Enterobacteriaceae endosymbiont of Donacia marginata isolate DmarSym chromosome.
type: Entry
definition: Enterobacteriaceae endosymbiont of Donacia marginata isolate DmarSym chromosome.
sequence version: NZ_CP046184.1
sequence date: 2023-05-06
sequence: sequence
division: CON
label: NZ_CP046184.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN13256189
keyword: RefSeq
source: Enterobacteriaceae endosymbiont of Donacia marginata
organism: Enterobacteriaceae endosymbiont of Donacia marginata
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP046184.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. v3.13.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 300x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/06/2023 01:21:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 452\nCDSs (total) :: 413\nGenes (coding) :: 407\nCDSs (with protein) :: 407\nGenes (RNA) :: 39\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 30\nncRNAs :: 3\nPseudo Genes (total) :: 6\nCDSs (without protein) :: 6\nPseudo Genes (ambiguous residues) :: 0 of 6\nPseudo Genes (frameshifted) :: 1 of 6\nPseudo Genes (incomplete) :: 5 of 6\nPseudo Genes (internal stop) :: 0 of 6\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 462406
topology: circular
so has quality: SO_0000988
location: 1..462406
location: region:1-462406:1
RO_0002162: 2675779

NZ_CP046184
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN13256189
type: BioSample
SIO_000068: biosample

1
title: Bacterial symbionts provide life stage-specific benefits that support larval sap feeding and adult folivory in aquatic reed beetles
author: Reis, F.
author: Kirsch, R.
author: Pauchet, Y.
author: Bauer, E.
author: Bilz, L.C.
author: Fukumori, K.
author: Fukatsu, T.
author: Koelsch, G.
author: Kaltenpoth, M.
journal: Unpublished

2
title: Direct Submission
author: Reis, F.
author: Kirsch, R.
author: Pauchet, Y.
author: Bauer, E.
author: Bilz, L.C.
author: Fukumori, K.
author: Fukatsu, T.
author: Koelsch, G.
author: Kaltenpoth, M.
journal: Submitted (12-NOV-2019) Institute of Organismic and Molecular Evolution, Johannes Gutenberg University Mainz, Hanns-Dieter-Huesch-Weg 15, Mainz 55128, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462406:1
position: 462406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-462406:1:source
so part of: sequence
organism: Enterobacteriaceae endosymbiont of Donacia marginata
mol type: genomic DNA
isolate: DmarSym
isolation source: Beetle Malpighian tubules
host: Donacia marginata
country: Germany

2675779
type: Taxonomy
SIO_000068: taxonomy

GJU04_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: greA
locus tag: GJU04_RS00005
old locus tag: GJU04_00005
so part of: sequence
location: 1..480
location: region:1-480:1
so has part: feature:1-480:1:exon
subclass of: SO_0000010

position:480:1
position: 480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-480:1:exon

GJU04_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: greA
locus tag: GJU04_RS00005
old locus tag: GJU04_00005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874341.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MKNQIPMTLQGIKKLQKELIRLKSIERPKIINSIIEARKHGDLKENAEYQSAREAQSFCEGRIKEIEIKLSNANIIDVTKFLHHNKIIFGSTVYIKNIITNKDIFYKIVGNDEADLKNNLISINAPLARSLIGKKKNDIVKVQTPKGVLKYKILEIKYI
SIO_010081: GJU04_RS00005
subclass of: SO_0000673
so part of: GJU04_RS00005
location: 1..480
location: region:1-480:1
so has part: feature:1-480:1:exon

WP_168892880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-480:1:exon

GJU04_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00010
old locus tag: GJU04_00010
so part of: sequence
location: 740..2313
location: region:740-2313:1
so has part: feature:740-2313:1:exon
subclass of: SO_0000573

position:740:1
position: 740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313:1
position: 2313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740-2313:1:exon

GJU04_RS00010
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 2675779
locus tag: GJU04_RS00010
old locus tag: GJU04_00010
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: GJU04_RS00010
subclass of: SO_0000673
so part of: GJU04_RS00010
location: 740..2313
location: region:740-2313:1
so has part: feature:740-2313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740-2313:1:exon

GJU04_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00015
old locus tag: GJU04_00015
so part of: sequence
location: 2459..5390
location: region:2459-5390:1
so has part: feature:2459-5390:1:exon
subclass of: SO_0000573

position:2459:1
position: 2459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5390:1
position: 5390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2459-5390:1:exon

GJU04_RS00015
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 2675779
locus tag: GJU04_RS00015
old locus tag: GJU04_00015
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: GJU04_RS00015
subclass of: SO_0000673
so part of: GJU04_RS00015
location: 2459..5390
location: region:2459-5390:1
so has part: feature:2459-5390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2459-5390:1:exon

GJU04_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rrf
locus tag: GJU04_RS00020
old locus tag: GJU04_00020
so part of: sequence
location: 5453..5569
location: region:5453-5569:1
so has part: feature:5453-5569:1:exon
subclass of: SO_0000573

position:5453:1
position: 5453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5569:1
position: 5569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5453-5569:1:exon

GJU04_RS00020
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 2675779
gene: rrf
locus tag: GJU04_RS00020
old locus tag: GJU04_00020
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: GJU04_RS00020
subclass of: SO_0000673
so part of: GJU04_RS00020
location: 5453..5569
location: region:5453-5569:1
so has part: feature:5453-5569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5453-5569:1:exon

GJU04_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: murB
locus tag: GJU04_RS00025
old locus tag: GJU04_00025
so part of: sequence
location: 5601..6653
location: region:5601-6653:1
so has part: feature:5601-6653:1:exon
subclass of: SO_0000010

position:5601:1
position: 5601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6653:1
position: 6653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5601-6653:1:exon

GJU04_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: murB
locus tag: GJU04_RS00025
old locus tag: GJU04_00025
EC number: 1.3.1.98
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053579.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MYKKKLCKYSLKKLNTFNININASKIVQVKELKQLCLIWNKYKKKKFPCIILGEGSNVLFLKNFYGLVIINRIKGIYLSESKKYWNLHINSGENWHKLVKFTIRKKIYGLENLALIPGRVGSAPVQNIGAYGASIQNFCEYVDIINPINKKIKRINKKECNFRYRDSVFKYNYKNYIIISVGLSLSKNWIPNLDYHDLKKLKYNNITPQIIFNYICNLRKQKIPHPKIHGNAGSFFKNPIISPILGFKLLKIFSDMPFTLEKNNFKLSAGWLIDKCKFKGYKRKGVMVYSRQSLIIINKFNNSSGIDILKLAIKIYNAVGKKFGVWLEPEIKIIGNYGEIDPCIFFKKNI
SIO_010081: GJU04_RS00025
subclass of: SO_0000673
so part of: GJU04_RS00025
location: 5601..6653
location: region:5601-6653:1
so has part: feature:5601-6653:1:exon

WP_168892881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5601-6653:1:exon

GJU04_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: aroQ
locus tag: GJU04_RS00030
old locus tag: GJU04_00030
so part of: sequence
location: complement(6679..7128)
location: region:6679-7128:-1
so has part: feature:6679-7128:-1:exon
subclass of: SO_0000010

position:6679:-1
position: 6679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7128:-1
position: 7128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6679-7128:-1:exon

GJU04_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: aroQ
locus tag: GJU04_RS00030
old locus tag: GJU04_00030
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874357.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II 3-dehydroquinate dehydratase
translation: MKNINYHILVLNGPNLDLLGNRETKIYGKQSLKDIINILTKKAKKNNCKLSHFQSNAEYKLINYLIKYKNNFNYIIFNPASFTHTSIALRDTLLAINIPFIEVHITNIYKREVFRKKSFFSDISHGVILGLGTYGYVLALKIIFKRLFI
SIO_010081: GJU04_RS00030
subclass of: SO_0000673
so part of: GJU04_RS00030
location: complement(6679..7128)
location: region:6679-7128:-1
so has part: feature:6679-7128:-1:exon

WP_168892882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6679-7128:-1:exon

GJU04_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00035
old locus tag: GJU04_00035
so part of: sequence
location: 7344..8390
location: region:7344-8390:1
so has part: feature:7344-8390:1:exon
subclass of: SO_0000010

position:7344:1
position: 7344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8390:1
position: 8390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7344-8390:1:exon

GJU04_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00035
old locus tag: GJU04_00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein
translation: MLKKFRGMFSNDLSIDLGTANTLIYVKGKGIVLNEPSVVAIRQDKAGFPKSVAAVGYNAKQMLGRTPGNISAIRPMKDGVIADFFITEKMLQHFIKQVHSNSFMKPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVIDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINHVRRNYGSLIGEATAERIKHRIGSAYNNNEELLEMEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMIALEQCPPELAADIAEKGMVLTGGGALLKNFDKLLIEETGIPVSIAEDPLTCVAKGGGKALDMIDIHGGDLFSEE
SIO_010081: GJU04_RS00035
subclass of: SO_0000673
so part of: GJU04_RS00035
location: 7344..8390
location: region:7344-8390:1
so has part: feature:7344-8390:1:exon

WP_168892883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7344-8390:1:exon

GJU04_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mreC
locus tag: GJU04_RS00040
old locus tag: GJU04_00040
so part of: sequence
location: 8419..9240
location: region:8419-9240:1
so has part: feature:8419-9240:1:exon
subclass of: SO_0000010

position:8419:1
position: 8419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9240:1
position: 9240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8419-9240:1:exon

GJU04_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mreC
locus tag: GJU04_RS00040
old locus tag: GJU04_00040
inference: COORDINATES: protein motif:HMM:TIGR00219.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MKLIFNKKPIFKLRIIITIIISIIIIITDIYSNYLIELRYSINNKISPIYFFLNKPFYIYKNTLNYFIEYNVLKKKNKYLYNKILKQNIELYNLQKIKYDNIDLRNILQIPILKEKKSILAEIIPMYFPINRDVLFINKGLKDGVVPGTIVLNDKGIVGQIIINNNKNSQVSLICNKKIFLPVQIKNSDIKFIIHGNGCTKNLQSEYISTDIILNKGDILVTSGLDEQYPIGYPVGIITSIFFDKKKNFNIVYVKPFLQIEKIKYLMLLINSK
SIO_010081: GJU04_RS00040
subclass of: SO_0000673
so part of: GJU04_RS00040
location: 8419..9240
location: region:8419-9240:1
so has part: feature:8419-9240:1:exon

WP_168892884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8419-9240:1:exon

GJU04_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mreD
locus tag: GJU04_RS00045
old locus tag: GJU04_00045
so part of: sequence
location: 9244..9726
location: region:9244-9726:1
so has part: feature:9244-9726:1:exon
subclass of: SO_0000010

position:9244:1
position: 9244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9726:1
position: 9726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9244-9726:1:exon

GJU04_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mreD
locus tag: GJU04_RS00045
old locus tag: GJU04_00045
inference: COORDINATES: protein motif:HMM:NF016019.2
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreD
translation: MKNYFLRLFIYTTFIISLFLQILCTKNSNIILQIPWLILILIYWVLKYPYVINIITSFFIGLLIDFFANYILGIHSLLLCILTYFLSYNYILIINLNIIYKFLLIIYISFIINIIVYYINNINFNYQELFLQSIINSFIWIIIYYSMEKFYYKCQKYFFS
SIO_010081: GJU04_RS00045
subclass of: SO_0000673
so part of: GJU04_RS00045
location: 9244..9726
location: region:9244-9726:1
so has part: feature:9244-9726:1:exon

WP_168892885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9244-9726:1:exon

GJU04_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00050
old locus tag: GJU04_00050
so part of: sequence
location: complement(9796..10086)
location: region:9796-10086:-1
so has part: feature:9796-10086:-1:exon
subclass of: SO_0000010

position:9796:-1
position: 9796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10086:-1
position: 10086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9796-10086:-1:exon

GJU04_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00050
old locus tag: GJU04_00050
inference: COORDINATES: protein motif:HMM:TIGR03342.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TusE/DsrC/DsvC family sulfur relay protein
translation: MYLYKKNDSWNEKIAIQIASLEDIILTINHWKVIYTLRFLYFKYKINPNLRILINYLKKKYNDIHWDSIILFQLFPKGILKQALNIAGLPKNNICL
SIO_010081: GJU04_RS00050
subclass of: SO_0000673
so part of: GJU04_RS00050
location: complement(9796..10086)
location: region:9796-10086:-1
so has part: feature:9796-10086:-1:exon

WP_168892886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9796-10086:-1:exon

GJU04_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00055
old locus tag: GJU04_00055
so part of: sequence
location: complement(10140..10224)
location: region:10140-10224:-1
so has part: feature:10140-10224:-1:exon
subclass of: SO_0000663

position:10140:-1
position: 10140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10224:-1
position: 10224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10140-10224:-1:exon

GJU04_RS00055
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00055
old locus tag: GJU04_00055
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(10188..10190),aa:Ser,seq:tga)
SIO_010081: GJU04_RS00055
subclass of: SO_0000673
so part of: GJU04_RS00055
location: complement(10140..10224)
location: region:10140-10224:-1
so has part: feature:10140-10224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10140-10224:-1:exon

