Enterobacteria phage T4, complete genome.
type: Entry
definition: Enterobacteria phage T4, complete genome.
sequence version: NC_000866.4
sequence date: 2023-01-11
sequence: sequence
division: PHG
label: NC_000866.4
type: RefSeq
SIO_000068: refseq
dblink: PRJNA485481
keyword: RefSeq
source: Escherichia phage T4
organism: Escherichia phage T4
taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Tevenvirinae; Tequatrovirus.
reference: 1
references: 12626685
reference: 2
references: 12228725
reference: 3
references: 12399370
reference: 4
references: 11976345
reference: 5
references: 11902835
reference: 6
references: 11825876
reference: 7
references: 11441020
reference: 8
references: 11532126
reference: 9
references: 10559179
reference: 10
references: 9858714
reference: 11
references: 9533879
reference: 12
references: 9560385
reference: 13
references: 9560373
reference: 14
references: 9387160
reference: 15
references: 9326373
reference: 16
references: 9272856
reference: 17
references: 9233823
reference: 18
references: 8921865
reference: 19
references: 8878669
reference: 20
references: 7791212
reference: 21
references: 7612935
reference: 22
references: 7961708
reference: 23
references: 8053153
reference: 24
references: 8163181
reference: 25
references: 8383243
reference: 26
references: 8416914
reference: 27
references: 1328208
reference: 28
references: 1400206
reference: 29
references: 1631169
reference: 30
references: 1587487
reference: 31
references: 1446076
reference: 32
references: 1871975
reference: 33

sequence
subclass of: SO_0000353
sequence length: 168903
topology: linear
so has quality: SO_0000987
location: 1..168903
location: region:1-168903:1
RO_0002162: 2681598

NC_000866
type: RefSeq
SIO_000068: refseq

PRJNA485481
type: BioProject
SIO_000068: bioproject

1
title: Bacteriophage T4 genome
author: Miller, E.S.
author: Kutter, E.
author: Mosig, G.
author: Arisaka, F.
author: Kunisawa, T.
author: Ruger, W.
journal: Microbiol. Mol. Biol. Rev.
volume: 67
issue: 1
pages: 86-156
year: 2003
pubmed: 12626685

12626685
type: PubMed
SIO_000068: pubmed

2
title: Bacteriophage T4 RNA ligase 2 (gp24.1) exemplifies a family of RNA ligases found in all phylogenetic domains
author: Ho, C.K.
author: Shuman, S.
journal: Proc. Natl. Acad. Sci. U.S.A.
volume: 99
issue: 20
pages: 12709-12714
year: 2002
pubmed: 12228725
comments: Erratum:[Proc Natl Acad Sci U S A 2002 Oct 15;99(21):13961]

12228725
type: PubMed
SIO_000068: pubmed

3
title: Focused genetic recombination of bacteriophage t4 initiated by double-strand breaks
author: Shcherbakov, V.
author: Granovsky, I.
author: Plugina, L.
author: Shcherbakova, T.
author: Sizova, S.
author: Pyatkov, K.
author: Shlyapnikov, M.
author: Shubina, O.
journal: Genetics
volume: 162
issue: 2
pages: 543-556
year: 2002
pubmed: 12399370

12399370
type: PubMed
SIO_000068: pubmed

4
title: The gene e.1 (nudE.1) of T4 bacteriophage designates a new member of the Nudix hydrolase superfamily active on flavin adenine dinucleotide, adenosine 5'-triphospho-5'-adenosine, and ADP-ribose
author: Xu, W.
author: Gauss, P.
author: Shen, J.
author: Dunn, C.A.
author: Bessman, M.J.
journal: J. Biol. Chem.
volume: 277
issue: 26
pages: 23181-23185
year: 2002
pubmed: 11976345

11976345
type: PubMed
SIO_000068: pubmed

5
title: Identification of two middle promoters upstream DNA ligase gene 30 of bacteriophage T4
author: Truncaite, L.
author: Zajanckauskaite, A.
author: Nivinskas, R.
journal: J. Mol. Biol.
volume: 317
issue: 2
pages: 179-190
year: 2002
pubmed: 11902835

11902835
type: PubMed
SIO_000068: pubmed

6
title: Intronless homing: site-specific endonuclease SegF of bacteriophage T4 mediates localized marker exclusion analogous to homing endonucleases of group I introns
author: Belle, A.
author: Landthaler, M.
author: Shub, D.A.
journal: Genes Dev.
volume: 16
issue: 3
pages: 351-362
year: 2002
pubmed: 11825876

11825876
type: PubMed
SIO_000068: pubmed

7
title: Structural basis for the thioredoxin-like activity profile of the glutaredoxin-like NrdH-redoxin from Escherichia coli
author: Stehr, M.
author: Schneider, G.
author: Aslund, F.
author: Holmgren, A.
author: Lindqvist, Y.
journal: J. Biol. Chem.
volume: 276
issue: 38
pages: 35836-35841
year: 2001
pubmed: 11441020

11441020
type: PubMed
SIO_000068: pubmed

8
title: An ancient player unmasked: T4 rI encodes a t-specific antiholin
author: Ramanculov, E.
author: Young, R.
journal: Mol. Microbiol.
volume: 41
issue: 3
pages: 575-583
year: 2001
pubmed: 11532126

11532126
type: PubMed
SIO_000068: pubmed

9
title: Two new early bacteriophage T4 genes, repEA and repEB, that are important for DNA replication initiated from origin E
author: Vaiskunaite, R.
author: Miller, A.
author: Davenport, L.
author: Mosig, G.
journal: J. Bacteriol.
volume: 181
issue: 22
pages: 7115-7125
year: 1999
pubmed: 10559179

10559179
type: PubMed
SIO_000068: pubmed

10
title: Several new bacteriophage T4 genes, mapped by sequencing deletion endpoints between genes 56 (dCTPase) and dda (a DNA-dependent ATPase-helicase) modulate transcription
author: Mosig, G.
author: Colowick, N.E.
author: Pietz, B.C.
journal: Gene 223 (1-2), 143-155 (1998)
pubmed: 9858714

9858714
type: PubMed
SIO_000068: pubmed

11
title: The largest (70 kDa) product of the bacteriophage T4 DNA terminase gene 17 binds to single-stranded DNA segments and digests them towards junctions with double-stranded DNA
author: Franklin, J.L.
author: Haseltine, D.
author: Davenport, L.
author: Mosig, G.
journal: J. Mol. Biol.
volume: 277
issue: 3
pages: 541-557
year: 1998
pubmed: 9533879

9533879
type: PubMed
SIO_000068: pubmed

12
title: The spectrum of acridine resistant mutants of bacteriophage T4 reveals cryptic effects of the tsL141 DNA polymerase allele on spontaneous mutagenesis
author: Wang, F.J.
author: Ripley, L.S.
journal: Genetics
volume: 148
issue: 4
pages: 1655-1665
year: 1998
pubmed: 9560385

9560385
type: PubMed
SIO_000068: pubmed

13
title: The roles of the bacteriophage T4 r genes in lysis inhibition and fine-structure genetics: a new perspective
author: Paddison, P.
author: Abedon, S.T.
author: Dressman, H.K.
author: Gailbreath, K.
author: Tracy, J.
author: Mosser, E.
author: Neitzel, J.
author: Guttman, B.
author: Kutter, E.
journal: Genetics
volume: 148
issue: 4
pages: 1539-1550
year: 1998
pubmed: 9560373

9560373
type: PubMed
SIO_000068: pubmed

14
title: Nucleotide sequence and revised map location of the arn gene from bacteriophage T4
author: Kim, B.C.
author: Kim, K.
author: Park, E.H.
author: Lim, C.J.
journal: Mol. Cells
volume: 7
issue: 5
pages: 694-696
year: 1997
pubmed: 9387160

9387160
type: PubMed
SIO_000068: pubmed

15
title: A phage T4 site-specific endonuclease, SegE, is responsible for a non-reciprocal genetic exchange between T-even-related phages
author: Kadyrov, F.A.
author: Shlyapnikov, M.G.
author: Kryukov, V.M.
journal: FEBS Lett.
volume: 415
issue: 1
pages: 75-80
year: 1997
pubmed: 9326373

9326373
type: PubMed
SIO_000068: pubmed

16
title: A rare type of overlapping genes in bacteriophage T4: gene 30.3' is completely embedded within gene 30.3 by one position downstream
author: Zajanckauskaite, A.
author: Malys, N.
author: Nivinskas, R.
journal: Gene
volume: 194
issue: 2
pages: 157-162
year: 1997
pubmed: 9272856

9272856
type: PubMed
SIO_000068: pubmed

17
title: Bacteriophage T4 UvsW protein is a helicase involved in recombination, repair and the regulation of DNA replication origins
author: Carles-Kinch, K.
author: George, J.W.
author: Kreuzer, K.N.
journal: EMBO J.
volume: 16
issue: 13
pages: 4142-4151
year: 1997
pubmed: 9233823

9233823
type: PubMed
SIO_000068: pubmed

18
title: Expression of the bacteriophage T4 DNA terminase genes 16 and 17 yields multiple proteins
author: Franklin, J.L.
author: Mosig, G.
journal: Gene 177 (1-2), 179-189 (1996)
pubmed: 8921865

8921865
type: PubMed
SIO_000068: pubmed

19
title: Destabilization of bacteriophage T4 mRNAs by a mutation of gene 61.5
author: Kai, T.
author: Selick, H.E.
author: Yonesaki, T.
journal: Genetics
volume: 144
issue: 1
pages: 7-14
year: 1996
pubmed: 8878669

8878669
type: PubMed
SIO_000068: pubmed

20
title: Phage T4-coded Stp: double-edged effector of coupled DNA and tRNA-restriction systems
author: Penner, M.
author: Morad, I.
author: Snyder, L.
author: Kaufmann, G.
journal: J. Mol. Biol.
volume: 249
issue: 5
pages: 857-868
year: 1995
pubmed: 7791212

7791212
type: PubMed
SIO_000068: pubmed

21
title: Bacteriophage T4 gene 28
author: Bova, R.
author: Cascino, A.
author: Cipollaro, M.
author: Gargano, S.
author: Grau, O.
author: Micheli, M.R.
author: Santoro, M.
author: Scarlato, V.
author: Storlazzi, A.
journal: DNA Seq.
volume: 5
issue: 3
pages: 199-201
year: 1995
pubmed: 7612935

7612935
type: PubMed
SIO_000068: pubmed

22
title: Bacteriophage T4 gene 55.9 encodes an activity required for anaerobic ribonucleotide reduction
author: Young, P.
author: Ohman, M.
author: Sjoberg, B.M.
journal: J. Biol. Chem.
volume: 269
issue: 45
pages: 27815-27818
year: 1994
pubmed: 7961708

7961708
type: PubMed
SIO_000068: pubmed

23
title: The ADP-ribosyltransferases (gpAlt) of bacteriophages T2, T4, and T6: sequencing of the genes and comparison of their products
author: Koch, T.
author: Ruger, W.
journal: Virology
volume: 203
issue: 2
pages: 294-298
year: 1994
pubmed: 8053153

8053153
type: PubMed
SIO_000068: pubmed

24
title: Direct PCR sequencing of the ndd gene of bacteriophage T4: identification of a product involved in bacterial nucleoid disruption
author: Bouet, J.Y.
author: Woszczyk, J.
author: Repoila, F.
author: Francois, V.
author: Louarn, J.M.
author: Krisch, H.M.
journal: Gene
volume: 141
issue: 1
pages: 9-16
year: 1994
pubmed: 8163181

8163181
type: PubMed
SIO_000068: pubmed

25
title: Analysis of five presumptive protein-coding sequences clustered between the primosome genes, 41 and 61, of bacteriophages T4, T2, and T6
author: Selick, H.E.
author: Stormo, G.D.
author: Dyson, R.L.
author: Alberts, B.M.
journal: J. Virol.
volume: 67
issue: 4
pages: 2305-2316
year: 1993
pubmed: 8383243

8383243
type: PubMed
SIO_000068: pubmed

26
title: The asiA gene of bacteriophage T4 codes for the anti-sigma 70 protein
author: Orsini, G.
author: Ouhammouch, M.
author: Le Caer, J.P.
author: Brody, E.N.
journal: J. Bacteriol.
volume: 175
issue: 1
pages: 85-93
year: 1993
pubmed: 8416914

8416914
type: PubMed
SIO_000068: pubmed

27
title: Overexpression, purification, sequence analysis, and characterization of the T4 bacteriophage dda DNA helicase
author: Hacker, K.J.
author: Alberts, B.M.
journal: J. Biol. Chem.
volume: 267
issue: 29
pages: 20674-20681
year: 1992
pubmed: 1328208

1328208
type: PubMed
SIO_000068: pubmed

28
title: Sequence and characterization of the bacteriophage T4 comC alpha gene product, a possible transcription antitermination factor
author: Sanson, B.
author: Uzan, M.
journal: J. Bacteriol.
volume: 174
issue: 20
pages: 6539-6547
year: 1992
pubmed: 1400206

1400206
type: PubMed
SIO_000068: pubmed

29
title: Identification of a family of bacteriophage T4 genes encoding proteins similar to those present in group I introns of fungi and phage
author: Sharma, M.
author: Ellis, R.L.
author: Hinton, D.M.
journal: Proc. Natl. Acad. Sci. U.S.A.
volume: 89
issue: 14
pages: 6658-6662
year: 1992
pubmed: 1631169

1631169
type: PubMed
SIO_000068: pubmed

30
title: Gene rIII is the nearest downstream neighbour of bacteriophage T4 gene 31
author: Raudonikiene, A.
author: Nivinskas, R.
journal: Gene
volume: 114
issue: 1
pages: 85-90
year: 1992
pubmed: 1587487

1587487
type: PubMed
SIO_000068: pubmed

31
title: The nucleotide sequence between genes 31 and 30 of bacteriophage T4
author: Nivinskas, R.
author: Zajanckauskaite, A.
author: Raudonikiene, A.
author: Viteniene, I.
journal: DNA Seq.
volume: 2
issue: 6
pages: 405-409
year: 1992
pubmed: 1446076

1446076
type: PubMed
SIO_000068: pubmed

32
title: Two bacteriophage T4 base plate genes (25 and 26) and the DNA repair gene uvsY belong to spatially and temporally overlapping transcription units
author: Gruidl, M.E.
author: Chen, T.C.
author: Gargano, S.
author: Storlazzi, A.
author: Cascino, A.
author: Mosig, G.
journal: Virology
volume: 184
issue: 1
pages: 359-369
year: 1991
pubmed: 1871975

1871975
type: PubMed
SIO_000068: pubmed

33
title: Nucleotide sequences of bacteriophage T4 genes 6, 7 and 8
author: Efimov, V.P.
author: Prilipov, A.G.
author: Mesyanzhinov, V.V.
journal: Nucleic Acids Res. 18 (17), 5313 (1990)
pubmed: 2402473

2402473
type: PubMed
SIO_000068: pubmed

34
title: Nucleotide sequence and control of transcription of the bacteriophage T4 motA regulatory gene
author: Uzan, M.
author: Brody, E.
author: Favre, R.
journal: Mol. Microbiol.
volume: 4
issue: 9
pages: 1487-1496
year: 1990
pubmed: 2287273

2287273
type: PubMed
SIO_000068: pubmed

35
title: The nucleotide sequence of the region of bacteriophage T4 inh(lip)-hoc genes
author: Kaliman, A.V.
author: Khasanova, M.A.
author: Kryukov, V.M.
author: Tanyashin, V.I.
author: Bayev, A.A.
journal: Nucleic Acids Res. 18 (14), 4277 (1990)
pubmed: 2377482

2377482
type: PubMed
SIO_000068: pubmed

36
title: Bacteriophage T4 DNA packaging genes 16 and 17
author: Powell, D.
author: Franklin, J.
author: Arisaka, F.
author: Mosig, G.
journal: Nucleic Acids Res. 18 (13), 4005 (1990)
pubmed: 2374730

2374730
type: PubMed
SIO_000068: pubmed

37
title: The rIIA gene of bacteriophage T4. I. Its DNA sequence and discovery of a new open reading frame between genes 60 and rIIA
author: Daegelen, P.
author: Brody, E.
journal: Genetics
volume: 125
issue: 2
pages: 237-248
year: 1990
pubmed: 2379817

2379817
type: PubMed
SIO_000068: pubmed

38
title: Bacteriophage T4 gene 27
author: Bova, R.
author: Cascino, A.
author: Cipollaro, M.
author: Grau, O.
author: Micheli, M.R.
author: Santoro, M.
author: Storlazzi, A.
author: Scarlato, V.
author: Gargano, S.
journal: Nucleic Acids Res. 18 (10), 3046 (1990)
pubmed: 2349100

2349100
type: PubMed
SIO_000068: pubmed

39
title: The bacteriophage T4 gene mrh whose product inhibits late T4 gene expression in an Escherichia coli rpoH (sigma 32) mutant
author: Frazier, M.W.
author: Mosig, G.
journal: Gene
volume: 88
issue: 1
pages: 7-14
year: 1990
pubmed: 1692800

1692800
type: PubMed
SIO_000068: pubmed

40
title: Cloning, sequence analysis, and expression of the bacteriophage T4 cd gene
author: Maley, G.F.
author: Duceman, B.W.
author: Wang, A.M.
author: Martinez, J.
author: Maley, F.
journal: J. Biol. Chem.
volume: 265
issue: 1
pages: 47-51
year: 1990
pubmed: 2136740

2136740
type: PubMed
SIO_000068: pubmed

41
title: Nucleotide and deduced amino acid sequences of bacteriophage T4 gene 22
author: Marusich, E.I.
author: Mesyanzhinov, V.V.
journal: Nucleic Acids Res. 17 (21), 8865 (1989)
pubmed: 2587226

2587226
type: PubMed
SIO_000068: pubmed

42
title: Functional relationships and structural determinants of two bacteriophage T4 lysozymes: a soluble (gene e) and a baseplate-associated (gene 5) protein
author: Mosig, G.
author: Lin, G.W.
author: Franklin, J.
author: Fan, W.H.
journal: New Biol.
volume: 1
issue: 2
pages: 171-179
year: 1989
pubmed: 2488704

2488704
type: PubMed
SIO_000068: pubmed

43
title: Nucleotide and deduced amino acid sequences of bacteriophage T4 gene 20
author: Marusich, E.I.
author: Mesyanzhinov, V.V.
journal: Nucleic Acids Res. 17 (18), 7514 (1989)
pubmed: 2798102

2798102
type: PubMed
SIO_000068: pubmed

44
title: Organization of the bacteriophage T4 genome between map positions 150.745 and 145.824
author: Hahn, S.
author: Ruger, W.
journal: Nucleic Acids Res. 17 (16), 6729 (1989)
pubmed: 2674900

2674900
type: PubMed
SIO_000068: pubmed

45
title: Altered expression of the bacteriophage T4 gene 41 (primase-helicase) in an Escherichia coli rho mutant
author: Hinton, D.M.
journal: J. Biol. Chem.
volume: 264
issue: 24
pages: 14440-14446
year: 1989
pubmed: 2668290

2668290
type: PubMed
SIO_000068: pubmed

46
title: Nucleotide sequence of the alt gene of bacteriophage T4
author: Hilse, D.
author: Koch, T.
author: Ruger, W.
journal: Nucleic Acids Res. 17 (16), 6731 (1989)
pubmed: 2506526

2506526
type: PubMed
SIO_000068: pubmed

47
title: Bacteriophage T4 late gene expression: overlapping promoters direct divergent transcription of the base plate gene cluster
author: Scarlato, V.
author: Storlazzi, A.
author: Gargano, S.
author: Cascino, A.
journal: Virology
volume: 171
issue: 2
pages: 475-483
year: 1989
pubmed: 2763463

2763463
type: PubMed
SIO_000068: pubmed

48
title: The immunity (imm) gene of Escherichia coli bacteriophage T4
author: Lu, M.J.
author: Henning, U.
journal: J. Virol.
volume: 63
issue: 8
pages: 3472-3478
year: 1989
pubmed: 2746737

2746737
type: PubMed
SIO_000068: pubmed

49
title: Sequencing, cloning and overexpression of genes of bacteriophage T4 between map positions 74.325 and 77.184
author: Koch, T.
author: Lamm, N.
author: Ruger, W.
journal: Nucleic Acids Res. 17 (11), 4392 (1989)
pubmed: 2740234

2740234
type: PubMed
SIO_000068: pubmed

50
title: Nucleotide sequences of bacteriophage T4 genes 13, 14 and 15
author: Selivanov, N.A.
author: Prilipov, A.G.
author: Mesyanzhinov, V.V.
journal: Nucleic Acids Res. 17 (9), 3583 (1989)
pubmed: 2657662

2657662
type: PubMed
SIO_000068: pubmed

51
title: Nucleotide sequences of bacteriophage T4 genes 9, 10 and 11
author: Prilipov, A.G.
author: Selivanov, N.A.
author: Efimov, V.P.
author: Marusich, E.I.
author: Mesyanzhinov, V.V.
journal: Nucleic Acids Res. 17 (8), 3303 (1989)
pubmed: 2726468

2726468
type: PubMed
SIO_000068: pubmed

52
title: Cloning, sequence, and expression of the temperature-dependent phage T4 capsid assembly gene 31
author: Nivinskas, R.
author: Black, L.W.
journal: Gene
volume: 73
issue: 1
pages: 251-257
year: 1988
pubmed: 3072258

3072258
type: PubMed
SIO_000068: pubmed

53
title: Nucleotide and deduced amino acid sequence of bacteriophage T4 gene wac
author: Prilipov, A.G.
author: Selivanov, N.A.
author: Nikolaeva, L.I.
author: Mesyanzhinov, V.V.
journal: Nucleic Acids Res. 16 (21), 10361 (1988)
pubmed: 3194206

3194206
type: PubMed
SIO_000068: pubmed

54
title: Total sequence, flanking regions, and transcripts of bacteriophage T4 nrdA gene, coding for alpha chain of ribonucleoside diphosphate reductase
author: Tseng, M.J.
author: Hilfinger, J.M.
author: Walsh, A.
author: Greenberg, G.R.
journal: J. Biol. Chem.
volume: 263
issue: 31
pages: 16242-16251
year: 1988
pubmed: 2846540

2846540
type: PubMed
SIO_000068: pubmed

55
title: Primary structure of T4 DNA polymerase. Evolutionary relatedness to eucaryotic and other procaryotic DNA polymerases
author: Spicer, E.K.
author: Rush, J.
author: Fung, C.
author: Reha-Krantz, L.J.
author: Karam, J.D.
author: Konigsberg, W.H.
journal: J. Biol. Chem.
volume: 263
issue: 16
pages: 7478-7486
year: 1988
pubmed: 3286635

3286635
type: PubMed
SIO_000068: pubmed

56
title: The structure of three bacteriophage T4 genes required for tail-tube assembly
author: Ishimoto, L.K.
author: Ishimoto, K.S.
author: Cascino, A.
author: Cipollaro, M.
author: Eiserling, F.A.
journal: Virology
volume: 164
issue: 1
pages: 81-90
year: 1988
pubmed: 3363870

3363870
type: PubMed
SIO_000068: pubmed

57
title: Nucleotide sequence of the tail sheath gene of bacteriophage T4 and amino acid sequence of its product
author: Arisaka, F.
author: Nakako, T.
author: Takahashi, H.
author: Ishii, S.
journal: J. Virol.
volume: 62
issue: 4
pages: 1186-1193
year: 1988
pubmed: 2964531

2964531
type: PubMed
SIO_000068: pubmed

58
title: Nucleotide and deduced amino acid sequence of bacteriophage T4 gene 12
author: Selivanov, N.A.
author: Prilipov, A.G.
author: Mesyanzhinov, V.V.
journal: Nucleic Acids Res. 16 (5), 2334 (1988)
pubmed: 3357780

3357780
type: PubMed
SIO_000068: pubmed

59
title: Deoxycytidylate hydroxymethylase gene of bacteriophage T4. Nucleotide sequence determination and over-expression of the gene
author: Lamm, N.
author: Wang, Y.
author: Mathews, C.K.
author: Ruger, W.
journal: Eur. J. Biochem.
volume: 172
issue: 3
pages: 553-563
year: 1988
pubmed: 3350013

3350013
type: PubMed
SIO_000068: pubmed

60
title: Nucleotide sequence of the tail tube structural gene of bacteriophage T4
author: Arisaka, F.
author: Ishimoto, L.
author: Kassavetis, G.
author: Kumazaki, T.
author: Ishii, S.
journal: J. Virol.
volume: 62
issue: 3
pages: 882-886
year: 1988
pubmed: 2963141

2963141
type: PubMed
SIO_000068: pubmed

61
title: A persistent untranslated sequence within bacteriophage T4 DNA topoisomerase gene 60
author: Huang, W.M.
author: Ao, S.Z.
author: Casjens, S.
author: Orlandi, R.
author: Zeikus, R.
author: Weiss, R.
author: Winge, D.
author: Fang, M.
journal: Science
volume: 239
issue: 4843
pages: 1005-1012
year: 1988
pubmed: 2830666

2830666
type: PubMed
SIO_000068: pubmed

62
title: Nucleotide sequence of gene t (lysis gene) of the E. coli phage T4
author: Montag, D.
author: Degen, M.
author: Henning, U.
journal: Nucleic Acids Res. 15 (16), 6736 (1987)
pubmed: 3628006

3628006
type: PubMed
SIO_000068: pubmed

63
title: Receptor-recognizing proteins of T-even type bacteriophages. Constant and hypervariable regions and an unusual case of evolution
author: Montag, D.
author: Riede, I.
author: Eschbach, M.L.
author: Degen, M.
author: Henning, U.
journal: J. Mol. Biol.
volume: 196
issue: 1
pages: 165-174
year: 1987
pubmed: 2958637

2958637
type: PubMed
SIO_000068: pubmed

64
title: Nucleotide sequence and primary structures of gene products coded for by the T4 genome between map positions 48.266 kb and 39.166 kb
author: Tomaschewski, J.
author: Ruger, W.
journal: Nucleic Acids Res.
volume: 15
issue: 8
pages: 3632-3633
year: 1987
pubmed: 3575111

3575111
type: PubMed
SIO_000068: pubmed

65
title: Identification of two new bacteriophage T4 genes that may have roles in transcription and DNA replication
author: Hsu, T.
author: Wei, R.X.
author: Dawson, M.
author: Karam, J.D.
journal: J. Virol.
volume: 61
issue: 2
pages: 366-374
year: 1987
pubmed: 3543399

3543399
type: PubMed
SIO_000068: pubmed

66
title: The bacteriophage T4 dexA gene: sequence and analysis of a gene conditionally required for DNA replication
author: Gauss, P.
author: Gayle, M.
author: Winter, R.B.
author: Gold, L.
journal: Mol. Gen. Genet.
volume: 206
issue: 1
pages: 24-34
year: 1987
pubmed: 3553862

3553862
type: PubMed
SIO_000068: pubmed

67
title: Localization of the T4 phage ribonucleotide reductase B1 subunit gene and the nucleotide sequence of its upstream and 5' coding regions
author: Chu, F.K.
author: Maley, G.F.
author: Wang, A.M.
author: Maley, F.
journal: Gene
volume: 57
issue: 1
pages: 143-148
year: 1987
pubmed: 3322944
comments: Erratum:[Gene 1988 May 30;65(2):337]

3322944
type: PubMed
SIO_000068: pubmed

68
title: Nucleotide sequence and analysis of the 58.3 to 65.5-kb early region of bacteriophage T4
author: Valerie, K.
author: Stevens, J.
author: Lynch, M.
author: Henderson, E.E.
author: de Riel, J.K.
journal: Nucleic Acids Res.
volume: 14
issue: 21
pages: 8637-8654
year: 1986
pubmed: 3024113

3024113
type: PubMed
SIO_000068: pubmed

69
title: Nucleotide sequence of a type II DNA topoisomerase gene. Bacteriophage T4 gene 39
author: Huang, W.M.
journal: Nucleic Acids Res.
volume: 14
issue: 19
pages: 7751-7765
year: 1986
pubmed: 3022233

3022233
type: PubMed
SIO_000068: pubmed

70
title: The 52-protein subunit of T4 DNA topoisomerase is homologous to the gyrA-protein of gyrase
author: Huang, W.M.
journal: Nucleic Acids Res.
volume: 14
issue: 18
pages: 7379-7390
year: 1986
pubmed: 3020513

3020513
type: PubMed
SIO_000068: pubmed

71
title: The bacteriophage T4 gene for the small subunit of ribonucleotide reductase contains an intron
author: Sjoberg, B.M.
author: Hahne, S.
author: Mathews, C.Z.
author: Mathews, C.K.
author: Rand, K.N.
author: Gait, M.J.
journal: EMBO J.
volume: 5
issue: 8
pages: 2031-2036
year: 1986
pubmed: 3530746

3530746
type: PubMed
SIO_000068: pubmed

72
title: Characterization of the intron in the phage T4 thymidylate synthase gene and evidence for its self-excision from the primary transcript
author: Chu, F.K.
author: Maley, G.F.
author: West, D.K.
author: Belfort, M.
author: Maley, F.
journal: Cell
volume: 45
issue: 2
pages: 157-166
year: 1986
pubmed: 3698096

3698096
type: PubMed
SIO_000068: pubmed

73
title: The nucleotide sequence of gene 21 of bacteriophage T4 coding for the prohead protease
author: Keller, B.
author: Bickle, T.A.
journal: Gene
volume: 49
issue: 2
pages: 245-251
year: 1986
pubmed: 3552886

3552886
type: PubMed
SIO_000068: pubmed

74
title: T4-induced alpha- and beta-glucosyltransferase: cloning of the genes and a comparison of their products based on sequencing data
author: Tomaschewski, J.
author: Gram, H.
author: Crabb, J.W.
author: Ruger, W.
journal: Nucleic Acids Res.
volume: 13
issue: 21
pages: 7551-7568
year: 1985
pubmed: 2999696

2999696
type: PubMed
SIO_000068: pubmed

75
title: Sequence of the T4 recombination gene, uvsX, and its comparison with that of the recA gene of Escherichia coli
author: Fujisawa, H.
author: Yonesaki, T.
author: Minagawa, T.
journal: Nucleic Acids Res.
volume: 13
issue: 20
pages: 7473-7481
year: 1985
pubmed: 2932679

2932679
type: PubMed
SIO_000068: pubmed

76
title: Sequence organization and control of transcription in the bacteriophage T4 tRNA region
author: Broida, J.
author: Abelson, J.
journal: J. Mol. Biol.
volume: 185
issue: 3
pages: 545-563
year: 1985
pubmed: 4057254

4057254
type: PubMed
SIO_000068: pubmed

77
title: T4 polynucleotide kinase; cloning of the gene (pseT) and amplification of its product
author: Midgley, C.A.
author: Murray, N.E.
journal: EMBO J.
volume: 4
issue: 10
pages: 2695-2703
year: 1985
pubmed: 2996886

2996886
type: PubMed
SIO_000068: pubmed

78
title: Genes 55, alpha gt, 47 and 46 of bacteriophage T4: the genomic organization as deduced by sequence analysis
author: Gram, H.
author: Ruger, W.
journal: EMBO J.
volume: 4
issue: 1
pages: 257-264
year: 1985
pubmed: 4018026

4018026
type: PubMed
SIO_000068: pubmed

79
title: Nucleotide sequence of bacteriophage T4 gene 23 and the amino acid sequence of its product
author: Parker, M.L.
author: Christensen, A.C.
author: Boosman, A.
author: Stockard, J.
author: Young, E.T.
author: Doermann, A.H.
journal: J. Mol. Biol.
volume: 180
issue: 3
pages: 399-416
year: 1984
pubmed: 6335532

6335532
type: PubMed
SIO_000068: pubmed

80
title: Regulation of a new bacteriophage T4 gene, 69, that spans an origin of DNA replication
author: Macdonald, P.M.
author: Mosig, G.
journal: EMBO J.
volume: 3
issue: 12
pages: 2863-2871
year: 1984
pubmed: 6098451

6098451
type: PubMed
SIO_000068: pubmed

81
title: Gene 68, a new bacteriophage T4 gene which codes for the 17K prohead core protein is involved in head size determination
author: Keller, B.
author: Sengstag, C.
author: Kellenberger, E.
author: Bickle, T.A.
journal: J. Mol. Biol.
volume: 179
issue: 3
pages: 415-430
year: 1984
pubmed: 6512858

6512858
type: PubMed
SIO_000068: pubmed

82
title: Identification and characterization of the alc gene product of bacteriophage T4
author: Kutter, E.
author: Drivdahl, R.
author: Rand, K.
journal: Genetics
volume: 108
issue: 2
pages: 291-304
year: 1984
pubmed: 6389256

6389256
type: PubMed
SIO_000068: pubmed

83
title: The bacteriophage T4 regA gene: primary sequence of a translational repressor
author: Trojanowska, M.
author: Miller, E.S.
author: Karam, J.
author: Stormo, G.
author: Gold, L.
journal: Nucleic Acids Res.
volume: 12
issue: 15
pages: 5979-5993
year: 1984
pubmed: 6473098

6473098
type: PubMed
SIO_000068: pubmed

84
title: Nucleotide sequence reveals overlap between T4 phage genes encoding dihydrofolate reductase and thymidylate synthase
author: Purohit, S.
author: Mathews, C.K.
journal: J. Biol. Chem.
volume: 259
issue: 10
pages: 6261-6266
year: 1984
pubmed: 6327673

6327673
type: PubMed
SIO_000068: pubmed

85
title: Sequence and cloning of bacteriophage T4 gene 63 encoding RNA ligase and tail fibre attachment activities
author: Rand, K.N.
author: Gait, M.J.
journal: EMBO J.
volume: 3
issue: 2
pages: 397-402
year: 1984
pubmed: 6370680

6370680
type: PubMed
SIO_000068: pubmed

86
title: Primary structure and genetic organization of phage T4 DNA ligase
author: Armstrong, J.
author: Brown, R.S.
author: Tsugita, A.
journal: Nucleic Acids Res.
volume: 11
issue: 20
pages: 7145-7156
year: 1983
pubmed: 6314278

6314278
type: PubMed
SIO_000068: pubmed

87
title: Nucleotide sequence of the lysozyme gene of bacteriophage T4. Analysis of mutations involving repeated sequences
author: Owen, J.E.
author: Schultz, D.W.
author: Taylor, A.
author: Smith, G.R.
journal: J. Mol. Biol.
volume: 165
issue: 2
pages: 229-248
year: 1983
pubmed: 6302287

6302287
type: PubMed
SIO_000068: pubmed

88
title: Organization and Structure of Four T4 Genes Coding for DNA Replication Proteins
author: Spicer, E.K.
author: Konigsberg, W.H.
journal: (in) Mathews,C.K., Kutter,E.M., Mosig,G. and Berget,P.B. (Eds.); BACTERIOPHAGE T4: 291-301; American Society for Microbiology, Washington, DC (1983)

89
title: Gene 67, a new, essential bacteriophage T4 head gene codes for a prehead core component, PIP. I. Genetic mapping and DNA sequence
author: Volker, T.A.
author: Gafner, J.
author: Bickle, T.A.
author: Showe, M.K.
journal: J. Mol. Biol.
volume: 161
issue: 4
pages: 479-489
year: 1982
pubmed: 7154087

7154087
type: PubMed
SIO_000068: pubmed

90
title: Nucleotide sequences involved in bacteriophage T4 gene 32 translational self-regulation
author: Krisch, H.M.
author: Allet, B.
journal: Proc. Natl. Acad. Sci. U.S.A.
volume: 79
issue: 16
pages: 4937-4941
year: 1982
pubmed: 6289325

6289325
type: PubMed
SIO_000068: pubmed

91
title: DNA sequence of the tail fibre genes 36 and 37 of bacteriophage T4
author: Oliver, D.B.
author: Crowther, R.A.
journal: J. Mol. Biol.
volume: 153
issue: 3
pages: 545-568
year: 1981
pubmed: 7338921

7338921
type: PubMed
SIO_000068: pubmed

92
title: rII cistrons of bacteriophage T4. DNA sequence around the intercistronic divide and positions of genetic landmarks
author: Pribnow, D.
author: Sigurdson, D.C.
author: Gold, L.
author: Singer, B.S.
author: Napoli, C.
author: Brosius, J.
author: Dull, T.J.
author: Noller, H.F.
journal: J. Mol. Biol.
volume: 149
issue: 3
pages: 337-376
year: 1981
pubmed: 6273585

6273585
type: PubMed
SIO_000068: pubmed

93
title: Analysis of the region between lysozyme and the tRNA genes of bacteriophage T4
author: Anderson, B.
author: Zurabishvili, T.
author: Marusich, E.
author: Schneider, M.
author: Mullins, T.
author: Napuli, A.
author: Mesyanzhinov, V.
author: Neitzel, J.
author: Kutter, E.
journal: Unpublished

94
title: Personal Communication
author: Drake, J.W.
author: Nguyen, D.
author: Dressman, H.
journal: Unpublished

95
title: Personal Communication
author: Goldberg, E.B.
journal: Unpublished

96
title: Gene 61.3 of bacteriophage T4 is the spackle gene
author: Kai, T.
author: Ueno, H.
author: Otsuko, Y.
author: Morimoto, W.
author: Yonesaki, T.
journal: Unpublished

97
author: Kreuzer, K.
journal: Unpublished

98
title: Bacteriophage T4 genome analysis
author: Kutter, E.
author: Arisaka, F.
author: Kunisawa, T.
author: Tsugita, A.
author: Mosig, G.
author: Mesyanzhinov, V.
author: Ruger, W.
author: Stidham, T.
author: Thomas, E.
journal: Unpublished

99
title: The 10.7 kb 'Nonessential' region of Bacteriophage T4 between the genes tk and nrdC: Twenty new T4 genes, generally conserved among T-even phages
author: Mzhavia, N.
author: Djavachishvili, T.
author: Marusich, E.
author: Peterson, S.
author: Anderson, B.
author: Eidemiller, J.
author: Awaya, M.
author: Canada, W.
author: Dimitroff, B.
author: Stidham, T.
author: Blattner, F.
author: Kutter, E.
journal: Unpublished

100
author: Nakanishi, M.
author: Alberts, B.
journal: Unpublished

101
title: Two New Early Bacteriophage T4 Genes, repEA and repEB, are Important for DNA Replication Initiated from Origin E
author: Vaiskunaite, R.
author: Miller, A.
author: Davenport, L.
author: Mosig, G.
journal: Unpublished

102
title: Personal Communication
author: Yasuda, G.
author: Parker, M.
author: Doermann, G.
journal: Unpublished

103
title: Direct Submission
author: Miller, E.S.
author: Kutter, E.
author: Mosig, G.
author: Arisaka, F.
author: Kunisawa, T.
author: Ruger, W.
journal: Submitted (20-MAR-2003) Department of Microbiology, North Carolina State University, Box 7615, Raleigh, NC 27695, USA
comments: Sequence update by submitter

104
title: Direct Submission
journal: Submitted (01-AUG-2000) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

105
title: Direct Submission
author: Kutter, E.
journal: Submitted (21-JUL-2000) The Evergreen State College, Olympia, WA 98505, USA
comments: Sequence update by submitter

106
title: Direct Submission
author: Kutter, E.
journal: Submitted (10-JUN-1999) The Evergreen State College, Olympia, WA 98505, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168903:1
position: 168903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-168903:1:source
so part of: sequence
organism: Escherichia phage T4
mol type: genomic DNA
host: Escherichia coli

2681598
type: Taxonomy
SIO_000068: taxonomy

T4p001
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: rIIA
locus tag: T4p001
so part of: sequence
location: complement(12..2189)
location: region:12-2189:-1
so has part: feature:12-2189:-1:exon
subclass of: SO_0000010

1258593
type: Gene
SIO_000068: ncbigene

position:12:-1
position: 12
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2189:-1
position: 2189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12-2189:-1:exon

T4p001
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: rIIA
locus tag: T4p001
note: membrane integrity protector; mutants give rapid lysis on various lysogenic strains due to effects of specific prophage products, mistakenly interpreted as related to lysis inhibition
codon start: 1
transl table: 11
product: RIIA lysis inhibitor
translation: MIITTEKETILGNGSKSKAFSITASPKVFKILSSDLYTNKIRAVVRELITNMIDAHALNGNPEKFIIQVPGRLDPRFVCRDFGPGMSDFDIQGDDNSPGLYNSYFSSSKAESNDFIGGFGLGSKSPFSYTDTFSITSYHKGEIRGYVAYMDGDGPQIKPTFVKEMGPDDKTGIEIVVPVEEKDFRNFAYEVSYIMRPFKDLAIINGLDREIDYFPDFDDYYGVNPERYWPDRGGLYAIYGGIVYPIDGVIRDRNWLSIRNEVNYIKFPMGSLDIAPSREALSLDDRTRKNIIERVKELSEKAFNEDVKRFKESTSPRHTYRELMKMGYSARDYMISNSVKFTTKNLSYKKMQSMFEPDSKLCNAGVVYEVNLDPRLKRIKQSHETSAVASSYRLFGINTTKINIVIDNIKNRVNIVRGLARALDDSEFNNTLNIHHNERLLFINPEVESQIDLLPDIMAMFESDEVNIHYLSEIEALVKSYIPKVVKSKAPRPKAATAFKFEIKDGRWEKRNYLRLTSEADEITGYVAYMHRSDIFSMDGTTSLCHPSMNILIRMANLIGINEFYVIRPLLQKKVKELGQCQCIFEALRDLYVDAFDDVDYDKYVGYSSSAKRYIDKIIKYPELDFMMKYFSIDEVSEEYTRLANMVSSLQGVYFNGGKDTIGHDIWTVTNLFDVLSNNASKNSDKMVAEFTKKFRIVSDFIGYRNSLSDDEVSQIAKTMKALAA
SIO_010081: T4p001
subclass of: SO_0000673
so part of: T4p001
location: complement(12..2189)
location: region:12-2189:-1
so has part: feature:12-2189:-1:exon

NP_049616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12-2189:-1:exon

T4p002
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: rIIA.1
locus tag: T4p002
so part of: sequence
location: complement(2200..2403)
location: region:2200-2403:-1
so has part: feature:2200-2403:-1:exon
subclass of: SO_0000010

1258774
type: Gene
SIO_000068: ncbigene

position:2200:-1
position: 2200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2403:-1
position: 2403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2200-2403:-1:exon

T4p002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: rIIA.1
locus tag: T4p002
codon start: 1
transl table: 11
product: rIIA.1 hypothetical protein
translation: MKSYKVNLELFDKAVHREYRIIQRFFDMGEAEEFKTRFKDIRDKIQSDTATKDELLEVAEVIKRNMN
SIO_010081: T4p002
subclass of: SO_0000673
so part of: T4p002
location: complement(2200..2403)
location: region:2200-2403:-1
so has part: feature:2200-2403:-1:exon

NP_049617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2200-2403:-1:exon

T4p003
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 60
locus tag: T4p003
so part of: sequence
location: complement(2458..2990)
location: region:2458-2990:-1
so has part: feature:2458-2990:-1:exon
subclass of: SO_0000010

1258779
type: Gene
SIO_000068: ncbigene

position:2458:-1
position: 2458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2990:-1
position: 2990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2458-2990:-1:exon

T4p003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 60
locus tag: T4p003
note: topoisomerase II in T4 and related phages an insertion splits the large Topo II subunit in two parts (gp60 and gp39); a 50-bp segment is inserted in T4 gene 60 that forms an mRNA secondary structure that is translationally bypassed
codon start: 1
transl table: 11
product: DNA topoisomerase II
translation: MKFVKIDSSSVDMKKYKLQNNVRRSIKSSSMNYANVAIMTDADHDGLGSIYPSLLGFFSNWPELFEQGRIRFVKTPVIIAQVGKKQEWFYTVAEYESAKDALPKHSIRYIKGLGSLEKSEYREMIQNPVYDVVKLPENWKELFEMLMGDNADLRKEWMSQ
SIO_010081: T4p003
subclass of: SO_0000673
so part of: T4p003
location: complement(join(2458..2802,2853..2990))
location: region:2458-2990:-1
so has part: feature:2853-2990:-1:exon
so has part: feature:2458-2802:-1:exon

NP_049618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2853-2990:-1:exon

position:2853:-1
position: 2853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2458-2802:-1:exon

position:2802:-1
position: 2802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

T4p003
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 2681598
gene: 60
locus tag: T4p003
note: non-coding translational bypass region in mRNA due to secondary structure formation
SIO_010081: T4p003
subclass of: SO_0000673
so part of: T4p003
location: complement(2803..2852)
location: region:2803-2852:-1
so has part: feature:2803-2852:-1:exon

position:2803:-1
position: 2803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2852:-1
position: 2852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2803-2852:-1:exon

T4p004
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 60.1
locus tag: T4p004
so part of: sequence
location: complement(2971..3351)
location: region:2971-3351:-1
so has part: feature:2971-3351:-1:exon
subclass of: SO_0000010

1258780
type: Gene
SIO_000068: ncbigene

position:2971:-1
position: 2971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3351:-1
position: 3351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971-3351:-1:exon

T4p004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 60.1
locus tag: T4p004
codon start: 1
transl table: 11
product: gp60.1 hypothetical protein
translation: MTCFKNEKGEVFRLHVNDPRIKTEKLVGVGNTVAATAKAAELEKAKPWYNKSATNPEAVKLIPNLYEWYVTKYDPDHYKRTGVAKWKSVNNITVNSKLFGRAFNEFKRGWIPDEKFYEVYNEICKN
SIO_010081: T4p004
subclass of: SO_0000673
so part of: T4p004
location: complement(2971..3351)
location: region:2971-3351:-1
so has part: feature:2971-3351:-1:exon

NP_049619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2971-3351:-1:exon

T4p005
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: mobA
locus tag: T4p005
so part of: sequence
location: complement(3654..3767)
location: region:3654-3767:-1
so has part: feature:3654-3767:-1:exon
subclass of: SO_0000010

1258782
type: Gene
SIO_000068: ncbigene

position:3654:-1
position: 3654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3767:-1
position: 3767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3654-3767:-1:exon

T4p005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: mobA
locus tag: T4p005
note: defective DNA endonuclease; H-N-H family; relative of mobile endonucleases of filamentous fungi
codon start: 1
transl table: 11
product: homing endonuclease
translation: MRGKTRVSKFKGEIHHILPRSMGGSDDNENLVKHDFS
SIO_010081: T4p005
subclass of: SO_0000673
so part of: T4p005
location: complement(3654..3767)
location: region:3654-3767:-1
so has part: feature:3654-3767:-1:exon

NP_049620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3654-3767:-1:exon

T4p006
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 39
locus tag: T4p006
so part of: sequence
location: complement(3778..5328)
location: region:3778-5328:-1
so has part: feature:3778-5328:-1:exon
subclass of: SO_0000010

1258807
type: Gene
SIO_000068: ncbigene

position:3778:-1
position: 3778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5328:-1
position: 5328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3778-5328:-1:exon

T4p006
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 39
locus tag: T4p006
note: DNA-dependent ATPase, topoisomerase II in T4 and related phages an insertion splits the large Topo II subunit in two parts (gp60 and gp39); gp39; DNA-dependent ATPase; membrane associated protein; bacteriophage T4 topoisomerase II is comprised of gp39, gp52, and gp60 subunits; topisomerase II catalyzes cleavage and re-ligation of double-stranded DNA
codon start: 1
transl table: 11
product: DNA topoisomerase II large subunit
translation: MIKNEIKILSDIEHIKKRSGMYIGSSANETHERFMFGKWESVQYVPGLVKLIDEIIDNSVDEGIRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGDDKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVRCSNGMENKSWEDIPGKWKGTRVTFIPDFMSFETNELSQVYLDITLDRLQTLAVVYPDIQFTFNGKKVQGNFKKYARQYDEHAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCAMDDICEDLIPQIKRKFKIDVTKARVKECLTIVMFVRDMKNMRLIRQTKERLTSPFGEIRSHIQLDAKKISRDILNNEAILMPIIEAALARKLAAEKAAETKAAKKASKAKVHKHIKANLCGKDADTTLFLTEGDSAIGYLIDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDICAITGLVLGEKAFEEKEDGEWFTFELNGDTIIVNENDEVQINGKWITVGELRKNL
SIO_010081: T4p006
subclass of: SO_0000673
so part of: T4p006
location: complement(3778..5328)
location: region:3778-5328:-1
so has part: feature:3778-5328:-1:exon

