44084-44176:1:exon

position:44084:1
position: 44084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44176:1
position: 44176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44290-44462:1:exon

position:44290:1
position: 44290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44462:1
position: 44462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51354-51542:1:exon

position:51354:1
position: 51354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51542:1
position: 51542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51667-51717:1:exon

position:51667:1
position: 51667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51717:1
position: 51717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51920-51989:1:exon

position:51920:1
position: 51920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51989:1
position: 51989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:52097-52185:1:exon

position:52097:1
position: 52097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52185:1
position: 52185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:52278-52323:1:exon

position:52278:1
position: 52278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52323:1
position: 52323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:52895-52940:1:exon

position:52895:1
position: 52895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52940:1
position: 52940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:53063-53129:1:exon

position:53063:1
position: 53063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53129:1
position: 53129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:54656-54717:1:exon

position:54656:1
position: 54656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54717:1
position: 54717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:54804-54883:1:exon

position:54804:1
position: 54804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54883:1
position: 54883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:55939-55978:1:exon

position:55939:1
position: 55939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55978:1
position: 55978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:56274-56406:1:exon

position:56274:1
position: 56274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56406:1
position: 56406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:56555-56679:1:exon

position:56555:1
position: 56555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56679:1
position: 56679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:56967-58297:1:exon

position:56967:1
position: 56967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dbf4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: dbf4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein DBF4 homolog A
translation: MSIYGNILFYKTTGEYKDILFSSQIILNKMKSRRTQKSTKPRLQDPKLADKGHKSASKSHAKPPCESYPAQKKAFTGKLFYLDLPSNRRAETLENDIKXFGGTVEKVFSKEIKYLVSNKREARYVHVMXDSLVPSPDSGHSSPXPSPRSRSHRDSLKGSSQGQADMVVISRGKSFVKRIVKEQVRIQVNEILSNALEWGVKILYIDDVIAYMEKKKRNVKYTAEKPTATTAAVKKSAKGEPAGNPAFQKYKGGRIRKPFVKVVDSSRHYRPIYLAMPNMPEFNLTSAPPTVEKFFSKEIKYLVSNKREASHRDSLKGSSQGQADMVSQLFLSVSVTEDQEHSGKRPKEHGCLRNRGARVSASEERGQDPARRNREKKRGGYCECCTLKYNNIKAHLQSEQHKAFSRSDEYLVVDRLITTLPFNFSHVKTTQTPNTRSKYSITSLLCVPGPSIQMEEEKEGGVETKELKGGLMSLWSTTVEHPLSQSVENPLEQPRKRSRGAPVPHSTSEGEKRCSYVPDRPQPKHRSLSCKQRCXQGSPRKHPQRAGLSQTPVSNAEIDPSTHDSVANPRLSHQGQRTHTDKDGHSSFSHTEDLQCGDPAGRVNFDSSQHEVAGPSEHHKLRALEESELSHDTLAGDTLPGNTVGVSELEAGDTETHTPPPARTLQRRVRDYRRKRRKVEKQQTAQEQEKPSNVPSSSLLNLWQLFHSSEEMECEFRGFPSCSTPVST
SIO_010081: dbf4
subclass of: SO_0000673
so part of: dbf4
location: join(43693..43732,44084..44176,44290..44462,51354..51542,51667..51717,51920..51989,52097..52185,52278..52323,52895..52940,53063..53129,54656..54717,54804..54883,55939..55978,56274..56406,56555..56679,56967..57846)
location: region:43693-57846:1
so has part: feature:43693-43732:1:exon
so has part: feature:44084-44176:1:exon
so has part: feature:44290-44462:1:exon
so has part: feature:51354-51542:1:exon
so has part: feature:51667-51717:1:exon
so has part: feature:51920-51989:1:exon
so has part: feature:52097-52185:1:exon
so has part: feature:52278-52323:1:exon
so has part: feature:52895-52940:1:exon
so has part: feature:53063-53129:1:exon
so has part: feature:54656-54717:1:exon
so has part: feature:54804-54883:1:exon
so has part: feature:55939-55978:1:exon
so has part: feature:56274-56406:1:exon
so has part: feature:56555-56679:1:exon
so has part: feature:56967-57846:1:exon

XP_023844186.1
type: Protein
SIO_000068: ncbiprotein

position:43693:1
position: 43693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57846:1
position: 57846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43693-43732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44084-44176:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44290-44462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51354-51542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51667-51717:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51920-51989:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:52097-52185:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52278-52323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52895-52940:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53063-53129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:54656-54717:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:54804-54883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:55939-55978:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:56274-56406:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:56555-56679:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:56967-57846:1:exon

LOC112081103
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112081103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 62287..64993
location: region:62287-64993:1
so has part: feature:62287-64993:1:exon
subclass of: SO_0000011

112081103
type: Gene
SIO_000068: ncbigene

position:62287:1
position: 62287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64993:1
position: 64993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62287-64993:1:exon

LOC112081103
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC112081103
product: uncharacterized LOC112081103, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_002896317.1
SIO_010081: LOC112081103
subclass of: SO_0000673
so part of: LOC112081103
location: join(62287..62329,63271..63616,63957..64993)
location: region:62287-64993:1
so has part: feature:62287-62329:1:exon
so has part: feature:63271-63616:1:exon
so has part: feature:63957-64993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62287-62329:1:exon

position:62329:1
position: 62329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63271-63616:1:exon

position:63271:1
position: 63271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63616:1
position: 63616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63957-64993:1:exon

position:63957:1
position: 63957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112081103
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC112081103
product: uncharacterized LOC112081103, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_002896318.1
SIO_010081: LOC112081103
subclass of: SO_0000673
so part of: LOC112081103
location: join(62955..63080,63271..63616,63957..64993)
location: region:62955-64993:1
so has part: feature:62955-63080:1:exon
so has part: feature:63271-63616:1:exon
so has part: feature:63957-64993:1:exon

position:62955:1
position: 62955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62955-63080:1:exon

position:63080:1
position: 63080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63271-63616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63957-64993:1:exon

LOC111964573
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 69034..111238
location: region:69034-111238:1
so has part: feature:69034-111238:1:exon
subclass of: SO_0000010

111964573
type: Gene
SIO_000068: ncbigene

position:69034:1
position: 69034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111238:1
position: 111238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69034-111238:1:exon

LOC111964573
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964573
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024147103.1
SIO_010081: LOC111964573
subclass of: SO_0000673
so part of: LOC111964573
location: join(69034..69166,109717..111238)
location: region:69034-111238:1
so has part: feature:69034-69166:1:exon
so has part: feature:109717-111238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69034-69166:1:exon

position:69166:1
position: 69166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109717-111238:1:exon

position:109717:1
position: 109717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964573
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MEAELDPDILKNMGSCDWKLNQTQTLMRQGANHVAQASFQVDAFGEGPNSHSDREKSTSGDPVPLTPIPVRRHHCSQCGKSFTLLGNLKRHEKTHTGEKPFQCSQCGKSFTRLGNLNMHDRSHTGEKPFQCSQCGKGFTGLGHLKEHKRIHTGEKPFQCSQCGKGFTLLGNLNMHDRTHTGEKPFQCSQCGKGFTQLGNLKEHERTHTGETSYHCSLCGKDFAKLGSLKEHKRIHTGEKPFQCSQCGKSFTRLGHLKEHERIHTGDKTFQCSQCGKSFTRLGNLKRHEXVHTVFPIRPVCSRNRLRDQNQKLGKS
SIO_010081: LOC111964573
subclass of: SO_0000673
so part of: LOC111964573
location: join(69034..69166,109717..110531)
location: region:69034-110531:1
so has part: feature:69034-69166:1:exon
so has part: feature:109717-110531:1:exon

XP_024002871.1
type: Protein
SIO_000068: ncbiprotein

position:110531:1
position: 110531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69034-69166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109717-110531:1:exon

cldn12
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: cldn12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121939..125987)
location: region:121939-125987:-1
so has part: feature:121939-125987:-1:exon
subclass of: SO_0000010

111964805
type: Gene
SIO_000068: ncbigene

position:121939:-1
position: 121939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125987:-1
position: 125987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121939-125987:-1:exon

cldn12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: cldn12
product: claudin 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_023988598.1
SIO_010081: cldn12
subclass of: SO_0000673
so part of: cldn12
location: complement(join(121939..124409,124573..124833,125794..125984))
location: region:121939-125984:-1
so has part: feature:125794-125984:-1:exon
so has part: feature:124573-124833:-1:exon
so has part: feature:121939-124409:-1:exon

position:125984:-1
position: 125984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125794-125984:-1:exon

position:125794:-1
position: 125794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124573-124833:-1:exon

position:124573:-1
position: 124573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124833:-1
position: 124833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121939-124409:-1:exon

position:124409:-1
position: 124409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cldn12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: cldn12
product: claudin 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_023988600.1
SIO_010081: cldn12
subclass of: SO_0000673
so part of: cldn12
location: complement(join(122771..124409,124573..124828,125794..125987))
location: region:122771-125987:-1
so has part: feature:125794-125987:-1:exon
so has part: feature:124573-124828:-1:exon
so has part: feature:122771-124409:-1:exon

position:122771:-1
position: 122771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125794-125987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124573-124828:-1:exon

position:124828:-1
position: 124828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:122771-124409:-1:exon

cldn12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: cldn12
product: claudin 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_023988599.1
SIO_010081: cldn12
subclass of: SO_0000673
so part of: cldn12
location: complement(join(122771..124409,124573..124833,125527..125787))
location: region:122771-125787:-1
so has part: feature:125527-125787:-1:exon
so has part: feature:124573-124833:-1:exon
so has part: feature:122771-124409:-1:exon

position:125787:-1
position: 125787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125527-125787:-1:exon

position:125527:-1
position: 125527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124573-124833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122771-124409:-1:exon

cldn12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: cldn12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-12
translation: MSCRDIHATNAFSFIIAFICVGGIAVAALIPQWRVTRLVTFNKNAKNISVYDGLWAKCVKQDGYSGCYYYDSEWYSKVDQLDLRLLQFCLPTGLLFGSLALVLCMAGMSKTCCCSDKAETDIKSTRCLVNSAGCHLVAGMFLFLGGAIALAPSVWFLFRTKEMNIKYDRIFSDGFAVYVAIGCSGGLMLAALLMFMWYCMCKKLPSPFWLPLPTLPNSLSTQPLTANGYPPSPVYGPPQTFPPQGYVPTVMDAQPYAPSQGYPQSXAPLAQQVYMSQMSAPDGYGSEVGQNQAYSYAPSQSYAPSQVGYAPSYVGHRYSTRSRMSGIEIDIPVLTQGL
SIO_010081: cldn12
subclass of: SO_0000673
so part of: cldn12
location: complement(join(123612..124409,124573..124791))
location: region:123612-124791:-1
so has part: feature:124573-124791:-1:exon
so has part: feature:123612-124409:-1:exon

XP_023844366.1
type: Protein
SIO_000068: ncbiprotein

position:123612:-1
position: 123612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124791:-1
position: 124791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124573-124791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123612-124409:-1:exon

cldn12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: cldn12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-12
translation: MSCRDIHATNAFSFIIAFICVGGIAVAALIPQWRVTRLVTFNKNAKNISVYDGLWAKCVKQDGYSGCYYYDSEWYSKVDQLDLRLLQFCLPTGLLFGSLALVLCMAGMSKTCCCSDKAETDIKSTRCLVNSAGCHLVAGMFLFLGGAIALAPSVWFLFRTKEMNIKYDRIFSDGFAVYVAIGCSGGLMLAALLMFMWYCMCKKLPSPFWLPLPTLPNSLSTQPLTANGYPPSPVYGPPQTFPPQGYVPTVMDAQPYAPSQGYPQSXAPLAQQVYMSQMSAPDGYGSEVGQNQAYSYAPSQSYAPSQVGYAPSYVGHRYSTRSRMSGIEIDIPVLTQGL
SIO_010081: cldn12
subclass of: SO_0000673
so part of: cldn12
location: complement(join(123612..124409,124573..124791))
location: region:123612-124791:-1
so has part: feature:124573-124791:-1:exon
so has part: feature:123612-124409:-1:exon

XP_023844367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124573-124791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123612-124409:-1:exon

cldn12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: cldn12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-12
translation: MSCRDIHATNAFSFIIAFICVGGIAVAALIPQWRVTRLVTFNKNAKNISVYDGLWAKCVKQDGYSGCYYYDSEWYSKVDQLDLRLLQFCLPTGLLFGSLALVLCMAGMSKTCCCSDKAETDIKSTRCLVNSAGCHLVAGMFLFLGGAIALAPSVWFLFRTKEMNIKYDRIFSDGFAVYVAIGCSGGLMLAALLMFMWYCMCKKLPSPFWLPLPTLPNSLSTQPLTANGYPPSPVYGPPQTFPPQGYVPTVMDAQPYAPSQGYPQSXAPLAQQVYMSQMSAPDGYGSEVGQNQAYSYAPSQSYAPSQVGYAPSYVGHRYSTRSRMSGIEIDIPVLTQGL
SIO_010081: cldn12
subclass of: SO_0000673
so part of: cldn12
location: complement(join(123612..124409,124573..124791))
location: region:123612-124791:-1
so has part: feature:124573-124791:-1:exon
so has part: feature:123612-124409:-1:exon

XP_023844368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124573-124791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123612-124409:-1:exon

LOC111964758
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 126506..127358
location: region:126506-127358:1
so has part: feature:126506-127358:1:exon
subclass of: SO_0000011

111964758
type: Gene
SIO_000068: ncbigene

position:126506:1
position: 126506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127358:1
position: 127358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126506-127358:1:exon

LOC111964758
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964758
product: uncharacterized LOC111964758
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XR_002877436.1
SIO_010081: LOC111964758
subclass of: SO_0000673
so part of: LOC111964758
location: join(126506..126583,127283..127358)
location: region:126506-127358:1
so has part: feature:126506-126583:1:exon
so has part: feature:127283-127358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126506-126583:1:exon

position:126583:1
position: 126583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127283-127358:1:exon

position:127283:1
position: 127283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964807
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 131649..150149
location: region:131649-150149:1
so has part: feature:131649-150149:1:exon
subclass of: SO_0000011

111964807
type: Gene
SIO_000068: ncbigene

position:131649:1
position: 131649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150149:1
position: 150149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131649-150149:1:exon

LOC111964807
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964807
product: uncharacterized LOC111964807
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002877440.2
SIO_010081: LOC111964807
subclass of: SO_0000673
so part of: LOC111964807
location: join(131649..131667,145089..145140,149777..149876,150063..150149)
location: region:131649-150149:1
so has part: feature:131649-131667:1:exon
so has part: feature:145089-145140:1:exon
so has part: feature:149777-149876:1:exon
so has part: feature:150063-150149:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131649-131667:1:exon

position:131667:1
position: 131667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145089-145140:1:exon

position:145089:1
position: 145089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145140:1
position: 145140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:149777-149876:1:exon

position:149777:1
position: 149777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149876:1
position: 149876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150063-150149:1:exon

position:150063:1
position: 150063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964806
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134833..140036
location: region:134833-140036:1
so has part: feature:134833-140036:1:exon
subclass of: SO_0000010

111964806
type: Gene
SIO_000068: ncbigene

position:134833:1
position: 134833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140036:1
position: 140036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134833-140036:1:exon

LOC111964806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964806
product: disintegrin and metalloproteinase domain-containing protein 22-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_023988601.1
SIO_010081: LOC111964806
subclass of: SO_0000673
so part of: LOC111964806
location: join(134833..134902,135995..136161,139934..140036)
location: region:134833-140036:1
so has part: feature:134833-134902:1:exon
so has part: feature:135995-136161:1:exon
so has part: feature:139934-140036:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134833-134902:1:exon

position:134902:1
position: 134902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135995-136161:1:exon

position:135995:1
position: 135995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136161:1
position: 136161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139934-140036:1:exon

position:139934:1
position: 139934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 22-like
translation: MADMIFKEQLNTRIVLVAMETWAADNRFNIDDDPMVTLREFMKYRRDFIKEKCDSVHLFSGTGSIAAGEELPIWEESVL
SIO_010081: LOC111964806
subclass of: SO_0000673
so part of: LOC111964806
location: join(134891..134902,135995..136161,139934..139994)
location: region:134891-139994:1
so has part: feature:134891-134902:1:exon
so has part: feature:135995-136161:1:exon
so has part: feature:139934-139994:1:exon

XP_023844369.1
type: Protein
SIO_000068: ncbiprotein

position:134891:1
position: 134891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139994:1
position: 139994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134891-134902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135995-136161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139934-139994:1:exon

LOC111964809
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 154222..167073
location: region:154222-167073:1
so has part: feature:154222-167073:1:exon
subclass of: SO_0000010

111964809
type: Gene
SIO_000068: ncbigene

position:154222:1
position: 154222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167073:1
position: 167073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154222-167073:1:exon

LOC111964809
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964809
product: disintegrin and metalloproteinase domain-containing protein 22-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_023988604.1
SIO_010081: LOC111964809
subclass of: SO_0000673
so part of: LOC111964809
location: join(154222..154674,154795..154848,155035..155235,156107..156207,156312..156378,156804..156923,164057..167073)
location: region:154222-167073:1
so has part: feature:154222-154674:1:exon
so has part: feature:154795-154848:1:exon
so has part: feature:155035-155235:1:exon
so has part: feature:156107-156207:1:exon
so has part: feature:156312-156378:1:exon
so has part: feature:156804-156923:1:exon
so has part: feature:164057-167073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154222-154674:1:exon

position:154674:1
position: 154674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154795-154848:1:exon

position:154795:1
position: 154795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154848:1
position: 154848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155035-155235:1:exon

position:155035:1
position: 155035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155235:1
position: 155235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156107-156207:1:exon

position:156107:1
position: 156107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156207:1
position: 156207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156312-156378:1:exon

position:156312:1
position: 156312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156378:1
position: 156378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:156804-156923:1:exon

position:156804:1
position: 156804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156923:1
position: 156923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164057-167073:1:exon

position:164057:1
position: 164057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964809
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964809
product: disintegrin and metalloproteinase domain-containing protein 22-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_023988605.1
SIO_010081: LOC111964809
subclass of: SO_0000673
so part of: LOC111964809
location: join(154238..154674,154795..154848,155035..155142,156107..156207,156312..156378,156804..156923,164057..167073)
location: region:154238-167073:1
so has part: feature:154238-154674:1:exon
so has part: feature:154795-154848:1:exon
so has part: feature:155035-155142:1:exon
so has part: feature:156107-156207:1:exon
so has part: feature:156312-156378:1:exon
so has part: feature:156804-156923:1:exon
so has part: feature:164057-167073:1:exon

position:154238:1
position: 154238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154238-154674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154795-154848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155035-155142:1:exon

position:155142:1
position: 155142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156107-156207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156312-156378:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156804-156923:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164057-167073:1:exon

LOC111964809
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 22-like isoform X1
translation: MPPGDYVKKPGDADSFYSDLAPGVSTNSGCSSKKRSGCLSNLQIYTLSFPPSIASISQNISLFAFRSNGLSHSWSERIPDAKHISDICENGRPRSNSWQGNLSGNRKKSKGKKFRPRSNSTETLSRRSRPPPPRVHCIHRGTLTPCLPSPTTRGRPTGRVPGCGRLQYNTPVIYSAKLLKNYIFVHFSMN
SIO_010081: LOC111964809
subclass of: SO_0000673
so part of: LOC111964809
location: join(155039..155235,156107..156207,156312..156378,156804..156923,164057..164144)
location: region:155039-164144:1
so has part: feature:155039-155235:1:exon
so has part: feature:156107-156207:1:exon
so has part: feature:156312-156378:1:exon
so has part: feature:156804-156923:1:exon
so has part: feature:164057-164144:1:exon

XP_023844372.1
type: Protein
SIO_000068: ncbiprotein

position:155039:1
position: 155039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164144:1
position: 164144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155039-155235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156107-156207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156312-156378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156804-156923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164057-164144:1:exon

LOC111964809
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 22-like isoform X2
translation: MPPGDYVKKPGDADSFYSDLAPGVSTNSGCSSKKRSNGLSHSWSERIPDAKHISDICENGRPRSNSWQGNLSGNRKKSKGKKFRPRSNSTETLSRRSRPPPPRVHCIHRGTLTPCLPSPTTRGRPTGRVPGCGRLQYNTPVIYSAKLLKNYIFVHFSMN
SIO_010081: LOC111964809
subclass of: SO_0000673
so part of: LOC111964809
location: join(155039..155142,156107..156207,156312..156378,156804..156923,164057..164144)
location: region:155039-164144:1
so has part: feature:155039-155142:1:exon
so has part: feature:156107-156207:1:exon
so has part: feature:156312-156378:1:exon
so has part: feature:156804-156923:1:exon
so has part: feature:164057-164144:1:exon

XP_023844373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155039-155142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156107-156207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156312-156378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156804-156923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164057-164144:1:exon

gtpbp10
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: gtpbp10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(168492..171675)
location: region:168492-171675:-1
so has part: feature:168492-171675:-1:exon
subclass of: SO_0000010

111964808
type: Gene
SIO_000068: ncbigene

position:168492:-1
position: 168492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171675:-1
position: 171675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168492-171675:-1:exon

gtpbp10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: gtpbp10
product: GTP binding protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023988602.1
SIO_010081: gtpbp10
subclass of: SO_0000673
so part of: gtpbp10
location: complement(join(168492..169161,169266..169389,169525..169602,169713..169820,170011..170063,170214..170287,170401..170545,170684..170775,170953..171146,171543..171675))
location: region:168492-171675:-1
so has part: feature:171543-171675:-1:exon
so has part: feature:170953-171146:-1:exon
so has part: feature:170684-170775:-1:exon
so has part: feature:170401-170545:-1:exon
so has part: feature:170214-170287:-1:exon
so has part: feature:170011-170063:-1:exon
so has part: feature:169713-169820:-1:exon
so has part: feature:169525-169602:-1:exon
so has part: feature:169266-169389:-1:exon
so has part: feature:168492-169161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171543-171675:-1:exon

position:171543:-1
position: 171543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170953-171146:-1:exon

position:170953:-1
position: 170953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171146:-1
position: 171146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:170684-170775:-1:exon

position:170684:-1
position: 170684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170775:-1
position: 170775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170401-170545:-1:exon

position:170401:-1
position: 170401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170545:-1
position: 170545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170214-170287:-1:exon

position:170214:-1
position: 170214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170287:-1
position: 170287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170011-170063:-1:exon

position:170011:-1
position: 170011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170063:-1
position: 170063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169713-169820:-1:exon

position:169713:-1
position: 169713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169820:-1
position: 169820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169525-169602:-1:exon

position:169525:-1
position: 169525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169602:-1
position: 169602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:169266-169389:-1:exon

position:169266:-1
position: 169266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169389:-1
position: 169389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:168492-169161:-1:exon

position:169161:-1
position: 169161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gtpbp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: gtpbp10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein 10
translation: MVWISRICYRKYGNFVDNLRLYVRGGSGGMGLPRLGGQGGKGGDVWVVAQKEMTLKRVKDKSPQKRFIAGVGTNSSVRALRGQKGEDQEVMAPPGITVTNDDGKVLGKLNTEGDRVLVARGGQGGSYHSEFLPSKGQTRQIRLDLKLIADLGLVGFPNAGKSSLLTALSHAKPQIASYAFTTLRPEIGKVMYEDHKQISVADLPGLIEGAHMNRGMGHQFLKHVERTRQLLFVVDVCGFQLASKTPFRSAFEAVQLLIKELELYKEDLPCKPAVLVVNKMDLPDAEDKLTELQEQLLNPHEFSHLLPDDMLPKNNMVFRHVVPISAATGFGIAHLKTCIRQSLDKDASYGNADPCTVIGYRR
SIO_010081: gtpbp10
subclass of: SO_0000673
so part of: gtpbp10
location: complement(join(168974..169161,169266..169389,169525..169602,169713..169820,170011..170063,170214..170287,170401..170545,170684..170775,170953..171146,171543..171575))
location: region:168974-171575:-1
so has part: feature:171543-171575:-1:exon
so has part: feature:170953-171146:-1:exon
so has part: feature:170684-170775:-1:exon
so has part: feature:170401-170545:-1:exon
so has part: feature:170214-170287:-1:exon
so has part: feature:170011-170063:-1:exon
so has part: feature:169713-169820:-1:exon
so has part: feature:169525-169602:-1:exon
so has part: feature:169266-169389:-1:exon
so has part: feature:168974-169161:-1:exon

XP_023844370.1
type: Protein
SIO_000068: ncbiprotein

position:168974:-1
position: 168974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171575:-1
position: 171575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171543-171575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170953-171146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170684-170775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170401-170545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170214-170287:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170011-170063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169713-169820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169525-169602:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169266-169389:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168974-169161:-1:exon

LOC111964705
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(173851..174712)
location: region:173851-174712:-1
so has part: feature:173851-174712:-1:exon
subclass of: SO_0000010

111964705
type: Gene
SIO_000068: ncbigene

position:173851:-1
position: 173851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174712:-1
position: 174712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173851-174712:-1:exon

LOC111964705
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964705
product: complement C1q-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023988540.1
SIO_010081: LOC111964705
subclass of: SO_0000673
so part of: LOC111964705
location: complement(join(173851..174259,174544..174712))
location: region:173851-174712:-1
so has part: feature:174544-174712:-1:exon
so has part: feature:173851-174259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174544-174712:-1:exon

position:174544:-1
position: 174544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173851-174259:-1:exon

position:174259:-1
position: 174259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q-like protein 2
translation: MYVSCVLKDRPKLAFSAGLTNSGKVGPFNTETKLIYTKVFTNIGNTYNPHTGIFTAPVRGVYYFRFSMVSYETALLGGLNMYRNGQRILHNGQYYNAGNEYVCNGVTLHLQKGDTVHMRLPNGWAVYDDDSNHSTFSGFLLFPM
SIO_010081: LOC111964705
subclass of: SO_0000673
so part of: LOC111964705
location: complement(join(173979..174259,174544..174697))
location: region:173979-174697:-1
so has part: feature:174544-174697:-1:exon
so has part: feature:173979-174259:-1:exon

XP_023844308.1
type: Protein
SIO_000068: ncbiprotein

position:173979:-1
position: 173979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174697:-1
position: 174697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174544-174697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173979-174259:-1:exon

osgin2
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: osgin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 178901..186553
location: region:178901-186553:1
so has part: feature:178901-186553:1:exon
subclass of: SO_0000010

111964811
type: Gene
SIO_000068: ncbigene

position:178901:1
position: 178901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186553:1
position: 186553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178901-186553:1:exon

osgin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: osgin2
product: oxidative stress induced growth inhibitor family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988607.2
SIO_010081: osgin2
subclass of: SO_0000673
so part of: osgin2
location: join(178901..179303,182503..182597,182762..182898,183017..183208,183412..183506,183972..183993,184139..184241,184330..186553)
location: region:178901-186553:1
so has part: feature:178901-179303:1:exon
so has part: feature:182503-182597:1:exon
so has part: feature:182762-182898:1:exon
so has part: feature:183017-183208:1:exon
so has part: feature:183412-183506:1:exon
so has part: feature:183972-183993:1:exon
so has part: feature:184139-184241:1:exon
so has part: feature:184330-186553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178901-179303:1:exon

position:179303:1
position: 179303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182503-182597:1:exon

position:182503:1
position: 182503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182597:1
position: 182597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182762-182898:1:exon

position:182762:1
position: 182762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182898:1
position: 182898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183017-183208:1:exon

position:183017:1
position: 183017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183208:1
position: 183208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:183412-183506:1:exon

position:183412:1
position: 183412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183506:1
position: 183506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183972-183993:1:exon

position:183972:1
position: 183972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183993:1
position: 183993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:184139-184241:1:exon

position:184139:1
position: 184139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184241:1
position: 184241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:184330-186553:1:exon

position:184330:1
position: 184330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

osgin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: osgin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-induced growth inhibitor 2
translation: MPLLEETTVPREHPPTLPVVIIGNGPSGICLSYLLSGYKPYLDPSAVHPNPVLYRKLQETRHLPITEQDLEYLSEGLEGRSGNPVAVLFDTLLHPNADFGYEFPPVLQWRRDKQQHLPHLVLGRATPGGAWHVMEGSMLTISLGIWMELPGINYRDLTNNGKCRMERDREMPEEISSYYRNYVKLMGLKQNFVDNTYVTSVQKLFHEEEGGGLWEVRGYQRVQGDTHVPFCLFSENVVLATGASDSPAQLGVEGEELPFVFHSISALGLAVSRKKLGPNSDPVLIVGAGLSAADAVLCACNNNISVLHAFRKHVDDPGLIFKQLPKTLYPEYHKVYHMMHSQTHATPNMAATSTTNALPSMAASVCSKMCSKPQPTTTNMATSGGPXLFPDYTSFPEHCVVSFQPDMKCVLQGSNSLKAFKISMALVLXGTHPNLFFLNGQGQYLGLDPTKPISCKQKPVDVHPYTFECTKDPGLFAMGPLVGDNFVRFLKGGALGIASCLLKRLKKKGKLIAEGGGVGGGEFI
SIO_010081: osgin2
subclass of: SO_0000673
so part of: osgin2
location: join(182531..182597,182762..182898,183017..183208,183412..183506,183972..183993,184139..184241,184330..185288)
location: region:182531-185288:1
so has part: feature:182531-182597:1:exon
so has part: feature:182762-182898:1:exon
so has part: feature:183017-183208:1:exon
so has part: feature:183412-183506:1:exon
so has part: feature:183972-183993:1:exon
so has part: feature:184139-184241:1:exon
so has part: feature:184330-185288:1:exon

XP_023844375.1
type: Protein
SIO_000068: ncbiprotein

position:182531:1
position: 182531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185288:1
position: 185288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182531-182597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182762-182898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183017-183208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183412-183506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183972-183993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:184139-184241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:184330-185288:1:exon

nbn
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: nbn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(187221..206307)
location: region:187221-206307:-1
so has part: feature:187221-206307:-1:exon
subclass of: SO_0000010

111964810
type: Gene
SIO_000068: ncbigene

position:187221:-1
position: 187221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206307:-1
position: 206307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187221-206307:-1:exon

nbn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: nbn
product: nibrin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_023988606.2
SIO_010081: nbn
subclass of: SO_0000673
so part of: nbn
location: complement(join(187221..188173,189456..189505,189763..189876,189978..190119,190885..190956,191233..191863,191965..192142,192271..192479,192568..192706,192835..192935,193182..193372,204233..204350,204573..204676,204766..204925,205011..205138,205545..205666,206112..206307))
location: region:187221-206307:-1
so has part: feature:206112-206307:-1:exon
so has part: feature:205545-205666:-1:exon
so has part: feature:205011-205138:-1:exon
so has part: feature:204766-204925:-1:exon
so has part: feature:204573-204676:-1:exon
so has part: feature:204233-204350:-1:exon
so has part: feature:193182-193372:-1:exon
so has part: feature:192835-192935:-1:exon
so has part: feature:192568-192706:-1:exon
so has part: feature:192271-192479:-1:exon
so has part: feature:191965-192142:-1:exon
so has part: feature:191233-191863:-1:exon
so has part: feature:190885-190956:-1:exon
so has part: feature:189978-190119:-1:exon
so has part: feature:189763-189876:-1:exon
so has part: feature:189456-189505:-1:exon
so has part: feature:187221-188173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206112-206307:-1:exon

position:206112:-1
position: 206112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205545-205666:-1:exon

position:205545:-1
position: 205545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205666:-1
position: 205666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205011-205138:-1:exon

position:205011:-1
position: 205011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205138:-1
position: 205138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204766-204925:-1:exon

position:204766:-1
position: 204766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204925:-1
position: 204925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:204573-204676:-1:exon

position:204573:-1
position: 204573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204676:-1
position: 204676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:204233-204350:-1:exon

position:204233:-1
position: 204233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204350:-1
position: 204350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:193182-193372:-1:exon

position:193182:-1
position: 193182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193372:-1
position: 193372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:192835-192935:-1:exon

position:192835:-1
position: 192835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192935:-1
position: 192935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:192568-192706:-1:exon

position:192568:-1
position: 192568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192706:-1
position: 192706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:192271-192479:-1:exon

position:192271:-1
position: 192271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192479:-1
position: 192479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:191965-192142:-1:exon

position:191965:-1
position: 191965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192142:-1
position: 192142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:191233-191863:-1:exon

position:191233:-1
position: 191233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191863:-1
position: 191863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:190885-190956:-1:exon

position:190885:-1
position: 190885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190956:-1
position: 190956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:189978-190119:-1:exon

position:189978:-1
position: 189978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190119:-1
position: 190119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:189763-189876:-1:exon

position:189763:-1
position: 189763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189876:-1
position: 189876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:189456-189505:-1:exon

position:189456:-1
position: 189456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189505:-1
position: 189505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:187221-188173:-1:exon

position:188173:-1
position: 188173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nbn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: nbn
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nibrin
translation: MWTLNPLESGGVTHYLLPDKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSKYGTFVNEERLSGXTPRSLTAGDRVTFGVFHSKFSVQQVTAVVCSSCVDNEGKVSLSQTLQLLGGRLTNTWKQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTKALQQKQPPPKAESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLEEGSVPVSLLESPLSCVIGMATGNSQALLPHSTKKWADSVGKILQRKGLRFITESEIGLAAIYVSCDKYCNPSNQMADSESMRMKPTIPGATLSQNAPVDETVMPAASQNITAYAVNTEPSQGISGVDVAGVSAVGETPERDQSRXTSHLNRSKPSGRELAGTCTVAETMMSSFSASDSAGGGGSDRKXGELQHPGGXKGDAITRFLATAPRTNGGVQTMSPQKRSSQKQQVSQKGSPQKQSALTNFFQPVGKKRPREGEESPTVQSEAKLSRREEDKEKMKRTVPQHSETSNSTHPPTGRSQGQHSSGAHLFPGQTEALSEGFSNPAQQGLQSRKRKEMEEETKGGGASEIEMXELESIMSEDMEESDEPMSASQGQRLKLTEQSSTNQGQRSQLXDKSSTNRKQLLETVELTSANKKQRVYPVEPIAANHRSGLDXEERSSASRRQQAEPVAEVXDEEVSFIESKPVNGVTPGHLEEPETDVKQEASGLGVRLPSRLIGVEFKSLTGQHXARPKPRPMETHGNVNRKDFKRFRKVPVPGAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPTKKR
SIO_010081: nbn
subclass of: SO_0000673
so part of: nbn
location: complement(join(188143..188173,189456..189505,189763..189876,189978..190119,190885..190956,191233..191863,191965..192142,192271..192479,192568..192706,192835..192935,193182..193372,204233..204350,204573..204676,204766..204925,205011..205138,205545..205666,206112..206142))
location: region:188143-206142:-1
so has part: feature:206112-206142:-1:exon
so has part: feature:205545-205666:-1:exon
so has part: feature:205011-205138:-1:exon
so has part: feature:204766-204925:-1:exon
so has part: feature:204573-204676:-1:exon
so has part: feature:204233-204350:-1:exon
so has part: feature:193182-193372:-1:exon
so has part: feature:192835-192935:-1:exon
so has part: feature:192568-192706:-1:exon
so has part: feature:192271-192479:-1:exon
so has part: feature:191965-192142:-1:exon
so has part: feature:191233-191863:-1:exon
so has part: feature:190885-190956:-1:exon
so has part: feature:189978-190119:-1:exon
so has part: feature:189763-189876:-1:exon
so has part: feature:189456-189505:-1:exon
so has part: feature:188143-188173:-1:exon