GJU04_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rsmI
locus tag: GJU04_RS00060
old locus tag: GJU04_00060
so part of: sequence
location: 10313..11200
location: region:10313-11200:1
so has part: feature:10313-11200:1:exon
subclass of: SO_0000010

position:10313:1
position: 10313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11200:1
position: 11200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10313-11200:1:exon

GJU04_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rsmI
locus tag: GJU04_RS00060
old locus tag: GJU04_00060
EC number: 2.1.1.198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004889628.1
GO function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MKNNNFKLGNLYIVATPIGNYNDITKRALITLNKVDYILAEDTRKIGILLKNFNIKKKLYSYYEYNEKKKIKLFLEKIQQGYNIALVSDAGTPLINDPGYRIIQLCRTQYVNIKIIPIPGPCAAILALSISGLPTNRFCYEGFLSKKKNKRIKRLHELKLENRTLIFYESTHRVLKCLYDIKKIFGKDRYIVFIKELTKKWENIYGNSISNLIRWLKLDLNRLKGEIVLVISGYKSSNNNYKISSKVIRTFLELKKELSTKKAIKITSDIFSIKKNLLYKFYIKKNTNYDSNNVE
SIO_010081: GJU04_RS00060
subclass of: SO_0000673
so part of: GJU04_RS00060
location: 10313..11200
location: region:10313-11200:1
so has part: feature:10313-11200:1:exon

WP_168892887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10313-11200:1:exon

GJU04_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rnpB
locus tag: GJU04_RS00065
old locus tag: GJU04_00065
so part of: sequence
location: 11208..11555
location: region:11208-11555:1
so has part: feature:11208-11555:1:exon
subclass of: SO_0000011

position:11208:1
position: 11208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11555:1
position: 11555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11208-11555:1:exon

GJU04_RS00065
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2675779
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: GJU04_RS00065
old locus tag: GJU04_00065
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: GJU04_RS00065
subclass of: SO_0000673
so part of: GJU04_RS00065
location: 11208..11555
location: region:11208-11555:1
so has part: feature:11208-11555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11208-11555:1:exon

GJU04_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: folD
locus tag: GJU04_RS00070
old locus tag: GJU04_00070
so part of: sequence
location: complement(11587..12435)
location: region:11587-12435:-1
so has part: feature:11587-12435:-1:exon
subclass of: SO_0000010

position:11587:-1
position: 11587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12435:-1
position: 12435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11587-12435:-1:exon

GJU04_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: folD
locus tag: GJU04_RS00070
old locus tag: GJU04_00070
EC number: 1.5.1.5
EC number: 3.5.4.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013024950.1
GO function: GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
translation: MNAKIINGNIIAEKIYIKIRKKIKNIFLNKKRKPGLGVILIGNNPASKIYIKNKLKICEKLGIFYTKYNFSKNINENKIIEVINFLNKNKYIDGILVQLPLPKTINIIKILETIHPSKDVDGFHPYNIGRLCQRVPLLRPCTSLGILKILKYYNINLCGLNAVIVGASNIVGRPMAMELLLNRCTITITHRFTKDLHHYIKYADLLIVAIGKPNFIPGDWIKVGAIVIDVGINKINENKIVGDIDFNLAKQRASYITPVPGGVGPITVAILMKNILYAYEKA
SIO_010081: GJU04_RS00070
subclass of: SO_0000673
so part of: GJU04_RS00070
location: complement(11587..12435)
location: region:11587-12435:-1
so has part: feature:11587-12435:-1:exon

WP_168892888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11587-12435:-1:exon

GJU04_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00075
old locus tag: GJU04_00075
so part of: sequence
location: 12541..12614
location: region:12541-12614:1
so has part: feature:12541-12614:1:exon
subclass of: SO_0000663

position:12541:1
position: 12541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12614:1
position: 12614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12541-12614:1:exon

GJU04_RS00075
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00075
old locus tag: GJU04_00075
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:12575..12577,aa:Arg,seq:tct)
SIO_010081: GJU04_RS00075
subclass of: SO_0000673
so part of: GJU04_RS00075
location: 12541..12614
location: region:12541-12614:1
so has part: feature:12541-12614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12541-12614:1:exon

GJU04_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00080
old locus tag: GJU04_00080
so part of: sequence
location: complement(13144..13216)
location: region:13144-13216:-1
so has part: feature:13144-13216:-1:exon
subclass of: SO_0000663

position:13144:-1
position: 13144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13216:-1
position: 13216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13144-13216:-1:exon

GJU04_RS00080
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00080
old locus tag: GJU04_00080
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(13181..13183),aa:Lys,seq:ttt)
SIO_010081: GJU04_RS00080
subclass of: SO_0000673
so part of: GJU04_RS00080
location: complement(13144..13216)
location: region:13144-13216:-1
so has part: feature:13144-13216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13144-13216:-1:exon

GJU04_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00085
old locus tag: GJU04_00085
so part of: sequence
location: complement(13233..13305)
location: region:13233-13305:-1
so has part: feature:13233-13305:-1:exon
subclass of: SO_0000663

position:13233:-1
position: 13233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13305:-1
position: 13305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13233-13305:-1:exon

GJU04_RS00085
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00085
old locus tag: GJU04_00085
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(13270..13272),aa:Val,seq:tac)
SIO_010081: GJU04_RS00085
subclass of: SO_0000673
so part of: GJU04_RS00085
location: complement(13233..13305)
location: region:13233-13305:-1
so has part: feature:13233-13305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13233-13305:-1:exon

GJU04_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: gltX
locus tag: GJU04_RS00090
old locus tag: GJU04_00090
so part of: sequence
location: 13443..14846
location: region:13443-14846:1
so has part: feature:13443-14846:1:exon
subclass of: SO_0000010

position:13443:1
position: 13443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14846:1
position: 14846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13443-14846:1:exon

GJU04_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: gltX
locus tag: GJU04_RS00090
old locus tag: GJU04_00090
EC number: 6.1.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499236.1
GO component: GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO function: GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate--tRNA ligase
translation: MKKITTRFAPSPTGYLHIGNIRTALYSWLFARKNKGNFILRIENTDFKRSKKIFIKNIIDTLKWLNIDWDKGPYLQSKRINRYNSIINTMLNEGKAYKCYCSKEELEKNKKKQIINKEKIKYNGKCFNNKLKVNKQLPYTVRIHIPKNKYITFIDTIRGKIIIDNNELDDFIIKRTDGMPTYNFCVVIDDWDMKITHVIRGEEHINNTPKQIHIINAVGANIPIYTHVSIITDKLGKKISKRNNNLDILKYKKKGYLPIALLNYILRLGWSYGNKEIFSLKEMKKLFNLKNLNKSSSIFDIDKLNWFNKYYLSKLSKSEMLNYLENFCNKNNININNGPKLKNLYTIFNKRFNTLEEINNLCFIFYKNPNYNNLLIKNYLNINTQIILELFKLKITNIKLWSIEYINNIFNKILLKLNISYKEIAMTLRLAITGIKNTPPINHIIYLMGKKKTLYHINNAINFIQLK
SIO_010081: GJU04_RS00090
subclass of: SO_0000673
so part of: GJU04_RS00090
location: 13443..14846
location: region:13443-14846:1
so has part: feature:13443-14846:1:exon

WP_168892889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13443-14846:1:exon

GJU04_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hspQ
locus tag: GJU04_RS00095
old locus tag: GJU04_00095
so part of: sequence
location: complement(14921..15241)
location: region:14921-15241:-1
so has part: feature:14921-15241:-1:exon
subclass of: SO_0000010

position:14921:-1
position: 14921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15241:-1
position: 15241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14921-15241:-1:exon

GJU04_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hspQ
locus tag: GJU04_RS00095
old locus tag: GJU04_00095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heat shock protein HspQ
translation: MITSKFGIGQQVRHKLLGFLGVIVDVDPEYSLRDPKINEVAEIKTLRSKPWYHVVMEDDNGQPVHTYLAEAQLSGEPLENEYSENSSLDELSAAIKKQLIKPRLRN
SIO_010081: GJU04_RS00095
subclass of: SO_0000673
so part of: GJU04_RS00095
location: complement(14921..15241)
location: region:14921-15241:-1
so has part: feature:14921-15241:-1:exon

WP_168892890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14921-15241:-1:exon

GJU04_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: alr
locus tag: GJU04_RS00100
old locus tag: GJU04_00100
so part of: sequence
location: 15449..16531
location: region:15449-16531:1
so has part: feature:15449-16531:1:exon
subclass of: SO_0000010

position:15449:1
position: 15449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16531:1
position: 16531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15449-16531:1:exon

GJU04_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: alr
locus tag: GJU04_RS00100
old locus tag: GJU04_00100
EC number: 5.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007714247.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MVRPICAIINSSALKNNLKIIKKIAYKSKIWLVLKADAYGHGIKNIYSIIKNNSDGFAILTLDEAIILRENGCKKPILLLEGFFNKEELCIIYKYFLTITIHNKWQLNKLIQYKSKYPINIYIKINTGMNRLGFPVKDITSIISIIKNKINVNNITLMTHFADASQNSYFVKKQINSIKNNISIYHNFSCSFANSAAILWHSYSYYDWIRTGIILYGASPTGDWKDISTKKIQPVMTLKSKIISIQKIYPGDIIGYNCSYYTKKKQKIGIVACGYADGYPRNINYNKTYVLIKDIKTLILGNVSMDMIAIDLTNIPTAKIGNSVELWGENIKIDDIAKSSNTIGYELMCSVSKRVPRILK
SIO_010081: GJU04_RS00100
subclass of: SO_0000673
so part of: GJU04_RS00100
location: 15449..16531
location: region:15449-16531:1
so has part: feature:15449-16531:1:exon

WP_168892891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15449-16531:1:exon

GJU04_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: metG
locus tag: GJU04_RS00105
old locus tag: GJU04_00105
so part of: sequence
location: complement(16582..18210)
location: region:16582-18210:-1
so has part: feature:16582-18210:-1:exon
subclass of: SO_0000010

position:16582:-1
position: 16582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18210:-1
position: 18210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16582-18210:-1:exon

GJU04_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: metG
locus tag: GJU04_RS00105
old locus tag: GJU04_00105
EC number: 6.1.1.10
inference: COORDINATES: protein motif:HMM:NF001100.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine--tRNA ligase
translation: MLLKKKILVTCALPYSNGSIHLGHMLEHIQADIWVRYHRMYGNEIFFICADDAHGTPVMLKARDLNISTETLINKIYYEHITDLKKFNISYDNYYTTHSNENLFFSRLIFNRLKKRKFIKKKIIQQLYDLVHNIFLPDRFVKGLCPNCKSIDQNGDHCEHCGATYASIELITPISILSNTTPILCNSEHFFFDLPQFSNFLKNWIYSGVLNKKIKNKIYEWFILGLKQWDITRDGPYFGFKIPKSINKYFYVWLDAPIGYISTFKNLCDKKKINFYEWWKKDSNTELYHFIGKDIIYFHSLFWPAILEGSNFRKPTKLFVHGHVTLNGSKMSKSRGNFITAKQWLNFIDSDSLRYYYASKLSYDINDIDFNFYDFIHKINGDIVNKIVNIASRNAFFINNYFNDNLAKNIDISLYLKFVKKSEIIHEYFIQGKFSHVIKQIIILSDKANYYIDKYKPWLLIKDNLKKKKVHSICSMGINMFRVIMIYMKPIMPILSQKTEVFLKKKLCFNNIKLPLVNTKINKFKPLFMRININNLKKMIEK
SIO_010081: GJU04_RS00105
subclass of: SO_0000673
so part of: GJU04_RS00105
location: complement(16582..18210)
location: region:16582-18210:-1
so has part: feature:16582-18210:-1:exon

WP_168892892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16582-18210:-1:exon

GJU04_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00110
old locus tag: GJU04_00110
so part of: sequence
location: complement(18280..18801)
location: region:18280-18801:-1
so has part: feature:18280-18801:-1:exon
subclass of: SO_0000010

position:18280:-1
position: 18280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18801:-1
position: 18801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18280-18801:-1:exon

GJU04_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00110
old locus tag: GJU04_00110
inference: COORDINATES: protein motif:HMM:NF016214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MTVKGHIIFTITSSILIQHFIFSKILYHDDWWRIIPVSIITCLLPDIDNPQSILGRQIKILSYLINKIFGHRGFTHSLLSILSFGFIIFSINLKLNHIFDVRLGLIIGYCSHIIADILTPSGVPLFWPYKKKFRLPLITKKLLNEDIFCYLYLIFSLYLLYPICNNIIMKLFY
SIO_010081: GJU04_RS00110
subclass of: SO_0000673
so part of: GJU04_RS00110
location: complement(18280..18801)
location: region:18280-18801:-1
so has part: feature:18280-18801:-1:exon

WP_168892893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18280-18801:-1:exon