NP_049621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3778-5328:-1:exon

T4p007
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 39.1
locus tag: T4p007
so part of: sequence
location: complement(5398..5595)
location: region:5398-5595:-1
so has part: feature:5398-5595:-1:exon
subclass of: SO_0000010

1258650
type: Gene
SIO_000068: ncbigene

position:5398:-1
position: 5398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5595:-1
position: 5595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5398-5595:-1:exon

T4p007
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 39.1
locus tag: T4p007
codon start: 1
transl table: 11
product: gp39.1 hypothetical protein
translation: MLINATKVLSSSGFTNIEITGYNWFGCSENDFQHTGFRAIGPTGQKVEGTVCSGLFFKDSTIRFK
SIO_010081: T4p007
subclass of: SO_0000673
so part of: T4p007
location: complement(5398..5595)
location: region:5398-5595:-1
so has part: feature:5398-5595:-1:exon

NP_049622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5398-5595:-1:exon

T4p008
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 39.2
locus tag: T4p008
so part of: sequence
location: complement(5702..5839)
location: region:5702-5839:-1
so has part: feature:5702-5839:-1:exon
subclass of: SO_0000010

1258588
type: Gene
SIO_000068: ncbigene

position:5702:-1
position: 5702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5839:-1
position: 5839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5702-5839:-1:exon

T4p008
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 39.2
locus tag: T4p008
codon start: 1
transl table: 11
product: FmdB-like transcriptional regulator
translation: MPLYDYKCQSKDCAKEYEKIKKISGRDTGVCPDCHRLAVRLVSAS
SIO_010081: T4p008
subclass of: SO_0000673
so part of: T4p008
location: complement(5702..5839)
location: region:5702-5839:-1
so has part: feature:5702-5839:-1:exon

NP_049623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5702-5839:-1:exon

T4p009
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: comC-alpha
alternative label: go9H
gene: goF
locus tag: T4p009
gene synonym: comC-alpha; go9H
so part of: sequence
location: complement(5842..6267)
location: region:5842-6267:-1
so has part: feature:5842-6267:-1:exon
subclass of: SO_0000010

1258632
type: Gene
SIO_000068: ncbigene

position:5842:-1
position: 5842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6267:-1
position: 6267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5842-6267:-1:exon

T4p009
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: comC-alpha
alternative label: go9H
gene: goF
locus tag: T4p009
gene synonym: comC-alpha; go9H
note: overcomes rho mutant effects
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIKFEVNKWYQFKNKQAQENFIKDHTDNGIYARRLGMEPFKILDADYLGRPTKIMTSIGVLKRCAGGDILDENFIWLSTNEAGFFDEVENPYQAVEEQEQEEKEQEQIEDFTEFPVMKVTIENNDQAWSLYQMLKAYFKE
SIO_010081: T4p009
subclass of: SO_0000673
so part of: T4p009
location: complement(5842..6267)
location: region:5842-6267:-1
so has part: feature:5842-6267:-1:exon

NP_049624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5842-6267:-1:exon

T4p010
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: comC-alpha.1
alternative label: M1
alternative label: mb
gene: cef
locus tag: T4p010
gene synonym: comC-alpha.1; M1; mb
so part of: sequence
location: complement(6267..6482)
location: region:6267-6482:-1
so has part: feature:6267-6482:-1:exon
subclass of: SO_0000010

1258628
type: Gene
SIO_000068: ncbigene

position:6482:-1
position: 6482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6267-6482:-1:exon

T4p010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: comC-alpha.1
alternative label: M1
alternative label: mb
gene: cef
locus tag: T4p010
gene synonym: comC-alpha.1; M1; mb
codon start: 1
transl table: 11
product: cef modifier of supressor tRNAs
translation: MKRKIVQNCTNDEFEDVLFDPNLVVVQKEHTSKFTHLTSVYVYEKVGDKQPIYGVFREITEDGTTYWKEIY
SIO_010081: T4p010
subclass of: SO_0000673
so part of: T4p010
location: complement(6267..6482)
location: region:6267-6482:-1
so has part: feature:6267-6482:-1:exon

NP_049625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6267-6482:-1:exon

T4p011
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dexA.-3
gene: motB
locus tag: T4p011
gene synonym: dexA.-3
so part of: sequence
location: complement(6653..7141)
location: region:6653-7141:-1
so has part: feature:6653-7141:-1:exon
subclass of: SO_0000010

1258672
type: Gene
SIO_000068: ncbigene

position:6653:-1
position: 6653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7141:-1
position: 7141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6653-7141:-1:exon

T4p011
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dexA.-3
gene: motB
locus tag: T4p011
gene synonym: dexA.-3
codon start: 1
transl table: 11
product: MotB-like transcriptional regulator
translation: MIINIGELARVSDKSRSKAAGKLVEVVSIQLKHGVKDEDSEVKVRIIPKDGKSKPQFGYVRAKFLESAFLKAVPAKGIETIDTSHVGVDFKWKLGQAIKFIAPCEFNFIKDDGRVVYTRAMCGYITDQWVEDGVKLYNVVFLGTYKVIPESWIKHYSNALYA
SIO_010081: T4p011
subclass of: SO_0000673
so part of: T4p011
location: complement(6653..7141)
location: region:6653-7141:-1
so has part: feature:6653-7141:-1:exon

NP_049626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6653-7141:-1:exon

T4p012
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dexA.-2
gene: motB.1
locus tag: T4p012
gene synonym: dexA.-2
so part of: sequence
location: complement(7291..7650)
location: region:7291-7650:-1
so has part: feature:7291-7650:-1:exon
subclass of: SO_0000010

1258611
type: Gene
SIO_000068: ncbigene

position:7291:-1
position: 7291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7650:-1
position: 7650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7291-7650:-1:exon

T4p012
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dexA.-2
gene: motB.1
locus tag: T4p012
gene synonym: dexA.-2
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKINTAYQMKKPSEIDFQTMSNTTDSKFWELLGTTGGYPFTVISVNSGILIGTVYMEIRNYYGRVSSFIIYEEDFNLLTEIEKPEDPTDLLCKAVYIRRPFANPIGGWVTDQWIGRWR
SIO_010081: T4p012
subclass of: SO_0000673
so part of: T4p012
location: complement(7291..7650)
location: region:7291-7650:-1
so has part: feature:7291-7650:-1:exon

NP_049627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7291-7650:-1:exon

T4p013
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dexA.-1
gene: motB.2
locus tag: T4p013
gene synonym: dexA.-1
so part of: sequence
location: complement(7661..8161)
location: region:7661-8161:-1
so has part: feature:7661-8161:-1:exon
subclass of: SO_0000010

1258758
type: Gene
SIO_000068: ncbigene

position:7661:-1
position: 7661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8161:-1
position: 8161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7661-8161:-1:exon

T4p013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dexA.-1
gene: motB.2
locus tag: T4p013
gene synonym: dexA.-1
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIYRVESSFSILNYEDAITIRRDLCVQITPYRSIIDSWSEEWLLHVGYDRPNFMHHSNDNKRIPVPHEDKLLVKNANIVINTKFKKDYVGVEYHIPGWFVALYHFAFASEYDMMKWFTREEREELASKGFYLAVYEVPDDQVIIGGHQVMFRKSYAELKGFITLN
SIO_010081: T4p013
subclass of: SO_0000673
so part of: T4p013
location: complement(7661..8161)
location: region:7661-8161:-1
so has part: feature:7661-8161:-1:exon

NP_049628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7661-8161:-1:exon

T4p014
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: dexA
locus tag: T4p014
so part of: sequence
location: complement(8225..8908)
location: region:8225-8908:-1
so has part: feature:8225-8908:-1:exon
subclass of: SO_0000010

1258605
type: Gene
SIO_000068: ncbigene

position:8225:-1
position: 8225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8908:-1
position: 8908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8225-8908:-1:exon

T4p014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: dexA
locus tag: T4p014
note: 3' to 5' DNA exonuclease activity involved in T4 DNA replication and host DNA degradation; DexA; DNA exonuclease A; 3' to 5' DNA exonuclease
codon start: 1
transl table: 11
product: exonuclease
translation: MFDFIIDFETMGSGEKAAVIDLAVIAFDPNPEVVETFDELVSRGIKIKFDLKSQKGHRLFTKSTIEWWKNQSPEARKNIAPSDEDVSTIDGIAKFNDYINAHNIDPWKSQGWCRGMSFDFPILVDLIRDIQRLNGVSENELDTFKLEPCKFWNQRDIRTRIEALLLVRDMTTCPLPKGTLDGFVAHDSIHDCAKDILMMKYALRYAMGLEDAPSEEECDPLSLPTKR
SIO_010081: T4p014
subclass of: SO_0000673
so part of: T4p014
location: complement(8225..8908)
location: region:8225-8908:-1
so has part: feature:8225-8908:-1:exon

NP_049629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8225-8908:-1:exon

T4p015
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: dexA.1
locus tag: T4p015
so part of: sequence
location: complement(8908..9150)
location: region:8908-9150:-1
so has part: feature:8908-9150:-1:exon
subclass of: SO_0000010

1258785
type: Gene
SIO_000068: ncbigene

position:9150:-1
position: 9150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8908-9150:-1:exon

T4p015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: dexA.1
locus tag: T4p015
codon start: 1
transl table: 11
product: DexA.1 hypothetical protein
translation: MIELSWYQFKSLMTNVKVVIQENPGPENITIREKASKIVYSLEEIQKDIESMAKFIDEPINKVYIQDYTVGQIRDLARKI
SIO_010081: T4p015
subclass of: SO_0000673
so part of: T4p015
location: complement(8908..9150)
location: region:8908-9150:-1
so has part: feature:8908-9150:-1:exon

NP_049630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8908-9150:-1:exon

T4p016
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: dexA.2
locus tag: T4p016
so part of: sequence
location: complement(9143..9388)
location: region:9143-9388:-1
so has part: feature:9143-9388:-1:exon
subclass of: SO_0000010

1258616
type: Gene
SIO_000068: ncbigene

position:9143:-1
position: 9143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9388:-1
position: 9388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9143-9388:-1:exon

T4p016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: dexA.2
locus tag: T4p016
codon start: 1
transl table: 11
product: dextranase
translation: MEITKDQFYLLQDKVSEIYEIAYSKNRETVKIESSKLMLQLEEIERDLIALEFFCGEVKTVTINDYVLGEISYLYEAIIND
SIO_010081: T4p016
subclass of: SO_0000673
so part of: T4p016
location: complement(9143..9388)
location: region:9143-9388:-1
so has part: feature:9143-9388:-1:exon

NP_049631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9143-9388:-1:exon

T4p017
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: sud
gene: dda
locus tag: T4p017
gene synonym: sud
so part of: sequence
location: complement(9410..10729)
location: region:9410-10729:-1
so has part: feature:9410-10729:-1:exon
subclass of: SO_0000010

1258784
type: Gene
SIO_000068: ncbigene

position:9410:-1
position: 9410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10729:-1
position: 10729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9410-10729:-1:exon

T4p017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: sud
gene: dda
locus tag: T4p017
gene synonym: sud
note: DNA-dependent ATPase, DNA helicase
codon start: 1
transl table: 11
product: Dda-like helicase
translation: MTFDDLTEGQKNAFNIVMKAIKEKKHHVTINGPAGTGKTTLTKFIIEALISTGGTGIILAAPTHAAKKILSKLSGKEASTIHSILKINPVTYEENVLFEQKEVPDLAKCRVLICDEVSMYDRKLFKILLSTIPPWCTIIGIGDNKQIRPVEPGENTAYISPFFTHKDFYQCELTEVKRSNAPIIDVATDVRNGKWNYDKVVDGHGVRGFTGDTALRDFMVNYFSIVKSLDDLFENRVMAFTNKSVDKLNSIIRKKIFETDKDFIVGEIIVMQEPLFKTYKIDGKPVSEIIFNNGQLVRIIEAEYTSTFVKARGVPGEYLIRHWDLTVETYGDDEYYREKIKIISSDEELYKFNLFLAKTAETYKNWNKGGKAPWSDFWDAKSQFSKVKALPASTFHKAQGMSVDRAFIYTPCIHYADVELAQQLLYVGVTRGRYDVFYV
SIO_010081: T4p017
subclass of: SO_0000673
so part of: T4p017
location: complement(9410..10729)
location: region:9410-10729:-1
so has part: feature:9410-10729:-1:exon

NP_049632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9410-10729:-1:exon

T4p018
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: dda.1
locus tag: T4p018
so part of: sequence
location: complement(10726..11037)
location: region:10726-11037:-1
so has part: feature:10726-11037:-1:exon
subclass of: SO_0000010

1258786
type: Gene
SIO_000068: ncbigene

position:10726:-1
position: 10726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11037:-1
position: 11037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10726-11037:-1:exon

T4p018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: dda.1
locus tag: T4p018
codon start: 1
transl table: 11
product: Dda.1 hypothetical protein
translation: MVYVYAIVYRDKDGFTAPVPLDEHRPAVFFEWKIADKVFTTLKEQYRLALGKGIPRLVETPRKFWFNKIEVKHVKPDVDTQRLYQRILDTGRIVSIPIAGNLR
SIO_010081: T4p018
subclass of: SO_0000673
so part of: T4p018
location: complement(10726..11037)
location: region:10726-11037:-1
so has part: feature:10726-11037:-1:exon

NP_049633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10726-11037:-1:exon

T4p019
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dda.2
gene: srd
locus tag: T4p019
gene synonym: dda.2
so part of: sequence
location: complement(11039..11785)
location: region:11039-11785:-1
so has part: feature:11039-11785:-1:exon
subclass of: SO_0000010

1258797
type: Gene
SIO_000068: ncbigene

position:11039:-1
position: 11039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11785:-1
position: 11785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11039-11785:-1:exon

T4p019
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dda.2
gene: srd
locus tag: T4p019
gene synonym: dda.2
note: postulated decoy of sigma factors RpoD and RpoS
codon start: 1
transl table: 11
product: Srd anti-sigma factor
translation: MKLSNNQIRKIKRRLEHTQASAKRRSKDFNLDFNYIKNILDQKVCAYSGEPFDNRIEGEKLSLERFDNNVGYIKGNVIAVKKKYNTFRSDYTLEELIEKRDLFALRIGRSSAKKVHKLNLDEKKWAKIKKTYNQIKAIQKKRENRIEHISQLSKSKQTSDIKLRIIALKARIDGSRIAEGAEVVKLNVLLKGSDWKIVKKLSEAEMQYDMCDKIIQGVERYQNLSFIDKLKLKRGYPLNCSIFKLIRG
SIO_010081: T4p019
subclass of: SO_0000673
so part of: T4p019
location: complement(11039..11785)
location: region:11039-11785:-1
so has part: feature:11039-11785:-1:exon

NP_049634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11039-11785:-1:exon

T4p020
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dda.3
gene: modA
locus tag: T4p020
gene synonym: dda.3
so part of: sequence
location: complement(11908..12510)
location: region:11908-12510:-1
so has part: feature:11908-12510:-1:exon
subclass of: SO_0000010

1258568
type: Gene
SIO_000068: ncbigene

position:11908:-1
position: 11908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12510:-1
position: 12510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11908-12510:-1:exon

T4p020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dda.3
gene: modA
locus tag: T4p020
gene synonym: dda.3
note: ADP-ribosylates both alpha subunits of RNA polymerase
codon start: 1
transl table: 11
product: RNA polymerase ADP-ribosylase
translation: MKYSVMQLKDFKIKSMDASVRASIREELLSEGFNLSEIELLIHCITNKPDDHSWLNEIIKSRLVPNDKPLWRGVPAETKQVLNQGIDIITFDKVVSASYDKNIALHFASGLEYNTQVIFEFKAPMVFNFQEYAIKALRCKEYNPNFKFPDSHRYRNMELVSDEQEVMIPAGSVFRIADRYEYKKCSTYTIYTLDFEGFNL
SIO_010081: T4p020
subclass of: SO_0000673
so part of: T4p020
location: complement(11908..12510)
location: region:11908-12510:-1
so has part: feature:11908-12510:-1:exon

NP_049635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11908-12510:-1:exon

T4p021
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dda.4 and dda.5
alternative label: modA.1
gene: modB
locus tag: T4p021
gene synonym: dda.4 and dda.5; modA.1
so part of: sequence
location: complement(12507..13130)
location: region:12507-13130:-1
so has part: feature:12507-13130:-1:exon
subclass of: SO_0000010

1258688
type: Gene
SIO_000068: ncbigene

position:12507:-1
position: 12507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13130:-1
position: 13130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12507-13130:-1:exon

T4p021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dda.4 and dda.5
alternative label: modA.1
gene: modB
locus tag: T4p021
gene synonym: dda.4 and dda.5; modA.1
note: ADP ribosylates ribosomal protein S1, EF-TU, trigger factor and other proteins
codon start: 1
transl table: 11
product: RNA polymerase ADP-ribosylase
translation: MIINLADVEQLSIKAESVDFQYDMYKKVCEKFTDFEQSVLWQCMEAKKNEALHKHLNEIIKKHLTKSPYQLYRGISKSTKELIKDLQVGEVFSTNRVDSFTTSLHTACSFSYAEYFTETILRLKTDKAFNYSDHISDIILSSPNTEFKYTYEDTDGLDSERTDNLMMIVREQEWMIPIGKYKITSISKEKLHDSFGTFKVYDIEVVE
SIO_010081: T4p021
subclass of: SO_0000673
so part of: T4p021
location: complement(12507..13130)
location: region:12507-13130:-1
so has part: feature:12507-13130:-1:exon

NP_049636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12507-13130:-1:exon

T4p022
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dda.6
gene: modA.2
locus tag: T4p022
gene synonym: dda.6
so part of: sequence
location: complement(13198..13380)
location: region:13198-13380:-1
so has part: feature:13198-13380:-1:exon
subclass of: SO_0000010

1258753
type: Gene
SIO_000068: ncbigene

position:13198:-1
position: 13198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13380:-1
position: 13380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13198-13380:-1:exon

T4p022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dda.6
gene: modA.2
locus tag: T4p022
gene synonym: dda.6
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLFEMLEDNHSTNNQNDSSDYKKEYRIVLQNYGIEAPDALLEELASYHLDPPPWAPWAK
SIO_010081: T4p022
subclass of: SO_0000673
so part of: T4p022
location: complement(13198..13380)
location: region:13198-13380:-1
so has part: feature:13198-13380:-1:exon

NP_049637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13198-13380:-1:exon

T4p023
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dda.7
gene: modA.3
locus tag: T4p023
gene synonym: dda.7
so part of: sequence
location: complement(13389..13859)
location: region:13389-13859:-1
so has part: feature:13389-13859:-1:exon
subclass of: SO_0000010

1258730
type: Gene
SIO_000068: ncbigene

position:13389:-1
position: 13389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13859:-1
position: 13859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13389-13859:-1:exon

T4p023
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dda.7
gene: modA.3
locus tag: T4p023
gene synonym: dda.7
codon start: 1
transl table: 11
product: Mrh transcription modulator under heat shock
translation: MIEVAKLYSIEFMSKEGKSVNTLDKNCSLIIPLAENPDFLIKDIKERKYPENIILIIKHTEDILQNTDSPFSSSEALTIKGYKRAHEYGLFDMFEDDKVKLASQPSKSKTFIIEDIKDINAFVRMVWAHFDVGLRWRMSEEERKIIETNRKFGFYR
SIO_010081: T4p023
subclass of: SO_0000673
so part of: T4p023
location: complement(13389..13859)
location: region:13389-13859:-1
so has part: feature:13389-13859:-1:exon

NP_049638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13389-13859:-1:exon

T4p024
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dda.8
gene: modA.4
locus tag: T4p024
gene synonym: dda.8
so part of: sequence
location: complement(13852..14016)
location: region:13852-14016:-1
so has part: feature:13852-14016:-1:exon
subclass of: SO_0000010

1258636
type: Gene
SIO_000068: ncbigene

position:13852:-1
position: 13852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14016:-1
position: 14016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13852-14016:-1:exon

T4p024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dda.8
gene: modA.4
locus tag: T4p024
gene synonym: dda.8
codon start: 1
transl table: 11
product: ModA.4 hypothetical protein
translation: MNKDMTLEEAKAKANEAMDLLLKIGSKMMEENEKYIQENKIPDGPLVGKRKSHD
SIO_010081: T4p024
subclass of: SO_0000673
so part of: T4p024
location: complement(13852..14016)
location: region:13852-14016:-1
so has part: feature:13852-14016:-1:exon

NP_049639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13852-14016:-1:exon

T4p025
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dda.9
alternative label: modA.5
gene: srh
locus tag: T4p025
gene synonym: dda.9; modA.5
so part of: sequence
location: complement(14013..14216)
location: region:14013-14216:-1
so has part: feature:14013-14216:-1:exon
subclass of: SO_0000010

1258592
type: Gene
SIO_000068: ncbigene

position:14013:-1
position: 14013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14216:-1
position: 14216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14013-14216:-1:exon

T4p025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dda.9
alternative label: modA.5
gene: srh
locus tag: T4p025
gene synonym: dda.9; modA.5
note: postulated decoy of host sigma 32 (RpoH)
codon start: 1
transl table: 11
product: decoy of host sigma32
translation: MKVLKKMLEWFNRPNSMYIDDGWVEQANKEMQNESEEWMKSMISAEKEKKLERSALKLMRDIYGDKS
SIO_010081: T4p025
subclass of: SO_0000673
so part of: T4p025
location: complement(14013..14216)
location: region:14013-14216:-1
so has part: feature:14013-14216:-1:exon

NP_049640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14013-14216:-1:exon

T4p026
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: mrh
locus tag: T4p026
so part of: sequence
location: complement(14191..14676)
location: region:14191-14676:-1
so has part: feature:14191-14676:-1:exon
subclass of: SO_0000010

1258731
type: Gene
SIO_000068: ncbigene

position:14191:-1
position: 14191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14676:-1
position: 14676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14191-14676:-1:exon

T4p026
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: mrh
locus tag: T4p026
note: allows growth on rpoH mutants
codon start: 1
transl table: 11
product: Mrh transcription modulator under heat shock
translation: MEAILFEMSINSISMAFVKDVPITVAVMIDKRYDNNMYLVEDFISMPIPEDVEIKLKKIGIIETVQNSPFMAIQAFTKSNYIDVAEAYYNNKPLSFYSYDSIYDWKIDKGNKFIITDESALSYFITSLWNNLNPNLLKIHKFDDAPTIVLGKTNESSEEDA
SIO_010081: T4p026
subclass of: SO_0000673
so part of: T4p026
location: complement(14191..14676)
location: region:14191-14676:-1
so has part: feature:14191-14676:-1:exon

NP_049641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14191-14676:-1:exon

T4p027
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: mrh.1
locus tag: T4p027
so part of: sequence
location: complement(14685..15026)
location: region:14685-15026:-1
so has part: feature:14685-15026:-1:exon
subclass of: SO_0000010

1258720
type: Gene
SIO_000068: ncbigene

position:14685:-1
position: 14685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15026:-1
position: 15026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14685-15026:-1:exon

T4p027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: mrh.1
locus tag: T4p027
codon start: 1
transl table: 11
product: Mrh.1 hypothetical protein
translation: MFIFNWFKSFFTDFFSTTPGEGVVPISNDYLPLTVVEYVYMGDGTVEAVTMTYEEAQEYYKNPWRWSTPTTSSNTQNTQSSSDSYDTNVPVHVWAGDSCGSSCDSSCSSTSCD
SIO_010081: T4p027
subclass of: SO_0000673
so part of: T4p027
location: complement(14685..15026)
location: region:14685-15026:-1
so has part: feature:14685-15026:-1:exon

NP_049642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14685-15026:-1:exon

T4p028
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: mrh.2
locus tag: T4p028
so part of: sequence
location: complement(15026..15232)
location: region:15026-15232:-1
so has part: feature:15026-15232:-1:exon
subclass of: SO_0000010

1258696
type: Gene
SIO_000068: ncbigene

position:15232:-1
position: 15232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15026-15232:-1:exon

T4p028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: mrh.2
locus tag: T4p028
codon start: 1
transl table: 11
product: Mrh.2 hypothetical protein
translation: MLNRWIKPNEDLDIIISRHVMKKYELQPWSTEVVVHSFMMYADGSVEFNVEIRYDYGEKQVEFKRGFL
SIO_010081: T4p028
subclass of: SO_0000673
so part of: T4p028
location: complement(15026..15232)
location: region:15026-15232:-1
so has part: feature:15026-15232:-1:exon

NP_049643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15026-15232:-1:exon

T4p029
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: soc
locus tag: T4p029
so part of: sequence
location: complement(15331..15573)
location: region:15331-15573:-1
so has part: feature:15331-15573:-1:exon
subclass of: SO_0000010

1258783
type: Gene
SIO_000068: ncbigene

position:15331:-1
position: 15331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15573:-1
position: 15573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15331-15573:-1:exon

T4p029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: soc
locus tag: T4p029
note: small outer capsid head accessory protein, found on T4 and a few related phages
codon start: 1
transl table: 11
product: virion structural protein
translation: MASTRGYVNIKTFEQKLDGNKKIEGKEISVAFPLYSDVHKISGAHYQTFPSEKAAYSTVYEENQRTEWIAANEDLWKVTG
SIO_010081: T4p029
subclass of: SO_0000673
so part of: T4p029
location: complement(15331..15573)
location: region:15331-15573:-1
so has part: feature:15331-15573:-1:exon

NP_049644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15331-15573:-1:exon

T4p030
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 69
gene: segF
locus tag: T4p030
gene synonym: 69
so part of: sequence
location: complement(15606..16280)
location: region:15606-16280:-1
so has part: feature:15606-16280:-1:exon
subclass of: SO_0000010

1258803
type: Gene
SIO_000068: ncbigene

position:15606:-1
position: 15606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16280:-1
position: 16280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15606-16280:-1:exon

T4p030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 69
gene: segF
locus tag: T4p030
gene synonym: 69
note: site-specific endonuclease; relative of mobile endonucleases of filamentous fungi; GIY-YIG family
codon start: 1
transl table: 11
product: SegF homing endonuclease
translation: MDIKQKFYRTYIVKVRTPKGVFWYAGKHESFIVNPYNDKYPGSGKILWNIYRKYGFNYKIRWSKCHGSREKSYEVERELISALKRKHPDTCINISPGGQGGEGRKWTEQQRLEHKLRLNNPETKTRMKNSQRIAQNRAERKARQSEVMKKFYSNGGNKKISEGTSRAQRKAPHWHEPLKSEIHELWVSLGKPATGPVVKALKGKYDVTSSALKNLIYLFRKEDV
SIO_010081: T4p030
subclass of: SO_0000673
so part of: T4p030
location: complement(15606..16280)
location: region:15606-16280:-1
so has part: feature:15606-16280:-1:exon

NP_049645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15606-16280:-1:exon

T4p031
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 56
locus tag: T4p031
so part of: sequence
location: complement(16270..16785)
location: region:16270-16785:-1
so has part: feature:16270-16785:-1:exon
subclass of: SO_0000010

1258544
type: Gene
SIO_000068: ncbigene

position:16270:-1
position: 16270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16785:-1
position: 16785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16270-16785:-1:exon

T4p031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 56
locus tag: T4p031
note: removes dCTP,dCDP/dUTP,dUDP from precursor pool; gp56; gp56 is a dCTPase and catalyzes coversion of dCTP to dCMP plus diphosphate; gp56 is also a dCDPase/dUTPase, dUDPase; essential for normal development of all T-even related phages; these phages use deoxy-hydroxymethyl-cytosine instead of deoxycytosine in their DNA; gp56 hydrolyzes dCTP and dCDP, preventing incoorporation into phage DNA
codon start: 1
transl table: 11
product: dUTPase
translation: MAHFNECAHLIEGVDKAQNEYWDILGDEKDPLQVMLDMQRFLQIRLANVREYCYHPDKLETAGDVVSWMREQKDCIDDEFRELLTSLGEMSRGEKEASAVWKKWKARYIEAQEKRIDEMSPEDQLEIKFELVDIFHFVLNMFVGLGMNAEEIFKLYYLKNKHNFERQDNGY
SIO_010081: T4p031
subclass of: SO_0000673
so part of: T4p031
location: complement(16270..16785)
location: region:16270-16785:-1
so has part: feature:16270-16785:-1:exon

NP_049646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16270-16785:-1:exon

T4p031
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 2681598
gene: 56
locus tag: T4p031
note: DNA replication origin oriA; (-) strand direction; primer RNA same as transcript for genes 56, segF and 59; effective origin placed at 50 bases from start of middle transcript from promoter Pm16813
SIO_010081: T4p031
subclass of: SO_0000673
so part of: T4p031
location: complement(16763)
location: region:16763-16763:-1
so has part: feature:16763-16763:-1:exon

position:16763:-1
position: 16763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16763-16763:-1:exon

T4p032
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: dam
locus tag: T4p032
so part of: sequence
location: complement(16846..17625)
location: region:16846-17625:-1
so has part: feature:16846-17625:-1:exon
subclass of: SO_0000010

1258548
type: Gene
SIO_000068: ncbigene

position:16846:-1
position: 16846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17625:-1
position: 17625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16846-17625:-1:exon

T4p032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: dam
locus tag: T4p032
note: produces N6-methyladenine in GATC sites (in modified or non-modified cytosine DNA)
codon start: 1
transl table: 11
product: Dam family site-specific DNA-(adenine-N6)-methyltransferase
translation: MLGAIAYTGNKQSLLPELKSHFPKYNRFVDLFCGGLSVSLNVNGPVLANDIQEPIIEMYKRLINVSWDDVLKVIKQYKLSKTSKEEFLKLREDYNKTRDPLLLYVLHFHGFSNMIRINDKGNFTTPFGKRTINKNSEKQYNHFKQNCDKIIFSSLHFKDVKILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGQSNVLEHHGKENTLLKEWSKKYNVKHLNKKYVFNIYHSKEKNGTDEVYIFN
SIO_010081: T4p032
subclass of: SO_0000673
so part of: T4p032
location: complement(16846..17625)
location: region:16846-17625:-1
so has part: feature:16846-17625:-1:exon

NP_049647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16846-17625:-1:exon

T4p033
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 61
locus tag: T4p033
so part of: sequence
location: complement(17935..18963)
location: region:17935-18963:-1
so has part: feature:17935-18963:-1:exon
subclass of: SO_0000010

1258798
type: Gene
SIO_000068: ncbigene

position:17935:-1
position: 17935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18963:-1
position: 18963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17935-18963:-1:exon

T4p033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 61
locus tag: T4p033
note: DNA replication primase; gp61; requires interaction with gp41 helicase to synthesize RNA primers at unique template sequemces; primes lagging-strand DNA synthesis
codon start: 1
transl table: 11
product: DNA primase
translation: MSSIPWIDNEFAYRALAHLPKFTQVNNSSTFKLRFRCPVCGDSKTDQNKARGWYYGDNNEGNIHCYNCNYHAPIGIYLKEFEPDLYREYIFEIRKEKGKSRPIEKPKELPKQPEKKIIKSLPSCVRLDKLAEDHPIIKYVKARCIPKDKWKYLWFTTEWPKLVNSIAPGTYKKEISEPRLVIPIYNANGKAESFQGRALKKDAPQKYITIEAYPEATKIYGVERVKDGDVYVLEGPIDSLFIENGIAITGGQLDLEVVPFKDRRVWVLDNEPRHPDTIKRMTKLVDAGERVMFWDKSPWKSKDVNDMIRKEGATPEQIMEYMKNNIAQGLMAKMRLSKYAKI
SIO_010081: T4p033
subclass of: SO_0000673
so part of: T4p033
location: complement(17935..18963)
location: region:17935-18963:-1
so has part: feature:17935-18963:-1:exon

NP_049648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17935-18963:-1:exon

T4p034
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 61.1
locus tag: T4p034
so part of: sequence
location: complement(18966..19130)
location: region:18966-19130:-1
so has part: feature:18966-19130:-1:exon
subclass of: SO_0000010

1258567
type: Gene
SIO_000068: ncbigene

position:18966:-1
position: 18966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19130:-1
position: 19130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18966-19130:-1:exon

T4p034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 61.1
locus tag: T4p034
codon start: 1
transl table: 11
product: gp61.1 hypothetical protein
translation: MKTFKEFIKEDMVAGDSGGNPENISIGTTSGAVVNKGPEQIPKKKKEESKEKEE
SIO_010081: T4p034
subclass of: SO_0000673
so part of: T4p034
location: complement(18966..19130)
location: region:18966-19130:-1
so has part: feature:18966-19130:-1:exon

NP_049649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18966-19130:-1:exon

T4p035
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 61.2
locus tag: T4p035
so part of: sequence
location: complement(19132..19758)
location: region:19132-19758:-1
so has part: feature:19132-19758:-1:exon
subclass of: SO_0000010

1258555
type: Gene
SIO_000068: ncbigene

position:19132:-1
position: 19132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19758:-1
position: 19758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19132-19758:-1:exon

T4p035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 61.2
locus tag: T4p035
codon start: 1
transl table: 11
product: gp61.2 hypothetical protein
translation: MLYQMHKCKDTYKYKGAQCYIINRENAGPGHSHQSRFVFVKNNEIIAVANYMLVTNDVNPVLFTYDNLMDLAYDYNWFNHDNLVHIEGVGFDISYSSYSLCPMSRAHKEPEYFSFRRRVDFKRSTEYVGGIFVKDNRITRIIYPLGFGQKDIDVDLDFTENIINHIASVYFDIDHKIVICGYELPSEKQPKVNVSIDDQIFNAFMNRG
SIO_010081: T4p035
subclass of: SO_0000673
so part of: T4p035
location: complement(19132..19758)
location: region:19132-19758:-1
so has part: feature:19132-19758:-1:exon

NP_049650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19132-19758:-1:exon

T4p036
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 61.3
alternative label: rIV
gene: sp
locus tag: T4p036
gene synonym: 61.3; rIV
so part of: sequence
location: complement(19758..20051)
location: region:19758-20051:-1
so has part: feature:19758-20051:-1:exon
subclass of: SO_0000010

1258657
type: Gene
SIO_000068: ncbigene

position:20051:-1
position: 20051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19758-20051:-1:exon

T4p036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 61.3
alternative label: rIV
gene: sp
locus tag: T4p036
gene synonym: 61.3; rIV
note: mutants give rapid lysis and allow survival of lysozyme mutants
codon start: 1
transl table: 11
product: spackle periplasmic
translation: MKKFIFATIFALASCAAQPAMAGYDKDLCEWSMTADQTEVETQIEADIMNIVKRDRPEMKAEVQKQLKSGGVMQYNYVLYCDKNFNNKNIIAEVVGE
SIO_010081: T4p036
subclass of: SO_0000673
so part of: T4p036
location: complement(19758..20051)
location: region:19758-20051:-1
so has part: feature:19758-20051:-1:exon

NP_049651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19758-20051:-1:exon

T4p037
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 61.4
locus tag: T4p037
so part of: sequence
location: complement(20112..20369)
location: region:20112-20369:-1
so has part: feature:20112-20369:-1:exon
subclass of: SO_0000010

1258667
type: Gene
SIO_000068: ncbigene

position:20112:-1
position: 20112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20369:-1
position: 20369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20112-20369:-1:exon

T4p037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 61.4
locus tag: T4p037
codon start: 1
transl table: 11
product: gp61.4 hypothetical protein
translation: MHIVLFKPTPYNVRKNTQFKALIADTWELVLDIPAEESPPFGRVEFIKFAVRPTKRQIRQCKRYFRKIVKLEKQFVTCDYAEILK
SIO_010081: T4p037
subclass of: SO_0000673
so part of: T4p037
location: complement(20112..20369)
location: region:20112-20369:-1
so has part: feature:20112-20369:-1:exon

NP_049652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20112-20369:-1:exon

T4p038
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 61.5
gene: dmd
locus tag: T4p038
gene synonym: 61.5
so part of: sequence
location: complement(20371..20553)
location: region:20371-20553:-1
so has part: feature:20371-20553:-1:exon
subclass of: SO_0000010

1258668
type: Gene
SIO_000068: ncbigene

position:20371:-1
position: 20371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20553:-1
position: 20553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20371-20553:-1:exon

T4p038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 61.5
gene: dmd
locus tag: T4p038
gene synonym: 61.5
note: mutants show destabilization of T4 mRNAs
codon start: 1
transl table: 11
product: Dmd discriminator of mRNA degradation
translation: MELVKVVFMGWFKNESMFTKEITMMKDDVQWATTQYAEVNKALVKAFIDDKKVCEVDCRG
SIO_010081: T4p038
subclass of: SO_0000673
so part of: T4p038
location: complement(20371..20553)
location: region:20371-20553:-1
so has part: feature:20371-20553:-1:exon

NP_049653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20371-20553:-1:exon

T4p039
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 41
locus tag: T4p039
so part of: sequence
location: complement(20612..22039)
location: region:20612-22039:-1
so has part: feature:20612-22039:-1:exon
subclass of: SO_0000010

1258700
type: Gene
SIO_000068: ncbigene

position:20612:-1
position: 20612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22039:-1
position: 22039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20612-22039:-1:exon

T4p039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 41
locus tag: T4p039
note: DNA primase-helicase ATPase, dATPase, GTPase, dGTPase for replication and recombination; gp41; replicative DNA helicase; ATPase; functional hexamer; forms helicase-primase complex with gp61; required for lagging strand DNA synthesis and processive leading strand DNA synthesis
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MVEIILSHLIFDQAYFSKVWPYMDSEYFESGPAKNTFKLIKSHVNEYHSVPSINALNVALENSSFTETEYSGVKTLISKLADSPEDHSWLVKETEKYVQQRAMFNATSKIIEIQTNAELPPEKRNKKMPDVGAIPDIMRQALSISFDSYVGHDWMDDYEARWLSYMNKARKVPFKLRILNKITKGGAETGTLNVLMAGVNVGKSLGLCSLAADYLQLGHNVLYISMEMAEEVCAKRIDANMLDVSLDDIDDGHISYAEYKGKMEKWREKSTLGRLIVKQYPTGGADANTFRSLLNELKLKKNFVPTIIIVDYLGICKSCRIRVYSENSYTTVKAIAEELRALAVETETVLWTAAQVGKQAWDSSDVNMSDIAESAGLPATADFMLAVIETEELAAAEQQLIKQIKSRYGDKNKWNKFLMGVQKGNQKWVEIEQDSTPTEVNEVAGSQQIQAEQNRYQRNESTRAQLDALANELKF
SIO_010081: T4p039
subclass of: SO_0000673
so part of: T4p039
location: complement(20612..22039)
location: region:20612-22039:-1
so has part: feature:20612-22039:-1:exon

NP_049654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20612-22039:-1:exon

T4p040
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 40
locus tag: T4p040
so part of: sequence
location: complement(22049..22393)
location: region:22049-22393:-1
so has part: feature:22049-22393:-1:exon
subclass of: SO_0000010

1258725
type: Gene
SIO_000068: ncbigene

position:22049:-1
position: 22049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22393:-1
position: 22393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22049-22393:-1:exon

T4p040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 40
locus tag: T4p040
note: membrane-associated initiator of head vertex assembly; misidentified as spackle gene
codon start: 1
transl table: 11
product: head vertex assembly chaperone
translation: MNKDDLDLDLEIIDESPSSEGEEERKERLFNESLKIIKSAMENVIQEIVIKLEDGSTHIVYVTKLDWVDGKVVMDFAVLDQERKAELAPHVEKCITMQLQDAFNKRSKKKFKFF
SIO_010081: T4p040
subclass of: SO_0000673
so part of: T4p040
location: complement(22049..22393)
location: region:22049-22393:-1
so has part: feature:22049-22393:-1:exon

NP_049655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22049-22393:-1:exon

T4p041
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: fdsA
gene: uvsX
locus tag: T4p041
gene synonym: fdsA
so part of: sequence
location: complement(22386..23561)
location: region:22386-23561:-1
so has part: feature:22386-23561:-1:exon
subclass of: SO_0000010

1258704
type: Gene
SIO_000068: ncbigene

position:22386:-1
position: 22386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23561:-1
position: 23561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22386-23561:-1:exon

T4p041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: fdsA
gene: uvsX
locus tag: T4p041
gene synonym: fdsA
note: RecA-like recombination protein, DNA-dependent ATPase
codon start: 1
transl table: 11
product: recombinase
translation: MSDLKSRLIKASTSKLTAELTASKFFNEKDVVRTKIPMMNIALSGEITGGMQSGLLILAGPSKSFKSNFGLTMVSSYMRQYPDAVCLFYDSEFGITPAYLRSMGVDPERVIHTPVQSLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHTYETQEMFSKTVMGGGTGPMYSADTVFIIGKRQIKDGSDLQGYQFVLNVEKSRTVKEKSKFFIDVKFDGGIDPYSGLLDMALELGFVVKPKNGWYAREFLDEETGEMIREEKSWRAKDTNCTTFWGPLFKHQPFRDAIKRAYQLGAIDSNEIVEAEVDELINSKVEKFKSPESKSKSAADLETDLEQLSDMEEFNE
SIO_010081: T4p041
subclass of: SO_0000673
so part of: T4p041
location: complement(22386..23561)
location: region:22386-23561:-1
so has part: feature:22386-23561:-1:exon

NP_049656.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22386-23561:-1:exon

T4p042
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: uvsX.1
gene: segA
locus tag: T4p042
gene synonym: uvsX.1
so part of: sequence
location: complement(23570..24235)
location: region:23570-24235:-1
so has part: feature:23570-24235:-1:exon
subclass of: SO_0000010

1258777
type: Gene
SIO_000068: ncbigene

position:23570:-1
position: 23570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24235:-1
position: 24235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23570-24235:-1:exon

T4p042
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: uvsX.1
gene: segA
locus tag: T4p042
gene synonym: uvsX.1
note: site-specific homing endonuclease; GIY-YIG family
codon start: 1
transl table: 11
product: homing endonuclease
translation: MKRHKEKKYNYTYVITNLVNNKIYYGTHSTDDLNDGYMGSGTLLAQAKKKYGKKNFNLSILGFYKDFKSARDAERELVTIDVVNDPMTYNLKIGGEGGRRIGYRVSSETKEKISKAQKGKPKHLGFSDVCRKAQLGKKQSEETKAKRKEALLNNPYGYNRNKPSHKRDPIMWDNIEKIKEIWENSGKSGAIKLKKLAIEAGFPNKSYARMLEVFRGTRTLL
SIO_010081: T4p042
subclass of: SO_0000673
so part of: T4p042
location: complement(23570..24235)
location: region:23570-24235:-1
so has part: feature:23570-24235:-1:exon

NP_049657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23570-24235:-1:exon

T4p043
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: b-gt
locus tag: T4p043
so part of: sequence
location: complement(24400..25455)
location: region:24400-25455:-1
so has part: feature:24400-25455:-1:exon
subclass of: SO_0000010

1258765
type: Gene
SIO_000068: ncbigene

position:24400:-1
position: 24400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25455:-1
position: 25455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24400-25455:-1:exon

T4p043
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: b-gt
locus tag: T4p043
note: adds a glucose in beta linkage to hydroxymethylcytosine residues in phage DNA
codon start: 1
transl table: 11
product: beta-glucosyltransferase
translation: MKIAIINMGNNVINFKTVPSSETIYLFKVISEMGLNVDIISLKNGVYTKSFDEVDVNDYDRLIVVNSSINFFGGKPNLAILSAQKFMAKYKSKIYYLFTDIRLPFSQSWPNVKNRPWAYLYTEEELLIKSPIKVISQGINLDIAKAAHKKVDNVIEFEYFPIEQYKIHMNDFQLSKPTKKTLDVIYGGSFRSGQRESKMVEFLFDTGLNIEFFGNAREKQFKNPKYPWTKAPVFTGKIPMNMVSEKNSQAIAALIIGDKNYNDNFITLRVWETMASDAVMLIDEEFDTKHRIINDARFYVNNRAELIDRVNELKHSDVLRKEMLSIQHDILNKTRAKKAEWQDAFKKAIDL
SIO_010081: T4p043
subclass of: SO_0000673
so part of: T4p043
location: complement(24400..25455)
location: region:24400-25455:-1
so has part: feature:24400-25455:-1:exon

NP_049658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24400-25455:-1:exon

T4p044
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 42
locus tag: T4p044
so part of: sequence
location: complement(25479..26219)
location: region:25479-26219:-1
so has part: feature:25479-26219:-1:exon
subclass of: SO_0000010

1258746
type: Gene
SIO_000068: ncbigene

position:25479:-1
position: 25479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26219:-1
position: 26219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25479-26219:-1:exon

T4p044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 42
locus tag: T4p044
note: dCMP hydroxymethylase for producing modified hydroxymethylcytosine in T4 DNA
codon start: 1
transl table: 11
product: thymidylate synthase
translation: MISDSMTVEEIRLHLGLALKEKDFVVDKTGVKTIEIIGASFVADEPFIFGALNDEYIQRELEWYKSKSLFVKDIPGETPKIWQQVASSKGEINSNYGWAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQFDYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNAGDSTRQYKAGSIIWNVGSLHVYSRHFYLVDHWWKTGETHISKKDYVGKYA
SIO_010081: T4p044
subclass of: SO_0000673
so part of: T4p044
location: complement(25479..26219)
location: region:25479-26219:-1
so has part: feature:25479-26219:-1:exon

NP_049659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25479-26219:-1:exon

T4p045
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: imm
locus tag: T4p045
so part of: sequence
location: complement(26373..26624)
location: region:26373-26624:-1
so has part: feature:26373-26624:-1:exon
subclass of: SO_0000010

1258553
type: Gene
SIO_000068: ncbigene

position:26373:-1
position: 26373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26624:-1
position: 26624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26373-26624:-1:exon

T4p045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: imm
locus tag: T4p045
note: mediates a membrane change such that the DNA of superinfecting phage is left in the periplasm to be degraded rather than entering the host cell
codon start: 1
transl table: 11
product: immunity to superinfection
translation: METLVAGSIFMVLVSGVLAIIIYMLPWFIALMRGSKSTVGIFFASLLFNWSIIGWFITFIWSIAGETKKSAQPNQVIIIREKE
SIO_010081: T4p045
subclass of: SO_0000673
so part of: T4p045
location: complement(26373..26624)
location: region:26373-26624:-1
so has part: feature:26373-26624:-1:exon

NP_049660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26373-26624:-1:exon

T4p046
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: imm.1
locus tag: T4p046
so part of: sequence
location: complement(26636..27013)
location: region:26636-27013:-1
so has part: feature:26636-27013:-1:exon
subclass of: SO_0000010

1258538
type: Gene
SIO_000068: ncbigene

position:26636:-1
position: 26636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27013:-1
position: 27013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26636-27013:-1:exon

T4p046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: imm.1
locus tag: T4p046
codon start: 1
transl table: 11
product: iduronate sulfatase
translation: MKIAILVIALGLAGCVAQGPVVNQSDVGKIVNCSSKFYNPNVKCYKEAPKQTVEQMQANFDEAIRPDESAQAYRNSDVITREEKIENYCAELWANWANNYQWRTGKNAPMEYVVNSYNSCVKNLT
SIO_010081: T4p046
subclass of: SO_0000673
so part of: T4p046
location: complement(26636..27013)
location: region:26636-27013:-1
so has part: feature:26636-27013:-1:exon

NP_049661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26636-27013:-1:exon

T4p047
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 43
locus tag: T4p047
so part of: sequence
location: complement(27197..29893)
location: region:27197-29893:-1
so has part: feature:27197-29893:-1:exon
subclass of: SO_0000010

1258685
type: Gene
SIO_000068: ncbigene

position:27197:-1
position: 27197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29893:-1
position: 29893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27197-29893:-1:exon