XP_023844374.1
type: Protein
SIO_000068: ncbiprotein

position:188143:-1
position: 188143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206142:-1
position: 206142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206112-206142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205545-205666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205011-205138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204766-204925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204573-204676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204233-204350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193182-193372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:192835-192935:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192568-192706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192271-192479:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191965-192142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:191233-191863:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190885-190956:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:189978-190119:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:189763-189876:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:189456-189505:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188143-188173:-1:exon

LOC111964812
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(224544..225594)
location: region:224544-225594:-1
so has part: feature:224544-225594:-1:exon
subclass of: SO_0000011

111964812
type: Gene
SIO_000068: ncbigene

position:224544:-1
position: 224544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225594:-1
position: 225594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224544-225594:-1:exon

LOC111964812
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964812
product: uncharacterized LOC111964812
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XR_002877441.1
SIO_010081: LOC111964812
subclass of: SO_0000673
so part of: LOC111964812
location: complement(join(224544..225009,225426..225594))
location: region:224544-225594:-1
so has part: feature:225426-225594:-1:exon
so has part: feature:224544-225009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225426-225594:-1:exon

position:225426:-1
position: 225426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224544-225009:-1:exon

position:225009:-1
position: 225009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964814
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 227683..240787
location: region:227683-240787:1
so has part: feature:227683-240787:1:exon
subclass of: SO_0000010

111964814
type: Gene
SIO_000068: ncbigene

position:227683:1
position: 227683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240787:1
position: 240787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227683-240787:1:exon

LOC111964814
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964814
product: restin homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_023988615.1
SIO_010081: LOC111964814
subclass of: SO_0000673
so part of: LOC111964814
location: join(227683..227824,230834..231134,239764..239818,240266..240383,240572..240787)
location: region:227683-240787:1
so has part: feature:227683-227824:1:exon
so has part: feature:230834-231134:1:exon
so has part: feature:239764-239818:1:exon
so has part: feature:240266-240383:1:exon
so has part: feature:240572-240787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227683-227824:1:exon

position:227824:1
position: 227824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230834-231134:1:exon

position:230834:1
position: 230834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231134:1
position: 231134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239764-239818:1:exon

position:239764:1
position: 239764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239818:1
position: 239818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240266-240383:1:exon

position:240266:1
position: 240266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240383:1
position: 240383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240572-240787:1:exon

position:240572:1
position: 240572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964814
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964814
product: restin homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_023988614.1
SIO_010081: LOC111964814
subclass of: SO_0000673
so part of: LOC111964814
location: join(227683..227824,230834..231071,231168..231230,239764..239818,240266..240383,240572..240787)
location: region:227683-240787:1
so has part: feature:227683-227824:1:exon
so has part: feature:230834-231071:1:exon
so has part: feature:231168-231230:1:exon
so has part: feature:239764-239818:1:exon
so has part: feature:240266-240383:1:exon
so has part: feature:240572-240787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227683-227824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230834-231071:1:exon

position:231071:1
position: 231071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231168-231230:1:exon

position:231168:1
position: 231168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231230:1
position: 231230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239764-239818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240266-240383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240572-240787:1:exon

LOC111964814
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964814
product: restin homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_023988616.1
SIO_010081: LOC111964814
subclass of: SO_0000673
so part of: LOC111964814
location: join(227683..227824,230837..231071,231168..231230,239764..239818,240266..240383,240572..240787)
location: region:227683-240787:1
so has part: feature:227683-227824:1:exon
so has part: feature:230837-231071:1:exon
so has part: feature:231168-231230:1:exon
so has part: feature:239764-239818:1:exon
so has part: feature:240266-240383:1:exon
so has part: feature:240572-240787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227683-227824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230837-231071:1:exon

position:230837:1
position: 230837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231168-231230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239764-239818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240266-240383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240572-240787:1:exon

LOC111964814
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: restin homolog isoform X2
translation: MQNGHQHSGIQGNINVKSSMRAVSALVFLAVGVMVVLIYQAVRQELTLRGLKARALESSSQVKQKENDIVQVKMKIQKLNGELEPINTKRDELTKKKEQSAKATGEADKSLKTCHTEKADAEKKKTDASAALQKVKDXQEAQKKKAQEEIQALKQQILERDKALCAFVDQTNEEGRKLCGITEAPK
SIO_010081: LOC111964814
subclass of: SO_0000673
so part of: LOC111964814
location: join(227772..227824,230834..231134,239764..239818,240266..240383,240572..240605)
location: region:227772-240605:1
so has part: feature:227772-227824:1:exon
so has part: feature:230834-231134:1:exon
so has part: feature:239764-239818:1:exon
so has part: feature:240266-240383:1:exon
so has part: feature:240572-240605:1:exon

XP_023844383.1
type: Protein
SIO_000068: ncbiprotein

position:227772:1
position: 227772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240605:1
position: 240605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227772-227824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230834-231134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239764-239818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240266-240383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240572-240605:1:exon

LOC111964814
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: restin homolog isoform X1
translation: MQNGHQHSGIQGNINVKSSMRAVSALVFLAVGVMVVLIYQAVRQELTLRGLKARALESSSQVKQKENDIVQVKMKIQKLNGELEPINTKRDELTKKKEQSAKATGEADKSLKTCHTEKADAEKKKTDASAALQKVKDXQEAQKKKAQEEIQALKQQILERDKALCAFVDQTNEEGRKLCGITEAPK
SIO_010081: LOC111964814
subclass of: SO_0000673
so part of: LOC111964814
location: join(227772..227824,230834..231071,231168..231230,239764..239818,240266..240383,240572..240605)
location: region:227772-240605:1
so has part: feature:227772-227824:1:exon
so has part: feature:230834-231071:1:exon
so has part: feature:231168-231230:1:exon
so has part: feature:239764-239818:1:exon
so has part: feature:240266-240383:1:exon
so has part: feature:240572-240605:1:exon

XP_023844382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227772-227824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230834-231071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231168-231230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239764-239818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240266-240383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240572-240605:1:exon

LOC111964814
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: restin homolog isoform X3
translation: MQNGHQHSGIQGNINVKSMRAVSALVFLAVGVMVVLIYQAVRQELTLRGLKARALESSSQVKQKENDIVQVKMKIQKLNGELEPINTKRDELTKKKEQSAKATGEADKSLKTCHTEKADAEKKKTDASAALQKVKDXQEAQKKKAQEEIQALKQQILERDKALCAFVDQTNEEGRKLCGITEAPK
SIO_010081: LOC111964814
subclass of: SO_0000673
so part of: LOC111964814
location: join(227772..227824,230837..231071,231168..231230,239764..239818,240266..240383,240572..240605)
location: region:227772-240605:1
so has part: feature:227772-227824:1:exon
so has part: feature:230837-231071:1:exon
so has part: feature:231168-231230:1:exon
so has part: feature:239764-239818:1:exon
so has part: feature:240266-240383:1:exon
so has part: feature:240572-240605:1:exon

XP_023844384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227772-227824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230837-231071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231168-231230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239764-239818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240266-240383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240572-240605:1:exon

lg6.1h1orf189
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: lg6.1h1orf189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(242172..246319)
location: region:242172-246319:-1
so has part: feature:242172-246319:-1:exon
subclass of: SO_0000010

111964815
type: Gene
SIO_000068: ncbigene

position:242172:-1
position: 242172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246319:-1
position: 246319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242172-246319:-1:exon

lg6.1h1orf189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lg6.1h1orf189
product: linkage group 6.1 C1orf189 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_023988617.1
SIO_010081: lg6.1h1orf189
subclass of: SO_0000673
so part of: lg6.1h1orf189
location: complement(join(242172..242530,245559..245685,245877..245917,246021..246090,246230..246319))
location: region:242172-246319:-1
so has part: feature:246230-246319:-1:exon
so has part: feature:246021-246090:-1:exon
so has part: feature:245877-245917:-1:exon
so has part: feature:245559-245685:-1:exon
so has part: feature:242172-242530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246230-246319:-1:exon

position:246230:-1
position: 246230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246021-246090:-1:exon

position:246021:-1
position: 246021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246090:-1
position: 246090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245877-245917:-1:exon

position:245877:-1
position: 245877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245917:-1
position: 245917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:245559-245685:-1:exon

position:245559:-1
position: 245559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245685:-1
position: 245685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:242172-242530:-1:exon

position:242530:-1
position: 242530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lg6.1h1orf189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: lg6.1h1orf189
product: linkage group 6.1 C1orf189 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_023988618.1
SIO_010081: lg6.1h1orf189
subclass of: SO_0000673
so part of: lg6.1h1orf189
location: complement(join(242172..242530,245559..245685,245877..245913,246021..246223))
location: region:242172-246223:-1
so has part: feature:246021-246223:-1:exon
so has part: feature:245877-245913:-1:exon
so has part: feature:245559-245685:-1:exon
so has part: feature:242172-242530:-1:exon

position:246223:-1
position: 246223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246021-246223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245877-245913:-1:exon

position:245913:-1
position: 245913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245559-245685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242172-242530:-1:exon

lg6.1h1orf189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: lg6.1h1orf189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf189 homolog isoform X1
translation: MFGCEERRSKNKRVQRARDRIKKDGEMTNRIAELDSICGVMQKAEFEVSTQAGSMKTLKLRELTQQRETELGKAALTMVRRAALQALLEHERQQYIIELNRLGKTIYKQRV
SIO_010081: lg6.1h1orf189
subclass of: SO_0000673
so part of: lg6.1h1orf189
location: complement(join(242429..242530,245559..245685,245877..245917,246021..246086))
location: region:242429-246086:-1
so has part: feature:246021-246086:-1:exon
so has part: feature:245877-245917:-1:exon
so has part: feature:245559-245685:-1:exon
so has part: feature:242429-242530:-1:exon

XP_023844385.1
type: Protein
SIO_000068: ncbiprotein

position:242429:-1
position: 242429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246086:-1
position: 246086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246021-246086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245877-245917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245559-245685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242429-242530:-1:exon

lg6.1h1orf189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: lg6.1h1orf189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf189 homolog isoform X2
translation: MTNRIAELDSICGVMQKAEFEVSTQAGSMKTLKLRELTQQRETELGKAALTMVRRAALQALLEHERQQYIIELNRLGKTIYKQRV
SIO_010081: lg6.1h1orf189
subclass of: SO_0000673
so part of: lg6.1h1orf189
location: complement(join(242429..242530,245559..245685,245877..245905))
location: region:242429-245905:-1
so has part: feature:245877-245905:-1:exon
so has part: feature:245559-245685:-1:exon
so has part: feature:242429-242530:-1:exon

XP_023844386.1
type: Protein
SIO_000068: ncbiprotein

position:245905:-1
position: 245905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245877-245905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245559-245685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242429-242530:-1:exon

LOC111964813
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 246369..249157
location: region:246369-249157:1
so has part: feature:246369-249157:1:exon
subclass of: SO_0000010

111964813
type: Gene
SIO_000068: ncbigene

position:246369:1
position: 246369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249157:1
position: 249157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246369-249157:1:exon

LOC111964813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964813
product: acyl-coenzyme A thioesterase THEM4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_023988610.1
SIO_010081: LOC111964813
subclass of: SO_0000673
so part of: LOC111964813
location: join(246369..246446,246714..246862,247208..247397,247616..247736,247998..249157)
location: region:246369-249157:1
so has part: feature:246369-246446:1:exon
so has part: feature:246714-246862:1:exon
so has part: feature:247208-247397:1:exon
so has part: feature:247616-247736:1:exon
so has part: feature:247998-249157:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246369-246446:1:exon

position:246446:1
position: 246446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246714-246862:1:exon

position:246714:1
position: 246714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246862:1
position: 246862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247208-247397:1:exon

position:247208:1
position: 247208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247397:1
position: 247397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:247616-247736:1:exon

position:247616:1
position: 247616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247736:1
position: 247736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:247998-249157:1:exon

position:247998:1
position: 247998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964813
product: acyl-coenzyme A thioesterase THEM4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_023988608.1
SIO_010081: LOC111964813
subclass of: SO_0000673
so part of: LOC111964813
location: join(246380..246862,247208..247397,247616..247736,247998..249157)
location: region:246380-249157:1
so has part: feature:246380-246862:1:exon
so has part: feature:247208-247397:1:exon
so has part: feature:247616-247736:1:exon
so has part: feature:247998-249157:1:exon

position:246380:1
position: 246380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246380-246862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247208-247397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247616-247736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247998-249157:1:exon

LOC111964813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964813
product: acyl-coenzyme A thioesterase THEM4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_023988609.1
SIO_010081: LOC111964813
subclass of: SO_0000673
so part of: LOC111964813
location: join(246382..246862,247208..247397,247616..247789,247998..249157)
location: region:246382-249157:1
so has part: feature:246382-246862:1:exon
so has part: feature:247208-247397:1:exon
so has part: feature:247616-247789:1:exon
so has part: feature:247998-249157:1:exon

position:246382:1
position: 246382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246382-246862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247208-247397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247616-247789:1:exon

position:247789:1
position: 247789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:247998-249157:1:exon

LOC111964813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964813
product: acyl-coenzyme A thioesterase THEM4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_023988613.2
SIO_010081: LOC111964813
subclass of: SO_0000673
so part of: LOC111964813
location: join(246602..246862,247208..247397,247616..247732,247998..249157)
location: region:246602-249157:1
so has part: feature:246602-246862:1:exon
so has part: feature:247208-247397:1:exon
so has part: feature:247616-247732:1:exon
so has part: feature:247998-249157:1:exon

position:246602:1
position: 246602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246602-246862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247208-247397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247616-247732:1:exon

position:247732:1
position: 247732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:247998-249157:1:exon

LOC111964813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111964813 isoform X1
translation: MIRTGVQQMARGLCQIMGREISKGNFNTNIRQQMTPRGTFQLPWSSINSVRTMAVLPWPFSFQPRDFSLPNXSWGSDMRRLYEHYNSQCEVETDDGEKKWGVWRRLPSYNRSLKYATGGVYLSKIIQSKARLFTRNIREYGGTFEYVVFVNKQEQKCVAVSVNHNGTPIRRMMDRPTHRPTRRYKHTSETALTS
SIO_010081: LOC111964813
subclass of: SO_0000673
so part of: LOC111964813
location: join(246701..246862,247208..247397,247616..247736,247998..248109)
location: region:246701-248109:1
so has part: feature:246701-246862:1:exon
so has part: feature:247208-247397:1:exon
so has part: feature:247616-247736:1:exon
so has part: feature:247998-248109:1:exon

XP_023844376.1
type: Protein
SIO_000068: ncbiprotein

position:246701:1
position: 246701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248109:1
position: 248109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246701-246862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247208-247397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247616-247736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247998-248109:1:exon

LOC111964813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-coenzyme A thioesterase THEM4 isoform X2
translation: MIRTGVQQMARGLCQIMGREISKGNFNTNIRQQMTPRGTFQLPWSSINSVRTMAVLPWPFSFQPRDFSLPNXSWGSDMRRLYEHYNSQCEVETDDGEKKWGVWRRLPSYNRSLKYATGGVYLSKIIQSKARLFTRNIREYGGTFEYVVFVNKQEQKCVCVFQAGHLLEGVSPTLTWLFLSITMGHLLGG
SIO_010081: LOC111964813
subclass of: SO_0000673
so part of: LOC111964813
location: join(246701..246862,247208..247397,247616..247789,247998..248041)
location: region:246701-248041:1
so has part: feature:246701-246862:1:exon
so has part: feature:247208-247397:1:exon
so has part: feature:247616-247789:1:exon
so has part: feature:247998-248041:1:exon

XP_023844377.1
type: Protein
SIO_000068: ncbiprotein

position:248041:1
position: 248041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246701-246862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247208-247397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247616-247789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247998-248041:1:exon

LOC111964813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-coenzyme A thioesterase THEM4 isoform X4
translation: MIRTGVQQMARGLCQIMGREISKGNFNTNIRQQMTPRGTFQLPWSSINSVRTMAVLPWPFSFQPRDFSLPNXSWGSDMRRLYEHYNSQCEVETDDGEKKWGVWRRLPSYNRSLKYATGGVYLSKIIQSKARLFTRNIREYGGTFEYVVFVNKQEQKWLFLSITMGHLLGG
SIO_010081: LOC111964813
subclass of: SO_0000673
so part of: LOC111964813
location: join(246701..246862,247208..247397,247616..247732,247998..248041)
location: region:246701-248041:1
so has part: feature:246701-246862:1:exon
so has part: feature:247208-247397:1:exon
so has part: feature:247616-247732:1:exon
so has part: feature:247998-248041:1:exon

XP_023844381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246701-246862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247208-247397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247616-247732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247998-248041:1:exon

LOC111964813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111964813 isoform X3
translation: MARGLCQIMGREISKGNFNTNIRQQMTPRGTFQLPWSSINSVRTMAVLPWPFSFQPRDFSLPNXSWGSDMRRLYEHYNSQCEVETDDGEKKWGVWRRLPSYNRSLKYATGGVYLSKIIQSKARLFTRNIREYGGTFEYVVFVNKQEQKCVAVSVNHNGTPIRRMMDRPTHRPTRRYKHTSETALTS
SIO_010081: LOC111964813
subclass of: SO_0000673
so part of: LOC111964813
location: join(246725..246862,247208..247397,247616..247736,247998..248109)
location: region:246725-248109:1
so has part: feature:246725-246862:1:exon
so has part: feature:247208-247397:1:exon
so has part: feature:247616-247736:1:exon
so has part: feature:247998-248109:1:exon

XP_023844378.1
type: Protein
SIO_000068: ncbiprotein

position:246725:1
position: 246725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246725-246862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247208-247397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247616-247736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247998-248109:1:exon

LOC111964575
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 253584..273817
location: region:253584-273817:1
so has part: feature:253584-273817:1:exon
subclass of: SO_0000010

111964575
type: Gene
SIO_000068: ncbigene

position:253584:1
position: 253584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273817:1
position: 273817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253584-273817:1:exon

LOC111964575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964575
product: nuclear receptor ROR-gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023988422.2
SIO_010081: LOC111964575
subclass of: SO_0000673
so part of: LOC111964575
location: join(253584..255178,260707..260736,272936..273021,273133..273274,273453..273817)
location: region:253584-273817:1
so has part: feature:253584-255178:1:exon
so has part: feature:260707-260736:1:exon
so has part: feature:272936-273021:1:exon
so has part: feature:273133-273274:1:exon
so has part: feature:273453-273817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253584-255178:1:exon

position:255178:1
position: 255178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260707-260736:1:exon

position:260707:1
position: 260707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260736:1
position: 260736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272936-273021:1:exon

position:272936:1
position: 272936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273021:1
position: 273021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:273133-273274:1:exon

position:273133:1
position: 273133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273274:1
position: 273274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273453-273817:1:exon

position:273453:1
position: 273453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor ROR-gamma
translation: MEYEEPESPEHITTEEPIKRGDTVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFXRRSQLPSVSYSCSRQSNCPIDRASRNRCQSCRLQKCVTQGMSRDAVKFGRMSKRQRESLRAEVERHRQQQQQQHLQAEAQPALPYPSKACRFRTPHLLQAPAPAYSFPGEPELPPCPTDVPLPGVLPRRVPGSRSGLPGSCVSPGSGHSDKEVREWTHTYTPRNT
SIO_010081: LOC111964575
subclass of: SO_0000673
so part of: LOC111964575
location: join(255118..255178,260707..260736,272936..273021,273133..273274,273453..273817)
location: region:255118-273817:1
so has part: feature:255118-255178:1:exon
so has part: feature:260707-260736:1:exon
so has part: feature:272936-273021:1:exon
so has part: feature:273133-273274:1:exon
so has part: feature:273453-273817:1:exon

XP_023844190.1
type: Protein
SIO_000068: ncbiprotein

position:255118:1
position: 255118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255118-255178:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260707-260736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272936-273021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273133-273274:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273453-273817:1:exon

LOC111964818
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 282235..283541
location: region:282235-283541:1
so has part: feature:282235-283541:1:exon
subclass of: SO_0000011

111964818
type: Gene
SIO_000068: ncbigene

position:282235:1
position: 282235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283541:1
position: 283541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282235-283541:1:exon

LOC111964818
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964818
product: uncharacterized LOC111964818
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XR_002877442.1
SIO_010081: LOC111964818
subclass of: SO_0000673
so part of: LOC111964818
location: join(282235..282290,282555..282664,283465..283541)
location: region:282235-283541:1
so has part: feature:282235-282290:1:exon
so has part: feature:282555-282664:1:exon
so has part: feature:283465-283541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282235-282290:1:exon

position:282290:1
position: 282290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282555-282664:1:exon

position:282555:1
position: 282555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282664:1
position: 282664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:283465-283541:1:exon

position:283465:1
position: 283465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964816
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 294903..303887
location: region:294903-303887:1
so has part: feature:294903-303887:1:exon
subclass of: SO_0000010

111964816
type: Gene
SIO_000068: ncbigene

position:294903:1
position: 294903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303887:1
position: 303887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294903-303887:1:exon

LOC111964816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964816
product: extracellular matrix protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023988619.1
SIO_010081: LOC111964816
subclass of: SO_0000673
so part of: LOC111964816
location: join(294903..295184,295963..296028,296114..296463,296814..297001,300855..301140,301321..301538,302709..302796,303207..303887)
location: region:294903-303887:1
so has part: feature:294903-295184:1:exon
so has part: feature:295963-296028:1:exon
so has part: feature:296114-296463:1:exon
so has part: feature:296814-297001:1:exon
so has part: feature:300855-301140:1:exon
so has part: feature:301321-301538:1:exon
so has part: feature:302709-302796:1:exon
so has part: feature:303207-303887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294903-295184:1:exon

position:295184:1
position: 295184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295963-296028:1:exon

position:295963:1
position: 295963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296028:1
position: 296028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:296114-296463:1:exon

position:296114:1
position: 296114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296463:1
position: 296463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296814-297001:1:exon

position:296814:1
position: 296814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297001:1
position: 297001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300855-301140:1:exon

position:300855:1
position: 300855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301140:1
position: 301140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:301321-301538:1:exon

position:301321:1
position: 301321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301538:1
position: 301538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:302709-302796:1:exon

position:302709:1
position: 302709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302796:1
position: 302796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:303207-303887:1:exon

position:303207:1
position: 303207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964816
product: extracellular matrix protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023988621.1
SIO_010081: LOC111964816
subclass of: SO_0000673
so part of: LOC111964816
location: join(294903..295184,295963..296028,296114..296463,296814..297001,300855..301140,301321..301535,302709..302796,303207..303887)
location: region:294903-303887:1
so has part: feature:294903-295184:1:exon
so has part: feature:295963-296028:1:exon
so has part: feature:296114-296463:1:exon
so has part: feature:296814-297001:1:exon
so has part: feature:300855-301140:1:exon
so has part: feature:301321-301535:1:exon
so has part: feature:302709-302796:1:exon
so has part: feature:303207-303887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294903-295184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295963-296028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296114-296463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296814-297001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300855-301140:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301321-301535:1:exon

position:301535:1
position: 301535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:302709-302796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303207-303887:1:exon

LOC111964816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular matrix protein 1-like isoform X1
translation: MGWSWVLACWCALVLVCASEDNRSLPDLLQREASIDIEDFLQREIQLEPDKTQREITLHLDTDFTPGVRPMAGPRSFGDSHPSVLFPPGRPSPKNLQAICLHSSHRPRYPAYSLPRNGGGHFRRRAEAVNRVESWYNTCCHGNGTQQVQEVTLCCVTQAWEQTLSTFCTVESSVKTRQHHCCQKEGGARLSCFHRESPNPTYLPTTPIPEPGFTFNPNTCHKSQPGPCAARGEKHKKSPQATPRDSDISFPPGRPTSDNIELVCCLHNRRPLSTTKYLPRTGFGWLARQSKAMNQLERGFKHCCKGQEDVLPCAEGKWREVLDRFCEEEQKGRLRNSSCCDVGEGEDRYTCFSSRAPHPDYDQKLDSASAAPQTHTLGHICETYKIIKKKFPLDLPVQNFVGQCCSLPADQRTACVQIQLVMLSQRRCLEGKPSSSAVLQKSCPSSSFSQDSPMCLSRLLMNAITKATKSPHLRKRKFLLT
SIO_010081: LOC111964816
subclass of: SO_0000673
so part of: LOC111964816
location: join(295124..295184,295963..296028,296114..296463,296814..297001,300855..301140,301321..301538,302709..302796,303207..303395)
location: region:295124-303395:1
so has part: feature:295124-295184:1:exon
so has part: feature:295963-296028:1:exon
so has part: feature:296114-296463:1:exon
so has part: feature:296814-297001:1:exon
so has part: feature:300855-301140:1:exon
so has part: feature:301321-301538:1:exon
so has part: feature:302709-302796:1:exon
so has part: feature:303207-303395:1:exon

XP_023844387.1
type: Protein
SIO_000068: ncbiprotein

position:295124:1
position: 295124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303395:1
position: 303395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295124-295184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295963-296028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296114-296463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296814-297001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300855-301140:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301321-301538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302709-302796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303207-303395:1:exon

LOC111964816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular matrix protein 1-like isoform X2
translation: MGWSWVLACWCALVLVCASEDNRSLPDLLQREASIDIEDFLQREIQLEPDKTQREITLHLDTDFTPGVRPMAGPRSFGDSHPSVLFPPGRPSPKNLQAICLHSSHRPRYPAYSLPRNGGGHFRRRAEAVNRVESWYNTCCHGNGTQQVQEVTLCCVTQAWEQTLSTFCTVESSVKTRQHHCCQKEGGARLSCFHRESPNPTYLPTTPIPEPGFTFNPNTCHKSQPGPCAARGEKHKKSPQATPRDSDISFPPGRPTSDNIELVCCLHNRRPLSTTKYLPRTGFGWLARQSKAMNQLERGFKHCCKGQEDVLPCAEGKWREVLDRFCEEEQKGRLRNSSCCDVGEGEDRYTCFSSRAPHPDYDQKLDSASAAPQTHTLGHICETYKIIKKFPLDLPVQNFVGQCCSLPADQRTACVQIQLVMLSQRRCLEGKPSSSAVLQKSCPSSSFSQDSPMCLSRLLMNAITKATKSPHLRKRKFLLT
SIO_010081: LOC111964816
subclass of: SO_0000673
so part of: LOC111964816
location: join(295124..295184,295963..296028,296114..296463,296814..297001,300855..301140,301321..301535,302709..302796,303207..303395)
location: region:295124-303395:1
so has part: feature:295124-295184:1:exon
so has part: feature:295963-296028:1:exon
so has part: feature:296114-296463:1:exon
so has part: feature:296814-297001:1:exon
so has part: feature:300855-301140:1:exon
so has part: feature:301321-301535:1:exon
so has part: feature:302709-302796:1:exon
so has part: feature:303207-303395:1:exon

XP_023844389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295124-295184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295963-296028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296114-296463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296814-297001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300855-301140:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301321-301535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302709-302796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303207-303395:1:exon

LOC111964817
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314330..317679
location: region:314330-317679:1
so has part: feature:314330-317679:1:exon
subclass of: SO_0000010

111964817
type: Gene
SIO_000068: ncbigene

position:314330:1
position: 314330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317679:1
position: 317679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314330-317679:1:exon

LOC111964817
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964817
product: nuclear receptor ROR-gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_023988622.2
SIO_010081: LOC111964817
subclass of: SO_0000673
so part of: LOC111964817
location: join(314330..314467,314604..314711,315306..315416,315683..315792,316551..317679)
location: region:314330-317679:1
so has part: feature:314330-314467:1:exon
so has part: feature:314604-314711:1:exon
so has part: feature:315306-315416:1:exon
so has part: feature:315683-315792:1:exon
so has part: feature:316551-317679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314330-314467:1:exon

position:314467:1
position: 314467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314604-314711:1:exon

position:314604:1
position: 314604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314711:1
position: 314711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315306-315416:1:exon

position:315306:1
position: 315306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315416:1
position: 315416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315683-315792:1:exon

position:315683:1
position: 315683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315792:1
position: 315792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:316551-317679:1:exon

position:316551:1
position: 316551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964817
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor ROR-gamma
translation: MWQHCAVRLTEAVQYVVEFAKRIPGFRGLGQNDQITLLKTGSMEVVLVRMSRCFNTENSTVFFDGEFGSTELFKSLGCGDLMVAVFDFAHSVCALRLTEQQMALFSSLVLINPDRPCIEDRGRVHRMRRDLEVCLSHMLRRDNQESLQHKLYQKVSVLQSLCSLHVEKLHWFSQRYPLTVHSVFPPLYKELFTSDLPSVDSL
SIO_010081: LOC111964817
subclass of: SO_0000673
so part of: LOC111964817
location: join(314347..314467,314604..314711,315306..315416,315683..315792,316551..316709)
location: region:314347-316709:1
so has part: feature:314347-314467:1:exon
so has part: feature:314604-314711:1:exon
so has part: feature:315306-315416:1:exon
so has part: feature:315683-315792:1:exon
so has part: feature:316551-316709:1:exon

XP_023844390.1
type: Protein
SIO_000068: ncbiprotein

position:314347:1
position: 314347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316709:1
position: 316709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314347-314467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314604-314711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315306-315416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315683-315792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:316551-316709:1:exon

LOC112067829
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112067829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 327265..342145
location: region:327265-342145:1
so has part: feature:327265-342145:1:exon

112067829
type: Gene
SIO_000068: ncbigene

position:327265:1
position: 327265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342145:1
position: 342145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327265-342145:1:exon

LOC112067829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067829
subclass of: SO_0000673
so part of: LOC112067829
location: 327265..327688
location: region:327265-327688:1
so has part: feature:327265-327688:1:exon

position:327688:1
position: 327688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327265-327688:1:exon

LOC112067829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067829
subclass of: SO_0000673
so part of: LOC112067829
location: 328423..328479
location: region:328423-328479:1
so has part: feature:328423-328479:1:exon

position:328423:1
position: 328423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328479:1
position: 328479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328423-328479:1:exon

LOC112067829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067829
subclass of: SO_0000673
so part of: LOC112067829
location: 328581..328655
location: region:328581-328655:1
so has part: feature:328581-328655:1:exon

position:328581:1
position: 328581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328655:1
position: 328655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328581-328655:1:exon

LOC112067829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067829
subclass of: SO_0000673
so part of: LOC112067829
location: 329146..329220
location: region:329146-329220:1
so has part: feature:329146-329220:1:exon

position:329146:1
position: 329146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329220:1
position: 329220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329146-329220:1:exon

LOC112067829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067829
subclass of: SO_0000673
so part of: LOC112067829
location: 329335..329683
location: region:329335-329683:1
so has part: feature:329335-329683:1:exon

position:329335:1
position: 329335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329683:1
position: 329683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329335-329683:1:exon

LOC112067829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067829
subclass of: SO_0000673
so part of: LOC112067829
location: 329893..330094
location: region:329893-330094:1
so has part: feature:329893-330094:1:exon

position:329893:1
position: 329893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330094:1
position: 330094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329893-330094:1:exon

LOC112067829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067829
subclass of: SO_0000673
so part of: LOC112067829
location: 341456..341732
location: region:341456-341732:1
so has part: feature:341456-341732:1:exon

position:341456:1
position: 341456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341732:1
position: 341732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341456-341732:1:exon

LOC112067829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112067829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112067829
subclass of: SO_0000673
so part of: LOC112067829
location: 341910..342145
location: region:341910-342145:1
so has part: feature:341910-342145:1:exon

position:341910:1
position: 341910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341910-342145:1:exon

LOC112081104
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112081104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 347060..358593
location: region:347060-358593:1
so has part: feature:347060-358593:1:exon
subclass of: SO_0000011

112081104
type: Gene
SIO_000068: ncbigene

position:347060:1
position: 347060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358593:1
position: 358593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347060-358593:1:exon

LOC112081104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC112081104
product: uncharacterized LOC112081104, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002896320.1
SIO_010081: LOC112081104
subclass of: SO_0000673
so part of: LOC112081104
location: join(347060..347278,358104..358138,358579..358593)
location: region:347060-358593:1
so has part: feature:347060-347278:1:exon
so has part: feature:358104-358138:1:exon
so has part: feature:358579-358593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347060-347278:1:exon

position:347278:1
position: 347278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358104-358138:1:exon

position:358104:1
position: 358104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358138:1
position: 358138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358579-358593:1:exon

position:358579:1
position: 358579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112081104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC112081104
product: uncharacterized LOC112081104, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_002896319.1
SIO_010081: LOC112081104
subclass of: SO_0000673
so part of: LOC112081104
location: join(347060..347278,353787..353825,358104..358138)
location: region:347060-358138:1
so has part: feature:347060-347278:1:exon
so has part: feature:353787-353825:1:exon
so has part: feature:358104-358138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347060-347278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353787-353825:1:exon

position:353787:1
position: 353787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353825:1
position: 353825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358104-358138:1:exon

LOC111964820
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 358599..371038
location: region:358599-371038:1
so has part: feature:358599-371038:1:exon

111964820
type: Gene
SIO_000068: ncbigene

position:358599:1
position: 358599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371038:1
position: 371038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358599-371038:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 358599..358661
location: region:358599-358661:1
so has part: feature:358599-358661:1:exon

position:358661:1
position: 358661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358599-358661:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 358879..359008
location: region:358879-359008:1
so has part: feature:358879-359008:1:exon

position:358879:1
position: 358879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359008:1
position: 359008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358879-359008:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 360330..360442
location: region:360330-360442:1
so has part: feature:360330-360442:1:exon

position:360330:1
position: 360330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360442:1
position: 360442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360330-360442:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 360557..360703
location: region:360557-360703:1
so has part: feature:360557-360703:1:exon

position:360557:1
position: 360557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360703:1
position: 360703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360557-360703:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 364129..364139
location: region:364129-364139:1
so has part: feature:364129-364139:1:exon

position:364129:1
position: 364129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364139:1
position: 364139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364129-364139:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 364498..364795
location: region:364498-364795:1
so has part: feature:364498-364795:1:exon

position:364498:1
position: 364498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364795:1
position: 364795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364498-364795:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 364891..365123
location: region:364891-365123:1
so has part: feature:364891-365123:1:exon

position:364891:1
position: 364891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365123:1
position: 365123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364891-365123:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 365232..365324
location: region:365232-365324:1
so has part: feature:365232-365324:1:exon

position:365232:1
position: 365232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365324:1
position: 365324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365232-365324:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 365773..365811
location: region:365773-365811:1
so has part: feature:365773-365811:1:exon

position:365773:1
position: 365773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365811:1
position: 365811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365773-365811:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 365945..366029
location: region:365945-366029:1
so has part: feature:365945-366029:1:exon

position:365945:1
position: 365945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366029:1
position: 366029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365945-366029:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 366126..366296
location: region:366126-366296:1
so has part: feature:366126-366296:1:exon

position:366126:1
position: 366126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366296:1
position: 366296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366126-366296:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 366447..366579
location: region:366447-366579:1
so has part: feature:366447-366579:1:exon

position:366447:1
position: 366447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366579:1
position: 366579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366447-366579:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 366688..366753
location: region:366688-366753:1
so has part: feature:366688-366753:1:exon

position:366688:1
position: 366688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366753:1
position: 366753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366688-366753:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 366844..366937
location: region:366844-366937:1
so has part: feature:366844-366937:1:exon

position:366844:1
position: 366844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366937:1
position: 366937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366844-366937:1:exon

LOC111964820
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964820
subclass of: SO_0000673
so part of: LOC111964820
location: 367037..371038
location: region:367037-371038:1
so has part: feature:367037-371038:1:exon

position:367037:1
position: 367037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367037-371038:1:exon