GJU04_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00115
old locus tag: GJU04_00115
so part of: sequence
location: complement(18827..20758)
location: region:18827-20758:-1
so has part: feature:18827-20758:-1:exon
subclass of: SO_0000010

position:18827:-1
position: 18827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20758:-1
position: 20758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18827-20758:-1:exon

GJU04_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00115
old locus tag: GJU04_00115
EC number: 3.1.13.1
inference: COORDINATES: protein motif:HMM:NF003455.0
GO function: GO:0008859 - exoribonuclease II activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006401 - RNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exoribonuclease II
translation: MLYNNILLLKLKEKFTKNLPSIKGFVKILNKKTVILETDNNDIYHISCIYLKNIMEGDYILANIQSNNNKLNVIPIKLLKSNLNIFEGIVKKKTNIIYVIPKKKILYNNIIKCVIGKDIKNNFKDGDKVIAKIIQHPLLKKGNGLFLAEITEILTINNKHLKPWWKILLKYNLSINSPSNNLCKKIEFLDKNIHREDLTKLFFITIDNKDTKDIDDALYIEKISKEELLIYIAISDPTSYIKKDSKIDKIASERMFTNYLPGLTISLLPKKLSENFCSLHPNKKRPVLICKIIIDKNGFLNKKIVFFTGWIKSKAKLNYHDVSDFLEKKGIWEPNNKIKQQIFLLYKFYLYRKKWNYKNIVNFNNIDYKFIIDNKGTILDIVIEKKRIAHKIIETAMITANICASEILYKNLGFGIYNTYYGFNINKINKITELLNKYNIKYNKSFLMTLKGYKTIYNKLQDLKLSFVLNRIKKYQLITLFNVKPGPHFSLGLKRYATWTSPIRKFGDMINHRLIKSIINKEYNIKKPLDTIYINMNQKRYLYRQAQKDLYNFLYLQYFKNISIRNKIFICEIIDILYYGIKIRFIENGAYAFIPKKFLSNNLMINQEKGIILNNNELFFKVTDKIKVIIKKININGIIAKLI
SIO_010081: GJU04_RS00115
subclass of: SO_0000673
so part of: GJU04_RS00115
location: complement(18827..20758)
location: region:18827-20758:-1
so has part: feature:18827-20758:-1:exon

WP_168892894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18827-20758:-1:exon

GJU04_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ssb
locus tag: GJU04_RS00120
old locus tag: GJU04_00120
so part of: sequence
location: complement(20802..21326)
location: region:20802-21326:-1
so has part: feature:20802-21326:-1:exon
subclass of: SO_0000010

position:20802:-1
position: 20802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21326:-1
position: 21326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20802-21326:-1:exon

GJU04_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ssb
locus tag: GJU04_RS00120
old locus tag: GJU04_00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874495.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MASKRGVNKVIIIGFLGKDPEIRYMPNGNPVVNIIVATSSNWKDKNTGENKEKTEWHRIVIFGKLAEISNEYLKKGAQVYIEGYLQTRKWQNQNGQDNYITEIIVSIGGTMQILNNLRQHDNNLLNKDKNSKEIQNDWNKKTNISNNITEKNNNDKLSINKNENILDFEDDLPF
SIO_010081: GJU04_RS00120
subclass of: SO_0000673
so part of: GJU04_RS00120
location: complement(20802..21326)
location: region:20802-21326:-1
so has part: feature:20802-21326:-1:exon

WP_168892895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20802-21326:-1:exon

GJU04_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpoH
locus tag: GJU04_RS00125
old locus tag: GJU04_00125
so part of: sequence
location: complement(21395..22273)
location: region:21395-22273:-1
so has part: feature:21395-22273:-1:exon
subclass of: SO_0000010

position:21395:-1
position: 21395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22273:-1
position: 22273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21395-22273:-1:exon

GJU04_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpoH
locus tag: GJU04_RS00125
old locus tag: GJU04_00125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053563.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoH
translation: MYKNIFTSNIKSSVLPIGTLDSYIHVANNYPMLTSKEEQELSKKLYYKGDLEAAKKLILSHLRFVIHVAKYYSGYGLQQADLIQEGNIGLMKAVRRFNPEIGVRLVSFAIHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKAKQRLGWFNQDEIKMVAKELGVSIKDVYEMESRMSAQDMNDNNTKDNFKNKKINSNIFLKDHNSNFANIIEKDNWSKFISGKLYKAILKLDYRSRNIINLRWLNKNKKKTTLQELANYYGISAERIRQLEKNAMKKLRFLIGNLFSI
SIO_010081: GJU04_RS00125
subclass of: SO_0000673
so part of: GJU04_RS00125
location: complement(21395..22273)
location: region:21395-22273:-1
so has part: feature:21395-22273:-1:exon

WP_168892896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21395-22273:-1:exon

GJU04_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ftsY
locus tag: GJU04_RS00130
old locus tag: GJU04_00130
so part of: sequence
location: complement(22337..23281)
location: region:22337-23281:-1
so has part: feature:22337-23281:-1:exon
subclass of: SO_0000010

position:22337:-1
position: 22337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23281:-1
position: 23281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22337-23281:-1:exon

GJU04_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ftsY
locus tag: GJU04_RS00130
old locus tag: GJU04_00130
inference: COORDINATES: protein motif:HMM:TIGR00064.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal recognition particle-docking protein FtsY
translation: MINKKSKDKIGFFNYLKKKLIKTSKNISKEIFNLFKKKNIIDEKLFNKLQEKLIISDVGIHTTKKIINLTKKYIKSNKLESSSQLYKYIKEEMLKILLPVEIPLIINNKKPFIILIIGVNGVGKTTTIGKLAYYFYKKKKSVLLASGDTFRAGAHEQLFSWSKKSNSFFIHNSKKKDSSAIIFDAISKAKKEEIDILIADTSGRLHNNFLLMEELKKITRVIKKNNNMIINEIMLIIDSNIGQNSINQLRTFHDNIGITGITITKIDGTAKGGIVFSLANEFNIPIRYLCCGEKITDLYLFNAKDFINAIFTDY
SIO_010081: GJU04_RS00130
subclass of: SO_0000673
so part of: GJU04_RS00130
location: complement(22337..23281)
location: region:22337-23281:-1
so has part: feature:22337-23281:-1:exon

WP_168892897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22337-23281:-1:exon

GJU04_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rsmD
locus tag: GJU04_RS00135
old locus tag: GJU04_00135
so part of: sequence
location: 23410..24000
location: region:23410-24000:1
so has part: feature:23410-24000:1:exon
subclass of: SO_0000010

position:23410:1
position: 23410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24000:1
position: 24000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23410-24000:1:exon

GJU04_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rsmD
locus tag: GJU04_RS00135
old locus tag: GJU04_00135
EC number: 2.1.1.171
inference: COORDINATES: protein motif:HMM:TIGR00095.1
GO function: GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
translation: MKKKYNNINIISGKWKGKKIKVINNKILKPTMCFIRENLFNWLMKNDLYKLKCLDCYAGSGILSFEALSRNALLATLIENNKKIFQQLKKNIYLLKIKNIFLIYNNTINFLSKKSNIQYDLIFIDPPFCEKNILLQKTCILLEKNNWLTNNAKIFIECNKKSNCFLLPKNWIKYRQKTFGVVTYFLYQKVCINKKL
SIO_010081: GJU04_RS00135
subclass of: SO_0000673
so part of: GJU04_RS00135
location: 23410..24000
location: region:23410-24000:1
so has part: feature:23410-24000:1:exon

WP_168892898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23410-24000:1:exon

GJU04_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00140
old locus tag: GJU04_00140
so part of: sequence
location: complement(23995..24246)
location: region:23995-24246:-1
so has part: feature:23995-24246:-1:exon
subclass of: SO_0000010

position:23995:-1
position: 23995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24246:-1
position: 24246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23995-24246:-1:exon

GJU04_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00140
old locus tag: GJU04_00140
inference: COORDINATES: protein motif:HMM:NF013379.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA family protein
translation: MFKKNNFYKNADHILDIQGLQCPNTIMMIRKKTLQIKKNETLLIITNDLLVNIDIKYFCHFMNYNIINQKTHDTKHYFLIKKL
SIO_010081: GJU04_RS00140
subclass of: SO_0000673
so part of: GJU04_RS00140
location: complement(23995..24246)
location: region:23995-24246:-1
so has part: feature:23995-24246:-1:exon

WP_168892899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23995-24246:-1:exon

GJU04_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: recA
locus tag: GJU04_RS00145
old locus tag: GJU04_00145
pseudo: true
so part of: sequence
location: 24361..>25338
location: region:24361-25338:1
so has part: feature:24361-25338:1:exon
subclass of: SO_0000010

position:24361:1
position: 24361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25338:1
position: 25338
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24361-25338:1:exon

GJU04_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: recA
locus tag: GJU04_RS00145
old locus tag: GJU04_00145
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005228402.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase RecA
SIO_010081: GJU04_RS00145
subclass of: SO_0000673
so part of: GJU04_RS00145
location: 24361..>25338
location: region:24361-25338:1
so has part: feature:24361-25338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24361-25338:1:exon

GJU04_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: alaS
locus tag: GJU04_RS00150
old locus tag: GJU04_00150
so part of: sequence
location: 25429..28068
location: region:25429-28068:1
so has part: feature:25429-28068:1:exon
subclass of: SO_0000010

position:25429:1
position: 25429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28068:1
position: 28068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25429-28068:1:exon

GJU04_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: alaS
locus tag: GJU04_RS00150
old locus tag: GJU04_00150
EC number: 6.1.1.7
inference: COORDINATES: protein motif:HMM:TIGR00344.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase
translation: MENKIEKVRIMFLDFFHKKKHKIIKGSSLIPDNDTSLLFTNAGMNQFKEYFLGYKEPPYPRITTIQKCIRVGGKHNDLENVGFTNRHHTFFEMLGNFSFGDYFKKEAISYAWELLTDPQWFNLEKKKIYITVYYTDIETYNIWYKNIGIPKKNILLIKDKNNIIYNSDNFWQMSDIGPCGPSTEIFYDLGSDLEGDIRNNLGNRFIEIWNIVFIQFNKNLKGELIPLPIKSVDTGMGLERISSILEGVNSNYKLYFFQKIIKDINKIIKNKNLENNSLKVIADHIRSSIYLIIEGVIPSNEKRGYVLRRIIRRAINHGRILGQKKPFFYKLVKIYIKYINKIEKNFLSRKFNFITNIIKNEEESFNKIINSGILLLEKEIKKSNNNFLSGKQIFYLYDTFGLSPDLIQDICINKKINIDKKEFIKYMDIQRQKSRKNIFFEKKTNLYYKNKISKFNGYNNFTTFSKILDIYLNEKAIKKINIGDYGEIILNVTSFYGESGGQLGDIGFLEKDEKNIFQVYNTKIQGNLIIHIGKMILGSLKINDYLYSKINIINRLMISRNHSATHLLHSILRKKFGNYIEQKGSLITNKYLRFDFSYKNPIELQDIFNIEKKINNYIFKNIPINTYFKKKTELQNNNNIINLFHNKYTETVRIVNIENISQEFCCGTHVLNTQEIGFFIIIKFLNIANGIKRIHAITHNLALEYIQKQNKNTKIISNIFKTDEENLIKSILLYKKKTNILKNNIKELEQYISLKEEKNLIKNIILINNINLIISKIYNFNPKLFNYIIKKLLKKFEKTIIFLSTKWEKKIFFIIKITTNITKNINAKEIIQKNLDKNSCKVNGCANIAQGNINLNEDEYYFFLSKIRLFILNKINKLD
SIO_010081: GJU04_RS00150
subclass of: SO_0000673
so part of: GJU04_RS00150
location: 25429..28068
location: region:25429-28068:1
so has part: feature:25429-28068:1:exon

WP_168892901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25429-28068:1:exon

GJU04_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: csrA
locus tag: GJU04_RS00155
old locus tag: GJU04_00155
so part of: sequence
location: 28181..28372
location: region:28181-28372:1
so has part: feature:28181-28372:1:exon
subclass of: SO_0000010

position:28181:1
position: 28181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28372:1
position: 28372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28181-28372:1:exon

GJU04_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: csrA
locus tag: GJU04_RS00155
old locus tag: GJU04_00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004155916.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator CsrA
translation: MLILTRRVGETLMIGDEVMVTVLGIKGNQVRIGVNAPREIAVHREEIYQRIQAEKNQKTNSLK
SIO_010081: GJU04_RS00155
subclass of: SO_0000673
so part of: GJU04_RS00155
location: 28181..28372
location: region:28181-28372:1
so has part: feature:28181-28372:1:exon

WP_168892902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28181-28372:1:exon

GJU04_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00160
old locus tag: GJU04_00160
so part of: sequence
location: 28462..28547
location: region:28462-28547:1
so has part: feature:28462-28547:1:exon
subclass of: SO_0000663

position:28462:1
position: 28462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28547:1
position: 28547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28462-28547:1:exon