T4p047
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 43
locus tag: T4p047
note: core DNA polymerase of T4 replisome, 3'-5' exonuclease; possesses DNA synthesis, 3' to 5' exonuclease (ssDNA), dNTP binding, and DNA binding activities; belongs to the DNA polymerase type-B family
codon start: 1
transl table: 11
product: DNA polymerase
translation: MKEFYISIETVGNNIVERYIDENGKERTREVEYLPTMFRHCKEESKYKDIYGKNCAPQKFPSMKDARDWMKRMEDIGLEALGMNDFKLAYISDTYGSEIVYDRKFVRVANCDIEVTGDKFPDPMKAEYEIDAITHYDSIDDRFYVFDLLNSMYGSVSKWDAKLAAKLDCEGGDEVPQEILDRVIYMPFDNERDMLMEYINLWEQKRPAIFTGWNIEGFDVPYIMNRVKMILGERSMKRFSPIGRVKSKLIQNMYGSKEIYSIDGVSILDYLDLYKKFAFTNLPSFSLESVAQHETKKGKLPYDGPINKLRETNHQRYISYNIIDVESVQAIDKIRGFIDLVLSMSYYAKMPFSGVMSPIKTWDAIIFNSLKGEHKVIPQQGSHVKQSFPGAFVFEPKPIARRYIMSFDLTSLYPSIIRQVNISPETIRGQFKVHPIHEYIAGTAPKPSDEYSCSPNGWMYDKHQEGIIPKEIAKVFFQRKDWKKKMFAEEMNAEAIKKIIMKGAGSCSTKPEVERYVKFSDDFLNELSNYTESVLNSLIEECEKAATLANTNQLNRKILINSLYGALGNIHFRYYDLRNATAITIFGQVGIQWIARKINEYLNKVCGTNDEDFIAAGDTDSVYVCVDKVIEKVGLDRFKEQNDLVEFMNQFGKKKMEPMIDVAYRELCDYMNNREHLMHMDREAISCPPLGSKGVGGFWKAKKRYALNVYDMEDKRFAEPHLKIMGMETQQSSTPKAVQEALEESIRRILQEGEESVQEYYKNFEKEYRQLDYKVIAEVKTANDIAKYDDKGWPGFKCPFHIRGVLTYRRAVSGLGVAPILDGNKVMVLPLREGNPFGDKCIAWPSGTELPKEIRSDVLSWIDHSTLFQKSFVKPLAGMCESAGMDYEEKASLDFLFG
SIO_010081: T4p047
subclass of: SO_0000673
so part of: T4p047
location: complement(27197..29893)
location: region:27197-29893:-1
so has part: feature:27197-29893:-1:exon

NP_049662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27197-29893:-1:exon

T4p048
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: regA
locus tag: T4p048
so part of: sequence
location: complement(29972..30340)
location: region:29972-30340:-1
so has part: feature:29972-30340:-1:exon
subclass of: SO_0000010

1258694
type: Gene
SIO_000068: ncbigene

position:29972:-1
position: 29972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30340:-1
position: 30340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29972-30340:-1:exon

T4p048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: regA
locus tag: T4p048
note: regulates translation of mRNAs for DNA replication proteins and other early gene products; RegA; binds mRNA and represses translation
codon start: 1
transl table: 11
product: translation repressor
translation: MIEITLKKPEDFLKVKETLTRMGIANNKDKVLYQSCHILQKKGLYYIVHFKEMLRMDGRQVEMTEEDEVRRDSIAWLLEDWGLIEIVPGQRTFMKDLTNNFRVISFKQKHEWKLVPKYTIGN
SIO_010081: T4p048
subclass of: SO_0000673
so part of: T4p048
location: complement(29972..30340)
location: region:29972-30340:-1
so has part: feature:29972-30340:-1:exon

NP_049663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29972-30340:-1:exon

T4p049
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 62
locus tag: T4p049
so part of: sequence
location: complement(30342..30905)
location: region:30342-30905:-1
so has part: feature:30342-30905:-1:exon
subclass of: SO_0000010

1258559
type: Gene
SIO_000068: ncbigene

position:30342:-1
position: 30342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30905:-1
position: 30905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30342-30905:-1:exon

T4p049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 62
locus tag: T4p049
note: gp62; clamp loader is formed by heterodimer of gp44 and gp62; clamp loader forms a complex with gp45 (clamp) in the presence of ATP and loads clamp on DNA; clamp loader is necessary for T4 DNA synthesis and late transcription
codon start: 1
transl table: 11
product: clamp loader of DNA polymerase
translation: MSLFKDDIQLNEHQVAWYSKDWTAVQSAADSFKEKAENEFFEIIGAINNKTKCSIAQKDYSKFMVENALSQFPECMPAVYAMNLIGSGLSDEAHFNYLMAAVPRGKRYGKWAKLVEDSTEVLIIKLLAKRYQVNTNDAINYKSILTKNGKLPLVLKELKGLVTDDFLKEVTKNVKEQKQLKKLALEW
SIO_010081: T4p049
subclass of: SO_0000673
so part of: T4p049
location: complement(30342..30905)
location: region:30342-30905:-1
so has part: feature:30342-30905:-1:exon

NP_049664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30342-30905:-1:exon

T4p050
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 44
locus tag: T4p050
so part of: sequence
location: complement(30907..31866)
location: region:30907-31866:-1
so has part: feature:30907-31866:-1:exon
subclass of: SO_0000010

1258787
type: Gene
SIO_000068: ncbigene

position:30907:-1
position: 30907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31866:-1
position: 31866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30907-31866:-1:exon

T4p050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 44
locus tag: T4p050
note: gp44; DNA polymerase accessory protein; forms complex with gp62 to load gp45 sliding clamp; necessary for DNA synthesis; possesses DNA-dependent ATPase activity
codon start: 1
transl table: 11
product: clamp loader of DNA polymerase
translation: MITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
SIO_010081: T4p050
subclass of: SO_0000673
so part of: T4p050
location: complement(30907..31866)
location: region:30907-31866:-1
so has part: feature:30907-31866:-1:exon

NP_049665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30907-31866:-1:exon

T4p051
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 45
locus tag: T4p051
so part of: sequence
location: complement(31917..32603)
location: region:31917-32603:-1
so has part: feature:31917-32603:-1:exon
subclass of: SO_0000010

1258821
type: Gene
SIO_000068: ncbigene

position:31917:-1
position: 31917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32603:-1
position: 32603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31917-32603:-1:exon

T4p051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 45
locus tag: T4p051
note: gp45 also is required for synthesis of late RNA, acting as a 'mobile enhancer' and in effect taking the place of a -35 region for the T4 sigma factor responsible for late transcription; gp45; DNA replication processivity factor; DNA polymerase accessory factor; forms homotrimer; tethers catalytic subunit of DNA polymerase to DNA during replication; transcription factor; necessary for T4 'late' transcription
codon start: 1
transl table: 11
product: DNA polymerase processivity factor
translation: MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDF
SIO_010081: T4p051
subclass of: SO_0000673
so part of: T4p051
location: complement(31917..32603)
location: region:31917-32603:-1
so has part: feature:31917-32603:-1:exon

NP_049666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31917-32603:-1:exon

T4p052
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 45.1
gene: rpbA
locus tag: T4p052
gene synonym: 45.1
so part of: sequence
location: complement(32659..33048)
location: region:32659-33048:-1
so has part: feature:32659-33048:-1:exon
subclass of: SO_0000010

1258752
type: Gene
SIO_000068: ncbigene

position:32659:-1
position: 32659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33048:-1
position: 33048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32659-33048:-1:exon

T4p052
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 45.1
gene: rpbA
locus tag: T4p052
gene synonym: 45.1
codon start: 1
transl table: 11
product: RNA polymerase binding
translation: MTKITVNYTVDVKDIQPKHVRSESNPQNQNKIRRAWVLSLSDNAMEVIQNKIKSAPARHAYYEAIDREVSNKWIELMRKHTTESLNAGAKFIMTSCGERLEDDYCGNADERLIVAAQIVAETIAADFNR
SIO_010081: T4p052
subclass of: SO_0000673
so part of: T4p052
location: complement(32659..33048)
location: region:32659-33048:-1
so has part: feature:32659-33048:-1:exon

NP_049667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32659-33048:-1:exon

T4p053
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 45.2
locus tag: T4p053
so part of: sequence
location: complement(33058..33246)
location: region:33058-33246:-1
so has part: feature:33058-33246:-1:exon
subclass of: SO_0000010

1258576
type: Gene
SIO_000068: ncbigene

position:33058:-1
position: 33058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33246:-1
position: 33246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33058-33246:-1:exon

T4p053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 45.2
locus tag: T4p053
codon start: 1
transl table: 11
product: protein GP45.2
translation: MEYSTGQHLLTIPEIKRYILRNNFSNEEHIVTESMLRNAFKAEYTKIMSNRNEAWTVTDYYD
SIO_010081: T4p053
subclass of: SO_0000673
so part of: T4p053
location: complement(33058..33246)
location: region:33058-33246:-1
so has part: feature:33058-33246:-1:exon

NP_049668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33058-33246:-1:exon

T4p054
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 46
locus tag: T4p054
so part of: sequence
location: complement(33302..34984)
location: region:33302-34984:-1
so has part: feature:33302-34984:-1:exon
subclass of: SO_0000010

1258822
type: Gene
SIO_000068: ncbigene

position:33302:-1
position: 33302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34984:-1
position: 34984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33302-34984:-1:exon

T4p054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 46
locus tag: T4p054
note: gp46/gp47 subunit required for recombination and host-DNA degradation; gp46; forms functional complex with gp47; homologous to E. coli SbcBC and RecBC proteins and eukaryotic Mre11-Rad50 complex; involved in DNA recombination, replication, and repair; degrades host DNA
codon start: 1
transl table: 11
product: SbcC-like subunit of palindrome specific endonuclease
translation: MKNFKLNRVKYKNIMSVGQNGIDIQLDKVQKTLITGRNGGGKSTMLEAITFGLFGKPFRDVKKGQLINSTNKKELLVELWMEYDEKKYYIKRGQKPNVFEITVNGTRLNESASSKDFQAEFEQLIGMSYASFKQIVVLGTAGYTPFMGLSTPARRKLVEDLLEVGTLAEMDKLNKALIRELNSQNQVLDVKKDSIIQQIKIYNDNVERQKKLTGDNLTRLQNMYDDLAKEARTLKSEIEEANERLVNIVLDEDPTDAFNKIGQEAFLIKSKIDSYNKVINMYHEGGLCPTCLSQLSSGDKVVSKIKDKVSECTHSFEQLSTHRDNLKVLVDEYRDNIKTQQSLANDIRNKKQSLIAAVDKAKKVKAAIEKASSEFIDHADEIALLQEELDKIVKTKTNLVMEKYHRGILTDMLKDSGIKGAIIKKYIPLFNKQINHYLKIMEADYVFTLDEEFNETIKSRGREDFSYASFSEGEKARIDIALLFTWRDIASIVSGVSISTLILDEVFDGSFDAEGIKGVANIINSMKNTNVFIISHKDHDPQEYGQHLQMKKVGRFTVMV
SIO_010081: T4p054
subclass of: SO_0000673
so part of: T4p054
location: complement(33302..34984)
location: region:33302-34984:-1
so has part: feature:33302-34984:-1:exon

NP_049669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33302-34984:-1:exon

T4p055
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 46.1
locus tag: T4p055
so part of: sequence
location: complement(34981..35187)
location: region:34981-35187:-1
so has part: feature:34981-35187:-1:exon
subclass of: SO_0000010

1258639
type: Gene
SIO_000068: ncbigene

position:34981:-1
position: 34981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35187:-1
position: 35187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34981-35187:-1:exon

T4p055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 46.1
locus tag: T4p055
codon start: 1
transl table: 11
product: DUF5487 family protein
translation: MKFSTFDINDEFIANIDYTEEDSRYVGIIYITSKTAQGVVCMAEFDEYFLDYDDMIEWSKRYIKRNLL
SIO_010081: T4p055
subclass of: SO_0000673
so part of: T4p055
location: complement(34981..35187)
location: region:34981-35187:-1
so has part: feature:34981-35187:-1:exon

NP_049670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34981-35187:-1:exon

T4p056
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 46.2
locus tag: T4p056
so part of: sequence
location: complement(35168..35431)
location: region:35168-35431:-1
so has part: feature:35168-35431:-1:exon
subclass of: SO_0000010

1258612
type: Gene
SIO_000068: ncbigene

position:35168:-1
position: 35168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35431:-1
position: 35431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35168-35431:-1:exon

T4p056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 46.2
locus tag: T4p056
codon start: 1
transl table: 11
product: gp46.2 hypothetical protein
translation: MTFDEFKNVMMSQHFKCEVKDDIGHKEIIEYWFEPLEVEDNCIKKVTVCTDWAVSFNFNILDNDTPKSLRDMAVSCIKDAYCEVFDI
SIO_010081: T4p056
subclass of: SO_0000673
so part of: T4p056
location: complement(35168..35431)
location: region:35168-35431:-1
so has part: feature:35168-35431:-1:exon

NP_049671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35168-35431:-1:exon

T4p057
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 47
locus tag: T4p057
so part of: sequence
location: complement(35428..36447)
location: region:35428-36447:-1
so has part: feature:35428-36447:-1:exon
subclass of: SO_0000010

1258781
type: Gene
SIO_000068: ncbigene

position:35428:-1
position: 35428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36447:-1
position: 36447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35428-36447:-1:exon

T4p057
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 47
locus tag: T4p057
note: gp46/gp47 subunit required for recombination and host-DNA degradation; gp47; forms functional complex with gp46; homologous to E. coli SbcBC and RecBC proteins and eukaryotic Mre11-Rad50 complex; involved in DNA recombination, replication, and repair; degrades host DNA
codon start: 1
transl table: 11
product: SbcD-like subunit of palindrome specific endonuclease
translation: MKILNLGDWHLGVKADDEWIRGIQIDGIKQAIEYSKKNGITTWIQYGDIFDVRKAITHKTMEFAREIVQTLDDAGITLHTIVGNHDLHYKNVMHPNASTELLAKYPNVKVYDKPTTVDFDGCLIDLIPWMCEENTGEILEHIKTSSASFCVGHWELNGFYFYKGMKSHGLEPDFLKTYKEVWSGHFHTISEAANVRYIGTPWTLTAGDENDPRGFWMFDTETERTEFIPNNTTWHRRIHYPFKGKIDYKDFTNLSVRVIVTEVDKNLTKFESELEKVVHSLRVVSKIDNSVESDDSEEVEVQSLQTLMEEYINAIPDITDSDREALIQYANQLYVEATQ
SIO_010081: T4p057
subclass of: SO_0000673
so part of: T4p057
location: complement(35428..36447)
location: region:35428-36447:-1
so has part: feature:35428-36447:-1:exon

NP_049672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35428-36447:-1:exon

T4p058
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 47.1
locus tag: T4p058
so part of: sequence
location: complement(36444..36584)
location: region:36444-36584:-1
so has part: feature:36444-36584:-1:exon
subclass of: SO_0000010

1258732
type: Gene
SIO_000068: ncbigene

position:36444:-1
position: 36444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36584:-1
position: 36584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36444-36584:-1:exon

T4p058
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 47.1
locus tag: T4p058
codon start: 1
transl table: 11
product: gp47.1 hypothetical predicted membrane protein
translation: MIFLGYVILFLAFYLFTRACWIGFFSTPDGFISIILFCISMTVLDI
SIO_010081: T4p058
subclass of: SO_0000673
so part of: T4p058
location: complement(36444..36584)
location: region:36444-36584:-1
so has part: feature:36444-36584:-1:exon

NP_813808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36444-36584:-1:exon

T4p059
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: a-gt
locus tag: T4p059
so part of: sequence
location: complement(36624..37826)
location: region:36624-37826:-1
so has part: feature:36624-37826:-1:exon
subclass of: SO_0000010

1258823
type: Gene
SIO_000068: ncbigene

position:36624:-1
position: 36624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37826:-1
position: 37826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36624-37826:-1:exon

T4p059
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: a-gt
locus tag: T4p059
note: adds a glucose in alpha linkage to hydroxymethylcytosine residues in T4 DNA
codon start: 1
transl table: 11
product: alpha-glucosyltransferase
translation: MRICIFMARGLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTSSHDHKSFSIPVILAKEYDKALKLVNDCDILIINSVPATSVQEATINNYKKLLDNIKPSIRVVVYQHDHSVLSLRRNLGLEETVRRADVIFSHSDNGDFNKVLMKEWYPETVSLFDDIEEAPTVYNFQPPMDIVKVRSTYWKDVSEINMNINRWIGRTTTWKGFYQMFDFHEKFLKPAGKSTVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCYINSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTSHDSGIIWFDENDMESTFERIKELSSDRALYDREREKAYEFLYQHQDSSFCFKEQFDIITK
SIO_010081: T4p059
subclass of: SO_0000673
so part of: T4p059
location: complement(36624..37826)
location: region:36624-37826:-1
so has part: feature:36624-37826:-1:exon

NP_049673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36624-37826:-1:exon

T4p060
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: a-gt.1
gene: mobB
locus tag: T4p060
gene synonym: a-gt.1
so part of: sequence
location: complement(37885..38679)
location: region:37885-38679:-1
so has part: feature:37885-38679:-1:exon
subclass of: SO_0000010

1258824
type: Gene
SIO_000068: ncbigene

position:37885:-1
position: 37885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38679:-1
position: 38679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37885-38679:-1:exon

T4p060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: a-gt.1
gene: mobB
locus tag: T4p060
gene synonym: a-gt.1
note: DNA endonuclease; H-N-H family; relative of mobile endonucleases of filamentous fungi
codon start: 1
transl table: 11
product: homing endonuclease
translation: MNYLNIYNLLIEKGLNRGNDKSLLTYYTETHHIIPRCMGGTDDKTNLVLLTPEEHFTAHLLLFKIYRLPKLALAIRMMCYSSDGTRLNNKMYGWIKTAVSSSISESMKEFWKDDDNKKYMSNARRNAGKPIYQYDLNGNFIRKYRCITDAAEDMSYSCSTSIKQCVDGKRKTAGGFQWKYYYSDNIGKPSRMSNATKQKMSKSKRGITQKRNVPVFQYDTTGKLLRVFPRIKDAAVSVKGCMSNIKKCISGKSKIAYGYVWAYS
SIO_010081: T4p060
subclass of: SO_0000673
so part of: T4p060
location: complement(37885..38679)
location: region:37885-38679:-1
so has part: feature:37885-38679:-1:exon

NP_049674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37885-38679:-1:exon

T4p061
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: a-gt.2
locus tag: T4p061
so part of: sequence
location: complement(38731..38922)
location: region:38731-38922:-1
so has part: feature:38731-38922:-1:exon
subclass of: SO_0000010

1258820
type: Gene
SIO_000068: ncbigene

position:38731:-1
position: 38731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38922:-1
position: 38922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38731-38922:-1:exon

T4p061
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: a-gt.2
locus tag: T4p061
codon start: 1
transl table: 11
product: a-gt.2 hypothetical protein
translation: MVATVKDEHPTSEIDYNKIRSSREEMMRRFKEAHDKAKAEGTITYKRIKFKSSNEPLYGVLCG
SIO_010081: T4p061
subclass of: SO_0000673
so part of: T4p061
location: complement(38731..38922)
location: region:38731-38922:-1
so has part: feature:38731-38922:-1:exon

NP_049675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38731-38922:-1:exon

T4p062
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: a-gt.3
locus tag: T4p062
so part of: sequence
location: complement(38907..39110)
location: region:38907-39110:-1
so has part: feature:38907-39110:-1:exon
subclass of: SO_0000010

1258815
type: Gene
SIO_000068: ncbigene

position:38907:-1
position: 38907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39110:-1
position: 39110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38907-39110:-1:exon

T4p062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: a-gt.3
locus tag: T4p062
codon start: 1
transl table: 11
product: a-gt.3 hypothetical protein
translation: MLTHVKFKRLKINAGFTESLNGHLCVKISEKEYRDSSIKEVNPPIVRADPNMKVWVDSYQVKKWWQL
SIO_010081: T4p062
subclass of: SO_0000673
so part of: T4p062
location: complement(38907..39110)
location: region:38907-39110:-1
so has part: feature:38907-39110:-1:exon

NP_049676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38907-39110:-1:exon

T4p063
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: a-gt.4
locus tag: T4p063
so part of: sequence
location: complement(39079..39396)
location: region:39079-39396:-1
so has part: feature:39079-39396:-1:exon
subclass of: SO_0000010

1258814
type: Gene
SIO_000068: ncbigene

position:39079:-1
position: 39079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39396:-1
position: 39396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39079-39396:-1:exon

T4p063
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: a-gt.4
locus tag: T4p063
codon start: 1
transl table: 11
product: a-gt.4 family protein
translation: MTDKPEINDEVEKLISSIEEKNRLEAERKANKLLSKNKRELNRLYKHAQIAAENNNFAQYEYAIKKSRDILKQPYNDELISILWKTTRSQIEDMIDAYTRKIQAS
SIO_010081: T4p063
subclass of: SO_0000673
so part of: T4p063
location: complement(39079..39396)
location: region:39079-39396:-1
so has part: feature:39079-39396:-1:exon

NP_049677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39079-39396:-1:exon

T4p064
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: a-gt.5
locus tag: T4p064
so part of: sequence
location: complement(39398..39616)
location: region:39398-39616:-1
so has part: feature:39398-39616:-1:exon
subclass of: SO_0000010

1258804
type: Gene
SIO_000068: ncbigene

position:39398:-1
position: 39398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39616:-1
position: 39616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39398-39616:-1:exon

T4p064
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: a-gt.5
locus tag: T4p064
codon start: 1
transl table: 11
product: a-gt.5 hypothetical protein
translation: MRLTINLSGFLEEIPEVEAIPYLLKMYLREVLALDIDIDPENPYDTAFKSNGVELNYRYHLTDDDFYFILEK
SIO_010081: T4p064
subclass of: SO_0000673
so part of: T4p064
location: complement(39398..39616)
location: region:39398-39616:-1
so has part: feature:39398-39616:-1:exon

NP_049678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39398-39616:-1:exon

T4p065
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 55
locus tag: T4p065
so part of: sequence
location: complement(39600..40157)
location: region:39600-40157:-1
so has part: feature:39600-40157:-1:exon
subclass of: SO_0000010

1258806
type: Gene
SIO_000068: ncbigene

position:39600:-1
position: 39600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40157:-1
position: 40157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39600-40157:-1:exon

T4p065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 55
locus tag: T4p065
note: T4-encoded sigma factor, associates with host RNAP; gp55; RNA polymerase sigma factor; transcription factor; necessary for 'late' transcription; binds specific promoter sequence; interacts with gp55 sliding clamp
codon start: 1
transl table: 11
product: RNA polymerase sigma factor
translation: MSETKPKYNYVNNKELLQAIIDWKTELANNKDPNKVVRQNDTIGLAIMLIAEGLSKRFNFSGYTQSWKQEMIADGIEASIKGLHNFDETKYKNPHAYITQACFNAFVQRIKKERKEVAKKYSYFVHNVYDSRDDDMVALVDETFIQDIYDKMTHYEESTYRTPGAEKKSVVDDSPSLDFLYEAND
SIO_010081: T4p065
subclass of: SO_0000673
so part of: T4p065
location: complement(39600..40157)
location: region:39600-40157:-1
so has part: feature:39600-40157:-1:exon

NP_049679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39600-40157:-1:exon

T4p066
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 55.1
locus tag: T4p066
so part of: sequence
location: complement(40193..40456)
location: region:40193-40456:-1
so has part: feature:40193-40456:-1:exon
subclass of: SO_0000010

1258698
type: Gene
SIO_000068: ncbigene

position:40193:-1
position: 40193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40456:-1
position: 40456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40193-40456:-1:exon

T4p066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 55.1
locus tag: T4p066
codon start: 1
transl table: 11
product: gp55.1 hypothetical protein
translation: MNEALINDLRLAGYEVNTNGIGLTQIEGNGFILEYEFSQWWLYANYGELIEYVDQFDSLDAALGAANLMKCLKLIHPLCFKIGLQIL
SIO_010081: T4p066
subclass of: SO_0000673
so part of: T4p066
location: complement(40193..40456)
location: region:40193-40456:-1
so has part: feature:40193-40456:-1:exon

NP_049680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40193-40456:-1:exon

T4p067
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 55.2
locus tag: T4p067
so part of: sequence
location: complement(40459..40785)
location: region:40459-40785:-1
so has part: feature:40459-40785:-1:exon
subclass of: SO_0000010

1258748
type: Gene
SIO_000068: ncbigene

position:40459:-1
position: 40459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40785:-1
position: 40785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40459-40785:-1:exon

T4p067
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 55.2
locus tag: T4p067
codon start: 1
transl table: 11
product: gp55.2 hypothetical protein
translation: MTIQIKNAINSYAYDKVVSLLEKGDIVTPQILDKWEKELHQTMKQNDQKIGRNTVRELLVQYILSEFDVKAFGVESKAYQKHEISDKTIRRMKNQRKKKFADLKITKV
SIO_010081: T4p067
subclass of: SO_0000673
so part of: T4p067
location: complement(40459..40785)
location: region:40459-40785:-1
so has part: feature:40459-40785:-1:exon

NP_049681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40459-40785:-1:exon

T4p068
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 55.3
locus tag: T4p068
so part of: sequence
location: complement(40799..41038)
location: region:40799-41038:-1
so has part: feature:40799-41038:-1:exon
subclass of: SO_0000010

1258805
type: Gene
SIO_000068: ncbigene

position:40799:-1
position: 40799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41038:-1
position: 41038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40799-41038:-1:exon

T4p068
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 55.3
locus tag: T4p068
codon start: 1
transl table: 11
product: gp55.3 hypothetical protein
translation: MNPESKLSQRIAEERAKFFQNMKHNGIEDEVFLNWFWNNKYAACEGALSLSVAMMYEGWKGAKKFSLRASAFLDNKILT
SIO_010081: T4p068
subclass of: SO_0000673
so part of: T4p068
location: complement(40799..41038)
location: region:40799-41038:-1
so has part: feature:40799-41038:-1:exon

NP_049682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40799-41038:-1:exon

T4p069
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 55.4
locus tag: T4p069
so part of: sequence
location: complement(41039..41170)
location: region:41039-41170:-1
so has part: feature:41039-41170:-1:exon
subclass of: SO_0000010

1258578
type: Gene
SIO_000068: ncbigene

position:41039:-1
position: 41039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41170:-1
position: 41170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41039-41170:-1:exon

T4p069
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 55.4
locus tag: T4p069
codon start: 1
transl table: 11
product: gp55.4 conserved hypothetical protein
translation: MNIKRMLFKQGLYTLNVTPKGDTTKWSVNDWIKFIDENGNWEI
SIO_010081: T4p069
subclass of: SO_0000673
so part of: T4p069
location: complement(41039..41170)
location: region:41039-41170:-1
so has part: feature:41039-41170:-1:exon

NP_049683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41039-41170:-1:exon

T4p070
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 55.5
locus tag: T4p070
so part of: sequence
location: complement(41178..41471)
location: region:41178-41471:-1
so has part: feature:41178-41471:-1:exon
subclass of: SO_0000010

1258583
type: Gene
SIO_000068: ncbigene

position:41178:-1
position: 41178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41471:-1
position: 41471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41178-41471:-1:exon

T4p070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 55.5
locus tag: T4p070
note: present in T4-related phage RB49
codon start: 1
transl table: 11
product: gp55.5 conserved protein of unknown function
translation: MGKTYRRKDLKVRDYDYFGKRKAPDGVSHKDMVENIFRSDKWRRMKGIDSEVKDELNRQLRGEVRKLKKSVYIDDDFDYNTSQRVAKRKSNECYRYS
SIO_010081: T4p070
subclass of: SO_0000673
so part of: T4p070
location: complement(41178..41471)
location: region:41178-41471:-1
so has part: feature:41178-41471:-1:exon

NP_049684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41178-41471:-1:exon

T4p071
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 55.6
locus tag: T4p071
so part of: sequence
location: complement(41464..41646)
location: region:41464-41646:-1
so has part: feature:41464-41646:-1:exon
subclass of: SO_0000010

1258564
type: Gene
SIO_000068: ncbigene

position:41464:-1
position: 41464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41646:-1
position: 41646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41464-41646:-1:exon

T4p071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 55.6
locus tag: T4p071
codon start: 1
transl table: 11
product: gp55.6 conserved hypothetical protein
translation: MVVVDKEIKKGQYYLVNGNVVRVTYVNGFDVYYLILKLHKRMICDRAVFSSVAKEIKLHG
SIO_010081: T4p071
subclass of: SO_0000673
so part of: T4p071
location: complement(41464..41646)
location: region:41464-41646:-1
so has part: feature:41464-41646:-1:exon

NP_049685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41464-41646:-1:exon

T4p072
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdH
locus tag: T4p072
so part of: sequence
location: complement(41805..42113)
location: region:41805-42113:-1
so has part: feature:41805-42113:-1:exon
subclass of: SO_0000010

1258609
type: Gene
SIO_000068: ncbigene

position:41805:-1
position: 41805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42113:-1
position: 42113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41805-42113:-1:exon

T4p072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdH
locus tag: T4p072
note: related to T4 thioredoxin but has glutaredoxin activity
codon start: 1
transl table: 11
product: NrdH glutaredoxin
translation: MKQNKIEVYGIPDEVGRCPGCQSVTKLLKELNAPFTFYKVLTNNGKIEYDRPLIVSLAKRAGFTSLNIRYPVIFINDSRQKNIKHFKETLISLGYDRDIIED
SIO_010081: T4p072
subclass of: SO_0000673
so part of: T4p072
location: complement(41805..42113)
location: region:41805-42113:-1
so has part: feature:41805-42113:-1:exon

NP_049686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41805-42113:-1:exon

T4p073
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 55.8
locus tag: T4p073
so part of: sequence
location: complement(42116..42328)
location: region:42116-42328:-1
so has part: feature:42116-42328:-1:exon
subclass of: SO_0000010

1258556
type: Gene
SIO_000068: ncbigene

position:42116:-1
position: 42116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42328:-1
position: 42328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42116-42328:-1:exon

T4p073
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 55.8
locus tag: T4p073
codon start: 1
transl table: 11
product: gp55.8 conserved hypothetical predicted membrane protein
translation: MYKFRKGLADFLTTVTFFLFMAVGAIFLIPFIAIFFVISLISPEKGLSSSEFNERLDKITNKLNAALSKE
SIO_010081: T4p073
subclass of: SO_0000673
so part of: T4p073
location: complement(42116..42328)
location: region:42116-42328:-1
so has part: feature:42116-42328:-1:exon

NP_049687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42116-42328:-1:exon

T4p074
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 55.9
gene: nrdG
locus tag: T4p074
gene synonym: 55.9
so part of: sequence
location: complement(42446..42916)
location: region:42446-42916:-1
so has part: feature:42446-42916:-1:exon
subclass of: SO_0000010

1258581
type: Gene
SIO_000068: ncbigene

position:42446:-1
position: 42446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42916:-1
position: 42916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42446-42916:-1:exon

T4p074
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 55.9
gene: nrdG
locus tag: T4p074
gene synonym: 55.9
note: anaerobic ribonucleotide reductase converts rNTPs to dNTPs
codon start: 1
transl table: 11
product: anaerobic ribonucleotide reductase small subunit
translation: MNYDRIYPCDFVNGPGCRVVLFVTGCLHKCEGCYNRSTWNARNGQLFTMNTVKELASHLSKSYIQGLTLTGGDPLYPQNREEISNLVSWVKARFPEKDIWLWTGYKFEDIKQLEMLKYVDVIIDGKYEKNLPTKKLWRGSDNQRLWSNTDGVWKHD
SIO_010081: T4p074
subclass of: SO_0000673
so part of: T4p074
location: complement(42446..42916)
location: region:42446-42916:-1
so has part: feature:42446-42916:-1:exon

NP_049688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42446-42916:-1:exon

T4p075
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 55.10
gene: mobC
locus tag: T4p075
gene synonym: 55.10
so part of: sequence
location: complement(42906..43538)
location: region:42906-43538:-1
so has part: feature:42906-43538:-1:exon
subclass of: SO_0000010

1258570
type: Gene
SIO_000068: ncbigene

position:42906:-1
position: 42906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43538:-1
position: 43538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42906-43538:-1:exon

T4p075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 55.10
gene: mobC
locus tag: T4p075
gene synonym: 55.10
note: DNA endonuclease; H-N-H family; relative of mobile endonucleases of filamentous fungi
codon start: 1
transl table: 11
product: homing endonuclease
translation: MNYDRIYSNLVNSAEHPSKPRQTKAGYELHHIIPRSMGGSDDLDNLVFLTYKAHYTAHHLLAKIYGGKMYDAYWIMSNSKHRKVTSSQYAYAKAKKFENQRGAKRSDKTKKLMSIARSKVTLPDDFGKRISDGLTGRTLSTNHKEHIKNSSRNRFNTKTVIGYSPDGNTIELTGATEIRNAGFFHSAVYKCCKGIQSIHKGYTWKYKDEL
SIO_010081: T4p075
subclass of: SO_0000673
so part of: T4p075
location: complement(42906..43538)
location: region:42906-43538:-1
so has part: feature:42906-43538:-1:exon

NP_049689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42906-43538:-1:exon

T4p076
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: sunY
gene: nrdD
locus tag: T4p076
gene synonym: sunY
so part of: sequence
location: complement(43535..46385)
location: region:43535-46385:-1
so has part: feature:43535-46385:-1:exon
subclass of: SO_0000010

1258655
type: Gene
SIO_000068: ncbigene

position:43535:-1
position: 43535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46385:-1
position: 46385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43535-46385:-1:exon

T4p076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: sunY
gene: nrdD
locus tag: T4p076
gene synonym: sunY
note: anaerobic ribonucleotide reductase converts rNTPs to dNTPs
codon start: 1
transl table: 11
product: anaerobic ribonucleoside reductase large subunit
translation: MTIEKEIEGLIHKTNKDLLNENANKDSRVFPTQRDLMAGIVSKHIAKNMVPSFIMKAHESGIIHVHDIDYSPALPFTNCCLVDLKGMLENGFKLGNAQIETPKSIGVATAIMAQITAQVASHQYGGTTFANVDKVLSPYVKRTYAKHIEDAEKWQIADALNYAQSKTEKDVYDAFQAYEYEVNTLFSSNGQTPFVTITFGTGTDWTERMIQKAILKNRIKGLGRDGITPIFPKLVMFVEEGVNLYKDDPNYDIKQLALECASKRMYPDIISAKNNKAITGSSVPVSPMGCRSFLSVWKDSTGNEILDGRNNLGVVTLNLPRIALDSYIGTQFNEQKFVELFNERMDLCFEALMCRISSLKGVKATVAPILYQEGAFGVRLKPDDDIIELFKNGRSSVSLGYIGIHELNILVGRDIGREILTKMNAHLKQWTERTGFAFSLYSTPAENLCYRFCKLDTEKYGSVKDVTDKGWYTNSFHVSVEENITPFEKISREAPYHFIATGGHISYVELPDMKNNLKGLEAVWDYAAQHLDYFGVNMPVDKCFTCGSTHEMTPTENGFVCSICGETDPKKMNTIRRTCGYLGNPNERGFNLGKNKEIMHRVKHQ
SIO_010081: T4p076
subclass of: SO_0000673
so part of: T4p076
location: complement(join(43535..44814,45848..46385))
location: region:43535-46385:-1
so has part: feature:45848-46385:-1:exon
so has part: feature:43535-44814:-1:exon

NP_049690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45848-46385:-1:exon

position:45848:-1
position: 45848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43535-44814:-1:exon

position:44814:-1
position: 44814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

T4p076
type: Intron
subclass of: SO_0000188
RO_0002162: 2681598
alternative label: sunY
gene: nrdD
locus tag: T4p076
gene synonym: sunY
note: group IA2 self-splicing intron; contains I-TevII CDS
number: 1
SIO_010081: T4p076
subclass of: SO_0000673
so part of: T4p076
location: complement(44815..45847)
location: region:44815-45847:-1
so has part: feature:44815-45847:-1:exon

position:44815:-1
position: 44815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45847:-1
position: 45847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44815-45847:-1:exon

T4p077
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: I-TevII
locus tag: T4p077
so part of: sequence
location: complement(44836..45612)
location: region:44836-45612:-1
so has part: feature:44836-45612:-1:exon
subclass of: SO_0000010

1258800
type: Gene
SIO_000068: ncbigene

position:44836:-1
position: 44836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45612:-1
position: 45612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44836-45612:-1:exon

T4p077
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: I-TevII
locus tag: T4p077
note: DNA endonuclease encoded by group 1A intron in nrdD; GIY-YIG family
codon start: 1
transl table: 11
product: I-TevII homing endonuclease
translation: MKWKLRKSLKIANSVAFTYMVRFPDKSFYIGFKKFKTIYGKDTNWKEYNSSSKLVKEKLKDYKAKWIILQVFDSYESALKHEEMLIRKYFNNEFILNKSIGGYKFNKYPDSEEHKQKLSNAHKGKILSLKHKDKIREKLIEHYKNNSRSEAHVKNNIGSRTAKKTVSIALKSGNKFRSFKSAAKFLKCSEEQVSNHPNVIDIKITIHPVPEYVKINDNIYKSFVDAAKDLKLHPSRIKDLCLDDNYPNYIVSYKRVEK
SIO_010081: T4p077
subclass of: SO_0000673
so part of: T4p077
location: complement(44836..45612)
location: region:44836-45612:-1
so has part: feature:44836-45612:-1:exon

NP_049691.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44836-45612:-1:exon

T4p078
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 49
locus tag: T4p078
so part of: sequence
location: complement(46382..46855)
location: region:46382-46855:-1
so has part: feature:46382-46855:-1:exon
subclass of: SO_0000010

1258702
type: Gene
SIO_000068: ncbigene

position:46382:-1
position: 46382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46855:-1
position: 46855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46382-46855:-1:exon

T4p078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 49
locus tag: T4p078
note: endo VII; gp49; cleaves Holliday junctions, Y-junctions, and mismatched base pairs in heteroduplex DNA; involved in recombination mediated replication and packaging
codon start: 1
transl table: 11
product: endonuclease VII
translation: MLLTGKLYKEEKQKFYDAQNGKCLICQRELNPDVQANHLDHDHELNGPKAGKVRGLLCNLCNAAEGQMKHKFNRSGLKGQGVDYLEWLENLLTYLKSDYTQNNIHPNFVGDKSKEFSRLGKEEMMAEMLQRGFEYNESDTKTQLIASFKKQLRKSLK
SIO_010081: T4p078
subclass of: SO_0000673
so part of: T4p078
location: complement(46382..46855)
location: region:46382-46855:-1
so has part: feature:46382-46855:-1:exon

NP_049692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46382-46855:-1:exon

T4p079
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 49
locus tag: T4p079
so part of: sequence
location: complement(46382..46699)
location: region:46382-46699:-1
so has part: feature:46382-46699:-1:exon
subclass of: SO_0000010

1258772
type: Gene
SIO_000068: ncbigene

position:46699:-1
position: 46699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46382-46699:-1:exon

T4p079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 49
locus tag: T4p079
note: endo VII; gp49; cleaves Holliday junctions, Y-junctions, and mismatched base pairs in heteroduplex DNA; involved in recombination mediated replication and packaging
codon start: 1
transl table: 11
product: endonuclease VII
translation: MRGLLCNLCNAAEGQMKHKFNRSGLKGQGVDYLEWLENLLTYLKSDYTQNNIHPNFVGDKSKEFSRLGKEEMMAEMLQRGFEYNESDTKTQLIASFKKQLRKSLK
SIO_010081: T4p079
subclass of: SO_0000673
so part of: T4p079
location: complement(46382..46699)
location: region:46382-46699:-1
so has part: feature:46382-46699:-1:exon

NP_049693.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46382-46699:-1:exon

T4p080
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: pin
locus tag: T4p080
so part of: sequence
location: complement(46897..47382)
location: region:46897-47382:-1
so has part: feature:46897-47382:-1:exon
subclass of: SO_0000010

1258773
type: Gene
SIO_000068: ncbigene

position:46897:-1
position: 46897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47382:-1
position: 47382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46897-47382:-1:exon

T4p080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: pin
locus tag: T4p080
note: stabilizes proteins during T4 infection
codon start: 1
transl table: 11
product: inhibitor of host Lon protease
translation: MITVDKWFRINRADTGLCNYWPELSAGTVFKVRELVKECEDDIEPDTGIIEIELSDGKIINIYDKPITYWCLWNTESVENGEIEEVVERTNQVVQKPKADFQGERISYALAKLAAQENNDGYEGNLMQAAAEYIEWLETQISFSDRMIQQYKRLHQMFYNT
SIO_010081: T4p080
subclass of: SO_0000673
so part of: T4p080
location: complement(46897..47382)
location: region:46897-47382:-1
so has part: feature:46897-47382:-1:exon

NP_049694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46897-47382:-1:exon

T4p081
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 49.1
locus tag: T4p081
so part of: sequence
location: complement(47366..47521)
location: region:47366-47521:-1
so has part: feature:47366-47521:-1:exon
subclass of: SO_0000010

1258739
type: Gene
SIO_000068: ncbigene

position:47366:-1
position: 47366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47521:-1
position: 47521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47366-47521:-1:exon

T4p081
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 49.1
locus tag: T4p081
note: also found in phage RB49
codon start: 1
transl table: 11
product: gp49.1 conserved protein of unknown function
translation: MDYAIKPWWAARWETVEPEPEEPVYTDEETVYNEPTINDLIDMEMGHDYSR
SIO_010081: T4p081
subclass of: SO_0000673
so part of: T4p081
location: complement(47366..47521)
location: region:47366-47521:-1
so has part: feature:47366-47521:-1:exon

NP_049695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47366-47521:-1:exon

T4p082
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 49.2
locus tag: T4p082
so part of: sequence
location: complement(47506..47826)
location: region:47506-47826:-1
so has part: feature:47506-47826:-1:exon
subclass of: SO_0000010

1258651
type: Gene
SIO_000068: ncbigene

position:47506:-1
position: 47506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47826:-1
position: 47826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47506-47826:-1:exon

T4p082
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 49.2
locus tag: T4p082
codon start: 1
transl table: 11
product: ribonucleotide reductase
translation: MNIENKLDVDAVLSEIIEDHDAFSENYDFDFSDYLKPIEIEDWVQDGKCQYRQCVYFSPKHNVHVAVNESRSGSYHSDWYYAVPTVELVELRERVVTQTVREWITL
SIO_010081: T4p082
subclass of: SO_0000673
so part of: T4p082
location: complement(47506..47826)
location: region:47506-47826:-1
so has part: feature:47506-47826:-1:exon

NP_049696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47506-47826:-1:exon

T4p083
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 49.3
locus tag: T4p083
so part of: sequence
location: complement(47823..48131)
location: region:47823-48131:-1
so has part: feature:47823-48131:-1:exon
subclass of: SO_0000010

1258788
type: Gene
SIO_000068: ncbigene

position:47823:-1
position: 47823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48131:-1
position: 48131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47823-48131:-1:exon

T4p083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 49.3
locus tag: T4p083
codon start: 1
transl table: 11
product: gp49.3 hypothetical protein
translation: MIELNEQIIFLGDGTEGDLEYKLYEYMIWLAKAEGIDFVVSNPYGENTVVIGGTAYEVEWRYVGLKSEEYDVTDEGKWIPIGPWFWEHGEPDFEVSSWWCEK
SIO_010081: T4p083
subclass of: SO_0000673
so part of: T4p083
location: complement(47823..48131)
location: region:47823-48131:-1
so has part: feature:47823-48131:-1:exon

NP_049697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47823-48131:-1:exon

T4p084
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC
locus tag: T4p084
so part of: sequence
location: complement(48128..48391)
location: region:48128-48391:-1
so has part: feature:48128-48391:-1:exon
subclass of: SO_0000010

1258540
type: Gene
SIO_000068: ncbigene

position:48128:-1
position: 48128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48391:-1
position: 48391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48128-48391:-1:exon

T4p084
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC
locus tag: T4p084
codon start: 1
transl table: 11
product: NrdC thioredoxin
translation: MFKVYGYDSNIHKCVYCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFDQLREYFK
SIO_010081: T4p084
subclass of: SO_0000673
so part of: T4p084
location: complement(48128..48391)
location: region:48128-48391:-1
so has part: feature:48128-48391:-1:exon

NP_049698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48128-48391:-1:exon

T4p085
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.1
locus tag: T4p085
so part of: sequence
location: complement(48393..48635)
location: region:48393-48635:-1
so has part: feature:48393-48635:-1:exon
subclass of: SO_0000010

1258825
type: Gene
SIO_000068: ncbigene

position:48393:-1
position: 48393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48635:-1
position: 48635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48393-48635:-1:exon

T4p085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.1
locus tag: T4p085
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKRKEYMETAEKAVRELAIAYYNEHGKFPDRYSVLKSALTRSYKNMLSEVSDIIYKHKEQTGQSLDYDETFKQVLGIKE
SIO_010081: T4p085
subclass of: SO_0000673
so part of: T4p085
location: complement(48393..48635)
location: region:48393-48635:-1
so has part: feature:48393-48635:-1:exon

NP_049699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48393-48635:-1:exon

T4p086
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.2
locus tag: T4p086
so part of: sequence
location: complement(48622..48936)
location: region:48622-48936:-1
so has part: feature:48622-48936:-1:exon
subclass of: SO_0000010

1258742
type: Gene
SIO_000068: ncbigene

position:48622:-1
position: 48622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48936:-1
position: 48936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48622-48936:-1:exon

T4p086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.2
locus tag: T4p086
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKRLLEDIAASSNSSLIKIIMAGEEDDLEMRGKIYGCDDYSPPVNWDSVMVMVERRERASKNVPNCPECGTEQVQLVHWQTNNLRYKCRHCKHRFDREENDKA
SIO_010081: T4p086
subclass of: SO_0000673
so part of: T4p086
location: complement(48622..48936)
location: region:48622-48936:-1
so has part: feature:48622-48936:-1:exon

NP_049700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48622-48936:-1:exon

T4p087
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.3
locus tag: T4p087
so part of: sequence
location: complement(48933..49859)
location: region:48933-49859:-1
so has part: feature:48933-49859:-1:exon
subclass of: SO_0000010

1258543
type: Gene
SIO_000068: ncbigene

position:48933:-1
position: 48933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49859:-1
position: 49859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48933-49859:-1:exon

T4p087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.3
locus tag: T4p087
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTRKHYIDYFDSLITKHRDYQKGHREVINNILRDFLDYIGWENHICKDTQNAYSHSLGSLLEWFKRSRLLSSVIAVNNVKKFMYPSYIETNVSNDNVVTFNIINDVKRTYLEEWFSKDSKEKFASEFSHEFNNNVNMLFKHSRRLFCHGDDRTINVNVKDWVTAKFIPSSQNGPFELLIIVCAPHEIYKNLPYMKPCEANKHNKTIRSLTYKLRTLLSKMDVVESFDDNTNYGLSLFETKVVIKLKDPNKFKPTPKPNHGNDTMKEEREYLSTRLIEVEKQIEEHTKVLKDLTAKANGLRNAIEVLK
SIO_010081: T4p087
subclass of: SO_0000673
so part of: T4p087
location: complement(48933..49859)
location: region:48933-49859:-1
so has part: feature:48933-49859:-1:exon

NP_049701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48933-49859:-1:exon

T4p088
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.4
locus tag: T4p088
so part of: sequence
location: complement(49914..50915)
location: region:49914-50915:-1
so has part: feature:49914-50915:-1:exon
subclass of: SO_0000010

1258539
type: Gene
SIO_000068: ncbigene

position:49914:-1
position: 49914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50915:-1
position: 50915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49914-50915:-1:exon

T4p088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.4
locus tag: T4p088
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRNEYIKSFNSVIDDKAIPMFGQNSVLSIINQWLNSVDASIVSSTKFIHEIRKISSRVDKDVIKKTFKESRLLSYLVNRDILGNFGKEIKRTKDVVGYNWFGDVNSYHLNNKEDPENIFTRRWISNFRLFKKQILKSASKLCYGDYRQIHPLASDMIIIKEYELDKNKVSIFVNYGFFTPETNQKNINKFFSIASTITRQLETALLCMETVENIHTYPFKNICGWEGYKLVISLREVKCAYSPTSKEIYQQKCDEIVNTPKEETTLEELMECLDDSPEPIEIRPEVIALEKAYKEVLEISNKAQKEYEQAKKIWEESVNRLDRLEQALQLIK
SIO_010081: T4p088
subclass of: SO_0000673
so part of: T4p088
location: complement(49914..50915)
location: region:49914-50915:-1
so has part: feature:49914-50915:-1:exon

NP_049702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49914-50915:-1:exon

T4p089
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.5
locus tag: T4p089
so part of: sequence
location: complement(50973..51995)
location: region:50973-51995:-1
so has part: feature:50973-51995:-1:exon
subclass of: SO_0000010

1258750
type: Gene
SIO_000068: ncbigene

position:50973:-1
position: 50973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51995:-1
position: 51995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50973-51995:-1:exon