LOC111964819
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 371663..375551
location: region:371663-375551:1
so has part: feature:371663-375551:1:exon
subclass of: SO_0000010

111964819
type: Gene
SIO_000068: ncbigene

position:371663:1
position: 371663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375551:1
position: 375551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371663-375551:1:exon

LOC111964819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964819
product: 26S proteasome non-ATPase regulatory subunit 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023988623.1
SIO_010081: LOC111964819
subclass of: SO_0000673
so part of: LOC111964819
location: join(371663..371771,373157..373297,373462..373576,373660..373746,373836..373904,373996..374211,374366..374474,374675..374806,374893..374957,375077..375551)
location: region:371663-375551:1
so has part: feature:371663-371771:1:exon
so has part: feature:373157-373297:1:exon
so has part: feature:373462-373576:1:exon
so has part: feature:373660-373746:1:exon
so has part: feature:373836-373904:1:exon
so has part: feature:373996-374211:1:exon
so has part: feature:374366-374474:1:exon
so has part: feature:374675-374806:1:exon
so has part: feature:374893-374957:1:exon
so has part: feature:375077-375551:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371663-371771:1:exon

position:371771:1
position: 371771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373157-373297:1:exon

position:373157:1
position: 373157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373297:1
position: 373297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373462-373576:1:exon

position:373462:1
position: 373462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373576:1
position: 373576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:373660-373746:1:exon

position:373660:1
position: 373660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373746:1
position: 373746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:373836-373904:1:exon

position:373836:1
position: 373836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373904:1
position: 373904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:373996-374211:1:exon

position:373996:1
position: 373996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374211:1
position: 374211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:374366-374474:1:exon

position:374366:1
position: 374366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374474:1
position: 374474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:374675-374806:1:exon

position:374675:1
position: 374675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374806:1
position: 374806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:374893-374957:1:exon

position:374893:1
position: 374893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374957:1
position: 374957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:375077-375551:1:exon

position:375077:1
position: 375077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964819
product: 26S proteasome non-ATPase regulatory subunit 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023988624.1
SIO_010081: LOC111964819
subclass of: SO_0000673
so part of: LOC111964819
location: join(371663..371771,373157..373297,373462..373576,373660..373746,373836..373904,373996..374211,374366..374474,374675..374806,374896..374957,375077..375253)
location: region:371663-375253:1
so has part: feature:371663-371771:1:exon
so has part: feature:373157-373297:1:exon
so has part: feature:373462-373576:1:exon
so has part: feature:373660-373746:1:exon
so has part: feature:373836-373904:1:exon
so has part: feature:373996-374211:1:exon
so has part: feature:374366-374474:1:exon
so has part: feature:374675-374806:1:exon
so has part: feature:374896-374957:1:exon
so has part: feature:375077-375253:1:exon

position:375253:1
position: 375253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371663-371771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373157-373297:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373462-373576:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373660-373746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:373836-373904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373996-374211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374366-374474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374675-374806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374896-374957:1:exon

position:374896:1
position: 374896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:375077-375253:1:exon

LOC111964819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 4 isoform X1
translation: MGLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITMANNCEVLTTLTADAGRILSKLQAVQPRGNISFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNDKDLVKMAKRLKKEKVSVDIINFGEEEVNTEKLTAFINTLNGKEGAGSHLVTVPPGPSLADALLSSPILAGEGGAMLGLGSSDFEFGVDPSADPELALALRVSMEEQRQRQEDETRRAAVVSAAEAGVPSPTADESEEALLKMSVPQADTATPAMPDFSRMTEDEQIAYALQMSMQGGAEFGAESMDMDTGAPVDSEGAKDEEDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQTGSKPDSKKDKDDEKKK
SIO_010081: LOC111964819
subclass of: SO_0000673
so part of: LOC111964819
location: join(371746..371771,373157..373297,373462..373576,373660..373746,373836..373904,373996..374211,374366..374474,374675..374806,374893..374957,375077..375253)
location: region:371746-375253:1
so has part: feature:371746-371771:1:exon
so has part: feature:373157-373297:1:exon
so has part: feature:373462-373576:1:exon
so has part: feature:373660-373746:1:exon
so has part: feature:373836-373904:1:exon
so has part: feature:373996-374211:1:exon
so has part: feature:374366-374474:1:exon
so has part: feature:374675-374806:1:exon
so has part: feature:374893-374957:1:exon
so has part: feature:375077-375253:1:exon

XP_023844391.1
type: Protein
SIO_000068: ncbiprotein

position:371746:1
position: 371746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371746-371771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373157-373297:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373462-373576:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373660-373746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:373836-373904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373996-374211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374366-374474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374675-374806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374893-374957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:375077-375253:1:exon

LOC111964819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 4 isoform X2
translation: MGLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITMANNCEVLTTLTADAGRILSKLQAVQPRGNISFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNDKDLVKMAKRLKKEKVSVDIINFGEEEVNTEKLTAFINTLNGKEGAGSHLVTVPPGPSLADALLSSPILAGEGGAMLGLGSSDFEFGVDPSADPELALALRVSMEEQRQRQEDETRRAAVVSAAEAGVPSPTADESEEALLKMSVPQADTATPAMPDFSRMTEDEQIAYALQMSMQGGEFGAESMDMDTGAPVDSEGAKDEEDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQTGSKPDSKKDKDDEKKK
SIO_010081: LOC111964819
subclass of: SO_0000673
so part of: LOC111964819
location: join(371746..371771,373157..373297,373462..373576,373660..373746,373836..373904,373996..374211,374366..374474,374675..374806,374896..374957,375077..375253)
location: region:371746-375253:1
so has part: feature:371746-371771:1:exon
so has part: feature:373157-373297:1:exon
so has part: feature:373462-373576:1:exon
so has part: feature:373660-373746:1:exon
so has part: feature:373836-373904:1:exon
so has part: feature:373996-374211:1:exon
so has part: feature:374366-374474:1:exon
so has part: feature:374675-374806:1:exon
so has part: feature:374896-374957:1:exon
so has part: feature:375077-375253:1:exon

XP_023844392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371746-371771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373157-373297:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373462-373576:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373660-373746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:373836-373904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373996-374211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374366-374474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374675-374806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374896-374957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:375077-375253:1:exon

LOC111964577
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 375892..388596
location: region:375892-388596:1
so has part: feature:375892-388596:1:exon
subclass of: SO_0000010

111964577
type: Gene
SIO_000068: ncbigene

position:375892:1
position: 375892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388596:1
position: 388596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375892-388596:1:exon

LOC111964577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964577
product: zinc finger protein 687a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024147104.1
SIO_010081: LOC111964577
subclass of: SO_0000673
so part of: LOC111964577
location: join(375892..376082,376909..379046,379605..379860,381720..381773,383227..383590,384545..384721,385816..385978,386129..386389,386990..387102,387279..387372,387476..388596)
location: region:375892-388596:1
so has part: feature:375892-376082:1:exon
so has part: feature:376909-379046:1:exon
so has part: feature:379605-379860:1:exon
so has part: feature:381720-381773:1:exon
so has part: feature:383227-383590:1:exon
so has part: feature:384545-384721:1:exon
so has part: feature:385816-385978:1:exon
so has part: feature:386129-386389:1:exon
so has part: feature:386990-387102:1:exon
so has part: feature:387279-387372:1:exon
so has part: feature:387476-388596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375892-376082:1:exon

position:376082:1
position: 376082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376909-379046:1:exon

position:376909:1
position: 376909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379046:1
position: 379046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379605-379860:1:exon

position:379605:1
position: 379605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379860:1
position: 379860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:381720-381773:1:exon

position:381720:1
position: 381720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381773:1
position: 381773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:383227-383590:1:exon

position:383227:1
position: 383227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383590:1
position: 383590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:384545-384721:1:exon

position:384545:1
position: 384545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384721:1
position: 384721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:385816-385978:1:exon

position:385816:1
position: 385816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385978:1
position: 385978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:386129-386389:1:exon

position:386129:1
position: 386129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386389:1
position: 386389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:386990-387102:1:exon

position:386990:1
position: 386990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387102:1
position: 387102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:387279-387372:1:exon

position:387279:1
position: 387279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387372:1
position: 387372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:387476-388596:1:exon

position:387476:1
position: 387476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 687a
translation: MGDMKTPDFDDLLAAFDIPDIDAKEAIQSAPEEGGEGSGKVGGSXSGXGGPSPRPSSPTDSPPNSQSEPPVVSVIVKNRVRPDSYEETEESDEEDGDSPGGSGTDPEVETGMGVKGGLLNSQLAPRMPGLVSSEPLLQNGFEGSTVTLEPSVRGQGLGQALGHANGELWSTCSPPTASEGGGSIGGAGGSACTTKHTVNILNRRKPLSSHTSAGPITSISSSSSSSSLSVNPHLSPPSILSEDTLCPHGTLPPPPPSNGSLRVGVRRIMDSDEDDSEPDLGSPLVIQESPDSPMCSPPKFPRRHRQLSSSELFRSPTPSSPPLLSCPPPLSSKPPPSISQTSSSSKPPPPDEVPSTPRSPSPPPAQPQARQSWLAAALSNPRPISSPVMEERNPEHVIEERDSPESPPXDQTGSAMSTVSKRSSSPAPTSASTPQGARGGEEPMESEPSLGCRSDNSEKMEVVDGRQTGDTETAPXNSTTTPTAPVRPLKVRIKTVKTPTGSITRTVTRVASKGAGGTPSKGADGSKPSPGXRXVLSRPKRVASQQPPQQKSKGGSLLPVSTLQDASTAMLMAASKAQNKMAADSNKPKVXATAVSITKSAALPSVSPASSSSPRFSPGGAGVRSLGQKTLNGGVSVSXSPLLTPQGGSRPASIVNSTGAIISRSQSSLVEAFNKILNSKNLLPSYRPDLCTPLPPEWDLPLPAQGYRCLECGDAFALERSLARHYDRRSLRIEVTCNHCAKRLAFFNKCSLLLHAREHKERGLVMQCSHLVMRPVSVEQMIGQQDTTPIGMLSPSLSTSSVPASSCSGACSGCPTGMFWLPYRHAPAALQACSGCPAGMLRLPCRHAPAALQACSGCPAGMIRLPCRHVPAAQQACSGCPAGMFRLPRRHVPAAPQACSAGCPAGMLRLPYRSYSAQTLYAMGSPTPLLCSSCQVVFGGLNSVKSHIQTAHCEVFHKCPSCPMAFKSSPSAQSHINTQHPTLTGGQAKMIYKCVMCDTVFTQKPLLYVHFDTHLVKQKVHVFKCPECPKLYAQRSSMLEHIKTTHRGPAVKQEVPVAMAPSPAPPPRVRSSVKTESSDGEEWGREEEEEEEERDGESSKTSPGWSCAPCHARYADREDYITHMAEQHGKILKKFPCSLCENSFSSTSSLRRHIRVKHKGIKRAFHCRLCSEGKRTFSSRLVLERHVQLRHGMSALDTKRGRGAEGADSSSEQDGGSNPPFTVSAEEDGGGGLKTEEEEDDVTEGIIPAKRPRVTSSAPPPQPESGFHCAPCGFTTEDRAVFLDHIPQHRSEALGGGVSLQCLQCGACFASAPSLSRHRFISHRVRDTPPDNHSRHGHNDRXLTSSPGNGGNHGDGSPRGGSLPGSPSSSSHPPTPLGEDGEGRVGCKVCGKRFEKVSDLNTHFRTHGMAFITARKTDKPV
SIO_010081: LOC111964577
subclass of: SO_0000673
so part of: LOC111964577
location: join(376932..379046,379605..379860,381720..381773,383227..383590,384545..384721,385816..385978,386129..386389,386990..387102,387279..387372,387476..388144)
location: region:376932-388144:1
so has part: feature:376932-379046:1:exon
so has part: feature:379605-379860:1:exon
so has part: feature:381720-381773:1:exon
so has part: feature:383227-383590:1:exon
so has part: feature:384545-384721:1:exon
so has part: feature:385816-385978:1:exon
so has part: feature:386129-386389:1:exon
so has part: feature:386990-387102:1:exon
so has part: feature:387279-387372:1:exon
so has part: feature:387476-388144:1:exon

XP_024002872.1
type: Protein
SIO_000068: ncbiprotein

position:376932:1
position: 376932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388144:1
position: 388144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376932-379046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379605-379860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381720-381773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383227-383590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384545-384721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385816-385978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386129-386389:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386990-387102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387279-387372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387476-388144:1:exon

otoa
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: otoa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(389834..399755)
location: region:389834-399755:-1
so has part: feature:389834-399755:-1:exon
subclass of: SO_0000010

111964578
type: Gene
SIO_000068: ncbigene

position:389834:-1
position: 389834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399755:-1
position: 399755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389834-399755:-1:exon

otoa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: otoa
product: otoancorin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988424.1
SIO_010081: otoa
subclass of: SO_0000673
so part of: otoa
location: complement(join(389834..390310,390788..390871,391823..391920,392075..392211,392279..392421,392651..392803,393013..393203,393334..393505,393692..393782,393883..394076,394556..394691,394926..395045,396400..396425,396674..396794,396931..396986,397070..397210,397602..397714,398175..398231,398749..398828,399349..399491,399638..399755))
location: region:389834-399755:-1
so has part: feature:399638-399755:-1:exon
so has part: feature:399349-399491:-1:exon
so has part: feature:398749-398828:-1:exon
so has part: feature:398175-398231:-1:exon
so has part: feature:397602-397714:-1:exon
so has part: feature:397070-397210:-1:exon
so has part: feature:396931-396986:-1:exon
so has part: feature:396674-396794:-1:exon
so has part: feature:396400-396425:-1:exon
so has part: feature:394926-395045:-1:exon
so has part: feature:394556-394691:-1:exon
so has part: feature:393883-394076:-1:exon
so has part: feature:393692-393782:-1:exon
so has part: feature:393334-393505:-1:exon
so has part: feature:393013-393203:-1:exon
so has part: feature:392651-392803:-1:exon
so has part: feature:392279-392421:-1:exon
so has part: feature:392075-392211:-1:exon
so has part: feature:391823-391920:-1:exon
so has part: feature:390788-390871:-1:exon
so has part: feature:389834-390310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399638-399755:-1:exon

position:399638:-1
position: 399638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399349-399491:-1:exon

position:399349:-1
position: 399349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399491:-1
position: 399491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398749-398828:-1:exon

position:398749:-1
position: 398749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398828:-1
position: 398828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:398175-398231:-1:exon

position:398175:-1
position: 398175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398231:-1
position: 398231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:397602-397714:-1:exon

position:397602:-1
position: 397602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397714:-1
position: 397714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:397070-397210:-1:exon

position:397070:-1
position: 397070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397210:-1
position: 397210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:396931-396986:-1:exon

position:396931:-1
position: 396931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396986:-1
position: 396986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:396674-396794:-1:exon

position:396674:-1
position: 396674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396794:-1
position: 396794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:396400-396425:-1:exon

position:396400:-1
position: 396400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396425:-1
position: 396425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:394926-395045:-1:exon

position:394926:-1
position: 394926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395045:-1
position: 395045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:394556-394691:-1:exon

position:394556:-1
position: 394556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394691:-1
position: 394691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:393883-394076:-1:exon

position:393883:-1
position: 393883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394076:-1
position: 394076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:393692-393782:-1:exon

position:393692:-1
position: 393692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393782:-1
position: 393782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:393334-393505:-1:exon

position:393334:-1
position: 393334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393505:-1
position: 393505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:393013-393203:-1:exon

position:393013:-1
position: 393013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393203:-1
position: 393203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:392651-392803:-1:exon

position:392651:-1
position: 392651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392803:-1
position: 392803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:392279-392421:-1:exon

position:392279:-1
position: 392279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392421:-1
position: 392421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:392075-392211:-1:exon

position:392075:-1
position: 392075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392211:-1
position: 392211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:391823-391920:-1:exon

position:391823:-1
position: 391823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391920:-1
position: 391920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:390788-390871:-1:exon

position:390788:-1
position: 390788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390871:-1
position: 390871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:389834-390310:-1:exon

position:390310:-1
position: 390310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

otoa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: otoa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: otoancorin
translation: MDVMKMMGPFLSGLPMDDIQTIPNDQLCQFFHSPQFPSSFRGVGGLPPLQGRKILQKIRECSQKRDDLVQNLDRLGSLACFYDDAPTLNSSMSRLLLSQMVLARALKDTLMSLGQEVKWGKGQIPGAYMGIEGLLDMMSKMTSTIGFETKHCSEIEKLLGDVNASELIQKVPASLLSSLSLTTLDKANLTSLDQLEGKQWTRAQSAFLVRNILGKKMTLPDMRKLGSAMQGVACDMIEKVAESGVLEMAQAVTETPRWLSKTQRRRITFVVRVVSVLHRVVCRFGDKRAGYFNNITDTELDEIPTLLLLHLPAEKIASLPASVCAVFMKKMKEANLSSLPLTSRSRPTLTNRALNCLGRNMSKLSSEEVLSLGSLLCELAPSQMSLLAPEVLNSTVQALASCKQIPPRHWRALFQLLNDTYGDPSDWTADTIKSLGPLLLLDDSAVRSLRFKSWLKETLSDLMDSLPSPPVPNPPQEFSSGPDLSALRWKLFSLSTSTSEVMPMRRRRAVLPQGEAGLTVSLLEELGGANVYWSPAQLSKMDADTITAAVETLGEVLDYSAEQLVVLREKAIQAWGPVSGLNESQVLQLGCVSQGFNLTELPSLPFSSLDTLETLSRCSWTQPQREAVWRGFVERINKTVGELGAVELVGLDQFICGLNTEETGQLNTDAFREAVQSVGEVQCPLAVTELLKQRAVAVFGEPQGWTEARVNSLGNIMAGLSLSEFPSLSPSAFSFLSPTSVPLIPPDRLAALSTSQLKALGPDNAAMVTNAQWAVLGEAQRAALGNALGVAYDRMANDIWNYSCMC
SIO_010081: otoa
subclass of: SO_0000673
so part of: otoa
location: complement(join(390224..390310,390788..390871,391823..391920,392075..392211,392279..392421,392651..392803,393013..393203,393334..393505,393692..393782,393883..394076,394556..394691,394926..395045,396400..396425,396674..396794,396931..396986,397070..397210,397602..397714,398175..398231,398749..398828,399349..399491,399638..399715))
location: region:390224-399715:-1
so has part: feature:399638-399715:-1:exon
so has part: feature:399349-399491:-1:exon
so has part: feature:398749-398828:-1:exon
so has part: feature:398175-398231:-1:exon
so has part: feature:397602-397714:-1:exon
so has part: feature:397070-397210:-1:exon
so has part: feature:396931-396986:-1:exon
so has part: feature:396674-396794:-1:exon
so has part: feature:396400-396425:-1:exon
so has part: feature:394926-395045:-1:exon
so has part: feature:394556-394691:-1:exon
so has part: feature:393883-394076:-1:exon
so has part: feature:393692-393782:-1:exon
so has part: feature:393334-393505:-1:exon
so has part: feature:393013-393203:-1:exon
so has part: feature:392651-392803:-1:exon
so has part: feature:392279-392421:-1:exon
so has part: feature:392075-392211:-1:exon
so has part: feature:391823-391920:-1:exon
so has part: feature:390788-390871:-1:exon
so has part: feature:390224-390310:-1:exon

XP_023844192.1
type: Protein
SIO_000068: ncbiprotein

position:390224:-1
position: 390224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399715:-1
position: 399715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399638-399715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399349-399491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398749-398828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398175-398231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397602-397714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:397070-397210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:396931-396986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:396674-396794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:396400-396425:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394926-395045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394556-394691:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:393883-394076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:393692-393782:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:393334-393505:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:393013-393203:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:392651-392803:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392279-392421:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:392075-392211:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:391823-391920:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390788-390871:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:390224-390310:-1:exon

LOC111964706
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(457006..457931)
location: region:457006-457931:-1
so has part: feature:457006-457931:-1:exon
subclass of: SO_0000011

111964706
type: Gene
SIO_000068: ncbigene

position:457006:-1
position: 457006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457931:-1
position: 457931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457006-457931:-1:exon

LOC111964706
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964706
product: uncharacterized LOC111964706
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XR_002877414.2
SIO_010081: LOC111964706
subclass of: SO_0000673
so part of: LOC111964706
location: complement(join(457006..457322,457509..457536,457822..457931))
location: region:457006-457931:-1
so has part: feature:457822-457931:-1:exon
so has part: feature:457509-457536:-1:exon
so has part: feature:457006-457322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457822-457931:-1:exon

position:457822:-1
position: 457822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457509-457536:-1:exon

position:457509:-1
position: 457509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457536:-1
position: 457536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457006-457322:-1:exon

position:457322:-1
position: 457322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964580
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(471127..485904)
location: region:471127-485904:-1
so has part: feature:471127-485904:-1:exon
subclass of: SO_0000010

111964580
type: Gene
SIO_000068: ncbigene

position:471127:-1
position: 471127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485904:-1
position: 485904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471127-485904:-1:exon

LOC111964580
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964580
product: interleukin-6 receptor subunit alpha-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024147105.1
SIO_010081: LOC111964580
subclass of: SO_0000673
so part of: LOC111964580
location: complement(join(471127..471441,471754..471856,472448..472502,473784..473824,474152..474296,474931..475085,475526..475596,475767..475807,485644..485904))
location: region:471127-485904:-1
so has part: feature:485644-485904:-1:exon
so has part: feature:475767-475807:-1:exon
so has part: feature:475526-475596:-1:exon
so has part: feature:474931-475085:-1:exon
so has part: feature:474152-474296:-1:exon
so has part: feature:473784-473824:-1:exon
so has part: feature:472448-472502:-1:exon
so has part: feature:471754-471856:-1:exon
so has part: feature:471127-471441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:485644-485904:-1:exon

position:485644:-1
position: 485644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475767-475807:-1:exon

position:475767:-1
position: 475767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475807:-1
position: 475807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475526-475596:-1:exon

position:475526:-1
position: 475526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475596:-1
position: 475596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474931-475085:-1:exon

position:474931:-1
position: 474931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475085:-1
position: 475085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:474152-474296:-1:exon

position:474152:-1
position: 474152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474296:-1
position: 474296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:473784-473824:-1:exon

position:473784:-1
position: 473784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473824:-1
position: 473824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:472448-472502:-1:exon

position:472448:-1
position: 472448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472502:-1
position: 472502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:471754-471856:-1:exon

position:471754:-1
position: 471754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471856:-1
position: 471856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:471127-471441:-1:exon

position:471441:-1
position: 471441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964580
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: interleukin-6 receptor subunit alpha-like
translation: MPSWIRLRVLLSALKSTAFWTGPVHGEPLCQLRSAIFLLLWNTDYTDSGSGMTEENQVRGTESYSRPPQLSSGEGVEGQEKRLRVSWAVPHSWKERDRYHELLYELRYHTMPHGTQIKGTTTARFYTITDALSGVQYLIQLRAKEEFDGHWSEWSTAVYANTWTAPVPTAFSDLSPVMQDYTDYTDSGSGMTEETSVSESRGDVEVWPHVLWVVASCVLLSITLLSAYLYRHRERFMSKLWRLSPVSSSPACPPPQXTALPTQEGHALVNFDXPIYGEPVPQEEEKKEEDEEEKREGEVIRFNNTSYFLVQSK
SIO_010081: LOC111964580
subclass of: SO_0000673
so part of: LOC111964580
location: complement(join(471194..471441,471754..471856,472448..472502,473784..473824,474152..474296,474931..475085,475526..475596,475767..475807,485644..485724))
location: region:471194-485724:-1
so has part: feature:485644-485724:-1:exon
so has part: feature:475767-475807:-1:exon
so has part: feature:475526-475596:-1:exon
so has part: feature:474931-475085:-1:exon
so has part: feature:474152-474296:-1:exon
so has part: feature:473784-473824:-1:exon
so has part: feature:472448-472502:-1:exon
so has part: feature:471754-471856:-1:exon
so has part: feature:471194-471441:-1:exon

XP_024002873.1
type: Protein
SIO_000068: ncbiprotein

position:471194:-1
position: 471194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485724:-1
position: 485724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485644-485724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475767-475807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475526-475596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474931-475085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474152-474296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473784-473824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472448-472502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471754-471856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471194-471441:-1:exon

LOC111964822
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(489979..500430)
location: region:489979-500430:-1
so has part: feature:489979-500430:-1:exon

111964822
type: Gene
SIO_000068: ncbigene

position:489979:-1
position: 489979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500430:-1
position: 500430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489979-500430:-1:exon

LOC111964822
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964822
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964822
subclass of: SO_0000673
so part of: LOC111964822
location: complement(489979..490751)
location: region:489979-490751:-1
so has part: feature:489979-490751:-1:exon

position:490751:-1
position: 490751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489979-490751:-1:exon

LOC111964822
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964822
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964822
subclass of: SO_0000673
so part of: LOC111964822
location: complement(490922..491500)
location: region:490922-491500:-1
so has part: feature:490922-491500:-1:exon

position:490922:-1
position: 490922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491500:-1
position: 491500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490922-491500:-1:exon

LOC111964822
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964822
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964822
subclass of: SO_0000673
so part of: LOC111964822
location: complement(497559..497827)
location: region:497559-497827:-1
so has part: feature:497559-497827:-1:exon

position:497559:-1
position: 497559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497827:-1
position: 497827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497559-497827:-1:exon

LOC111964822
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964822
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964822
subclass of: SO_0000673
so part of: LOC111964822
location: complement(498494..498726)
location: region:498494-498726:-1
so has part: feature:498494-498726:-1:exon

position:498494:-1
position: 498494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498726:-1
position: 498726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498494-498726:-1:exon

LOC111964822
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964822
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964822
subclass of: SO_0000673
so part of: LOC111964822
location: complement(498823..498905)
location: region:498823-498905:-1
so has part: feature:498823-498905:-1:exon

position:498823:-1
position: 498823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498905:-1
position: 498905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498823-498905:-1:exon

LOC111964822
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964822
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964822
subclass of: SO_0000673
so part of: LOC111964822
location: complement(499464..499687)
location: region:499464-499687:-1
so has part: feature:499464-499687:-1:exon

position:499464:-1
position: 499464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499687:-1
position: 499687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499464-499687:-1:exon

LOC111964822
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964822
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964822
subclass of: SO_0000673
so part of: LOC111964822
location: complement(500334..500430)
location: region:500334-500430:-1
so has part: feature:500334-500430:-1:exon

position:500334:-1
position: 500334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500334-500430:-1:exon

LOC111964581
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 518509..542635
location: region:518509-542635:1
so has part: feature:518509-542635:1:exon
subclass of: SO_0000010

111964581
type: Gene
SIO_000068: ncbigene

position:518509:1
position: 518509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542635:1
position: 542635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518509-542635:1:exon

LOC111964581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964581
product: carbonic anhydrase 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024147106.1
SIO_010081: LOC111964581
subclass of: SO_0000673
so part of: LOC111964581
location: join(518509..518865,520586..520606,531381..531560,532290..532336,536319..536429,539042..539137,539367..539433,540183..540340,540562..540685,542438..542458,542559..542635)
location: region:518509-542635:1
so has part: feature:518509-518865:1:exon
so has part: feature:520586-520606:1:exon
so has part: feature:531381-531560:1:exon
so has part: feature:532290-532336:1:exon
so has part: feature:536319-536429:1:exon
so has part: feature:539042-539137:1:exon
so has part: feature:539367-539433:1:exon
so has part: feature:540183-540340:1:exon
so has part: feature:540562-540685:1:exon
so has part: feature:542438-542458:1:exon
so has part: feature:542559-542635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518509-518865:1:exon

position:518865:1
position: 518865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520586-520606:1:exon

position:520586:1
position: 520586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520606:1
position: 520606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531381-531560:1:exon

position:531381:1
position: 531381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531560:1
position: 531560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:532290-532336:1:exon

position:532290:1
position: 532290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532336:1
position: 532336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:536319-536429:1:exon

position:536319:1
position: 536319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536429:1
position: 536429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:539042-539137:1:exon

position:539042:1
position: 539042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539137:1
position: 539137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539367-539433:1:exon

position:539367:1
position: 539367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539433:1
position: 539433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:540183-540340:1:exon

position:540183:1
position: 540183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540340:1
position: 540340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:540562-540685:1:exon

position:540562:1
position: 540562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540685:1
position: 540685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:542438-542458:1:exon

position:542438:1
position: 542438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542458:1
position: 542458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:542559-542635:1:exon

position:542559:1
position: 542559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 14
translation: MDLVGLSLPLLLVFWQWTTTTGAAVTYWTYTGSVGQSKWADYFPDCGGTAQSPVDVATVQTQYDPCLGPLTPLGYSQHGNKPFSLYNNGHTGNYSNQLTPSLTTDIQGGAWQFTAVQMHLHWGNGAPEAGGSEHTINGQSSAAELHVVHYNSELYPNMSVAMTQQDGLAVLGVLIETGEEANQAFWNILNYLGHVRHAGQSVSIPAFDVQSLLPSDLGRYYRYNGSLTTPPCFQSVLWTLFTETVKISHTQLMKLETVLYASKEDADRVVMQDNYRTPQPLNDRTILSSFPLESVKVYTAGEITAIVIGALCGCIGLAVIIRFI
SIO_010081: LOC111964581
subclass of: SO_0000673
so part of: LOC111964581
location: join(518793..518865,520586..520606,531381..531560,532290..532336,536319..536429,539042..539137,539367..539433,540183..540340,540562..540685,542438..542458,542559..542635)
location: region:518793-542635:1
so has part: feature:518793-518865:1:exon
so has part: feature:520586-520606:1:exon
so has part: feature:531381-531560:1:exon
so has part: feature:532290-532336:1:exon
so has part: feature:536319-536429:1:exon
so has part: feature:539042-539137:1:exon
so has part: feature:539367-539433:1:exon
so has part: feature:540183-540340:1:exon
so has part: feature:540562-540685:1:exon
so has part: feature:542438-542458:1:exon
so has part: feature:542559-542635:1:exon

XP_024002874.1
type: Protein
SIO_000068: ncbiprotein

position:518793:1
position: 518793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518793-518865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520586-520606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531381-531560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532290-532336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536319-536429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539042-539137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539367-539433:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540183-540340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540562-540685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:542438-542458:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:542559-542635:1:exon

setdb1
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: setdb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 562939..586317
location: region:562939-586317:1
so has part: feature:562939-586317:1:exon
subclass of: SO_0000010

111964582
type: Gene
SIO_000068: ncbigene

position:562939:1
position: 562939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586317:1
position: 586317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562939-586317:1:exon

setdb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: setdb1
product: SET domain bifurcated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988429.1
SIO_010081: setdb1
subclass of: SO_0000673
so part of: setdb1
location: join(562939..563046,564037..564240,564430..564599,564744..564787,573939..574044,574200..574373,574463..574667,574766..574839,575164..575354,575607..575736,575922..576075,576235..576378,576556..576892,577028..577289,577799..577889,578051..578167,578256..578425,582336..582593,582750..582911,583445..583617,583854..583873,584043..584151,584340..584843,585526..585614,585788..586317)
location: region:562939-586317:1
so has part: feature:562939-563046:1:exon
so has part: feature:564037-564240:1:exon
so has part: feature:564430-564599:1:exon
so has part: feature:564744-564787:1:exon
so has part: feature:573939-574044:1:exon
so has part: feature:574200-574373:1:exon
so has part: feature:574463-574667:1:exon
so has part: feature:574766-574839:1:exon
so has part: feature:575164-575354:1:exon
so has part: feature:575607-575736:1:exon
so has part: feature:575922-576075:1:exon
so has part: feature:576235-576378:1:exon
so has part: feature:576556-576892:1:exon
so has part: feature:577028-577289:1:exon
so has part: feature:577799-577889:1:exon
so has part: feature:578051-578167:1:exon
so has part: feature:578256-578425:1:exon
so has part: feature:582336-582593:1:exon
so has part: feature:582750-582911:1:exon
so has part: feature:583445-583617:1:exon
so has part: feature:583854-583873:1:exon
so has part: feature:584043-584151:1:exon
so has part: feature:584340-584843:1:exon
so has part: feature:585526-585614:1:exon
so has part: feature:585788-586317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562939-563046:1:exon

position:563046:1
position: 563046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564037-564240:1:exon

position:564037:1
position: 564037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564240:1
position: 564240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564430-564599:1:exon

position:564430:1
position: 564430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564599:1
position: 564599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:564744-564787:1:exon

position:564744:1
position: 564744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564787:1
position: 564787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:573939-574044:1:exon

position:573939:1
position: 573939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574044:1
position: 574044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:574200-574373:1:exon

position:574200:1
position: 574200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574373:1
position: 574373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:574463-574667:1:exon

position:574463:1
position: 574463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574667:1
position: 574667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:574766-574839:1:exon

position:574766:1
position: 574766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574839:1
position: 574839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:575164-575354:1:exon

position:575164:1
position: 575164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575354:1
position: 575354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:575607-575736:1:exon

position:575607:1
position: 575607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575736:1
position: 575736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:575922-576075:1:exon

position:575922:1
position: 575922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576075:1
position: 576075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:576235-576378:1:exon

position:576235:1
position: 576235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576378:1
position: 576378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:576556-576892:1:exon

position:576556:1
position: 576556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576892:1
position: 576892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:577028-577289:1:exon

position:577028:1
position: 577028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577289:1
position: 577289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:577799-577889:1:exon

position:577799:1
position: 577799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577889:1
position: 577889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:578051-578167:1:exon

position:578051:1
position: 578051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578167:1
position: 578167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:578256-578425:1:exon

position:578256:1
position: 578256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578425:1
position: 578425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:582336-582593:1:exon

position:582336:1
position: 582336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582593:1
position: 582593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:582750-582911:1:exon

position:582750:1
position: 582750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582911:1
position: 582911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:583445-583617:1:exon

position:583445:1
position: 583445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583617:1
position: 583617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:583854-583873:1:exon

position:583854:1
position: 583854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583873:1
position: 583873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:584043-584151:1:exon

position:584043:1
position: 584043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584151:1
position: 584151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:584340-584843:1:exon

position:584340:1
position: 584340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584843:1
position: 584843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:585526-585614:1:exon

position:585526:1
position: 585526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585614:1
position: 585614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:585788-586317:1:exon

position:585788:1
position: 585788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

setdb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: setdb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1
translation: MDNNDGMEVEGWDSGLEEELGVSLEELSKWIEEEVERSEAVRQRKAQLAELKEWVEQKEKEEEVVDKLFNNANQSIVECEALVKSTYSKMGLVYKESSSEDEGGVGGVQSSDVIEIEDDDDDDDVIAVGLLVPPKKPGIPVQDAMFKEASAALQRSSQQVLKLAQTVNKNSSSGPAIQQPGGPVPMPAVFVSQATPRNTPTQPNPSLKDDEIRLEMSLLGKKRTKTWHSGMLIAINPVGNGYSKYKVKFENKGKSLLSGNHIAFHYHPTLERLYVGARVVAKYKDGNQVWLYAGIVAEMPNNKNRMRFLIFFDDGYASYVTLPELYPVCRPMKRTWEDIEDASCKDFIEEYITSYPNRPMVLLKAGQVIKTEWEGTWWRSRVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKTNCANTQEKKMAGQQRTRPSMGALRTKGPVVQYHSGGNTTTPGGTPTKSPHPLSPPSSIPPTPSQPNQLARTDPKYQMAKKSTSPYIPTPGGSRTGLASNSHAPKAMQPQPSTGSPGNSSRMYVLQTGNIQTLTSLQPIQHQQQSLPPPPQAPPTAPAPAVTPYTFSNDRIPHEPSYRAPTDRIFYLPHTCQHACLNRIRPSRPDMHRGRNPLLTPLLYEFRRMTGRRRVNRKMSFHVIYKSPCGLCLRSMAEIQRYLFQTHCDFIFLEMFCLDPYVLVDRRFQPQKPYYYIRDITNGREDIPLSCVNEIDITPPPDVAYSKERIPEDGVFINTSPEFLVGCDCIDGCRDKSKCWCHQLTLQATACTPGAQINHTAGYTQKRLEECLPTGIYECNKRCKCCSQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSDGSGVDMSRLKNPPSSSLALQNKTLPKPPQRTNAANPAGKARGAGGDSSKDGDSDEESNNDKSSDDTFVKDPYYSSSSVWRSYTTRRQAKGVKEGSQDSKDGMSVSVGGKEDRKPPPMPEESGKSKVASWLTNQPSTSQATVKMEGLKIEKKEPGDQKSQQSVKTEGGKRQDVMTLSDSDDVQTISSGSDDNKWEEEIGGGGTMGEGGEVGVEGAGGKKKNGGRGKQVRRGGSWGCGFIDLCVLSGITRPVHVVLLPELTLSLLPFILLSSLSLPPVSGAVKRQVAVKSTRGIALKNSHGLMVKTGGAGMGPGGGPGGHGGAQGKGGDGGDSGPKNTRQFFDGEESCYIIDAKLEGNLGRYLNHSCSANLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGSTECRGRLL
SIO_010081: setdb1
subclass of: SO_0000673
so part of: setdb1
location: join(563030..563046,564037..564240,564430..564599,564744..564787,573939..574044,574200..574373,574463..574667,574766..574839,575164..575354,575607..575736,575922..576075,576235..576378,576556..576892,577028..577289,577799..577889,578051..578167,578256..578425,582336..582593,582750..582911,583445..583617,583854..583873,584043..584151,584340..584843,585526..585614,585788..585905)
location: region:563030-585905:1
so has part: feature:563030-563046:1:exon
so has part: feature:564037-564240:1:exon
so has part: feature:564430-564599:1:exon
so has part: feature:564744-564787:1:exon
so has part: feature:573939-574044:1:exon
so has part: feature:574200-574373:1:exon
so has part: feature:574463-574667:1:exon
so has part: feature:574766-574839:1:exon
so has part: feature:575164-575354:1:exon
so has part: feature:575607-575736:1:exon
so has part: feature:575922-576075:1:exon
so has part: feature:576235-576378:1:exon
so has part: feature:576556-576892:1:exon
so has part: feature:577028-577289:1:exon
so has part: feature:577799-577889:1:exon
so has part: feature:578051-578167:1:exon
so has part: feature:578256-578425:1:exon
so has part: feature:582336-582593:1:exon
so has part: feature:582750-582911:1:exon
so has part: feature:583445-583617:1:exon
so has part: feature:583854-583873:1:exon
so has part: feature:584043-584151:1:exon
so has part: feature:584340-584843:1:exon
so has part: feature:585526-585614:1:exon
so has part: feature:585788-585905:1:exon