GJU04_RS00160
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00160
old locus tag: GJU04_00160
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:28496..28498,aa:Ser,seq:gct)
SIO_010081: GJU04_RS00160
subclass of: SO_0000673
so part of: GJU04_RS00160
location: 28462..28547
location: region:28462-28547:1
so has part: feature:28462-28547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28462-28547:1:exon

GJU04_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00165
old locus tag: GJU04_00165
so part of: sequence
location: 28559..28631
location: region:28559-28631:1
so has part: feature:28559-28631:1:exon
subclass of: SO_0000663

position:28559:1
position: 28559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28631:1
position: 28631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28559-28631:1:exon

GJU04_RS00165
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00165
old locus tag: GJU04_00165
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:28592..28594,aa:Arg,seq:acg)
SIO_010081: GJU04_RS00165
subclass of: SO_0000673
so part of: GJU04_RS00165
location: 28559..28631
location: region:28559-28631:1
so has part: feature:28559-28631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28559-28631:1:exon

GJU04_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dapD
locus tag: GJU04_RS00170
old locus tag: GJU04_00170
so part of: sequence
location: complement(28727..29551)
location: region:28727-29551:-1
so has part: feature:28727-29551:-1:exon
subclass of: SO_0000010

position:28727:-1
position: 28727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29551:-1
position: 29551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28727-29551:-1:exon

GJU04_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dapD
locus tag: GJU04_RS00170
old locus tag: GJU04_00170
EC number: 2.3.1.117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053749.1
GO function: GO:0008666 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
translation: MKYFRDMIENYFSEYEKNDNLLKDKKVINNINKVIDFLDNGVIRVSENIKGNWIVYEWIKKAILLYFKINKSFLFKGTYNNFYDKIPLKFNNNFKKKNFKKLKCRIVPPTVVRFGSFISNKTILMPSFINIGAFIGEKTMIDTWSTIGSCAQIGNNVHISGGVGIGGVLEPIQSNPTIIEDNCFIGARSEIVEGVIIKKGSVISMGVYIGKSTKIYDRETGLINYGIIPSYSVVVPGTLPSKDGKYNLYCVVIVKKVDKKTLSKTAINDILREF
SIO_010081: GJU04_RS00170
subclass of: SO_0000673
so part of: GJU04_RS00170
location: complement(28727..29551)
location: region:28727-29551:-1
so has part: feature:28727-29551:-1:exon

WP_168892903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28727-29551:-1:exon

GJU04_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ligA
locus tag: GJU04_RS00175
old locus tag: GJU04_00175
so part of: sequence
location: complement(29648..31723)
location: region:29648-31723:-1
so has part: feature:29648-31723:-1:exon
subclass of: SO_0000010

position:29648:-1
position: 29648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31723:-1
position: 31723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29648-31723:-1:exon

GJU04_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ligA
locus tag: GJU04_RS00175
old locus tag: GJU04_00175
EC number: 6.5.1.2
inference: COORDINATES: protein motif:HMM:NF005932.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent DNA ligase LigA
translation: MEKKNLKFYIIKFINILYKIYKLFYYKKKIINLRKKILNYNYKYHVLNSSNILDYQYDKLFSKLEKLENLYPYLKNKYSPTKLVGARYKSLIFFKKIYHNIPMLSLNNVFHKNDLFKKFFLPINKIINKSNFCCELKFDGIAINLLYNNGILISAATRGDGFIGENIIKNILKIKNIPHVLKGENFPKILEIRGEIFITKKNFKKLNEQKFGKYKVFSNTRSAAYGILKINKCINKKIFNLLNFYGYGIGFTDKIIFLNQQEVLTKLECFGIPISKYTKVYYSYDKIINFYKYFKKNRNLLPYNIDGIVIKINNIKKQNILGYTNHAPKWAIAYKFPSQEKLTLLKKIIFQIGRTGVITPIANFNTVNINGVNINFATLYNINEIKRLNLKIGDYIVIQRCGDVIPKVTNVIINKKLLKKRISISIPKLCPSCNSILKKTLNNILYCTAGLSCKDQLKAYLKHFISRDVININFIGEKLINKLVDKNLIKNAIDLLNLNSNVLSQIDNLGNKSINKILQSLQDKQKVTFNKFLFSLGIPEMGIVTCYHISLFFKTLEKFLNTNLTELRSIKNIGKKTSLNIFNFINKQNNINIIKNLLKKIKIIYPKNILKKNYFYQKKITITGKFIFITRFNLVKKLIILGAIINNYISKKTDILILGTNTTSSKLLKATKLNIKMINENKIISLFQKYK
SIO_010081: GJU04_RS00175
subclass of: SO_0000673
so part of: GJU04_RS00175
location: complement(29648..31723)
location: region:29648-31723:-1
so has part: feature:29648-31723:-1:exon

WP_168892904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29648-31723:-1:exon

GJU04_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: cysS
locus tag: GJU04_RS00180
old locus tag: GJU04_00180
so part of: sequence
location: complement(31705..33111)
location: region:31705-33111:-1
so has part: feature:31705-33111:-1:exon
subclass of: SO_0000010

position:31705:-1
position: 31705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33111:-1
position: 33111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31705-33111:-1:exon

GJU04_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: cysS
locus tag: GJU04_RS00180
old locus tag: GJU04_00180
EC number: 6.1.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012989478.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine--tRNA ligase
translation: MLKIFNTLNKQKEIFSPINKKQVKIYVCGITPYDLCHIGHGRTFIVFDIIIRYLKFLEYKVFYIRNITDVDDKIIKLAKKKNKDIKYITQNIIKEISKDFKDLNILSPNFEPKVTNHIKDIIFIIKKLLIKNIAYIAKNGDIMFSIKKYPNYGILSKQNIKLLKLNIRIKNISVKKNYKDFILWKLTNKANIGWDSPWGYGRPGWHIECSTLSRKYLGKNFDIHGGGNDLIFPHHENEIAQSSCMDKEFYVNYWMHTGMMIINNKKMSKSLKNTFKIKDILLQYNREVIRYFLTVTHYRRPIIFNENKLKQAQLAIQKLYISLFYKKNIFSIKNLKNNFFLLEQQFYKSMDDDFNTPKAYSILFKISKKINIAYRKKKYLIANYFILKLKKLGNILGILFYNPKEYLQNNKNSCNYYDEDKIKKLITKRNIARHNKLWDKADLIRNKLKKNNIILEDTDIGTIWKKKI
SIO_010081: GJU04_RS00180
subclass of: SO_0000673
so part of: GJU04_RS00180
location: complement(31705..33111)
location: region:31705-33111:-1
so has part: feature:31705-33111:-1:exon

WP_168892905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31705-33111:-1:exon

GJU04_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dnaB
locus tag: GJU04_RS00185
old locus tag: GJU04_00185
so part of: sequence
location: complement(33230..34615)
location: region:33230-34615:-1
so has part: feature:33230-34615:-1:exon
subclass of: SO_0000010

position:33230:-1
position: 33230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34615:-1
position: 34615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33230-34615:-1:exon

GJU04_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dnaB
locus tag: GJU04_RS00185
old locus tag: GJU04_00185
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005280852.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MKQFKKDIQIERIKIPPHSLEAEQSILGGLMLDNNRWEHIIEKIIVDDFFILSHRIIFHEMNCLIELGKPIDLITLSESLENKKKLNQVGGFAYLAELSKNIPSISNIYAYADIVHERAIIREMISVANEIAEAGYYPNGRNSEDLLNLAESRVFKIAEKRFSKNTKPKNLEEILEVTISKIESFYNSPKKGITGIDTGYHELNKKTSGLQNSDLIIIAARPAMGKTTLAMNICEHTAISQDKPVLIFSLEMPCEQIMIRMLASLSRVNQSKIRTGQLNDDDWKKISNTMGILLKKKNIYIDDSSELTPTEIRLRSRRIFREHNGLSLIMVDYLQLMRVPSLSFNRTLEISEISRSLKSLAKELHVPVVALSQLNRSLEQRSDKRPMNSDLRESGSIEQDADLIMFIYRDEVYNESTNLHGIAEIIIGKQRNGPVGTIKLIFNNQITRFDNYSNYYNNENI
SIO_010081: GJU04_RS00185
subclass of: SO_0000673
so part of: GJU04_RS00185
location: complement(33230..34615)
location: region:33230-34615:-1
so has part: feature:33230-34615:-1:exon

WP_211080566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33230-34615:-1:exon

GJU04_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dusA
locus tag: GJU04_RS00190
old locus tag: GJU04_00190
so part of: sequence
location: complement(34681..35661)
location: region:34681-35661:-1
so has part: feature:34681-35661:-1:exon
subclass of: SO_0000010

position:34681:-1
position: 34681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35661:-1
position: 35661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34681-35661:-1:exon

GJU04_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dusA
locus tag: GJU04_RS00190
old locus tag: GJU04_00190
EC number: 1.3.1.-
EC number: 1.3.1.91
inference: COORDINATES: protein motif:HMM:NF008774.0
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO process: GO:0002943 - tRNA dihydrouridine synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA dihydrouridine(20/20a) synthase DusA
translation: MKNNIPYFRFEIAPMLKKTNKYCRYFYRKLTKKSLLYTEMIHCNFIKKSPIILLENKNVSNIVLQIAGNKPKLLSLCAKQAEKIGYKEINLNLGCPSLRSQKNNFGACLMNHPLIVSDCIKSMSDSVSIPITVKMRIGINNNDSYDFLHKFIDLLINSGCKRFIIHARKALLYKKINTRKNLIIPKLNYKIIYKIKNDFPNIKISINGGIKTLLDVQKHLKYVDGVMLGRQIFKNPMILVDIDKYIYHSKSTITNPIMIVKSMFSYIEKELKKGTSLRTIITPILNIFYGINGSHNFKNFIFDKKNFLKKNNLDVLKKALSLIKIK
SIO_010081: GJU04_RS00190
subclass of: SO_0000673
so part of: GJU04_RS00190
location: complement(34681..35661)
location: region:34681-35661:-1
so has part: feature:34681-35661:-1:exon

WP_168892906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34681-35661:-1:exon

GJU04_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: der
locus tag: GJU04_RS00195
old locus tag: GJU04_00195
so part of: sequence
location: complement(35739..37076)
location: region:35739-37076:-1
so has part: feature:35739-37076:-1:exon
subclass of: SO_0000010

position:35739:-1
position: 35739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37076:-1
position: 37076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35739-37076:-1:exon

GJU04_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: der
locus tag: GJU04_RS00195
old locus tag: GJU04_00195
EC number: 3.6.5.-
inference: COORDINATES: protein motif:HMM:TIGR03594.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTPase Der
translation: MKYKYPIITILGDSNVGKSSLYNILIKKYDALVNKIPNFTIDRKYGNAKIKNYKFICVDTVSYNKFEKKNFLIKEQILLSIKESNIILLIIKGEKLNLTDYKIIDNIRKYNKKIIILLNTKKKYFLDTEFYSLGIDFYRINIMNKNDILKFQKILFFHINKIYIKKNFLDKLNTKFLIKNKNKNIKLAVIGMPNVGKSTLINKFINEKRIIVDSIPGTTRESISISLNHLNKNITIIDTAGIKKKNKITNKIEKISITESYKIINQSNIILYIINGEKKIFCNQDIKIIKYIILQKKPIILIINKIDLIKFQDINFIKTLIKKKFKYFPIISISAKFAINLKNIFKLIYKIYNISKKVYNTSKLMKILSLATKLVLPPMYNGRRIKLKYIHQLKNNFLIFKIYGNQLTKLNNNYKSYLLNFFYKKLQCTGSIINFKFQENKNPYK
SIO_010081: GJU04_RS00195
subclass of: SO_0000673
so part of: GJU04_RS00195
location: complement(35739..37076)
location: region:35739-37076:-1
so has part: feature:35739-37076:-1:exon

WP_168892907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35739-37076:-1:exon

GJU04_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00200
old locus tag: GJU04_00200
so part of: sequence
location: complement(37096..38289)
location: region:37096-38289:-1
so has part: feature:37096-38289:-1:exon
subclass of: SO_0000010

position:37096:-1
position: 37096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38289:-1
position: 38289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37096-38289:-1:exon

GJU04_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00200
old locus tag: GJU04_00200
inference: COORDINATES: protein motif:HMM:NF024753.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PQQ-binding-like beta-propeller repeat protein
translation: MKIKLSKLTILIFIFCSICLISCTYEKKSFLHQNNNSLSKLEKIKLKLIWQNKIEKNNIFFNKLNPFYYKGFLYLANSNGLIYCINIKTGKIIWYINLINKSCFFSSCKDKYLTSGPIISNNYLYVGNQQGKIFSINIKTKSIIWIQNVFSEVLSNFIIRKNILIVHSIGNILQGLNKNNGKILWTVNLGNTNIFSIRGLSTPVLFFDNIITGDDNGLVSSRVVSNGSLIWEQDLLKFDDKENFININDIDVQPVIYNEIVYVSSYNGTFMALNLSTGDIIWEKIYFTHKNFIIDNNNIYLIDIKNRILSLNAKNGHLIWIQDKFKNSKIDNLFIYNKKIFFTNNKGFLYWIDSKKGNFLGNKKIDKYKINFILLINNKLVIQTIYNKIYLFKILII
SIO_010081: GJU04_RS00200
subclass of: SO_0000673
so part of: GJU04_RS00200
location: complement(37096..38289)
location: region:37096-38289:-1
so has part: feature:37096-38289:-1:exon