T4p089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.5
locus tag: T4p089
codon start: 1
transl table: 11
product: NrdC.5 conserved hypothetical protein
translation: MKTRSQIEDMVRNASYTRDVMTFLCENNLDPDKVNRVIHHFKYTNSSEWVRNFSKAGYITQMTAREQLTDFCKTIDYKNPLFVQGVGQSKVDLSSGFFNPNHYRIEWRFIALFRRQLKQILSTASRLKGSDINLKNLKFDGYTLQMEVRPLKENNRTARISFKPNTKNSLSICECLKSQLTEAFKYMDVVAAVQSKILPRFERFKLDTTSYELDMIVSFKYEFLRKDEVTQEKKQEVQDNLNLSNYLSNDPKFWMYSSGNKDAWKFNKVNFLPVENPSLKPVEKWHADAIEKSLKAVDAELVKATNEVLEAEKALEQAQSRVQNLTKQRSKLNNALNALN
SIO_010081: T4p089
subclass of: SO_0000673
so part of: T4p089
location: complement(50973..51995)
location: region:50973-51995:-1
so has part: feature:50973-51995:-1:exon

NP_049703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50973-51995:-1:exon

T4p090
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.6
locus tag: T4p090
so part of: sequence
location: complement(52066..52893)
location: region:52066-52893:-1
so has part: feature:52066-52893:-1:exon
subclass of: SO_0000010

1258637
type: Gene
SIO_000068: ncbigene

position:52066:-1
position: 52066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52893:-1
position: 52893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52066-52893:-1:exon

T4p090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.6
locus tag: T4p090
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVVINNVNAVIKSLVNKKMMNEWTVLRRGEPDKFFHRFNPTLDLNVIDRDVHAEILDKFKVDIGFGLEKHLQRTNGSGMSLSNRIMKALNKIGALSRINASEILRNYNKGYDLYGRLMPKLSFDQMIADLWENQRRLLALGARLAKGLDKQMIFKTNNTEDLKCFKFSTRGDDYYIRARSTDYVNMGHHLCLAFEVLKEAGTLEYSSGAKCPIGSNCILIYRPNESSSTKLPTKPVPVRSNEKHSEQIDYFNKQIEELIFLFNNMMMKFSDYLD
SIO_010081: T4p090
subclass of: SO_0000673
so part of: T4p090
location: complement(52066..52893)
location: region:52066-52893:-1
so has part: feature:52066-52893:-1:exon

NP_049704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52066-52893:-1:exon

T4p091
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.7
locus tag: T4p091
so part of: sequence
location: complement(52901..53302)
location: region:52901-53302:-1
so has part: feature:52901-53302:-1:exon
subclass of: SO_0000010

1258749
type: Gene
SIO_000068: ncbigene

position:52901:-1
position: 52901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53302:-1
position: 53302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52901-53302:-1:exon

T4p091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.7
locus tag: T4p091
codon start: 1
transl table: 11
product: NrdC.7 conserved hypothetical, predicted membrane protein
translation: MKQLIIKRLNLLICCLCIVIAYGYYAINDYMHYKDYDVTVVNTLTGTQGKGSSLSFIAVYELKDGYRFSEYISPETYSSIEKGDNITVSLRPFDVKQTWFDNIVWFFGMALVQSICGTYIVCSILFRVIGKIE
SIO_010081: T4p091
subclass of: SO_0000673
so part of: T4p091
location: complement(52901..53302)
location: region:52901-53302:-1
so has part: feature:52901-53302:-1:exon

NP_049705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52901-53302:-1:exon

T4p092
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.8
locus tag: T4p092
so part of: sequence
location: complement(53358..53885)
location: region:53358-53885:-1
so has part: feature:53358-53885:-1:exon
subclass of: SO_0000010

1258541
type: Gene
SIO_000068: ncbigene

position:53358:-1
position: 53358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53885:-1
position: 53885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53358-53885:-1:exon

T4p092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.8
locus tag: T4p092
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAKDIFNLVNYNDGKFKSEAQSKFFNDISIGGEITVNGGQIYKSRWNWIVIIDEIGIVEIYKNTNKNRTLHWSRDTNEQYKKDKASKLSRVTQEDIEFIKKDILMYDNLIAEEQAVIDKFDEIKASREIPDFMKESVNERYTLISERIETYKKQRAERQNTLRKFEERLNTVLA
SIO_010081: T4p092
subclass of: SO_0000673
so part of: T4p092
location: complement(53358..53885)
location: region:53358-53885:-1
so has part: feature:53358-53885:-1:exon

NP_049706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53358-53885:-1:exon

T4p093
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.9
locus tag: T4p093
so part of: sequence
location: complement(53946..54248)
location: region:53946-54248:-1
so has part: feature:53946-54248:-1:exon
subclass of: SO_0000010

1258649
type: Gene
SIO_000068: ncbigene

position:53946:-1
position: 53946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54248:-1
position: 54248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53946-54248:-1:exon

T4p093
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.9
locus tag: T4p093
codon start: 1
transl table: 11
product: NrdC.9 conserved hypothetical protein
translation: MLYSKAREIYETKIKEAVFQFATTMRWTNDWEYSKNHKKPLVTRKAHMLVLIDREQIKAREALQNHKKAAFEWFMDNTAPETKKAVSAWFSGKNCERSFF
SIO_010081: T4p093
subclass of: SO_0000673
so part of: T4p093
location: complement(53946..54248)
location: region:53946-54248:-1
so has part: feature:53946-54248:-1:exon

NP_049707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53946-54248:-1:exon

T4p094
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdC.10
locus tag: T4p094
so part of: sequence
location: complement(54343..55320)
location: region:54343-55320:-1
so has part: feature:54343-55320:-1:exon
subclass of: SO_0000010

1258566
type: Gene
SIO_000068: ncbigene

position:54343:-1
position: 54343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55320:-1
position: 55320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54343-55320:-1:exon

T4p094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdC.10
locus tag: T4p094
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTVTINKGMYFGKEISGTFELLGEWFPDNAPVDAQGDGKVFVEIDGKRRGVWVYKSDISYDGVKVEEVKESYEDMKTRINKRFNVMGMMTNGIINGNIRSLIISGAAGIGKTYSLDKALNKANDIGYIEYKSINGKISGIGLYEQLWNNREENSVLLIDDVDVFSDMDILNLLKAALDTGETRKVCWSTASSYLEEKGIERELEFKGTIVFITNVDIDRELDRGTKLAPHLQALVSRSVYLDLGVHTNEEIMVRVEDVILSTDMMQKRGLSDEETYKALSWMKVNVNRLRNVSLRTALYLADFIMTDKNGWEEIATGYSSEINS
SIO_010081: T4p094
subclass of: SO_0000673
so part of: T4p094
location: complement(54343..55320)
location: region:54343-55320:-1
so has part: feature:54343-55320:-1:exon

NP_049708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54343-55320:-1:exon

T4p095
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: tk.-11
gene: nrdC.11
locus tag: T4p095
gene synonym: tk.-11
so part of: sequence
location: complement(55435..56445)
location: region:55435-56445:-1
so has part: feature:55435-56445:-1:exon
subclass of: SO_0000010

1258584
type: Gene
SIO_000068: ncbigene

position:55435:-1
position: 55435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56445:-1
position: 56445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55435-56445:-1:exon

T4p095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: tk.-11
gene: nrdC.11
locus tag: T4p095
gene synonym: tk.-11
codon start: 1
transl table: 11
product: nucleotidyltransferase
translation: MKTVVKSYFGSHLYGTSTPESDVDFKEIFVPPARDILIGNVKEHMSKNTNNTSSKNTKDNIDHELYSLKYFFKLAADGEPVALDMLHTPPELVVKSDLPDVWKFIQDNRSRFYTTNMKSYLGYVRKQASKYGVKGSRLAALRDVLKVVNQIPEQWVDYQEDGSIKQRRTKVEDIKHRLPENEFCEWVFHNHEKTGPQTFYTVLGRKYQTTLSLIELKQSLNKLDAEYGERARKAEANEGIDWKALSHACRGGLQLLEIYKTGDLVYPLQDAPFILDVKLGKHPFKTVQEFLEDVVDQVEAASTEASKNGMQQKVDMSFWDDFLERVYLENHRSYYK
SIO_010081: T4p095
subclass of: SO_0000673
so part of: T4p095
location: complement(55435..56445)
location: region:55435-56445:-1
so has part: feature:55435-56445:-1:exon

NP_049709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55435-56445:-1:exon

unsure
type: Feature
subclass of: SO_0000001
RO_0002162: 2681598
note: occupies the third position of a codon that accepts full wobble and codes for valine from the (-) strand; valine is conserved in this same position of NrdC.11 in the related phage RB69
replace: a
replace: c
so part of: sequence
location: 56143
location: region:56143-56143:1
so has part: feature:56143-56143:1:region

position:56143:1
position: 56143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56143-56143:1:region

T4p096
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: nrdC.12
alternative label: tk.-10
gene: mobD
locus tag: T4p096
gene synonym: nrdC.12; tk.-10
so part of: sequence
location: complement(56429..57208)
location: region:56429-57208:-1
so has part: feature:56429-57208:-1:exon
subclass of: SO_0000010

1258744
type: Gene
SIO_000068: ncbigene

position:56429:-1
position: 56429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57208:-1
position: 57208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56429-57208:-1:exon

T4p096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: nrdC.12
alternative label: tk.-10
gene: mobD
locus tag: T4p096
gene synonym: nrdC.12; tk.-10
note: DNA endonuclease; H-N-H family; relative of mobile endonucleases of filamentous fungi
codon start: 1
transl table: 11
product: homing endonuclease
translation: MNYTKVYNNLIKKGKLRKLDKSKLNFYTEKHHIIPSCIGGNDDSDNLVLLTAREHFIAHWLLAKIHYNSPGLIYAWWSFYNFGEDSLGRNLKLTSRGYQLVREKFSKIHSNTMKEMWKSNEYREKRSITLSLPEIRAKISESQLEAQNKPEVKEKISKGVKAAFKRPGVKEKHSAAVKKSLNNFEAKKKQSNSSKIRQRTGKHWQDYDLLYKLWIKLNRPKRGSFGTYISKLGYPKSNYHRLIVQFNEDYERSNNENCS
SIO_010081: T4p096
subclass of: SO_0000673
so part of: T4p096
location: complement(56429..57208)
location: region:56429-57208:-1
so has part: feature:56429-57208:-1:exon

NP_049710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56429-57208:-1:exon

T4p097
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: tk.-9
gene: mobD.1
locus tag: T4p097
gene synonym: tk.-9
so part of: sequence
location: complement(57283..57828)
location: region:57283-57828:-1
so has part: feature:57283-57828:-1:exon
subclass of: SO_0000010

1258723
type: Gene
SIO_000068: ncbigene

position:57283:-1
position: 57283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57828:-1
position: 57828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57283-57828:-1:exon

T4p097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: tk.-9
gene: mobD.1
locus tag: T4p097
gene synonym: tk.-9
codon start: 1
transl table: 11
product: MobD.1 conserved hypothetical protein
translation: MMSEAKRLVLEVSPLFGELAIEKVNNMYRLTQEDDMLYFTPSEIVRLTQIEYAYTDKIVSINDEHKIHFYSSCPGFNIKSESMCLSINNWDNFITNIKYFYDSTKRKHNLKWFKKCNAIITNSCNQNDETILNVSKCYEEGDVVSIRQIDDFRSHIITLKKEEAIALKTYLDSVIPTMISK
SIO_010081: T4p097
subclass of: SO_0000673
so part of: T4p097
location: complement(57283..57828)
location: region:57283-57828:-1
so has part: feature:57283-57828:-1:exon

NP_049711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57283-57828:-1:exon

T4p098
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: tk.-8
gene: mobD.2
locus tag: T4p098
gene synonym: tk.-8
so part of: sequence
location: complement(57828..57932)
location: region:57828-57932:-1
so has part: feature:57828-57932:-1:exon
subclass of: SO_0000010

1258550
type: Gene
SIO_000068: ncbigene

position:57932:-1
position: 57932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57828-57932:-1:exon

T4p098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: tk.-8
gene: mobD.2
locus tag: T4p098
gene synonym: tk.-8
codon start: 1
transl table: 11
product: MobD.2 conserved hypothetical protein
translation: MKVLFVIYVMIQYNYPMFTYNLVNNIINMIQRSM
SIO_010081: T4p098
subclass of: SO_0000673
so part of: T4p098
location: complement(57828..57932)
location: region:57828-57932:-1
so has part: feature:57828-57932:-1:exon

NP_049712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57828-57932:-1:exon

T4p099
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: mobD.2a
locus tag: T4p099
so part of: sequence
location: complement(58049..58165)
location: region:58049-58165:-1
so has part: feature:58049-58165:-1:exon
subclass of: SO_0000010

1258571
type: Gene
SIO_000068: ncbigene

position:58049:-1
position: 58049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58165:-1
position: 58165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58049-58165:-1:exon

T4p099
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: mobD.2a
locus tag: T4p099
codon start: 1
transl table: 11
product: MobD.2a hypothetical protein
translation: MKTEKQMFLMKLIEEYANAVSDYECSSRERGTAFPRKK
SIO_010081: T4p099
subclass of: SO_0000673
so part of: T4p099
location: complement(58049..58165)
location: region:58049-58165:-1
so has part: feature:58049-58165:-1:exon

NP_813809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58049-58165:-1:exon

T4p100
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: tk.-7
gene: mobD.3
locus tag: T4p100
gene synonym: tk.-7
so part of: sequence
location: complement(58155..58349)
location: region:58155-58349:-1
so has part: feature:58155-58349:-1:exon
subclass of: SO_0000010

1258661
type: Gene
SIO_000068: ncbigene

position:58155:-1
position: 58155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58349:-1
position: 58349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58155-58349:-1:exon

T4p100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: tk.-7
gene: mobD.3
locus tag: T4p100
gene synonym: tk.-7
codon start: 1
transl table: 11
product: MobD.3 hypothetical protein
translation: MLTREQFEKIIKLAHDIEIDSYQLAVEHCEGYSYDGIEAAKRDLDKSKAKLVQYLEMIRWNNEN
SIO_010081: T4p100
subclass of: SO_0000673
so part of: T4p100
location: complement(58155..58349)
location: region:58155-58349:-1
so has part: feature:58155-58349:-1:exon

NP_049713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58155-58349:-1:exon

T4p101
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: tk.-6
gene: mobD.4
locus tag: T4p101
gene synonym: tk.-6
so part of: sequence
location: complement(58352..58534)
location: region:58352-58534:-1
so has part: feature:58352-58534:-1:exon
subclass of: SO_0000010

1258690
type: Gene
SIO_000068: ncbigene

position:58352:-1
position: 58352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58534:-1
position: 58534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58352-58534:-1:exon

T4p101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: tk.-6
gene: mobD.4
locus tag: T4p101
gene synonym: tk.-6
codon start: 1
transl table: 11
product: molybdopterin-guanine dinucleotide biosynthesis protein MobD
translation: MISIEQADKIKELVALIRKADEERINFALSGIEEFEAKVNNAVEALDMFLDEIIDHNTRV
SIO_010081: T4p101
subclass of: SO_0000673
so part of: T4p101
location: complement(58352..58534)
location: region:58352-58534:-1
so has part: feature:58352-58534:-1:exon

NP_049714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58352-58534:-1:exon

T4p102
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: tk.-5
gene: mobD.5
locus tag: T4p102
gene synonym: tk.-5
so part of: sequence
location: complement(58534..58722)
location: region:58534-58722:-1
so has part: feature:58534-58722:-1:exon
subclass of: SO_0000010

1258558
type: Gene
SIO_000068: ncbigene

position:58722:-1
position: 58722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58534-58722:-1:exon

T4p102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: tk.-5
gene: mobD.5
locus tag: T4p102
gene synonym: tk.-5
codon start: 1
transl table: 11
product: MobD.5 hypothetical protein
translation: MKIEALNQEGNIYVIINGDFFVDMDEVTSEELVELLKKRYNMCDEVATHMACAIFSLSYVVE
SIO_010081: T4p102
subclass of: SO_0000673
so part of: T4p102
location: complement(58534..58722)
location: region:58534-58722:-1
so has part: feature:58534-58722:-1:exon

NP_049715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58534-58722:-1:exon

T4p103
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: mobD.6
alternative label: tk.-3 and tk.-4
gene: rI.-1
locus tag: T4p103
gene synonym: mobD.6; tk.-3 and tk.-4
so part of: sequence
location: complement(58819..59205)
location: region:58819-59205:-1
so has part: feature:58819-59205:-1:exon
subclass of: SO_0000010

1258569
type: Gene
SIO_000068: ncbigene

position:58819:-1
position: 58819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59205:-1
position: 59205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58819-59205:-1:exon

T4p103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: mobD.6
alternative label: tk.-3 and tk.-4
gene: rI.-1
locus tag: T4p103
gene synonym: mobD.6; tk.-3 and tk.-4
note: rI.-1; MobD.6
codon start: 1
transl table: 11
product: starvation-inducible transcriptional regulator
translation: MKFSDFSQSGKPSKADEYLGLLMAAQAYFHSAHFETKSYARHKAYDFIFSELPDLIDKFGEQYLGYSGRKYTPSIPDASKLPTDTIKMIDRILDQSNSIYKEMPPAIQSTIDDITGMFYQSKYLLSLE
SIO_010081: T4p103
subclass of: SO_0000673
so part of: T4p103
location: complement(58819..59205)
location: region:58819-59205:-1
so has part: feature:58819-59205:-1:exon

NP_049716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58819-59205:-1:exon

T4p104
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: mobD.8
alternative label: tk.-2
gene: rI
locus tag: T4p104
gene synonym: mobD.8; tk.-2
so part of: sequence
location: complement(59202..59495)
location: region:59202-59495:-1
so has part: feature:59202-59495:-1:exon
subclass of: SO_0000010

1258591
type: Gene
SIO_000068: ncbigene

position:59202:-1
position: 59202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59495:-1
position: 59495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59202-59495:-1:exon

T4p104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: mobD.8
alternative label: tk.-2
gene: rI
locus tag: T4p104
gene synonym: mobD.8; tk.-2
note: acts in concert with T4 t holin protein for lysis timing
codon start: 1
transl table: 11
product: lysis inhibition
translation: MALKATALFAMLGLSFVLSPSIEANVDPHFDKFMESGIRHVYMLFENKSVESSEQFYSFMRTTYKNDPCSSDFECIERGAEMAQSYARIMNIKLETE
SIO_010081: T4p104
subclass of: SO_0000673
so part of: T4p104
location: complement(59202..59495)
location: region:59202-59495:-1
so has part: feature:59202-59495:-1:exon

NP_049717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59202-59495:-1:exon

T4p105
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: mobD.9
alternative label: tk.-1
gene: rI.1
locus tag: T4p105
gene synonym: mobD.9; tk.-1
so part of: sequence
location: complement(59508..59720)
location: region:59508-59720:-1
so has part: feature:59508-59720:-1:exon
subclass of: SO_0000010

1258711
type: Gene
SIO_000068: ncbigene

position:59508:-1
position: 59508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59720:-1
position: 59720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59508-59720:-1:exon

T4p105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: mobD.9
alternative label: tk.-1
gene: rI.1
locus tag: T4p105
gene synonym: mobD.9; tk.-1
note: possible lysis inhibition component
codon start: 1
transl table: 11
product: rI.1 conserved hypothetical protein
translation: MLQLTEKQLRNLTVLQLDEIRREVGNIISALRREVSLNQSPADYTRLRNFEKYLDKVKAVHRHKVNTGQK
SIO_010081: T4p105
subclass of: SO_0000673
so part of: T4p105
location: complement(59508..59720)
location: region:59508-59720:-1
so has part: feature:59508-59720:-1:exon

NP_049718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59508-59720:-1:exon

T4p106
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: tk
locus tag: T4p106
so part of: sequence
location: complement(59763..60344)
location: region:59763-60344:-1
so has part: feature:59763-60344:-1:exon
subclass of: SO_0000010

1258712
type: Gene
SIO_000068: ncbigene

position:59763:-1
position: 59763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60344:-1
position: 60344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59763-60344:-1:exon

T4p106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: tk
locus tag: T4p106
codon start: 1
transl table: 11
product: thymidine kinase
translation: MASLIFTYAAMNAGKSASLLIAAHNYKERGMSVLVLKPAIDTRDSVCEVVSRIGIKQEANIITDDMDIFEFYKWAEAQKDIHCVFVDEAQFLKTEQVHQLSRIVDTYNVPVMAYGLRTDFAGKLFEGSKELLAIADKLIELKAVCHCGKKAIMTARLMEDGTPVKEGNQICIGDEIYVSLCRKHWNELTKKLG
SIO_010081: T4p106
subclass of: SO_0000673
so part of: T4p106
location: complement(59763..60344)
location: region:59763-60344:-1
so has part: feature:59763-60344:-1:exon

NP_049719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59763-60344:-1:exon

T4p107
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: tk.1
locus tag: T4p107
so part of: sequence
location: complement(60346..60534)
location: region:60346-60534:-1
so has part: feature:60346-60534:-1:exon
subclass of: SO_0000010

1258719
type: Gene
SIO_000068: ncbigene

position:60346:-1
position: 60346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60534:-1
position: 60534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60346-60534:-1:exon

T4p107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: tk.1
locus tag: T4p107
codon start: 1
transl table: 11
product: Tk.1 conserved hypothetical protein
translation: MITREQKNEILFLVGEIISLEKDLSFEISSEYGDAETYYELVKSIDKAENDLETYLENLTKD
SIO_010081: T4p107
subclass of: SO_0000673
so part of: T4p107
location: complement(60346..60534)
location: region:60346-60534:-1
so has part: feature:60346-60534:-1:exon

NP_049720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60346-60534:-1:exon

T4p108
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: tk.2
locus tag: T4p108
so part of: sequence
location: complement(60531..60716)
location: region:60531-60716:-1
so has part: feature:60531-60716:-1:exon
subclass of: SO_0000010

1258579
type: Gene
SIO_000068: ncbigene

position:60531:-1
position: 60531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60716:-1
position: 60716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60531-60716:-1:exon

T4p108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: tk.2
locus tag: T4p108
codon start: 1
transl table: 11
product: Tk.2 conserved hypothetical protein
translation: MSLSKEQKDTLFSLIHEVMDKNSELEKVCNECGPFSANEYEELSKEFDNKEQELIDYINSL
SIO_010081: T4p108
subclass of: SO_0000673
so part of: T4p108
location: complement(60531..60716)
location: region:60531-60716:-1
so has part: feature:60531-60716:-1:exon

NP_049721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60531-60716:-1:exon

T4p109
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: tk.3
locus tag: T4p109
so part of: sequence
location: complement(60713..60925)
location: region:60713-60925:-1
so has part: feature:60713-60925:-1:exon
subclass of: SO_0000010

1258705
type: Gene
SIO_000068: ncbigene

position:60713:-1
position: 60713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60925:-1
position: 60925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60713-60925:-1:exon

T4p109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: tk.3
locus tag: T4p109
codon start: 1
transl table: 11
product: Tk.2 conserved hypothetical protein
translation: MNIHYPHPYDPKNKAVIIRQWERICRTKCPINSPHDVDKDYIGTFVEYTFIDKKGRKQHVEEYCLKVTWL
SIO_010081: T4p109
subclass of: SO_0000673
so part of: T4p109
location: complement(60713..60925)
location: region:60713-60925:-1
so has part: feature:60713-60925:-1:exon

NP_049722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60713-60925:-1:exon

T4p110
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: tk.4
locus tag: T4p110
so part of: sequence
location: complement(60922..61389)
location: region:60922-61389:-1
so has part: feature:60922-61389:-1:exon
subclass of: SO_0000010

1258663
type: Gene
SIO_000068: ncbigene

position:60922:-1
position: 60922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61389:-1
position: 61389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60922-61389:-1:exon

T4p110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: tk.4
locus tag: T4p110
note: Tk.4; contains A1pp phosphatase motif
codon start: 1
transl table: 11
product: phosphatase
translation: MIVKYIKGDIVALFAEGKNIAHGCNCFHTMGSGVAGQLTKAFPKILEADKLQTEWGDVTKLGSYSVYEKYFRTHKAYCFNLYTQFQPGPNFEYSALMNCMLELNEFGENKLIKPTIYMPRIGAGIGKGNWDIIEGILDTYSSKLEIVIVDWEPLL
SIO_010081: T4p110
subclass of: SO_0000673
so part of: T4p110
location: complement(60922..61389)
location: region:60922-61389:-1
so has part: feature:60922-61389:-1:exon

NP_049723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60922-61389:-1:exon

T4p111
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: vs
locus tag: T4p111
so part of: sequence
location: complement(61386..61733)
location: region:61386-61733:-1
so has part: feature:61386-61733:-1:exon
subclass of: SO_0000010

1258658
type: Gene
SIO_000068: ncbigene

position:61386:-1
position: 61386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61733:-1
position: 61733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61386-61733:-1:exon

T4p111
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: vs
locus tag: T4p111
codon start: 1
transl table: 11
product: valyl tRNA synthetase modifier
translation: MTKILVLCIGLISFSASASADTSYTEIREYVNRTAADYCGKNKACQAEFAQKLIYAYKDGERDKSSRYKNDTLLKRYAKKWNTLECSVAEEKDKAACHSMVDRLVDSYNRGLSTR
SIO_010081: T4p111
subclass of: SO_0000673
so part of: T4p111
location: complement(61386..61733)
location: region:61386-61733:-1
so has part: feature:61386-61733:-1:exon

NP_049724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61386-61733:-1:exon

T4p112
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: vs.2
gene: vs.1
locus tag: T4p112
gene synonym: vs.2
so part of: sequence
location: complement(61726..62271)
location: region:61726-62271:-1
so has part: feature:61726-62271:-1:exon
subclass of: SO_0000010

1258653
type: Gene
SIO_000068: ncbigene

position:61726:-1
position: 61726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62271:-1
position: 62271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61726-62271:-1:exon

T4p112
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: vs.2
gene: vs.1
locus tag: T4p112
gene synonym: vs.2
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKALLAGLLAISMMAHSSEHTFSNVQLDNMRYAYQFGEQFSKDGKYKTHKNIHKSGLGHIMAAILWQESSGGVNLKSKPKHHAYGMFQNYLPTMRARVKELGYNMTDAEIKRMLNKRSNSASWAYIELSYWLNIHKGDIRKAISSYNSGWNVKAGSKYASEVLEKANYLKNNKLLEIVND
SIO_010081: T4p112
subclass of: SO_0000673
so part of: T4p112
location: complement(61726..62271)
location: region:61726-62271:-1
so has part: feature:61726-62271:-1:exon

NP_049725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61726-62271:-1:exon

T4p113
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: regB
locus tag: T4p113
so part of: sequence
location: complement(62279..62740)
location: region:62279-62740:-1
so has part: feature:62279-62740:-1:exon
subclass of: SO_0000010

1258703
type: Gene
SIO_000068: ncbigene

position:62279:-1
position: 62279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62740:-1
position: 62740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62279-62740:-1:exon

T4p113
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: regB
locus tag: T4p113
note: riboendonuclease cleaves a subset of T4 mRNAs at GGAG using r-protein S1 for recognition
codon start: 1
transl table: 11
product: endoribonuclease
translation: MTINTEVFIRRNKLRRHFESEFRQINNEIREASKAAGVSSFHLKYSQHLLDRAIQREIDETYVFELFHKIKDHVLEVNEFLSMPPRPDIDEDFIDGVEYRPGRLEITDGNLWLGFTVCKPNEKFKDPSLQCRMAIINSRRLPGKASKAVIKTQ
SIO_010081: T4p113
subclass of: SO_0000673
so part of: T4p113
location: complement(62279..62740)
location: region:62279-62740:-1
so has part: feature:62279-62740:-1:exon

NP_049726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62279-62740:-1:exon

T4p114
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: vs.3
locus tag: T4p114
so part of: sequence
location: complement(62800..63078)
location: region:62800-63078:-1
so has part: feature:62800-63078:-1:exon
subclass of: SO_0000010

1258747
type: Gene
SIO_000068: ncbigene

position:62800:-1
position: 62800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63078:-1
position: 63078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62800-63078:-1:exon

T4p114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: vs.3
locus tag: T4p114
codon start: 1
transl table: 11
product: Vs.3 conserved hypothetical protein
translation: MAQLSAGFGYEYYTAPRRVSVAPKKIQSLDDFQEVVRNAFQDYARYLKEDSQDCLEEDEIAYYTQRLEQLKNLHEVRAEVSKSMNKLIRFKE
SIO_010081: T4p114
subclass of: SO_0000673
so part of: T4p114
location: complement(62800..63078)
location: region:62800-63078:-1
so has part: feature:62800-63078:-1:exon

NP_049727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62800-63078:-1:exon

T4p115
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: vs.4
locus tag: T4p115
so part of: sequence
location: complement(63078..63344)
location: region:63078-63344:-1
so has part: feature:63078-63344:-1:exon
subclass of: SO_0000010

1258619
type: Gene
SIO_000068: ncbigene

position:63344:-1
position: 63344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63078-63344:-1:exon

T4p115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: vs.4
locus tag: T4p115
codon start: 1
transl table: 11
product: Vs.4 conserved hypothetical protein
translation: MIEDIKGYKPHTEEKIGKVNAIKDAEVRLGLIFDALYDEFWEALDNCEDCEFAKNYAESLDQLTIAKTKLKEASMWACRAVFQPEEKY
SIO_010081: T4p115
subclass of: SO_0000673
so part of: T4p115
location: complement(63078..63344)
location: region:63078-63344:-1
so has part: feature:63078-63344:-1:exon

NP_049728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63078-63344:-1:exon

T4p116
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: vs.5
locus tag: T4p116
so part of: sequence
location: complement(63381..63557)
location: region:63381-63557:-1
so has part: feature:63381-63557:-1:exon
subclass of: SO_0000010

1258660
type: Gene
SIO_000068: ncbigene

position:63381:-1
position: 63381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63557:-1
position: 63557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63381-63557:-1:exon

T4p116
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: vs.5
locus tag: T4p116
codon start: 1
transl table: 11
product: Vs.5 conserved hypothetical protein
translation: MAKIIIEGSEDVLNAFASGLVTQANSNLMKRGIWVILMEFILRQKFLFKAMAFMNLFV
SIO_010081: T4p116
subclass of: SO_0000673
so part of: T4p116
location: complement(63381..63557)
location: region:63381-63557:-1
so has part: feature:63381-63557:-1:exon

NP_049729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63381-63557:-1:exon

T4p117
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: vs.6
locus tag: T4p117
so part of: sequence
location: complement(63557..63919)
location: region:63557-63919:-1
so has part: feature:63557-63919:-1:exon
subclass of: SO_0000010

1258600
type: Gene
SIO_000068: ncbigene

position:63919:-1
position: 63919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63557-63919:-1:exon

T4p117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: vs.6
locus tag: T4p117
codon start: 1
transl table: 11
product: autonomous glycyl radical cofactor GrcA
translation: MKAYQILEGTHKGTIYFEDGIQARIIVSKTFKEDSFVDPEIFYGLHAREIEIEPQPTVKIEGGQHLNVNVLRHETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIARTFTESL
SIO_010081: T4p117
subclass of: SO_0000673
so part of: T4p117
location: complement(63557..63919)
location: region:63557-63919:-1
so has part: feature:63557-63919:-1:exon

NP_049730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63557-63919:-1:exon

T4p118
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: vs.7
locus tag: T4p118
so part of: sequence
location: complement(63927..64256)
location: region:63927-64256:-1
so has part: feature:63927-64256:-1:exon
subclass of: SO_0000010

1258716
type: Gene
SIO_000068: ncbigene

position:63927:-1
position: 63927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64256:-1
position: 64256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63927-64256:-1:exon

T4p118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: vs.7
locus tag: T4p118
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMTDTQLFEYLYFSPKTIKNKLVNHFEILAKNNILSEFYPKQYKLQKGVFKGCRVLCTAPNARLMNKIPYFTMEFIDGPFKGLITQSLMAYDSEPFLIKEQSWINLFSN
SIO_010081: T4p118
subclass of: SO_0000673
so part of: T4p118
location: complement(63927..64256)
location: region:63927-64256:-1
so has part: feature:63927-64256:-1:exon

NP_049731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63927-64256:-1:exon

T4p119
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: vs.8
locus tag: T4p119
so part of: sequence
location: complement(64253..64912)
location: region:64253-64912:-1
so has part: feature:64253-64912:-1:exon
subclass of: SO_0000010

1258713
type: Gene
SIO_000068: ncbigene

position:64253:-1
position: 64253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64912:-1
position: 64912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64253-64912:-1:exon

T4p119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: vs.8
locus tag: T4p119
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDSRQPVIRSSPSAVMGKYRNGQFMCHGMAQTYRAYREEMRTFLTGPYLSLMNAFTHHSDARVEEICKNEYIPPFEDLLKQYCTLRLDGGRQSGKSIAVTNFAANWLYDGGTVIVLSNTSAYAKISANNIKKEFSRYSNDDIRFRLFTDSVRSFIGNKGSKFRGLKLSRILYIIDEPVKSPDMDKIYSVHIDTVHYCCNSKCCIGGITRPQFFVIGMQ
SIO_010081: T4p119
subclass of: SO_0000673
so part of: T4p119
location: complement(64253..64912)
location: region:64253-64912:-1
so has part: feature:64253-64912:-1:exon

NP_049732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64253-64912:-1:exon

T4p120
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: denV
locus tag: T4p120
so part of: sequence
location: complement(64939..65355)
location: region:64939-65355:-1
so has part: feature:64939-65355:-1:exon
subclass of: SO_0000010

1258606
type: Gene
SIO_000068: ncbigene

position:64939:-1
position: 64939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65355:-1
position: 65355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64939-65355:-1:exon

T4p120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: denV
locus tag: T4p120
note: bifunctional N-glycosylase and DNA endonulcease for repair of pyrimidine dimers
codon start: 1
transl table: 11
product: endonuclease V N-glycosylase UV repair enzyme
translation: MTRINLTLVSELADQHLMAEYRELPRVFGAVRKHVANGKRVRDFKISPTFILGAGHVTFFYDKLEFLRKRQIELIAECLKRGFNIKDTTVQDISDIPQEFRGDYIPHEASIAISQARLDEKIAQRPTWYKYYGKAIYA
SIO_010081: T4p120
subclass of: SO_0000673
so part of: T4p120
location: complement(64939..65355)
location: region:64939-65355:-1
so has part: feature:64939-65355:-1:exon

NP_049733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64939-65355:-1:exon

T4p121
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: ipII
locus tag: T4p121
so part of: sequence
location: complement(65416..65718)
location: region:65416-65718:-1
so has part: feature:65416-65718:-1:exon
subclass of: SO_0000010

1258729
type: Gene
SIO_000068: ncbigene

position:65416:-1
position: 65416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65718:-1
position: 65718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65416-65718:-1:exon

T4p121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: ipII
locus tag: T4p121
codon start: 1
transl table: 11
product: internal virion protein
translation: MKTYQEFIAEARVGAGKLEAAVNKKAHSFHDLPDKDRKKLVSLYIDRERILALPGANEGKQAKPLNAVEKKIDNFASKFGMSMDDLQQAAIEAAKAIKDK
SIO_010081: T4p121
subclass of: SO_0000673
so part of: T4p121
location: complement(65416..65718)
location: region:65416-65718:-1
so has part: feature:65416-65718:-1:exon

NP_049734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65416-65718:-1:exon

T4p122
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: ipIII
locus tag: T4p122
so part of: sequence
location: complement(65834..66415)
location: region:65834-66415:-1
so has part: feature:65834-66415:-1:exon
subclass of: SO_0000010

1258595
type: Gene
SIO_000068: ncbigene

position:65834:-1
position: 65834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66415:-1
position: 66415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65834-66415:-1:exon

T4p122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: ipIII
locus tag: T4p122
codon start: 1
transl table: 11
product: internal virion protein
translation: MKTYQEFIAEASVVKAKGINKDEWTYRSGNGFDPKTAPIERYLATKASDFKAFAWEGLRWRTDLNIEVDGLKFAHIEDVVASNLDSEFVKADADLRRWNLKLFSKQKGPKFVPKAGKWVIDNKLAKAVNFAGLEFAKHKSSWKGLDAMAFRKEFADVMTKGGFKAEIDTSKGKFKDANIQYAYAVANAARGNS
SIO_010081: T4p122
subclass of: SO_0000673
so part of: T4p122
location: complement(65834..66415)
location: region:65834-66415:-1
so has part: feature:65834-66415:-1:exon

NP_049735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65834-66415:-1:exon

T4p123
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: e
locus tag: T4p123
so part of: sequence
location: complement(66503..66997)
location: region:66503-66997:-1
so has part: feature:66503-66997:-1:exon
subclass of: SO_0000010

1258585
type: Gene
SIO_000068: ncbigene

position:66503:-1
position: 66503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66997:-1
position: 66997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66503-66997:-1:exon

T4p123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: e
locus tag: T4p123
note: intracellular N-acetyl muramidase; lysis from within
codon start: 1
transl table: 11
product: glycoside hydrolase family protein
translation: MNIFEMLRIDERLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSIWYNQTPNRAKRVITTFRTGTWDAYKNL
SIO_010081: T4p123
subclass of: SO_0000673
so part of: T4p123
location: complement(66503..66997)
location: region:66503-66997:-1
so has part: feature:66503-66997:-1:exon

NP_049736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66503-66997:-1:exon

T4p124
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: e.1
gene: nudE
locus tag: T4p124
gene synonym: e.1
so part of: sequence
location: complement(67035..67490)
location: region:67035-67490:-1
so has part: feature:67035-67490:-1:exon
subclass of: SO_0000010

1258692
type: Gene
SIO_000068: ncbigene

position:67035:-1
position: 67035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67490:-1
position: 67490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67035-67490:-1:exon

T4p124
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: e.1
gene: nudE
locus tag: T4p124
gene synonym: e.1
note: nudix hydrolase active on FAD, diadenosine polyphosphates, ADP-ribose and NADH
codon start: 1
transl table: 11
product: nudix hydrolase
translation: MQEIKMKTLSAGIIFMTEDKDLFMGRVTGSRKTGMMAHRWDIPKGRVENSDLSALDAARRECLEETGFSNYNPDLLEDLGVFKYSSNKDLQLFYYTIPVEHEMFRNCRCESYFENKDGVMIPEMDAFALIPRTQWQYVMGPSLYRIMNNLF
SIO_010081: T4p124
subclass of: SO_0000673
so part of: T4p124
location: complement(67035..67490)
location: region:67035-67490:-1
so has part: feature:67035-67490:-1:exon

NP_049737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67035-67490:-1:exon

T4p125
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: e.2
locus tag: T4p125
so part of: sequence
location: complement(67652..67960)
location: region:67652-67960:-1
so has part: feature:67652-67960:-1:exon
subclass of: SO_0000010

1258614
type: Gene
SIO_000068: ncbigene

position:67652:-1
position: 67652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67960:-1
position: 67960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67652-67960:-1:exon

T4p125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: e.2
locus tag: T4p125
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILKTRWYDLDDGDDGIPVDRVDWNGCSEDTKKRLIREFRMGYQAAKPFTVTDDKFVCIQNGRAKLTNADWFTDKKVLLWYIISLPISSFVFYFFIKIQWTE
SIO_010081: T4p125
subclass of: SO_0000673
so part of: T4p125
location: complement(67652..67960)
location: region:67652-67960:-1
so has part: feature:67652-67960:-1:exon

NP_049738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67652-67960:-1:exon

T4p126
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: e.3
locus tag: T4p126
so part of: sequence
location: complement(67957..68319)
location: region:67957-68319:-1
so has part: feature:67957-68319:-1:exon
subclass of: SO_0000010

1258686
type: Gene
SIO_000068: ncbigene

position:67957:-1
position: 67957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68319:-1
position: 68319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67957-68319:-1:exon

T4p126
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: e.3
locus tag: T4p126
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKPKLNKVKYSFSESFLIFAVALAAALTGSLIGLLIDCFILKISGTVDIIEVWSELCYTKIISLFSFFGIILYFHYDNFKINWQRKKDYKIQLKEYNSYMSYIENESMKEFVIDCRKIK
SIO_010081: T4p126
subclass of: SO_0000673
so part of: T4p126
location: complement(67957..68319)
location: region:67957-68319:-1
so has part: feature:67957-68319:-1:exon

NP_049739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67957-68319:-1:exon

T4p127
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: e.4
locus tag: T4p127
so part of: sequence
location: complement(68301..68693)
location: region:68301-68693:-1
so has part: feature:68301-68693:-1:exon
subclass of: SO_0000010

1258546
type: Gene
SIO_000068: ncbigene

position:68301:-1
position: 68301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68693:-1
position: 68693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68301-68693:-1:exon

T4p127
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: e.4
locus tag: T4p127
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKPSLYLPSKPLKYELKRQIISTDVLIGPVIAISFVILLIIGGVLDVMTDIDSGVIIMLMLTLPLVVPFLLVPVNWIGYWYQGRHYRKRVRDWKAQCKKIKKEHQLKLAEYEFNEIMKFVKESRCKSQS
SIO_010081: T4p127
subclass of: SO_0000673
so part of: T4p127
location: complement(68301..68693)
location: region:68301-68693:-1
so has part: feature:68301-68693:-1:exon

NP_049740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68301-68693:-1:exon

T4p128
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: e.5
locus tag: T4p128
so part of: sequence
location: complement(68662..69270)
location: region:68662-69270:-1
so has part: feature:68662-69270:-1:exon
subclass of: SO_0000010

1258745
type: Gene
SIO_000068: ncbigene

position:68662:-1
position: 68662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69270:-1
position: 69270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68662-69270:-1:exon

T4p128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: e.5
locus tag: T4p128
codon start: 1
transl table: 11
product: e.5 conserved hypothetical protein
translation: MKMQSDFNSMFEEFQRHVDVPDQLLNALKHMAKGRNYYWGSSYETDESLSGRFSRGKKSLIRPGILINSIESIHSLTCDFDVEFTDFISPEWSVCYLNDDFDYLGVYSLSDAWFKRNLQKSNLFYIDTTVKFQGKKYFFTLIVDSETKHENKRILSKRNILNIVDDLFDKLVENPNFESDLLLEKFVKECREYVKAITIPSK
SIO_010081: T4p128
subclass of: SO_0000673
so part of: T4p128
location: complement(68662..69270)
location: region:68662-69270:-1
so has part: feature:68662-69270:-1:exon

NP_049741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68662-69270:-1:exon

T4p129
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: e.6
locus tag: T4p129
so part of: sequence
location: complement(69312..69905)
location: region:69312-69905:-1
so has part: feature:69312-69905:-1:exon
subclass of: SO_0000010

1258634
type: Gene
SIO_000068: ncbigene

position:69312:-1
position: 69312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69905:-1
position: 69905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69312-69905:-1:exon

T4p129
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: e.6
locus tag: T4p129
codon start: 1
transl table: 11
product: e.6 conserved hypothetical protein
translation: MNTLKKIVEFIRTKLGSAMAKNLSVEEQYTAAAAKLLDKIKDLKTASVKSINEEKRIRELIVEKNKQAESKEREIRKLLSEGQDVTMHAKLGLLYRRTAEQLTTKADGYAEMRIEIAKKVVELDDARQELAVKLEYIRETRAANALGISTADDVVEIAALTKVDIEDTLARVETFNGNISGVETTSADVQEYINSLK
SIO_010081: T4p129
subclass of: SO_0000673
so part of: T4p129
location: complement(69312..69905)
location: region:69312-69905:-1
so has part: feature:69312-69905:-1:exon

NP_049742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69312-69905:-1:exon

T4p130
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: e.7
locus tag: T4p130
so part of: sequence
location: complement(69968..70303)
location: region:69968-70303:-1
so has part: feature:69968-70303:-1:exon
subclass of: SO_0000010

1258604
type: Gene
SIO_000068: ncbigene

position:69968:-1
position: 69968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70303:-1
position: 70303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69968-70303:-1:exon

T4p130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: e.7
locus tag: T4p130
codon start: 1
transl table: 11
product: e.7 hypothetical protein
translation: MKRNFSKAFCNRNNYPEELFESKDFKEFNERSQNMPVQWVLDYAKRIFEGVRDICPDDEAPYFKKAWELVNQAYINALESSKGTDDDFILLAINDAIIEAINAFIDELDEE
SIO_010081: T4p130
subclass of: SO_0000673
so part of: T4p130
location: complement(69968..70303)
location: region:69968-70303:-1
so has part: feature:69968-70303:-1:exon

NP_049743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69968-70303:-1:exon

unsure
type: Feature
subclass of: SO_0000001
RO_0002162: 2681598
note: non-coding region between the -10 and -35 region of the early promoter Pe70323
replace: c
replace: g
so part of: sequence
location: 70346
location: region:70346-70346:1
so has part: feature:70346-70346:1:region

position:70346:1
position: 70346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70346-70346:1:region

T4p131
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: e.8
locus tag: T4p131
so part of: sequence
location: complement(70360..70623)
location: region:70360-70623:-1
so has part: feature:70360-70623:-1:exon
subclass of: SO_0000010

1258598
type: Gene
SIO_000068: ncbigene

position:70360:-1
position: 70360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70623:-1
position: 70623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70360-70623:-1:exon

T4p131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: e.8
locus tag: T4p131
codon start: 1
transl table: 11
product: e.8 conserved hypothetical protein
translation: MDNYGELFNFFMKCVSEDFGRTVNDIKVIGPDHPMFETYAVMGNEDGQWYTVKVVINMFTAESYVKLSSKVYHDNDEIAEEYFNNMK
SIO_010081: T4p131
subclass of: SO_0000673
so part of: T4p131
location: complement(70360..70623)
location: region:70360-70623:-1
so has part: feature:70360-70623:-1:exon

NP_049744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70360-70623:-1:exon

T4s001
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4s001
so part of: sequence
location: complement(70908..71046)
location: region:70908-71046:-1
so has part: feature:70908-71046:-1:exon

1258654
type: Gene
SIO_000068: ncbigene

position:70908:-1
position: 70908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71046:-1
position: 71046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70908-71046:-1:exon

T4s001
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2681598
locus tag: T4s001
product: rnaC
note: small, stable RNA; species 1 RNA
SIO_010081: T4s001
so part of: T4s001
location: complement(70908..71046)
location: region:70908-71046:-1
so has part: feature:70908-71046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70908-71046:-1:exon

T4s002
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4s002
so part of: sequence
location: complement(71053..71171)
location: region:71053-71171:-1
so has part: feature:71053-71171:-1:exon

1258626
type: Gene
SIO_000068: ncbigene

position:71053:-1
position: 71053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71171:-1
position: 71171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71053-71171:-1:exon

T4s002
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2681598
locus tag: T4s002
product: rnaD
note: small, stable RNA; species 2 RNA
SIO_010081: T4s002
so part of: T4s002
location: complement(71053..71171)
location: region:71053-71171:-1
so has part: feature:71053-71171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71053-71171:-1:exon

T4t001
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4t001
so part of: sequence
location: complement(71173..71247)
location: region:71173-71247:-1
so has part: feature:71173-71247:-1:exon
subclass of: SO_0000663

1258622
type: Gene
SIO_000068: ncbigene

position:71173:-1
position: 71173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71247:-1
position: 71247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71173-71247:-1:exon

T4t001
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2681598
locus tag: T4t001
product: tRNA-Arg
note: tRNAR; arginyl-tRNA
SIO_010081: T4t001
subclass of: SO_0000673
so part of: T4t001
location: complement(71173..71247)
location: region:71173-71247:-1
so has part: feature:71173-71247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71173-71247:-1:exon

T4p132
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: tRNA.1
gene: segB
locus tag: T4p132
gene synonym: tRNA.1
so part of: sequence
location: complement(71253..71918)
location: region:71253-71918:-1
so has part: feature:71253-71918:-1:exon
subclass of: SO_0000010

1258659
type: Gene
SIO_000068: ncbigene

position:71253:-1
position: 71253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71918:-1
position: 71918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71253-71918:-1:exon