XP_023844197.1
type: Protein
SIO_000068: ncbiprotein

position:563030:1
position: 563030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585905:1
position: 585905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563030-563046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564037-564240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564430-564599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564744-564787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573939-574044:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574200-574373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574463-574667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574766-574839:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575164-575354:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:575607-575736:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:575922-576075:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:576235-576378:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:576556-576892:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577028-577289:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:577799-577889:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:578051-578167:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:578256-578425:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:582336-582593:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:582750-582911:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:583445-583617:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:583854-583873:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:584043-584151:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:584340-584843:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:585526-585614:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:585788-585905:1:exon

LOC111964824
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 593646..602371
location: region:593646-602371:1
so has part: feature:593646-602371:1:exon
subclass of: SO_0000010

111964824
type: Gene
SIO_000068: ncbigene

position:593646:1
position: 593646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602371:1
position: 602371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593646-602371:1:exon

LOC111964824
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964824
product: nuclear factor 7, brain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_023988628.2
SIO_010081: LOC111964824
subclass of: SO_0000673
so part of: LOC111964824
location: join(593646..594243,597107..597200,597676..597911,598010..598074,600905..601014,601240..602371)
location: region:593646-602371:1
so has part: feature:593646-594243:1:exon
so has part: feature:597107-597200:1:exon
so has part: feature:597676-597911:1:exon
so has part: feature:598010-598074:1:exon
so has part: feature:600905-601014:1:exon
so has part: feature:601240-602371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593646-594243:1:exon

position:594243:1
position: 594243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:597107-597200:1:exon

position:597107:1
position: 597107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597200:1
position: 597200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:597676-597911:1:exon

position:597676:1
position: 597676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597911:1
position: 597911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:598010-598074:1:exon

position:598010:1
position: 598010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598074:1
position: 598074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:600905-601014:1:exon

position:600905:1
position: 600905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601014:1
position: 601014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:601240-602371:1:exon

position:601240:1
position: 601240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964824
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964824
product: nuclear factor 7, brain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023988626.2
SIO_010081: LOC111964824
subclass of: SO_0000673
so part of: LOC111964824
location: join(593648..594243,597107..597200,597676..597911,598010..598074,600899..601014,601240..602371)
location: region:593648-602371:1
so has part: feature:593648-594243:1:exon
so has part: feature:597107-597200:1:exon
so has part: feature:597676-597911:1:exon
so has part: feature:598010-598074:1:exon
so has part: feature:600899-601014:1:exon
so has part: feature:601240-602371:1:exon

position:593648:1
position: 593648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593648-594243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597107-597200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597676-597911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598010-598074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600899-601014:1:exon

position:600899:1
position: 600899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:601240-602371:1:exon

LOC111964824
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 7, brain isoform X1
translation: MTSVLSEQLQCPVCLCVFTDPVSLPCDHTFCRPCISAHLLQSSVKSXSRXPECRGPFSQKDLRAHRVLTNMADAAREEEESGLAARGPEAPQGRTVASELVCPEHDEKFKLFCETDQRLVCVICRDGEKHRGHTFTPVKEAAKISKNVLRGALGFLVKENREMEGLXQQQASEIIKTKEKSKSLSAHISSCFEELHQFLRRREEELKEEQEXEEKKTVAAMLKNDCVIENRLMIGREMEVTLQSALEIPKSDHFLEWWSERGLPVIEGMKMKDTAKPNYRSRVRSLSVTPDSLNLGLYETHLPFCMWKEMLKVVKPVPVRLTLSSSDDSYLKVSEGGASVRHADQGGFGFKYYRDYAATTTVVSTETVQTGQHYWEVEVGGKLDWGVGLKVKEDSGKESVLSPEREIMLHLKPEKGLVFSHDGVETPLMAAGGNPGTQAEAQAGPRRVGLYLDCDRERVSFYDADSMVLLHSSWCSFISPCSLCLCPGPYMEGRNTNPLTVCWY
SIO_010081: LOC111964824
subclass of: SO_0000673
so part of: LOC111964824
location: join(593806..594243,597107..597200,597676..597911,598010..598074,600899..601014,601240..601805)
location: region:593806-601805:1
so has part: feature:593806-594243:1:exon
so has part: feature:597107-597200:1:exon
so has part: feature:597676-597911:1:exon
so has part: feature:598010-598074:1:exon
so has part: feature:600899-601014:1:exon
so has part: feature:601240-601805:1:exon

XP_023844394.1
type: Protein
SIO_000068: ncbiprotein

position:593806:1
position: 593806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601805:1
position: 601805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593806-594243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597107-597200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597676-597911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598010-598074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600899-601014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601240-601805:1:exon

LOC111964824
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 7, brain isoform X2
translation: MTSVLSEQLQCPVCLCVFTDPVSLPCDHTFCRPCISAHLLQSSVKSXSRXPECRGPFSQKDLRAHRVLTNMADAAREEEESGLAARGPEAPQGRTVASELVCPEHDEKFKLFCETDQRLVCVICRDGEKHRGHTFTPVKEAAKISKNVLRGALGFLVKENREMEGLXQQQASEIIKTKEKSKSLSAHISSCFEELHQFLRRREEELKEEQEXEEKKTVAAMLKNDCVIENRLMIGREMEVTLQSALEIPKSDHFLEWWSERGLPVIEGMKMKDTAKPKSRVRSLSVTPDSLNLGLYETHLPFCMWKEMLKVVKPVPVRLTLSSSDDSYLKVSEGGASVRHADQGGFGFKYYRDYAATTTVVSTETVQTGQHYWEVEVGGKLDWGVGLKVKEDSGKESVLSPEREIMLHLKPEKGLVFSHDGVETPLMAAGGNPGTQAEAQAGPRRVGLYLDCDRERVSFYDADSMVLLHSSWCSFISPCSLCLCPGPYMEGRNTNPLTVCWY
SIO_010081: LOC111964824
subclass of: SO_0000673
so part of: LOC111964824
location: join(593806..594243,597107..597200,597676..597911,598010..598074,600905..601014,601240..601805)
location: region:593806-601805:1
so has part: feature:593806-594243:1:exon
so has part: feature:597107-597200:1:exon
so has part: feature:597676-597911:1:exon
so has part: feature:598010-598074:1:exon
so has part: feature:600905-601014:1:exon
so has part: feature:601240-601805:1:exon

XP_023844396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593806-594243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597107-597200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597676-597911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598010-598074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600905-601014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601240-601805:1:exon

LOC111964825
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(607145..623576)
location: region:607145-623576:-1
so has part: feature:607145-623576:-1:exon
subclass of: SO_0000010

111964825
type: Gene
SIO_000068: ncbigene

position:607145:-1
position: 607145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623576:-1
position: 623576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607145-623576:-1:exon

LOC111964825
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964825
product: dual specificity protein kinase CLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988629.1
SIO_010081: LOC111964825
subclass of: SO_0000673
so part of: LOC111964825
location: complement(join(607145..607530,608934..609017,609749..609755,612676..612755,613178..613260,613340..613469,620736..620830,621282..621448,621596..621712,621812..621878,622081..622171,623143..623576))
location: region:607145-623576:-1
so has part: feature:623143-623576:-1:exon
so has part: feature:622081-622171:-1:exon
so has part: feature:621812-621878:-1:exon
so has part: feature:621596-621712:-1:exon
so has part: feature:621282-621448:-1:exon
so has part: feature:620736-620830:-1:exon
so has part: feature:613340-613469:-1:exon
so has part: feature:613178-613260:-1:exon
so has part: feature:612676-612755:-1:exon
so has part: feature:609749-609755:-1:exon
so has part: feature:608934-609017:-1:exon
so has part: feature:607145-607530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623143-623576:-1:exon

position:623143:-1
position: 623143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622081-622171:-1:exon

position:622081:-1
position: 622081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622171:-1
position: 622171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:621812-621878:-1:exon

position:621812:-1
position: 621812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621878:-1
position: 621878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:621596-621712:-1:exon

position:621596:-1
position: 621596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621712:-1
position: 621712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:621282-621448:-1:exon

position:621282:-1
position: 621282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621448:-1
position: 621448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:620736-620830:-1:exon

position:620736:-1
position: 620736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620830:-1
position: 620830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:613340-613469:-1:exon

position:613340:-1
position: 613340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613469:-1
position: 613469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:613178-613260:-1:exon

position:613178:-1
position: 613178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613260:-1
position: 613260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:612676-612755:-1:exon

position:612676:-1
position: 612676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612755:-1
position: 612755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:609749-609755:-1:exon

position:609749:-1
position: 609749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609755:-1
position: 609755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:608934-609017:-1:exon

position:608934:-1
position: 608934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609017:-1
position: 609017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:607145-607530:-1:exon

position:607530:-1
position: 607530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase CLK2
translation: MGKTELYSVYKSFLDCICLCLSRSSSEGPGKNEKAPDDGHLAYQNGDVLQERYEVISLLGEGTFGKVVRCVDRRRAGARVALKIIKNMEKYRQAAKLEINVLEKINEKDPHNKHQCVQMLDWFDYHGHVCISMELLALSTFDFLKENNFLPYCMDHIRQMAYQICFAVNFLHINKLTHTDLKPENILFVNSDYTITYNAEKKRDERKVKDTTVRLVDFGSATFDHEHHSTIISTRHYRAPEVILELGWSHPCDVWSIGCILFEYYEGFTLYQTHDNQEHLAMMERVRGPLPSTMICKTRKDKYFHCRRLDWNDXSKAGRYVKDHIKPXWRYRLSEAKEHHQFFDLLEKMLEYEPSKRLSLSSALRHPFFLQLRRGSKAWESTRNICR
SIO_010081: LOC111964825
subclass of: SO_0000673
so part of: LOC111964825
location: complement(join(607354..607530,608934..609017,609749..609755,612676..612755,613178..613260,613340..613469,620736..620830,621282..621448,621596..621712,621812..621878,622081..622171,623143..623208))
location: region:607354-623208:-1
so has part: feature:623143-623208:-1:exon
so has part: feature:622081-622171:-1:exon
so has part: feature:621812-621878:-1:exon
so has part: feature:621596-621712:-1:exon
so has part: feature:621282-621448:-1:exon
so has part: feature:620736-620830:-1:exon
so has part: feature:613340-613469:-1:exon
so has part: feature:613178-613260:-1:exon
so has part: feature:612676-612755:-1:exon
so has part: feature:609749-609755:-1:exon
so has part: feature:608934-609017:-1:exon
so has part: feature:607354-607530:-1:exon

XP_023844397.1
type: Protein
SIO_000068: ncbiprotein

position:607354:-1
position: 607354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623208:-1
position: 623208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623143-623208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622081-622171:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621812-621878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621596-621712:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621282-621448:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620736-620830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:613340-613469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:613178-613260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612676-612755:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:609749-609755:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608934-609017:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:607354-607530:-1:exon

khdc4
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: khdc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(626091..636618)
location: region:626091-636618:-1
so has part: feature:626091-636618:-1:exon
subclass of: SO_0000010

111964583
type: Gene
SIO_000068: ncbigene

position:626091:-1
position: 626091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636618:-1
position: 636618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626091-636618:-1:exon

khdc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: khdc4
product: KH domain containing 4, pre-mRNA splicing factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024147107.1
SIO_010081: khdc4
subclass of: SO_0000673
so part of: khdc4
location: complement(join(626091..627040,628034..628125,628376..628491,629454..629597,630877..631089,631221..631231,631416..631456,631569..631601,631742..631854,633426..633577,633699..633751,633910..633989,634202..634330,634536..634728,636465..636618))
location: region:626091-636618:-1
so has part: feature:636465-636618:-1:exon
so has part: feature:634536-634728:-1:exon
so has part: feature:634202-634330:-1:exon
so has part: feature:633910-633989:-1:exon
so has part: feature:633699-633751:-1:exon
so has part: feature:633426-633577:-1:exon
so has part: feature:631742-631854:-1:exon
so has part: feature:631569-631601:-1:exon
so has part: feature:631416-631456:-1:exon
so has part: feature:631221-631231:-1:exon
so has part: feature:630877-631089:-1:exon
so has part: feature:629454-629597:-1:exon
so has part: feature:628376-628491:-1:exon
so has part: feature:628034-628125:-1:exon
so has part: feature:626091-627040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636465-636618:-1:exon

position:636465:-1
position: 636465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634536-634728:-1:exon

position:634536:-1
position: 634536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634728:-1
position: 634728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634202-634330:-1:exon

position:634202:-1
position: 634202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634330:-1
position: 634330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633910-633989:-1:exon

position:633910:-1
position: 633910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633989:-1
position: 633989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:633699-633751:-1:exon

position:633699:-1
position: 633699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633751:-1
position: 633751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:633426-633577:-1:exon

position:633426:-1
position: 633426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633577:-1
position: 633577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:631742-631854:-1:exon

position:631742:-1
position: 631742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631854:-1
position: 631854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:631569-631601:-1:exon

position:631569:-1
position: 631569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631601:-1
position: 631601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:631416-631456:-1:exon

position:631416:-1
position: 631416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631456:-1
position: 631456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:631221-631231:-1:exon

position:631221:-1
position: 631221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631231:-1
position: 631231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:630877-631089:-1:exon

position:630877:-1
position: 630877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631089:-1
position: 631089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:629454-629597:-1:exon

position:629454:-1
position: 629454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629597:-1
position: 629597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:628376-628491:-1:exon

position:628376:-1
position: 628376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628491:-1
position: 628491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:628034-628125:-1:exon

position:628034:-1
position: 628034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628125:-1
position: 628125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:626091-627040:-1:exon

position:627040:-1
position: 627040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

khdc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: khdc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KH homology domain-containing protein 4
translation: MSFGGTQNGGRRSKWDQPGPGPGSDQMGEAEAAPTGALDAAAAVAAKINAMLVAKGKLKPSQIGPSGPFGPPDKVVGVGKPQPPMKAKDDLVVAEVEIKDVPLPCRNLXTRGQTQDEISKVSGAAVSTRGRYMAAVEKYKAPQGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAATSYSGTGATVPVYQQHKSQPPINHHHRPHFQSGMHYVQEKLFVGLEHATQGFSVKERVEGPGSSYLQHIQGEGLELMYIYISHPQPEGLAAAKTLCSCRALCIPMANGMPPAPYDHHALLPSGYQPSYPPVPPPQPIPPLRCPPPFPWGACRSSPSQPVRPPPAPVSLPQTLPPSPFPPAAPVPPKAPPPVVLANPPQKRRFTEEVPDERDSGLLGYQHGPIHMTNLGAGFPVGSPGPEASGPPPPSSSGPPRERDSSRQLMPPPPIPMNGGMTPKMEERRPLQGPLDPSVKRMKTGLVAYXGDSSDEEEDHSTPKTLGAGNHGNVAGATHSTPTSSLGWTLGYRCPPPPQRAKTQQAQSQQPMPFWMAP
SIO_010081: khdc4
subclass of: SO_0000673
so part of: khdc4
location: complement(join(626790..627040,628034..628125,628376..628491,629454..629597,630877..631089,631221..631231,631416..631456,631569..631601,631742..631854,633426..633577,633699..633751,633910..633989,634202..634330,634536..634728,636465..636493))
location: region:626790-636493:-1
so has part: feature:636465-636493:-1:exon
so has part: feature:634536-634728:-1:exon
so has part: feature:634202-634330:-1:exon
so has part: feature:633910-633989:-1:exon
so has part: feature:633699-633751:-1:exon
so has part: feature:633426-633577:-1:exon
so has part: feature:631742-631854:-1:exon
so has part: feature:631569-631601:-1:exon
so has part: feature:631416-631456:-1:exon
so has part: feature:631221-631231:-1:exon
so has part: feature:630877-631089:-1:exon
so has part: feature:629454-629597:-1:exon
so has part: feature:628376-628491:-1:exon
so has part: feature:628034-628125:-1:exon
so has part: feature:626790-627040:-1:exon

XP_024002875.1
type: Protein
SIO_000068: ncbiprotein

position:626790:-1
position: 626790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636493:-1
position: 636493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636465-636493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634536-634728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634202-634330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633910-633989:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633699-633751:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:633426-633577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631742-631854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631569-631601:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:631416-631456:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:631221-631231:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630877-631089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:629454-629597:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628376-628491:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:628034-628125:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:626790-627040:-1:exon

LOC112081105
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112081105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(631075..631405)
location: region:631075-631405:-1
so has part: feature:631075-631405:-1:exon
subclass of: SO_0000011

112081105
type: Gene
SIO_000068: ncbigene

position:631075:-1
position: 631075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631405:-1
position: 631405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631075-631405:-1:exon

LOC112081105
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC112081105
product: uncharacterized LOC112081105
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002896321.1
SIO_010081: LOC112081105
subclass of: SO_0000673
so part of: LOC112081105
location: complement(join(631075..631089,631174..631231,631394..631405))
location: region:631075-631405:-1
so has part: feature:631394-631405:-1:exon
so has part: feature:631174-631231:-1:exon
so has part: feature:631075-631089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631394-631405:-1:exon

position:631394:-1
position: 631394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631174-631231:-1:exon

position:631174:-1
position: 631174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631075-631089:-1:exon

LOC111964826
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 636771..639724
location: region:636771-639724:1
so has part: feature:636771-639724:1:exon
subclass of: SO_0000010

111964826
type: Gene
SIO_000068: ncbigene

position:636771:1
position: 636771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639724:1
position: 639724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636771-639724:1:exon

LOC111964826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964826
product: uncharacterized LOC111964826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_023988630.1
SIO_010081: LOC111964826
subclass of: SO_0000673
so part of: LOC111964826
location: join(636771..637419,637613..637745,637972..638141,638347..638685,638847..638939,639034..639724)
location: region:636771-639724:1
so has part: feature:636771-637419:1:exon
so has part: feature:637613-637745:1:exon
so has part: feature:637972-638141:1:exon
so has part: feature:638347-638685:1:exon
so has part: feature:638847-638939:1:exon
so has part: feature:639034-639724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636771-637419:1:exon

position:637419:1
position: 637419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637613-637745:1:exon

position:637613:1
position: 637613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637745:1
position: 637745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:637972-638141:1:exon

position:637972:1
position: 637972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638141:1
position: 638141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:638347-638685:1:exon

position:638347:1
position: 638347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638685:1
position: 638685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:638847-638939:1:exon

position:638847:1
position: 638847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638939:1
position: 638939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:639034-639724:1:exon

position:639034:1
position: 639034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111964826
translation: MHNVYYVLVLSTLVVYPSSEVLLMPTLTVEPSGRQVYTEDTVSLACQLPGHSGLXWQFYWHKDRQDTGPVEQMWGXXGGGAVYQLWRASVTHTGQYWCRAGRGQPVXYXQYSQAVSVNVIELFTSVTLSASPSTVVKEXGAFNLTCEAQLSNCKLSQHHGNHSLHSHPDPDCNWTTVVVTFSFLRDGWPVARDSVSGMYSVAXASSCHMGTYSCVARAGRARRSSQEISITLDNLSLILVTCFGTFLILSVAPLAFFVRLYAMRLWQLRGRGQGELQCNECSTIQGPK
SIO_010081: LOC111964826
subclass of: SO_0000673
so part of: LOC111964826
location: join(637362..637419,637613..637745,637972..638141,638347..638685,638847..638939,639034..639107)
location: region:637362-639107:1
so has part: feature:637362-637419:1:exon
so has part: feature:637613-637745:1:exon
so has part: feature:637972-638141:1:exon
so has part: feature:638347-638685:1:exon
so has part: feature:638847-638939:1:exon
so has part: feature:639034-639107:1:exon

XP_023844398.1
type: Protein
SIO_000068: ncbiprotein

position:637362:1
position: 637362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639107:1
position: 639107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637362-637419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637613-637745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:637972-638141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638347-638685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638847-638939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639034-639107:1:exon

LOC111964827
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(655108..658709)
location: region:655108-658709:-1
so has part: feature:655108-658709:-1:exon
subclass of: SO_0000010

111964827
type: Gene
SIO_000068: ncbigene

position:655108:-1
position: 655108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658709:-1
position: 658709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655108-658709:-1:exon

LOC111964827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964827
product: urotensin-2 receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_023988631.1
SIO_010081: LOC111964827
subclass of: SO_0000673
so part of: LOC111964827
location: complement(join(655108..656721,658448..658709))
location: region:655108-658709:-1
so has part: feature:658448-658709:-1:exon
so has part: feature:655108-656721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658448-658709:-1:exon

position:658448:-1
position: 658448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655108-656721:-1:exon

position:656721:-1
position: 656721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urotensin-2 receptor-like
translation: MDFSSSLPPSPSPLYTSPFIPNSSFPSASPYISPSPSLASTALFCSLLSLLALLGIGGNLYTMGLLIRRRRGRRRRGCSSNCLGGRGVPLPSCLSSSPPSLSPSSSPTSSSSSSTSLHLQVLSLALADLLYLFTAPFIVYDSLAADWAFGELGCRLLFSLDLITLQASIYTLTAMSLDRYRAVANPLATSSSPSSGLLRVGLAWGLAVALSLPMMITLHLEDGDDGQLCVPAWDEQSSKVYMSVLFCTSMIGPGLAIGALYATLGRLYWVSQTRPWXSGSGGSXSYPPRAPRPKVLLLILGIVLALWACFLPFWVWQLLPLYRPDMLXTVPVGTQVTVNRILTGLTYGNSCVNPFFYTLLTGGKXRRNRQXXTSANXLCRKSSPQ
SIO_010081: LOC111964827
subclass of: SO_0000673
so part of: LOC111964827
location: complement(655465..656622)
location: region:655465-656622:-1
so has part: feature:655465-656622:-1:exon

XP_023844399.1
type: Protein
SIO_000068: ncbiprotein

position:655465:-1
position: 655465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656622:-1
position: 656622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655465-656622:-1:exon

LOC111964828
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 666225..693303
location: region:666225-693303:1
so has part: feature:666225-693303:1:exon
subclass of: SO_0000011

111964828
type: Gene
SIO_000068: ncbigene

position:666225:1
position: 666225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693303:1
position: 693303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666225-693303:1:exon

LOC111964828
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964828
product: uncharacterized LOC111964828
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002877444.1
SIO_010081: LOC111964828
subclass of: SO_0000673
so part of: LOC111964828
location: join(666225..666772,691779..691948,692220..693303)
location: region:666225-693303:1
so has part: feature:666225-666772:1:exon
so has part: feature:691779-691948:1:exon
so has part: feature:692220-693303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:666225-666772:1:exon

position:666772:1
position: 666772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:691779-691948:1:exon

position:691779:1
position: 691779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691948:1
position: 691948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:692220-693303:1:exon

position:692220:1
position: 692220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964829
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 709217..736286
location: region:709217-736286:1
so has part: feature:709217-736286:1:exon

111964829
type: Gene
SIO_000068: ncbigene

position:709217:1
position: 709217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736286:1
position: 736286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709217-736286:1:exon

LOC111964829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964829
subclass of: SO_0000673
so part of: LOC111964829
location: 709217..709498
location: region:709217-709498:1
so has part: feature:709217-709498:1:exon

position:709498:1
position: 709498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709217-709498:1:exon

LOC111964829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964829
subclass of: SO_0000673
so part of: LOC111964829
location: 725181..725399
location: region:725181-725399:1
so has part: feature:725181-725399:1:exon

position:725181:1
position: 725181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725399:1
position: 725399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725181-725399:1:exon

LOC111964829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964829
subclass of: SO_0000673
so part of: LOC111964829
location: 731908..731991
location: region:731908-731991:1
so has part: feature:731908-731991:1:exon

position:731908:1
position: 731908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731991:1
position: 731991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731908-731991:1:exon

LOC111964829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964829
subclass of: SO_0000673
so part of: LOC111964829
location: 734793..734922
location: region:734793-734922:1
so has part: feature:734793-734922:1:exon

position:734793:1
position: 734793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734922:1
position: 734922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734793-734922:1:exon

LOC111964829
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111964829
subclass of: SO_0000673
so part of: LOC111964829
location: 735264..736286
location: region:735264-736286:1
so has part: feature:735264-736286:1:exon

position:735264:1
position: 735264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735264-736286:1:exon

LOC111964830
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(747730..769937)
location: region:747730-769937:-1
so has part: feature:747730-769937:-1:exon
subclass of: SO_0000010

111964830
type: Gene
SIO_000068: ncbigene

position:747730:-1
position: 747730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769937:-1
position: 769937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747730-769937:-1:exon

LOC111964830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964830
product: voltage-dependent calcium channel gamma-6 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_023988634.1
SIO_010081: LOC111964830
subclass of: SO_0000673
so part of: LOC111964830
location: complement(join(747730..747986,751024..751098,754565..755307,769841..769937))
location: region:747730-769937:-1
so has part: feature:769841-769937:-1:exon
so has part: feature:754565-755307:-1:exon
so has part: feature:751024-751098:-1:exon
so has part: feature:747730-747986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769841-769937:-1:exon

position:769841:-1
position: 769841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754565-755307:-1:exon

position:754565:-1
position: 754565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755307:-1
position: 755307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751024-751098:-1:exon

position:751024:-1
position: 751024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751098:-1
position: 751098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747730-747986:-1:exon

position:747986:-1
position: 747986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964830
product: voltage-dependent calcium channel gamma-6 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_023988633.1
SIO_010081: LOC111964830
subclass of: SO_0000673
so part of: LOC111964830
location: complement(join(747730..747986,750575..750712,751024..751098,754565..755307,769841..769937))
location: region:747730-769937:-1
so has part: feature:769841-769937:-1:exon
so has part: feature:754565-755307:-1:exon
so has part: feature:751024-751098:-1:exon
so has part: feature:750575-750712:-1:exon
so has part: feature:747730-747986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769841-769937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754565-755307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751024-751098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750575-750712:-1:exon

position:750575:-1
position: 750575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750712:-1
position: 750712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:747730-747986:-1:exon

LOC111964830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-6 subunit isoform X2
translation: MWANYIVQPEEDGRMGVVGAGPHGGXAGXAGXKGXGRXTRRTPRMSDSQEGKIKLAFFVAIVGVTLTVLGVGTEFWVELATPKTWSNNQTCQTAHYGLWKGCTRTLWVDDIDPERESCGPADLPGESNCTYFKFFTNGDNAVIFKKTTHKSLLVLLSILVFHQSVLALLSSDHSIPLHHELSWSVACVGFAGAILIMGGILFLILSLPYSPWEKCLPQRNSSTT
SIO_010081: LOC111964830
subclass of: SO_0000673
so part of: LOC111964830
location: complement(join(747763..747986,751024..751098,754565..754940))
location: region:747763-754940:-1
so has part: feature:754565-754940:-1:exon
so has part: feature:751024-751098:-1:exon
so has part: feature:747763-747986:-1:exon

XP_023844402.1
type: Protein
SIO_000068: ncbiprotein

position:747763:-1
position: 747763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754940:-1
position: 754940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754565-754940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751024-751098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:747763-747986:-1:exon

LOC111964830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-6 subunit isoform X1
translation: MWANYIVQPEEDGRMGVVGAGPHGGXAGXAGXKGXGRXTRRTPRMSDSQEGKIKLAFFVAIVGVTLTVLGVGTEFWVELATPKTWSNNQTCQTAHYGLWKGCTRTLWVDDIDPERESCGPADLPGESNCTYFKFFTNGDNAVIFKKTTHKNLNIAAAILAMIALSMMVMGAICITMSLSKGVPFFLKPASFCFILSGLLVLLSILVFHQSVLALLSSDHSIPLHHELSWSVACVGFAGAILIMGGILFLILSLPYSPWEKCLPQRNSSTT
SIO_010081: LOC111964830
subclass of: SO_0000673
so part of: LOC111964830
location: complement(join(747763..747986,750575..750712,751024..751098,754565..754940))
location: region:747763-754940:-1
so has part: feature:754565-754940:-1:exon
so has part: feature:751024-751098:-1:exon
so has part: feature:750575-750712:-1:exon
so has part: feature:747763-747986:-1:exon

XP_023844401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:754565-754940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751024-751098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750575-750712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747763-747986:-1:exon

LOC111964831
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(774444..785136)
location: region:774444-785136:-1
so has part: feature:774444-785136:-1:exon
subclass of: SO_0000010

111964831
type: Gene
SIO_000068: ncbigene

position:774444:-1
position: 774444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785136:-1
position: 785136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774444-785136:-1:exon

LOC111964831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964831
product: splicing factor U2AF 65 kDa subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_023988636.1
SIO_010081: LOC111964831
subclass of: SO_0000673
so part of: LOC111964831
location: complement(join(774444..776100,776206..776457,776745..776831,777330..777470,777823..777902,778112..778250,781508..781624,782081..782232,782421..782530,783755..783896,784097..784159,784552..785136))
location: region:774444-785136:-1
so has part: feature:784552-785136:-1:exon
so has part: feature:784097-784159:-1:exon
so has part: feature:783755-783896:-1:exon
so has part: feature:782421-782530:-1:exon
so has part: feature:782081-782232:-1:exon
so has part: feature:781508-781624:-1:exon
so has part: feature:778112-778250:-1:exon
so has part: feature:777823-777902:-1:exon
so has part: feature:777330-777470:-1:exon
so has part: feature:776745-776831:-1:exon
so has part: feature:776206-776457:-1:exon
so has part: feature:774444-776100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784552-785136:-1:exon

position:784552:-1
position: 784552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784097-784159:-1:exon

position:784097:-1
position: 784097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784159:-1
position: 784159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783755-783896:-1:exon

position:783755:-1
position: 783755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783896:-1
position: 783896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782421-782530:-1:exon

position:782421:-1
position: 782421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782530:-1
position: 782530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:782081-782232:-1:exon

position:782081:-1
position: 782081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782232:-1
position: 782232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:781508-781624:-1:exon

position:781508:-1
position: 781508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781624:-1
position: 781624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:778112-778250:-1:exon

position:778112:-1
position: 778112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778250:-1
position: 778250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:777823-777902:-1:exon

position:777823:-1
position: 777823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777902:-1
position: 777902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:777330-777470:-1:exon

position:777330:-1
position: 777330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777470:-1
position: 777470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:776745-776831:-1:exon

position:776745:-1
position: 776745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776831:-1
position: 776831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:776206-776457:-1:exon

position:776206:-1
position: 776206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776457:-1
position: 776457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:774444-776100:-1:exon

position:776100:-1
position: 776100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964831
product: splicing factor U2AF 65 kDa subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_023988638.1
SIO_010081: LOC111964831
subclass of: SO_0000673
so part of: LOC111964831
location: complement(join(774444..776100,776206..776457,776745..776831,777330..777470,777823..777902,778112..778250,781508..781624,782081..782232,782421..782530,783755..783896,784552..785135))
location: region:774444-785135:-1
so has part: feature:784552-785135:-1:exon
so has part: feature:783755-783896:-1:exon
so has part: feature:782421-782530:-1:exon
so has part: feature:782081-782232:-1:exon
so has part: feature:781508-781624:-1:exon
so has part: feature:778112-778250:-1:exon
so has part: feature:777823-777902:-1:exon
so has part: feature:777330-777470:-1:exon
so has part: feature:776745-776831:-1:exon
so has part: feature:776206-776457:-1:exon
so has part: feature:774444-776100:-1:exon

position:785135:-1
position: 785135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784552-785135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783755-783896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782421-782530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782081-782232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781508-781624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778112-778250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:777823-777902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777330-777470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:776745-776831:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:776206-776457:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:774444-776100:-1:exon

LOC111964831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964831
product: splicing factor U2AF 65 kDa subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023988637.1
SIO_010081: LOC111964831
subclass of: SO_0000673
so part of: LOC111964831
location: complement(join(774444..776100,776206..776457,776745..776831,777330..777470,777823..777902,778112..778250,781508..781624,782081..782232,782421..782530,783051..783089,783755..783896,784552..785135))
location: region:774444-785135:-1
so has part: feature:784552-785135:-1:exon
so has part: feature:783755-783896:-1:exon
so has part: feature:783051-783089:-1:exon
so has part: feature:782421-782530:-1:exon
so has part: feature:782081-782232:-1:exon
so has part: feature:781508-781624:-1:exon
so has part: feature:778112-778250:-1:exon
so has part: feature:777823-777902:-1:exon
so has part: feature:777330-777470:-1:exon
so has part: feature:776745-776831:-1:exon
so has part: feature:776206-776457:-1:exon
so has part: feature:774444-776100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784552-785135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783755-783896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783051-783089:-1:exon

position:783051:-1
position: 783051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783089:-1
position: 783089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782421-782530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782081-782232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:781508-781624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778112-778250:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777823-777902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777330-777470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:776745-776831:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:776206-776457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:774444-776100:-1:exon