WP_168892908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37096-38289:-1:exon

GJU04_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hisS
locus tag: GJU04_RS00205
old locus tag: GJU04_00205
so part of: sequence
location: complement(38342..39628)
location: region:38342-39628:-1
so has part: feature:38342-39628:-1:exon
subclass of: SO_0000010

position:38342:-1
position: 38342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39628:-1
position: 39628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38342-39628:-1:exon

GJU04_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hisS
locus tag: GJU04_RS00205
old locus tag: GJU04_00205
EC number: 6.1.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053802.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine--tRNA ligase
translation: MIKKITAIHGMHDCLFPNTLIWKNIENIIENILNNYGYQEIKLPILEKSELFKKTIGEDTDIIEKEMYTLFDKNNNSLTLRPEGTTGFIRAIIEHNIYSKNKRFWYNGPMFRYERPQKGRYRQFNQIGMEILGLKSPYIDAEIIIIINNIWKKLNIINNIFLEINSLGTLKDRKKYIKELIFFLEKNSHLLDLKDRKKIYTNPLRILDSKNKNIKILLENAPKLYNYLNDKSINKFKKLCKILNFMNIQFTINNYLVRGLDYYNDIVFEWKTNDIGEGTSKTICGGGRYDKLINNMSNDKINNGIGCAIGLERLILLIKIIKSLKINIKYLVDIFLIPMENNHILKKILIIGELIRNKFPKLRIITSYLFKNLKKQIIEANKYKSHFIIIIGQKEIDNNSIIIKNLYLKKQIVIPENKLIFYLKKIFH
SIO_010081: GJU04_RS00205
subclass of: SO_0000673
so part of: GJU04_RS00205
location: complement(38342..39628)
location: region:38342-39628:-1
so has part: feature:38342-39628:-1:exon

WP_168892909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38342-39628:-1:exon

GJU04_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tadA
locus tag: GJU04_RS00210
old locus tag: GJU04_00210
so part of: sequence
location: 39810..40286
location: region:39810-40286:1
so has part: feature:39810-40286:1:exon
subclass of: SO_0000010

position:39810:1
position: 39810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40286:1
position: 40286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39810-40286:1:exon

GJU04_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tadA
locus tag: GJU04_RS00210
old locus tag: GJU04_00210
EC number: 3.5.4.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015699727.1
GO function: GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA adenosine(34) deaminase TadA
translation: MSMKNDIYWMKYALYFAKLAKYNGEIPVGAIIVKNNKIISFGNNNTIKKNDPTAHAEIMALRKAGKYLKNYRLLNTTMYVTLEPCLMCSGAIIMSRISRLVFSTYNKKYSNIGSFIDLLGIYNINHKIKISSGILKKECTSMIQDFFSLKRKKNNFCL
SIO_010081: GJU04_RS00210
subclass of: SO_0000673
so part of: GJU04_RS00210
location: 39810..40286
location: region:39810-40286:1
so has part: feature:39810-40286:1:exon

WP_168893267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39810-40286:1:exon

GJU04_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: glyA
locus tag: GJU04_RS00215
old locus tag: GJU04_00215
so part of: sequence
location: 40299..41546
location: region:40299-41546:1
so has part: feature:40299-41546:1:exon
subclass of: SO_0000010

position:40299:1
position: 40299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41546:1
position: 41546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40299-41546:1:exon

GJU04_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: glyA
locus tag: GJU04_RS00215
old locus tag: GJU04_00215
EC number: 2.1.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888958.1
GO function: GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydroxymethyltransferase
translation: MEKNKKISELYSDKELLNIIKKESKRQEENINLIASENYTSRDIMSVQGTILTNKYAEGYPNYRYYGGCKYIDQIENIAINRAKKLFNADYVNVQPHSGSQANFAVYMALLKPGDIIMGLEHSHGGHLTHGSQVNFSGKIYKSISYKTNISGIIDYNYLLKLTKKYKPKMIIGGFSSYSRTCDWAKMRSIADLVNAYFFVDISHIAGLIIAGLYPNPLPYAHVVTSTTHKTLSGPRGGIILSLKKNKHLFKKFDRSIFPGSQGGPLMHIIAAKAIAFKEALQPNFIIYQNQVLKNAKLMVKIFKKYNYKIVSDNTDNHLFIIDLTNKNITGIEAELLLEKYNIIVNKNSIPNDINSPSITSGIRIGTPAITKRGFKEKEIYLLCEYIINILNQKNKYHKNIKNNIIKLCKLFPIY
SIO_010081: GJU04_RS00215
subclass of: SO_0000673
so part of: GJU04_RS00215
location: 40299..41546
location: region:40299-41546:1
so has part: feature:40299-41546:1:exon

WP_281351273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40299-41546:1:exon

GJU04_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00220
old locus tag: GJU04_00220
so part of: sequence
location: 41587..42153
location: region:41587-42153:1
so has part: feature:41587-42153:1:exon
subclass of: SO_0000010

position:41587:1
position: 41587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42153:1
position: 42153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41587-42153:1:exon

GJU04_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00220
old locus tag: GJU04_00220
inference: COORDINATES: protein motif:HMM:NF014068.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DJ-1/PfpI family protein
translation: MKKYHSVLICVTDGIEDIETISSIDLLNRSNINVILISVNNKREIICAHGTKIISDLFFNEIEKINFKNIAAIIIPGGLQASEFFQKNFFLLKFLKKIKKANRIIGAICAAPAMVLSTNNLFPNAKMTGYLGLKYLIPYQQWVKYPVYWDDKYKLLTAQSVKYAIKFNLKLIQIILGKEISLKVEREL
SIO_010081: GJU04_RS00220
subclass of: SO_0000673
so part of: GJU04_RS00220
location: 41587..42153
location: region:41587-42153:1
so has part: feature:41587-42153:1:exon

WP_168892910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41587-42153:1:exon

GJU04_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nusB
locus tag: GJU04_RS00225
old locus tag: GJU04_00225
so part of: sequence
location: complement(42245..42664)
location: region:42245-42664:-1
so has part: feature:42245-42664:-1:exon
subclass of: SO_0000010

position:42245:-1
position: 42245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42664:-1
position: 42664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42245-42664:-1:exon

GJU04_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nusB
locus tag: GJU04_RS00225
old locus tag: GJU04_00225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705700.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription antitermination factor NusB
translation: MKFTGRYYSRKYALQAIYSWQLSKNNFNDIQCYFLNESIKNIKIIDLDYFNDLINGVIVNSFYLDNIMKPFLSRKLIELGQIEKAILRISLYELINRLDVPYKVVINESICLAKKFGGVENSYKFINGVLDKIANKLRI
SIO_010081: GJU04_RS00225
subclass of: SO_0000673
so part of: GJU04_RS00225
location: complement(42245..42664)
location: region:42245-42664:-1
so has part: feature:42245-42664:-1:exon

WP_168892911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42245-42664:-1:exon

GJU04_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ribE
locus tag: GJU04_RS00230
old locus tag: GJU04_00230
so part of: sequence
location: complement(42661..43161)
location: region:42661-43161:-1
so has part: feature:42661-43161:-1:exon
subclass of: SO_0000010

position:42661:-1
position: 42661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43161:-1
position: 43161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42661-43161:-1:exon

GJU04_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ribE
locus tag: GJU04_RS00230
old locus tag: GJU04_00230
EC number: 2.5.1.78
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005182120.1
GO component: GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6,7-dimethyl-8-ribityllumazine synthase
translation: MKIIDENIIAPNAFIAIVISRFNTFINKNLLYSTIDTLQRIGMVQDKNITICWVPGSYEIASVINLLIQKNIYDGIIAIGTIIKGETSHFKYLSQEVCSQISNLSVENNIPISFSILTTDNIEQAIERSGIKRGNRGTEAALTLLEMINIFKSIQLLHTKNKKEVK
SIO_010081: GJU04_RS00230
subclass of: SO_0000673
so part of: GJU04_RS00230
location: complement(42661..43161)
location: region:42661-43161:-1
so has part: feature:42661-43161:-1:exon

WP_168892912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42661-43161:-1:exon

GJU04_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ribD
locus tag: GJU04_RS00235
old locus tag: GJU04_00235
so part of: sequence
location: complement(43191..44303)
location: region:43191-44303:-1
so has part: feature:43191-44303:-1:exon
subclass of: SO_0000010

position:43191:-1
position: 43191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44303:-1
position: 44303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43191-44303:-1:exon

GJU04_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ribD
locus tag: GJU04_RS00235
old locus tag: GJU04_00235
EC number: 1.1.1.193
EC number: 3.5.4.26
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014268465.1
GO function: GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
translation: MYSIDKFYMMYAIKLAKLGIFTTTPNPNVGCIIVNNKKIVGQGYHFKTGEDHAEINALKIAGKYAKGATVYVTLEPCNYTNLTPSCCQALVDAKIKRLVVASKDPNPKVNGQGLKFLYSKGIQITNNILSKKAKLINYGFFKRMNTGIPWIQLKLASSLDGKIALLNGNSKWISSKISRKDVQKLRAKSTAILSTSKTILQDNSTLLVKWNKLDYYIKKIYPKKLLRQPIRIILDRLNTIKPTDKIILFPSKIFLIKSKYTFENWPNYVEQIIVPEINGYFDLKYLFKILGNKKINSILIEAGSILSGYLIAYNLIDELIIYLTPKLLGNITLNLCDINKFMNIINVSNFYFTNIKKIGPDVKLILKPIK
SIO_010081: GJU04_RS00235
subclass of: SO_0000673
so part of: GJU04_RS00235
location: complement(43191..44303)
location: region:43191-44303:-1
so has part: feature:43191-44303:-1:exon

WP_168892913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43191-44303:-1:exon

GJU04_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: leuA
locus tag: GJU04_RS00240
old locus tag: GJU04_00240
so part of: sequence
location: 44574..46118
location: region:44574-46118:1
so has part: feature:44574-46118:1:exon
subclass of: SO_0000010

position:44574:1
position: 44574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46118:1
position: 46118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44574-46118:1:exon

GJU04_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: leuA
locus tag: GJU04_RS00240
old locus tag: GJU04_00240
EC number: 2.3.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014916660.1
GO function: GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO process: GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-isopropylmalate synthase
translation: MKKKIIIFDTTLRDGEQSLKSNLNTKEKIEIALSLEEMGIDIIEVGFPISSPTDYQTAKKISYIIKNSKLCGLARCKEKDIDMVYKSLKKSDNFRIHIFLATSPIHIFTKLKTTLNKVIEKISFMIKYARKYTDDIEFSCEDASRTPINDLCLVVQTAINAGATTINIPDTVGYTFPQEYYNIISYLKRKVDNIDKCIISVHTHNDLGMAVGNAITAINAGARQIEGTINGIGERAGNCALEEVIMALYTRKKNMNFYTNINYQKIYHTSKIVSNICNIPLAIHKAIVGNNAFSHSSGIHQDGMIKNKKTYEILDPENIGFNKTKINLTSKSGRAAVKYHMNLMGYKKNTYNINKLYNKFIKLADKKGQIFNYDLESLAFNSNIENNTEYYSLIYFNVQSNSNLSIATIKLKCGELIKLEAATGLGPVDAIYKTIIRITNYNIKFIQYILTNKSRTQKSIGQVIIKIKYKKKIFHGIGLSKDIIKASIISIIDCLNNIWRSDQVQKNIIKIHKF
SIO_010081: GJU04_RS00240
subclass of: SO_0000673
so part of: GJU04_RS00240
location: 44574..46118
location: region:44574-46118:1
so has part: feature:44574-46118:1:exon

WP_168892914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44574-46118:1:exon

GJU04_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: leuB
locus tag: GJU04_RS00245
old locus tag: GJU04_00245
so part of: sequence
location: 46136..47227
location: region:46136-47227:1
so has part: feature:46136-47227:1:exon
subclass of: SO_0000010

position:46136:1
position: 46136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47227:1
position: 47227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46136-47227:1:exon