T4p132
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: tRNA.1
gene: segB
locus tag: T4p132
gene synonym: tRNA.1
note: site-specific homing DNA endonuclease; GIY-YIG family
codon start: 1
transl table: 11
product: homing endonuclease
translation: MFYYTYKITNKINNKIYIGVHSTENLDDGYMGSGKLLKRAQDKYGIENFSKEILEYFDDKESMLEAEKNIVTEEFLNRPDVYNLKLGGEGGWDHVNIPGMLNQKKDASLKGAKSFKSRFENDILLQEKYRKIGSNVFKRLWSTPEYREKFLNNSRFLNKHHTPETINKMKESHAKNNHQKGEKNSQFGMMWIHSLDEKVSKRIKKTDPIPEGWFKGRKMKF
SIO_010081: T4p132
subclass of: SO_0000673
so part of: T4p132
location: complement(71253..71918)
location: region:71253-71918:-1
so has part: feature:71253-71918:-1:exon

NP_049745.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71253-71918:-1:exon

T4t002
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4t002
so part of: sequence
location: complement(71960..72033)
location: region:71960-72033:-1
so has part: feature:71960-72033:-1:exon
subclass of: SO_0000663

1258648
type: Gene
SIO_000068: ncbigene

position:71960:-1
position: 71960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72033:-1
position: 72033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71960-72033:-1:exon

T4t002
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2681598
locus tag: T4t002
product: tRNA-Ile
note: tRNAI; isoleucyl-tRNA
SIO_010081: T4t002
subclass of: SO_0000673
so part of: T4t002
location: complement(71960..72033)
location: region:71960-72033:-1
so has part: feature:71960-72033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71960-72033:-1:exon

T4t003
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4t003
so part of: sequence
location: complement(72035..72110)
location: region:72035-72110:-1
so has part: feature:72035-72110:-1:exon
subclass of: SO_0000663

1258594
type: Gene
SIO_000068: ncbigene

position:72035:-1
position: 72035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72110:-1
position: 72110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72035-72110:-1:exon

T4t003
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2681598
locus tag: T4t003
product: tRNA-Thr
note: tRNAT; threonyl-tRNA
SIO_010081: T4t003
subclass of: SO_0000673
so part of: T4t003
location: complement(72035..72110)
location: region:72035-72110:-1
so has part: feature:72035-72110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72035-72110:-1:exon

T4t004
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4t004
so part of: sequence
location: complement(72118..72204)
location: region:72118-72204:-1
so has part: feature:72118-72204:-1:exon
subclass of: SO_0000663

1258613
type: Gene
SIO_000068: ncbigene

position:72118:-1
position: 72118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72204:-1
position: 72204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72118-72204:-1:exon

T4t004
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2681598
locus tag: T4t004
product: tRNA-Ser
note: tRNAS; serinyl-tRNA
SIO_010081: T4t004
subclass of: SO_0000673
so part of: T4t004
location: complement(72118..72204)
location: region:72118-72204:-1
so has part: feature:72118-72204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72118-72204:-1:exon

T4t005
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4t005
so part of: sequence
location: complement(72207..72280)
location: region:72207-72280:-1
so has part: feature:72207-72280:-1:exon
subclass of: SO_0000663

1258572
type: Gene
SIO_000068: ncbigene

position:72207:-1
position: 72207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72280:-1
position: 72280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72207-72280:-1:exon

T4t005
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2681598
locus tag: T4t005
product: tRNA-Pro
note: tRNAP; prolyl-tRNA
SIO_010081: T4t005
subclass of: SO_0000673
so part of: T4t005
location: complement(72207..72280)
location: region:72207-72280:-1
so has part: feature:72207-72280:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72207-72280:-1:exon

T4t006
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4t006
so part of: sequence
location: complement(72291..72364)
location: region:72291-72364:-1
so has part: feature:72291-72364:-1:exon
subclass of: SO_0000663

1258812
type: Gene
SIO_000068: ncbigene

position:72291:-1
position: 72291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72364:-1
position: 72364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72291-72364:-1:exon

T4t006
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2681598
locus tag: T4t006
product: tRNA-Gly
note: tRNAG; glycyl-tRNA
SIO_010081: T4t006
subclass of: SO_0000673
so part of: T4t006
location: complement(72291..72364)
location: region:72291-72364:-1
so has part: feature:72291-72364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72291-72364:-1:exon

T4t007
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4t007
so part of: sequence
location: complement(72370..72456)
location: region:72370-72456:-1
so has part: feature:72370-72456:-1:exon
subclass of: SO_0000663

1258810
type: Gene
SIO_000068: ncbigene

position:72370:-1
position: 72370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72456:-1
position: 72456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72370-72456:-1:exon

T4t007
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2681598
locus tag: T4t007
product: tRNA-Leu
note: tRNAL; leucyl-tRNA
SIO_010081: T4t007
subclass of: SO_0000673
so part of: T4t007
location: complement(72370..72456)
location: region:72370-72456:-1
so has part: feature:72370-72456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72370-72456:-1:exon

T4t008
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
locus tag: T4t008
so part of: sequence
location: complement(72458..72530)
location: region:72458-72530:-1
so has part: feature:72458-72530:-1:exon
subclass of: SO_0000663

1258575
type: Gene
SIO_000068: ncbigene

position:72458:-1
position: 72458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72530:-1
position: 72530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72458-72530:-1:exon

T4t008
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2681598
locus tag: T4t008
product: tRNA-Gln
note: tRNAQ; glutaminyl-tRNA
SIO_010081: T4t008
subclass of: SO_0000673
so part of: T4t008
location: complement(72458..72530)
location: region:72458-72530:-1
so has part: feature:72458-72530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72458-72530:-1:exon

T4p133
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: trna.2
locus tag: T4p133
so part of: sequence
location: complement(72628..72915)
location: region:72628-72915:-1
so has part: feature:72628-72915:-1:exon
subclass of: SO_0000010

1258580
type: Gene
SIO_000068: ncbigene

position:72628:-1
position: 72628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72915:-1
position: 72915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72628-72915:-1:exon

T4p133
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: trna.2
locus tag: T4p133
codon start: 1
transl table: 11
product: Trna.2 conserved hypothetical protein
translation: MILYAKVSSVENGYKYDQEAAKALIDDYGILTCFEVEKVYIDRSSSQVKLVKEDRKFNTVNFDFFIETEKGPLEYDIFKNPLGLECIVNTYHHKW
SIO_010081: T4p133
subclass of: SO_0000673
so part of: T4p133
location: complement(72628..72915)
location: region:72628-72915:-1
so has part: feature:72628-72915:-1:exon

NP_049746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72628-72915:-1:exon

T4p134
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: trna.3
locus tag: T4p134
so part of: sequence
location: complement(72918..73328)
location: region:72918-73328:-1
so has part: feature:72918-73328:-1:exon
subclass of: SO_0000010

1258589
type: Gene
SIO_000068: ncbigene

position:72918:-1
position: 72918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73328:-1
position: 73328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72918-73328:-1:exon

T4p134
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: trna.3
locus tag: T4p134
codon start: 1
transl table: 11
product: Trna.3 conserved hypothetical protein
translation: MSINEYYVYAGDYANPSHFEGNLIPDKVFNTPFEAWSWIESKNGFSYRYVEVTDWRGTKYPKDHYYVNPSKVNFLLFAGDNYYPCGGYDDLIAYAETEDKLRDIIKENENKPDYGSNRFDWWQIVNAHTHAIVDRG
SIO_010081: T4p134
subclass of: SO_0000673
so part of: T4p134
location: complement(72918..73328)
location: region:72918-73328:-1
so has part: feature:72918-73328:-1:exon

NP_049747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72918-73328:-1:exon

T4p135
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: trna.4
locus tag: T4p135
so part of: sequence
location: complement(73329..73514)
location: region:73329-73514:-1
so has part: feature:73329-73514:-1:exon
subclass of: SO_0000010

1258608
type: Gene
SIO_000068: ncbigene

position:73329:-1
position: 73329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73514:-1
position: 73514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73329-73514:-1:exon

T4p135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: trna.4
locus tag: T4p135
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRCELIRNVAIAISASAFSFSMFVGFICGLLTTAENVFSLVVAFLIGLIAIVMDKISKGE
SIO_010081: T4p135
subclass of: SO_0000673
so part of: T4p135
location: complement(73329..73514)
location: region:73329-73514:-1
so has part: feature:73329-73514:-1:exon

NP_049748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73329-73514:-1:exon

T4p136
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: ipI
locus tag: T4p136
so part of: sequence
location: complement(73591..73878)
location: region:73591-73878:-1
so has part: feature:73591-73878:-1:exon
subclass of: SO_0000010

1258561
type: Gene
SIO_000068: ncbigene

position:73591:-1
position: 73591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73878:-1
position: 73878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73591-73878:-1:exon

T4p136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: ipI
locus tag: T4p136
codon start: 1
transl table: 11
product: internal virion protein
translation: MKTFKEFTSTTTPVSTITEATLTSEVIKANKGREGKPMISLVDGEEIKGTVYLGDGWSAKKDGATIVISPAEETALFKAKHISAAHLKIIAKNLL
SIO_010081: T4p136
subclass of: SO_0000673
so part of: T4p136
location: complement(73591..73878)
location: region:73591-73878:-1
so has part: feature:73591-73878:-1:exon

NP_049749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73591-73878:-1:exon

T4p137
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 57B
locus tag: T4p137
so part of: sequence
location: complement(73952..74410)
location: region:73952-74410:-1
so has part: feature:73952-74410:-1:exon
subclass of: SO_0000010

1258596
type: Gene
SIO_000068: ncbigene

position:73952:-1
position: 73952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74410:-1
position: 74410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73952-74410:-1:exon

T4p137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 57B
locus tag: T4p137
codon start: 1
transl table: 11
product: RNA ligase
translation: MMEFKDFSTGLYVAAKFSELTLDALEELQRSLRVPNPVPREKIHSTICYSRVNVPYVPSSGSFEVASSGHLEVWKTQDGSTLVLVLDSEYLRCRHMYARALGATHDFDDYTPHITLSYNVGPLSFSGDVQIPVVLDREYKEPLKLDWADDLK
SIO_010081: T4p137
subclass of: SO_0000673
so part of: T4p137
location: complement(73952..74410)
location: region:73952-74410:-1
so has part: feature:73952-74410:-1:exon

NP_049750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73952-74410:-1:exon

T4p138
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 57A
locus tag: T4p138
so part of: sequence
location: complement(74407..74649)
location: region:74407-74649:-1
so has part: feature:74407-74649:-1:exon
subclass of: SO_0000010

1258624
type: Gene
SIO_000068: ncbigene

position:74407:-1
position: 74407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74649:-1
position: 74649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74407-74649:-1:exon

T4p138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 57A
locus tag: T4p138
note: molecular chaperone for both short and long tail fibers
codon start: 1
transl table: 11
product: tail fiber chaperone
translation: MSEQTVEQKLSAEIVTLKSRILDTQDQAARLMEESKILQGTLAEIARAVGITGDTIKVEEIVEAVKNLTAESADEAKDEE
SIO_010081: T4p138
subclass of: SO_0000673
so part of: T4p138
location: complement(74407..74649)
location: region:74407-74649:-1
so has part: feature:74407-74649:-1:exon

NP_049751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74407-74649:-1:exon

T4p139
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 1
locus tag: T4p139
so part of: sequence
location: complement(74649..75374)
location: region:74649-75374:-1
so has part: feature:74649-75374:-1:exon
subclass of: SO_0000010

1258557
type: Gene
SIO_000068: ncbigene

position:75374:-1
position: 75374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74649-75374:-1:exon

T4p139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 1
locus tag: T4p139
note: converts dTMP, dGMP and HMdCMP to diphosphates, not active on dAMP or dCMP; gp1; catalyses the phosphorylation of canonical nucleotides to the corresponding diphosphates using ATP as a phosphate donor; recognizes three structurally dissimilar nucleotides: dGMP, dTMP and 5-hydroxymethyl-dCMP while excluding dCMP and dAMP
codon start: 1
transl table: 11
product: deoxynucleoside monophosphate kinase
translation: MKLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDALAYAWGVFAANTDYPCLTRKEFEGIDYDRETNLNLTKLEVITIMEQAFCYLNGKSPIKGVFVFDDEGKESVNFVAFNKITDVINNIEDQWSVRRLMQALGTDLIVNNFDRMYWVKLFALDYLDKFNSGYDYYIVPDTRQDHEMDAARAMGATVIHVVRPGQKSNDTHITEAGLPIRDGDLVITNDGSLEELFSKIKNTLKVL
SIO_010081: T4p139
subclass of: SO_0000673
so part of: T4p139
location: complement(74649..75374)
location: region:74649-75374:-1
so has part: feature:74649-75374:-1:exon

NP_049752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74649-75374:-1:exon

T4p140
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 3
locus tag: T4p140
so part of: sequence
location: complement(75424..75954)
location: region:75424-75954:-1
so has part: feature:75424-75954:-1:exon
subclass of: SO_0000010

1258776
type: Gene
SIO_000068: ncbigene

position:75424:-1
position: 75424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75954:-1
position: 75954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75424-75954:-1:exon

T4p140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 3
locus tag: T4p140
note: tail sheath stabilizer, terminator; gp3; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; gp3 is localized to the tail tube in mature virions
codon start: 1
transl table: 11
product: tail protein
translation: MSQALQQIFNQANTTNFVVSIPHSNTTSAFTLNAQSVPIPGIRIPVTDTVTGPFGLGRAQRPGVTFEYDPLIVRFIVDEELKSWIGMYEWMLGTSNYLTGENTAQKTGPEYITLYILDNSKTEIVMSINFYKPWVSDLSEVEFSYTEDSDPALVCTATIPYTYFQVEKDGKIIAEV
SIO_010081: T4p140
subclass of: SO_0000673
so part of: T4p140
location: complement(75424..75954)
location: region:75424-75954:-1
so has part: feature:75424-75954:-1:exon

NP_049753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75424-75954:-1:exon

T4p141
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 64
gene: 2
locus tag: T4p141
gene synonym: 64
so part of: sequence
location: complement(76061..76885)
location: region:76061-76885:-1
so has part: feature:76061-76885:-1:exon
subclass of: SO_0000010

1258799
type: Gene
SIO_000068: ncbigene

position:76061:-1
position: 76061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76885:-1
position: 76885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76061-76885:-1:exon

T4p141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 64
gene: 2
locus tag: T4p141
gene synonym: 64
note: DNA end binding and protection; gp2; protects injected phage DNA ends from degradation by exonuclease V; involved in DNA end joining
codon start: 1
transl table: 11
product: DNA end protector
translation: MAIFQIINESTPQVPKVKQSLNEKKWIQIGLEYKKAKAKGMTGKQFAEERGIKYSTFTSAMSKYASGIKTAEKIQKLESKPMNKLNKQERQLLMINSFRQTLRDKIRNEGAAINNKTRKWFAETIKQVKGHKVVRPQPGRIYAFAYDAKHKETLPYWDKFPLIIYLGLGKHNLMYGLNLHYIPPKARQQFLEELLKQYANTPTITNKTKLKIDWSQVKGFRGADQMIKAYIPGNIMGSLVEIAPKDWANVVLMPLQQFVSKGKRFSANKVWSNI
SIO_010081: T4p141
subclass of: SO_0000673
so part of: T4p141
location: complement(76061..76885)
location: region:76061-76885:-1
so has part: feature:76061-76885:-1:exon

NP_049754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76061-76885:-1:exon

T4p142
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 50
alternative label: 65
gene: 4
locus tag: T4p142
gene synonym: 50; 65
so part of: sequence
location: complement(76885..77337)
location: region:76885-77337:-1
so has part: feature:76885-77337:-1:exon
subclass of: SO_0000010

1258590
type: Gene
SIO_000068: ncbigene

position:77337:-1
position: 77337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76885-77337:-1:exon

T4p142
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 50
alternative label: 65
gene: 4
locus tag: T4p142
gene synonym: 50; 65
note: gp4; gp50; gp65; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the virion head goes through several maturation steps including the construction of the prohead, enzymatic processing of the prohead, and DNA packaging; gp4 is thought to participate in the final steps of head maturation, prior to the attachment of the virion tail
codon start: 1
transl table: 11
product: head closure
translation: MAYSGKWVPKNISKYRGDPKKITYRSNWEKFFFEWLDKNPEIIAWGSETAVIPYFCNAEGKKRRYFMDIWMKDSSGQEFFIEIKPKKETQPPVKPAHLTTAAKKRFMNEIYTWSVNTDKWKAAQSLAEKRGIKFRILTEDGLRALGFKGA
SIO_010081: T4p142
subclass of: SO_0000673
so part of: T4p142
location: complement(76885..77337)
location: region:76885-77337:-1
so has part: feature:76885-77337:-1:exon

NP_049755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76885-77337:-1:exon

T4p143
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 53
locus tag: T4p143
so part of: sequence
location: 77385..77975
location: region:77385-77975:1
so has part: feature:77385-77975:1:exon
subclass of: SO_0000010

1258693
type: Gene
SIO_000068: ncbigene

position:77385:1
position: 77385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77975:1
position: 77975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77385-77975:1:exon

T4p143
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 53
locus tag: T4p143
note: gp53; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid contractile tail consists of a contractile outer sheath, a inner tube, and a baseplate; gp53 is a component of the baseplate
codon start: 1
transl table: 11
product: baseplate wedge subunit
translation: MLFTFFDPIEYAAKTVNKNAPTIPMTDIFRNYKDYFKRALAGYRLRTYYIKGSPRPEELANAIYGNPQLYWVLLMCNDNYDPYYGWITSQEAAYQASIQKYKNVGGDQIVYHVNENGEKFYNLISYDDNPYVWYDKGDKARKYPQYEGALAAVDTYEAAVLENEKLRQIKIIAKSDINSFMNDLIRIMEKSYGNDK
SIO_010081: T4p143
subclass of: SO_0000673
so part of: T4p143
location: 77385..77975
location: region:77385-77975:1
so has part: feature:77385-77975:1:exon

NP_049756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77385-77975:1:exon

T4p144
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 5
locus tag: T4p144
so part of: sequence
location: 77959..79686
location: region:77959-79686:1
so has part: feature:77959-79686:1:exon
subclass of: SO_0000010

1258817
type: Gene
SIO_000068: ncbigene

position:77959:1
position: 77959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79686:1
position: 79686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77959-79686:1:exon

T4p144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 5
locus tag: T4p144
note: tail lysozyme for penetration during infection and lysis from without; gp5; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp5 is a component of the hub; during infection, gp5 helps to digest the peptidoglycan layer of the bacterial cell, so that the DNA can be injected into the host cell
codon start: 1
transl table: 11
product: baseplate hub subunit and tail lysozyme
translation: MEMISNNLNWFVGVVEDRMDPLKLGRVRVRVVGLHPPQRAQGDVMGIPTEKLPWMSVIQPITSAAMSGIGGSVTGPVEGTRVYGHFLDKWKTNGIVLGTYGGIVREKPNRLEGFSDPTGQYPRRLGNDTNVLNQGGEVGYDSSSNVIQDSNLDTAINPDDRPLSEIPTDDNPNMSMAEMLRRDEGLRLKVYWDTEGYPTIGIGHLIMKQPVRDMAQINKVLSKQVGREITGNPGSITMEEATTLFERDLADMQRDIKSHSKVGPVWQAVNRSRQMALENMAFQMGVGGVAKFNTMLTAMLAGDWEKAYKAGRDSLWYQQTKGRASRVTMIILTGNLESYGVEVKTPARSLSAMAATVAKSSDPADPPIPNDSRILFKEPVSSYKGEYPYVHTMETESGHIQEFDDTPGQERYRLVHPTGTYEEVSPSGRRTRKTVDNLYDITNADGNFLVAGDKKTNVGGSEIYYNMDNRLHQIDGSNTIFVRGDETKTVEGNGTILVKGNVTIIVEGNADITVKGDATTLVEGNQTNTVNGNLSWKVAGTVDWDVGGDWTEKMASMSSISSGQYTIDGSRIDIG
SIO_010081: T4p144
subclass of: SO_0000673
so part of: T4p144
location: 77959..79686
location: region:77959-79686:1
so has part: feature:77959-79686:1:exon

NP_049757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77959-79686:1:exon

T4p145
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: repEB
locus tag: T4p145
so part of: sequence
location: complement(77981..78118)
location: region:77981-78118:-1
so has part: feature:77981-78118:-1:exon
subclass of: SO_0000010

1258816
type: Gene
SIO_000068: ncbigene

position:77981:-1
position: 77981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78118:-1
position: 78118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77981-78118:-1:exon

T4p145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: repEB
locus tag: T4p145
codon start: 1
transl table: 11
product: replication initiation protein
translation: MVIFQLEYPLHHLVLFEVDADQPHEHEHDLILMGPFYLQQHRQTN
SIO_010081: T4p145
subclass of: SO_0000673
so part of: T4p145
location: complement(77981..78118)
location: region:77981-78118:-1
so has part: feature:77981-78118:-1:exon

NP_049758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77981-78118:-1:exon

T4p146
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: repEA
locus tag: T4p146
so part of: sequence
location: complement(79085..79237)
location: region:79085-79237:-1
so has part: feature:79085-79237:-1:exon
subclass of: SO_0000010

1258819
type: Gene
SIO_000068: ncbigene

position:79085:-1
position: 79085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79237:-1
position: 79237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79085-79237:-1:exon

T4p146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: repEA
locus tag: T4p146
codon start: 1
transl table: 11
product: replication initiation protein
translation: MVILLHKFQLDELIYIVLAQGYHQIPEYVRFQFPLYAHKDIHLYMKKLVL
SIO_010081: T4p146
subclass of: SO_0000673
so part of: T4p146
location: complement(79085..79237)
location: region:79085-79237:-1
so has part: feature:79085-79237:-1:exon

NP_049759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79085-79237:-1:exon

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 2681598
note: DNA replication origin oriE; (-) strand direction; primer RNA is complement of gene 5 transcript; effective origin placed at 50 bases from start of early transcript from promoter Pe79405; also see repEB, repEA proteins
so part of: sequence
location: 79355
location: region:79355-79355:1
so has part: feature:79355-79355:1:region

position:79355:1
position: 79355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79355-79355:1:region

T4p147
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 5.1
locus tag: T4p147
so part of: sequence
location: 79721..80215
location: region:79721-80215:1
so has part: feature:79721-80215:1:exon
subclass of: SO_0000010

1258586
type: Gene
SIO_000068: ncbigene

position:79721:1
position: 79721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80215:1
position: 80215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79721-80215:1:exon

T4p147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 5.1
locus tag: T4p147
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEGSSIDVTFTAQLETGETLVSINITSYEETPGVLVEENRLYGTYESVFGFGNDALKYRLGDEFKTAASWEELPTDSDTQLYLWKAPQNLQKTFTYEVTLIYDYQEQSESGGSGSNSRSSSDTTEPTDPPAPVRKTLVKNYTKTIVGNWSRWANKLRKYAYARP
SIO_010081: T4p147
subclass of: SO_0000673
so part of: T4p147
location: 79721..80215
location: region:79721-80215:1
so has part: feature:79721-80215:1:exon

NP_049760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79721-80215:1:exon

T4p148
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: segC
locus tag: T4p148
so part of: sequence
location: 80196..80618
location: region:80196-80618:1
so has part: feature:80196-80618:1:exon
subclass of: SO_0000010

1258721
type: Gene
SIO_000068: ncbigene

position:80196:1
position: 80196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80618:1
position: 80618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80196-80618:1:exon

T4p148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: segC
locus tag: T4p148
note: site-specific DNA endonuclease; GIY-YIG family
codon start: 1
transl table: 11
product: homing endonuclease
translation: MPMQDHKYFYLYSITNKTTEKIYVGVHKTSNLDDGYMGSGVAIKNAIKKYGIDNFYKHIIKFFESEKAMYDAEAEIVTEEFVKSKKTYNMKLGGIGGFPKHNTAGAKNGFYGKSHSRETRLKISIKSSRKRGPRGLEVKL
SIO_010081: T4p148
subclass of: SO_0000673
so part of: T4p148
location: 80196..80618
location: region:80196-80618:1
so has part: feature:80196-80618:1:exon

NP_049761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80196-80618:1:exon

T4p149
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 5.3
locus tag: T4p149
so part of: sequence
location: 80621..80791
location: region:80621-80791:1
so has part: feature:80621-80791:1:exon
subclass of: SO_0000010

1258701
type: Gene
SIO_000068: ncbigene

position:80621:1
position: 80621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80791:1
position: 80791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80621-80791:1:exon

T4p149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 5.3
locus tag: T4p149
note: protein seen in RB49 but not RB69
codon start: 1
transl table: 11
product: gp5.3 conserved hypothetical protein
translation: MCGANNPRYGKIAPNAKSVIINGVLYKSIKIAAKALNINYSTLKGRVKAGYYKCQD
SIO_010081: T4p149
subclass of: SO_0000673
so part of: T4p149
location: 80621..80791
location: region:80621-80791:1
so has part: feature:80621-80791:1:exon

NP_049762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80621-80791:1:exon

T4p150
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 5.4
locus tag: T4p150
so part of: sequence
location: 80779..81072
location: region:80779-81072:1
so has part: feature:80779-81072:1:exon
subclass of: SO_0000010

1258818
type: Gene
SIO_000068: ncbigene

position:80779:1
position: 80779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81072:1
position: 81072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80779-81072:1:exon

T4p150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 5.4
locus tag: T4p150
codon start: 1
transl table: 11
product: PAAR motif of membran proteins
translation: MSGLSYDKCVTAGHEAWPPTVVNATQSKVFTGGIAVLVAGDPITEHTEIKKPYETHGGVTQPRTSKVYVTGKKAVQMADPISCGDTVAQASSKVFIK
SIO_010081: T4p150
subclass of: SO_0000673
so part of: T4p150
location: 80779..81072
location: region:80779-81072:1
so has part: feature:80779-81072:1:exon

NP_049763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80779-81072:1:exon

T4p151
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 6
locus tag: T4p151
so part of: sequence
location: 81081..83063
location: region:81081-83063:1
so has part: feature:81081-83063:1:exon
subclass of: SO_0000010

1258662
type: Gene
SIO_000068: ncbigene

position:81081:1
position: 81081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83063:1
position: 83063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81081-83063:1:exon

T4p151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 6
locus tag: T4p151
note: baseplate wedge; gp6; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; wedge assembly is initiated by association of gp10 and gp11, followed by addition of gp7, gp8, gp6, gp53 and gp25
codon start: 1
transl table: 11
product: baseplate wedge subunit
translation: MANTPVNYQLTRTANAIPEIFVGGTFAEIKQNLIEWLNGQNEFLDYDFEGSRLNVLCDLLAYNTLYIQQFGNAAVYESFMRTANLRSSVVQAAQDNGYLPTSKSAAQTEIMLTCTDALNRNYITIPRGTRFLAYAKDTSVNPYNFVSREDVIAIRDKNNQYFPRLKLAQGRIVRTEIIYDKLTPIIIYDKNIDRNQVKLYVDGAEWINWTRKSMVHAGSTSTIYYMRETIDGNTEFYFGEGEISVNASEGALTANYIGGLKPTQNSTIVIEYISTNGADANGAVGFSYADTLTNITVININENPNDDPDFVGADGGGDPEDIERIRELGTIKRETQQRCVTATDYDTFVSERFGSIIQAVQTFTDSTKPGYAFIAAKPKSGLYLTTVQREDIKNYLKDYNLAPITPSIISPNYLFIKTNLKVTYALNKLQESEQWLEGQIIDKIDRYYTEDVEIFNSSFAKSKMLTYVDDADHSVIGSSATIQMVREVQNFYKTPEAGIKYNNQIKDRSMESNTFSFNSGRKVVNPDTGLEEDVLYDVRIVSTDRDSKGIGKVIIGPFASGDVTENENIQPYTGNDFNKLANSDGRDKYYVIGEINYPADVIYWNIAKINLTSEKFEVQTIELYSDPTDDVIFTRDGSLIVFENDLRPQYLTIDLEPISQ
SIO_010081: T4p151
subclass of: SO_0000673
so part of: T4p151
location: 81081..83063
location: region:81081-83063:1
so has part: feature:81081-83063:1:exon

NP_049764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81081-83063:1:exon

T4p152
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 7
locus tag: T4p152
so part of: sequence
location: 83060..86158
location: region:83060-86158:1
so has part: feature:83060-86158:1:exon
subclass of: SO_0000010

1258549
type: Gene
SIO_000068: ncbigene

position:83060:1
position: 83060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86158:1
position: 86158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83060-86158:1:exon

T4p152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 7
locus tag: T4p152
note: C-terminus is predicted integral membrane domain; gp7; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid contractile tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp7 is a component of the wedges and is localized to the outer corners of the baseplate; at 1,032 aa, gp7 is the second largest T4 protein
codon start: 1
transl table: 11
product: baseplate wedge subunit
translation: MTVKAPSVTSLRISKLSANQVQVRWDDVGANFYYFVEIAETKTNSGENLPSNQYRWINLGYTANNSFFFDDADPLTTYIIRVATAAQDFEQSDWIYTEEFETFATNAYTFQNMIEMQLANKFIQEKFTLNNSDYVNFNNDTIMAALMNESFQFSPSYVDVSSISNFIIGENEYHEIQGSIQQVCKDINRVYLMESEGILYLFERYQPVVKVSNDKGQTWKAVKLFNDRVGYPLSKTVYYQSANTTYVLGYDKIFYGRKSTDVRWSADDVRFSSQDITFAKLGDQLHLGFDVEIFATYATLPANVYRIAEAITCTDDYIYVVARDKVRYIKTSNALIDFDPLSPTYSERLFEPDTMTITGNPKAVCYKMDSICDKVFALIIGEVETLNANPRTSKIIDSADKGIYVLNHDEKTWKRVFGNTEEERRRIQPGYANMSTDGKLVSLSSSNFKFLSDNVVNDPETAAKYQLIGAVKYEFPREWLADKHYHMMAFIADETSDWETFTPQPMKYYAEPFFNWSKKSNTRCWINNSDRAVVVYADLKYTKVIENIPETSPDRLVHEYWDDGDCTIVMPNVKFTGFKKYASGMLFYKASGEIISYYDFNYRVRDTVEIIWKPTEVFLKAFLQNQEHETPWSPEEERGLADPDLRPLIGTMMPDSYLLQDSNFEAFCEAYIQYLSDGYGTQYNNLRNLIRNQYPREEHAWEYLWSEIYKRNIYLNADKRDAVARFFESRSYDFYSTKGIEASYKFLFKVLYNEEVEIEIESGAGTEYDIIVQSDSLTEDLVGQTIYTATGRCNVTYIERSYSNGKLQWTVTIHNLLGRLIAGQEVKAERLPSFEGEIIRGVKGKDLLQNNIDYINRSRSYYVMKIKSNLPSSRWKSDVIRFVHPVGFGFIAITLLTMFINVGLTLKHTETIINKYKNYKWDSGLPTEYADRIAKLTPTGEIEHDSVTGEAIYEPGPMAGVKYPLPDDYNAENNNSIFQGQLPSERRKLMSPLFDASGTTFAQFRDLVNKRLKDNIGNPRDPENPTQVKIDE
SIO_010081: T4p152
subclass of: SO_0000673
so part of: T4p152
location: 83060..86158
location: region:83060-86158:1
so has part: feature:83060-86158:1:exon

NP_049765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83060-86158:1:exon

T4p153
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 8
locus tag: T4p153
so part of: sequence
location: 86151..87155
location: region:86151-87155:1
so has part: feature:86151-87155:1:exon
subclass of: SO_0000010

1258542
type: Gene
SIO_000068: ncbigene

position:86151:1
position: 86151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87155:1
position: 87155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86151-87155:1:exon

T4p153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 8
locus tag: T4p153
note: gp8; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp8 is a component of the wedges
codon start: 1
transl table: 11
product: baseplate wedge subunit
translation: MNDSSVIYRAIVTSKFRTEKMLNFYNSIGSGPDKNTIFITFGRSEPWSSNENEVGFAPPYPTDSVLGVTDMWTHMMGTVKVLPSMLDAVIPRRDWGDTRYPDPYTFRINDIVVCNSAPYNATESGAGWLVYRCLDVPDTGMCSIASLTDKDECLKLGGKWTPSARSMTPPEGRGDAEGTIEPGDGYVWEYLFEIPPDVSINRCTNEYIVVPWPEELKEDPTRWGYEDNLTWQQDDFGLIYRVKANTIRFKAYLDSVYFPEAALPGNKGFRQISIITNPLEAKAHPNDPNVKAEKDYYDPEDLMRHSGEMIYMENRPPIIMAMDQTEEINILFTF
SIO_010081: T4p153
subclass of: SO_0000673
so part of: T4p153
location: 86151..87155
location: region:86151-87155:1
so has part: feature:86151-87155:1:exon

NP_049766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86151-87155:1:exon

T4p154
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 9
locus tag: T4p154
so part of: sequence
location: 87219..88085
location: region:87219-88085:1
so has part: feature:87219-88085:1:exon
subclass of: SO_0000010

1258617
type: Gene
SIO_000068: ncbigene

position:87219:1
position: 87219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88085:1
position: 88085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87219-88085:1:exon

T4p154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 9
locus tag: T4p154
note: tail fiber connector and trigger for tail sheath contraction; gp9; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp9 is a component of the wedges and forms the socket of a long tail fiber
codon start: 1
transl table: 11
product: baseplate wedge tail fiber protein connector
translation: MFIQEPKKLIDTGEIGNASTGDILFDGGNKINSDFNAIYNAFGDQRKMAVANGTGADGQIIHATGYYQKHSITEYATPVKVGTRHDIDTSTVGVKVIIERGELGDCVEFINSNGSISVTNPLTIQAIDSIKGVSGNLVVTSPYSKVTLRCISSDNSTSVWNYSIESMFGQKESPAEGTWNISTSGSVDIPLFHRTEYNMAKLLVTCQSVDGRKIKTAEINILVDTVNSEVISSEYAVMRVGNETEEDEIANIAFSIKENYVTATISSSTVGMRAAVKVIATQKIGVAQ
SIO_010081: T4p154
subclass of: SO_0000673
so part of: T4p154
location: 87219..88085
location: region:87219-88085:1
so has part: feature:87219-88085:1:exon

NP_049767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87219-88085:1:exon

T4p155
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 10
locus tag: T4p155
so part of: sequence
location: 88085..89893
location: region:88085-89893:1
so has part: feature:88085-89893:1:exon
subclass of: SO_0000010

1258808
type: Gene
SIO_000068: ncbigene

position:89893:1
position: 89893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88085-89893:1:exon

T4p155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 10
locus tag: T4p155
note: gp10; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp10 is a component of the wedges
codon start: 1
transl table: 11
product: baseplate wedge subunit
translation: MKQNINIGNVVDDGTGDYLRKGGIKINENFDELYYELGDGDVPYSAGAWKTYNASSGQTLTAEWGKSYAINTSSGRVTINLPKGTVNDYNKVIRARDVFATWNVNPVTLVAASGDTIKGSAVPVEINVRFSDLELVYCAPGRWEYVKNKQIDKITSSDISNVARKEFLVEVQGQTDFLDVFRGTSYNVNNIRVKHRGNELYYGDVFSENSDFGSPGENEGELVPLDGFNIRLRQPCNIGDTVQIETFMDGVSQWRSSYTRRQIRLLDSKLTSKTSLEGSIYVTDLSTMKSIPFSAFGLIPGEPINPNSLEVRFNGILQELAGTVGMPLFHCVGADSDDEVECSVLGGTWEQSHTDYSVETDENGIPEILHFDSVFEHGDIINITWFNNDLGTLLTKDEIIDETDNLYVSQGPGVDISGDVNLTDFDKIGWPNVEAVQSYQRAFNAVSNIFDTIYPIGTIYENAVNPNNPVTYMGFGSWKLFGQGKVLVGWNEDISDPNFALNNNDLDSGGNPSHTAGGTGGSTSVTLENANLPATETDEEVLIVDENGSVIVGGCQYDPDESGPIYTKYREAKASTNSTHTPPTSITNIQPYITVYRWIRIA
SIO_010081: T4p155
subclass of: SO_0000673
so part of: T4p155
location: 88085..89893
location: region:88085-89893:1
so has part: feature:88085-89893:1:exon

NP_049768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88085-89893:1:exon

T4p156
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 11
locus tag: T4p156
so part of: sequence
location: 89893..90552
location: region:89893-90552:1
so has part: feature:89893-90552:1:exon
subclass of: SO_0000010

1258638
type: Gene
SIO_000068: ncbigene

position:90552:1
position: 90552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89893-90552:1:exon

T4p156
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 11
locus tag: T4p156
note: interface protein between baseplate wedge and gp12 short tail fibers; can be added later; gp11; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp11 is a component of the wedges and binds the short tail fiber
codon start: 1
transl table: 11
product: baseplate wedge subunit
translation: MSLLNNKAGVISRLADFLGFRPKTGDIDVMNRQSVGSVTISQLAKGFYEPNIESAINDVHNFSIKDVGTIITNKTGVSPEGVSQTDYWAFSGTVTDDSLPPGSPITVLVFGLPVSATTGMTAIEFVAKVRVALQEAIASFTAINSYKDHPTDGSKLEVTYLDNQKHVLSTYSTYGITISQEIISESKPGYGTWNLLGAQTVTLDNQQTPTVFYHFERTA
SIO_010081: T4p156
subclass of: SO_0000673
so part of: T4p156
location: 89893..90552
location: region:89893-90552:1
so has part: feature:89893-90552:1:exon

NP_049769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89893-90552:1:exon

T4p157
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 12
locus tag: T4p157
so part of: sequence
location: 90549..92132
location: region:90549-92132:1
so has part: feature:90549-92132:1:exon
subclass of: SO_0000010

1258789
type: Gene
SIO_000068: ncbigene

position:90549:1
position: 90549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92132:1
position: 92132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90549-92132:1:exon

T4p157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 12
locus tag: T4p157
note: responsible for irreversible adsorption to host cells; can be added after phage completion
codon start: 1
transl table: 11
product: tail collar fiber protein
translation: MSNNTYQHVSNESRYVKFDPTDTNFPPEITDVHAAIAAISPAGVNGVPDASSTTKGILFIPTEQEVIDGTNNTKAVTPATLATRLSYPNATETVYGLTRYSTNDEAIAGVNNESSITPAKFTVALNNAFETRVSTESSNGVIKISSLPQALAGADDTTAMTPLKTQQLAIKLIAQIAPSETTATESDQGVVQLATVAQVRQGTLREGYAISPYTFMNSSSTEEYKGVIKLGTQSEVNSNNASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIQQRGGQIIYGTLRIEDTFTIANGGANITGTVRMTGGYIQGNRIVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGNPSNPGLPDMRGLFVRGSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQIQQMSYHKHAGGFGEHDDLGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPESQRNSKYTLNRPELIGNETRPWNISLNYIIKVKE
SIO_010081: T4p157
subclass of: SO_0000673
so part of: T4p157
location: 90549..92132
location: region:90549-92132:1
so has part: feature:90549-92132:1:exon

NP_049770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90549-92132:1:exon

T4p158
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: wac
locus tag: T4p158
so part of: sequence
location: 92129..93592
location: region:92129-93592:1
so has part: feature:92129-93592:1:exon
subclass of: SO_0000010

1258630
type: Gene
SIO_000068: ncbigene

position:92129:1
position: 92129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93592:1
position: 93592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92129-93592:1:exon

T4p158
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: wac
locus tag: T4p158
note: 'whisker' fibers at base of head; aid in long tail fiber attachment; whisker protein; gp wac; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; after DNA packaging, gp13, gp14, and six trimers of fibritin bind to the portal vertex of the head, forming the neck and whiskers; fibritin is also a chaperone and facilitates attachment of long tail fibers to the baseplate of the tail
codon start: 1
transl table: 11
product: fibritin neck whisker
translation: MTDIVLNDLPFVDGPPAEGQSRISWIKNGEEILGADTQYGSEGSMNRPTVSVLRNVEVLDKNIGILKTSLETANSDIKTIQGILDVSGDIEALAQIGINKKDISDLKTLTSEHTEILNGTNNTVDSILADIGPFNAEANSVYRTIRNDLLWIKRELGQYTGQDINGLPVVGNPSSGMKHRIINNTDVITSQGIRLSELETKFIESDVGSLTIEVGNLREELGPKPPSFSQNVYSRLNEIDTKQTTVESDISAIKTSIGYPGNNSIITSVNTNTDNIASINLELNQSGGIKQRLTVIETSIGSDDIPSSIKGQIKDNTTSIESLNGIVGENTSSGLRANVSWLNQIVGTDSSGGQPSPPGSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVFLSTFLSPA
SIO_010081: T4p158
subclass of: SO_0000673
so part of: T4p158
location: 92129..93592
location: region:92129-93592:1
so has part: feature:92129-93592:1:exon

NP_049771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92129-93592:1:exon

T4p159
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 13
locus tag: T4p159
so part of: sequence
location: 93624..94553
location: region:93624-94553:1
so has part: feature:93624-94553:1:exon
subclass of: SO_0000010

1258809
type: Gene
SIO_000068: ncbigene

position:93624:1
position: 93624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94553:1
position: 94553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93624-94553:1:exon

T4p159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 13
locus tag: T4p159
note: neck or collar protein; gp13; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; after DNA is packaged into the head, gp13, gp14, and six trimers of gp wac (whisker or fibritin) bind to the portal vertex to complete the head, which then binds to the tail
codon start: 1
transl table: 11
product: head-tail adaptor Ad2
translation: MSGYNPQNPKELKDVILRRLGAPIINVELTPDQIYDCIQRALELYGEYHFDGLNKGFHVFYVGDDEERYKTGVFDLRGSNVFAVTRILRTNIGSITSMDGNATYPWFTDFLLGMAGINGGMGTSCNRFYGPNAFGADLGYFTQLTSYMGMMQDMLSPIPDFWFNSANEQLKVMGNFQKYDLIIVESWTKSYIDTNKMVGNTVGYGTVGPQDSWSLSERYNNPDHNLVGRVVGQDPNVKQGAYNNRWVKDYATALAKELNGQILARHQGMMLPGGVTIDGQRLIEEARLEKEALREELYLLDPPFGILVG
SIO_010081: T4p159
subclass of: SO_0000673
so part of: T4p159
location: 93624..94553
location: region:93624-94553:1
so has part: feature:93624-94553:1:exon

NP_049772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93624-94553:1:exon

T4p160
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 14
locus tag: T4p160
so part of: sequence
location: 94555..95325
location: region:94555-95325:1
so has part: feature:94555-95325:1:exon
subclass of: SO_0000010

1258695
type: Gene
SIO_000068: ncbigene

position:94555:1
position: 94555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95325:1
position: 95325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94555-95325:1:exon

T4p160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 14
locus tag: T4p160
note: neck or collar protein; gp14; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; after DNA is packaged into the head, gp13, gp14, and six trimers of gp wac (whisker or fibritin) bind to the portal vertex to complete the head, which then binds to the tail
codon start: 1
transl table: 11
product: head closure Hc2
translation: MATYDKNLFAKLENRTGYSQTNETEILNPYVNFNHYKNSQILADVLVAESIQMRGVECYYVPREYVSPDLIFGEDLKNKFTKAWKFAAYLNSFEGYEGAKSFFSNFGMQVQDEVTLSINPNLFKHQVNGKEPKEGDLIYFPMDNSLFEINWVEPYDPFYQLGQNAIRKITAGKFIYSGEEINPVLQKNEGINIPEFSELELNAVRNLNGIHDINIDQYAEVDQINSEAKEYVEPYVVVNNRGKSFESSPFDNDFMD
SIO_010081: T4p160
subclass of: SO_0000673
so part of: T4p160
location: 94555..95325
location: region:94555-95325:1
so has part: feature:94555-95325:1:exon

NP_049773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94555-95325:1:exon

T4p161
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 15
locus tag: T4p161
so part of: sequence
location: 95367..96185
location: region:95367-96185:1
so has part: feature:95367-96185:1:exon
subclass of: SO_0000010

1258573
type: Gene
SIO_000068: ncbigene

position:95367:1
position: 95367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96185:1
position: 96185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95367-96185:1:exon

T4p161
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 15
locus tag: T4p161
note: connector protein to gp3 and/or gp19; gp15; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; gp15 forms the connector which enables the tail to bind to the head
codon start: 1
transl table: 11
product: tail sheath stabilizer
translation: MFGYFYNSSFRRYATLMGDLFSNIQIKRQLESGDKFIRVPITYASKEHFMMKLNKWTSINSQEDVAKVETILPRINLHLVDFSYNAPFKTNILNQNLLQKGATSVVSQYNPSPIKMIYELSIFTRYEDDMFQIVEQILPYFQPHFNTTMYEQFGNDIPFKRDIKIVLMSAAIDEAIDGDNLSRRRIEWSLTFEVNGWMYPPVDDAEGLIRTTYTDFHANTRDLPDGEGVFESVDSEVVPRDIDPEDWDGTVKQTFTSNVNRPTPPEPPGPRT
SIO_010081: T4p161
subclass of: SO_0000673
so part of: T4p161
location: 95367..96185
location: region:95367-96185:1
so has part: feature:95367-96185:1:exon

NP_049774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95367-96185:1:exon

T4p162
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 16
locus tag: T4p162
so part of: sequence
location: 96194..96688
location: region:96194-96688:1
so has part: feature:96194-96688:1:exon
subclass of: SO_0000010

1258811
type: Gene
SIO_000068: ncbigene

position:96194:1
position: 96194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96688:1
position: 96688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96194-96688:1:exon

T4p162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 16
locus tag: T4p162
note: gp16; DNA recognition component of the packaging motor; interacts with gp17; stimulates the gp17-associated ATPase and packaging activities
codon start: 1
transl table: 11
product: terminase small subunit
translation: MEGLDINKLLDISDLPGIDGEEIKVYEPLQLVEVKSNPQNRTPDLEDDYGVVRRNMHFQQQMLMDAAKIFLETAKNADSPRHMEVFATLMGQMTTTNREILKLHKDMKDITSEQVGTKGAVPTGQMNIQNATVFMGSPTELMDEIGDAYEAQEAREKVINGTTD
SIO_010081: T4p162
subclass of: SO_0000673
so part of: T4p162
location: 96194..96688
location: region:96194-96688:1
so has part: feature:96194-96688:1:exon

NP_049775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96194-96688:1:exon

T4p163
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: q
gene: 17
locus tag: T4p163
gene synonym: q
so part of: sequence
location: 96672..98504
location: region:96672-98504:1
so has part: feature:96672-98504:1:exon
subclass of: SO_0000010

1258647
type: Gene
SIO_000068: ncbigene

position:96672:1
position: 96672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98504:1
position: 98504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96672-98504:1:exon

T4p163
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: q
gene: 17
locus tag: T4p163
gene synonym: q
note: DNA packaging enzyme, nuclease and ATPase activity; binds ssDNA, gp16 and gp20; gp17; terminase subunit with nuclease and ATPase activity; binds ssDNA; generates free phage genome ends from DNA concatamers, links them to proheads, and translocates DNA; in Bacteriphage T4, gp17 forms complex with gp16
codon start: 1
transl table: 11
product: terminase large subunit
translation: MEQPINVLNDFHPLNEAGKILIKHPSLAERKDEDGIHWIKSQWDGKWYPEKFSDYLRLHKIVKIPNNSDKPELFQTYKDKNNKRSRYMGLPNLKRANIKTQWTREMVEEWKKCRDDIVYFAETYCAITHIDYGVIKVQLRDYQRDMLKIMSSKRMTVCNLSRQLGKTTVVAIFLAHFVCFNKDKAVGILAHKGSMSAEVLDRTKQAIELLPDFLQPGIVEWNKGSIELDNGSSIGAYASSPDAVRGNSFAMIYIDECAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNGLNHFYDIWTAAVEGKSGFEPYTAIWNSVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFEGTSGTLISGMKLAVMDFIEVTPDDHGFHQFKKPEPDRKYIATLDCSEGRGQDYHALHIIDVTDDVWEQVGVLHSNTISHLILPDIVMRYLVEYNECPVYIELNSTGVSVAKSLYMDLEYEGVICDSYTDLGMKQTKRTKAVGCSTLKDLIEKDKLIIHHRATIQEFRTFSEKGVSWAAEEGYHDDLVMSLVIFGWLSTQSKFIDYADKDDMRLASEVFSKELQDMSDDYAPVIFVDSVHSAEYVPVSHGMSMV
SIO_010081: T4p163
subclass of: SO_0000673
so part of: T4p163
location: 96672..98504
location: region:96672-98504:1
so has part: feature:96672-98504:1:exon