LOC111964831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964831
product: splicing factor U2AF 65 kDa subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_023988635.1
SIO_010081: LOC111964831
subclass of: SO_0000673
so part of: LOC111964831
location: complement(join(774444..776100,776206..776457,776745..776831,777330..777470,777823..777902,778112..778250,781508..781624,782081..782232,782421..782530,783051..783089,783755..783896,784097..784159,784552..785135))
location: region:774444-785135:-1
so has part: feature:784552-785135:-1:exon
so has part: feature:784097-784159:-1:exon
so has part: feature:783755-783896:-1:exon
so has part: feature:783051-783089:-1:exon
so has part: feature:782421-782530:-1:exon
so has part: feature:782081-782232:-1:exon
so has part: feature:781508-781624:-1:exon
so has part: feature:778112-778250:-1:exon
so has part: feature:777823-777902:-1:exon
so has part: feature:777330-777470:-1:exon
so has part: feature:776745-776831:-1:exon
so has part: feature:776206-776457:-1:exon
so has part: feature:774444-776100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784552-785135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784097-784159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783755-783896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783051-783089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782421-782530:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782081-782232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781508-781624:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778112-778250:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777823-777902:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777330-777470:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:776745-776831:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:776206-776457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:774444-776100:-1:exon

LOC111964831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X4
translation: MSDFDEFERQLSENKQAEKDKENRHHRRSPSRSRSRERKRRSRDKDRRSRDRRGDSKERRPRRSRSPHRETKKKNKVKKYWDVPPPGFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC111964831
subclass of: SO_0000673
so part of: LOC111964831
location: complement(join(775966..776100,776206..776457,776745..776831,777330..777470,777823..777902,778112..778250,781508..781624,782081..782232,782421..782530,783755..783896,784552..784600))
location: region:775966-784600:-1
so has part: feature:784552-784600:-1:exon
so has part: feature:783755-783896:-1:exon
so has part: feature:782421-782530:-1:exon
so has part: feature:782081-782232:-1:exon
so has part: feature:781508-781624:-1:exon
so has part: feature:778112-778250:-1:exon
so has part: feature:777823-777902:-1:exon
so has part: feature:777330-777470:-1:exon
so has part: feature:776745-776831:-1:exon
so has part: feature:776206-776457:-1:exon
so has part: feature:775966-776100:-1:exon

XP_023844406.1
type: Protein
SIO_000068: ncbiprotein

position:775966:-1
position: 775966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784600:-1
position: 784600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784552-784600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783755-783896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782421-782530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782081-782232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781508-781624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778112-778250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:777823-777902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777330-777470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:776745-776831:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:776206-776457:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:775966-776100:-1:exon

LOC111964831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X3
translation: MSDFDEFERQLSENKQAEKDKENRHHRRSPSRSRSRERKRRSRDKDRRSRDRRGDSKERRPRRSSPSQQQPQEIAVSRSPHRETKKKNKVKKYWDVPPPGFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC111964831
subclass of: SO_0000673
so part of: LOC111964831
location: complement(join(775966..776100,776206..776457,776745..776831,777330..777470,777823..777902,778112..778250,781508..781624,782081..782232,782421..782530,783051..783089,783755..783896,784552..784600))
location: region:775966-784600:-1
so has part: feature:784552-784600:-1:exon
so has part: feature:783755-783896:-1:exon
so has part: feature:783051-783089:-1:exon
so has part: feature:782421-782530:-1:exon
so has part: feature:782081-782232:-1:exon
so has part: feature:781508-781624:-1:exon
so has part: feature:778112-778250:-1:exon
so has part: feature:777823-777902:-1:exon
so has part: feature:777330-777470:-1:exon
so has part: feature:776745-776831:-1:exon
so has part: feature:776206-776457:-1:exon
so has part: feature:775966-776100:-1:exon

XP_023844405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:784552-784600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783755-783896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783051-783089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782421-782530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782081-782232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:781508-781624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778112-778250:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777823-777902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777330-777470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:776745-776831:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:776206-776457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:775966-776100:-1:exon

LOC111964831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X2
translation: MSDFDEFERQLSENKQAQLVEHGACNARIGRSIPGNTPEKDKENRHHRRSPSRSRSRERKRRSRDKDRRSRDRRGDSKERRPRRSRSPHRETKKKNKVKKYWDVPPPGFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC111964831
subclass of: SO_0000673
so part of: LOC111964831
location: complement(join(775966..776100,776206..776457,776745..776831,777330..777470,777823..777902,778112..778250,781508..781624,782081..782232,782421..782530,783755..783896,784097..784159,784552..784600))
location: region:775966-784600:-1
so has part: feature:784552-784600:-1:exon
so has part: feature:784097-784159:-1:exon
so has part: feature:783755-783896:-1:exon
so has part: feature:782421-782530:-1:exon
so has part: feature:782081-782232:-1:exon
so has part: feature:781508-781624:-1:exon
so has part: feature:778112-778250:-1:exon
so has part: feature:777823-777902:-1:exon
so has part: feature:777330-777470:-1:exon
so has part: feature:776745-776831:-1:exon
so has part: feature:776206-776457:-1:exon
so has part: feature:775966-776100:-1:exon

XP_023844404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:784552-784600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784097-784159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783755-783896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782421-782530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782081-782232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:781508-781624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778112-778250:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777823-777902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777330-777470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:776745-776831:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:776206-776457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:775966-776100:-1:exon

LOC111964831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X1
translation: MSDFDEFERQLSENKQAQLVEHGACNARIGRSIPGNTPEKDKENRHHRRSPSRSRSRERKRRSRDKDRRSRDRRGDSKERRPRRSSPSQQQPQEIAVSRSPHRETKKKNKVKKYWDVPPPGFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC111964831
subclass of: SO_0000673
so part of: LOC111964831
location: complement(join(775966..776100,776206..776457,776745..776831,777330..777470,777823..777902,778112..778250,781508..781624,782081..782232,782421..782530,783051..783089,783755..783896,784097..784159,784552..784600))
location: region:775966-784600:-1
so has part: feature:784552-784600:-1:exon
so has part: feature:784097-784159:-1:exon
so has part: feature:783755-783896:-1:exon
so has part: feature:783051-783089:-1:exon
so has part: feature:782421-782530:-1:exon
so has part: feature:782081-782232:-1:exon
so has part: feature:781508-781624:-1:exon
so has part: feature:778112-778250:-1:exon
so has part: feature:777823-777902:-1:exon
so has part: feature:777330-777470:-1:exon
so has part: feature:776745-776831:-1:exon
so has part: feature:776206-776457:-1:exon
so has part: feature:775966-776100:-1:exon

XP_023844403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:784552-784600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784097-784159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783755-783896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783051-783089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782421-782530:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782081-782232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781508-781624:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778112-778250:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777823-777902:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777330-777470:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:776745-776831:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:776206-776457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:775966-776100:-1:exon

ccdc106
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: ccdc106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(785438..796012)
location: region:785438-796012:-1
so has part: feature:785438-796012:-1:exon
subclass of: SO_0000010

111964832
type: Gene
SIO_000068: ncbigene

position:785438:-1
position: 785438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796012:-1
position: 796012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785438-796012:-1:exon

ccdc106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: ccdc106
product: coiled-coil domain containing 106, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_023988645.1
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(785438..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795287,795851..795977))
location: region:785438-795977:-1
so has part: feature:795851-795977:-1:exon
so has part: feature:795208-795287:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:785438-787827:-1:exon

position:795977:-1
position: 795977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795851-795977:-1:exon

position:795851:-1
position: 795851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795208-795287:-1:exon

position:795208:-1
position: 795208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795287:-1
position: 795287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:794986-795084:-1:exon

position:794986:-1
position: 794986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795084:-1
position: 795084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:794566-794796:-1:exon

position:794566:-1
position: 794566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794796:-1
position: 794796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:793667-793723:-1:exon

position:793667:-1
position: 793667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793723:-1
position: 793723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:793264-793506:-1:exon

position:793264:-1
position: 793264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793506:-1
position: 793506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:790984-791154:-1:exon

position:790984:-1
position: 790984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791154:-1
position: 791154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:785438-787827:-1:exon

position:787827:-1
position: 787827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ccdc106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: ccdc106
product: coiled-coil domain containing 106, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_023988644.1
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(785441..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795287,795917..796012))
location: region:785441-796012:-1
so has part: feature:795917-796012:-1:exon
so has part: feature:795208-795287:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:785441-786677:-1:exon

position:785441:-1
position: 785441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795917-796012:-1:exon

position:795917:-1
position: 795917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795208-795287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787524-787827:-1:exon

position:787524:-1
position: 787524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:785441-786677:-1:exon

position:786677:-1
position: 786677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ccdc106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: ccdc106
product: coiled-coil domain containing 106, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_023988643.1
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(785441..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795287,795851..795977))
location: region:785441-795977:-1
so has part: feature:795851-795977:-1:exon
so has part: feature:795208-795287:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:785441-786677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795851-795977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:795208-795287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:785441-786677:-1:exon

ccdc106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: ccdc106
product: coiled-coil domain containing 106, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_023988642.1
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(785441..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795287,795805..795977))
location: region:785441-795977:-1
so has part: feature:795805-795977:-1:exon
so has part: feature:795208-795287:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:785441-786677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795805-795977:-1:exon

position:795805:-1
position: 795805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795208-795287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:785441-786677:-1:exon

ccdc106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: ccdc106
product: coiled-coil domain containing 106, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_023988639.1
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(785441..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795287,795543..795977))
location: region:785441-795977:-1
so has part: feature:795543-795977:-1:exon
so has part: feature:795208-795287:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:785441-786677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795543-795977:-1:exon

position:795543:-1
position: 795543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795208-795287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:785441-786677:-1:exon

ccdc106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: ccdc106
product: coiled-coil domain containing 106, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_023988640.1
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(785441..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795287,795539..795977))
location: region:785441-795977:-1
so has part: feature:795539-795977:-1:exon
so has part: feature:795208-795287:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:785441-786677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795539-795977:-1:exon

position:795539:-1
position: 795539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795208-795287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:785441-786677:-1:exon

ccdc106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: ccdc106
product: coiled-coil domain containing 106, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_023988646.1
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(785441..786677,787524..787827,790984..791154,793667..793723,794566..794796,794986..795084,795208..795287,795543..795976))
location: region:785441-795976:-1
so has part: feature:795543-795976:-1:exon
so has part: feature:795208-795287:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:785441-786677:-1:exon

position:795976:-1
position: 795976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795543-795976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:795208-795287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:785441-786677:-1:exon

ccdc106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: ccdc106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 106 isoform X3
translation: MQEGNINDALPTSKNHTGTHPMQTPKNEDAYEISIPFEENNFEQQGFFNQNEQSFDESPPPSGAPPPGSSYLLITNLRTQLQISLEKNSWLHKRIEDLEEERDFLRCQLDRFIFSTKTQGHQNQGPSESQYSNGYDSRRFEWKPRREGERPADSLSLLGEAEEFLEQDGYMNEEEMISGEDVMSEGMSSGGHPGMKRRRVFRITRERQRVKDAAGVLFRYKKILLTYQRLKNMSKAFQIHGVDRNTVASTTPIAEMLLVAPEKVXEVGEFDPSKEKLLDYARRCYVALDEETLSRVQALKKNNLLLPISYRLKGGEDSLKEKETHATTN
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(786620..786677,787524..787827,790984..791154,793667..793723,794566..794796,794986..795084,795208..795277))
location: region:786620-795277:-1
so has part: feature:795208-795277:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:786620-786677:-1:exon

XP_023844414.1
type: Protein
SIO_000068: ncbiprotein

position:786620:-1
position: 786620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795277:-1
position: 795277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795208-795277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:786620-786677:-1:exon

ccdc106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: ccdc106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 106 isoform X1
translation: MQEGNINDALPTSKNHTGTHPMQTPKNEDAYEISIPFEENNFEQQGFFNQNEQSFDESPPPSGAPPPGSSYLLITNLRTQLQISLEKNSWLHKRIEDLEEERDFLRCQLDRFIFSTKTQGHQNQGPSESQYSNGYDSRRFEWKPRREGERPAEQKSEPQRFTSRQIFQRRPSPTAMAPPKNHTSSTIANQMAAMSSMFSSGASQTLLQGHSSGSSSANRATMSDMNAHGSIGPDSLSLLGEAEEFLEQDGYMNEEEMISGEDVMSEGMSSGGHPGMKRRRVFRITRERQRVKDAAGVLFRYKKILLTYQRLKNMSKAFQIHGVDRNTVASTTPIAEMLLVAPEKVXEVGEFDPSKEKLLDYARRCYVALDEETLSRVQALKKNNLLLPISYRLKGGEDSLKEKETHATTN
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(786620..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795277))
location: region:786620-795277:-1
so has part: feature:795208-795277:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:786620-786677:-1:exon

XP_023844407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:795208-795277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786620-786677:-1:exon

ccdc106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: ccdc106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 106 isoform X1
translation: MQEGNINDALPTSKNHTGTHPMQTPKNEDAYEISIPFEENNFEQQGFFNQNEQSFDESPPPSGAPPPGSSYLLITNLRTQLQISLEKNSWLHKRIEDLEEERDFLRCQLDRFIFSTKTQGHQNQGPSESQYSNGYDSRRFEWKPRREGERPAEQKSEPQRFTSRQIFQRRPSPTAMAPPKNHTSSTIANQMAAMSSMFSSGASQTLLQGHSSGSSSANRATMSDMNAHGSIGPDSLSLLGEAEEFLEQDGYMNEEEMISGEDVMSEGMSSGGHPGMKRRRVFRITRERQRVKDAAGVLFRYKKILLTYQRLKNMSKAFQIHGVDRNTVASTTPIAEMLLVAPEKVXEVGEFDPSKEKLLDYARRCYVALDEETLSRVQALKKNNLLLPISYRLKGGEDSLKEKETHATTN
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(786620..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795277))
location: region:786620-795277:-1
so has part: feature:795208-795277:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:786620-786677:-1:exon

XP_023844408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:795208-795277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786620-786677:-1:exon

ccdc106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: ccdc106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 106 isoform X1
translation: MQEGNINDALPTSKNHTGTHPMQTPKNEDAYEISIPFEENNFEQQGFFNQNEQSFDESPPPSGAPPPGSSYLLITNLRTQLQISLEKNSWLHKRIEDLEEERDFLRCQLDRFIFSTKTQGHQNQGPSESQYSNGYDSRRFEWKPRREGERPAEQKSEPQRFTSRQIFQRRPSPTAMAPPKNHTSSTIANQMAAMSSMFSSGASQTLLQGHSSGSSSANRATMSDMNAHGSIGPDSLSLLGEAEEFLEQDGYMNEEEMISGEDVMSEGMSSGGHPGMKRRRVFRITRERQRVKDAAGVLFRYKKILLTYQRLKNMSKAFQIHGVDRNTVASTTPIAEMLLVAPEKVXEVGEFDPSKEKLLDYARRCYVALDEETLSRVQALKKNNLLLPISYRLKGGEDSLKEKETHATTN
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(786620..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795277))
location: region:786620-795277:-1
so has part: feature:795208-795277:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:786620-786677:-1:exon

XP_023844410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:795208-795277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786620-786677:-1:exon

ccdc106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: ccdc106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 106 isoform X1
translation: MQEGNINDALPTSKNHTGTHPMQTPKNEDAYEISIPFEENNFEQQGFFNQNEQSFDESPPPSGAPPPGSSYLLITNLRTQLQISLEKNSWLHKRIEDLEEERDFLRCQLDRFIFSTKTQGHQNQGPSESQYSNGYDSRRFEWKPRREGERPAEQKSEPQRFTSRQIFQRRPSPTAMAPPKNHTSSTIANQMAAMSSMFSSGASQTLLQGHSSGSSSANRATMSDMNAHGSIGPDSLSLLGEAEEFLEQDGYMNEEEMISGEDVMSEGMSSGGHPGMKRRRVFRITRERQRVKDAAGVLFRYKKILLTYQRLKNMSKAFQIHGVDRNTVASTTPIAEMLLVAPEKVXEVGEFDPSKEKLLDYARRCYVALDEETLSRVQALKKNNLLLPISYRLKGGEDSLKEKETHATTN
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(786620..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795277))
location: region:786620-795277:-1
so has part: feature:795208-795277:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:786620-786677:-1:exon

XP_023844411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:795208-795277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786620-786677:-1:exon

ccdc106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: ccdc106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 106 isoform X1
translation: MQEGNINDALPTSKNHTGTHPMQTPKNEDAYEISIPFEENNFEQQGFFNQNEQSFDESPPPSGAPPPGSSYLLITNLRTQLQISLEKNSWLHKRIEDLEEERDFLRCQLDRFIFSTKTQGHQNQGPSESQYSNGYDSRRFEWKPRREGERPAEQKSEPQRFTSRQIFQRRPSPTAMAPPKNHTSSTIANQMAAMSSMFSSGASQTLLQGHSSGSSSANRATMSDMNAHGSIGPDSLSLLGEAEEFLEQDGYMNEEEMISGEDVMSEGMSSGGHPGMKRRRVFRITRERQRVKDAAGVLFRYKKILLTYQRLKNMSKAFQIHGVDRNTVASTTPIAEMLLVAPEKVXEVGEFDPSKEKLLDYARRCYVALDEETLSRVQALKKNNLLLPISYRLKGGEDSLKEKETHATTN
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(786620..786677,787524..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795277))
location: region:786620-795277:-1
so has part: feature:795208-795277:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787524-787827:-1:exon
so has part: feature:786620-786677:-1:exon

XP_023844412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:795208-795277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787524-787827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786620-786677:-1:exon

ccdc106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: ccdc106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 106 isoform X2
translation: MQEGNINDALPTSKNHTGTHPMQTPKNEDAYEISIPFEENNFEQQGFFNQNEQSFDESPPPSGAPPPGSSYLLITNLRTQLQISLEKNSWLHKRIEDLEEERDFLRCQLDRFIFSTKTQGHQNQGPSESQYSNGYDSRRFEWKPRREGERPAEQKSEPQRFTSRQIFQRRPSPTAMAPPKNHTSSTIANQMAAMSSMFSSGASQTLLQGHSSGSSSANRATMSDMNAHGSIGPDSLSLLGEAEEFLEQDGYMNEEEMISGEDVMSEGMSSGGHPGMKRRRVFRITRERQRVKDAAGVLFRYKKILLTYQRLKNMSKAFQIHGVDRNTVASTTPIAEMLLVAPEKVXEVGEFDPSKEKLLDYARRCYVALDEETLSRVQALKKNNLLLPISYRFRH
SIO_010081: ccdc106
subclass of: SO_0000673
so part of: ccdc106
location: complement(join(787511..787827,790984..791154,793264..793506,793667..793723,794566..794796,794986..795084,795208..795277))
location: region:787511-795277:-1
so has part: feature:795208-795277:-1:exon
so has part: feature:794986-795084:-1:exon
so has part: feature:794566-794796:-1:exon
so has part: feature:793667-793723:-1:exon
so has part: feature:793264-793506:-1:exon
so has part: feature:790984-791154:-1:exon
so has part: feature:787511-787827:-1:exon

XP_023844413.1
type: Protein
SIO_000068: ncbiprotein

position:787511:-1
position: 787511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795208-795277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794986-795084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794566-794796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793667-793723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793264-793506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790984-791154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787511-787827:-1:exon

LOC111964584
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(799023..820827)
location: region:799023-820827:-1
so has part: feature:799023-820827:-1:exon
subclass of: SO_0000010

111964584
type: Gene
SIO_000068: ncbigene

position:799023:-1
position: 799023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820827:-1
position: 820827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799023-820827:-1:exon

LOC111964584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964584
product: C-Jun-amino-terminal kinase-interacting protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988431.2
SIO_010081: LOC111964584
subclass of: SO_0000673
so part of: LOC111964584
location: complement(join(799023..800172,801146..801244,801343..801456,801650..801821,801917..802065,803363..803429,803578..803594,803762..803803,804023..804117,808355..808401,808513..808602,810992..811076,811221..811301,811405..811447,811655..811796,812347..812394,812500..812586,815679..815814,816225..816365,816673..816726,817138..817265,817386..817422,817542..817694,817950..818007,818343..818593,818862..819037,819131..819200,819359..819426,819601..819671,820794..820827))
location: region:799023-820827:-1
so has part: feature:820794-820827:-1:exon
so has part: feature:819601-819671:-1:exon
so has part: feature:819359-819426:-1:exon
so has part: feature:819131-819200:-1:exon
so has part: feature:818862-819037:-1:exon
so has part: feature:818343-818593:-1:exon
so has part: feature:817950-818007:-1:exon
so has part: feature:817542-817694:-1:exon
so has part: feature:817386-817422:-1:exon
so has part: feature:817138-817265:-1:exon
so has part: feature:816673-816726:-1:exon
so has part: feature:816225-816365:-1:exon
so has part: feature:815679-815814:-1:exon
so has part: feature:812500-812586:-1:exon
so has part: feature:812347-812394:-1:exon
so has part: feature:811655-811796:-1:exon
so has part: feature:811405-811447:-1:exon
so has part: feature:811221-811301:-1:exon
so has part: feature:810992-811076:-1:exon
so has part: feature:808513-808602:-1:exon
so has part: feature:808355-808401:-1:exon
so has part: feature:804023-804117:-1:exon
so has part: feature:803762-803803:-1:exon
so has part: feature:803578-803594:-1:exon
so has part: feature:803363-803429:-1:exon
so has part: feature:801917-802065:-1:exon
so has part: feature:801650-801821:-1:exon
so has part: feature:801343-801456:-1:exon
so has part: feature:801146-801244:-1:exon
so has part: feature:799023-800172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:820794-820827:-1:exon

position:820794:-1
position: 820794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:819601-819671:-1:exon

position:819601:-1
position: 819601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819671:-1
position: 819671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:819359-819426:-1:exon

position:819359:-1
position: 819359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819426:-1
position: 819426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:819131-819200:-1:exon

position:819131:-1
position: 819131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819200:-1
position: 819200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:818862-819037:-1:exon

position:818862:-1
position: 818862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819037:-1
position: 819037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:818343-818593:-1:exon

position:818343:-1
position: 818343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818593:-1
position: 818593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:817950-818007:-1:exon

position:817950:-1
position: 817950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818007:-1
position: 818007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:817542-817694:-1:exon

position:817542:-1
position: 817542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817694:-1
position: 817694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:817386-817422:-1:exon

position:817386:-1
position: 817386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817422:-1
position: 817422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:817138-817265:-1:exon

position:817138:-1
position: 817138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817265:-1
position: 817265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:816673-816726:-1:exon

position:816673:-1
position: 816673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816726:-1
position: 816726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:816225-816365:-1:exon

position:816225:-1
position: 816225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816365:-1
position: 816365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:815679-815814:-1:exon

position:815679:-1
position: 815679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815814:-1
position: 815814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:812500-812586:-1:exon

position:812500:-1
position: 812500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812586:-1
position: 812586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:812347-812394:-1:exon

position:812347:-1
position: 812347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812394:-1
position: 812394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:811655-811796:-1:exon

position:811655:-1
position: 811655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811796:-1
position: 811796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:811405-811447:-1:exon

position:811405:-1
position: 811405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811447:-1
position: 811447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:811221-811301:-1:exon

position:811221:-1
position: 811221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811301:-1
position: 811301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:810992-811076:-1:exon

position:810992:-1
position: 810992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811076:-1
position: 811076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:808513-808602:-1:exon

position:808513:-1
position: 808513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808602:-1
position: 808602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:808355-808401:-1:exon

position:808355:-1
position: 808355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808401:-1
position: 808401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:804023-804117:-1:exon

position:804023:-1
position: 804023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804117:-1
position: 804117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:803762-803803:-1:exon

position:803762:-1
position: 803762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803803:-1
position: 803803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:803578-803594:-1:exon

position:803578:-1
position: 803578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803594:-1
position: 803594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:803363-803429:-1:exon

position:803363:-1
position: 803363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803429:-1
position: 803429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:801917-802065:-1:exon

position:801917:-1
position: 801917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802065:-1
position: 802065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:801650-801821:-1:exon

position:801650:-1
position: 801650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801821:-1
position: 801821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:801343-801456:-1:exon

position:801343:-1
position: 801343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801456:-1
position: 801456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:801146-801244:-1:exon

position:801146:-1
position: 801146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801244:-1
position: 801244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:799023-800172:-1:exon

position:800172:-1
position: 800172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-Jun-amino-terminal kinase-interacting protein 4
translation: MDLERARSPLSNHVRSKNSQSTQGQSESCVSGQELTDQRPETPPDSVLLEEPVTKDDRVIDIVVMPDRDASFINDIISSTPELVKFHGLMKASTPVRADAKEPIRDKTSMGEEINEVAEKEGEKEEKKEEGAKQEMEDEDMDSLEWELRNTESVFSELSELSQEYIESVDQGPSVRGSTDQFEEILSQYEDLKHTHELVNAARKALISRVEELTNERSALKVEVTSCQETVTRLEGRMKEMEEETKRLRKELESNKSDDSSLTISLRRFSRSEMSRVVMEKNQYKERLFELQEAVRRSQTIRATQEERITERERTSVWRRFNRLFGLNKNPLVPSAALALTLPTSPSLTHSPMGSPRQLAVSTTQTDGASPAAALSPRVRRRELYERNPPHVWEPWENASSWLEACPLSHTQDSSDPTPEPKDVPVLVQLRLLDQRDSTAKLNCAVAVTPEISGETTCAVWVVSGPASSSDVTVINPARSNTVLDQFSLPPTSPALCICAVPPTGETSGTVWIGTQEGSVLVHSASTARRRCLQSISLSEGVHSLTYSQGQVIAGLANGTLAFFSHNPGNSPSQDSSDPTPEPKDVPVLVAAQTAWNQRDSTAKLTCVVAVTPEISGETTSDVTVINPARSNTVLDQFSLPPTSPALCICGCETQELCGLELRKEGCALSHVFTGQVIAGLANGTLAFFSHNPGGWDLQSHEVLPLGSSPLQPIRCCLAKGACLWVGYWNRVHVVDVENRKVEQTLTVSERSEQQVRFLCAAGSGVWTSCRLDPTLRLFDWSTGRPLQDVDLTPLVTKTLGPAFLSLSPLQISSLTFISGRLWVGTGSGAIFSIPVSLSSESASIPYCSLAAAQLCYHGHRQAVKFIIAAPGCVTSSSTIGGGAVTLVSTSQLILSGGEGYINFRIGELRTSRGCH
SIO_010081: LOC111964584
subclass of: SO_0000673
so part of: LOC111964584
location: complement(join(800036..800172,801146..801244,801343..801456,801650..801821,801917..802065,803363..803429,803578..803594,803762..803803,804023..804117,808355..808401,808513..808602,810992..811076,811221..811301,811405..811447,811655..811796,812347..812394,812500..812586,815679..815814,816225..816365,816673..816726,817138..817265,817386..817422,817542..817694,817950..818007,818343..818593,818862..819037,819131..819200,819359..819390))
location: region:800036-819390:-1
so has part: feature:819359-819390:-1:exon
so has part: feature:819131-819200:-1:exon
so has part: feature:818862-819037:-1:exon
so has part: feature:818343-818593:-1:exon
so has part: feature:817950-818007:-1:exon
so has part: feature:817542-817694:-1:exon
so has part: feature:817386-817422:-1:exon
so has part: feature:817138-817265:-1:exon
so has part: feature:816673-816726:-1:exon
so has part: feature:816225-816365:-1:exon
so has part: feature:815679-815814:-1:exon
so has part: feature:812500-812586:-1:exon
so has part: feature:812347-812394:-1:exon
so has part: feature:811655-811796:-1:exon
so has part: feature:811405-811447:-1:exon
so has part: feature:811221-811301:-1:exon
so has part: feature:810992-811076:-1:exon
so has part: feature:808513-808602:-1:exon
so has part: feature:808355-808401:-1:exon
so has part: feature:804023-804117:-1:exon
so has part: feature:803762-803803:-1:exon
so has part: feature:803578-803594:-1:exon
so has part: feature:803363-803429:-1:exon
so has part: feature:801917-802065:-1:exon
so has part: feature:801650-801821:-1:exon
so has part: feature:801343-801456:-1:exon
so has part: feature:801146-801244:-1:exon
so has part: feature:800036-800172:-1:exon

XP_023844199.1
type: Protein
SIO_000068: ncbiprotein

position:800036:-1
position: 800036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819390:-1
position: 819390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819359-819390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:819131-819200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:818862-819037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:818343-818593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:817950-818007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:817542-817694:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:817386-817422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817138-817265:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:816673-816726:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:816225-816365:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:815679-815814:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:812500-812586:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:812347-812394:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811655-811796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:811405-811447:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:811221-811301:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:810992-811076:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:808513-808602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:808355-808401:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:804023-804117:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:803762-803803:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:803578-803594:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:803363-803429:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:801917-802065:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:801650-801821:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:801343-801456:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:801146-801244:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:800036-800172:-1:exon

LOC111964708
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821115..823058)
location: region:821115-823058:-1
so has part: feature:821115-823058:-1:exon
subclass of: SO_0000011

111964708
type: Gene
SIO_000068: ncbigene

position:821115:-1
position: 821115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823058:-1
position: 823058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821115-823058:-1:exon

LOC111964708
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964708
product: uncharacterized LOC111964708, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_002877417.2
SIO_010081: LOC111964708
subclass of: SO_0000673
so part of: LOC111964708
location: complement(join(821115..821290,821447..821826,822864..823058))
location: region:821115-823058:-1
so has part: feature:822864-823058:-1:exon
so has part: feature:821447-821826:-1:exon
so has part: feature:821115-821290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822864-823058:-1:exon

position:822864:-1
position: 822864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821447-821826:-1:exon

position:821447:-1
position: 821447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821826:-1
position: 821826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:821115-821290:-1:exon

position:821290:-1
position: 821290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964708
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964708
product: uncharacterized LOC111964708, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_002877416.2
SIO_010081: LOC111964708
subclass of: SO_0000673
so part of: LOC111964708
location: complement(join(821115..821290,821447..821826,822555..822600,822864..823058))
location: region:821115-823058:-1
so has part: feature:822864-823058:-1:exon
so has part: feature:822555-822600:-1:exon
so has part: feature:821447-821826:-1:exon
so has part: feature:821115-821290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822864-823058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822555-822600:-1:exon

position:822555:-1
position: 822555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822600:-1
position: 822600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:821447-821826:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:821115-821290:-1:exon

LOC111964709
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(825762..827376)
location: region:825762-827376:-1
so has part: feature:825762-827376:-1:exon
subclass of: SO_0000010

111964709
type: Gene
SIO_000068: ncbigene

position:825762:-1
position: 825762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827376:-1
position: 827376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825762-827376:-1:exon

LOC111964709
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964709
product: transmembrane protein 100, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_023988542.1
SIO_010081: LOC111964709
subclass of: SO_0000673
so part of: LOC111964709
location: complement(join(825762..826637,826977..827376))
location: region:825762-827376:-1
so has part: feature:826977-827376:-1:exon
so has part: feature:825762-826637:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826977-827376:-1:exon

position:826977:-1
position: 826977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:825762-826637:-1:exon

position:826637:-1
position: 826637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964709
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964709
product: transmembrane protein 100, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_023988541.1
SIO_010081: LOC111964709
subclass of: SO_0000673
so part of: LOC111964709
location: complement(join(825762..826706,826977..827376))
location: region:825762-827376:-1
so has part: feature:826977-827376:-1:exon
so has part: feature:825762-826706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826977-827376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:825762-826706:-1:exon

position:826706:-1
position: 826706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964709
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 100
translation: MDTLDPSALPGATTAVTYDSKSEMVTLPGGVVSVAGITVITGGAELSCGSCMLAFGVWGTLIGLSVVALGIWDQSVQVGGRTSHLLGLGLVVLAISFGVVGSVVGFRFLTKRGDITREEREDGKVVLIGERGRSVKKTVTV
SIO_010081: LOC111964709
subclass of: SO_0000673
so part of: LOC111964709
location: complement(825967..826392)
location: region:825967-826392:-1
so has part: feature:825967-826392:-1:exon

XP_023844309.1
type: Protein
SIO_000068: ncbiprotein

position:825967:-1
position: 825967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826392:-1
position: 826392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825967-826392:-1:exon

LOC111964709
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 100
translation: MDTLDPSALPGATTAVTYDSKSEMVTLPGGVVSVAGITVITGGAELSCGSCMLAFGVWGTLIGLSVVALGIWDQSVQVGGRTSHLLGLGLVVLAISFGVVGSVVGFRFLTKRGDITREEREDGKVVLIGERGRSVKKTVTV
SIO_010081: LOC111964709
subclass of: SO_0000673
so part of: LOC111964709
location: complement(825967..826392)
location: region:825967-826392:-1
so has part: feature:825967-826392:-1:exon

XP_023844310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:825967-826392:-1:exon

LOC111964585
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 837361..846539
location: region:837361-846539:1
so has part: feature:837361-846539:1:exon
subclass of: SO_0000010

111964585
type: Gene
SIO_000068: ncbigene

position:837361:1
position: 837361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846539:1
position: 846539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837361-846539:1:exon

LOC111964585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964585
product: recoverin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988432.1
SIO_010081: LOC111964585
subclass of: SO_0000673
so part of: LOC111964585
location: join(837361..837427,837592..838129,840129..840135,846451..846539)
location: region:837361-846539:1
so has part: feature:837361-837427:1:exon
so has part: feature:837592-838129:1:exon
so has part: feature:840129-840135:1:exon
so has part: feature:846451-846539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837361-837427:1:exon

position:837427:1
position: 837427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:837592-838129:1:exon

position:837592:1
position: 837592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838129:1
position: 838129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:840129-840135:1:exon

position:840129:1
position: 840129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840135:1
position: 840135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846451-846539:1:exon

position:846451:1
position: 846451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: recoverin
translation: MGNAKSSAISKEILEDLKLXTKFTENELCQWYENFQKQCPTGRISPEEFETIYARFFPDSEAKTYAQHVFRSFDTNEDGTLDFKEYIIALHMTSSGKTTRKLEWAFSLFDVDKNGYITKTEVEVICQIANRLAEGEFIKGVTENENAMRLIHYEPITD
SIO_010081: LOC111964585
subclass of: SO_0000673
so part of: LOC111964585
location: join(837749..838129,840129..840135,846451..846539)
location: region:837749-846539:1
so has part: feature:837749-838129:1:exon
so has part: feature:840129-840135:1:exon
so has part: feature:846451-846539:1:exon

XP_023844200.1
type: Protein
SIO_000068: ncbiprotein

position:837749:1
position: 837749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837749-838129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:840129-840135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846451-846539:1:exon

LOC111964833
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(852634..854461)
location: region:852634-854461:-1
so has part: feature:852634-854461:-1:exon
subclass of: SO_0000010

111964833
type: Gene
SIO_000068: ncbigene

position:852634:-1
position: 852634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854461:-1
position: 854461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852634-854461:-1:exon