GJU04_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: leuB
locus tag: GJU04_RS00245
old locus tag: GJU04_00245
EC number: 1.1.1.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032492732.1
GO function: GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydrogenase
translation: MSDIFKIAILPGDGIGPEIMKQAIKVLEKIEKYITKKIVIDTYIVGGAAINIYGNPLPKKTLYGCEKSNAILFGSVGGPEWDYLPLNKRPEKGSLLKLRKHFNLFANIRPTFFYKDLGILSPLKEKILYKGFDIVCIRELTGGIYFGLPNGRKGKGIDEYAFDTEIYSRFEIERIAHIAFNIALKRKKKICSIDKANVLNTSILWREVLTDISKQYISVKLEHMYIDNAVMQLMKNPSQFDVILCPNLFGDIISDQCAMISGSVGNLPSASFNQNYFGLYEPSGGSAPSIAGKNIANPIAQILSLAMLIEYSLKEKNISQKIKNAIKKILNMGYRTKDLFTDSINEKIITTDDMGTLIMETII
SIO_010081: GJU04_RS00245
subclass of: SO_0000673
so part of: GJU04_RS00245
location: 46136..47227
location: region:46136-47227:1
so has part: feature:46136-47227:1:exon

WP_168892915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46136-47227:1:exon

GJU04_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: leuC
locus tag: GJU04_RS00250
old locus tag: GJU04_00250
so part of: sequence
location: 47247..48641
location: region:47247-48641:1
so has part: feature:47247-48641:1:exon
subclass of: SO_0000010

position:47247:1
position: 47247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48641:1
position: 48641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47247-48641:1:exon

GJU04_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: leuC
locus tag: GJU04_RS00250
old locus tag: GJU04_00250
EC number: 4.2.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004244139.1
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase large subunit
translation: MGKTLYEKIYDKHIICNLKNNTNLLYIDRHFIHEVTSPQAFQGLRNKNRKVYRSNKTFATMDHNVSTKIKDIGASGYIAKKQMETLIKNCNDFNIKLYDIYHPLQGIVHVIGPEQGITLPGMIIVCGDSHTSTHGAFGALSFGIGTSEVEHVLATQTLKQNRFKNMLINITGNISKNITAKDIILSIIRKIGISGGNGYIIEFNGNVIKKLSMESRMTICNMSIEMGAKAGLIAPDNTTLSYLKNKKFTPKDGLWGKALKYWKTLYSDYNAKFDKIIDINITKLTPQISWGTNPEQIIGINESIPLIKSYMNKNKKKLAIKALKYMDLHEGTKLINLKINKVFIGSCTNSRIEDLRSAAKIVVGRKIAPHITALVVPGSNMVKKQAEKEGLDKIFKNAGFEWRYSGCSMCLAMNNDKLKPGERCASTSNRNFEGRQGRNSRTHLVSPIIAAITAIYGYFTNINL
SIO_010081: GJU04_RS00250
subclass of: SO_0000673
so part of: GJU04_RS00250
location: 47247..48641
location: region:47247-48641:1
so has part: feature:47247-48641:1:exon

WP_168892916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47247-48641:1:exon

GJU04_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: leuD
locus tag: GJU04_RS00255
old locus tag: GJU04_00255
so part of: sequence
location: 48659..49258
location: region:48659-49258:1
so has part: feature:48659-49258:1:exon
subclass of: SO_0000010

position:48659:1
position: 48659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49258:1
position: 49258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48659-49258:1:exon

GJU04_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: leuD
locus tag: GJU04_RS00255
old locus tag: GJU04_00255
EC number: 4.2.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890617.1
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase small subunit
translation: MNNKLQYNGIIVPLNISNIDTDVIIPKQFLQKNNKKGFGKYLFNDWRYLDNKSKIINPNFILNKKKFKNSKILLTRDNFGCGSSREHAPWSLLDFGFHTIIASSYADIFYNNAINNKLILIILNKKIIDQLFFIIKKYPGIFCYIDLFYKKITINNVSFNFKMSNDIINFITNDLDQIDITKKYSKEINIFEKTYFEFF
SIO_010081: GJU04_RS00255
subclass of: SO_0000673
so part of: GJU04_RS00255
location: 48659..49258
location: region:48659-49258:1
so has part: feature:48659-49258:1:exon

WP_168892917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48659-49258:1:exon

GJU04_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00260
old locus tag: GJU04_00260
so part of: sequence
location: 49276..49947
location: region:49276-49947:1
so has part: feature:49276-49947:1:exon
subclass of: SO_0000010

position:49276:1
position: 49276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49947:1
position: 49947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49276-49947:1:exon

GJU04_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00260
old locus tag: GJU04_00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside monophosphate kinase
translation: MRIILLGPPGVGKGTYARFISEKYNLPNISIGNMLRNYILNNKYTFLTKKIKKFIKKGIMVPDDIIIKIIKNRLYNIDCKQGFLLDGYPRNILQANILKKENIKINIILEFYIPINEIIKRIIGRRIHLPSGRTYHVIFNPPKIKNKDDITGEKLITRTDDNLITIRNRLKEYFIQTKPLIEYYNKDYIKNKIIYKKINNTLSILDVKKKIDNFLQKLNKIKK
SIO_010081: GJU04_RS00260
subclass of: SO_0000673
so part of: GJU04_RS00260
location: 49276..49947
location: region:49276-49947:1
so has part: feature:49276-49947:1:exon

WP_168892918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49276-49947:1:exon

GJU04_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dapA
locus tag: GJU04_RS00265
old locus tag: GJU04_00265
so part of: sequence
location: 50062..50940
location: region:50062-50940:1
so has part: feature:50062-50940:1:exon
subclass of: SO_0000010

position:50062:1
position: 50062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50940:1
position: 50940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50062-50940:1:exon

GJU04_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dapA
locus tag: GJU04_RS00265
old locus tag: GJU04_00265
EC number: 4.3.3.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008460195.1
GO function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate synthase
translation: MFTGSIVALITPMDIKGNLCKESLQRLIKYHINSGTKAIVIMGTTGEAATLTYNEHIDVIMYALDFSEKKIPIIAGTGFNSTSKSIKMISILENSGIIGCLNITPYYNRPTQEGLYQHFKEIANNTKLPQILYNVPSRTGCDLLPKTIYKLSKISNIVGIKEATGDLSRVNKIKNLIKNNFFLISGDDKTAFEFMLLGGDGIISVTANIVASKMSKFCNYIKEKKINKAKKINKELIILHNQLFLESNPIPIKWAVKRLGLIKNDKMRLPMTPLTEYNQKIIENTLKKLKLI
SIO_010081: GJU04_RS00265
subclass of: SO_0000673
so part of: GJU04_RS00265
location: 50062..50940
location: region:50062-50940:1
so has part: feature:50062-50940:1:exon

WP_168892919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50062-50940:1:exon

GJU04_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: glyS
locus tag: GJU04_RS00270
old locus tag: GJU04_00270
so part of: sequence
location: complement(50932..53007)
location: region:50932-53007:-1
so has part: feature:50932-53007:-1:exon
subclass of: SO_0000010

position:50932:-1
position: 50932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53007:-1
position: 53007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50932-53007:-1:exon

GJU04_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: glyS
locus tag: GJU04_RS00270
old locus tag: GJU04_00270
EC number: 6.1.1.14
inference: COORDINATES: protein motif:HMM:TIGR00211.2
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit beta
translation: MCNNILLLEIGIEEIPSNYLLKISQIILKNFKNELKKNHFEYKIIKCFFTSRRIALQIYFINIIQSNYFFNIKGPFISNEKNIFENKIIQHWIKKYKIKDIKNIFYKNKYIFYKKIIKGLHIKHLLSNIIINSLKNIISIPNFMFWDENIFKFIRPIRNIILVLGKKNIKKKILNLTSNNIIKGHRFMCQKKIILKNSKKYEELLFEKGKIIVDFFKRKNIIFDKIKKIADKFHAIIKIDNIFLEELSAMVEWPVVLIGKFDKKFLKLPSEILSYVMIKYQKYIPLYDKKNNLLSNFLILINIETTNNERIINNNEQIIKSRFKDIQFFFKNDLKIKFEQYLSKLKNIIFQKNLGNLFEKTIRIEKISQYIAKKIINNINIIDCIRASKLSKCDLATQMVYEFPDLQGIIGMYYAQYNQENKNVAQAIKEQYQYKKNNFIPKNMVSCVLFISDKIDTIVGMFSISLIPTGDKDPFSLKYITLIIIRIIMEKKIKINLIELINFSLFLYKKNLIEKKKILKQILFFIKKICKNWYISLGYKKNIINSILDNKINDLLILDYKIKALNLFIKNEKKQSNFLIFTYKRINNILLKNKEYINKNNQINTYLLKDKEEIILFRHIIKLSKILKLKIKNNEYYTILLILSELYYPVNNFFKKVTINHTDNKFKKNRVLILYYIKEYLLTVTNISHLY
SIO_010081: GJU04_RS00270
subclass of: SO_0000673
so part of: GJU04_RS00270
location: complement(50932..53007)
location: region:50932-53007:-1
so has part: feature:50932-53007:-1:exon

WP_168892920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50932-53007:-1:exon

GJU04_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: glyQ
locus tag: GJU04_RS00275
old locus tag: GJU04_00275
so part of: sequence
location: complement(53037..53915)
location: region:53037-53915:-1
so has part: feature:53037-53915:-1:exon
subclass of: SO_0000010

position:53037:-1
position: 53037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53915:-1
position: 53915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53037-53915:-1:exon

GJU04_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: glyQ
locus tag: GJU04_RS00275
old locus tag: GJU04_00275
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012004542.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit alpha
translation: MKEFNEKTFQGMIFILQNYWAKQGCSIIQAIDTEVGAATSHPMTCLYAIGKKPIKLAYIQLSRRPSDGRYGKNSNRLQQYYQFQVIMKPPPHNIQDLYLKSLEKLKIDLKNNNLCFIDDNWENPTLGAYGIGWEIWLNGIEITQFTYFQQMGGIICKPITGEITYGLERLAMHIQNVKNIFDLIWNKNKDSCITYKDFFYKNEKEQSIYNFEYTNINFIISCFHNYEKEISYLLNLKKPLIFPAYEKLLKASHCFNLLEARRFLSHTERQRYVLKLRNMTKLIVIKYYNYIK
SIO_010081: GJU04_RS00275
subclass of: SO_0000673
so part of: GJU04_RS00275
location: complement(53037..53915)
location: region:53037-53915:-1
so has part: feature:53037-53915:-1:exon

WP_168893269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53037-53915:-1:exon

GJU04_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00280
old locus tag: GJU04_00280
so part of: sequence
location: 54092..55030
location: region:54092-55030:1
so has part: feature:54092-55030:1:exon
subclass of: SO_0000010

position:54092:1
position: 54092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55030:1
position: 55030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54092-55030:1:exon

GJU04_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00280
old locus tag: GJU04_00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126260.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MNNISKKNFFKKEKNEYNKLIIKATNLAILLSFTLLILKLLAWWQTKSISMLAACVDSLVDITSSSTNLLIIYYSLQPADLEHTFGHGKAESLSALTQSIFICITAIFLFLNSLKYISHPTKLYYPIIGIIVIIISFFLTLILVIFQKKVIAKTNSQATHADMIHYESDILINSAILIALILNFFNIKQADSFIALIISIFIFYNAFKVGYKAIQSLLDRSLPEHEKKIIIDLITSWPKVKGAHQLKTRQSGPTRFIQLHLVLEDNLPLLASHSIAKKIENALHKKFPYSDIIIHQDPYSIVSEKYKGFFKN
SIO_010081: GJU04_RS00280
subclass of: SO_0000673
so part of: GJU04_RS00280
location: 54092..55030
location: region:54092-55030:1
so has part: feature:54092-55030:1:exon

WP_168892921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54092-55030:1:exon

GJU04_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: pfkA
locus tag: GJU04_RS00285
old locus tag: GJU04_00285
so part of: sequence
location: 55068..56030
location: region:55068-56030:1
so has part: feature:55068-56030:1:exon
subclass of: SO_0000010

position:55068:1
position: 55068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56030:1
position: 56030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55068-56030:1:exon

GJU04_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: pfkA
locus tag: GJU04_RS00285
old locus tag: GJU04_00285
EC number: 2.7.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315881.1
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphofructokinase
translation: MIQKIGVLTSGGDAPGMNAAIRGVVRTALGYNIEVFGIYNGYLGLYNNHIIKLNRYSVSDIINKGGTFLGSARFIQFKNKKIRSIAINNMKKNGINALVVIGGDGTYMGAKLLTEMGFPCIGIPGTIDNDVAGTDYSIGYSTALETIVQAIDKLRDTSTSHQRISIVEIMGRHCGDLTLSAAIAGGCEFIVLPEINYNKEDLVKEIQIGIEKGKKHAIVLITEFICDINKLADFIQKKIKRETRTTVLGYIQRGGSPVAYDRILGSRMGSFAVELLYKGYGGRCIGIKNDKMVHHDIIDAILNMKKIFKKDLWDTAKKLF
SIO_010081: GJU04_RS00285
subclass of: SO_0000673
so part of: GJU04_RS00285
location: 55068..56030
location: region:55068-56030:1
so has part: feature:55068-56030:1:exon

WP_168892922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55068-56030:1:exon