NP_049776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96672-98504:1:exon

T4p164
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 17
locus tag: T4p164
so part of: sequence
location: 96933..98504
location: region:96933-98504:1
so has part: feature:96933-98504:1:exon
subclass of: SO_0000010

1258675
type: Gene
SIO_000068: ncbigene

position:96933:1
position: 96933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96933-98504:1:exon

T4p164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 17
locus tag: T4p164
note: internal transcription and in-frame translation of gene 17, has nuclease and ATPase activity but does not bind ssDNA; gp17; terminase subunit with nuclease and ATPase activity; binds ssDNA; generates free phage genome ends from DNA concatamers, links them to proheads, and translocates DNA; in Bacteriphage T4, gp17 forms complex with gp16
codon start: 1
transl table: 11
product: terminase large subunit
translation: MGLPNLKRANIKTQWTREMVEEWKKCRDDIVYFAETYCAITHIDYGVIKVQLRDYQRDMLKIMSSKRMTVCNLSRQLGKTTVVAIFLAHFVCFNKDKAVGILAHKGSMSAEVLDRTKQAIELLPDFLQPGIVEWNKGSIELDNGSSIGAYASSPDAVRGNSFAMIYIDECAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNGLNHFYDIWTAAVEGKSGFEPYTAIWNSVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFEGTSGTLISGMKLAVMDFIEVTPDDHGFHQFKKPEPDRKYIATLDCSEGRGQDYHALHIIDVTDDVWEQVGVLHSNTISHLILPDIVMRYLVEYNECPVYIELNSTGVSVAKSLYMDLEYEGVICDSYTDLGMKQTKRTKAVGCSTLKDLIEKDKLIIHHRATIQEFRTFSEKGVSWAAEEGYHDDLVMSLVIFGWLSTQSKFIDYADKDDMRLASEVFSKELQDMSDDYAPVIFVDSVHSAEYVPVSHGMSMV
SIO_010081: T4p164
subclass of: SO_0000673
so part of: T4p164
location: 96933..98504
location: region:96933-98504:1
so has part: feature:96933-98504:1:exon

NP_049777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96933-98504:1:exon

T4p165
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 17
locus tag: T4p165
so part of: sequence
location: 96987..98504
location: region:96987-98504:1
so has part: feature:96987-98504:1:exon
subclass of: SO_0000010

1258545
type: Gene
SIO_000068: ncbigene

position:96987:1
position: 96987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96987-98504:1:exon

T4p165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 17
locus tag: T4p165
note: internal transcription and in-frame translation of gene 17, has nuclease and ATPase activity but does not bind ssDNA; gp17; terminase subunit with nuclease and ATPase activity; binds ssDNA; generates free phage genome ends from DNA concatamers, links them to proheads, and translocates DNA; forms complex with gp16
codon start: 1
transl table: 11
product: terminase large subunit
translation: MVEEWKKCRDDIVYFAETYCAITHIDYGVIKVQLRDYQRDMLKIMSSKRMTVCNLSRQLGKTTVVAIFLAHFVCFNKDKAVGILAHKGSMSAEVLDRTKQAIELLPDFLQPGIVEWNKGSIELDNGSSIGAYASSPDAVRGNSFAMIYIDECAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNGLNHFYDIWTAAVEGKSGFEPYTAIWNSVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFEGTSGTLISGMKLAVMDFIEVTPDDHGFHQFKKPEPDRKYIATLDCSEGRGQDYHALHIIDVTDDVWEQVGVLHSNTISHLILPDIVMRYLVEYNECPVYIELNSTGVSVAKSLYMDLEYEGVICDSYTDLGMKQTKRTKAVGCSTLKDLIEKDKLIIHHRATIQEFRTFSEKGVSWAAEEGYHDDLVMSLVIFGWLSTQSKFIDYADKDDMRLASEVFSKELQDMSDDYAPVIFVDSVHSAEYVPVSHGMSMV
SIO_010081: T4p165
subclass of: SO_0000673
so part of: T4p165
location: 96987..98504
location: region:96987-98504:1
so has part: feature:96987-98504:1:exon

NP_049778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96987-98504:1:exon

T4p166
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 17
locus tag: T4p166
so part of: sequence
location: 97254..98504
location: region:97254-98504:1
so has part: feature:97254-98504:1:exon
subclass of: SO_0000010

1258656
type: Gene
SIO_000068: ncbigene

position:97254:1
position: 97254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97254-98504:1:exon

T4p166
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 17
locus tag: T4p166
note: internal transcription and in-frame translation of gene 17; gp17; terminase subunit with nuclease and ATPase activity; binds ssDNA; generates free phage genome ends from DNA concatamers, links them to proheads, and translocates DNA; forms complex with gp16
codon start: 1
transl table: 11
product: large terminase protein
translation: MSAEVLDRTKQAIELLPDFLQPGIVEWNKGSIELDNGSSIGAYASSPDAVRGNSFAMIYIDECAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNGLNHFYDIWTAAVEGKSGFEPYTAIWNSVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFEGTSGTLISGMKLAVMDFIEVTPDDHGFHQFKKPEPDRKYIATLDCSEGRGQDYHALHIIDVTDDVWEQVGVLHSNTISHLILPDIVMRYLVEYNECPVYIELNSTGVSVAKSLYMDLEYEGVICDSYTDLGMKQTKRTKAVGCSTLKDLIEKDKLIIHHRATIQEFRTFSEKGVSWAAEEGYHDDLVMSLVIFGWLSTQSKFIDYADKDDMRLASEVFSKELQDMSDDYAPVIFVDSVHSAEYVPVSHGMSMV
SIO_010081: T4p166
subclass of: SO_0000673
so part of: T4p166
location: 97254..98504
location: region:97254-98504:1
so has part: feature:97254-98504:1:exon

NP_049779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97254-98504:1:exon

T4p167
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 18
locus tag: T4p167
so part of: sequence
location: 98536..100515
location: region:98536-100515:1
so has part: feature:98536-100515:1:exon
subclass of: SO_0000010

1258597
type: Gene
SIO_000068: ncbigene

position:98536:1
position: 98536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100515:1
position: 100515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98536-100515:1:exon

T4p167
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 18
locus tag: T4p167
note: outer contractile sheath protein of phage tail; gp18; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the tube allows passage of DNA; gp18 forms the contractile outer sheath; 144 gp18 protomers are arranged in 24 stacked hexameric rings; each ring is offset to produce an apparent right handed helix
codon start: 1
transl table: 11
product: tail sheath
translation: MTLLSPGIELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAETADYFMSAMNFLQYGNDLRVVRAVDRDTAKNSSPIAGNIDYTISTPGSNYAVGDKITVKYVSDDIETEGKITEVDADGKIKKINIPTGKNYAKAKEVGEYPTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVALYPGELGDKIEIEIVSKADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRRNDAIVQSVVLSTKRGEKDIYDSNIYIDDFFAKGGSEYIFATAQNWPEGFSGILTLSGGLSSNAEVTAGDLMEAWDFFADRESVDVQLFIAGSCAGESLETASTVQKHVVSIGDARQDCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNHKYQYDKYNDVNRWVPLAADIAGLCARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGNKALGGIYEYRVVCDTTNNTPSVIDRNEFVATFYIQPARSINYITLNFVATATGADFDELTGLAG
SIO_010081: T4p167
subclass of: SO_0000673
so part of: T4p167
location: 98536..100515
location: region:98536-100515:1
so has part: feature:98536-100515:1:exon

NP_049780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98536-100515:1:exon

T4p168
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 19
locus tag: T4p168
so part of: sequence
location: 100632..101123
location: region:100632-101123:1
so has part: feature:100632-101123:1:exon
subclass of: SO_0000010

1258727
type: Gene
SIO_000068: ncbigene

position:100632:1
position: 100632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101123:1
position: 101123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100632-101123:1:exon

T4p168
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 19
locus tag: T4p168
note: inner tube protein of phage tail; gp19; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the tube allows passage of DNA; gp19 forms the inner tube; 144 gp19 protomers are arranged in 24 stacked hexameric rings; each ring is offset to produce an apparent right handed helix
codon start: 1
transl table: 11
product: tail protein
translation: MFVDDVTRAFESGDFARPNLFQVEISYLGQNFTFQCKATALPAGIVEKIPVGFMNRKINVAGDRTFDDWTVTVMNDEAHDARQKFVDWQSIAAGQGNEITGGKPAEYKKSAIVRQYARDAKTVTKEIEIKGLWPTNVGELQLDWDSNNEIQTFEVTLALDYWE
SIO_010081: T4p168
subclass of: SO_0000673
so part of: T4p168
location: 100632..101123
location: region:100632-101123:1
so has part: feature:100632-101123:1:exon

NP_049781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100632-101123:1:exon

T4p169
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 20
locus tag: T4p169
so part of: sequence
location: 101207..102781
location: region:101207-102781:1
so has part: feature:101207-102781:1:exon
subclass of: SO_0000010

1258582
type: Gene
SIO_000068: ncbigene

position:101207:1
position: 101207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102781:1
position: 102781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101207-102781:1:exon

T4p169
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 20
locus tag: T4p169
note: head initiation complex; connects head to neck; gp20; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; gp20 initiates capsid head assembly; involved in DNA packaging; binds with tail connector protein
codon start: 1
transl table: 11
product: portal protein
translation: MKFNVLSLFAPWAKMDERNFKDQEKEDLVSITAPKLDDGAREFEVSSNEAASPYNAAFQTIFGSYEPGMKTTRELIDTYRNLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFSDVLNHLSFQRKGSDHFRRWYVDSRIFFHKIIDPKRPKEGIKELRRLDPRQVQYVREIITETEAGTKIVKGYKEYFIYDTAHESYACDGRMYEAGTKIKIPKAAVVYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVYDASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPGADNTGNMEDIRWFRQALYMALRVPLSRIPQDQQGGVMFDSGTSITRDELTFAKFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFAELKEAEILERRINMLTMAEPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEESKEARFQDPDQEQEDF
SIO_010081: T4p169
subclass of: SO_0000673
so part of: T4p169
location: 101207..102781
location: region:101207-102781:1
so has part: feature:101207-102781:1:exon

NP_049782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101207-102781:1:exon

T4p170
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: pip
gene: 67
locus tag: T4p170
gene synonym: pip
so part of: sequence
location: 102781..103023
location: region:102781-103023:1
so has part: feature:102781-103023:1:exon
subclass of: SO_0000010

1258665
type: Gene
SIO_000068: ncbigene

position:103023:1
position: 103023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102781-103023:1:exon

T4p170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: pip
gene: 67
locus tag: T4p170
gene synonym: pip
note: gp67; pip; virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the virion head goes through several maturation steps including the construction of the prohead, enzymatic processing of the prohead, and DNA packaging; gp67 is a scaffolding protein around which shell proteins are assembled during the construction of the prohead
codon start: 1
transl table: 11
product: prohead
translation: MEGLIEAIKSNDLVAARKLFAEAMAARTIDLIKEEKIAIARNFLIEGEEPEDEDEDEDDEDSDDKDDKKDEDSDEDEDDE
SIO_010081: T4p170
subclass of: SO_0000673
so part of: T4p170
location: 102781..103023
location: region:102781-103023:1
so has part: feature:102781-103023:1:exon

NP_049783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102781-103023:1:exon

T4p171
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 68
locus tag: T4p171
so part of: sequence
location: 103023..103448
location: region:103023-103448:1
so has part: feature:103023-103448:1:exon
subclass of: SO_0000010

1258769
type: Gene
SIO_000068: ncbigene

position:103448:1
position: 103448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103023-103448:1:exon

T4p171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 68
locus tag: T4p171
note: gp68; virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the virion head goes through several maturation steps including the construction of the prohead, enzymatic processing of the prohead, and DNA packaging; gp68 is a scaffolding protein around which shell proteins are assembled during the construction of the prohead
codon start: 1
transl table: 11
product: head scaffolding protein
translation: MLLIPETHELVLENVEALIPEAQGRFDELSSALNKDDINTIVENMLDDETDLAVALASINENMPLNEFIVKHVSARGEITRTKDRKTRERNAFQTTGLSKAKRRQIARKATKTKIANPAGQSRAQRKRKKALKRRKALGLS
SIO_010081: T4p171
subclass of: SO_0000673
so part of: T4p171
location: 103023..103448
location: region:103023-103448:1
so has part: feature:103023-103448:1:exon

NP_049784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103023-103448:1:exon

T4p172
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 21
locus tag: T4p172
so part of: sequence
location: 103448..104086
location: region:103448-104086:1
so has part: feature:103448-104086:1:exon
subclass of: SO_0000010

1258771
type: Gene
SIO_000068: ncbigene

position:104086:1
position: 104086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103448-104086:1:exon

T4p172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 21
locus tag: T4p172
note: gp21; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; capsid head is assembled on an initiator complex of gp20; the gp22-gp21 scaffold and the gp23 capsid protein are assembled onto the initiator; after the scaffold is completely surrounded by gp23 and gp24, the T4 prohead protease, gp21, degrades the scaffold and cleaves most of the other head proteins, including gp23 and gp24, creating space in the cavity of the prohead
codon start: 1
transl table: 11
product: head maturation protease
translation: MNEPQLLIETWGQPGEIIDGVPMLESHDGKDLGLKPGLYIEGIFMQAEVVNRNKRLYPKRILEKAVKDYINEQVLTKQALGELNHPPRANVDPMQAAIIIEDMWWKGNDVYGRARVIEGDHGPGDKLAANIRAGWIPGVSSRGLGSLTDTNEGYRIVNEGFKLTVGVDAVWGPSAPDAWVTPKEITESQTAEADTSADDAYMALAEAMKKAL
SIO_010081: T4p172
subclass of: SO_0000673
so part of: T4p172
location: 103448..104086
location: region:103448-104086:1
so has part: feature:103448-104086:1:exon

NP_049785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103448-104086:1:exon

T4p173
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 21
locus tag: T4p173
so part of: sequence
location: 103514..104086
location: region:103514-104086:1
so has part: feature:103514-104086:1:exon
subclass of: SO_0000010

1258621
type: Gene
SIO_000068: ncbigene

position:103514:1
position: 103514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103514-104086:1:exon

T4p173
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 21
locus tag: T4p173
note: internal translation initiation of gene 21 yields smaller protein; gp21; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; capsid head is assembled on an initiator complex of gp20; the gp22-gp21 scaffold and the gp23 capsid protein are assembled onto the initiator; after the scaffold is completely surrounded by gp23 and gp24, the T4 prohead protease, gp21, degrades the scaffold and cleaves most of the other head proteins, including gp23 and gp24, creating space in the cavity of the prohead
codon start: 1
transl table: 11
product: head maturation protease
translation: MLESHDGKDLGLKPGLYIEGIFMQAEVVNRNKRLYPKRILEKAVKDYINEQVLTKQALGELNHPPRANVDPMQAAIIIEDMWWKGNDVYGRARVIEGDHGPGDKLAANIRAGWIPGVSSRGLGSLTDTNEGYRIVNEGFKLTVGVDAVWGPSAPDAWVTPKEITESQTAEADTSADDAYMALAEAMKKAL
SIO_010081: T4p173
subclass of: SO_0000673
so part of: T4p173
location: 103514..104086
location: region:103514-104086:1
so has part: feature:103514-104086:1:exon

NP_813810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103514-104086:1:exon

T4p174
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 22
locus tag: T4p174
so part of: sequence
location: 104117..104926
location: region:104117-104926:1
so has part: feature:104117-104926:1:exon
subclass of: SO_0000010

1258775
type: Gene
SIO_000068: ncbigene

position:104117:1
position: 104117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104926:1
position: 104926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104117-104926:1:exon

T4p174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 22
locus tag: T4p174
note: head scaffolding protein, degraded by gp21 protease; gp22; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; capsid head is assembled on an initiator complex of gp20; the gp22-gp21 scaffold and the gp23 capsid protein are assembled onto the initiator; after the scaffold is completely surrounded by gp23 and gp24, the T4 prohead protease, gp21, degrades the scaffold
codon start: 1
transl table: 11
product: head scaffolding protein
translation: MLKEQLIAEAQKIDASVALDSIFESVNISPEAKETFGTVFEATVKQHAVKLAESHIAKIAEKAEEEVEKNKEEAEEKAEKKIAEQASKFIDHLAKEWLAENKLAVDKGIKAELFESMLGGLKELFVEHNVVVPEESVDVVAEMEEELQEHKEESPRLFEELNMRDAYINYVQREVALSESTKDLTESQKEKVSALVEGMDYSDAFSSKLSAIVEMVKKSNKDESTITESINTPDTEAAGLNFVTEAVEDKAAQGAEDIVSVYAKVASRF
SIO_010081: T4p174
subclass of: SO_0000673
so part of: T4p174
location: 104117..104926
location: region:104117-104926:1
so has part: feature:104117-104926:1:exon

NP_049786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104117-104926:1:exon

T4p175
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 23
locus tag: T4p175
so part of: sequence
location: 104945..106510
location: region:104945-106510:1
so has part: feature:104945-106510:1:exon
subclass of: SO_0000010

1258751
type: Gene
SIO_000068: ncbigene

position:104945:1
position: 104945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106510:1
position: 106510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104945-106510:1:exon

T4p175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 23
locus tag: T4p175
note: major head protein is cleaved by gp21 protease; gp23; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; capsid head is composed of gp24 pentamers, surrounded by hexamers of the major capsid protein, gp23; capsid head is assembled on an initiator complex of gp20; the gp22-gp21 scaffold and the gp23 capsid protein are assembled onto the initiator; after the scaffold is completely surrounded by gp23 and gp24, the T4 prohead protease, gp21, degrades the scaffold and cleaves most of the other head proteins, including gp23 and gp24, creating space in the cavity of the prohead
codon start: 1
transl table: 11
product: major head protein
translation: MTIKTKAELLNKWKPLLEGEGLPEIANSKQAIIAKIFENQEKDFQTAPEYKDEKIAQAFGSFLTEAEIGGDHGYNATNIAAGQTSGAVTQIGPAVMGMVRRAIPNLIAFDICGVQPMNSPTGQVFALRAVYGKDPVAAGAKEAFHPMYGPDAMFSGQGAAKKFPALAASTQTTVGDIYTHFFQETGTVYLQASVQVTIDAGATDAAKLDAEIKKQMEAGALVEIAEGMATSIAELQEGFNGSTDNPWNEMGFRIDKQVIEAKSRQLKAAYSIELAQDLRAVHGMDADAELSGILATEIMLEINREVVDWINYSAQVGKSGMTLTPGSKAGVFDFQDPIDIRGARWAGESFKALLFQIDKEAVEIARQTGRGEGNFIIASRNVVNVLASVDTGISYAAQGLATGFSTDTTKSVFAGVLGGKYRVYIDQYAKQDYFTVGYKGPNEMDAGIYYAPYVALTPLRGSDPKNFQPVMGFKTRYGIGINPFAESAAQAPASRIQSGMPSILNSLGKNAYFRRVYVKGI
SIO_010081: T4p175
subclass of: SO_0000673
so part of: T4p175
location: 104945..106510
location: region:104945-106510:1
so has part: feature:104945-106510:1:exon

NP_049787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104945-106510:1:exon

T4p176
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 23.1
gene: segD
locus tag: T4p176
gene synonym: 23.1
so part of: sequence
location: complement(106561..107232)
location: region:106561-107232:-1
so has part: feature:106561-107232:-1:exon
subclass of: SO_0000010

1258554
type: Gene
SIO_000068: ncbigene

position:106561:-1
position: 106561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107232:-1
position: 107232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106561-107232:-1:exon

T4p176
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 23.1
gene: segD
locus tag: T4p176
gene synonym: 23.1
note: site-specific DNA endonuclease; GIY-YIG family
codon start: 1
transl table: 11
product: homing endonuclease
translation: MFKMKYLIYQITNIINGKIYIGAHATLDENDGYMGSGVNIKKSIKKYGIHNFKKEILYSFSSSEEMYKMEALLVNEEFVMRTDTYNAAIGGRGNPVIVHLQDPSYRNMLSIRTKEGMTVEAKRKISKAKTGVKQSDETIAKRVKGRNEYYKTHVHPRKNKPISISHRKAISEKLGGIKKFIPICIKGVKFDNPDYAAEHFKVSPKTIRNWINADDMPDCYRIK
SIO_010081: T4p176
subclass of: SO_0000673
so part of: T4p176
location: complement(106561..107232)
location: region:106561-107232:-1
so has part: feature:106561-107232:-1:exon

NP_049788.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106561-107232:-1:exon

T4p177
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: os
gene: 24
locus tag: T4p177
gene synonym: os
so part of: sequence
location: 107323..108606
location: region:107323-108606:1
so has part: feature:107323-108606:1:exon
subclass of: SO_0000010

1258587
type: Gene
SIO_000068: ncbigene

position:107323:1
position: 107323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108606:1
position: 108606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107323-108606:1:exon

T4p177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: os
gene: 24
locus tag: T4p177
gene synonym: os
note: pentameric vertex protein, cleaved by gp21; gp24; os; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; capsid head is composed of gp24 pentamers, surrounded by hexamers of the major capsid protein, gp23; capsid head is assembled on an initiator complex of gp20; the gp22-gp21 scaffold and the gp23 capsid protein are assembled onto the initiator; after the scaffold is completely surrounded by gp23 and gp24, the T4 prohead protease, gp21, degrades the scaffold and cleaves most of the other head proteins, including gp23 and gp24, creating space in the cavity of the prohead
codon start: 1
transl table: 11
product: capsid vertex protein
translation: MAKINELLRESTTTNSNSIGRPNLVALTRATTKLIYSDIVATQRTNQPVAAFYGIKYLNPDNEFTFKTGATYAGEAGYVDREQITELTEESKLTLNKGDLFKYNNIVYKVLEDTPFATIEESDLELALQIAIVLLKVRLFSDAASTSKFESSDSEIADARFQINKWQTAVKSRKLKTGITVELAQDLEANGFDAPNFLEDLLATEMADEINKDILQSLITVSKRYKVTGITDSGFIDLSYASAPEAGRSLYRMVCEMVSHIQKESTYTATFCVASARAAAILAASGWLKHKPEDDKYLSQNAYGFLANGLPLYCDTNSPLDYVIVGVVENIGEKEIVGSIFYAPYTEGLDLDDPEHVGAFKVVVDPESLQPSIGLLVRYALSANPYTVAKDEKEARIIDGGDMDKMAGRSDLSVLLGVKLPKIIIDE
SIO_010081: T4p177
subclass of: SO_0000673
so part of: T4p177
location: 107323..108606
location: region:107323-108606:1
so has part: feature:107323-108606:1:exon

NP_049789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107323-108606:1:exon

T4p178
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 24.1
gene: rnlB
locus tag: T4p178
gene synonym: 24.1
so part of: sequence
location: complement(108636..109640)
location: region:108636-109640:-1
so has part: feature:108636-109640:-1:exon
subclass of: SO_0000010

1258563
type: Gene
SIO_000068: ncbigene

position:108636:-1
position: 108636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109640:-1
position: 109640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108636-109640:-1:exon

T4p178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 24.1
gene: rnlB
locus tag: T4p178
gene synonym: 24.1
note: second RNA ligase of T4, related to RNA editing enzymes
codon start: 1
transl table: 11
product: RNA ligase
translation: MFKKYSSLENHYNSKFIEKLYSLGLTGGEWVAREKIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFAGPGIQKNVDYCDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFKFKMAPLLGRGKFEELIKLPNDLDSVVQDYNFTVDHAGLVDANKCVWNAEAKGEVFTAEGYVLKPCYPSWLRNGNRVAIKCKNSKFSEKKKSDKPIKAKVELSEADNKLVGILACYVTLNRVNNVISKIGEIGPKDFGKVMGLTVQDILEETSREGITLTQADNPSLIKKELVKMVQDVLRPAWIELVS
SIO_010081: T4p178
subclass of: SO_0000673
so part of: T4p178
location: complement(108636..109640)
location: region:108636-109640:-1
so has part: feature:108636-109640:-1:exon

NP_049790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108636-109640:-1:exon

T4p179
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 24.2
locus tag: T4p179
so part of: sequence
location: complement(109650..109928)
location: region:109650-109928:-1
so has part: feature:109650-109928:-1:exon
subclass of: SO_0000010

1258738
type: Gene
SIO_000068: ncbigene

position:109650:-1
position: 109650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109928:-1
position: 109928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109650-109928:-1:exon

T4p179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 24.2
locus tag: T4p179
codon start: 1
transl table: 11
product: gp24.2 conserved hypothetical protein
translation: MEQYDLYENESFANQLREKALKSKQFKLECFIKDFSELANKAAEQGKTHFNYYCIARDKLITEEIGDWLRKEGFSFKVNSDQRDGDWLEITF
SIO_010081: T4p179
subclass of: SO_0000673
so part of: T4p179
location: complement(109650..109928)
location: region:109650-109928:-1
so has part: feature:109650-109928:-1:exon

NP_049791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109650-109928:-1:exon

T4p180
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 24.3
locus tag: T4p180
so part of: sequence
location: complement(109915..110085)
location: region:109915-110085:-1
so has part: feature:109915-110085:-1:exon
subclass of: SO_0000010

1258562
type: Gene
SIO_000068: ncbigene

position:109915:-1
position: 109915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110085:-1
position: 110085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109915-110085:-1:exon

T4p180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 24.3
locus tag: T4p180
codon start: 1
transl table: 11
product: gp24.3 conserved hypothetical protein
translation: MRTEVVVFTLHESGKSFIEIARELNLQAKEVAVLWAREKVVYRKRHINKKVKNGTV
SIO_010081: T4p180
subclass of: SO_0000673
so part of: T4p180
location: complement(109915..110085)
location: region:109915-110085:-1
so has part: feature:109915-110085:-1:exon

NP_049792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109915-110085:-1:exon

T4p181
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: eph
gene: hoc
locus tag: T4p181
gene synonym: eph
so part of: sequence
location: complement(110187..111317)
location: region:110187-111317:-1
so has part: feature:110187-111317:-1:exon
subclass of: SO_0000010

1258642
type: Gene
SIO_000068: ncbigene

position:110187:-1
position: 110187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111317:-1
position: 111317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110187-111317:-1:exon

T4p181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: eph
gene: hoc
locus tag: T4p181
gene synonym: eph
note: highly immunogenic supplemental capsid protein at the center of each capsomere
codon start: 1
transl table: 11
product: Hoc-like head decoration
translation: MTFTVDITPKTPTGVIDETKQFTATPSGQTGGGTITYAWSVDNVPQDGAEATFSYVLKGPAGQKTIKVVATNTLSEGGPETAEATTTITVKNKTQTTTLAVTPASPAAGVIGTPVQFTAALASQPDGASATYQWYVDDSQVGGETNSTFSYTPTTSGVKRIKCVAQVTATDYDALSVTSNEVSLTVNKKTMNPQVTLTPPSINVQQDASATFTANVTGAPEEAQITYSWKKDSSPVEGSTNVYTVDTSSVGSQTIEVTATVTAADYNPVTVTKTGNVTVTAKVAPEPEGELPYVHPLPHRSSAYIWCGWWVMDEIQKMTEEGKDWKTDDPDSKYYLHRYTLQKMMKDYPEVDVQESRNGYIIHKTALETGIIYTYP
SIO_010081: T4p181
subclass of: SO_0000673
so part of: T4p181
location: complement(110187..111317)
location: region:110187-111317:-1
so has part: feature:110187-111317:-1:exon

NP_049793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110187-111317:-1:exon

T4p182
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: hoc.1
alternative label: lip
gene: inh
locus tag: T4p182
gene synonym: hoc.1; lip
so part of: sequence
location: complement(111327..112007)
location: region:111327-112007:-1
so has part: feature:111327-112007:-1:exon
subclass of: SO_0000010

1258560
type: Gene
SIO_000068: ncbigene

position:111327:-1
position: 111327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112007:-1
position: 112007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111327-112007:-1:exon

T4p182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: hoc.1
alternative label: lip
gene: inh
locus tag: T4p182
gene synonym: hoc.1; lip
codon start: 1
transl table: 11
product: minor head protein inhibitor of protease
translation: MIDKDYIAELKALDDNKEAKAKLAEYAEQFGIKVKKNKSFDNIVVDIEEALQKLASEPMPETDGLSIKDLIDAADAAEGLKYDDEEVNPEAALLIDSPIKSDIKIEVVETDKIPENTDVLIEDTPFVEEKFEQAVAEIIESEKPSVFTLPENFSPNLQLIGKNLGFCTVPWWIYQWIAETPDWKSHPTSFEHASAHQTLFSLIYYINRDGSVLIRETRNSSFVTLK
SIO_010081: T4p182
subclass of: SO_0000673
so part of: T4p182
location: complement(111327..112007)
location: region:111327-112007:-1
so has part: feature:111327-112007:-1:exon

NP_049794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111327-112007:-1:exon

T4p183
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: hoc.2
gene: segE
locus tag: T4p183
gene synonym: hoc.2
so part of: sequence
location: 112057..112674
location: region:112057-112674:1
so has part: feature:112057-112674:1:exon
subclass of: SO_0000010

1258802
type: Gene
SIO_000068: ncbigene

position:112057:1
position: 112057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112674:1
position: 112674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112057-112674:1:exon

T4p183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: hoc.2
gene: segE
locus tag: T4p183
gene synonym: hoc.2
note: site-specific DNA endonuclease; GIY-YIG family
codon start: 1
transl table: 11
product: homing endonuclease
translation: MYHFVYETTNLINGKKYIGKHSTDDLNDGYLGSGKAIQQAIKKYGENNFSRTILKEFKTSEEAYMYEEEIITPELIKSKNYYNMKPGGIGGIVMTTDVIAKMKESSAKRFENSPGTVLGKTCYTNGTKNIFIKPGELVPEGFVKGMVHPNRKSRKGCKVKPTTTGTFWVNNGAINKLIQPDGIIPDGFIKGRLMKRDSKGKFSKA
SIO_010081: T4p183
subclass of: SO_0000673
so part of: T4p183
location: 112057..112674
location: region:112057-112674:1
so has part: feature:112057-112674:1:exon

NP_049795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112057-112674:1:exon

T4p184
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: dar
gene: uvsW
locus tag: T4p184
gene synonym: dar
so part of: sequence
location: 112677..114440
location: region:112677-114440:1
so has part: feature:112677-114440:1:exon
subclass of: SO_0000010

1258733
type: Gene
SIO_000068: ncbigene

position:112677:1
position: 112677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114440:1
position: 114440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112677-114440:1:exon

T4p184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: dar
gene: uvsW
locus tag: T4p184
gene synonym: dar
note: UV repair and recombination protein; dar; ATPase; monomeric DNA-DNA, RNA-DNA helicase; functional homologue of the E. coli RecG protein; recombination protein implicated in replication fork regression and Holliday junction branch migration
codon start: 1
transl table: 11
product: DNA helicase
translation: MDIKVHFHDFSHVRIDCEESTFHELRDFFSFEADGYRFNPRFRYGNWDGRIRLLDYNRLLPFGLVGQIKKFCDNFGYKAWIDPQINEKEELSRKDFDEWLSKLEIYSGNKRIEPHWYQKDAVFEGLVNRRRILNLPTSAGKSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYRLFSHAMIKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKEWFSQFGMMMNDECHLATGKSISSIISGLNNCMFKFGLSGSLRDGKANIMQYVGMFGEIFKPVTTSKLMEDGQVTELKINSIFLRYPDEFTTKLKGKTYQEEIKIITGLSKRNKWIAKLAIKLAQKDENAFVMFKHVSHGKAIFDLIKNEYDKVYYVSGEVDTETRNIMKTLAENGKGIIIVASYGVFSTGISVKNLHHVVLAHGVKSKIIVLQTIGRVLRKHGSKTIATVWDLIDSAGVKPKSANTKKKYVHLNYLLKHGIDRIQRYADEKFNYVMKTVNLISFGPLEKKMLLEFKQFLYEASIDEFMGKIASCQTLEGLEELEAYYKKRVKETELKDTDDISVRDALAGKRAELEDSDDEVEESF
SIO_010081: T4p184
subclass of: SO_0000673
so part of: T4p184
location: 112677..114440
location: region:112677-114440:1
so has part: feature:112677-114440:1:exon

NP_049796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112677-114440:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 2681598
note: sequence discrepancies were found for this section of the genome; entry BAT4INH was deemed more accurate than entry PT4UVSWD, based on a personal communication with Ken Kreuzer (3/19/90)
so part of: sequence
location: 112677..114440
location: region:112677-114440:1
so has part: feature:112677-114440:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:112677-114440:1:region

T4p185
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: W.1
gene: uvsY.-2
locus tag: T4p185
gene synonym: W.1
so part of: sequence
location: complement(114496..114663)
location: region:114496-114663:-1
so has part: feature:114496-114663:-1:exon
subclass of: SO_0000010

1258691
type: Gene
SIO_000068: ncbigene

position:114496:-1
position: 114496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114663:-1
position: 114663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114496-114663:-1:exon

T4p185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: W.1
gene: uvsY.-2
locus tag: T4p185
gene synonym: W.1
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDKICVVCKTPIDSALVVETDKGPVHPGPCYNYIKELPVSESSEEQLNETQLLL
SIO_010081: T4p185
subclass of: SO_0000673
so part of: T4p185
location: complement(114496..114663)
location: region:114496-114663:-1
so has part: feature:114496-114663:-1:exon

NP_049797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114496-114663:-1:exon

T4p186
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: W.2
gene: uvsY.-1
locus tag: T4p186
gene synonym: W.2
so part of: sequence
location: complement(114690..114914)
location: region:114690-114914:-1
so has part: feature:114690-114914:-1:exon
subclass of: SO_0000010

1258728
type: Gene
SIO_000068: ncbigene

position:114690:-1
position: 114690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114914:-1
position: 114914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114690-114914:-1:exon

T4p186
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: W.2
gene: uvsY.-1
locus tag: T4p186
gene synonym: W.2
codon start: 1
transl table: 11
product: UvsY.-1 conserved hypothetical protein
translation: MRYSIDDAFNYEEEFETEIQFLMKKHNLKRQDIRILADHPCGEDVLYIKGKFAGYLDEYFYSKDMGIDMHMRVV
SIO_010081: T4p186
subclass of: SO_0000673
so part of: T4p186
location: complement(114690..114914)
location: region:114690-114914:-1
so has part: feature:114690-114914:-1:exon

NP_049798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114690-114914:-1:exon

T4p187
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: fdsB
gene: uvsY
locus tag: T4p187
gene synonym: fdsB
so part of: sequence
location: complement(114914..115327)
location: region:114914-115327:-1
so has part: feature:114914-115327:-1:exon
subclass of: SO_0000010

1258547
type: Gene
SIO_000068: ncbigene

position:115327:-1
position: 115327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114914-115327:-1:exon

T4p187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: fdsB
gene: uvsY
locus tag: T4p187
gene synonym: fdsB
note: recombination protein; facilitates UvsX and inhibitor of EndoVII
codon start: 1
transl table: 11
product: UvsY-like recombination mediator
translation: MRLEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARLDYYSGRGDGDEFSMDRYEKSEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAFEAGK
SIO_010081: T4p187
subclass of: SO_0000673
so part of: T4p187
location: complement(114914..115327)
location: region:114914-115327:-1
so has part: feature:114914-115327:-1:exon

NP_049799.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114914-115327:-1:exon

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 2681598
note: DNA replication origin oriF (oriuvsY); (-) strand direction; primer RNA is same as transcript for gene uvsY; origin placed a 50 bases from start of middle transcript from promoter Pm115371
so part of: sequence
location: 115321
location: region:115321-115321:1
so has part: feature:115321-115321:1:region

position:115321:1
position: 115321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115321-115321:1:region

T4p188
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 25
locus tag: T4p188
so part of: sequence
location: complement(115404..115802)
location: region:115404-115802:-1
so has part: feature:115404-115802:-1:exon
subclass of: SO_0000010

1258633
type: Gene
SIO_000068: ncbigene

position:115404:-1
position: 115404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115802:-1
position: 115802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115404-115802:-1:exon

T4p188
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 25
locus tag: T4p188
note: gp25; 15k lysozyme; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; gp25 is a baseplate wedge subunit required for tail formation; has lysozyme activity; distantly related to baseplate wedge subunit gpW in P2-like phages
codon start: 1
transl table: 11
product: baseplate wedge subunit
translation: MANINKLYSDIDPEMKMDWNKDVSRSLGLRSIKNSLLGIITTRKGSRPFDPEFGCDLSDQLFENMTPLTADTVERNIESAVRNYEPRIDKLAVNVIPVYDDYTLIVEIRFSVIDNPDDIEQIKLQLASSNRV
SIO_010081: T4p188
subclass of: SO_0000673
so part of: T4p188
location: complement(115404..115802)
location: region:115404-115802:-1
so has part: feature:115404-115802:-1:exon

NP_049800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115404-115802:-1:exon

T4p189
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 26
locus tag: T4p189
so part of: sequence
location: complement(115802..116428)
location: region:115802-116428:-1
so has part: feature:115802-116428:-1:exon
subclass of: SO_0000010

1258552
type: Gene
SIO_000068: ncbigene

position:116428:-1
position: 116428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115802-116428:-1:exon

T4p189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 26
locus tag: T4p189
codon start: 1
transl table: 11
product: baseplate hub
translation: MYEYKFDVRVGSKIINCRAFTLKEYLELITAKNNGSVEVIVKKLIKDCTNAKDLNRQESELLLIHLWAHSLGEVNHENSWKCTCGTEIPTHINLLHTQIDAPEDLWYTLGDIKIKFRYPKIFDDKNIAHMIVSCIETIHANGESIPVEDLNEKELEDLYSIITESDIVAIKDMLLKPTVYLAVPIKCPECGKTHAHVIRGLKEFFELL
SIO_010081: T4p189
subclass of: SO_0000673
so part of: T4p189
location: complement(115802..116428)
location: region:115802-116428:-1
so has part: feature:115802-116428:-1:exon

NP_049801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115802-116428:-1:exon

T4p190
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 26'
locus tag: T4p190
so part of: sequence
location: complement(115802..116089)
location: region:115802-116089:-1
so has part: feature:115802-116089:-1:exon
subclass of: SO_0000010

1258644
type: Gene
SIO_000068: ncbigene

position:116089:-1
position: 116089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115802-116089:-1:exon

T4p190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 26'
locus tag: T4p190
codon start: 1
transl table: 11
product: baseplate hub
translation: MKFRYPKIFDDKNIAHMIVSCIETIHANGESIPVEDLNEKELEDLYSIITESDIVAIKDMLLKPTVYLAVPIKCPECGKTHAHVIRGLKEFFELL
SIO_010081: T4p190
subclass of: SO_0000673
so part of: T4p190
location: complement(115802..116089)
location: region:115802-116089:-1
so has part: feature:115802-116089:-1:exon

NP_813811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115802-116089:-1:exon

T4p191
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 51
locus tag: T4p191
so part of: sequence
location: 116479..117228
location: region:116479-117228:1
so has part: feature:116479-117228:1:exon
subclass of: SO_0000010

1258640
type: Gene
SIO_000068: ncbigene

position:116479:1
position: 116479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117228:1
position: 117228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116479-117228:1:exon

T4p191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 51
locus tag: T4p191
note: gp51; chaperone; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp51 catalyzes assembly of the hub
codon start: 1
transl table: 11
product: baseplate hub assembly protein
translation: MANIIRCKLPDGVHRFKPFTVEDYRDFLLVRNDIEHRSPQEQKQIITDLIDDYFGDYPKTWQPFIFLQVFVGSIGKTKSTVTFICPKCKKEKTVPFEIYQKELKDLVFDVANVKIKLKFPSEFYENKAKMITENIHSVQVDEIWYDWKEISESSQIELVDAIEIETLEKILDAMNPINLTLHMSCCNKYIKKYTDIVDVFKLLVNPDEIFTFYQINHTLVKSNYSLNSISKMIPAERGFVLKLIEKDKQ
SIO_010081: T4p191
subclass of: SO_0000673
so part of: T4p191
location: 116479..117228
location: region:116479-117228:1
so has part: feature:116479-117228:1:exon

NP_049802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116479-117228:1:exon

T4p192
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 27
locus tag: T4p192
so part of: sequence
location: 117228..118403
location: region:117228-118403:1
so has part: feature:117228-118403:1:exon
subclass of: SO_0000010

1258643
type: Gene
SIO_000068: ncbigene

position:118403:1
position: 118403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117228-118403:1:exon

T4p192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 27
locus tag: T4p192
note: gp27; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp27 is a component of the hub
codon start: 1
transl table: 11
product: baseplate hub
translation: MSMLQRPGYPNLSVKLFDSYDAWSNNRFVELAATITTLTMRDSLYGRNEGMLQFYDSKNIHTKMDGNEIIQISVANANDINNVKTRIYGCKHFSVSVDSKGDNIIAIELGTIHSIENLKFGRPFFPDAGESIKEMLGVIYQDRTLLTPAINAINAYVPDIPWTSTFENYLSYVREVALAVGSDKFVFVWQDIMGVNMMDYDMMINQEPYPMIVGEPSLIGQFIQELKYPLAYDFVWLTKSNPHKRDPMKNATIYAHSFLDSSIPMITTGKGENSIVVSRSGAYSEMTYRNGYEEAIRLQTMAQYDGYAKCSTIGNFNLTPGVKIIFNDSKNQFKTEFYVDEVIHELSNNNSVTHLYMFTNATKLETIDPVKVKNEFKSDTTTEESSSSNKQ
SIO_010081: T4p192
subclass of: SO_0000673
so part of: T4p192
location: 117228..118403
location: region:117228-118403:1
so has part: feature:117228-118403:1:exon

NP_049803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117228-118403:1:exon

T4p193
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 28
locus tag: T4p193
so part of: sequence
location: 118348..118881
location: region:118348-118881:1
so has part: feature:118348-118881:1:exon
subclass of: SO_0000010

1258697
type: Gene
SIO_000068: ncbigene

position:118348:1
position: 118348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118881:1
position: 118881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118348-118881:1:exon

T4p193
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 28
locus tag: T4p193
note: N-terminal amino acid sequence determined for the gp28 hub subunit by F. Arisaka et al., Department of Molecular and Cellular Assembly, Tokyo Institute of Technology, Yokohama 226-8501, Japan; Unpublished observation
codon start: 1
transl table: 11
product: baseplate hub distal subunit
translation: MNLNLILPLKKVVLPISNKEVSIPKMGLKHYNILKDVKGPDENLKLLIDSICPNLSPAEVDFVSIHLLEFNGKIKSRKEIDGYTYDINDVYVCQRLEFQYQGNTFYFRPPGKFEQFLTVSDMLSKCLLRVNDEVKEINFLEMPAFVLKWANDIFTTLAIPGPNGPITGIGNIIGLFE
SIO_010081: T4p193
subclass of: SO_0000673
so part of: T4p193
location: 118348..118881
location: region:118348-118881:1
so has part: feature:118348-118881:1:exon

NP_049804.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118348-118881:1:exon

T4p194
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 29
locus tag: T4p194
so part of: sequence
location: 118878..120650
location: region:118878-120650:1
so has part: feature:118878-120650:1:exon
subclass of: SO_0000010

1258641
type: Gene
SIO_000068: ncbigene

position:118878:1
position: 118878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120650:1
position: 120650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118878-120650:1:exon

T4p194
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 29
locus tag: T4p194
codon start: 1
transl table: 11
product: baseplate hub subunit and tail length
translation: MKKPQEMQTMRRKVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTSAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTAGIQQTGTSLATVESAIPVKVVEDDTAESVGPLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMIHFKYWSDKFSKAWDLFSTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTVAIVEGLGKVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAEGLDKISNWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKKNQPNAKPETSAKSPEAKQVQVIEKNKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN
SIO_010081: T4p194
subclass of: SO_0000673
so part of: T4p194
location: 118878..120650
location: region:118878-120650:1
so has part: feature:118878-120650:1:exon

NP_049805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118878-120650:1:exon

T4p195
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 48
locus tag: T4p195
so part of: sequence
location: 120659..121753
location: region:120659-121753:1
so has part: feature:120659-121753:1:exon
subclass of: SO_0000010

1258551
type: Gene
SIO_000068: ncbigene

position:120659:1
position: 120659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121753:1
position: 121753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120659-121753:1:exon

T4p195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 48
locus tag: T4p195
note: tail tube accessory protein; gp48; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp48 and gp54 create a platform on top of the hub that initiates oligomerization of gp19 subunits into the tail tube
codon start: 1
transl table: 11
product: baseplate tail tube cap
translation: MAIVKEITADLIKKSGEKISAGQSTKSEVGTKTYTAQFPTGRASGNDTTEDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILRTARNTISSTVSKLSNGLISNNNSGTISKSPIANILLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTVWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF
SIO_010081: T4p195
subclass of: SO_0000673
so part of: T4p195
location: 120659..121753
location: region:120659-121753:1
so has part: feature:120659-121753:1:exon

NP_049806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120659-121753:1:exon

T4p196
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 54
locus tag: T4p196
so part of: sequence
location: 121753..122715
location: region:121753-122715:1
so has part: feature:121753-122715:1:exon
subclass of: SO_0000010

1258631
type: Gene
SIO_000068: ncbigene

position:122715:1
position: 122715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121753-122715:1:exon

T4p196
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 54
locus tag: T4p196
note: gp54; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; gp48 and gp54 create a platform on top of the hub that initiates oligomerization of gp19 subunits into the tail tube
codon start: 1
transl table: 11
product: tail tube
translation: MYSLEEFNNQAINADFQRNNMFSCVFATTPSTKSSSLISSISNFSYNNLGLNSDWLGLTQGDINQGITTLITAGTQKLIRKSGVSKYLIGAMSQRTVQSLLGSFTVGTYLIDFFNMAYNSSGLMIYSVKMPENRLSYETDWNYNSPNIRITGRELDPLVISFRMDSEACNYRAMQDWVNSVQDPVTGLRALPQDVEADIQVNLHSRNGLPHTAVMFTMHSISVSAPELSYDGDNQITTFDVTFAYRVMQAGAVDRQRALEWLESAAINGIQSVLGNSGGVTGLSNSLSRLSRLGGTAGSISNINTMTGIVNSQSKILGAI
SIO_010081: T4p196
subclass of: SO_0000673
so part of: T4p196
location: 121753..122715
location: region:121753-122715:1
so has part: feature:121753-122715:1:exon

NP_049807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121753-122715:1:exon

T4p197
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: alt.-3
locus tag: T4p197
so part of: sequence
location: complement(122742..123032)
location: region:122742-123032:-1
so has part: feature:122742-123032:-1:exon
subclass of: SO_0000010

1258565
type: Gene
SIO_000068: ncbigene

position:122742:-1
position: 122742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123032:-1
position: 123032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122742-123032:-1:exon

T4p197
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: alt.-3
locus tag: T4p197
codon start: 1
transl table: 11
product: Alt.-3 conserved hypothetical protein
translation: MKSSLRFLGQELVVEGVIPADNAFNEAVYDEFIKIFGTDKKFGIFPSENFSKPEQTESIFQGVVTGKFESEAPVKIEVYIEDSLVASVAAFISFRK
SIO_010081: T4p197
subclass of: SO_0000673
so part of: T4p197
location: complement(122742..123032)
location: region:122742-123032:-1
so has part: feature:122742-123032:-1:exon

NP_049808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122742-123032:-1:exon

T4p198
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: alt.-2
locus tag: T4p198
so part of: sequence
location: complement(123065..123268)
location: region:123065-123268:-1
so has part: feature:123065-123268:-1:exon
subclass of: SO_0000010

1258689
type: Gene
SIO_000068: ncbigene

position:123065:-1
position: 123065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123268:-1
position: 123268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123065-123268:-1:exon

T4p198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: alt.-2
locus tag: T4p198
note: alt.-1 and alt.-2 together reflect an old duplication of the first part of gene alt, into which a stop codon and new start have been inserted, function unknown
codon start: 1
transl table: 11
product: Alt.-2 hypothetical protein
translation: MMHIVMIGVNEKLSLVKLKNLGGNPIGVINAVFDTALQTMKQYKIDACLLRVLKSSKCSLQVPRVVL
SIO_010081: T4p198
subclass of: SO_0000673
so part of: T4p198
location: complement(123065..123268)
location: region:123065-123268:-1
so has part: feature:123065-123268:-1:exon

NP_049809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123065-123268:-1:exon

T4p199
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 54.1
gene: alt.-1
locus tag: T4p199
gene synonym: 54.1
so part of: sequence
location: complement(123265..123450)
location: region:123265-123450:-1
so has part: feature:123265-123450:-1:exon
subclass of: SO_0000010