LOC111964833
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964833
product: germ cell-specific gene 1-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_023988647.1
SIO_010081: LOC111964833
subclass of: SO_0000673
so part of: LOC111964833
location: complement(join(852634..853181,853285..853396,853609..853761,854420..854461))
location: region:852634-854461:-1
so has part: feature:854420-854461:-1:exon
so has part: feature:853609-853761:-1:exon
so has part: feature:853285-853396:-1:exon
so has part: feature:852634-853181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854420-854461:-1:exon

position:854420:-1
position: 854420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:853609-853761:-1:exon

position:853609:-1
position: 853609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853761:-1
position: 853761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:853285-853396:-1:exon

position:853285:-1
position: 853285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853396:-1
position: 853396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:852634-853181:-1:exon

position:853181:-1
position: 853181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964833
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: germ cell-specific gene 1-like protein
translation: MGFLLMWLELLCSHKEIHALKINAYAAICTVLSGLMGMVAHMMYTTVFQMTVIVGPKDWRPQTWDYGWSFALAWISFSCCMGAAVFTLNSYTKTIIELRHKQRLRLEEARTASHXPPYBEVVPGSGLYSVSGLLQCPBGMIDVAWAPDGTVMGVGNGDVPTLVLLGGCGPEGCEDCEREMDEMEEAMERERADSPC
SIO_010081: LOC111964833
subclass of: SO_0000673
so part of: LOC111964833
location: complement(join(852803..853181,853285..853396,853609..853708))
location: region:852803-853708:-1
so has part: feature:853609-853708:-1:exon
so has part: feature:853285-853396:-1:exon
so has part: feature:852803-853181:-1:exon

XP_023844415.1
type: Protein
SIO_000068: ncbiprotein

position:852803:-1
position: 852803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853708:-1
position: 853708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853609-853708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853285-853396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:852803-853181:-1:exon

atg12
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: atg12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(859952..863303)
location: region:859952-863303:-1
so has part: feature:859952-863303:-1:exon
subclass of: SO_0000010

111964835
type: Gene
SIO_000068: ncbigene

position:859952:-1
position: 859952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863303:-1
position: 863303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859952-863303:-1:exon

atg12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: atg12
product: autophagy related 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023988652.1
SIO_010081: atg12
subclass of: SO_0000673
so part of: atg12
location: complement(join(859952..860164,860931..860993,862113..862249,863145..863303))
location: region:859952-863303:-1
so has part: feature:863145-863303:-1:exon
so has part: feature:862113-862249:-1:exon
so has part: feature:860931-860993:-1:exon
so has part: feature:859952-860164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863145-863303:-1:exon

position:863145:-1
position: 863145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:862113-862249:-1:exon

position:862113:-1
position: 862113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862249:-1
position: 862249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:860931-860993:-1:exon

position:860931:-1
position: 860931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860993:-1
position: 860993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859952-860164:-1:exon

position:860164:-1
position: 860164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

atg12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: atg12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like protein ATG12
translation: MSDNAESPTETQKDEPSTPQQPTEDSGTADEKKKIDVLLKAVGDTPIMKTKKWSVEKGRTVQSLSQFISRFLKMEANEQLFIYVNQSFSPSPDQEVGVLFECFGSDGKLVLHYCKSQAWG
SIO_010081: atg12
subclass of: SO_0000673
so part of: atg12
location: complement(join(860105..860164,860931..860993,862113..862249,863145..863247))
location: region:860105-863247:-1
so has part: feature:863145-863247:-1:exon
so has part: feature:862113-862249:-1:exon
so has part: feature:860931-860993:-1:exon
so has part: feature:860105-860164:-1:exon

XP_023844420.1
type: Protein
SIO_000068: ncbiprotein

position:860105:-1
position: 860105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863247:-1
position: 863247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863145-863247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862113-862249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:860931-860993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:860105-860164:-1:exon

isoc2
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: isoc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 862645..865507
location: region:862645-865507:1
so has part: feature:862645-865507:1:exon
subclass of: SO_0000010

111964834
type: Gene
SIO_000068: ncbigene

position:862645:1
position: 862645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865507:1
position: 865507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862645-865507:1:exon

isoc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: isoc2
product: isochorismatase domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_023988650.1
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: join(862645..863116,863643..863740,864161..864285,864403..864615,864795..864865,865005..865122,865338..865507)
location: region:862645-865507:1
so has part: feature:862645-863116:1:exon
so has part: feature:863643-863740:1:exon
so has part: feature:864161-864285:1:exon
so has part: feature:864403-864615:1:exon
so has part: feature:864795-864865:1:exon
so has part: feature:865005-865122:1:exon
so has part: feature:865338-865507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:862645-863116:1:exon

position:863116:1
position: 863116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863643-863740:1:exon

position:863643:1
position: 863643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863740:1
position: 863740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864161-864285:1:exon

position:864161:1
position: 864161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864285:1
position: 864285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:864403-864615:1:exon

position:864403:1
position: 864403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864615:1
position: 864615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864795-864865:1:exon

position:864795:1
position: 864795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864865:1
position: 864865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:865005-865122:1:exon

position:865005:1
position: 865005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865122:1
position: 865122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:865338-865507:1:exon

position:865338:1
position: 865338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

isoc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: isoc2
product: isochorismatase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_023988648.1
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: join(863377..863464,863643..863740,864161..864285,864403..864615,864795..864865,865005..865122,865338..865507)
location: region:863377-865507:1
so has part: feature:863377-863464:1:exon
so has part: feature:863643-863740:1:exon
so has part: feature:864161-864285:1:exon
so has part: feature:864403-864615:1:exon
so has part: feature:864795-864865:1:exon
so has part: feature:865005-865122:1:exon
so has part: feature:865338-865507:1:exon

position:863377:1
position: 863377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863377-863464:1:exon

position:863464:1
position: 863464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863643-863740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864161-864285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864403-864615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864795-864865:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865005-865122:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865338-865507:1:exon

isoc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: isoc2
product: isochorismatase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023988649.1
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: join(863471..863740,864161..864285,864403..864615,864795..864865,865005..865122,865338..865507)
location: region:863471-865507:1
so has part: feature:863471-863740:1:exon
so has part: feature:864161-864285:1:exon
so has part: feature:864403-864615:1:exon
so has part: feature:864795-864865:1:exon
so has part: feature:865005-865122:1:exon
so has part: feature:865338-865507:1:exon

position:863471:1
position: 863471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863471-863740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864161-864285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864403-864615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864795-864865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865005-865122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865338-865507:1:exon

isoc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: isoc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isochorismatase domain-containing protein 2
translation: MAGIGRLSTKGSVLLLCDMQEKFRPNIFQFTNIVSNAARLLQAARVLGIPPIVTEQYPKGLGPTVPELGAGDLTAHAKTKFTMMIEPVEKELKALGDPKIAILCGIETQACIACTTFDLLEKGMEVHIVADAVSSRSQTDRLFALSRLRQSGAFLTTTEAVLLQLVQDAKHPNFREIQKLLVQPSPDTALLAFFSSL
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: join(863740,864161..864285,864403..864615,864795..864865,865005..865122,865338..865403)
location: region:863740-865403:1
so has part: feature:863740-863740:1:exon
so has part: feature:864161-864285:1:exon
so has part: feature:864403-864615:1:exon
so has part: feature:864795-864865:1:exon
so has part: feature:865005-865122:1:exon
so has part: feature:865338-865403:1:exon

XP_023844416.1
type: Protein
SIO_000068: ncbiprotein

position:865403:1
position: 865403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863740-863740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864161-864285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864403-864615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864795-864865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865005-865122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865338-865403:1:exon

isoc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: isoc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isochorismatase domain-containing protein 2
translation: MAGIGRLSTKGSVLLLCDMQEKFRPNIFQFTNIVSNAARLLQAARVLGIPPIVTEQYPKGLGPTVPELGAGDLTAHAKTKFTMMIEPVEKELKALGDPKIAILCGIETQACIACTTFDLLEKGMEVHIVADAVSSRSQTDRLFALSRLRQSGAFLTTTEAVLLQLVQDAKHPNFREIQKLLVQPSPDTALLAFFSSL
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: join(863740,864161..864285,864403..864615,864795..864865,865005..865122,865338..865403)
location: region:863740-865403:1
so has part: feature:863740-863740:1:exon
so has part: feature:864161-864285:1:exon
so has part: feature:864403-864615:1:exon
so has part: feature:864795-864865:1:exon
so has part: feature:865005-865122:1:exon
so has part: feature:865338-865403:1:exon

XP_023844417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:863740-863740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864161-864285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864403-864615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864795-864865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865005-865122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865338-865403:1:exon

isoc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: isoc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isochorismatase domain-containing protein 2
translation: MAGIGRLSTKGSVLLLCDMQEKFRPNIFQFTNIVSNAARLLQAARVLGIPPIVTEQYPKGLGPTVPELGAGDLTAHAKTKFTMMIEPVEKELKALGDPKIAILCGIETQACIACTTFDLLEKGMEVHIVADAVSSRSQTDRLFALSRLRQSGAFLTTTEAVLLQLVQDAKHPNFREIQKLLVQPSPDTALLAFFSSL
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: join(863740,864161..864285,864403..864615,864795..864865,865005..865122,865338..865403)
location: region:863740-865403:1
so has part: feature:863740-863740:1:exon
so has part: feature:864161-864285:1:exon
so has part: feature:864403-864615:1:exon
so has part: feature:864795-864865:1:exon
so has part: feature:865005-865122:1:exon
so has part: feature:865338-865403:1:exon

XP_023844418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:863740-863740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864161-864285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864403-864615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864795-864865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865005-865122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865338-865403:1:exon

LOC111964586
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 866161..870589
location: region:866161-870589:1
so has part: feature:866161-870589:1:exon
subclass of: SO_0000010

111964586
type: Gene
SIO_000068: ncbigene

position:866161:1
position: 866161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870589:1
position: 870589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866161-870589:1:exon

LOC111964586
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964586
product: forkhead box protein J2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988433.2
SIO_010081: LOC111964586
subclass of: SO_0000673
so part of: LOC111964586
location: join(866161..866435,866662..867073,867184..867258,867510..867953,868059..868172,868317..868584,868695..868835,868986..869087,869225..869560,870047..870589)
location: region:866161-870589:1
so has part: feature:866161-866435:1:exon
so has part: feature:866662-867073:1:exon
so has part: feature:867184-867258:1:exon
so has part: feature:867510-867953:1:exon
so has part: feature:868059-868172:1:exon
so has part: feature:868317-868584:1:exon
so has part: feature:868695-868835:1:exon
so has part: feature:868986-869087:1:exon
so has part: feature:869225-869560:1:exon
so has part: feature:870047-870589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866161-866435:1:exon

position:866435:1
position: 866435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:866662-867073:1:exon

position:866662:1
position: 866662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867073:1
position: 867073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867184-867258:1:exon

position:867184:1
position: 867184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867258:1
position: 867258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:867510-867953:1:exon

position:867510:1
position: 867510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867953:1
position: 867953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:868059-868172:1:exon

position:868059:1
position: 868059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868172:1
position: 868172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:868317-868584:1:exon

position:868317:1
position: 868317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868584:1
position: 868584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:868695-868835:1:exon

position:868695:1
position: 868695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868835:1
position: 868835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:868986-869087:1:exon

position:868986:1
position: 868986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869087:1
position: 869087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:869225-869560:1:exon

position:869225:1
position: 869225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869560:1
position: 869560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:870047-870589:1:exon

position:870047:1
position: 870047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964586
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein J2
translation: MSSNLDSSLTSIDWLPQLGISSLXSGRERGGEEGERKKERGRERSDLPPPIPAPFPSSGSKAKPPHSYATLIAMAIGAAPSRKLSLNDIYMWISDMFPYYSRSGRGWKNSIRHNLSLNKCFRKVPRPQSDPGKGSYWMMDGPSEPNPLRGTKRPYPAEEEEGSIQVPNVSVMQAEKQHSPQTDHYTPLASPQRDHYTPLASPQTDHYTPLASPQTDHYTPLASPQTDHYRPLASPQTDHYMPLASPQTDHYRPLASPQTDHYRPLASPQEPSQQLSPPPCKQRPPYMQSPVSSLPVPHETVSPSTASATLPSLSVPHSLSTSHSTVSSSVSPQTLPSSVPALSVPTLSVPAFSVPSLSVPSLNVAPTYASSHSCDPLLRFSFSDLNLPDLYTSFQSLCRSVRERVTSQSDVGPLFVLTNDSTSLHTPTLPPLSPHLVPSVAPGPPPEADRLSHSSVVPADWFSTTDTLKESFRVASSLDWANIDLTSHPDLLESMRQAELCDWALEPTLFTSLCDSLNRFFTQKGLIGSSSGNNSPLAHGAPQSLLLPPLTHNTPTLATLTHPSPLAPPSSSGQPPRRPLHPQTQGVQRPHLTQTEALQTNAGIQLQPKPRPPMKHLHNNSEEIQDDFDWDSLIA
SIO_010081: LOC111964586
subclass of: SO_0000673
so part of: LOC111964586
location: join(866750..867073,867184..867258,867510..867953,868059..868172,868317..868584,868695..868835,868986..869087,869225..869560,870047..870150)
location: region:866750-870150:1
so has part: feature:866750-867073:1:exon
so has part: feature:867184-867258:1:exon
so has part: feature:867510-867953:1:exon
so has part: feature:868059-868172:1:exon
so has part: feature:868317-868584:1:exon
so has part: feature:868695-868835:1:exon
so has part: feature:868986-869087:1:exon
so has part: feature:869225-869560:1:exon
so has part: feature:870047-870150:1:exon

XP_023844201.1
type: Protein
SIO_000068: ncbiprotein

position:866750:1
position: 866750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870150:1
position: 870150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866750-867073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867184-867258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867510-867953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:868059-868172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:868317-868584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:868695-868835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868986-869087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:869225-869560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:870047-870150:1:exon

LOC111964836
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(870664..893352)
location: region:870664-893352:-1
so has part: feature:870664-893352:-1:exon
subclass of: SO_0000010

111964836
type: Gene
SIO_000068: ncbigene

position:870664:-1
position: 870664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893352:-1
position: 893352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870664-893352:-1:exon

LOC111964836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964836
product: epsin-1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023988659.1
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(870664..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,893272..893352))
location: region:870664-893352:-1
so has part: feature:893272-893352:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:870664-872473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893272-893352:-1:exon

position:893272:-1
position: 893272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:881665-881767:-1:exon

position:881665:-1
position: 881665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881767:-1
position: 881767
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:878462-878620:-1:exon

position:878462:-1
position: 878462
reference: sequence
type: ReverseStrandPosition
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position:878620:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:877089-877217:-1:exon

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position: 877089
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:876628-876748:-1:exon

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position: 876628
reference: sequence
type: ReverseStrandPosition
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position:876748:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:876210-876370:-1:exon

position:876210:-1
position: 876210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876370:-1
position: 876370
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:875861-875932:-1:exon

position:875861:-1
position: 875861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875932:-1
position: 875932
reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:874642-874725:-1:exon

position:874642:-1
position: 874642
reference: sequence
type: ReverseStrandPosition
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position:874725:-1
position: 874725
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:873739-874030:-1:exon

position:873739:-1
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reference: sequence
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position:874030:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:873039-873197:-1:exon

position:873039:-1
position: 873039
reference: sequence
type: ReverseStrandPosition
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position:873197:-1
position: 873197
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:872575-872811:-1:exon

position:872575:-1
position: 872575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872811:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:870664-872473:-1:exon

position:872473:-1
position: 872473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964836
product: epsin-1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_023988660.1
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(870664..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,891099..891242,893272..893341))
location: region:870664-893341:-1
so has part: feature:893272-893341:-1:exon
so has part: feature:891099-891242:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:870664-872473:-1:exon

position:893341:-1
position: 893341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893272-893341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891099-891242:-1:exon

position:891099:-1
position: 891099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891242:-1
position: 891242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:870664-872473:-1:exon

LOC111964836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964836
product: epsin-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_023988654.1
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(870664..872473,872575..872811,873039..873197,873739..874030,874642..874725,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,893046..893265))
location: region:870664-893265:-1
so has part: feature:893046-893265:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:870664-872473:-1:exon

position:893265:-1
position: 893265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893046-893265:-1:exon

position:893046:-1
position: 893046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:870664-872473:-1:exon

LOC111964836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964836
product: epsin-1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_023988655.1
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(870664..872473,872575..872811,873039..873197,873739..874030,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,893046..893265))
location: region:870664-893265:-1
so has part: feature:893046-893265:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:870664-872473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893046-893265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:870664-872473:-1:exon

LOC111964836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964836
product: epsin-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023988653.1
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(870664..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,893046..893265))
location: region:870664-893265:-1
so has part: feature:893046-893265:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:870664-872473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893046-893265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:870664-872473:-1:exon

LOC111964836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964836
product: epsin-1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_023988656.1
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(870664..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,892893..893265))
location: region:870664-893265:-1
so has part: feature:892893-893265:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:870664-872473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892893-893265:-1:exon

position:892893:-1
position: 892893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:870664-872473:-1:exon

LOC111964836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964836
product: epsin-1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_023988658.1
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(870664..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,891127..891242,892893..893265))
location: region:870664-893265:-1
so has part: feature:892893-893265:-1:exon
so has part: feature:891127-891242:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:870664-872473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892893-893265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891127-891242:-1:exon

position:891127:-1
position: 891127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:870664-872473:-1:exon

LOC111964836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964836
product: epsin-1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_023988657.1
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(870664..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,891099..891242,892893..893265))
location: region:870664-893265:-1
so has part: feature:892893-893265:-1:exon
so has part: feature:891099-891242:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:870664-872473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892893-893265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891099-891242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:870664-872473:-1:exon

LOC111964836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsin-1 isoform X2
translation: MLRMVVSLDQIINTTPILLPLELLATAFNVISSVCTIGYFSFLARFSVEPDSQTVAMSTSSLRRQVKNIVHNFSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVAQQCRENIYAVQTLKDFQFIDRDGKDQGVNVREKAKQLVTLLKDEERLREERIHALKTKEKMAQTTSASSAPSAPGLGXGALSQGSHSGGADPEQAWPQSSGEEDLQLQLALAMSKEEAEQEERLRRGDDLRLQMAIEESRMEKAKPEESALMELSAVDPWGAPAAASGGSAGPSPPPTVPLPAPSASGPWGLAPADPWGASSPASPPSVDPWASGGTAPPTIAPPPDPWGETASRVNSVDPWGPSAVTPPSVDPWGPSVPLSTTSSFGGPIDPWAGDGVDPIITSDPWSDSAKHTNGTGHPELRGQLTGDSAGSPVPFDLTSLCSSLPVRKTPESFLGPNASLVDLDSLVSSKPKPKQPPPPSISSSSTHNPFLQTTASSSAPGMAVTPGSTVSSRGVSPTPPPTSNPFGAAAPMSSISPQPSTLGLSGLRTSPVPPNPMAYPGMGMGPMGMGAPGLGMGMMQSPMGMSPYGGLSPMGPPGPSHFMGSGGALPPQLNFGGPTGAAGVMGAGGAVGGAGVTGASTNPFLL
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(872016..872473,872575..872811,873039..873197,873739..874030,874642..874725,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,893046..893179))
location: region:872016-893179:-1
so has part: feature:893046-893179:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:872016-872473:-1:exon

XP_023844422.1
type: Protein
SIO_000068: ncbiprotein

position:872016:-1
position: 872016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893179:-1
position: 893179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893046-893179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872016-872473:-1:exon

LOC111964836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsin-1 isoform X3
translation: MLRMVVSLDQIINTTPILLPLELLATAFNVISSVCTIGYFSFLARFSVEPDSQTVAMSTSSLRRQVKNIVHNFSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVAQQCRENIYAVQTLKDFQFIDRDGKDQGVNVREKAKQLVTLLKDEERLREERIHALKTKEKMAQTTSASSAPSAPGLGXGALSQGSHSGGADPEQAWPQSSGEEDLQLQLALAMSKEEAEQTTVAPLEDAELRYALTLSKEVQEQSALMELSAVDPWGAPAAASGGSAGPSPPPTVPLPAPSASGPWGLAPADPWGASSPASPPSVDPWASGGTAPPTIAPPPDPWGETASRVNSVDPWGPSAVTPPSVDPWGPSVPLSTTSSFGGPIDPWAGDGVDPIITSDPWSDSAKHTNGTGHPELRGQLTGDSAGSPVPFDLTSLCSSLPVRKTPESFLGPNASLVDLDSLVSSKPKPKQPPPPSISSSSTHNPFLQTTASSSAPGMAVTPGSTVSSRGVSPTPPPTSNPFGAAAPMSSISPQPSTLGLSGLRTSPVPPNPMAYPGMGMGPMGMGAPGLGMGMMQSPMGMSPYGGLSPMGPPGPSHFMGSGGALPPQLNFGGPTGAAGVMGAGGAVGGAGVTGASTNPFLL
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(872016..872473,872575..872811,873039..873197,873739..874030,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,893046..893179))
location: region:872016-893179:-1
so has part: feature:893046-893179:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:872016-872473:-1:exon

XP_023844423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:893046-893179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872016-872473:-1:exon

LOC111964836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsin-1 isoform X1
translation: MLRMVVSLDQIINTTPILLPLELLATAFNVISSVCTIGYFSFLARFSVEPDSQTVAMSTSSLRRQVKNIVHNFSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVAQQCRENIYAVQTLKDFQFIDRDGKDQGVNVREKAKQLVTLLKDEERLREERIHALKTKEKMAQTTSASSAPSAPGLGXGALSQGSHSGGADPEQAWPQSSGEEDLQLQLALAMSKEEAEQTTVAPLEDAELRYALTLSKEVQEQEERLRRGDDLRLQMAIEESRMEKAKPEESALMELSAVDPWGAPAAASGGSAGPSPPPTVPLPAPSASGPWGLAPADPWGASSPASPPSVDPWASGGTAPPTIAPPPDPWGETASRVNSVDPWGPSAVTPPSVDPWGPSVPLSTTSSFGGPIDPWAGDGVDPIITSDPWSDSAKHTNGTGHPELRGQLTGDSAGSPVPFDLTSLCSSLPVRKTPESFLGPNASLVDLDSLVSSKPKPKQPPPPSISSSSTHNPFLQTTASSSAPGMAVTPGSTVSSRGVSPTPPPTSNPFGAAAPMSSISPQPSTLGLSGLRTSPVPPNPMAYPGMGMGPMGMGAPGLGMGMMQSPMGMSPYGGLSPMGPPGPSHFMGSGGALPPQLNFGGPTGAAGVMGAGGAVGGAGVTGASTNPFLL
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(872016..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881767,893046..893179))
location: region:872016-893179:-1
so has part: feature:893046-893179:-1:exon
so has part: feature:881665-881767:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:872016-872473:-1:exon

XP_023844421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:893046-893179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881665-881767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872016-872473:-1:exon

LOC111964836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsin-1 isoform X4
translation: MSTSSLRRQVKNIVHNFSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVAQQCRENIYAVQTLKDFQFIDRDGKDQGVNVREKAKQLVTLLKDEERLREERIHALKTKEKMAQTTSASSAPSAPGLGXGALSQGSHSGGADPEQAWPQSSGEEDLQLQLALAMSKEEAEQTTVAPLEDAELRYALTLSKEVQEQEERLRRGDDLRLQMAIEESRMEKAKPEESALMELSAVDPWGAPAAASGGSAGPSPPPTVPLPAPSASGPWGLAPADPWGASSPASPPSVDPWASGGTAPPTIAPPPDPWGETASRVNSVDPWGPSAVTPPSVDPWGPSVPLSTTSSFGGPIDPWAGDGVDPIITSDPWSDSAKHTNGTGHPELRGQLTGDSAGSPVPFDLTSLCSSLPVRKTPESFLGPNASLVDLDSLVSSKPKPKQPPPPSISSSSTHNPFLQTTASSSAPGMAVTPGSTVSSRGVSPTPPPTSNPFGAAAPMSSISPQPSTLGLSGLRTSPVPPNPMAYPGMGMGPMGMGAPGLGMGMMQSPMGMSPYGGLSPMGPPGPSHFMGSGGALPPQLNFGGPTGAAGVMGAGGAVGGAGVTGASTNPFLL
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(872016..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881733))
location: region:872016-881733:-1
so has part: feature:881665-881733:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:872016-872473:-1:exon

XP_023844424.1
type: Protein
SIO_000068: ncbiprotein

position:881733:-1
position: 881733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881665-881733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872016-872473:-1:exon

LOC111964836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsin-1 isoform X4
translation: MSTSSLRRQVKNIVHNFSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVAQQCRENIYAVQTLKDFQFIDRDGKDQGVNVREKAKQLVTLLKDEERLREERIHALKTKEKMAQTTSASSAPSAPGLGXGALSQGSHSGGADPEQAWPQSSGEEDLQLQLALAMSKEEAEQTTVAPLEDAELRYALTLSKEVQEQEERLRRGDDLRLQMAIEESRMEKAKPEESALMELSAVDPWGAPAAASGGSAGPSPPPTVPLPAPSASGPWGLAPADPWGASSPASPPSVDPWASGGTAPPTIAPPPDPWGETASRVNSVDPWGPSAVTPPSVDPWGPSVPLSTTSSFGGPIDPWAGDGVDPIITSDPWSDSAKHTNGTGHPELRGQLTGDSAGSPVPFDLTSLCSSLPVRKTPESFLGPNASLVDLDSLVSSKPKPKQPPPPSISSSSTHNPFLQTTASSSAPGMAVTPGSTVSSRGVSPTPPPTSNPFGAAAPMSSISPQPSTLGLSGLRTSPVPPNPMAYPGMGMGPMGMGAPGLGMGMMQSPMGMSPYGGLSPMGPPGPSHFMGSGGALPPQLNFGGPTGAAGVMGAGGAVGGAGVTGASTNPFLL
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(872016..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881733))
location: region:872016-881733:-1
so has part: feature:881665-881733:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:872016-872473:-1:exon

XP_023844425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:881665-881733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872016-872473:-1:exon

LOC111964836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsin-1 isoform X4
translation: MSTSSLRRQVKNIVHNFSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVAQQCRENIYAVQTLKDFQFIDRDGKDQGVNVREKAKQLVTLLKDEERLREERIHALKTKEKMAQTTSASSAPSAPGLGXGALSQGSHSGGADPEQAWPQSSGEEDLQLQLALAMSKEEAEQTTVAPLEDAELRYALTLSKEVQEQEERLRRGDDLRLQMAIEESRMEKAKPEESALMELSAVDPWGAPAAASGGSAGPSPPPTVPLPAPSASGPWGLAPADPWGASSPASPPSVDPWASGGTAPPTIAPPPDPWGETASRVNSVDPWGPSAVTPPSVDPWGPSVPLSTTSSFGGPIDPWAGDGVDPIITSDPWSDSAKHTNGTGHPELRGQLTGDSAGSPVPFDLTSLCSSLPVRKTPESFLGPNASLVDLDSLVSSKPKPKQPPPPSISSSSTHNPFLQTTASSSAPGMAVTPGSTVSSRGVSPTPPPTSNPFGAAAPMSSISPQPSTLGLSGLRTSPVPPNPMAYPGMGMGPMGMGAPGLGMGMMQSPMGMSPYGGLSPMGPPGPSHFMGSGGALPPQLNFGGPTGAAGVMGAGGAVGGAGVTGASTNPFLL
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(872016..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881733))
location: region:872016-881733:-1
so has part: feature:881665-881733:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:872016-872473:-1:exon

XP_023844426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:881665-881733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872016-872473:-1:exon

LOC111964836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsin-1 isoform X4
translation: MSTSSLRRQVKNIVHNFSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVAQQCRENIYAVQTLKDFQFIDRDGKDQGVNVREKAKQLVTLLKDEERLREERIHALKTKEKMAQTTSASSAPSAPGLGXGALSQGSHSGGADPEQAWPQSSGEEDLQLQLALAMSKEEAEQTTVAPLEDAELRYALTLSKEVQEQEERLRRGDDLRLQMAIEESRMEKAKPEESALMELSAVDPWGAPAAASGGSAGPSPPPTVPLPAPSASGPWGLAPADPWGASSPASPPSVDPWASGGTAPPTIAPPPDPWGETASRVNSVDPWGPSAVTPPSVDPWGPSVPLSTTSSFGGPIDPWAGDGVDPIITSDPWSDSAKHTNGTGHPELRGQLTGDSAGSPVPFDLTSLCSSLPVRKTPESFLGPNASLVDLDSLVSSKPKPKQPPPPSISSSSTHNPFLQTTASSSAPGMAVTPGSTVSSRGVSPTPPPTSNPFGAAAPMSSISPQPSTLGLSGLRTSPVPPNPMAYPGMGMGPMGMGAPGLGMGMMQSPMGMSPYGGLSPMGPPGPSHFMGSGGALPPQLNFGGPTGAAGVMGAGGAVGGAGVTGASTNPFLL
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(872016..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881733))
location: region:872016-881733:-1
so has part: feature:881665-881733:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:872016-872473:-1:exon

XP_023844427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:881665-881733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872016-872473:-1:exon

LOC111964836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsin-1 isoform X4
translation: MSTSSLRRQVKNIVHNFSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVAQQCRENIYAVQTLKDFQFIDRDGKDQGVNVREKAKQLVTLLKDEERLREERIHALKTKEKMAQTTSASSAPSAPGLGXGALSQGSHSGGADPEQAWPQSSGEEDLQLQLALAMSKEEAEQTTVAPLEDAELRYALTLSKEVQEQEERLRRGDDLRLQMAIEESRMEKAKPEESALMELSAVDPWGAPAAASGGSAGPSPPPTVPLPAPSASGPWGLAPADPWGASSPASPPSVDPWASGGTAPPTIAPPPDPWGETASRVNSVDPWGPSAVTPPSVDPWGPSVPLSTTSSFGGPIDPWAGDGVDPIITSDPWSDSAKHTNGTGHPELRGQLTGDSAGSPVPFDLTSLCSSLPVRKTPESFLGPNASLVDLDSLVSSKPKPKQPPPPSISSSSTHNPFLQTTASSSAPGMAVTPGSTVSSRGVSPTPPPTSNPFGAAAPMSSISPQPSTLGLSGLRTSPVPPNPMAYPGMGMGPMGMGAPGLGMGMMQSPMGMSPYGGLSPMGPPGPSHFMGSGGALPPQLNFGGPTGAAGVMGAGGAVGGAGVTGASTNPFLL
SIO_010081: LOC111964836
subclass of: SO_0000673
so part of: LOC111964836
location: complement(join(872016..872473,872575..872811,873039..873197,873739..874030,874642..874725,875861..875932,876210..876370,876628..876748,877089..877217,878462..878620,881665..881733))
location: region:872016-881733:-1
so has part: feature:881665-881733:-1:exon
so has part: feature:878462-878620:-1:exon
so has part: feature:877089-877217:-1:exon
so has part: feature:876628-876748:-1:exon
so has part: feature:876210-876370:-1:exon
so has part: feature:875861-875932:-1:exon
so has part: feature:874642-874725:-1:exon
so has part: feature:873739-874030:-1:exon
so has part: feature:873039-873197:-1:exon
so has part: feature:872575-872811:-1:exon
so has part: feature:872016-872473:-1:exon

XP_023844428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:881665-881733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878462-878620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877089-877217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876628-876748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876210-876370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875861-875932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874642-874725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873739-874030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873039-873197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872575-872811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872016-872473:-1:exon

LOC112081097
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112081097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 908135..912660
location: region:908135-912660:1
so has part: feature:908135-912660:1:exon

112081097
type: Gene
SIO_000068: ncbigene

position:908135:1
position: 908135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912660:1
position: 912660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908135-912660:1:exon

LOC112081097
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112081097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112081097
subclass of: SO_0000673
so part of: LOC112081097
location: 908135..908405
location: region:908135-908405:1
so has part: feature:908135-908405:1:exon

position:908405:1
position: 908405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908135-908405:1:exon

LOC112081097
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112081097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112081097
subclass of: SO_0000673
so part of: LOC112081097
location: 910178..910382
location: region:910178-910382:1
so has part: feature:910178-910382:1:exon

position:910178:1
position: 910178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910382:1
position: 910382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910178-910382:1:exon

LOC112081097
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112081097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112081097
subclass of: SO_0000673
so part of: LOC112081097
location: 911441..911686
location: region:911441-911686:1
so has part: feature:911441-911686:1:exon

position:911441:1
position: 911441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911686:1
position: 911686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911441-911686:1:exon

LOC112081097
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112081097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112081097
subclass of: SO_0000673
so part of: LOC112081097
location: 911718..911926
location: region:911718-911926:1
so has part: feature:911718-911926:1:exon

position:911718:1
position: 911718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911926:1
position: 911926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911718-911926:1:exon

LOC112081097
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC112081097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112081097
subclass of: SO_0000673
so part of: LOC112081097
location: 912017..912660
location: region:912017-912660:1
so has part: feature:912017-912660:1:exon

position:912017:1
position: 912017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912017-912660:1:exon

LOC111964711
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 943303..944064
location: region:943303-944064:1
so has part: feature:943303-944064:1:exon
subclass of: SO_0000011

111964711
type: Gene
SIO_000068: ncbigene

position:943303:1
position: 943303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944064:1
position: 944064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943303-944064:1:exon

LOC111964711
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964711
product: uncharacterized LOC111964711
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XR_002877418.2
SIO_010081: LOC111964711
subclass of: SO_0000673
so part of: LOC111964711
location: join(943303..943640,943754..943786,943919..944064)
location: region:943303-944064:1
so has part: feature:943303-943640:1:exon
so has part: feature:943754-943786:1:exon
so has part: feature:943919-944064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:943303-943640:1:exon

position:943640:1
position: 943640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:943754-943786:1:exon

position:943754:1
position: 943754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943786:1
position: 943786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:943919-944064:1:exon

position:943919:1
position: 943919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964838
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(947499..957109)
location: region:947499-957109:-1
so has part: feature:947499-957109:-1:exon
subclass of: SO_0000010

111964838
type: Gene
SIO_000068: ncbigene

position:947499:-1
position: 947499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957109:-1
position: 957109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947499-957109:-1:exon

LOC111964838
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964838
product: adaptin ear-binding coat-associated protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_023988664.2
SIO_010081: LOC111964838
subclass of: SO_0000673
so part of: LOC111964838
location: complement(join(947499..948417,948494..948599,951305..951369,951466..951659,952567..952675,953982..954063,955193..955297,955910..956010,956987..957109))
location: region:947499-957109:-1
so has part: feature:956987-957109:-1:exon
so has part: feature:955910-956010:-1:exon
so has part: feature:955193-955297:-1:exon
so has part: feature:953982-954063:-1:exon
so has part: feature:952567-952675:-1:exon
so has part: feature:951466-951659:-1:exon
so has part: feature:951305-951369:-1:exon
so has part: feature:948494-948599:-1:exon
so has part: feature:947499-948417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:956987-957109:-1:exon

position:956987:-1
position: 956987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:955910-956010:-1:exon

position:955910:-1
position: 955910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956010:-1
position: 956010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:955193-955297:-1:exon

position:955193:-1
position: 955193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955297:-1
position: 955297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:953982-954063:-1:exon

position:953982:-1
position: 953982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954063:-1
position: 954063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:952567-952675:-1:exon

position:952567:-1
position: 952567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952675:-1
position: 952675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:951466-951659:-1:exon

position:951466:-1
position: 951466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951659:-1
position: 951659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:951305-951369:-1:exon

position:951305:-1
position: 951305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951369:-1
position: 951369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:948494-948599:-1:exon

position:948494:-1
position: 948494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948599:-1
position: 948599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:947499-948417:-1:exon

position:948417:-1
position: 948417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964838
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adaptin ear-binding coat-associated protein 1-like
translation: MATEGEYESILCVKPDVNVYRIPPRASNRGVRAADWKLDAPDWTGRMRVTARGKVAFIKLEDKISGELFAQAPVEEYPGIAIETVSDSSRYFVLRIQDESGRSAFIGIGFGDRGDSFDFNVALQDHFKWVKQELEISKQSQTPDNTPKLDLGFKEGQTITLNIGQGRKRDKSRPQSAGGFGLLPPPPGGGGTKIAPPPMSSSSNDNEGLFSGGDLFSAGSDSFSEGSDTFSGGNNTFSAGSDMFSGGSNTGCLLDLDSSNSNSVVQPNPNPTSGSDMWGDFSAPEKSMSPLANDDGSTNWQQF
SIO_010081: LOC111964838
subclass of: SO_0000673
so part of: LOC111964838
location: complement(join(948363..948417,948494..948599,951305..951369,951466..951659,952567..952675,953982..954063,955193..955297,955910..956010,956987..957081))
location: region:948363-957081:-1
so has part: feature:956987-957081:-1:exon
so has part: feature:955910-956010:-1:exon
so has part: feature:955193-955297:-1:exon
so has part: feature:953982-954063:-1:exon
so has part: feature:952567-952675:-1:exon
so has part: feature:951466-951659:-1:exon
so has part: feature:951305-951369:-1:exon
so has part: feature:948494-948599:-1:exon
so has part: feature:948363-948417:-1:exon