GJU04_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplY
locus tag: GJU04_RS00290
old locus tag: GJU04_00290
so part of: sequence
location: 56055..56342
location: region:56055-56342:1
so has part: feature:56055-56342:1:exon
subclass of: SO_0000010

position:56055:1
position: 56055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56342:1
position: 56342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56055-56342:1:exon

GJU04_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplY
locus tag: GJU04_RS00290
old locus tag: GJU04_00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006537318.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L25
translation: MKNIKFLKRIEVGKKFSRRLRINNKFPAIIYGKNKKEIPIIINNEDIININFKNFFKKKIQLIDGKKKIYKVKIIDIQYHPYKNTKIFHIDFLFI
SIO_010081: GJU04_RS00290
subclass of: SO_0000673
so part of: GJU04_RS00290
location: 56055..56342
location: region:56055-56342:1
so has part: feature:56055-56342:1:exon

WP_168892923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56055-56342:1:exon

GJU04_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dapB
locus tag: GJU04_RS00295
old locus tag: GJU04_00295
so part of: sequence
location: complement(56415..57191)
location: region:56415-57191:-1
so has part: feature:56415-57191:-1:exon
subclass of: SO_0000010

position:56415:-1
position: 56415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57191:-1
position: 57191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56415-57191:-1:exon

GJU04_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dapB
locus tag: GJU04_RS00295
old locus tag: GJU04_00295
EC number: 1.17.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069829.1
GO function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate reductase
translation: MKNNKINLAIAGVNGRMGKSILKILNTSKINNLTLNGVTEHKLSLKKENKILYKSNFLNIKSNLIDIKNQFDILIDFTNPKTTLENINFCKKYKKKIVIGTTGFTEQQKLIIKKISKDIAVILSSNFSQGINFLLKIIENFTKILCKNKEINNLDIDIIEKHHKNKKDSPSGTALSLKDMIIYNYKKFNIVKKVTCHSIRAADLYGEHNILFSFIGEQIELIHKASNRIPFAKGAINAAIWLSNKKTGIYNMHDVLGI
SIO_010081: GJU04_RS00295
subclass of: SO_0000673
so part of: GJU04_RS00295
location: complement(56415..57191)
location: region:56415-57191:-1
so has part: feature:56415-57191:-1:exon

WP_168892924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56415-57191:-1:exon

GJU04_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lspA
locus tag: GJU04_RS02275
pseudo: true
so part of: sequence
location: complement(57207..57640)
location: region:57207-57640:-1
so has part: feature:57207-57640:-1:exon
subclass of: SO_0000010

position:57207:-1
position: 57207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57640:-1
position: 57640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57207-57640:-1:exon

GJU04_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lspA
locus tag: GJU04_RS02275
inference: COORDINATES: protein motif:HMM:NF013421.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: signal peptidase II
SIO_010081: GJU04_RS02275
subclass of: SO_0000673
so part of: GJU04_RS02275
location: complement(57207..57640)
location: region:57207-57640:-1
so has part: feature:57207-57640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57207-57640:-1:exon

GJU04_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ileS
locus tag: GJU04_RS00310
old locus tag: GJU04_00310
so part of: sequence
location: complement(57664..60447)
location: region:57664-60447:-1
so has part: feature:57664-60447:-1:exon
subclass of: SO_0000010

position:57664:-1
position: 57664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60447:-1
position: 60447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57664-60447:-1:exon

GJU04_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ileS
locus tag: GJU04_RS00310
old locus tag: GJU04_00310
EC number: 6.1.1.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010895974.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoleucine--tRNA ligase
translation: MKNKFNLNLPKTKFPMKACLTKNELTILEQWEKDNLYKKISNTKKNRKKFILHDGPPYANGNIHIGHAFNKILKDIIIKFKNMDGYYTSFIPGWDCHGLPIEQKVEEILKKKNKKISKKQFRIECRKYAFEQIKKQKKDFMRLGICADWLNPYLTMNFKTEANIVRTLGEIIKNNYIYKGEKPVHWCTKCFSSLAGAEVDYVKKKTLTCYVMFNIINTNFFKKNLNIKIKNYNISFLIWTTTPWTIPANRAIVLHPEIYYQLIKIDKNIIIIAKNLVNVIMNKKKIREWKILLEIKGKFFKNILIKNPINNNISSLIIDNYVSEKSGTGIVHMAPNHGLDDYNICNKHKITCLKNIIDKKGFFKNGIHPKLNKINIFSSEKIITQILIEQNTLFLIDNYIHNYPYCWRHKIPIIYRSTPQWFISIDKQNLRKSAKKLIKKVEWIPSWGYERMNLMLDKRPDWCISRQRIWGIPIPLFINKKTQKIHINSLKFIKKIASMIEKNGIQAWWDLDIKEFLGEDACLYDKVIDVLDVWFDSGSTYRSIIKQIEEFKNNKIDIYLEGNDQYRGWFISSLIISTAIDNNIPYKTVISHGFTVDNHGKKMSKSLGNIIKPQNIVNTLGSDILRLWVASTDYTNEINISSNILQRITETYRRIRNTVRFLLSNLDQFIPEKNIIQEKNMLVLDKWIIHKTKITQDKIIKYYNIYNIKNVIKEIMQFCSIDLGSIYFDIIKDRQYTFKRYSIERLSCQTSLYMILESLVRWIAPILSFTAHEIWNYIPGKRSKYVFTAEWYSKLFYLSSSNKMNYEYWKDIFIFKDEINKIIEYARKRKIIGSSLEANITVFVNKNIYKKLIMLGTELRFLLLVSHISFYYEEKTSINKLIKSFKIKKSKYYKCQRCWYYSKNIINNICNRCQLNTIGNGEKRLFI
SIO_010081: GJU04_RS00310
subclass of: SO_0000673
so part of: GJU04_RS00310
location: complement(57664..60447)
location: region:57664-60447:-1
so has part: feature:57664-60447:-1:exon

WP_168892926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57664-60447:-1:exon

GJU04_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsT
locus tag: GJU04_RS00315
old locus tag: GJU04_00315
so part of: sequence
location: 60604..60867
location: region:60604-60867:1
so has part: feature:60604-60867:1:exon
subclass of: SO_0000010

position:60604:1
position: 60604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60867:1
position: 60867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60604-60867:1:exon

GJU04_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsT
locus tag: GJU04_RS00315
old locus tag: GJU04_00315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704649.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MANIKSSKKRALKSEEKRKHNINYRSMLRTFIKKVKNAISDKNIELSKKNFQKMQSVIDKQVQKKLIHKNKASRYKSRIYNKIINLL
SIO_010081: GJU04_RS00315
subclass of: SO_0000673
so part of: GJU04_RS00315
location: 60604..60867
location: region:60604-60867:1
so has part: feature:60604-60867:1:exon

WP_168892927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60604-60867:1:exon

GJU04_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: erpA
locus tag: GJU04_RS00320
old locus tag: GJU04_00320
so part of: sequence
location: 60899..61240
location: region:60899-61240:1
so has part: feature:60899-61240:1:exon
subclass of: SO_0000010

position:60899:1
position: 60899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61240:1
position: 61240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60899-61240:1:exon

GJU04_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: erpA
locus tag: GJU04_RS00320
old locus tag: GJU04_00320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091326.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster insertion protein ErpA
translation: MNIHLMNVPVPITLTKRALKKIKKLYNKNINFRIFILGGGCSGFKYDFILDKKIKKNDIVINLSDINIVIDKISMQYLSGSIIDYIESIEESKFIIKNPYMKNTCNCGSSFDI
SIO_010081: GJU04_RS00320
subclass of: SO_0000673
so part of: GJU04_RS00320
location: 60899..61240
location: region:60899-61240:1
so has part: feature:60899-61240:1:exon

WP_246208782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60899-61240:1:exon

GJU04_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: gpmA
locus tag: GJU04_RS00325
old locus tag: GJU04_00325
so part of: sequence
location: 61273..61971
location: region:61273-61971:1
so has part: feature:61273-61971:1:exon
subclass of: SO_0000010

position:61273:1
position: 61273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61971:1
position: 61971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61273-61971:1:exon

GJU04_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: gpmA
locus tag: GJU04_RS00325
old locus tag: GJU04_00325
EC number: 5.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:NP_308810.1
GO function: GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
translation: MSNTKLVLLRHGQSEWNKKNLFTGWHDIELSPEGEIEAIQAGKVLKKNNFKFDYAYTSFLKRAINTLWLTLKELDQLWIPVKKTWRLNERHYGKLQGMNKDEITNKFGIKKVQKWRRSFISEPPSLSINDPRWSRFDQKYSKLEDYQLPLSESLSKTLERVIYIWKNSISSKIMNGERIIIVAHGNSLRALIKYIENINDADIINLNIATGIPIIYEFDNNLNYKKKYYLNN
SIO_010081: GJU04_RS00325
subclass of: SO_0000673
so part of: GJU04_RS00325
location: 61273..61971
location: region:61273-61971:1
so has part: feature:61273-61971:1:exon

WP_168892928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61273-61971:1:exon

GJU04_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: pta
locus tag: GJU04_RS00330
old locus tag: GJU04_00330
so part of: sequence
location: complement(61991..64132)
location: region:61991-64132:-1
so has part: feature:61991-64132:-1:exon
subclass of: SO_0000010

position:61991:-1
position: 61991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64132:-1
position: 64132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61991-64132:-1:exon

GJU04_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: pta
locus tag: GJU04_RS00330
old locus tag: GJU04_00330
EC number: 2.3.1.8
inference: COORDINATES: protein motif:HMM:NF004167.0
GO function: GO:0016407 - acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate acetyltransferase
translation: MLKIIMSIPINIDIHFFTSINIGLLNYFNNKKLRCKFFKPISQIENYNFDYTNNILNQYNNLNIKSINSLKINDINLLNNDTTYNNIIENIIKKYFQNIKNTDIILIEGIIPFYIEQILFKLNCDIANIFDAKIIFVTSMCSKNETLKKTKSIIDIIFKKNIYDLKSKYIFSFVKEKFTNQNSNPFFYNINIFKNFFLKKEKNIINNNLLSFNKEKIICIPWLKNFIFGIDLKIICIYLNCNLPINLKYNNIKYIIFFNKQIFVNKEFFVKSLIIISLKDNQNIKKIYNILSKNIFCKAILFTDFIKKESDLIIKKFSKIINNNIYLIYTKNNFYKIYLKIQSIYKNNFPTSDDKLILNIINYINLYIPSKILNNKKYINYKIYNSPFIFKYNLINKACKFKKTILLPEGNELRTLKAAAICSKKNIAKCILLGNKKEIINIAKINNIDLNDNMNIIDPKYIRNNYIEKLMYIRKDKLLNENNAIKLLKDNMFLATMMLKNNEVDGIVSGANATTANTIRPALQIIKTLPEYSIISSIFIMLLPKNILIFSDCAINPNPNYKQLAEIAIQSAQTSKLFNIKPKIAMISYSTGNSSTGIEVEKVYKATKLVQNKLPNLIIDGPLQYDAAVIKSIGKYKAPKSLVAGKANIIIFPDLNTGNTTYKAVQRTSKIISIGPILQGIKKPINDLSRGASIEDIIYTIAVTVIQAGSKKK
SIO_010081: GJU04_RS00330
subclass of: SO_0000673
so part of: GJU04_RS00330
location: complement(61991..64132)
location: region:61991-64132:-1
so has part: feature:61991-64132:-1:exon

WP_168892929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61991-64132:-1:exon

GJU04_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00335
old locus tag: GJU04_00335
so part of: sequence
location: complement(64170..65378)
location: region:64170-65378:-1
so has part: feature:64170-65378:-1:exon
subclass of: SO_0000010

position:64170:-1
position: 64170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65378:-1
position: 65378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64170-65378:-1:exon

GJU04_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00335
old locus tag: GJU04_00335
EC number: 2.7.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013087897.1
GO function: GO:0008776 - acetate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO process: GO:0006085 - acetyl-CoA biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetate kinase
translation: MSNKLILVINCGSSSLKFSVINVLEKKILLFGLAENFNTKHSYVKWYFNNIKKKKIFYSKINHKIILNYIINIILKKNLLYNNILAVGHRVVHGGEKFIQSVIITKKVLKAIKNASIFAPLHNPIQLIGIKEIIKILPHLKNKQIAVFDTSFHQTIPEKSYLYALPIEFYEKYKIRRYGAHGTSHRYVTKIAAKILNIPLNKLNCISCHLGNGSSITAIQNGKSIDTSMGLTPLEGLVMGTRCGDIDPAIIFYMFNILNIKIDEIYNILTKKSGMLGLTTITSDFRYIENNYFKDIKIKRAADIFIYRLAKYIASYSILMKEKIDAIIFTGGIGENSVLIREKTIEKLKILNIFIDHKLNNEIKFGKTGLINTTHSIPILIIPTNEELMIAQDTFNIIINNK
SIO_010081: GJU04_RS00335
subclass of: SO_0000673
so part of: GJU04_RS00335
location: complement(64170..65378)
location: region:64170-65378:-1
so has part: feature:64170-65378:-1:exon