1258764
type: Gene
SIO_000068: ncbigene

position:123265:-1
position: 123265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123450:-1
position: 123450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123265-123450:-1:exon

T4p199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 54.1
gene: alt.-1
locus tag: T4p199
gene synonym: 54.1
note: alt.-1 and alt.-2 together appear to be a duplication of the first part of gene alt, into which a stop codon and new start have been inserted; function unknown
codon start: 1
transl table: 11
product: Alt.-1 hypothetical protein
translation: MELITELFDGASAPVVTLNPKHKIPQIFAIQAGEESVLPGFRFCTYTSGGDTNKTLNQAIK
SIO_010081: T4p199
subclass of: SO_0000673
so part of: T4p199
location: complement(123265..123450)
location: region:123265-123450:-1
so has part: feature:123265-123450:-1:exon

NP_049810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123265-123450:-1:exon

T4p200
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: alt
locus tag: T4p200
so part of: sequence
location: complement(123454..125502)
location: region:123454-125502:-1
so has part: feature:123454-125502:-1:exon
subclass of: SO_0000010

1258760
type: Gene
SIO_000068: ncbigene

position:123454:-1
position: 123454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125502:-1
position: 125502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123454-125502:-1:exon

T4p200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: alt
locus tag: T4p200
note: Alt; gpAlt; present in T4 capsid and enters the host with the infecting DNA; mono-ADP-ribosyltransferase that targets arginine residues; efficiently ADP-ribosylates alpha subunit of host RNA polymerase, which is thought to enhance transcription from T4 early promoters
codon start: 1
transl table: 11
product: Alt-like RNA polymerase ADP-ribosyltransferase
translation: MELITELFDEDTTLPITNLYPKKKIPQIFSVHVDDAIEQPGFRLCTYTSGGDTNRDLKMGDKMMHIVPFTLTAKGSIAKLKGLGPSPINYINSVFTVAMQTMRQYKIDACMLRILKSKTAGQARQIQVIADRLIRSRSGGRYVLLKELWDYDKKYAYILIHRKNVSLEDIPGVPEISTELFTKVESKVGDVYINKDTGAQVTKNEAIAASIAQENDKRSDQAVIVKVKISRRAIAQSQSLESSRFETPMFQKFEASAAELNKPADAPLISDSNELTVISTSGFALENALSSVTAGMAFREASIIPEDKESIINAEIKNKALERLRKESITSIKTLETIASIVDDTLEKYKGAWFERNINKHSHLNQDAANELVQNSWNAIKTKIIRRELRGYALTAGWSLHPIVENKDSSKYTPAQKRGIREYVGSGYVDINNALLGLYNPDERTSILTASDIEKAIDNLDSAFKNGERLPKGITLYRSQRMLPSIYEAMVKNRVFYFRNFVSTSLYPNIFGTWMTDSSIGVLPDEKRLSVSIDKTDEGLVNSSDNLVGIGWVITGADKVNVVLPGGSLAPSNEMEVILPRGLMVKVNKITDASYNDGTVKTNNKLIQAEVMTTEELTESVIYDGDHLMETGELVTMTGDIEDRVDFASFVSSNVKQKVESSLGIIASCIDIANMPYKFVQG
SIO_010081: T4p200
subclass of: SO_0000673
so part of: T4p200
location: complement(123454..125502)
location: region:123454-125502:-1
so has part: feature:123454-125502:-1:exon

NP_049811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123454-125502:-1:exon

T4p201
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: alt.1
locus tag: T4p201
so part of: sequence
location: complement(125560..125748)
location: region:125560-125748:-1
so has part: feature:125560-125748:-1:exon
subclass of: SO_0000010

1258682
type: Gene
SIO_000068: ncbigene

position:125560:-1
position: 125560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125748:-1
position: 125748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125560-125748:-1:exon

T4p201
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: alt.1
locus tag: T4p201
codon start: 1
transl table: 11
product: Alt.1 conserved hypothetical protein
translation: MKAYLETIVVAQKEGGDVSTSVSQIMIEFIDAYAYNKFTETFDAYEKGPKFEIYRTLLPIDY
SIO_010081: T4p201
subclass of: SO_0000673
so part of: T4p201
location: complement(125560..125748)
location: region:125560-125748:-1
so has part: feature:125560-125748:-1:exon

NP_049812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125560-125748:-1:exon

T4p202
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: lig
gene: 30
locus tag: T4p202
gene synonym: lig
so part of: sequence
location: complement(125745..127208)
location: region:125745-127208:-1
so has part: feature:125745-127208:-1:exon
subclass of: SO_0000010

1258680
type: Gene
SIO_000068: ncbigene

position:125745:-1
position: 125745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127208:-1
position: 127208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125745-127208:-1:exon

T4p202
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: lig
gene: 30
locus tag: T4p202
gene synonym: lig
note: ATP-dependent DNA ligase; gp30; lig; ATP-dependent DNA ligase; catalyzes formation of a phosphodiester bond between juxtaposed 5' phosphate and 3' hydroxyl termini in duplex DNA or RNA; joins blunt and cohesive ends and repairs single stranded nicks in duplex DNA, RNA or DNA/RNA hybrids; necessary during T4 replication to ligate individual lagging strand DNA synthesis fragments into a continuous polymer
codon start: 1
transl table: 11
product: DNA ligase
translation: MILKILNEIASIGSTKQKQAILEKNKDNELLKRVYRLTYSRGLQYYIKKWPKPGIATQSFGMLTLTDMLDFIEFTLATRKLTGNAAIEELTGYITDGKKDDVEVLRRVMMRDLECGASVSIANKVWPGLIPEQPQMLASSYDEKGINKNIKFPAFAQLKADGARCFAEVRGDELDDVRLLSRAGNEYLGLDLLKEELIKMTAEARQIHPEGVLIDGELVYHEQVKKEPEGLDFLFDAYPENSKAKEFAEVAESRTASNGIANKSLKGTISEKEAQCMKFQVWDYVPLVEIYSLPAFRLKYDVRFSKLEQMTSGYDKVILIENQVVNNLDEAKVIYKKYIDQGLEGIILKNIDGLWENARSKNLYKFKEVIDVDLKIVGIYPHRKDPTKAGGFILESECGKIKVNAGSGLKDKAGVKSHELDRTRIMENQNYYIGKILECECNGWLKSDGRTDYVKLFLPIAIRLREDKTKANTFEDVFGDFHEVTGL
SIO_010081: T4p202
subclass of: SO_0000673
so part of: T4p202
location: complement(125745..127208)
location: region:125745-127208:-1
so has part: feature:125745-127208:-1:exon

NP_049813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125745-127208:-1:exon

T4p203
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 30.1
locus tag: T4p203
so part of: sequence
location: complement(127205..127474)
location: region:127205-127474:-1
so has part: feature:127205-127474:-1:exon
subclass of: SO_0000010

1258603
type: Gene
SIO_000068: ncbigene

position:127205:-1
position: 127205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127474:-1
position: 127474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127205-127474:-1:exon

T4p203
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 30.1
locus tag: T4p203
codon start: 1
transl table: 11
product: DUF3045 domain-containing protein
translation: MFVVHTIYENEGNTTRDYGHVNQFFRCNPEFRAQKDERIFKKCVEQGFIYIKHWMQGNKVRTTYHRSLTELNDELIYNRAVNQTLKDEQ
SIO_010081: T4p203
subclass of: SO_0000673
so part of: T4p203
location: complement(127205..127474)
location: region:127205-127474:-1
so has part: feature:127205-127474:-1:exon

NP_049814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127205-127474:-1:exon

T4p204
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 30.2
locus tag: T4p204
so part of: sequence
location: complement(127474..128310)
location: region:127474-128310:-1
so has part: feature:127474-128310:-1:exon
subclass of: SO_0000010

1258676
type: Gene
SIO_000068: ncbigene

position:128310:-1
position: 128310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127474-128310:-1:exon

T4p204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 30.2
locus tag: T4p204
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPTILTDIDGVCLSWQSGLPYFAQKYNLPLEHILKMIQDEKFISPGKLFNCDEELGVKLIEKYNRSDFIRYLSPYKDALCVINKLKEDYNFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCSHDSSKEELFKKAKEKYNVICYIDDLAHHCDHASEILRVPVYWMARGERDNIPKTAQRVYTWNDVENKLFSPKENKESFDSEKAIKDVIEKMIKNDSFPWNTTWRTPGFNPYNPYHPYQTHPFQTWNYIKPGGIEYLYNRPTCGDNIFQGAF
SIO_010081: T4p204
subclass of: SO_0000673
so part of: T4p204
location: complement(127474..128310)
location: region:127474-128310:-1
so has part: feature:127474-128310:-1:exon

NP_049815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127474-128310:-1:exon

T4p205
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 30.3
locus tag: T4p205
so part of: sequence
location: complement(128307..128765)
location: region:128307-128765:-1
so has part: feature:128307-128765:-1:exon
subclass of: SO_0000010

1258574
type: Gene
SIO_000068: ncbigene

position:128307:-1
position: 128307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128765:-1
position: 128765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128307-128765:-1:exon

T4p205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 30.3
locus tag: T4p205
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSELEIRSNFRWPSCALSNFAQWPFVMDGIQFGGLEGFLQGCKVKNVEQQRRIFGLSGLAAQQAGRSYARAQDRGTLFWLGVPFSRYSPAWKELYTNAYFEAAIQNKGFRDALQASKGKVLKHSIASGLTKDDTILTEAEFIDVLNLLRDSL
SIO_010081: T4p205
subclass of: SO_0000673
so part of: T4p205
location: complement(128307..128765)
location: region:128307-128765:-1
so has part: feature:128307-128765:-1:exon

NP_049816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128307-128765:-1:exon

T4p206
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 30.3'
locus tag: T4p206
so part of: sequence
location: complement(128402..128629)
location: region:128402-128629:-1
so has part: feature:128402-128629:-1:exon
subclass of: SO_0000010

1258625
type: Gene
SIO_000068: ncbigene

position:128402:-1
position: 128402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128629:-1
position: 128629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128402-128629:-1:exon

T4p206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 30.3'
locus tag: T4p206
note: internal translation, in a different reading frame, within gene 30.3
codon start: 1
transl table: 11
product: gp30.3' hypothetical protein
translation: MLNNNVVYLGYPGLPPNKLEGLMLELRTVGPSFGLEFRFQDTPRRGKNYTQMHILKQRFKTRAFVMHYKPRKEKF
SIO_010081: T4p206
subclass of: SO_0000673
so part of: T4p206
location: complement(128402..128629)
location: region:128402-128629:-1
so has part: feature:128402-128629:-1:exon

NP_049817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128402-128629:-1:exon

T4p207
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 30.4
locus tag: T4p207
so part of: sequence
location: complement(128758..128964)
location: region:128758-128964:-1
so has part: feature:128758-128964:-1:exon
subclass of: SO_0000010

1258714
type: Gene
SIO_000068: ncbigene

position:128758:-1
position: 128758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128964:-1
position: 128964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128758-128964:-1:exon

T4p207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 30.4
locus tag: T4p207
codon start: 1
transl table: 11
product: gp30.4 conserved hypothetical protein
translation: MNIINKIFGIQYIKVTYKVTDKNPYTDEHEEPQVESIILERDPNWPVEFRLPCYGHWADVEIISIENV
SIO_010081: T4p207
subclass of: SO_0000673
so part of: T4p207
location: complement(128758..128964)
location: region:128758-128964:-1
so has part: feature:128758-128964:-1:exon

NP_049818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128758-128964:-1:exon

T4p208
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 30.5
locus tag: T4p208
so part of: sequence
location: complement(128961..129158)
location: region:128961-129158:-1
so has part: feature:128961-129158:-1:exon
subclass of: SO_0000010

1258766
type: Gene
SIO_000068: ncbigene

position:128961:-1
position: 128961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129158:-1
position: 129158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128961-129158:-1:exon

T4p208
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 30.5
locus tag: T4p208
codon start: 1
transl table: 11
product: gp30.5 hypothetical protein
translation: MKFFLGQTVELKGVGIPGLISKVLPPFKWSGIQIKEAYIVSWVDGNEDLRMGDELSPIYGLKELV
SIO_010081: T4p208
subclass of: SO_0000673
so part of: T4p208
location: complement(128961..129158)
location: region:128961-129158:-1
so has part: feature:128961-129158:-1:exon

NP_049819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128961-129158:-1:exon

T4p209
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 30.6
locus tag: T4p209
so part of: sequence
location: complement(129158..129445)
location: region:129158-129445:-1
so has part: feature:129158-129445:-1:exon
subclass of: SO_0000010

1258670
type: Gene
SIO_000068: ncbigene

position:129445:-1
position: 129445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129158-129445:-1:exon

T4p209
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 30.6
locus tag: T4p209
codon start: 1
transl table: 11
product: gp30.6 conserved hypothetical protein
translation: MFMTTYFDTRKNFCEVVFSKAPKDLPAHLQLTSESIKNYVDVVCPLEFRTVNGRDTLAITKLNREIDIDPSIAREINISDIGGGNVKSHGFQMRF
SIO_010081: T4p209
subclass of: SO_0000673
so part of: T4p209
location: complement(129158..129445)
location: region:129158-129445:-1
so has part: feature:129158-129445:-1:exon

NP_049820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129158-129445:-1:exon

T4p210
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 30.7
locus tag: T4p210
so part of: sequence
location: complement(129487..129852)
location: region:129487-129852:-1
so has part: feature:129487-129852:-1:exon
subclass of: SO_0000010

1258645
type: Gene
SIO_000068: ncbigene

position:129487:-1
position: 129487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129852:-1
position: 129852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129487-129852:-1:exon

T4p210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 30.7
locus tag: T4p210
codon start: 1
transl table: 11
product: gp30.7 conserved hypothetical protein
translation: MNYINFERKYVSNGIAGSIDTICLWKHQNGSVCEIEQYMTPNYVYMRFENGITVSITMKGSNFKIALDDDFRQRDLGTHPCWNGANRKLLVKTWIRHILSNRAKPEHLEAIFDVVLNEFDI
SIO_010081: T4p210
subclass of: SO_0000673
so part of: T4p210
location: complement(129487..129852)
location: region:129487-129852:-1
so has part: feature:129487-129852:-1:exon

NP_049821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129487-129852:-1:exon

T4p211
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 31.-3
gene: 30.8
locus tag: T4p211
gene synonym: 31.-3
so part of: sequence
location: complement(129921..130253)
location: region:129921-130253:-1
so has part: feature:129921-130253:-1:exon
subclass of: SO_0000010

1258743
type: Gene
SIO_000068: ncbigene

position:129921:-1
position: 129921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130253:-1
position: 130253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129921-130253:-1:exon

T4p211
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 31.-3
gene: 30.8
locus tag: T4p211
gene synonym: 31.-3
codon start: 1
transl table: 11
product: gp30.8 conserved hypothetical protein
translation: MKTINLNAAVKTKCFNGKYDETMWFLMAVEGDIIEVETTEGMGTDFTFTIQVHNFFTGWIYELNTVIVGKIEQNELGEWHYVTARQRAERLIEKMKKVGKLDMQHWKVVK
SIO_010081: T4p211
subclass of: SO_0000673
so part of: T4p211
location: complement(129921..130253)
location: region:129921-130253:-1
so has part: feature:129921-130253:-1:exon

NP_049822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129921-130253:-1:exon

T4p212
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 31.-2
gene: 30.9
locus tag: T4p212
gene synonym: 31.-2
so part of: sequence
location: complement(130364..130540)
location: region:130364-130540:-1
so has part: feature:130364-130540:-1:exon
subclass of: SO_0000010

1258718
type: Gene
SIO_000068: ncbigene

position:130364:-1
position: 130364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130540:-1
position: 130540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130364-130540:-1:exon

T4p212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 31.-2
gene: 30.9
locus tag: T4p212
gene synonym: 31.-2
codon start: 1
transl table: 11
product: gp30.9 conserved hypothetical protein
translation: MAKQAKAKKAVEKKVGDSKRAGYKRGSNSRINQTVEKIMRRARAVLRDDASRFGKQKA
SIO_010081: T4p212
subclass of: SO_0000673
so part of: T4p212
location: complement(130364..130540)
location: region:130364-130540:-1
so has part: feature:130364-130540:-1:exon

NP_049823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130364-130540:-1:exon

T4p213
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 31.-1
gene: rIII
locus tag: T4p213
gene synonym: 31.-1
so part of: sequence
location: complement(130785..131033)
location: region:130785-131033:-1
so has part: feature:130785-131033:-1:exon
subclass of: SO_0000010

1258761
type: Gene
SIO_000068: ncbigene

position:130785:-1
position: 130785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131033:-1
position: 131033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130785-131033:-1:exon

T4p213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 31.-1
gene: rIII
locus tag: T4p213
gene synonym: 31.-1
codon start: 1
transl table: 11
product: lysis inhibition; accessory protein
translation: MIKQLQHALELQRNAWNNGHENYGASIDVEAEALEILRYFKHLNPAQTALAAELQEKDELKYAKPLASAARKAVRHFVVTLK
SIO_010081: T4p213
subclass of: SO_0000673
so part of: T4p213
location: complement(130785..131033)
location: region:130785-131033:-1
so has part: feature:130785-131033:-1:exon

NP_049824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130785-131033:-1:exon

T4p214
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 31
locus tag: T4p214
so part of: sequence
location: complement(131181..131516)
location: region:131181-131516:-1
so has part: feature:131181-131516:-1:exon
subclass of: SO_0000010

1258757
type: Gene
SIO_000068: ncbigene

position:131181:-1
position: 131181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131516:-1
position: 131516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131181-131516:-1:exon

T4p214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 31
locus tag: T4p214
note: replaces GroES as cochaperone with GroEL for head (gp23) assembly and also affects topoisomerase
codon start: 1
transl table: 11
product: head morphogenesis
translation: MSEVQQLPIRAVGEYVILVSEPAQAGDEEVTESGLIIGKRVQGEVPELCVVHSVGPDVPEGFCEVGDLTSLPVGQIRNVPHPFVALGLKQPKEIKQKFVTCHYKAIPCLYK
SIO_010081: T4p214
subclass of: SO_0000673
so part of: T4p214
location: complement(131181..131516)
location: region:131181-131516:-1
so has part: feature:131181-131516:-1:exon

NP_049825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131181-131516:-1:exon

T4p215
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 31.1
locus tag: T4p215
so part of: sequence
location: complement(131573..131881)
location: region:131573-131881:-1
so has part: feature:131573-131881:-1:exon
subclass of: SO_0000010

1258664
type: Gene
SIO_000068: ncbigene

position:131573:-1
position: 131573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131881:-1
position: 131881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131573-131881:-1:exon

T4p215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 31.1
locus tag: T4p215
codon start: 1
transl table: 11
product: SH3 beta-barrel fold-containing protein
translation: MKLTTEQKVAIREILKTKLSMGVSNVVFEKSDGTIRTMKGTRDADFMPTMQTGKLTESTRKESTDMIPVFDVELGAWRGFSIDKLISVNGMKVEHLLQFIGK
SIO_010081: T4p215
subclass of: SO_0000673
so part of: T4p215
location: complement(131573..131881)
location: region:131573-131881:-1
so has part: feature:131573-131881:-1:exon

NP_049826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131573-131881:-1:exon

T4p216
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 31.2
locus tag: T4p216
so part of: sequence
location: complement(131882..132118)
location: region:131882-132118:-1
so has part: feature:131882-132118:-1:exon
subclass of: SO_0000010

1258801
type: Gene
SIO_000068: ncbigene

position:131882:-1
position: 131882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132118:-1
position: 132118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131882-132118:-1:exon

T4p216
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 31.2
locus tag: T4p216
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFRLVKLTAISSYSNENISFAVEYKKYFFSKWKQYYKTNWVCIDRPYSWKSDLEKCQKLLSTLKERGTTHIKTVIGK
SIO_010081: T4p216
subclass of: SO_0000673
so part of: T4p216
location: complement(131882..132118)
location: region:131882-132118:-1
so has part: feature:131882-132118:-1:exon

NP_049827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131882-132118:-1:exon

T4p217
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: cd
locus tag: T4p217
so part of: sequence
location: complement(132118..132699)
location: region:132118-132699:-1
so has part: feature:132118-132699:-1:exon
subclass of: SO_0000010

1258669
type: Gene
SIO_000068: ncbigene

position:132699:-1
position: 132699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132118-132699:-1:exon

T4p217
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: cd
locus tag: T4p217
note: allosteric enzyme activated by HM-dCTP and dCTP for dUMP synthesis; dCMP deaminase; part of the T4 enzyme pathway that takes nucleoside diphosphates (NDPs) and deoxynucleoside monophosphates (dNMPs) from host DNA breakdown and converts them into deoxynucleoside triphosphates (dNTPs) used in viral DNA replication; dCMP deaminase converts deoxycytidine 5'-monophosphate (dCMP) to deoxyuridine 5'-monophosphate
codon start: 1
transl table: 11
product: dCMP deaminase
translation: MKASTVLQIAYLVSQESKCCSWKVGAVIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKHAIIQGHKPECVSFGSTDRFVLAKEHRSAHSEWSSKNEIHAELNAILFAARNGSSIEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKNKPGWDDILRNAGIEVFNVPKKNLNKLNWENINEFCGE
SIO_010081: T4p217
subclass of: SO_0000673
so part of: T4p217
location: complement(132118..132699)
location: region:132118-132699:-1
so has part: feature:132118-132699:-1:exon

NP_049828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132118-132699:-1:exon

T4p218
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: cd.1
locus tag: T4p218
so part of: sequence
location: complement(132696..133034)
location: region:132696-133034:-1
so has part: feature:132696-133034:-1:exon
subclass of: SO_0000010

1258687
type: Gene
SIO_000068: ncbigene

position:132696:-1
position: 132696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133034:-1
position: 133034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132696-133034:-1:exon

T4p218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: cd.1
locus tag: T4p218
codon start: 1
transl table: 11
product: Cd.1 hypothetical protein
translation: MMNLTDIIDNCLENDTGDHRALDSETAQFIRITLMNDTLVNSIHPSVYDAIIVTKYPVELHKKMTGAVFIDKKNRFKDGQNIISSVIKSITKLRHEIYRVETAKSAYLVIMK
SIO_010081: T4p218
subclass of: SO_0000673
so part of: T4p218
location: complement(132696..133034)
location: region:132696-133034:-1
so has part: feature:132696-133034:-1:exon

NP_049829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132696-133034:-1:exon

T4p219
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: cd.2
locus tag: T4p219
so part of: sequence
location: complement(133031..133261)
location: region:133031-133261:-1
so has part: feature:133031-133261:-1:exon
subclass of: SO_0000010

1258734
type: Gene
SIO_000068: ncbigene

position:133031:-1
position: 133031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133261:-1
position: 133261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133031-133261:-1:exon

T4p219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: cd.2
locus tag: T4p219
codon start: 1
transl table: 11
product: Cd.2 conserved hypothetical protein
translation: MKNRLLLKEFQEKVKLFAQELVNKVSERFPETSVRVITETPRSVLVIVNPGDGDQISHLKLDFDGLVEAQRVYGVL
SIO_010081: T4p219
subclass of: SO_0000673
so part of: T4p219
location: complement(133031..133261)
location: region:133031-133261:-1
so has part: feature:133031-133261:-1:exon

NP_049830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133031-133261:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 2681598
note: inverted complement of previously reported sequence; corrects the early promoter Pe133295 between cd.2 and cd.3
so part of: sequence
location: 133300..133313
location: region:133300-133313:1
so has part: feature:133300-133313:1:region

position:133300:1
position: 133300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133313:1
position: 133313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133300-133313:1:region

T4p220
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: cd.3
locus tag: T4p220
so part of: sequence
location: complement(133334..133609)
location: region:133334-133609:-1
so has part: feature:133334-133609:-1:exon
subclass of: SO_0000010

1258599
type: Gene
SIO_000068: ncbigene

position:133334:-1
position: 133334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133609:-1
position: 133609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133334-133609:-1:exon

T4p220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: cd.3
locus tag: T4p220
codon start: 1
transl table: 11
product: Cd.3 conserved hypothetical protein
translation: MFPTYSKIVEVVFSQIIANNMFEKLDNAAELRIHAQVTHVLNTLLPDQVDSIAITLYPGSAHIIVVFGLDAELVIKGDIRFESQTAEFKAI
SIO_010081: T4p220
subclass of: SO_0000673
so part of: T4p220
location: complement(133334..133609)
location: region:133334-133609:-1
so has part: feature:133334-133609:-1:exon

NP_049831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133334-133609:-1:exon

T4p221
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: cd.4
locus tag: T4p221
so part of: sequence
location: complement(133612..133812)
location: region:133612-133812:-1
so has part: feature:133612-133812:-1:exon
subclass of: SO_0000010

1258735
type: Gene
SIO_000068: ncbigene

position:133612:-1
position: 133612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133812:-1
position: 133812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133612-133812:-1:exon

T4p221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: cd.4
locus tag: T4p221
codon start: 1
transl table: 11
product: Cd.4 conserved hypothetical protein
translation: MNNLEKIYRLCDKIEKEKKYLFCLWPIVDGRVGLDVLDYETEDRVDGSTFDNALDVIDWLEENYVR
SIO_010081: T4p221
subclass of: SO_0000673
so part of: T4p221
location: complement(133612..133812)
location: region:133612-133812:-1
so has part: feature:133612-133812:-1:exon

NP_049832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133612-133812:-1:exon

T4p222
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: cd.5
locus tag: T4p222
so part of: sequence
location: complement(133805..134032)
location: region:133805-134032:-1
so has part: feature:133805-134032:-1:exon
subclass of: SO_0000010

1258708
type: Gene
SIO_000068: ncbigene

position:133805:-1
position: 133805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134032:-1
position: 134032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133805-134032:-1:exon

T4p222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: cd.5
locus tag: T4p222
codon start: 1
transl table: 11
product: Cd.5 hypothetical protein
translation: MLASRFGRFLMAWHHETWAIVIVNSGLVGTSNGQFCVFTSENRAWEECLKLREKNPDVELVVKKTKLPLPWKTYE
SIO_010081: T4p222
subclass of: SO_0000673
so part of: T4p222
location: complement(133805..134032)
location: region:133805-134032:-1
so has part: feature:133805-134032:-1:exon

NP_049833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133805-134032:-1:exon

T4p223
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: pseT
locus tag: T4p223
so part of: sequence
location: complement(134002..134907)
location: region:134002-134907:-1
so has part: feature:134002-134907:-1:exon
subclass of: SO_0000010

1258796
type: Gene
SIO_000068: ncbigene

position:134002:-1
position: 134002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134907:-1
position: 134907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134002-134907:-1:exon

T4p223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: pseT
locus tag: T4p223
note: 5'-hydroxyl kinase, a 3'-phosphatase and a 2',3'-cyclic phosphodiesterase; catalyzes the transfer of the terminal phosphate of ATP to the 5'-hydroxyl termini of ribo- and deoxyribonucleotides; in the presence of ADP the enzyme also catalyzes the exchange of the 5' terminal phosphate from phosphorylated DNA to ADP; these activities modify the ends of nicked tRNA generated by a bacterial response to infection and facilitate repair by T4 RNA ligase
codon start: 1
transl table: 11
product: polynucleotide kinase
translation: MKKIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQFDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELVKRNSKRGTKAVPIDVLRSMYKSMREYLGLPVYNGTPGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASGDF
SIO_010081: T4p223
subclass of: SO_0000673
so part of: T4p223
location: complement(134002..134907)
location: region:134002-134907:-1
so has part: feature:134002-134907:-1:exon

NP_049834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134002-134907:-1:exon

T4p224
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: pseT.1
locus tag: T4p224
so part of: sequence
location: complement(134908..135135)
location: region:134908-135135:-1
so has part: feature:134908-135135:-1:exon
subclass of: SO_0000010

1258684
type: Gene
SIO_000068: ncbigene

position:134908:-1
position: 134908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135135:-1
position: 135135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134908-135135:-1:exon

T4p224
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: pseT.1
locus tag: T4p224
codon start: 1
transl table: 11
product: PseT.1 conserved hypothetical protein
translation: MISWHQFEHLKGLIYESEMAAMIYGRQIQRLESLPPTNDVLLAQSRANLKNEYQNKWGKASKDLHDYIQSLVEKK
SIO_010081: T4p224
subclass of: SO_0000673
so part of: T4p224
location: complement(134908..135135)
location: region:134908-135135:-1
so has part: feature:134908-135135:-1:exon

NP_049835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134908-135135:-1:exon

T4p225
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: pseT.2
locus tag: T4p225
so part of: sequence
location: complement(135132..135431)
location: region:135132-135431:-1
so has part: feature:135132-135431:-1:exon
subclass of: SO_0000010

1258607
type: Gene
SIO_000068: ncbigene

position:135132:-1
position: 135132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135431:-1
position: 135431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135132-135431:-1:exon

T4p225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: pseT.2
locus tag: T4p225
codon start: 1
transl table: 11
product: Rz-like spanin
translation: MIKLSAVILSIGLLVGCSTKPLEVKKETVHPNWPVQIKSYDEAKLSWQVKVIDGKAWVGMPFEDSQEFRIWLNDVKRYVHDQKTMXCYYRQELKEDKCK
SIO_010081: T4p225
subclass of: SO_0000673
so part of: T4p225
location: complement(135132..135431)
location: region:135132-135431:-1
so has part: feature:135132-135431:-1:exon

NP_049836.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135132-135431:-1:exon

T4p225
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 2681598
gene: pseT.2
locus tag: T4p225
note: Ile or Thr; Leu in PseT.2 of phage RB69, and a similar hydrophobic cluster is seen in PseT.2 of phage RB49 and Aeh1; could be Ile in T4 PseT.2; Region: uncertain residue
SIO_010081: T4p225
subclass of: SO_0000673
so part of: T4p225
location: complement(135174..135176)
location: region:135174-135176:-1
so has part: feature:135174-135176:-1:exon

position:135174:-1
position: 135174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135176:-1
position: 135176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135174-135176:-1:exon

unsure
type: Feature
subclass of: SO_0000001
RO_0002162: 2681598
replace: a
replace: g
so part of: sequence
location: 135175
location: region:135175-135175:1
so has part: feature:135175-135175:1:region

position:135175:1
position: 135175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135175-135175:1:region

T4p226
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: pseT.3
locus tag: T4p226
so part of: sequence
location: complement(135428..135781)
location: region:135428-135781:-1
so has part: feature:135428-135781:-1:exon
subclass of: SO_0000010

1258652
type: Gene
SIO_000068: ncbigene

position:135428:-1
position: 135428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135781:-1
position: 135781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135428-135781:-1:exon

T4p226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: pseT.3
locus tag: T4p226
codon start: 1
transl table: 11
product: Rz-like spanin
translation: MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK
SIO_010081: T4p226
subclass of: SO_0000673
so part of: T4p226
location: complement(135428..135781)
location: region:135428-135781:-1
so has part: feature:135428-135781:-1:exon

NP_049837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135428-135781:-1:exon

T4p227
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: unf
gene: alc
locus tag: T4p227
gene synonym: unf
so part of: sequence
location: complement(135772..136275)
location: region:135772-136275:-1
so has part: feature:135772-136275:-1:exon
subclass of: SO_0000010

1258715
type: Gene
SIO_000068: ncbigene

position:135772:-1
position: 135772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136275:-1
position: 136275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135772-136275:-1:exon

T4p227
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: unf
gene: alc
locus tag: T4p227
gene synonym: unf
note: attenuates elongation of transcription on cytosine-containing DNA, blocks transcription of host and other phages
codon start: 1
transl table: 11
product: inhibitor of host transcription
translation: MDLQLITTEMVVEAYGDTTDGISVFKGNRRVGYITGLKKDLAKQVKRKTTIKEYRNRRLEQARDMLPDAVEEMKVFLENQLAKYDCEVFINQTQPNVHINSCKCYIIVNPLTGKHRLGISNPNRSASDMAEDVEACFKISKSPAEHHILINGLSQDDIVEVIKTLCM
SIO_010081: T4p227
subclass of: SO_0000673
so part of: T4p227
location: complement(135772..136275)
location: region:135772-136275:-1
so has part: feature:135772-136275:-1:exon

NP_049838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135772-136275:-1:exon

T4p228
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 63
gene: rnlA
locus tag: T4p228
gene synonym: 63
so part of: sequence
location: complement(136340..137464)
location: region:136340-137464:-1
so has part: feature:136340-137464:-1:exon
subclass of: SO_0000010

1258717
type: Gene
SIO_000068: ncbigene

position:136340:-1
position: 136340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137464:-1
position: 137464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136340-137464:-1:exon

T4p228
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 63
gene: rnlA
locus tag: T4p228
gene synonym: 63
note: tail fiber attachment and RNA ligase for repair of tRNA in restrictive prr hosts, in conjunction with PseT; RNA ligase 1; gp63; catalyzes the ATP-dependent covalent joining of single-stranded 5'-phosphoryl termini of DNA or RNA to single-stranded 3'-hydroxyl termini of DNA or RNA; restores cleaved tRNA Lys during T4 infection; catalyst for attaching tail fibers
codon start: 1
transl table: 11
product: RNA ligase and tail fiber protein attachment catalyst
translation: MQELFNNLMELCKDSQRKFFYSDDVSASGRTYRIFSYNYASYSDWLLPDALECRGIMFEMDGEKPVRIASRPMEKFFNLNENPFTMNIDLNDVDYILTKEDGSLVSTYLDGDEILFKSKGSIKSEQALMANGILMNINHHRLRDRLKELAEDGFTANFEFVAPTNRIVLAYQEMKIILLNVRENETGEYISYDDIYKDATLRPYLVERYEIDSPKWIEEAKNAENIEGYVAVMKDGSHFKIKSDWYVSLHSTKSSLDNPEKLFKTIIDGASDDLKAMYADDEYSYRKIEAFETTYLKYLDRALFLVLDCHNKHCGKDRKTYAMEAQGVAKGAGMDHLFGIIMSLYQGYDSQEKVMCEIEQNFLKNYKKFIPEGY
SIO_010081: T4p228
subclass of: SO_0000673
so part of: T4p228
location: complement(136340..137464)
location: region:136340-137464:-1
so has part: feature:136340-137464:-1:exon

NP_049839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136340-137464:-1:exon

T4p229
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: denA
locus tag: T4p229
so part of: sequence
location: complement(137517..137951)
location: region:137517-137951:-1
so has part: feature:137517-137951:-1:exon
subclass of: SO_0000010

1258710
type: Gene
SIO_000068: ncbigene

position:137517:-1
position: 137517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137951:-1
position: 137951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137517-137951:-1:exon

T4p229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: denA
locus tag: T4p229
note: site-specific endonuclease II (EndoII) initiating degradation of cytosine-containing DNA; EndoII; DenA; nuclease that degrades host DNA; recognition sequence is 5'-CCGC-3'; EndoII nicks the complementary strand of the recognition sequence; modified T4 HMC DNA is resistant to cleavage
codon start: 1
transl table: 11
product: endonuclease
translation: MGRKAHFIMKEIATEYSFIKYTELELDDNGSIKQLSIPNKYNVIYAIAINDELVYIGKTKNLRKRINYYRTAINRKDKTSDSTKSALIHSALKEGSKVEFYARQCFNLSMTNELGTMTIATIDLEEPLFIKLFNPPWNIQHKKK
SIO_010081: T4p229
subclass of: SO_0000673
so part of: T4p229
location: complement(137517..137951)
location: region:137517-137951:-1
so has part: feature:137517-137951:-1:exon

NP_049840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137517-137951:-1:exon

T4p230
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdB
locus tag: T4p230
so part of: sequence
location: complement(137955..139719)
location: region:137955-139719:-1
so has part: feature:137955-139719:-1:exon
subclass of: SO_0000010

1258601
type: Gene
SIO_000068: ncbigene

position:137955:-1
position: 137955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139719:-1
position: 139719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137955-139719:-1:exon

T4p230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdB
locus tag: T4p230
codon start: 1
transl table: 11
product: ribonucleotide reductase class Ia beta subunit
translation: MSTVFNTNPVDVLNEPMFFGSGLGLARYDIQRHRVFEELIERQISFFWRPEEVNLMMDAAQFNKLPQYQQNIFTNNLKYQSLLDSIQGRAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMKRAESIGRYYDDVLVKTREWENAKDMVEYYKDQGLILADKDVEQRAKRDLMKSLYLCLHVINALEAIRFYVSFACTFNFHKNMEIMEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVELSSYLVAQIDNDVDDKVMMSFKKYF
SIO_010081: T4p230
subclass of: SO_0000673
so part of: T4p230
location: complement(join(137955..138457,139056..139719))
location: region:137955-139719:-1
so has part: feature:139056-139719:-1:exon
so has part: feature:137955-138457:-1:exon

NP_049841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139056-139719:-1:exon

position:139056:-1
position: 139056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137955-138457:-1:exon

position:138457:-1
position: 138457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

T4p230
type: Intron
subclass of: SO_0000188
RO_0002162: 2681598
gene: nrdB
locus tag: T4p230
note: group IA2 self-splicing intron; contains I-TevIII CDS (non-functional)
number: 1
SIO_010081: T4p230
subclass of: SO_0000673
so part of: T4p230
location: complement(138458..139055)
location: region:138458-139055:-1
so has part: feature:138458-139055:-1:exon

position:138458:-1
position: 138458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139055:-1
position: 139055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138458-139055:-1:exon

T4p231
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: I-TevIII
locus tag: T4p231
so part of: sequence
location: complement(138593..138886)
location: region:138593-138886:-1
so has part: feature:138593-138886:-1:exon
subclass of: SO_0000010

1258778
type: Gene
SIO_000068: ncbigene

position:138593:-1
position: 138593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138886:-1
position: 138886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138593-138886:-1:exon

T4p231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: I-TevIII
locus tag: T4p231
note: defective DNA endonuclease encoded by group 1A intron in nrdB, deletion in proximal half; H-N-H family; active I-TevIII homolog in T4-related phage RB3
codon start: 1
transl table: 11
product: endonuclease
translation: MLTDLYLKILMEEHKKRTSAKTLEMVKNGTHPAQKEITCDFCGHIGKGPGFYLKHNDRCKLNPNRIQLNCPYCDKKDLSPSTYKRWHGDNCKTRFND
SIO_010081: T4p231
subclass of: SO_0000673
so part of: T4p231
location: complement(138593..138886)
location: region:138593-138886:-1
so has part: feature:138593-138886:-1:exon

NP_049842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138593-138886:-1:exon

T4p232
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdB.1
locus tag: T4p232
so part of: sequence
location: complement(139716..139967)
location: region:139716-139967:-1
so has part: feature:139716-139967:-1:exon
subclass of: SO_0000010

1258813
type: Gene
SIO_000068: ncbigene

position:139716:-1
position: 139716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139967:-1
position: 139967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139716-139967:-1:exon

T4p232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdB.1
locus tag: T4p232
codon start: 1
transl table: 11
product: Nrd.1 hypothetical protein
translation: MRKPKTEEAKKNIAAAKVGVLNPMYGTISPTRDVPHTKETRDLISLRTKQGAEYPPCPHCGKKVNKGNALRWHYDKCKFKDSK
SIO_010081: T4p232
subclass of: SO_0000673
so part of: T4p232
location: complement(139716..139967)
location: region:139716-139967:-1
so has part: feature:139716-139967:-1:exon

NP_049843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139716-139967:-1:exon

T4p233
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: nrdB.2
gene: mobE
locus tag: T4p233
gene synonym: nrdB.2
so part of: sequence
location: complement(139991..140416)
location: region:139991-140416:-1
so has part: feature:139991-140416:-1:exon
subclass of: SO_0000010

1258736
type: Gene
SIO_000068: ncbigene

position:139991:-1
position: 139991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140416:-1
position: 140416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139991-140416:-1:exon

T4p233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: nrdB.2
gene: mobE
locus tag: T4p233
gene synonym: nrdB.2
note: DNA endonuclease; H-N-H family; relative of mobile endonucleases of filamentous fungi
codon start: 1
transl table: 11
product: homing endonuclease
translation: MNYQKIYNDLISRAQAREPLSEYKETHHIIPRCMGGSDDKENLVELTAREHFIAHAILSKIYPVKSVIFAFFMMCNMKGTKKRHYKVHSKIYAHAKKLNSQFRKGTVISEETRLKMSKSENRSAFNRRNQTQNIGGNQRKG
SIO_010081: T4p233
subclass of: SO_0000673
so part of: T4p233
location: complement(139991..140416)
location: region:139991-140416:-1
so has part: feature:139991-140416:-1:exon

NP_049844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139991-140416:-1:exon

T4p234
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdA
locus tag: T4p234
so part of: sequence
location: complement(140416..142680)
location: region:140416-142680:-1
so has part: feature:140416-142680:-1:exon
subclass of: SO_0000010

1258795
type: Gene
SIO_000068: ncbigene

position:142680:-1
position: 142680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140416-142680:-1:exon

T4p234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdA
locus tag: T4p234
note: NrdA; ribonucleoside-diphosphate reductase is comprised of NrdA and NrdB; provides nucleotide precursors necessary for DNA synthesis; catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
codon start: 1
transl table: 11
product: NrdA-like aerobic NDP reductase large subunit
translation: MQLINVIKSSGVSQSFDPQKIIKVLSWAAEGTSVDPYELYENIKSYLRDGMTTDDIQTIVIKAAANSISVEEPDYQYVAARCLMFALRKHVYGQYEPRSFIDHISYCVNAGKYDPELLSKYSAEEITFLESKIKHERDMEFTYSGAMQLKEKYLVKDKTTGQIYETPQFAFMTIGMALHQDEPVDRLKHVIRFYEAVSTRQISLPTPIMAGCRTPTRQFSSCVVIEAGDSLKSINKASASIVEYISKRAGIGINVGMIRAEGSKIGMGEVRHTGVIPFWKHFQTAVKSCSQGGIRGGAATAYYPIWHLEVENLLVLKNNKGVEENRIRHMDYGVQLNDLMMERFGKNDYITLFSPHEMGGELYYSYFKDQDRFRELYEAAEKDPNIRKKRIKARELFELLMTERSGTARIYVQFIDNTNNYTPFIREKAPIRQSNLCCEIAIPTNDVNSPDAEIGLCTLSAFVLDNFDWQDQDKINELAEVQVRALDNLLDYQGYPVPEAEKAKKRRNLGVGVTNYAAWLASNFASYEDANDLTHELFERLQYGLIKASIKLAKEKGPSEYYSDTRWSRGELPIDWYNKKIDQIAAPKYVCDWSALREDLKLFGIRNSTLSALMPCESSSQVSNSTNGYEPPRGPVSVKESKEGSFNQVVPNIEHNIDLYDYTWKLAKKGNKPYLTQVAIMLKWVCQSASANTYYDPQIFPKGKVPMSIMIDDMLYGWYYGIKNFYYHNTRDGSGTDDYEIETPKADDCAACKL
SIO_010081: T4p234
subclass of: SO_0000673
so part of: T4p234
location: complement(140416..142680)
location: region:140416-142680:-1
so has part: feature:140416-142680:-1:exon

NP_049845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140416-142680:-1:exon

T4p235
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdA.1
locus tag: T4p235
so part of: sequence
location: complement(142671..142997)
location: region:142671-142997:-1
so has part: feature:142671-142997:-1:exon
subclass of: SO_0000010

1258707
type: Gene
SIO_000068: ncbigene

position:142671:-1
position: 142671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142997:-1
position: 142997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142671-142997:-1:exon

T4p235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdA.1
locus tag: T4p235
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNYSSVGRLCRVVNKYKSDFDVNIHRGTFWGNYVGKDAGSREAAIELFKKDFIRRIKSGEITKAHLEPLRGMRLGCTCKPKPCHGDIIAHIVNRLFKDDFQVEDLCN
SIO_010081: T4p235
subclass of: SO_0000673
so part of: T4p235
location: complement(142671..142997)
location: region:142671-142997:-1
so has part: feature:142671-142997:-1:exon

NP_049846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142671-142997:-1:exon

T4p236
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: nrdA.2
locus tag: T4p236
so part of: sequence
location: complement(142951..143214)
location: region:142951-143214:-1
so has part: feature:142951-143214:-1:exon
subclass of: SO_0000010

1258679
type: Gene
SIO_000068: ncbigene

position:142951:-1
position: 142951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143214:-1
position: 143214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142951-143214:-1:exon

T4p236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: nrdA.2
locus tag: T4p236
codon start: 1
transl table: 11
product: NrdA.2 conserved hypothetical protein
translation: MILRFKDTSGVVLFTLPNPSELEVPGPEQPITIYGKKYYTHKMTREYFDNKISTVKTSSDCYYDITVLTEKQYDELFQRGPSMPGSE
SIO_010081: T4p236
subclass of: SO_0000673
so part of: T4p236
location: complement(142951..143214)
location: region:142951-143214:-1
so has part: feature:142951-143214:-1:exon

NP_049847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142951-143214:-1:exon

T4p237
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: td
locus tag: T4p237
so part of: sequence
location: complement(143235..145112)
location: region:143235-145112:-1
so has part: feature:143235-145112:-1:exon
subclass of: SO_0000010

1258770
type: Gene
SIO_000068: ncbigene

position:143235:-1
position: 143235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145112:-1
position: 145112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143235-145112:-1:exon

T4p237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: td
locus tag: T4p237
codon start: 1
transl table: 11
product: thymidylate synthase
translation: MKQYQDLIKDIFENGYETDDRTGTGTIALFGSKLRWDLTKGFPAVTTKKLAWKACIAELIWFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDFGGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQRSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPKELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV
SIO_010081: T4p237
subclass of: SO_0000673
so part of: T4p237
location: complement(join(143235..143546,144564..145112))
location: region:143235-145112:-1
so has part: feature:144564-145112:-1:exon
so has part: feature:143235-143546:-1:exon

NP_049848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144564-145112:-1:exon

position:144564:-1
position: 144564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143235-143546:-1:exon

position:143546:-1
position: 143546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

T4p237
type: Intron
subclass of: SO_0000188
RO_0002162: 2681598
gene: td
locus tag: T4p237
note: group IA2 self-splicing intron; contains I-TevI CDS
number: 1
SIO_010081: T4p237
subclass of: SO_0000673
so part of: T4p237
location: complement(143547..144563)
location: region:143547-144563:-1
so has part: feature:143547-144563:-1:exon

position:143547:-1
position: 143547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144563:-1
position: 144563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143547-144563:-1:exon

T4p238
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: I-TevI
locus tag: T4p238
so part of: sequence
location: complement(143694..144431)
location: region:143694-144431:-1
so has part: feature:143694-144431:-1:exon
subclass of: SO_0000010

1258722
type: Gene
SIO_000068: ncbigene

position:143694:-1
position: 143694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144431:-1
position: 144431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143694-144431:-1:exon

T4p238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: I-TevI
locus tag: T4p238
note: DNA endonuclease encoded by group 1A intron in td; GIY-YIG family
codon start: 1
transl table: 11
product: homing endonuclease
translation: MKSGIYQIKNTLNNKVYVGSAKDFEKRWKRHFKDLEKGCHSSIKLQRSFNKHGNVFECSILEEIPYEKDLIIERENFWIKELNSKINGYNIADATFGDTCSTHPLKEEIIKKRSETVKAKMLKLGPDGRKALYSKPGSKNGRWNPETHKFCKCGVRIQTSAYTCSKCRNRSGENNSFFNHKHSDITKSKISEKMKGKKPSNIKKISCDGVIFDCAADAARHFKISSGLVTYRVKSDKWNWFYINA
SIO_010081: T4p238
subclass of: SO_0000673
so part of: T4p238
location: complement(143694..144431)
location: region:143694-144431:-1
so has part: feature:143694-144431:-1:exon

NP_049849.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143694-144431:-1:exon

T4p239
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: frd
locus tag: T4p239
so part of: sequence
location: complement(145109..145690)
location: region:145109-145690:-1
so has part: feature:145109-145690:-1:exon
subclass of: SO_0000010

1258671
type: Gene
SIO_000068: ncbigene

position:145109:-1
position: 145109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145690:-1
position: 145690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145109-145690:-1:exon