XP_023844432.1
type: Protein
SIO_000068: ncbiprotein

position:948363:-1
position: 948363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957081:-1
position: 957081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956987-957081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:955910-956010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:955193-955297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953982-954063:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:952567-952675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:951466-951659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:951305-951369:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:948494-948599:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:948363-948417:-1:exon

LOC112081092
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112081092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(957450..959087)
location: region:957450-959087:-1
so has part: feature:957450-959087:-1:exon
subclass of: SO_0000010

112081092
type: Gene
SIO_000068: ncbigene

position:957450:-1
position: 957450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959087:-1
position: 959087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957450-959087:-1:exon

LOC112081092
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC112081092
product: single-stranded DNA cytosine deaminase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024147108.1
SIO_010081: LOC112081092
subclass of: SO_0000673
so part of: LOC112081092
location: complement(join(957450..957664,957753..957868,957963..958251,959007..959087))
location: region:957450-959087:-1
so has part: feature:959007-959087:-1:exon
so has part: feature:957963-958251:-1:exon
so has part: feature:957753-957868:-1:exon
so has part: feature:957450-957664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959007-959087:-1:exon

position:959007:-1
position: 959007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:957963-958251:-1:exon

position:957963:-1
position: 957963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958251:-1
position: 958251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:957753-957868:-1:exon

position:957753:-1
position: 957753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957868:-1
position: 957868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957450-957664:-1:exon

position:957664:-1
position: 957664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112081092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC112081092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: single-stranded DNA cytosine deaminase-like
translation: MVKLELDQVVMRRMREDDIETVKAIIKLLFLRLLEAGALCPGLWGYGAPDSVGLCYSVTWFCSWSPCSDCSYRLAQFLSQTPNLRLRIYVSRLYFCDPEDSSAREGLRMLQRAGVQITVMNYEDYFYCWQTFVACRQRVFKAWDGLHQNSVQLARKLNDILQPGEAEDWGDAFELLGL
SIO_010081: LOC112081092
subclass of: SO_0000673
so part of: LOC112081092
location: complement(join(957614..957664,957753..957868,957963..958251,959007..959087))
location: region:957614-959087:-1
so has part: feature:959007-959087:-1:exon
so has part: feature:957963-958251:-1:exon
so has part: feature:957753-957868:-1:exon
so has part: feature:957614-957664:-1:exon

XP_024002876.1
type: Protein
SIO_000068: ncbiprotein

position:957614:-1
position: 957614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959007-959087:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957963-958251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957753-957868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957614-957664:-1:exon

LOC111964587
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(961924..970423)
location: region:961924-970423:-1
so has part: feature:961924-970423:-1:exon
subclass of: SO_0000010

111964587
type: Gene
SIO_000068: ncbigene

position:961924:-1
position: 961924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970423:-1
position: 970423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961924-970423:-1:exon

LOC111964587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964587
product: zinc finger protein 628
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024147109.1
SIO_010081: LOC111964587
subclass of: SO_0000673
so part of: LOC111964587
location: complement(join(961924..961932,962117..962995,965697..965939,966299..966453,966631..966985,967400..967573,967774..968631,968789..968861,969182..969788,969928..970075,970248..970423))
location: region:961924-970423:-1
so has part: feature:970248-970423:-1:exon
so has part: feature:969928-970075:-1:exon
so has part: feature:969182-969788:-1:exon
so has part: feature:968789-968861:-1:exon
so has part: feature:967774-968631:-1:exon
so has part: feature:967400-967573:-1:exon
so has part: feature:966631-966985:-1:exon
so has part: feature:966299-966453:-1:exon
so has part: feature:965697-965939:-1:exon
so has part: feature:962117-962995:-1:exon
so has part: feature:961924-961932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970248-970423:-1:exon

position:970248:-1
position: 970248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:969928-970075:-1:exon

position:969928:-1
position: 969928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970075:-1
position: 970075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:969182-969788:-1:exon

position:969182:-1
position: 969182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969788:-1
position: 969788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:968789-968861:-1:exon

position:968789:-1
position: 968789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968861:-1
position: 968861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:967774-968631:-1:exon

position:967774:-1
position: 967774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968631:-1
position: 968631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:967400-967573:-1:exon

position:967400:-1
position: 967400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967573:-1
position: 967573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:966631-966985:-1:exon

position:966631:-1
position: 966631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966985:-1
position: 966985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:966299-966453:-1:exon

position:966299:-1
position: 966299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966453:-1
position: 966453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:965697-965939:-1:exon

position:965697:-1
position: 965697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965939:-1
position: 965939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:962117-962995:-1:exon

position:962117:-1
position: 962117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962995:-1
position: 962995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:961924-961932:-1:exon

position:961932:-1
position: 961932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 628
translation: MTPGKKRHSSTNTNTHTYINTKHTTFYSLIVSCLNMANSALVVQAELLPPQSSSSLSPFPSLQGPGEGEEDRVREEEADGEKGMVEGGEDIVLTGVGVQMVTSSVLAAPHLQEHPEHPFQCLDCGKSFKWSSRLAHHQRSHNNERPYRCNLCPKAFKGSSALLYHQRSHSGEKPYKCEDCDKAFKRSSLLQVHRSVHTGLRTFQCPYCPLTFKWSSHYQYHLRQHTGECPYPCDSCPKAFKNSSSLRRHKNVHLGLKPYVCTVCTKAFTQSTNLRQHMRIHTGERPYICGECGRSFTHSSNLALHRNSQSHTGEGKGGETGGGNMGDEIQEVIVGEDVTSQMLTDMGFVSQEATVGVGVGEVFLSSGHQTLLPHLTPTQGGVCTSRAIGTEVHVSTESGASVLLYSCGSCSQTFSTRTELEDHQAMHLGPGEEGGSGVGEGGGVGHLLADFEEVVETTTAAAENGHTTAELLGLTGGNMGTTQAQFDLLQSFTVGAQIPTDSVETGGNTTGTGTECAYCGKSFKTSGGLNRHLAQVHSLSPSQSRSQFSCSACDRSFTLLSSLLTHQHSHTPEQRLLAEAEAEIVCPASLSLSLPLPSSPSQGXQHQDTQGEIHVSLMAVTEEGDREMVKPSTRAVVKGQRXGAASKTAGGNNERPYRCSECGKAFKGSSGLRYHMRDHTGERPYRCTECGKSFKRSSLLSIHQRVHTGVRAFQCPYCPLTFKWSSHYQYHLRQHTGERPYVCQECGKSFKNSSCLRRHSQLHSGLRPHICPICSKSFSQTSNLKQHERTHSGERPFQCAQCHKRFTHSSNLQLHLRTHSSRKDYKCPFCGKEFVMQSYLQRHMRTHGNGAVAGDAGVGGKEGGRAGGGVTTTTTLLNPITLETTGNSGSLIVSQPALDIPPNTSQNYFMIQTANGLQLIPLSAPAPPPPPPPPPQTQYILLQCPSTNGSQPSLILVPTTATNPQPTLEPQGLPLVQTVLNPAQTQMQHFQTISQQQQQPRFIITTXNNNVNNPPVAKTTTPSLNSMLNKPILGKSTRTARSRRGRKPKAXVGRXTXTSVAXTTTSVTMTTAPXSQSGDDP
SIO_010081: LOC111964587
subclass of: SO_0000673
so part of: LOC111964587
location: complement(join(961924..961932,962117..962995,965697..965939,966299..966453,966631..966985,967400..967573,967774..968631,968789..968861,969182..969681))
location: region:961924-969681:-1
so has part: feature:969182-969681:-1:exon
so has part: feature:968789-968861:-1:exon
so has part: feature:967774-968631:-1:exon
so has part: feature:967400-967573:-1:exon
so has part: feature:966631-966985:-1:exon
so has part: feature:966299-966453:-1:exon
so has part: feature:965697-965939:-1:exon
so has part: feature:962117-962995:-1:exon
so has part: feature:961924-961932:-1:exon

XP_024002877.1
type: Protein
SIO_000068: ncbiprotein

position:969681:-1
position: 969681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969182-969681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:968789-968861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967774-968631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967400-967573:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:966631-966985:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966299-966453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:965697-965939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962117-962995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:961924-961932:-1:exon

LOC111964588
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(970821..1018042)
location: region:970821-1018042:-1
so has part: feature:970821-1018042:-1:exon
subclass of: SO_0000010

111964588
type: Gene
SIO_000068: ncbigene

position:970821:-1
position: 970821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018042:-1
position: 1018042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970821-1018042:-1:exon

LOC111964588
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964588
product: interleukin-11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024147110.1
SIO_010081: LOC111964588
subclass of: SO_0000673
so part of: LOC111964588
location: complement(join(970821..972514,972808..972969,975907..976073,1017979..1018042))
location: region:970821-1018042:-1
so has part: feature:1017979-1018042:-1:exon
so has part: feature:975907-976073:-1:exon
so has part: feature:972808-972969:-1:exon
so has part: feature:970821-972514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1017979-1018042:-1:exon

position:1017979:-1
position: 1017979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:975907-976073:-1:exon

position:975907:-1
position: 975907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976073:-1
position: 976073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:972808-972969:-1:exon

position:972808:-1
position: 972808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972969:-1
position: 972969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:970821-972514:-1:exon

position:972514:-1
position: 972514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964588
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-11
translation: MVLPWLRKQMTTTLMMMLAVQVLVDSSSSLLLSLLLAQLPLFTSAVPAPYRRPNVVHELDRLANQTKNLRQITADLLMRPTLSQLHADLKSFEHHFAWLSRASRKHHHPALPKLGQMMSLIKSLTSMLEHQMMRVDAQRLSPPSPSMPPHPSQFDVLQSSQELLLQFRLFCDWAQRVFSVLSTKSKMSEYNDDS
SIO_010081: LOC111964588
subclass of: SO_0000673
so part of: LOC111964588
location: complement(join(972323..972514,972808..972969,975907..976073,1017979..1018042))
location: region:972323-1018042:-1
so has part: feature:1017979-1018042:-1:exon
so has part: feature:975907-976073:-1:exon
so has part: feature:972808-972969:-1:exon
so has part: feature:972323-972514:-1:exon

XP_024002878.1
type: Protein
SIO_000068: ncbiprotein

position:972323:-1
position: 972323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017979-1018042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:975907-976073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972808-972969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:972323-972514:-1:exon

LOC111964840
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1018673..1028714)
location: region:1018673-1028714:-1
so has part: feature:1018673-1028714:-1:exon
subclass of: SO_0000010

111964840
type: Gene
SIO_000068: ncbigene

position:1018673:-1
position: 1018673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028714:-1
position: 1028714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018673-1028714:-1:exon

LOC111964840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964840
product: ras-interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988667.1
SIO_010081: LOC111964840
subclass of: SO_0000673
so part of: LOC111964840
location: complement(join(1018673..1019149,1021244..1021385,1021842..1022005,1022349..1022643,1022754..1022866,1023192..1023346,1024021..1024061,1024576..1024737,1024954..1025252,1025593..1025797,1026207..1026380,1026494..1026738,1026860..1027120,1027524..1027969,1028514..1028714))
location: region:1018673-1028714:-1
so has part: feature:1028514-1028714:-1:exon
so has part: feature:1027524-1027969:-1:exon
so has part: feature:1026860-1027120:-1:exon
so has part: feature:1026494-1026738:-1:exon
so has part: feature:1026207-1026380:-1:exon
so has part: feature:1025593-1025797:-1:exon
so has part: feature:1024954-1025252:-1:exon
so has part: feature:1024576-1024737:-1:exon
so has part: feature:1024021-1024061:-1:exon
so has part: feature:1023192-1023346:-1:exon
so has part: feature:1022754-1022866:-1:exon
so has part: feature:1022349-1022643:-1:exon
so has part: feature:1021842-1022005:-1:exon
so has part: feature:1021244-1021385:-1:exon
so has part: feature:1018673-1019149:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028514-1028714:-1:exon

position:1028514:-1
position: 1028514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1027524-1027969:-1:exon

position:1027524:-1
position: 1027524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027969:-1
position: 1027969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1026860-1027120:-1:exon

position:1026860:-1
position: 1026860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027120:-1
position: 1027120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1026494-1026738:-1:exon

position:1026494:-1
position: 1026494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026738:-1
position: 1026738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1026207-1026380:-1:exon

position:1026207:-1
position: 1026207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026380:-1
position: 1026380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1025593-1025797:-1:exon

position:1025593:-1
position: 1025593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025797:-1
position: 1025797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1024954-1025252:-1:exon

position:1024954:-1
position: 1024954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025252:-1
position: 1025252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1024576-1024737:-1:exon

position:1024576:-1
position: 1024576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024737:-1
position: 1024737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1024021-1024061:-1:exon

position:1024021:-1
position: 1024021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024061:-1
position: 1024061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1023192-1023346:-1:exon

position:1023192:-1
position: 1023192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023346:-1
position: 1023346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1022754-1022866:-1:exon

position:1022754:-1
position: 1022754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022866:-1
position: 1022866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1022349-1022643:-1:exon

position:1022349:-1
position: 1022349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022643:-1
position: 1022643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1021842-1022005:-1:exon

position:1021842:-1
position: 1021842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022005:-1
position: 1022005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1021244-1021385:-1:exon

position:1021244:-1
position: 1021244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021385:-1
position: 1021385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1018673-1019149:-1:exon

position:1019149:-1
position: 1019149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-interacting protein 1
translation: MDQMEGTDSPRFRKLHFPVGLWINSPRKHFAKLGGRWPSAVSVKSTTSSDAASLHEAPSAPSSSLSISTPSLAPPSPSPSPAFLRPRPAGPQSRTKRLSHLFLRGRSNSDRDKAIGEKEREVWAHSAAPSSHHYLPPASSTAPGLIKIYGDALSSGANYRSLLATSHSTAKQLIAQVITRYTEREREETXDAALQKHSPEDFLLCDVIGKPIQQPDGAVQWETECRRGVAEWECPLLLVDMWRPKDGFERRFEIQRRDDYEKEEREKEKEREREGENHTGVRWRRSRIQSGGGAEEGERGHRGRNSXLRRSISDMNLSLRRRQGNHVGNDPRRSGNHPNNSAGLQDRKNIVSMIAPLEHGEMMRSKVRDEVERRNKADKAVEEEKDYSACDLEVMSQSLILPPTDRPYFLLLQGYDQSKDFVLYIMAGHTHVFGRKPTMREREKDRERERKGKRPLKVETFLSAPDMLARHLLVRRDSAVPDAPSGQALMRPFRGGVVTHNGEALYREAVLKPGDVIGIGGHFLFLYRDPRVTPAPPLVLVLPWQADVPSTCCLSGLVDRQEALRQYLGSTEALLRFQPRHTDALLQEIISKNSSPDSEGGPLAPAFLLSIMIDHASKHLDPXLTPXLLLKAANQIKGIVWDNIKEFGDKHPTQNSTEQEVELSAPSAQKLSSDLRPLMFWMSNATELLNFFQVKAEAMERDWEFEAPGDPVLSADLDTCSEALAQLDDVIMHTFQQCVYHLTKTLYSLLPALLDNNPFSSLEKEKERDEAREMDGGEGGGGEGEGDDVSSLPPTVAGLVEVYRCSLMLSREACLSPPLTSQTFGYLFFFTNTSLLNTLLERDGLFSWSRAVQIRTNLDLVLDWLQGAGLGDIASEFLKKLSVTVNFLCVPKTRLIQSSWASLQEDHALLSPTQLYHLLTHYKLGPARAPPASWAPPPGTELSGDIFESFLDHPPLILPNETPQLDLSQPIPSPELQKEVTRLRNFLWGLDQDELPANQRTRL
SIO_010081: LOC111964840
subclass of: SO_0000673
so part of: LOC111964840
location: complement(join(1018971..1019149,1021244..1021385,1021842..1022005,1022349..1022643,1022754..1022866,1023192..1023346,1024021..1024061,1024576..1024737,1024954..1025252,1025593..1025797,1026207..1026380,1026494..1026738,1026860..1027120,1027524..1027969,1028514..1028644))
location: region:1018971-1028644:-1
so has part: feature:1028514-1028644:-1:exon
so has part: feature:1027524-1027969:-1:exon
so has part: feature:1026860-1027120:-1:exon
so has part: feature:1026494-1026738:-1:exon
so has part: feature:1026207-1026380:-1:exon
so has part: feature:1025593-1025797:-1:exon
so has part: feature:1024954-1025252:-1:exon
so has part: feature:1024576-1024737:-1:exon
so has part: feature:1024021-1024061:-1:exon
so has part: feature:1023192-1023346:-1:exon
so has part: feature:1022754-1022866:-1:exon
so has part: feature:1022349-1022643:-1:exon
so has part: feature:1021842-1022005:-1:exon
so has part: feature:1021244-1021385:-1:exon
so has part: feature:1018971-1019149:-1:exon

XP_023844435.1
type: Protein
SIO_000068: ncbiprotein

position:1018971:-1
position: 1018971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028644:-1
position: 1028644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028514-1028644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1027524-1027969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026860-1027120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026494-1026738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1026207-1026380:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025593-1025797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1024954-1025252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1024576-1024737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1024021-1024061:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1023192-1023346:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1022754-1022866:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1022349-1022643:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1021842-1022005:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1021244-1021385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1018971-1019149:-1:exon

LOC111964839
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1032058..1036964
location: region:1032058-1036964:1
so has part: feature:1032058-1036964:1:exon
subclass of: SO_0000010

111964839
type: Gene
SIO_000068: ncbigene

position:1032058:1
position: 1032058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036964:1
position: 1036964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032058-1036964:1:exon

LOC111964839
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964839
product: cytochrome c oxidase subunit 6B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023988666.1
SIO_010081: LOC111964839
subclass of: SO_0000673
so part of: LOC111964839
location: join(1032058..1032149,1034865..1035002,1035987..1036087,1036752..1036964)
location: region:1032058-1036964:1
so has part: feature:1032058-1032149:1:exon
so has part: feature:1034865-1035002:1:exon
so has part: feature:1035987-1036087:1:exon
so has part: feature:1036752-1036964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032058-1032149:1:exon

position:1032149:1
position: 1032149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1034865-1035002:1:exon

position:1034865:1
position: 1034865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035002:1
position: 1035002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1035987-1036087:1:exon

position:1035987:1
position: 1035987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036087:1
position: 1036087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1036752-1036964:1:exon

position:1036752:1
position: 1036752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964839
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 6B1-like
translation: MSDVIEEKIKNYRTAPFDARFPNTNQTRNCFQNYLDFHRCNKALSXKGQDVAPCDWYQRVYKSICPMSWVAKWDDQIEAGSFPGKI
SIO_010081: LOC111964839
subclass of: SO_0000673
so part of: LOC111964839
location: join(1034897..1035002,1035987..1036087,1036752..1036805)
location: region:1034897-1036805:1
so has part: feature:1034897-1035002:1:exon
so has part: feature:1035987-1036087:1:exon
so has part: feature:1036752-1036805:1:exon

XP_023844434.1
type: Protein
SIO_000068: ncbiprotein

position:1034897:1
position: 1034897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036805:1
position: 1036805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034897-1035002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1035987-1036087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036752-1036805:1:exon

LOC111964841
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1053509..1055604)
location: region:1053509-1055604:-1
so has part: feature:1053509-1055604:-1:exon

111964841
type: Gene
SIO_000068: ncbigene

position:1053509:-1
position: 1053509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055604:-1
position: 1055604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053509-1055604:-1:exon

LOC111964841
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964841
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111964841
subclass of: SO_0000673
so part of: LOC111964841
location: complement(1053509..1053721)
location: region:1053509-1053721:-1
so has part: feature:1053509-1053721:-1:exon

position:1053721:-1
position: 1053721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053509-1053721:-1:exon

LOC111964841
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964841
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111964841
subclass of: SO_0000673
so part of: LOC111964841
location: complement(1054387..1054487)
location: region:1054387-1054487:-1
so has part: feature:1054387-1054487:-1:exon

position:1054387:-1
position: 1054387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054487:-1
position: 1054487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054387-1054487:-1:exon

LOC111964841
type: Exon
subclass of: SO_0000147
RO_0002162: 8036
gene: LOC111964841
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC111964841
subclass of: SO_0000673
so part of: LOC111964841
location: complement(1055485..1055604)
location: region:1055485-1055604:-1
so has part: feature:1055485-1055604:-1:exon

position:1055485:-1
position: 1055485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055485-1055604:-1:exon

LOC111964842
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1066106..1069750
location: region:1066106-1069750:1
so has part: feature:1066106-1069750:1:exon
subclass of: SO_0000010

111964842
type: Gene
SIO_000068: ncbigene

position:1066106:1
position: 1066106
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1069750:1
position: 1069750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066106-1069750:1:exon

LOC111964842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964842
product: ras-interacting protein 1
inference: similar to RNA sequence (same species):INSD:GEKT01064672.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 2269 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_023988668.1
SIO_010081: LOC111964842
subclass of: SO_0000673
so part of: LOC111964842
location: join(<1066106..1066260,1066586..1066698,1066809..1067103,1067447..1067610,1068067..1068208,1068883..1069750)
location: region:1066106-1069750:1
so has part: feature:1066106-1066260:1:exon
so has part: feature:1066586-1066698:1:exon
so has part: feature:1066809-1067103:1:exon
so has part: feature:1067447-1067610:1:exon
so has part: feature:1068067-1068208:1:exon
so has part: feature:1068883-1069750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1066106-1066260:1:exon

position:1066260:1
position: 1066260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066586-1066698:1:exon

position:1066586:1
position: 1066586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066698:1
position: 1066698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066809-1067103:1:exon

position:1066809:1
position: 1066809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067103:1
position: 1067103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1067447-1067610:1:exon

position:1067447:1
position: 1067447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067610:1
position: 1067610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1068067-1068208:1:exon

position:1068067:1
position: 1068067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068208:1
position: 1068208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1068883-1069750:1:exon

position:1068883:1
position: 1068883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964842
inference: similar to RNA sequence (same species):INSD:GEKT01064672.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 1964 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 2
product: ras-interacting protein 1
translation: MDQMEGTDSPRFRKLHFPVGLWINSPRKHFAKLGGRWPSAVSVKSTTSSDAASLHEAPSAPSSSLSISTPSLAPPSPSPSPAFLRPRPAGPQSRTKRLSHLFLRGRSNSDRDKAIGEKEREVWAHSAAPSSHHYLPPASSTAPGLIKIYGDALSSGANYRSLLATSHSTAKQLIAQVITRYTEREREETDDAALQKHSPEDFLLCDVIGKPIQQPDGAVQWETECRRGVAEWECPLLLVDMWRPKDGFERRFEIQRRDDYEKEEREKEKEREREGENHTGVRWRRSRIQSGGGAEEGERGHRGRNPELRRSISDMNLSLRRRQGNHVGNDPRRSGNHPNNSAGLQDRKNIVSMIAPLEHGEMMRSKVRDEVERRNKADKAVEEEKDYSACDLEVMSQSLILPPTDRPYFLLLQGYDQSKDFVLYIMAGHTHVFGRKPTMREREKDRERERKGKRPLKVETFLSAPDMLARHLLVRRDSAVPDAPSGQALMRPFRGGAVTHNGEALYREAVLKPGDVIGIGGHFLFLYRDPRVTPAPPLVLVLPWQADVPSTCCLSGLVDRQEALRQYLGSTEALLRFQPRHTDALLQEIISKNSSPDSEGGPLAPAFLLSIMIDHASKHLDPVLTPKLLLKAANQIKGIVWDNIKEFGDKHPTQNSTEQEVELSAPSAQKLSSDLRPLMFWMSNATELLNFFQVKAEAMERDWEFEAPGDPVLSADLDTCSEALAQLDDVIMHTFQQCVYHLTKTLYSLLPALLDNNPFSSLEKEKERDEAREMDGGEGGGGEGEGDDVSSLPPTVAGLVEVYRCSLMLSREACLSPPLTSQTFGYLFFFTNTSLLNTLLERDGLFSWSRAVQIRTNLDLVLDWLQGAGLGDIASEFLKKLSVTVNFLCVPKTRLIQSSWASLQEDHALLSPTQLYHLLTHYKLGPARAPPASWAPPPGTELSGDIFESFLDHPPLILPNETPQLDLSQPIPSPELQKEVTRLRNFLWGLDQDELPANQRTRL
SIO_010081: LOC111964842
subclass of: SO_0000673
so part of: LOC111964842
location: join(<1066106..1066260,1066586..1066698,1066809..1067103,1067447..1067610,1068067..1068208,1068883..1069061)
location: region:1066106-1069061:1
so has part: feature:1066106-1066260:1:exon
so has part: feature:1066586-1066698:1:exon
so has part: feature:1066809-1067103:1:exon
so has part: feature:1067447-1067610:1:exon
so has part: feature:1068067-1068208:1:exon
so has part: feature:1068883-1069061:1:exon

XP_023844436.1
type: Protein
SIO_000068: ncbiprotein

position:1069061:1
position: 1069061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066106-1066260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066586-1066698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066809-1067103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067447-1067610:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068067-1068208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1068883-1069061:1:exon

LOC111965438
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111965438
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1079221..1079273
location: region:1079221-1079273:1
so has part: feature:1079221-1079273:1:exon
subclass of: SO_0000623

111965438
type: Gene
SIO_000068: ncbigene

position:1079221:1
position: 1079221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079273:1
position: 1079273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079221-1079273:1:exon

LOC111965438
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: snRNA
gene: LOC111965438
product: U7 small nuclear RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00066
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002877528.1
SIO_010081: LOC111965438
subclass of: SO_0000673
so part of: LOC111965438
location: 1079221..1079273
location: region:1079221-1079273:1
so has part: feature:1079221-1079273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1079221-1079273:1:exon

LOC111964844
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1087104..1094517
location: region:1087104-1094517:1
so has part: feature:1087104-1094517:1:exon
subclass of: SO_0000010

111964844
type: Gene
SIO_000068: ncbigene

position:1087104:1
position: 1087104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094517:1
position: 1094517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087104-1094517:1:exon

LOC111964844
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964844
product: cation-dependent mannose-6-phosphate receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023988670.1
SIO_010081: LOC111964844
subclass of: SO_0000673
so part of: LOC111964844
location: join(1087104..1087125,1089150..1089328,1089692..1089858,1090033..1090142,1090342..1090472,1090769..1090895,1092123..1094517)
location: region:1087104-1094517:1
so has part: feature:1087104-1087125:1:exon
so has part: feature:1089150-1089328:1:exon
so has part: feature:1089692-1089858:1:exon
so has part: feature:1090033-1090142:1:exon
so has part: feature:1090342-1090472:1:exon
so has part: feature:1090769-1090895:1:exon
so has part: feature:1092123-1094517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1087104-1087125:1:exon

position:1087125:1
position: 1087125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1089150-1089328:1:exon

position:1089150:1
position: 1089150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089328:1
position: 1089328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1089692-1089858:1:exon

position:1089692:1
position: 1089692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089858:1
position: 1089858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1090033-1090142:1:exon

position:1090033:1
position: 1090033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090142:1
position: 1090142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1090342-1090472:1:exon

position:1090342:1
position: 1090342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090472:1
position: 1090472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1090769-1090895:1:exon

position:1090769:1
position: 1090769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090895:1
position: 1090895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1092123-1094517:1:exon

position:1092123:1
position: 1092123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964844
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964844
product: cation-dependent mannose-6-phosphate receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_023988669.1
SIO_010081: LOC111964844
subclass of: SO_0000673
so part of: LOC111964844
location: join(1087402..1087779,1089150..1089328,1089692..1089858,1090033..1090142,1090342..1090472,1090769..1090895,1092123..1094517)
location: region:1087402-1094517:1
so has part: feature:1087402-1087779:1:exon
so has part: feature:1089150-1089328:1:exon
so has part: feature:1089692-1089858:1:exon
so has part: feature:1090033-1090142:1:exon
so has part: feature:1090342-1090472:1:exon
so has part: feature:1090769-1090895:1:exon
so has part: feature:1092123-1094517:1:exon

position:1087402:1
position: 1087402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087402-1087779:1:exon

position:1087779:1
position: 1087779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1089150-1089328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1089692-1089858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090033-1090142:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090342-1090472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1090769-1090895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1092123-1094517:1:exon

LOC111964844
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cation-dependent mannose-6-phosphate receptor isoform X1
translation: MKVSMSPPHTATSVRLLVLAVQLVLLVCGGQASDDTKRCKLFSKSPAERKVLSLLEPLTNKTFSVETTSNMENYTYQFQVCGDVGKTVGAGLVQIDHTEKKLETVLGLYTATQAIGGSDWVMLIYSNGTKYDTHCSKEMRKAIVMISCNRGVEMGKLEVVLEERERNTDCFYLFELDSSAVCPALPSQLSAGSIILIIGFVLLSVYLICGFLYQRLIVGAKGLQQFPNYVFWTQVGNLAADGCNVVCRTQGPEEEPPTYRGVSTEPEEEPEERDDHLLPM
SIO_010081: LOC111964844
subclass of: SO_0000673
so part of: LOC111964844
location: join(1087774..1087779,1089150..1089328,1089692..1089858,1090033..1090142,1090342..1090472,1090769..1090895,1092123..1092245)
location: region:1087774-1092245:1
so has part: feature:1087774-1087779:1:exon
so has part: feature:1089150-1089328:1:exon
so has part: feature:1089692-1089858:1:exon
so has part: feature:1090033-1090142:1:exon
so has part: feature:1090342-1090472:1:exon
so has part: feature:1090769-1090895:1:exon
so has part: feature:1092123-1092245:1:exon

XP_023844437.1
type: Protein
SIO_000068: ncbiprotein

position:1087774:1
position: 1087774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092245:1
position: 1092245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087774-1087779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1089150-1089328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1089692-1089858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090033-1090142:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090342-1090472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1090769-1090895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1092123-1092245:1:exon

LOC111964844
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cation-dependent mannose-6-phosphate receptor isoform X2
translation: MSPPHTATSVRLLVLAVQLVLLVCGGQASDDTKRCKLFSKSPAERKVLSLLEPLTNKTFSVETTSNMENYTYQFQVCGDVGKTVGAGLVQIDHTEKKLETVLGLYTATQAIGGSDWVMLIYSNGTKYDTHCSKEMRKAIVMISCNRGVEMGKLEVVLEERERNTDCFYLFELDSSAVCPALPSQLSAGSIILIIGFVLLSVYLICGFLYQRLIVGAKGLQQFPNYVFWTQVGNLAADGCNVVCRTQGPEEEPPTYRGVSTEPEEEPEERDDHLLPM
SIO_010081: LOC111964844
subclass of: SO_0000673
so part of: LOC111964844
location: join(1089156..1089328,1089692..1089858,1090033..1090142,1090342..1090472,1090769..1090895,1092123..1092245)
location: region:1089156-1092245:1
so has part: feature:1089156-1089328:1:exon
so has part: feature:1089692-1089858:1:exon
so has part: feature:1090033-1090142:1:exon
so has part: feature:1090342-1090472:1:exon
so has part: feature:1090769-1090895:1:exon
so has part: feature:1092123-1092245:1:exon

XP_023844438.1
type: Protein
SIO_000068: ncbiprotein

position:1089156:1
position: 1089156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089156-1089328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1089692-1089858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090033-1090142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090342-1090472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090769-1090895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1092123-1092245:1:exon

LOC111964590
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1102625..1111314
location: region:1102625-1111314:1
so has part: feature:1102625-1111314:1:exon
subclass of: SO_0000010

111964590
type: Gene
SIO_000068: ncbigene

position:1102625:1
position: 1102625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111314:1
position: 1111314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102625-1111314:1:exon

LOC111964590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964590
product: polyhomeotic-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988436.1
SIO_010081: LOC111964590
subclass of: SO_0000673
so part of: LOC111964590
location: join(1102625..1102801,1103423..1103544,1104128..1104241,1105980..1106045,1106170..1106313,1106399..1106563,1106696..1106777,1106915..1107216,1107263..1107446,1107651..1107829,1107971..1108037,1108677..1108764,1108927..1109098,1110266..1110512,1110924..1111314)
location: region:1102625-1111314:1
so has part: feature:1102625-1102801:1:exon
so has part: feature:1103423-1103544:1:exon
so has part: feature:1104128-1104241:1:exon
so has part: feature:1105980-1106045:1:exon
so has part: feature:1106170-1106313:1:exon
so has part: feature:1106399-1106563:1:exon
so has part: feature:1106696-1106777:1:exon
so has part: feature:1106915-1107216:1:exon
so has part: feature:1107263-1107446:1:exon
so has part: feature:1107651-1107829:1:exon
so has part: feature:1107971-1108037:1:exon
so has part: feature:1108677-1108764:1:exon
so has part: feature:1108927-1109098:1:exon
so has part: feature:1110266-1110512:1:exon
so has part: feature:1110924-1111314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102625-1102801:1:exon

position:1102801:1
position: 1102801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1103423-1103544:1:exon

position:1103423:1
position: 1103423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103544:1
position: 1103544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1104128-1104241:1:exon

position:1104128:1
position: 1104128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104241:1
position: 1104241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1105980-1106045:1:exon

position:1105980:1
position: 1105980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106045:1
position: 1106045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1106170-1106313:1:exon

position:1106170:1
position: 1106170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106313:1
position: 1106313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1106399-1106563:1:exon

position:1106399:1
position: 1106399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106563:1
position: 1106563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1106696-1106777:1:exon

position:1106696:1
position: 1106696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106777:1
position: 1106777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1106915-1107216:1:exon

position:1106915:1
position: 1106915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107216:1
position: 1107216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1107263-1107446:1:exon

position:1107263:1
position: 1107263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107446:1
position: 1107446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1107651-1107829:1:exon

position:1107651:1
position: 1107651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107829:1
position: 1107829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1107971-1108037:1:exon

position:1107971:1
position: 1107971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108037:1
position: 1108037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1108677-1108764:1:exon

position:1108677:1
position: 1108677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108764:1
position: 1108764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1108927-1109098:1:exon

position:1108927:1
position: 1108927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109098:1
position: 1109098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1110266-1110512:1:exon

position:1110266:1
position: 1110266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110512:1
position: 1110512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1110924-1111314:1:exon

position:1110924:1
position: 1110924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyhomeotic-like protein 1
translation: MDTGDDQNTGSTNGNASSAGNTRPPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQQQINSAQQLHNLAAVQQATLAASRQSNSPNHSVSQATTTVNLSTASGGGTMTNTRPLGPATSVTSSALSQSVLLGGNSAGQGQMYLRVNRSLRAPLAASQLIFMPGGTATAAVATVAQQQPQQQQQQQEVHPASNAQSDNDQVQNLALHCISTPRVAAVKTEFPDRRDAANYSFSQQQQQHPQQQQQQFSQNTQQQIQPQQQQQQMANKLTSYTHPTALPSINVKTGNQLNMAPTAATSVPASSSPSLTLPLSQLLLSPSGLCQARAVTTVCVLIKTCLFLLHQAKPAIGSLKRKSETDATNEMAVELSQLCCPPMRDSAPPLSPAPTLDSAPKVVPAFSSPPTLSLPLPLSRGVGGQGDRAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPVKEPLAMGVQQADNGGPAVLKCEYCESLAPASQFRGSKRFCSKTCAKRYNVSCSHHFQVSRGRASARPPGPPVPPDSIVRRRGPRRSSSEIACAKIAGRHLPVKECRSESSRSEDVSSCDGEEEEEEEDSPSLSPSSSLSCPRPAHCDPHLDDSAQGSLPLDEANFLSGSPAHWGVEEVCRFISSLQGCEELAAQFLSQEIDGQALLLLREEHLISTMNIKLGPALKICAFINSLRD
SIO_010081: LOC111964590
subclass of: SO_0000673
so part of: LOC111964590
location: join(1103428..1103544,1104128..1104241,1105980..1106045,1106170..1106313,1106399..1106563,1106696..1106777,1106915..1107216,1107263..1107446,1107651..1107829,1107971..1108037,1108677..1108764,1108927..1109098,1110266..1110512,1110924..1111075)
location: region:1103428-1111075:1
so has part: feature:1103428-1103544:1:exon
so has part: feature:1104128-1104241:1:exon
so has part: feature:1105980-1106045:1:exon
so has part: feature:1106170-1106313:1:exon
so has part: feature:1106399-1106563:1:exon
so has part: feature:1106696-1106777:1:exon
so has part: feature:1106915-1107216:1:exon
so has part: feature:1107263-1107446:1:exon
so has part: feature:1107651-1107829:1:exon
so has part: feature:1107971-1108037:1:exon
so has part: feature:1108677-1108764:1:exon
so has part: feature:1108927-1109098:1:exon
so has part: feature:1110266-1110512:1:exon
so has part: feature:1110924-1111075:1:exon