T4p239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: frd
locus tag: T4p239
note: product is methyl donor used by dTMP synthase
codon start: 1
transl table: 11
product: dihydrofolate reductase
translation: MIKLVFRYSPTKTVDGFNELAFGLGDGLPWGRVKKDLQNFKARTEGTIMIMGAKTFQSLPTLLPGRSHIVVCDLARDYPVTKDGDLAHFYITWEQYITYISGGEIQVSSPNAPFETMLDQNSKVSVIGGPALLYAALPYADEVVVSRIVKRHRVNSTVQLDASFLDDISKREMVETHWYKIDEVTTLTESVYK
SIO_010081: T4p239
subclass of: SO_0000673
so part of: T4p239
location: complement(145109..145690)
location: region:145109-145690:-1
so has part: feature:145109-145690:-1:exon

NP_049850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145109-145690:-1:exon

T4p240
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: frd.1
locus tag: T4p240
so part of: sequence
location: complement(145762..146004)
location: region:145762-146004:-1
so has part: feature:145762-146004:-1:exon
subclass of: SO_0000010

1258741
type: Gene
SIO_000068: ncbigene

position:145762:-1
position: 145762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146004:-1
position: 146004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145762-146004:-1:exon

T4p240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: frd.1
locus tag: T4p240
codon start: 1
transl table: 11
product: DUF5417 domain-containing protein
translation: MRLQRQSIKDSEVRGKWYFNIIGKDSELVEKAEHLLRDMGWEDECDGCPLYEDGESAGFWIYHSDVEQFKADWKIVKKSV
SIO_010081: T4p240
subclass of: SO_0000673
so part of: T4p240
location: complement(145762..146004)
location: region:145762-146004:-1
so has part: feature:145762-146004:-1:exon

NP_049851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145762-146004:-1:exon

T4p241
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: frd.2
locus tag: T4p241
so part of: sequence
location: complement(146143..146529)
location: region:146143-146529:-1
so has part: feature:146143-146529:-1:exon
subclass of: SO_0000010

1258627
type: Gene
SIO_000068: ncbigene

position:146143:-1
position: 146143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146529:-1
position: 146529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146143-146529:-1:exon

T4p241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: frd.2
locus tag: T4p241
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIGKKYELNPHRIKSFIDISSSNASMVGIIQENGGWFEVKSISSLDGFDYVTEIICANGEIYNDDGMGDDYFELSEEEFYCFREYKEPTSEEDEVKDKVSGVTKIHCIVDENNVDEIIELLRKTFKK
SIO_010081: T4p241
subclass of: SO_0000673
so part of: T4p241
location: complement(146143..146529)
location: region:146143-146529:-1
so has part: feature:146143-146529:-1:exon

NP_049852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146143-146529:-1:exon

T4p242
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: frd.3
locus tag: T4p242
so part of: sequence
location: complement(146575..146802)
location: region:146575-146802:-1
so has part: feature:146575-146802:-1:exon
subclass of: SO_0000010

1258615
type: Gene
SIO_000068: ncbigene

position:146575:-1
position: 146575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146802:-1
position: 146802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146575-146802:-1:exon

T4p242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: frd.3
locus tag: T4p242
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKVDIDIVDFEYIEEIIRNRYPELSITSVQDSKFWSIQIVIEGPLEDLTRFMANEYCDGMDSEDAEFYMGLIEQ
SIO_010081: T4p242
subclass of: SO_0000673
so part of: T4p242
location: complement(146575..146802)
location: region:146575-146802:-1
so has part: feature:146575-146802:-1:exon

NP_049853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146575-146802:-1:exon

T4p243
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 32
locus tag: T4p243
so part of: sequence
location: complement(146948..147853)
location: region:146948-147853:-1
so has part: feature:146948-147853:-1:exon
subclass of: SO_0000010

1258602
type: Gene
SIO_000068: ncbigene

position:146948:-1
position: 146948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147853:-1
position: 147853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146948-147853:-1:exon

T4p243
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 32
locus tag: T4p243
note: DNA replication, recombination and repair protein, helix-destabilizing; gp32; binds single-stranded DNA and destabilizes double-stranded DNA; involved in DNA replication, repair, and recombination; interacts with several replication proteins; stimulates replisome processivity and accuracy
codon start: 1
transl table: 11
product: single strand DNA binding protein
translation: MFKRKSTAELAAQMAKLNGNKGFSSEDKGEWKLKLDNAGNGQAVIRFLPSKNDEQAPFAILVNHGFKKNGKWYIETCSSTHGDYDSCPVCQYISKNDLYNTDNKEYSLVKRKTSYWANILVVKDPAAPENEGKVFKYRFGKKIWDKINAMIAVDVEMGETPVDVTCPWEGANFVLKVKQVSGFSNYDESKFLNQSAIPNIDDESFQKELFEQMVDLSEMTSKDKFKSFEELNTKFGQVMGTAVMGGAAATAAKKADKVADDLDAFNVDDFNTKTEDDFMSSSSGSSSSADDTDLDDLLNDL
SIO_010081: T4p243
subclass of: SO_0000673
so part of: T4p243
location: complement(146948..147853)
location: region:146948-147853:-1
so has part: feature:146948-147853:-1:exon

NP_049854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146948-147853:-1:exon

T4p244
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: 32.1
gene: SegG
locus tag: T4p244
gene synonym: 32.1
so part of: sequence
location: complement(147909..148541)
location: region:147909-148541:-1
so has part: feature:147909-148541:-1:exon
subclass of: SO_0000010

1258646
type: Gene
SIO_000068: ncbigene

position:147909:-1
position: 147909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148541:-1
position: 148541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147909-148541:-1:exon

T4p244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: 32.1
gene: SegG
locus tag: T4p244
gene synonym: 32.1
note: site-specific DNA endonuclease; GIY-YIG family
codon start: 1
transl table: 11
product: homing endonuclease
translation: MNIVYWFTFEDRVKNKTPPYYYIGSKLNCSFENGIIYDSSGKEYWSSCKQKRFLNALMLQKPSVKIIQIDDDLDVIEAERKYQLEVNARDNPDYFNLVYAGGGFGVSGETHPAKDPEVREHMRLANYMNRDDFRPWKTSRANIESWKLSHIAYENYVLLLSSNLYGKTPGWRRVKGNINITDTTAKSMVKYFNSGWIPLEDPEYCELCQL
SIO_010081: T4p244
subclass of: SO_0000673
so part of: T4p244
location: complement(147909..148541)
location: region:147909-148541:-1
so has part: feature:147909-148541:-1:exon

NP_049855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147909-148541:-1:exon

T4p245
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 59
locus tag: T4p245
so part of: sequence
location: complement(148543..149196)
location: region:148543-149196:-1
so has part: feature:148543-149196:-1:exon
subclass of: SO_0000010

1258623
type: Gene
SIO_000068: ncbigene

position:148543:-1
position: 148543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149196:-1
position: 149196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148543-149196:-1:exon

T4p245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 59
locus tag: T4p245
note: DNA replication and recombination protein for loading gp41 on ssDNA with gp31 and UvsX; gp59; 41 helicase loading protein; DNA binding protein with affinity for forked DNA and single-stranded DNA; contains HMG-like structural region; facillitates loading of 41 helicase onto DNA; provides gatekeeper function during replisome assembly; interacts with 32 single-stranded DNA binding protein; involved in origin-mediated viral replication; necessary for viral recombination-mediated replication
codon start: 1
transl table: 11
product: DNA helicase loader
translation: MIKLRMPAGGERYIDGKSVYKLYLMIKQHMNGKYDVIKYNWCMRVSDAAYQKRRDKYFFQKLSEKYKLKELALIFISNLVANQDAWIGDISDADALVFYREYIGRLKQIKFKFEEDIRNIYYFSKKVEVSAFKEIFEYNPKVQSSYIFKLLQSNIISFETFILLDSFLNIIDKHDEQTDNLVWNNYSIKLKAYRKILNIDSQKAKNVFIETVKSCKY
SIO_010081: T4p245
subclass of: SO_0000673
so part of: T4p245
location: complement(148543..149196)
location: region:148543-149196:-1
so has part: feature:148543-149196:-1:exon

NP_049856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148543-149196:-1:exon

T4p246
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 33
locus tag: T4p246
so part of: sequence
location: complement(149193..149531)
location: region:149193-149531:-1
so has part: feature:149193-149531:-1:exon
subclass of: SO_0000010

1258793
type: Gene
SIO_000068: ncbigene

position:149193:-1
position: 149193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149531:-1
position: 149531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149193-149531:-1:exon

T4p246
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 33
locus tag: T4p246
note: connector protein between gp45 of replisome and gp55 late sigma factor
codon start: 1
transl table: 11
product: late promoter transcriptional regulator
translation: MTQFSLNDIRPVDETGLSEKELSIKKEKDEIAKLLDRQENGFIIEKMVEEFGMSYLEATTAFLEENSIPETQFAKFIPSGIIEKIQSEAIDENLLRPSVVRCEKTNTLDFLL
SIO_010081: T4p246
subclass of: SO_0000673
so part of: T4p246
location: complement(149193..149531)
location: region:149193-149531:-1
so has part: feature:149193-149531:-1:exon

NP_049857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149193-149531:-1:exon

T4p247
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: dsbA
locus tag: T4p247
so part of: sequence
location: complement(149509..149778)
location: region:149509-149778:-1
so has part: feature:149509-149778:-1:exon
subclass of: SO_0000010

1258620
type: Gene
SIO_000068: ncbigene

position:149509:-1
position: 149509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149778:-1
position: 149778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149509-149778:-1:exon

T4p247
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: dsbA
locus tag: T4p247
note: facilitates transcription from some late promoters; DsbA; binds to dsDNA; DsbA is thought to enhance bacteriophage T4 transcription from some late promoters, although it is not essential
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MAKKEMVEFDEAIHGEDLAKFIKEASDHKLKISGYNELIKDIRIRAKDELGVDGKMFNRLLALYHKDNRDVFEAETEEVVELYDTVFSK
SIO_010081: T4p247
subclass of: SO_0000673
so part of: T4p247
location: complement(149509..149778)
location: region:149509-149778:-1
so has part: feature:149509-149778:-1:exon

NP_049858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149509-149778:-1:exon

T4p248
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: das
gene: rnh
locus tag: T4p248
gene synonym: das
so part of: sequence
location: complement(149787..150704)
location: region:149787-150704:-1
so has part: feature:149787-150704:-1:exon
subclass of: SO_0000010

1258577
type: Gene
SIO_000068: ncbigene

position:149787:-1
position: 149787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150704:-1
position: 150704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149787-150704:-1:exon

T4p248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: das
gene: rnh
locus tag: T4p248
gene synonym: das
note: DNA replication enzyme for processing of Okazaki fragment RNA primers; das; protein 33.2; 5' to 3' exonuclease; degrades DNA/DNA and RNA/DNA; removes RNA primers and some adjacent DNA from lagging strand fragments during DNA replication prior to ligation of fragments; structural functional homolgy to FEN1 nuclease familly
codon start: 1
transl table: 11
product: RnaseH
translation: MDLEMMLDEDYKEGICLIDFSQIALSTALVNFPDKEKINLSMVRHLILNSIKFNVKKAKTLGYTKIVLCIDNAKSGYWRRDFAYYYKKNRGKAREESTWDWEGYFESSHKVIDELKAYMPYIVMDIDKYEADDHIAVLVKKFSLEGHKILIISSDGDFTQLHKYPNVKQWSPMHKKWVKIKSGSAEIDCMTKILKGDKKDNVASVKVRSDFWFTRVEGERTPSMKTSIVEAIANDREQAKVLLTESEYNRYKENLVLIDFDYIPDNIASNIVNYYNSYKLPPRGKIYSYFVKAGLSKLTNSINEF
SIO_010081: T4p248
subclass of: SO_0000673
so part of: T4p248
location: complement(149787..150704)
location: region:149787-150704:-1
so has part: feature:149787-150704:-1:exon

NP_049859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149787-150704:-1:exon

T4p249
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 34
locus tag: T4p249
so part of: sequence
location: 150809..154678
location: region:150809-154678:1
so has part: feature:150809-154678:1:exon
subclass of: SO_0000010

1258754
type: Gene
SIO_000068: ncbigene

position:150809:1
position: 150809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154678:1
position: 154678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150809-154678:1:exon

T4p249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 34
locus tag: T4p249
note: gp34; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; long tail fibers radiate from the base plate; the long tail fibers are comprised of gp34 and gp37
codon start: 1
transl table: 11
product: tail fiber protein proximal subunit
translation: MAEIKREFRAEDGLDAGGDKIINVALADRTVGTDGVNVDYLIQENTVQQYDPTRGYLKDFVIIYDNRFWAAINDIPKPAGAFNSGRWRALRTDANWITVSSGSYQLKSGEAISVNTAAGNDITFTLPSSPIDGDTIVLQDIGGKPGVNQVLIVAPVQSIVNFRGEQVRSVLMTHPKSQLVLIFSNRLWQMYVADYSREAIVVTPANTYQAQSNDFIVRRFTSAAPINVKLPRFANHGDIINFVDLDKLNPLYHTIVTTYDETTSVQEVGTHSIEGRTSIDGFLMFDDNEKLWRLFDGDSKARLRIITTNSNIRPNEEVMVFGANNGTTQTIELKLPTNISVGDTVKISMNYMRKGQTVKIKAADEDKIASSVQLLQFPKRSEYPPEAEWVTVQELVFNDETNYVPVLELAYIEDSDGKYWVVQQNVPTVERVDSLNDSTRARLGVIALATQAQANVDLENSPQKELAITPETLANRTATETRRGIARIATTAQVNQNTTFSFADDIIITPKKLNERTATETRRGVAEIATQQETNAGTDDTTIITPKKLQARQGSESLSGIVTFVSTAGATPASSRELNGTNVYNKNTDNLVVSPKALDQYKATPTQQGAVILAVESEVIAGQSQQGWANAVVTPETLHKKTSTDGRIGLIEIATQSEVNTGTDYTRAVTPKTLNDRRATESLSGIAEIATQVEFDAGVDDTRISTPLKIKTRFNSTDRTSVVALSGLVESGTLWDHYTLNILEANETQRGTLRVATQVEAAAGTLDNVLITPKKLLGTKSTEAQEGVIKVATQSETVTGTSANTAVSPKNLKWIAQSEPTWAATTAIRGFVKTSSGSITFVGNDTVGSTQDLELYEKNSYAVSPYELNRVLANYLPLKAKAADTNLLDGLDSSQFIRRDIAQTVNGSLTLTQQTNLSAPLVSSSTGEFGGSLAANRTFTIRNTGAPTSIVFEKGPASGANPAQSMSIRVWGNQFGGGSDTTRSTVFEVGDDTSHHFYSQRNKDGNIAFNINGTVMPININASGLMNVNGTATFGRSVTANGEFISKSANAFRAINGDYGFFIRNDASNTYFLLTAAGDQTGGFNGLRPLLINNQSGQITIGEGLIIAKGVTINSGGLTVNSRIRSQGTKTSDLYTRAPTSDTVGFWSIDINDSATYNQFPGYFKMVEKTNEVTGLPYLERGEEVKSPGTLTQFGNTLDSLYQDWITYPTTPEARTTRWTRTWQKTKNSWSSFVQVFDGGNPPQPSDIGALPSDNATMGNLTIRDFLRIGNVRIVPDPVNKTVKFEWVE
SIO_010081: T4p249
subclass of: SO_0000673
so part of: T4p249
location: 150809..154678
location: region:150809-154678:1
so has part: feature:150809-154678:1:exon

NP_049860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150809-154678:1:exon

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 2681598
note: DNA replication origin oriG (ori34); (-) strand direction; primer RNA is opposite direction of adjacent gene 34 transcript; origin placed at 50 bases from start of middle transcript from promoter Pm153011
so part of: sequence
location: 152947
location: region:152947-152947:1
so has part: feature:152947-152947:1:region

position:152947:1
position: 152947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152947-152947:1:region

T4p250
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 35
locus tag: T4p250
so part of: sequence
location: 154687..155805
location: region:154687-155805:1
so has part: feature:154687-155805:1:exon
subclass of: SO_0000010

1258683
type: Gene
SIO_000068: ncbigene

position:154687:1
position: 154687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155805:1
position: 155805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154687-155805:1:exon

T4p250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 35
locus tag: T4p250
codon start: 1
transl table: 11
product: long tail fiber protein proximal connector
translation: MEKFMAEFGQGYVQTPFLSESNSVRYKISIAGSCPLSTAGPSYVKFQDNPVGSQTFSAGLHLRVFDPSTGALVDSKSYAFSTSNDTTSAAFVSFMNSLTNNRIVAILTSGKVNFPPEVVSWLRTAGTSAFPSDSILSRFDVSYAAFYTSSKRAIALEHVKLSNRKSTDDYQTILDVVFDSLEDVGATGFPRGTYESVEQFMSAVGGTNDEIARLPTSAAISKLSDYNLIPGDVLYLKAQLYADADLLALGTTNISIRFYNASNGYISSTQAEFTGQAGSWELKEDYVVVPENAVGFTIYAQRTAQAGQGGMRNLSFSEVSRNGGISKPAEFGVNGIRVNYICESASPPDIMVLPTQASSKTGKVFGQEFREV
SIO_010081: T4p250
subclass of: SO_0000673
so part of: T4p250
location: 154687..155805
location: region:154687-155805:1
so has part: feature:154687-155805:1:exon

NP_049861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154687-155805:1:exon

T4p251
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 36
locus tag: T4p251
so part of: sequence
location: 155868..156533
location: region:155868-156533:1
so has part: feature:155868-156533:1:exon
subclass of: SO_0000010

1258790
type: Gene
SIO_000068: ncbigene

position:155868:1
position: 155868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156533:1
position: 156533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155868-156533:1:exon

T4p251
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 36
locus tag: T4p251
codon start: 1
transl table: 11
product: hinge connector of long tail fiber protein distal connector
translation: MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTYASKVTFNAGIQVPYAPNIMSPCGIYGGNGDGATFDKANIDIVSWYGVGFKSSFGSTGRTVVINTRNGDINTKGVVSAAGQVRSGAAAPIAANDLTRKDYVDGAINTVTANANSRVLRSGDTMTGNLTAPNFFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
SIO_010081: T4p251
subclass of: SO_0000673
so part of: T4p251
location: 155868..156533
location: region:155868-156533:1
so has part: feature:155868-156533:1:exon

NP_049862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155868-156533:1:exon

T4p252
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 37
locus tag: T4p252
so part of: sequence
location: 156542..159622
location: region:156542-159622:1
so has part: feature:156542-159622:1:exon
subclass of: SO_0000010

1258629
type: Gene
SIO_000068: ncbigene

position:156542:1
position: 156542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159622:1
position: 159622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156542-159622:1:exon

T4p252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 37
locus tag: T4p252
codon start: 1
transl table: 11
product: long tail fiber protein distal subunit
translation: MATLKQIQFKRSKIAGTRPAASVLAEGELAINLKDRTIFTKDDSGNIIDLGFAKGGQVDGNVTINGLLRLNGDYVQTGGMTVNGPIGSTDGVTGKIFRSTQGSFYARATNDTSNAHLWFENADGTERGVIYARPQTTTDGEIRLRVRQGTGSTANSEFYFRSINGGEFQANRILASDSLVTKRIAVDTVIHDAKAFGQYDSHSLVNYVYPGTGETNGVNYLRKVRAKSGGTIYHEIVTAQTGLADEVSWWSGDTPVFKLYGIRDDGRMIIRNSLALGTFTTNFPSSDYGNVGVMGDKYLVLGDTVTGLSYKKTGVFDLVGGGYSVASITPDSFRSTRKGIFGRSEDQGATWIMPGTNAALLSVQTQADNNNAGDGQTHIGYNAGGKMNHYFRGTGQMNINTQQGMEINPGILKLVTGSNNVQFYADGTISSIQPIKLDNEIFLTKSNNTAGLKFGAPSQVDGTRTIQWNGGTREGQNKNYVIIKAWGNSFNATGDRSRETVFQVSDSQGYYFYAHRKAPTGDETIGRIEAQFAGDVYAKGIIANGNFRVVGSSALAGNVTMSNGLFVQGGSSITGQVKIGGTANALRIWNAEYGAIFRRSESNFYIIPTNQNEGESGDIHSSLRPVRIGLNDGMVGLGRDSFIVDQNNALTTINSNSRINANFRMQLGQSAYIDAECTDAVRPAGAGSFASQNNEDVRAPFYMNIDRTDASAYVPILKQRYVQGNGCYSLGTLINNGNFRVHYHGGGDNGSTGPQTADFGWEFIKNGDFISPRDLIAGKVRFDRTGNITGGSGNFANLNSTIESLKTDIMSSYPIGAPIPWPSDSVPAGFALMEGQTFDKSAYPKLAVAYPSGVIPDMRGQTIKGKPSGRAVLSAEADGVKAHSHSASASSTDLGTKTTSSFDYGTKGTNSTGGHTHSGSGSTSTNGEHSHYIEAWNGTGVGGNKMSSYAISYRAGGSNTNAAGNHSHTFSFGTSSAGDHSHSVGIGAHTHTVAIGSHGHTITVNSTGNTENTVKNIAFNYIVRLA
SIO_010081: T4p252
subclass of: SO_0000673
so part of: T4p252
location: 156542..159622
location: region:156542-159622:1
so has part: feature:156542-159622:1:exon

NP_049863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156542-159622:1:exon

T4p253
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 38
locus tag: T4p253
so part of: sequence
location: 159649..160200
location: region:159649-160200:1
so has part: feature:159649-160200:1:exon
subclass of: SO_0000010

1258706
type: Gene
SIO_000068: ncbigene

position:159649:1
position: 159649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160200:1
position: 160200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159649-160200:1:exon

T4p253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 38
locus tag: T4p253
note: gp38 plays this role for the T4 subfamily of phages; for the T2 subfamily, the unrelated 'gp38' is the adhesion, binding to the distal end of the long tail fiber
codon start: 1
transl table: 11
product: tail fiber assembly
translation: MKIYHYYFDTKEFYKEENYKPVKGLGLPAHSTIKKPLEPKEGYAVVFDERTQDWIYEEDHRGKRAWTFNKEEIFISDIGSPVGITFDEPGEFDIWTDDGWKEDETYKRVLIRNRKIEELYKEFQVLNNMIEASVANKKEKFYYKNLKRFFALLEKHEHLGGEFPSWPEKEQKPWYKRLFKHYV
SIO_010081: T4p253
subclass of: SO_0000673
so part of: T4p253
location: 159649..160200
location: region:159649-160200:1
so has part: feature:159649-160200:1:exon

NP_049864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159649-160200:1:exon

T4p254
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: rV
alternative label: stII
gene: t
locus tag: T4p254
gene synonym: rV; stII
so part of: sequence
location: 160221..160877
location: region:160221-160877:1
so has part: feature:160221-160877:1:exon
subclass of: SO_0000010

1258610
type: Gene
SIO_000068: ncbigene

position:160221:1
position: 160221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160877:1
position: 160877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160221-160877:1:exon

T4p254
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: rV
alternative label: stII
gene: t
locus tag: T4p254
gene synonym: rV; stII
note: pore protein for T4 e lysozyme, controlling lysis timing and lysis inhibition, functions with rI protein
codon start: 1
transl table: 11
product: holin
translation: MAAPRISFSPSDILFGVLDRLFKDNATGKVLASRVAVVILLFIMAIVWYRGDSFFEYYKQSKYETYSEIIEKERTARFESVALEQLQIVHISSEADFSAVYSFRPKNLNYFVDIIAYEGKLPSTISEKSLGGYPVDKTMDEYTVHLNGRHYYSNSKFAFLPTKKPTPEINYMYSCPYFNLDNIYAGTITMYWYRNDHISNDRLESICAQAARILGRAK
SIO_010081: T4p254
subclass of: SO_0000673
so part of: T4p254
location: 160221..160877
location: region:160221-160877:1
so has part: feature:160221-160877:1:exon

NP_049865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160221-160877:1:exon

T4p255
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: asiA
locus tag: T4p255
so part of: sequence
location: complement(160878..161150)
location: region:160878-161150:-1
so has part: feature:160878-161150:-1:exon
subclass of: SO_0000010

1258709
type: Gene
SIO_000068: ncbigene

position:160878:-1
position: 160878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161150:-1
position: 161150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160878-161150:-1:exon

T4p255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: asiA
locus tag: T4p255
note: binds RNAP sigma 70 subunit, used together with MotA for activation of T4 middle promoters
codon start: 1
transl table: 11
product: anti-sigma factor
translation: MNKNIDTVREIITVASILIKFSREDIVENRANFIAFLNEIGVTHEGRKLNQNSFRKIVSELTQEDKKTLIDEFNEGFEGVYRYLEMYTNK
SIO_010081: T4p255
subclass of: SO_0000673
so part of: T4p255
location: complement(160878..161150)
location: region:160878-161150:-1
so has part: feature:160878-161150:-1:exon

NP_049866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160878-161150:-1:exon

T4p256
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: asiA.1
locus tag: T4p256
so part of: sequence
location: complement(161163..161315)
location: region:161163-161315:-1
so has part: feature:161163-161315:-1:exon
subclass of: SO_0000010

1258666
type: Gene
SIO_000068: ncbigene

position:161163:-1
position: 161163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161315:-1
position: 161315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161163-161315:-1:exon

T4p256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: asiA.1
locus tag: T4p256
codon start: 1
transl table: 11
product: AsiA.1 hypothetical protein
translation: MSHNLEKVIEHNVAQERESFKEFVEKIFEENYTDQFTNQASDDIITKSTN
SIO_010081: T4p256
subclass of: SO_0000673
so part of: T4p256
location: complement(161163..161315)
location: region:161163-161315:-1
so has part: feature:161163-161315:-1:exon

NP_049867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161163-161315:-1:exon

T4p257
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: asiA.1
gene: arn
locus tag: T4p257
gene synonym: asiA.1
so part of: sequence
location: complement(161312..161590)
location: region:161312-161590:-1
so has part: feature:161312-161590:-1:exon
subclass of: SO_0000010

1258794
type: Gene
SIO_000068: ncbigene

position:161312:-1
position: 161312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161590:-1
position: 161590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161312-161590:-1:exon

T4p257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: asiA.1
gene: arn
locus tag: T4p257
gene synonym: asiA.1
note: anti-restriction nuclease, inhibits Rgl (MrcBC) nuclease that degrades non-glucosylated HMdC DNA
codon start: 1
transl table: 11
product: inhibitor of MrcBC restriction
translation: MIIDSQSVVQYTFKIDILEKLYKFLPNLYHSIVNELVEELHLENNDFLIGTYKDLSKAGYFYVIPAPGKNIDDVLKTIMIYVHDYEIEDYFE
SIO_010081: T4p257
subclass of: SO_0000673
so part of: T4p257
location: complement(161312..161590)
location: region:161312-161590:-1
so has part: feature:161312-161590:-1:exon

NP_049868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161312-161590:-1:exon

T4p258
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: asiA.2
alternative label: motA.-5
gene: arn.1
locus tag: T4p258
gene synonym: asiA.2; motA.-5
so part of: sequence
location: complement(161674..161805)
location: region:161674-161805:-1
so has part: feature:161674-161805:-1:exon
subclass of: SO_0000010

1258791
type: Gene
SIO_000068: ncbigene

position:161674:-1
position: 161674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161805:-1
position: 161805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161674-161805:-1:exon

T4p258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: asiA.2
alternative label: motA.-5
gene: arn.1
locus tag: T4p258
gene synonym: asiA.2; motA.-5
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYTDTRDLREHIFECGVAKKFSFTCKCLREVIQHYEQFSRKA
SIO_010081: T4p258
subclass of: SO_0000673
so part of: T4p258
location: complement(161674..161805)
location: region:161674-161805:-1
so has part: feature:161674-161805:-1:exon

NP_049869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161674-161805:-1:exon

T4p259
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: asiA.3
alternative label: motA.-4
gene: arn.2
locus tag: T4p259
gene synonym: asiA.3; motA.-4
so part of: sequence
location: complement(161876..162172)
location: region:161876-162172:-1
so has part: feature:161876-162172:-1:exon
subclass of: SO_0000010

1258792
type: Gene
SIO_000068: ncbigene

position:161876:-1
position: 161876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162172:-1
position: 162172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161876-162172:-1:exon

T4p259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: asiA.3
alternative label: motA.-4
gene: arn.2
locus tag: T4p259
gene synonym: asiA.3; motA.-4
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIKKFQIDGIMNQIQALEYANKMMSTNWGIYTNEPGFQFCDMEFTKKLVGKDYVCPFSSPVNGMLKPALRDLYIAMNEEMIKELKRQLKVIQFGQGN
SIO_010081: T4p259
subclass of: SO_0000673
so part of: T4p259
location: complement(161876..162172)
location: region:161876-162172:-1
so has part: feature:161876-162172:-1:exon

NP_049870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161876-162172:-1:exon

T4p260
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: asiA.4 + asiA.5
alternative label: motA.-2
alternative label: motA.-3
gene: arn.3
locus tag: T4p260
gene synonym: asiA.4 + asiA.5; motA.-2; motA.-3
so part of: sequence
location: complement(162172..162630)
location: region:162172-162630:-1
so has part: feature:162172-162630:-1:exon
subclass of: SO_0000010

1258674
type: Gene
SIO_000068: ncbigene

position:162630:-1
position: 162630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162172-162630:-1:exon

T4p260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: asiA.4 + asiA.5
alternative label: motA.-2
alternative label: motA.-3
gene: arn.3
locus tag: T4p260
gene synonym: asiA.4 + asiA.5; motA.-2; motA.-3
codon start: 1
transl table: 11
product: Arn.3 conserved hypothetical protein
translation: MNPFINRLKMLNVPLSRETPESLVEKFKAHGYKCTEEDILKEVPEICWQTAYWDENQKYQRRIVCAANRFKLKDGRTLIIPGARHYSKDMAEVLDVVKPQLVTQQVCDDDQGFIDQYSNYWTREEAMIIATYAGQVSIERGSEKELYSEDLY
SIO_010081: T4p260
subclass of: SO_0000673
so part of: T4p260
location: complement(162172..162630)
location: region:162172-162630:-1
so has part: feature:162172-162630:-1:exon

NP_049871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162172-162630:-1:exon

T4p261
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: asiA.6 + asiA.7
alternative label: motA.-1
gene: arn.4
locus tag: T4p261
gene synonym: asiA.6 + asiA.7; motA.-1
note: 162830
so part of: sequence
location: complement(162627..162833)
location: region:162627-162833:-1
so has part: feature:162627-162833:-1:exon
subclass of: SO_0000010

1258699
type: Gene
SIO_000068: ncbigene

position:162627:-1
position: 162627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162833:-1
position: 162833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162627-162833:-1:exon

T4p261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: asiA.6 + asiA.7
alternative label: motA.-1
gene: arn.4
locus tag: T4p261
gene synonym: asiA.6 + asiA.7; motA.-1
codon start: 1
transl table: 11
product: Arn.4 conserved hypothetical protein
translation: MIIRESKDAPVGIRNNFMAAISSFTDAAYEIYLADYKEFQESQPVIRSIGVNKAQQKTLWQRIKGWFK
SIO_010081: T4p261
subclass of: SO_0000673
so part of: T4p261
location: complement(162627..162833)
location: region:162627-162833:-1
so has part: feature:162627-162833:-1:exon

NP_049872.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162627-162833:-1:exon

T4p262
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: sip
gene: motA
locus tag: T4p262
gene synonym: sip
so part of: sequence
location: complement(162967..163602)
location: region:162967-163602:-1
so has part: feature:162967-163602:-1:exon
subclass of: SO_0000010

1258740
type: Gene
SIO_000068: ncbigene

position:162967:-1
position: 162967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163602:-1
position: 163602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162967-163602:-1:exon

T4p262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: sip
gene: motA
locus tag: T4p262
gene synonym: sip
note: binds Mot boxes at T4 middle promoters, activates transcription, acts with AsiA
codon start: 1
transl table: 11
product: MotA-like activator of middle period transcription
translation: MSKVTYIIKASNDVLNEKTATILITIAKKDFITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLIITGEAQDIISNAATLYAQENAPELLKKRATRKAREITSDMEEDKDLMLKLLDKNGFVLKKVEIYRSNYLAILEKRTNGIRNFEINNNGNMRIFGYKMMEHHIQKFTDIGMSCKIAKNGNVYLDIKRSAENIEAVITVASEL
SIO_010081: T4p262
subclass of: SO_0000673
so part of: T4p262
location: complement(162967..163602)
location: region:162967-163602:-1
so has part: feature:162967-163602:-1:exon

NP_049873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162967-163602:-1:exon

T4p263
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: motA.1
locus tag: T4p263
so part of: sequence
location: complement(163730..163879)
location: region:163730-163879:-1
so has part: feature:163730-163879:-1:exon
subclass of: SO_0000010

1258724
type: Gene
SIO_000068: ncbigene

position:163730:-1
position: 163730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163879:-1
position: 163879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163730-163879:-1:exon

T4p263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: motA.1
locus tag: T4p263
codon start: 1
transl table: 11
product: MotA.1 hypothetical predicted periplasmic protein
translation: MSPFIGITSAALVSGSILLAGLGVVPAVAGGLLAFGIQRVIMTVITVMQ
SIO_010081: T4p263
subclass of: SO_0000673
so part of: T4p263
location: complement(163730..163879)
location: region:163730-163879:-1
so has part: feature:163730-163879:-1:exon

NP_049874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163730-163879:-1:exon

T4p264
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 52
locus tag: T4p264
so part of: sequence
location: complement(163876..165204)
location: region:163876-165204:-1
so has part: feature:163876-165204:-1:exon
subclass of: SO_0000010

1258768
type: Gene
SIO_000068: ncbigene

position:163876:-1
position: 163876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165204:-1
position: 165204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163876-165204:-1:exon

T4p264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 52
locus tag: T4p264
note: gp52; bacteriophage T4 topoisomerase II is comprised of gp39, gp52, and gp60 subunits; topisomerase II catalyzes cleavage and re-ligation of double-stranded DNA
codon start: 1
transl table: 11
product: DNA topoisomerase II
translation: MQLNNRDLKSIIDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVADLGYHHGENSAQDAGALMANTWNNNFPLLDGQGNFGSRTVQKAAASRYIFARVSKNFYNVYKDTEYAPVHQDKEHIPPAFYLPIIPTVLLNGVSGIATGYATYILPHSVSSVKKAVLQALQGKKVTKPKVEFPEFRGEVVEIDGQYEIRGTYKFTSRTQMHITEIPYKYDRETYVSKILDPLENKGFITWDDACGEHGFGFKVKFRKEYSLSDNEEERHAKIMKDFGLIERRSQNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRLAFAKAHFIKKVISGEIVVQGKTRKELTEELSKIDMYSSYVDKLVGMNIFHMTSDEAKKLAEEAKAKKEENEYWKTTDVVTEYTKDLEEIK
SIO_010081: T4p264
subclass of: SO_0000673
so part of: T4p264
location: complement(163876..165204)
location: region:163876-165204:-1
so has part: feature:163876-165204:-1:exon

NP_049875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163876-165204:-1:exon

T4p265
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: 52.1
locus tag: T4p265
note: erroneously identified as ac, has been identified as hypothetical orf 52.1
so part of: sequence
location: complement(165209..165349)
location: region:165209-165349:-1
so has part: feature:165209-165349:-1:exon
subclass of: SO_0000010

1258635
type: Gene
SIO_000068: ncbigene

position:165209:-1
position: 165209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165349:-1
position: 165349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165209-165349:-1:exon

T4p265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: 52.1
locus tag: T4p265
codon start: 1
transl table: 11
product: gp52.1 conserved hypothetical predicted membrane protein
translation: MIKKILGYSLALAALLVALYYGVMFGLIQVVLFISDVIMALHSLVW
SIO_010081: T4p265
subclass of: SO_0000673
so part of: T4p265
location: complement(165209..165349)
location: region:165209-165349:-1
so has part: feature:165209-165349:-1:exon

NP_049876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165209-165349:-1:exon

T4p266
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: ac
locus tag: T4p266
so part of: sequence
location: complement(165342..165497)
location: region:165342-165497:-1
so has part: feature:165342-165497:-1:exon
subclass of: SO_0000010

1258681
type: Gene
SIO_000068: ncbigene

position:165342:-1
position: 165342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165497:-1
position: 165497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165342-165497:-1:exon

T4p266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: ac
locus tag: T4p266
note: predicted membrane protein
codon start: 1
transl table: 11
product: Ac acridine resistance protein
translation: MNIAKLLGVISFICWIVACVLTICIDASSVFSQALAQGMCAYLTFVLLSND
SIO_010081: T4p266
subclass of: SO_0000673
so part of: T4p266
location: complement(165342..165497)
location: region:165342-165497:-1
so has part: feature:165342-165497:-1:exon

NP_049877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165342-165497:-1:exon

T4p267
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: stp
locus tag: T4p267
so part of: sequence
location: complement(165505..165585)
location: region:165505-165585:-1
so has part: feature:165505-165585:-1:exon
subclass of: SO_0000010

1258673
type: Gene
SIO_000068: ncbigene

position:165505:-1
position: 165505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165585:-1
position: 165585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165505-165585:-1:exon

T4p267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: stp
locus tag: T4p267
note: Stp polypeptide (26 amino acids) activates host PrrC lysyl-tRNA restriction system, mutations suppress lethality on prr hosts of T4 PseT and RnlA tRNA repair defects
codon start: 1
transl table: 11
product: activator of host PrrC lysyl-tRNA endonuclease
translation: MSNFHNEHVMQFYRNNLKTKGVFGRQ
SIO_010081: T4p267
subclass of: SO_0000673
so part of: T4p267
location: complement(165505..165585)
location: region:165505-165585:-1
so has part: feature:165505-165585:-1:exon

NP_049878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165505-165585:-1:exon

T4p268
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: D2b
gene: ndd
locus tag: T4p268
gene synonym: D2b
so part of: sequence
location: complement(165585..166040)
location: region:165585-166040:-1
so has part: feature:165585-166040:-1:exon
subclass of: SO_0000010

1258737
type: Gene
SIO_000068: ncbigene

position:166040:-1
position: 166040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165585-166040:-1:exon

T4p268
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: D2b
gene: ndd
locus tag: T4p268
gene synonym: D2b
note: binds host HU protein and host DNA to the membrane prior to degradation
codon start: 1
transl table: 11
product: Ndd-like nucleoid disruption protein
translation: MKYMTVTDLNDAGATVIGTIKGGEWFLGTPHKDILSKPGFYFLVSKLGGPFSNPCVSARFYVGNQRSKQGFSAVLSHIRQRRSQLARTIANNNVPYTVFYLPASKMKPLTTGFGKGQLALAFTRNHHSEYQTLEEMNRMLADNFKFVLQAY
SIO_010081: T4p268
subclass of: SO_0000673
so part of: T4p268
location: complement(165585..166040)
location: region:165585-166040:-1
so has part: feature:165585-166040:-1:exon

NP_049879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165585-166040:-1:exon

T4p269
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: ndd.1
locus tag: T4p269
so part of: sequence
location: complement(166101..166316)
location: region:166101-166316:-1
so has part: feature:166101-166316:-1:exon
subclass of: SO_0000010

1258759
type: Gene
SIO_000068: ncbigene

position:166101:-1
position: 166101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166316:-1
position: 166316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166101-166316:-1:exon

T4p269
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: ndd.1
locus tag: T4p269
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSFKDVKVGEIFCLDNGDQLIRISPLKSTSEKMTVNATLANNSNERFCIENDTETYTVEEFWELSVDCDE
SIO_010081: T4p269
subclass of: SO_0000673
so part of: T4p269
location: complement(166101..166316)
location: region:166101-166316:-1
so has part: feature:166101-166316:-1:exon

NP_049880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166101-166316:-1:exon

T4p270
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: ndd.2
locus tag: T4p270
so part of: sequence
location: complement(166325..166435)
location: region:166325-166435:-1
so has part: feature:166325-166435:-1:exon
subclass of: SO_0000010

1258762
type: Gene
SIO_000068: ncbigene

position:166325:-1
position: 166325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166435:-1
position: 166435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166325-166435:-1:exon

T4p270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: ndd.2
locus tag: T4p270
codon start: 1
transl table: 11
product: Ndd.2 hypothetical predicted outer membrane protein
translation: MMNLLSGWFYILMFYIGVNFPYWMGWSTTAFGFYTP
SIO_010081: T4p270
subclass of: SO_0000673
so part of: T4p270
location: complement(166325..166435)
location: region:166325-166435:-1
so has part: feature:166325-166435:-1:exon

NP_049881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166325-166435:-1:exon

T4p271
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: ndd.2a
locus tag: T4p271
so part of: sequence
location: complement(166432..166554)
location: region:166432-166554:-1
so has part: feature:166432-166554:-1:exon
subclass of: SO_0000010

1258767
type: Gene
SIO_000068: ncbigene

position:166432:-1
position: 166432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166554:-1
position: 166554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166432-166554:-1:exon

T4p271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: ndd.2a
locus tag: T4p271
codon start: 1
transl table: 11
product: periplasmic protein
translation: MLIFALGSVVVGIYLMAVVGMDIHQNGLKSVVETIWNGVK
SIO_010081: T4p271
subclass of: SO_0000673
so part of: T4p271
location: complement(166432..166554)
location: region:166432-166554:-1
so has part: feature:166432-166554:-1:exon

NP_049882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166432-166554:-1:exon

T4p272
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: ndd.3
locus tag: T4p272
so part of: sequence
location: complement(166548..166628)
location: region:166548-166628:-1
so has part: feature:166548-166628:-1:exon
subclass of: SO_0000010

1258755
type: Gene
SIO_000068: ncbigene

position:166548:-1
position: 166548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166628:-1
position: 166628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166548-166628:-1:exon

T4p272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: ndd.3
locus tag: T4p272
codon start: 1
transl table: 11
product: Ndd.3 hypothetical predicted inner membrane protein
translation: MNVNAVLLHLLNGFSIIFFRLYSFSC
SIO_010081: T4p272
subclass of: SO_0000673
so part of: T4p272
location: complement(166548..166628)
location: region:166548-166628:-1
so has part: feature:166548-166628:-1:exon

NP_049883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166548-166628:-1:exon

T4p273
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: ndd.4
locus tag: T4p273
so part of: sequence
location: complement(166636..166764)
location: region:166636-166764:-1
so has part: feature:166636-166764:-1:exon
subclass of: SO_0000010

1258678
type: Gene
SIO_000068: ncbigene

position:166636:-1
position: 166636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166764:-1
position: 166764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166636-166764:-1:exon

T4p273
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: ndd.4
locus tag: T4p273
codon start: 1
transl table: 11
product: Ndd.4 hypothetical predicted inner membrane
translation: MEEQKMKKIIKAIWNVVIILIVLSIFPIVLMIDVLNVYFGFM
SIO_010081: T4p273
subclass of: SO_0000673
so part of: T4p273
location: complement(166636..166764)
location: region:166636-166764:-1
so has part: feature:166636-166764:-1:exon

NP_049884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166636-166764:-1:exon

T4p274
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: denB.-2
gene: ndd.5
locus tag: T4p274
gene synonym: denB.-2
so part of: sequence
location: complement(166815..166913)
location: region:166815-166913:-1
so has part: feature:166815-166913:-1:exon
subclass of: SO_0000010

1258763
type: Gene
SIO_000068: ncbigene

position:166815:-1
position: 166815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166913:-1
position: 166913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166815-166913:-1:exon

T4p274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: denB.-2
gene: ndd.5
locus tag: T4p274
gene synonym: denB.-2
codon start: 1
transl table: 11
product: outer membrane protein
translation: MKILNSVLIACAWWVAQVSAVVVGIHIYYEYF
SIO_010081: T4p274
subclass of: SO_0000673
so part of: T4p274
location: complement(166815..166913)
location: region:166815-166913:-1
so has part: feature:166815-166913:-1:exon

NP_049885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166815-166913:-1:exon

T4p275
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
alternative label: denB.-1
gene: ndd.6
locus tag: T4p275
gene synonym: denB.-1
so part of: sequence
location: complement(166910..166996)
location: region:166910-166996:-1
so has part: feature:166910-166996:-1:exon
subclass of: SO_0000010

1258756
type: Gene
SIO_000068: ncbigene

position:166910:-1
position: 166910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166996:-1
position: 166996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166910-166996:-1:exon

T4p275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
alternative label: denB.-1
gene: ndd.6
locus tag: T4p275
gene synonym: denB.-1
codon start: 1
transl table: 11
product: outer membrane protein
translation: MSSLWWCFVWLISIPVICLTFTFVMRLL
SIO_010081: T4p275
subclass of: SO_0000673
so part of: T4p275
location: complement(166910..166996)
location: region:166910-166996:-1
so has part: feature:166910-166996:-1:exon

NP_049886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166910-166996:-1:exon

T4p276
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: denB
locus tag: T4p276
so part of: sequence
location: complement(167103..167660)
location: region:167103-167660:-1
so has part: feature:167103-167660:-1:exon
subclass of: SO_0000010

1258726
type: Gene
SIO_000068: ncbigene

position:167103:-1
position: 167103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167660:-1
position: 167660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167103-167660:-1:exon

T4p276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: denB
locus tag: T4p276
note: endonuclease targeting gaps and ssDNA in degradation of host DNA
codon start: 1
transl table: 11
product: DenB-like DNA endonuclease IV
translation: MQKTNPGLQRLFQIPTFTLSNSDLTCEMKVKIADTARYSLKQNPNQDKAEVIERCRIAVYAEFFVADWLSGYVNKGQEDVDDPYTYAWDVLAHPKYCGLRVEVKTHQTDSRWISVTTGCSGEYPYGSGINLGPILNHQVADCIIIFNTKEIHPGVIQYTPKFIGDREDLRKVVRKSNYNGWYLSI
SIO_010081: T4p276
subclass of: SO_0000673
so part of: T4p276
location: complement(167103..167660)
location: region:167103-167660:-1
so has part: feature:167103-167660:-1:exon

NP_049887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167103-167660:-1:exon

T4p277
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: denB.1
locus tag: T4p277
so part of: sequence
location: complement(167743..167937)
location: region:167743-167937:-1
so has part: feature:167743-167937:-1:exon
subclass of: SO_0000010

1258677
type: Gene
SIO_000068: ncbigene

position:167743:-1
position: 167743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167937:-1
position: 167937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167743-167937:-1:exon

T4p277
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: denB.1
locus tag: T4p277
note: orf denB.1
codon start: 1
transl table: 11
product: DenB.1 hypothetical protein
translation: MLAYQARVKEEYDQLMLKINALSKFLESAKFLTVSAVEQELLLSQFISMKSYAECLEKRIAQFK
SIO_010081: T4p277
subclass of: SO_0000673
so part of: T4p277
location: complement(167743..167937)
location: region:167743-167937:-1
so has part: feature:167743-167937:-1:exon

NP_049888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167743-167937:-1:exon

T4p278
type: Gene
subclass of: SO_0000704
RO_0002162: 2681598
gene: rIIB
locus tag: T4p278
so part of: sequence
location: complement(167965..168903)
location: region:167965-168903:-1
so has part: feature:167965-168903:-1:exon
subclass of: SO_0000010

1258618
type: Gene
SIO_000068: ncbigene

position:167965:-1
position: 167965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168903:-1
position: 168903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167965-168903:-1:exon

T4p278
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2681598
gene: rIIB
locus tag: T4p278
note: membrane integrity protector; mutants give rapid lysis on various lysogenic strains due to effects of specific prophage products, mistakenly interpreted as related to lysis inhibition
codon start: 1
transl table: 11
product: RIIB lysis inhibitor
translation: MYNIKCLTKNEQAEIVKLYSSGNYTQQELADWQGVSVDTIRRVLKNAEEAKRPKVTISGDITVKVNSDAVIAPVAKSDIIWNASKKFISITVDGVTYNATPNTHSNFQEILNLLVADKLEEAAQKINVRRAVEKYISGDVRIEGGSLFYQNIELRSGLVDRILDSMEKGENFEFYFPFLENLLENPSQKAVSRLFDFLVANDIEITEDGYFYAWKVVRSNYFDCHSNTFDNSPGKVVKMPRTRVNDDDTQTCSRGLHVCSKSYIRHFGSSTSRVVKVKVHPRDVVSIPIDYNDAKMRTCQYEVVEDVTEQFK
SIO_010081: T4p278
subclass of: SO_0000673
so part of: T4p278
location: complement(167965..168903)
location: region:167965-168903:-1
so has part: feature:167965-168903:-1:exon

NP_049889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167965-168903:-1:exon