XP_023844204.1
type: Protein
SIO_000068: ncbiprotein

position:1103428:1
position: 1103428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111075:1
position: 1111075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103428-1103544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104128-1104241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1105980-1106045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106170-1106313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106399-1106563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1106696-1106777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1106915-1107216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1107263-1107446:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1107651-1107829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1107971-1108037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1108677-1108764:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108927-1109098:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1110266-1110512:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1110924-1111075:1:exon

LOC111964591
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1115811..1123468)
location: region:1115811-1123468:-1
so has part: feature:1115811-1123468:-1:exon
subclass of: SO_0000010

111964591
type: Gene
SIO_000068: ncbigene

position:1115811:-1
position: 1115811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123468:-1
position: 1123468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115811-1123468:-1:exon

LOC111964591
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964591
product: tyrosine-protein kinase STYK1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023988437.1
SIO_010081: LOC111964591
subclass of: SO_0000673
so part of: LOC111964591
location: complement(join(1115811..1116392,1117520..1117616,1117790..1117830,1117922..1118163,1121578..1121759,1122331..1122702,1122994..1123179,1123255..1123468))
location: region:1115811-1123468:-1
so has part: feature:1123255-1123468:-1:exon
so has part: feature:1122994-1123179:-1:exon
so has part: feature:1122331-1122702:-1:exon
so has part: feature:1121578-1121759:-1:exon
so has part: feature:1117922-1118163:-1:exon
so has part: feature:1117790-1117830:-1:exon
so has part: feature:1117520-1117616:-1:exon
so has part: feature:1115811-1116392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1123255-1123468:-1:exon

position:1123255:-1
position: 1123255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1122994-1123179:-1:exon

position:1122994:-1
position: 1122994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123179:-1
position: 1123179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1122331-1122702:-1:exon

position:1122331:-1
position: 1122331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122702:-1
position: 1122702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1121578-1121759:-1:exon

position:1121578:-1
position: 1121578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121759:-1
position: 1121759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1117922-1118163:-1:exon

position:1117922:-1
position: 1117922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118163:-1
position: 1118163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1117790-1117830:-1:exon

position:1117790:-1
position: 1117790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117830:-1
position: 1117830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1117520-1117616:-1:exon

position:1117520:-1
position: 1117520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117616:-1
position: 1117616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1115811-1116392:-1:exon

position:1116392:-1
position: 1116392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964591
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase STYK1-like
translation: MSSMSEADSRCKPGDTICNIRVYEQEVIIVPILLLASFLVMLVFIILLRYCPEKVDRIRPQNTVATSRSQRSRRQLHGIDAPLGINPLEHETIALDTPSYSTFSPTHSHPSSNCLSFSVRTPSLPPIPPPKTFIPSSLSSPLPQALTPSFTPMVQPRELPRQRLPESFNLVASLPAAFSLRSDKAVSLYRARMDNRNAVLRVLNDSASATERHNFLGFASFLSQLGPHPFLPELLGVVSLRVPLVTVVEELENRDLLSFLWRCRQLTSRYPLSSNQEFLHSRDLLHGNVRAHSVLVSRELTAKLWGLGGVYTRNTQGATQTEVPGMKKWQAPELLARRPANHSSDVWSFGILLFEMATLGDAPFSDISVNELLQFHQRGKTLRKPANCSNSLYSIIKACCQWKEQDRATLAEVDRKLQSGEKSANDKVLKVPEPINIEQYLQEAGYGESNSYTVF
SIO_010081: LOC111964591
subclass of: SO_0000673
so part of: LOC111964591
location: complement(join(1116200..1116392,1117520..1117616,1117790..1117830,1117922..1118163,1121578..1121759,1122331..1122702,1122994..1123179,1123255..1123309))
location: region:1116200-1123309:-1
so has part: feature:1123255-1123309:-1:exon
so has part: feature:1122994-1123179:-1:exon
so has part: feature:1122331-1122702:-1:exon
so has part: feature:1121578-1121759:-1:exon
so has part: feature:1117922-1118163:-1:exon
so has part: feature:1117790-1117830:-1:exon
so has part: feature:1117520-1117616:-1:exon
so has part: feature:1116200-1116392:-1:exon

XP_023844205.1
type: Protein
SIO_000068: ncbiprotein

position:1116200:-1
position: 1116200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123309:-1
position: 1123309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1123255-1123309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122994-1123179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1122331-1122702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1121578-1121759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1117922-1118163:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117790-1117830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1117520-1117616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116200-1116392:-1:exon

LOC111964592
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1125152..1127005)
location: region:1125152-1127005:-1
so has part: feature:1125152-1127005:-1:exon
subclass of: SO_0000010

111964592
type: Gene
SIO_000068: ncbigene

position:1125152:-1
position: 1125152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127005:-1
position: 1127005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125152-1127005:-1:exon

LOC111964592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964592
product: tyrosine-protein kinase STYK1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_023988438.1
SIO_010081: LOC111964592
subclass of: SO_0000673
so part of: LOC111964592
location: complement(join(1125152..1125363,1125935..1126306,1126598..1126783,1126859..1127005))
location: region:1125152-1127005:-1
so has part: feature:1126859-1127005:-1:exon
so has part: feature:1126598-1126783:-1:exon
so has part: feature:1125935-1126306:-1:exon
so has part: feature:1125152-1125363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1126859-1127005:-1:exon

position:1126859:-1
position: 1126859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1126598-1126783:-1:exon

position:1126598:-1
position: 1126598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126783:-1
position: 1126783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1125935-1126306:-1:exon

position:1125935:-1
position: 1125935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126306:-1
position: 1126306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1125152-1125363:-1:exon

position:1125363:-1
position: 1125363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase STYK1-like
translation: MSSMSEADSRCKPGDTICNIRVYEQEVIIVPILLLASFLVMLVFIILLRYCPEKVDRIRPQNTVATSRSQRSRRQLHGIDAPLGINPLEHETIALDTPSYSTFSPTHSHPSSNCLSFSVRTPSLPPIPPPKTFIPSSLSSPLPQALTPSFTPMVQPRELPRQRLPESFNLVASLPAAFSLRSDKAVSLYRARMDNRNAVLRVLNDSASATERHNFLGFASFLSQLGPHPFLPELLGVVSLRVPLVTVVEELENRDLLSFLWRCRQVGTTLPMXS
SIO_010081: LOC111964592
subclass of: SO_0000673
so part of: LOC111964592
location: complement(join(1125152..1125363,1125935..1126306,1126598..1126783,1126859..1126913))
location: region:1125152-1126913:-1
so has part: feature:1126859-1126913:-1:exon
so has part: feature:1126598-1126783:-1:exon
so has part: feature:1125935-1126306:-1:exon
so has part: feature:1125152-1125363:-1:exon

XP_023844206.1
type: Protein
SIO_000068: ncbiprotein

position:1126913:-1
position: 1126913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1126859-1126913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1126598-1126783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1125935-1126306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1125152-1125363:-1:exon

gstk1
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: gstk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1130679..1134432)
location: region:1130679-1134432:-1
so has part: feature:1130679-1134432:-1:exon
subclass of: SO_0000010

111964845
type: Gene
SIO_000068: ncbigene

position:1130679:-1
position: 1130679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134432:-1
position: 1134432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130679-1134432:-1:exon

gstk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: gstk1
product: glutathione S-transferase kappa 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_023988677.1
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130679..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133562,1134362..1134432))
location: region:1130679-1134432:-1
so has part: feature:1134362-1134432:-1:exon
so has part: feature:1133467-1133562:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130679-1130808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1134362-1134432:-1:exon

position:1134362:-1
position: 1134362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1133467-1133562:-1:exon

position:1133467:-1
position: 1133467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133562:-1
position: 1133562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133295-1133376:-1:exon

position:1133295:-1
position: 1133295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133376:-1
position: 1133376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1133000-1133128:-1:exon

position:1133000:-1
position: 1133000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133128:-1
position: 1133128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1132375-1132520:-1:exon

position:1132375:-1
position: 1132375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132520:-1
position: 1132520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1131961-1132077:-1:exon

position:1131961:-1
position: 1131961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132077:-1
position: 1132077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1131693-1131786:-1:exon

position:1131693:-1
position: 1131693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131786:-1
position: 1131786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1130679-1130808:-1:exon

position:1130808:-1
position: 1130808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gstk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: gstk1
product: glutathione S-transferase kappa 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_023988675.1
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130679..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133562,1133954..1133978,1134362..1134377))
location: region:1130679-1134377:-1
so has part: feature:1134362-1134377:-1:exon
so has part: feature:1133954-1133978:-1:exon
so has part: feature:1133467-1133562:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130679-1130808:-1:exon

position:1134377:-1
position: 1134377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134362-1134377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133954-1133978:-1:exon

position:1133954:-1
position: 1133954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133978:-1
position: 1133978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133467-1133562:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130679-1130808:-1:exon

gstk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: gstk1
product: glutathione S-transferase kappa 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_023988678.1
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130679..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133562,1134160..1134222))
location: region:1130679-1134222:-1
so has part: feature:1134160-1134222:-1:exon
so has part: feature:1133467-1133562:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130679-1130808:-1:exon

position:1134222:-1
position: 1134222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134160-1134222:-1:exon

position:1134160:-1
position: 1134160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1133467-1133562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130679-1130808:-1:exon

gstk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: gstk1
product: glutathione S-transferase kappa 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_023988674.1
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130679..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133562,1133954..1133978,1134160..1134178))
location: region:1130679-1134178:-1
so has part: feature:1134160-1134178:-1:exon
so has part: feature:1133954-1133978:-1:exon
so has part: feature:1133467-1133562:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130679-1130808:-1:exon

position:1134178:-1
position: 1134178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134160-1134178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133954-1133978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133467-1133562:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130679-1130808:-1:exon

gstk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: gstk1
product: glutathione S-transferase kappa 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_023988676.1
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130679..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133538,1133954..1134127))
location: region:1130679-1134127:-1
so has part: feature:1133954-1134127:-1:exon
so has part: feature:1133467-1133538:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130679-1130808:-1:exon

position:1134127:-1
position: 1134127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133954-1134127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133467-1133538:-1:exon

position:1133538:-1
position: 1133538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130679-1130808:-1:exon

gstk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: gstk1
product: glutathione S-transferase kappa 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_023988671.1
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130679..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133562,1133954..1134127))
location: region:1130679-1134127:-1
so has part: feature:1133954-1134127:-1:exon
so has part: feature:1133467-1133562:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130679-1130808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1133954-1134127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133467-1133562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130679-1130808:-1:exon

gstk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: gstk1
product: glutathione S-transferase kappa 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_023988673.1
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130679..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133562,1133954..1133978,1134090..1134108))
location: region:1130679-1134108:-1
so has part: feature:1134090-1134108:-1:exon
so has part: feature:1133954-1133978:-1:exon
so has part: feature:1133467-1133562:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130679-1130808:-1:exon

position:1134108:-1
position: 1134108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134090-1134108:-1:exon

position:1134090:-1
position: 1134090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1133954-1133978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133467-1133562:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130679-1130808:-1:exon

gstk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: gstk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase kappa 1
translation: MASSRKVIELFYDVVSPYSWLGFEVMCRYRNVWNIDLKLRPAFLGGIMQGSGNKPPGLVPNKFLYMTTDLHRLAQYFQVPISPPADPFEAMFEKGSLSAMRFVAAVQEREVGGDKQVEQVSRELWMRIWSQDKDITQPASLSEAAMKAGLSASEVEELLKLSTSKEIKDKLKRSTQEALDHRAFGFPLAVCHVNGKAEVFFGSDRFELIAHCIGEKWMGPQPAAAKL
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130765..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133538))
location: region:1130765-1133538:-1
so has part: feature:1133467-1133538:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130765-1130808:-1:exon

XP_023844439.1
type: Protein
SIO_000068: ncbiprotein

position:1130765:-1
position: 1130765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133467-1133538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130765-1130808:-1:exon

gstk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: gstk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase kappa 1
translation: MASSRKVIELFYDVVSPYSWLGFEVMCRYRNVWNIDLKLRPAFLGGIMQGSGNKPPGLVPNKFLYMTTDLHRLAQYFQVPISPPADPFEAMFEKGSLSAMRFVAAVQEREVGGDKQVEQVSRELWMRIWSQDKDITQPASLSEAAMKAGLSASEVEELLKLSTSKEIKDKLKRSTQEALDHRAFGFPLAVCHVNGKAEVFFGSDRFELIAHCIGEKWMGPQPAAAKL
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130765..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133538))
location: region:1130765-1133538:-1
so has part: feature:1133467-1133538:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130765-1130808:-1:exon

XP_023844441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1133467-1133538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130765-1130808:-1:exon

gstk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: gstk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase kappa 1
translation: MASSRKVIELFYDVVSPYSWLGFEVMCRYRNVWNIDLKLRPAFLGGIMQGSGNKPPGLVPNKFLYMTTDLHRLAQYFQVPISPPADPFEAMFEKGSLSAMRFVAAVQEREVGGDKQVEQVSRELWMRIWSQDKDITQPASLSEAAMKAGLSASEVEELLKLSTSKEIKDKLKRSTQEALDHRAFGFPLAVCHVNGKAEVFFGSDRFELIAHCIGEKWMGPQPAAAKL
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130765..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133538))
location: region:1130765-1133538:-1
so has part: feature:1133467-1133538:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130765-1130808:-1:exon

XP_023844442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1133467-1133538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130765-1130808:-1:exon

gstk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: gstk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase kappa 1
translation: MASSRKVIELFYDVVSPYSWLGFEVMCRYRNVWNIDLKLRPAFLGGIMQGSGNKPPGLVPNKFLYMTTDLHRLAQYFQVPISPPADPFEAMFEKGSLSAMRFVAAVQEREVGGDKQVEQVSRELWMRIWSQDKDITQPASLSEAAMKAGLSASEVEELLKLSTSKEIKDKLKRSTQEALDHRAFGFPLAVCHVNGKAEVFFGSDRFELIAHCIGEKWMGPQPAAAKL
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130765..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133538))
location: region:1130765-1133538:-1
so has part: feature:1133467-1133538:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130765-1130808:-1:exon

XP_023844443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1133467-1133538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130765-1130808:-1:exon

gstk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: gstk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase kappa 1
translation: MASSRKVIELFYDVVSPYSWLGFEVMCRYRNVWNIDLKLRPAFLGGIMQGSGNKPPGLVPNKFLYMTTDLHRLAQYFQVPISPPADPFEAMFEKGSLSAMRFVAAVQEREVGGDKQVEQVSRELWMRIWSQDKDITQPASLSEAAMKAGLSASEVEELLKLSTSKEIKDKLKRSTQEALDHRAFGFPLAVCHVNGKAEVFFGSDRFELIAHCIGEKWMGPQPAAAKL
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130765..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133538))
location: region:1130765-1133538:-1
so has part: feature:1133467-1133538:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130765-1130808:-1:exon

XP_023844444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1133467-1133538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130765-1130808:-1:exon

gstk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: gstk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase kappa 1
translation: MASSRKVIELFYDVVSPYSWLGFEVMCRYRNVWNIDLKLRPAFLGGIMQGSGNKPPGLVPNKFLYMTTDLHRLAQYFQVPISPPADPFEAMFEKGSLSAMRFVAAVQEREVGGDKQVEQVSRELWMRIWSQDKDITQPASLSEAAMKAGLSASEVEELLKLSTSKEIKDKLKRSTQEALDHRAFGFPLAVCHVNGKAEVFFGSDRFELIAHCIGEKWMGPQPAAAKL
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130765..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133538))
location: region:1130765-1133538:-1
so has part: feature:1133467-1133538:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130765-1130808:-1:exon

XP_023844445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1133467-1133538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130765-1130808:-1:exon

gstk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: gstk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase kappa 1
translation: MASSRKVIELFYDVVSPYSWLGFEVMCRYRNVWNIDLKLRPAFLGGIMQGSGNKPPGLVPNKFLYMTTDLHRLAQYFQVPISPPADPFEAMFEKGSLSAMRFVAAVQEREVGGDKQVEQVSRELWMRIWSQDKDITQPASLSEAAMKAGLSASEVEELLKLSTSKEIKDKLKRSTQEALDHRAFGFPLAVCHVNGKAEVFFGSDRFELIAHCIGEKWMGPQPAAAKL
SIO_010081: gstk1
subclass of: SO_0000673
so part of: gstk1
location: complement(join(1130765..1130808,1131693..1131786,1131961..1132077,1132375..1132520,1133000..1133128,1133295..1133376,1133467..1133538))
location: region:1130765-1133538:-1
so has part: feature:1133467-1133538:-1:exon
so has part: feature:1133295-1133376:-1:exon
so has part: feature:1133000-1133128:-1:exon
so has part: feature:1132375-1132520:-1:exon
so has part: feature:1131961-1132077:-1:exon
so has part: feature:1131693-1131786:-1:exon
so has part: feature:1130765-1130808:-1:exon

XP_023844446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1133467-1133538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133295-1133376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133000-1133128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132375-1132520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1131961-1132077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131693-1131786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130765-1130808:-1:exon

LOC111964846
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1140040..1141721)
location: region:1140040-1141721:-1
so has part: feature:1140040-1141721:-1:exon
subclass of: SO_0000011

111964846
type: Gene
SIO_000068: ncbigene

position:1140040:-1
position: 1140040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141721:-1
position: 1141721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140040-1141721:-1:exon

LOC111964846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964846
product: uncharacterized LOC111964846, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XR_002877446.1
SIO_010081: LOC111964846
subclass of: SO_0000673
so part of: LOC111964846
location: complement(join(1140040..1140097,1140264..1140345,1140617..1140688,1141205..1141229,1141350..1141721))
location: region:1140040-1141721:-1
so has part: feature:1141350-1141721:-1:exon
so has part: feature:1141205-1141229:-1:exon
so has part: feature:1140617-1140688:-1:exon
so has part: feature:1140264-1140345:-1:exon
so has part: feature:1140040-1140097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1141350-1141721:-1:exon

position:1141350:-1
position: 1141350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1141205-1141229:-1:exon

position:1141205:-1
position: 1141205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141229:-1
position: 1141229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1140617-1140688:-1:exon

position:1140617:-1
position: 1140617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140688:-1
position: 1140688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1140264-1140345:-1:exon

position:1140264:-1
position: 1140264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140345:-1
position: 1140345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1140040-1140097:-1:exon

position:1140097:-1
position: 1140097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC111964846
product: uncharacterized LOC111964846, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XR_002877445.1
SIO_010081: LOC111964846
subclass of: SO_0000673
so part of: LOC111964846
location: complement(join(1140040..1140097,1140264..1140345,1140617..1140688,1141205..1141330))
location: region:1140040-1141330:-1
so has part: feature:1141205-1141330:-1:exon
so has part: feature:1140617-1140688:-1:exon
so has part: feature:1140264-1140345:-1:exon
so has part: feature:1140040-1140097:-1:exon

position:1141330:-1
position: 1141330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141205-1141330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140617-1140688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140264-1140345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1140040-1140097:-1:exon

LOC111964593
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1157635..1159908)
location: region:1157635-1159908:-1
so has part: feature:1157635-1159908:-1:exon
subclass of: SO_0000010

111964593
type: Gene
SIO_000068: ncbigene

position:1157635:-1
position: 1157635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159908:-1
position: 1159908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1157635-1159908:-1:exon

LOC111964593
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964593
product: rap1 GTPase-activating protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_024147111.1
SIO_010081: LOC111964593
subclass of: SO_0000673
so part of: LOC111964593
location: complement(join(1157635..1157842,1157918..1157943,1158053..1158139,1158229..1158384,1159527..1159613,1159882..1159908))
location: region:1157635-1159908:-1
so has part: feature:1159882-1159908:-1:exon
so has part: feature:1159527-1159613:-1:exon
so has part: feature:1158229-1158384:-1:exon
so has part: feature:1158053-1158139:-1:exon
so has part: feature:1157918-1157943:-1:exon
so has part: feature:1157635-1157842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159882-1159908:-1:exon

position:1159882:-1
position: 1159882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1159527-1159613:-1:exon

position:1159527:-1
position: 1159527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159613:-1
position: 1159613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1158229-1158384:-1:exon

position:1158229:-1
position: 1158229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158384:-1
position: 1158384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1158053-1158139:-1:exon

position:1158053:-1
position: 1158053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158139:-1
position: 1158139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1157918-1157943:-1:exon

position:1157918:-1
position: 1157918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157943:-1
position: 1157943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1157635-1157842:-1:exon

position:1157842:-1
position: 1157842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111964593
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap1 GTPase-activating protein 2-like
translation: MRGRRQEEESSLLREFLLTKLINAEISCYKAERFSKLELRTRSSLLEGLQAELSTRSQCMIGDSPVSALSTSEGMRGVTEGSGGFIENFKRAIRVRSNSFDTLGGPRKMGGVPLPQKPKAATERDGESELAYKPPEPSFPPTDNLGSTEVKDHSSPQENT
SIO_010081: LOC111964593
subclass of: SO_0000673
so part of: LOC111964593
location: complement(join(1157743..1157842,1157918..1157943,1158053..1158139,1158229..1158384,1159527..1159613,1159882..1159908))
location: region:1157743-1159908:-1
so has part: feature:1159882-1159908:-1:exon
so has part: feature:1159527-1159613:-1:exon
so has part: feature:1158229-1158384:-1:exon
so has part: feature:1158053-1158139:-1:exon
so has part: feature:1157918-1157943:-1:exon
so has part: feature:1157743-1157842:-1:exon

XP_024002879.1
type: Protein
SIO_000068: ncbiprotein

position:1157743:-1
position: 1157743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159882-1159908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1159527-1159613:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1158229-1158384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1158053-1158139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1157918-1157943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157743-1157842:-1:exon

LOC112081102
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112081102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1160641..1161138)
location: region:1160641-1161138:-1
so has part: feature:1160641-1161138:-1:exon
subclass of: SO_0000011

112081102
type: Gene
SIO_000068: ncbigene

position:1160641:-1
position: 1160641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161138:-1
position: 1161138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1160641-1161138:-1:exon

LOC112081102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8036
nc RNA class: lncRNA
gene: LOC112081102
product: uncharacterized LOC112081102
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_002896316.1
SIO_010081: LOC112081102
subclass of: SO_0000673
so part of: LOC112081102
location: complement(join(1160641..1160726,1160930..1160983,1161099..1161138))
location: region:1160641-1161138:-1
so has part: feature:1161099-1161138:-1:exon
so has part: feature:1160930-1160983:-1:exon
so has part: feature:1160641-1160726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1161099-1161138:-1:exon

position:1161099:-1
position: 1161099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160930-1160983:-1:exon

position:1160930:-1
position: 1160930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160983:-1
position: 1160983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1160641-1160726:-1:exon

position:1160726:-1
position: 1160726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

casp2
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: casp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1173465..1184072
location: region:1173465-1184072:1
so has part: feature:1173465-1184072:1:exon
subclass of: SO_0000010

111964847
type: Gene
SIO_000068: ncbigene

position:1173465:1
position: 1173465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184072:1
position: 1184072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173465-1184072:1:exon

casp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: casp2
product: caspase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_023988679.1
SIO_010081: casp2
subclass of: SO_0000673
so part of: casp2
location: join(1173465..1173517,1174244..1174397,1174919..1175080,1175242..1175382,1179741..1179813,1180350..1180441,1181860..1182042,1182446..1182574,1182656..1182746,1182851..1183034,1183623..1183732,1183842..1184072)
location: region:1173465-1184072:1
so has part: feature:1173465-1173517:1:exon
so has part: feature:1174244-1174397:1:exon
so has part: feature:1174919-1175080:1:exon
so has part: feature:1175242-1175382:1:exon
so has part: feature:1179741-1179813:1:exon
so has part: feature:1180350-1180441:1:exon
so has part: feature:1181860-1182042:1:exon
so has part: feature:1182446-1182574:1:exon
so has part: feature:1182656-1182746:1:exon
so has part: feature:1182851-1183034:1:exon
so has part: feature:1183623-1183732:1:exon
so has part: feature:1183842-1184072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173465-1173517:1:exon

position:1173517:1
position: 1173517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1174244-1174397:1:exon

position:1174244:1
position: 1174244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174397:1
position: 1174397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1174919-1175080:1:exon

position:1174919:1
position: 1174919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175080:1
position: 1175080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175242-1175382:1:exon

position:1175242:1
position: 1175242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175382:1
position: 1175382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1179741-1179813:1:exon

position:1179741:1
position: 1179741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179813:1
position: 1179813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1180350-1180441:1:exon

position:1180350:1
position: 1180350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180441:1
position: 1180441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1181860-1182042:1:exon

position:1181860:1
position: 1181860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182042:1
position: 1182042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1182446-1182574:1:exon

position:1182446:1
position: 1182446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182574:1
position: 1182574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1182656-1182746:1:exon

position:1182656:1
position: 1182656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182746:1
position: 1182746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1182851-1183034:1:exon

position:1182851:1
position: 1182851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183034:1
position: 1183034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1183623-1183732:1:exon

position:1183623:1
position: 1183623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183732:1
position: 1183732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1183842-1184072:1:exon

position:1183842:1
position: 1183842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

casp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: casp2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: caspase-2
translation: MLGECGMLERDKRGLRKYAVTLCKEMVVDELFIQSLQTDDILTDSMAEGILAEPTSHKRSWRLLSLLPKRGPRAFSSFCSALRDTEQQHLCALLTESPERDGERQCPQTARAKDRAEGVSSTKYPIQASDRYAPFTKTPVKDSEEEGDEEKERYVDSPLPLPTQEGMVPAKRXRTQESMEMCLDADSPITSPVLPCTPDFYLKHCQQSYSMVSSPRGLALVISNVSFDPCAAPDLDSRKGGEVDEEVLRKVFTELDYIVTVRRDLTAQGMRACIEQFGRRQQHQTVSSCVVCLLSHGVEGAIYGTDGQLLELDWVFEAFDNAHCPLLQNKPKMFFIQACRGEEMDCGVXQSDGPERXQSPGCEQRDAGREGEGDGDTRQTEERGRLRVKLPQRRHDLWLRSLKGTAAMRNTKRGSWFIQEVNSALRFRARDTHLSDILVQVNGRIKDREGYAPGTPHHRCKEMSEFTSSLCKDLYLFPKYHPQY
SIO_010081: casp2
subclass of: SO_0000673
so part of: casp2
location: join(1174245..1174397,1174919..1175080,1175242..1175382,1179741..1179813,1180350..1180441,1181860..1182042,1182446..1182574,1182656..1182746,1182851..1183034,1183623..1183732,1183842..1183976)
location: region:1174245-1183976:1
so has part: feature:1174245-1174397:1:exon
so has part: feature:1174919-1175080:1:exon
so has part: feature:1175242-1175382:1:exon
so has part: feature:1179741-1179813:1:exon
so has part: feature:1180350-1180441:1:exon
so has part: feature:1181860-1182042:1:exon
so has part: feature:1182446-1182574:1:exon
so has part: feature:1182656-1182746:1:exon
so has part: feature:1182851-1183034:1:exon
so has part: feature:1183623-1183732:1:exon
so has part: feature:1183842-1183976:1:exon

XP_023844447.1
type: Protein
SIO_000068: ncbiprotein

position:1174245:1
position: 1174245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183976:1
position: 1183976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1174245-1174397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174919-1175080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175242-1175382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1179741-1179813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1180350-1180441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181860-1182042:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182446-1182574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182656-1182746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1182851-1183034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183623-1183732:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183842-1183976:1:exon

LOC112081093
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC112081093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<1229258..>1233206)
location: region:1229258-1233206:-1
so has part: feature:1229258-1233206:-1:exon
subclass of: SO_0000010

112081093
type: Gene
SIO_000068: ncbigene

position:1229258:-1
position: 1229258
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1233206:-1
position: 1233206
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229258-1233206:-1:exon

LOC112081093
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC112081093
product: putative uncharacterized protein DDB_G0271982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_024147112.1
SIO_010081: LOC112081093
subclass of: SO_0000673
so part of: LOC112081093
location: complement(join(<1229258..1229305,1230418..1230477,1233159..>1233206))
location: region:1229258-1233206:-1
so has part: feature:1233159-1233206:-1:exon
so has part: feature:1230418-1230477:-1:exon
so has part: feature:1229258-1229305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1233159-1233206:-1:exon

position:1233159:-1
position: 1233159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1230418-1230477:-1:exon

position:1230418:-1
position: 1230418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230477:-1
position: 1230477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1229258-1229305:-1:exon

position:1229305:-1
position: 1229305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112081093
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC112081093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein DDB_G0271982
translation: REKEVREKEEKEVREREIGGEREREREGKGEREREREEKERKRSEEREREGQ
SIO_010081: LOC112081093
subclass of: SO_0000673
so part of: LOC112081093
location: complement(join(<1229258..1229305,1230418..1230477,1233159..>1233206))
location: region:1229258-1233206:-1
so has part: feature:1233159-1233206:-1:exon
so has part: feature:1230418-1230477:-1:exon
so has part: feature:1229258-1229305:-1:exon

XP_024002880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1233159-1233206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230418-1230477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229258-1229305:-1:exon

LOC111964848
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1234032..>1235594
location: region:1234032-1235594:1
so has part: feature:1234032-1235594:1:exon
subclass of: SO_0000010

111964848
type: Gene
SIO_000068: ncbigene

position:1234032:1
position: 1234032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235594:1
position: 1235594
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1234032-1235594:1:exon

LOC111964848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964848
product: chloride channel protein 1
inference: similar to RNA sequence (same species):INSD:GGAP01026886.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 2190 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_023988680.1
SIO_010081: LOC111964848
subclass of: SO_0000673
so part of: LOC111964848
location: join(1234032..1234154,1235516..>1235594)
location: region:1234032-1235594:1
so has part: feature:1234032-1234154:1:exon
so has part: feature:1235516-1235594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1234032-1234154:1:exon

position:1234154:1
position: 1234154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235516-1235594:1:exon

position:1235516:1
position: 1235516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111964848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8036
gene: LOC111964848
inference: similar to RNA sequence (same species):INSD:GGAP01026886.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 2144 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride channel protein 1
translation: MSIFSGVYENPCGYTDILTVGCAVGVGCCFGTPLGGVLFSIEVTSTYFAVRNYWRGYFAATFSAFIFRVLSVWNKDAVTITALFRTNFRMDFPFDLQELPAFAIIGISCGFLGAFFVYLNRQVVLVMRRQTALTRFLTKHRLIYPGAVTFVIATLTFPPGFGQFMAGELMPRECINSLFDNFTWTELSATALPPGLGRSSAWLHPDVSVFLILLLFFVMKFWMSAVSTTMPIPAGAFMPVFILGASFGRLVGEIMAALFPHGILFDGILYRIIPGGYAVIGAAALTGAVTHTVSTAVICFELTGQISHILPMMVAVILANMVAQGLQPSLYDSIIQIKKLPYLPELGFGHISQYNIFVEDIMVRKVKFLSLQSTYRELIYLLDSISLKTIPLVDSTDSMILLGSIDRSELHALCDWWLSAERRIFRQEQCLQEQNQYAKDSWESFAFVDEDDEESGDKSTPVQEERNGPLPSPKPQEPSSNHTAPDKGPLQSVRRTLWNIFSSQDKQAEEPRANPLLSDTMTPEEIKEWEEAEMDKPMEIDQIRIDPSPFQLVERTSLHKTHTLFSLLGLSHAYVTSIGKLVGVVALKELQKAIEASTHSGVRLRPPLASFRNIRRKSSKPQTTSAPAAPSSPLSPAPVAPHAPAPPPPPTQEEEEMAVWIEGTRREVAAVNSSSSSSSSGTGSSSSNGSPSLPHSLPLSLPLTSPLSIPLTVALSVPLAAFSTPLPALRAATEQQVEEEEESNDEEPI
SIO_010081: LOC111964848
subclass of: SO_0000673
so part of: LOC111964848
location: join(1234128..1234154,1235516..>1235594)
location: region:1234128-1235594:1
so has part: feature:1234128-1234154:1:exon
so has part: feature:1235516-1235594:1:exon

XP_023844448.1
type: Protein
SIO_000068: ncbiprotein

position:1234128:1
position: 1234128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1234128-1234154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1235516-1235594:1:exon

LOC111964853
type: Gene
subclass of: SO_0000704
RO_0002162: 8036
gene: LOC111964853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1268860..1271301)
location: region:1268860-1271301:-1
so has part: feature:1268860-1271301:-1:exon
subclass of: SO_0000010

111964853
type: Gene
SIO_000068: ncbigene

position:1268860:-1
position: 1268860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271301:-1
position: 1271301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268860-1271301:-1:exon

LOC111964853
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8036
gene: LOC111964853
product: platelet-activating factor acetylhydrolase IB subunit gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_023988687.1
SIO_010081: LOC111964853
subclass of: SO_0000673
so part of: LOC111964853
location: complement(join(1268860..1269033,1269256..1269372,1269554..1269643,1269835..1269927,1271046..1271301))
location: region:1268860-1271301:-1
so has part: feature:1271046-1271301:-1:exon
so has part: feature:1269835-1269927:-1:exon
so has part: feature:1269554-1269643:-1:exon
so has part: feature:1269256-1269372:-1:exon
so has part: feature:1268860-1269033:-1:exon