WP_168892930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64170-65378:-1:exon

GJU04_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00340
old locus tag: GJU04_00340
so part of: sequence
location: 65527..65597
location: region:65527-65597:1
so has part: feature:65527-65597:1:exon
subclass of: SO_0000663

position:65527:1
position: 65527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65597:1
position: 65597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65527-65597:1:exon

GJU04_RS00340
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00340
old locus tag: GJU04_00340
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:65559..65561,aa:Cys,seq:gca)
SIO_010081: GJU04_RS00340
subclass of: SO_0000673
so part of: GJU04_RS00340
location: 65527..65597
location: region:65527-65597:1
so has part: feature:65527-65597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65527-65597:1:exon

GJU04_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00345
old locus tag: GJU04_00345
so part of: sequence
location: 65629..65715
location: region:65629-65715:1
so has part: feature:65629-65715:1:exon
subclass of: SO_0000663

position:65629:1
position: 65629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65715:1
position: 65715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65629-65715:1:exon

GJU04_RS00345
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00345
old locus tag: GJU04_00345
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:65663..65665,aa:Leu,seq:taa)
SIO_010081: GJU04_RS00345
subclass of: SO_0000673
so part of: GJU04_RS00345
location: 65629..65715
location: region:65629-65715:1
so has part: feature:65629-65715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65629-65715:1:exon

GJU04_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00350
old locus tag: GJU04_00350
so part of: sequence
location: complement(65726..66196)
location: region:65726-66196:-1
so has part: feature:65726-66196:-1:exon
subclass of: SO_0000010

position:65726:-1
position: 65726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66196:-1
position: 66196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65726-66196:-1:exon

GJU04_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00350
old locus tag: GJU04_00350
inference: COORDINATES: protein motif:HMM:NF014704.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CvpA family protein
translation: MLIIDYLFILILLFSTIFSFIRGFIKEILTIFVWFISFYLSRKYYDYFLIIKDYTIINFYFKKIFLLFIYFLLTIISGNIVKKFLNKKIIYFYYINNFNKILGLFFGILKGYLIIFILLYSLKHIDKNLYNYFLNKKQSFFFIYFNNILQKYEYFL
SIO_010081: GJU04_RS00350
subclass of: SO_0000673
so part of: GJU04_RS00350
location: complement(65726..66196)
location: region:65726-66196:-1
so has part: feature:65726-66196:-1:exon

WP_168892931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65726-66196:-1:exon

GJU04_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: truA
locus tag: GJU04_RS00355
old locus tag: GJU04_00355
so part of: sequence
location: complement(66321..67148)
location: region:66321-67148:-1
so has part: feature:66321-67148:-1:exon
subclass of: SO_0000010

position:66321:-1
position: 66321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67148:-1
position: 67148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66321-67148:-1:exon

GJU04_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: truA
locus tag: GJU04_RS00355
old locus tag: GJU04_00355
EC number: 5.4.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010846980.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(38-40) synthase TruA
translation: MINLKFKKKYKFALGVEYNGTNYHGWQKQKKYHKKKTIQEYLEKVISKIANHDVIIFCAGRTDIGVHSLGQVVHFETYSFRKKKSWILGINSLLPKDIVIKWIVSVKKEFHARFSALSRRYFYIIYNNKYRSAIFNNLSTLSNHKLNIKKIKNAMKYLLGEHNFSSFQSGKKKNGSSFRNILNCDIKKYGNYIILDIKANAFLYHMVRNIVGSLIEIGIGNQNEDWLLELIKSEDRTKAAVTVKPNGLFLAGVEYPTHFRIPNIKHNLFFFKKLI
SIO_010081: GJU04_RS00355
subclass of: SO_0000673
so part of: GJU04_RS00355
location: complement(66321..67148)
location: region:66321-67148:-1
so has part: feature:66321-67148:-1:exon

WP_168892932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66321-67148:-1:exon

GJU04_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00360
old locus tag: GJU04_00360
so part of: sequence
location: 67289..68503
location: region:67289-68503:1
so has part: feature:67289-68503:1:exon
subclass of: SO_0000010

position:67289:1
position: 67289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68503:1
position: 68503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67289-68503:1:exon

GJU04_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00360
old locus tag: GJU04_00360
EC number: 3.4.16.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012442071.1
note: penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine-type D-Ala-D-Ala carboxypeptidase
translation: MKIYKKNNKFVNKVLKLITTIFIVYSTIIYANENIFNIISQPEIDVKSYILIDYNTGIILTEKNSNDIQKPASLAKIMTSYVIGKALSKNRVHRNDVVTVSKNAWAAGNNEFNGSSLMFLKIGDHISVKNLIKGIILQSGNDACVAIAEYISGNQQNFVRLMNFYAQKIGLKNTLFKNVHGLDEDGQYTSAKDMAIMGKSLIHDFPYEYNIYKEKKFTFNNISQKNRNLLLWDKTLNVDGIKTGHTENAGYNIIASATKNNMRLIVVILGDKTEQYRKKNSKKLLNWGFETFRTINPIKKYQKIASIPILYGKQSYVRIGIKNNVFLTILKNQEKKIKILYHVKNNKIFAPIYRNQVLGHLTFMIHNHIVGHYPLIALENIPKGNIFIRLLDYIRLLLSKWIHQ
SIO_010081: GJU04_RS00360
subclass of: SO_0000673
so part of: GJU04_RS00360
location: 67289..68503
location: region:67289-68503:1
so has part: feature:67289-68503:1:exon

WP_168892933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67289-68503:1:exon

GJU04_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lipB
locus tag: GJU04_RS00365
old locus tag: GJU04_00365
so part of: sequence
location: 68535..69161
location: region:68535-69161:1
so has part: feature:68535-69161:1:exon
subclass of: SO_0000010

position:68535:1
position: 68535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69161:1
position: 69161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68535-69161:1:exon

GJU04_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lipB
locus tag: GJU04_RS00365
old locus tag: GJU04_00365
EC number: 2.3.1.181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874222.1
GO function: GO:0016979 - lipoate-protein ligase activity [Evidence IEA]
GO process: GO:0009107 - lipoate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoyl(octanoyl) transferase LipB
translation: MYKKNFIIRDLGIESWYITYKKMYNFNYIRSNNTLDEIWLVEHNPIFTQGKLSKVKDILFYNHKIPIFNTDRGGKITYHAPGQQILYILINLRKRKIKIKSLIFILEKTIINILLYFGIKPDYSFNHMPGVYVNNKKIASIGIKISKGFTSHGMSFNINMDLLPFNYINPCGLYKLQMTQVKDFIPYIKIMTIKKLLIKEFLFLINNI
SIO_010081: GJU04_RS00365
subclass of: SO_0000673
so part of: GJU04_RS00365
location: 68535..69161
location: region:68535-69161:1
so has part: feature:68535-69161:1:exon

WP_168892934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68535-69161:1:exon

GJU04_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lipA
locus tag: GJU04_RS00370
old locus tag: GJU04_00370
so part of: sequence
location: 69225..70112
location: region:69225-70112:1
so has part: feature:69225-70112:1:exon
subclass of: SO_0000010

position:69225:1
position: 69225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70112:1
position: 70112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69225-70112:1:exon

GJU04_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lipA
locus tag: GJU04_RS00370
old locus tag: GJU04_00370
EC number: 2.8.1.8
inference: COORDINATES: protein motif:HMM:TIGR00510.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009107 - lipoate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoyl synthase
translation: MNNLYNMKQKILKKPNWIKIRFSVKKINKIKKIKSILKNNGLYSVCEEASCPNLIECFGKGQLTFMILGNICTRNCPYCDVTHGRPKIKYDENEASNLAKIIFKMKLKYVVITSVNRDDLHDGGANQFINCIKKIREKNTNIKIEILVPDFKNCIEKALNILSYELPDVFNHNIETVERLYYKIRPAGKYQKSLILLKKFKNLFPHIMTKSGLMVGLGETKKELFNTIKDLKYNKVDILTIGQYLQPSKNHIPVYKYLNLNEFYQIKKEAEKIGFKKVICGPFIRSSYNAEKFFF
SIO_010081: GJU04_RS00370
subclass of: SO_0000673
so part of: GJU04_RS00370
location: 69225..70112
location: region:69225-70112:1
so has part: feature:69225-70112:1:exon

WP_281351277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69225-70112:1:exon

GJU04_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
alternative label: gicA
alternative label: msmC
gene: cspE
locus tag: GJU04_RS00375
old locus tag: GJU04_00375
gene synonym: gicA; msmC
so part of: sequence
location: complement(70304..70513)
location: region:70304-70513:-1
so has part: feature:70304-70513:-1:exon
subclass of: SO_0000010

position:70304:-1
position: 70304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70513:-1
position: 70513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70304-70513:-1:exon

GJU04_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
alternative label: gicA
alternative label: msmC
gene: cspE
locus tag: GJU04_RS00375
old locus tag: GJU04_00375
gene synonym: gicA; msmC
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription antiterminator/RNA stability regulator CspE
translation: MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSSGFKTLTEGQRVEFEITNGAKGPSAANVVAL
SIO_010081: GJU04_RS00375
subclass of: SO_0000673
so part of: GJU04_RS00375
location: complement(70304..70513)
location: region:70304-70513:-1
so has part: feature:70304-70513:-1:exon

WP_168820769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70304-70513:-1:exon

GJU04_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00380
old locus tag: GJU04_00380
so part of: sequence
location: 70717..71481
location: region:70717-71481:1
so has part: feature:70717-71481:1:exon
subclass of: SO_0000010

position:70717:1
position: 70717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71481:1
position: 71481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70717-71481:1:exon

GJU04_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00380
old locus tag: GJU04_00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010896033.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MDLLLGKKILITGILNKYSIAYGIACTMYKHKANLIFTYQNKKNKEKIKKLAGKMTKNPLIKCDVSKDTDLKYLFFKISQIWNKFDGFVHSIAFAPNNTLKGDFIKNTSRLTFQISHDISSYSLLGMVKESINILNEKSSIIVLTYLGSRIVINNYNIMGLAKSSLEANIRYIACNIGNKNIRINGISPAPLKTSASSQIKNISNIIKLYKKNSPLSEKITIKHIGNVATFLASDLSLGITGEIINLDSGFNIK
SIO_010081: GJU04_RS00380
subclass of: SO_0000673
so part of: GJU04_RS00380
location: 70717..71481
location: region:70717-71481:1
so has part: feature:70717-71481:1:exon

WP_168892936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70717-71481:1:exon

GJU04_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00385
old locus tag: GJU04_00385
so part of: sequence
location: 71591..73138
location: region:71591-73138:1
so has part: feature:71591-73138:1:exon
subclass of: SO_0000010

position:71591:1
position: 71591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73138:1
position: 73138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71591-73138:1:exon

GJU04_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00385
old locus tag: GJU04_00385
EC number: 1.6.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001219380.1
GO function: GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
GO process: GO:1902600 - proton transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
translation: MIIGIPKEKYFKEKRIAMTPLNIKKLIKLGFKVYVEKDAGILSYFQNQDFINAGAKIVENKKIWESNIIIKIHPLDIEETKLIKNNSILISFIWPNKNSILLNILVEKNITTIAMDTVPRISRAQSLDALSSMNNLSGYRSIIESINLLQRTPNGQITAAGKILPAKVMVIGAGVAGLSAIGTAKSLGAKVIAFDKRKEVKEQIHSMGAEFLELKEQQEDNDNEYKTLSSKKKLQLEKDYFTNIVKTTDIIITTAVILNKKAPILITKDMIKLMKPGSIIFDLAIENGGNCELTEINKIITTNNNIKILGCTNLPSKLAPQASQLYSTNIINLMNLLSKNNLGKISINLEDEIIRNMTIIYDKKIIWPAPKIILKKTKNDIEEKNNFEKNKNSVNIKKNTCFFKSNYFLYTIGLFCIYYITNFIPYEIIPHFIIFLLSCIIGYYVVWNVDHKLHTPLMSVTNAISGIIIIGSILQINSNYFTIIILSSLGTLLSSINIFGGLTITQRMLQMFRKN
SIO_010081: GJU04_RS00385
subclass of: SO_0000673
so part of: GJU04_RS00385
location: 71591..73138
location: region:71591-73138:1
so has part: feature:71591-73138:1:exon

WP_168892937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71591-73138:1:exon

GJU04_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00390
old locus tag: GJU04_00390
so part of: sequence
location: 73151..74557
location: region:73151-74557:1
so has part: feature:73151-74557:1:exon
subclass of: SO_0000010

position:73151:1
position: 73151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74557:1
position: 74557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73151-74557:1:exon

GJU04_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00390
old locus tag: GJU04_00390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008500543.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
translation: MFFDRSLIFIYTISAILFILSIASLSKKETSQRGNLLAINGMLIAIIITILKSPINNIGYVFGAIFLGAIIGISISKKIDMTKMPQLIAILHSFVGLTAILVGFNNYLSLIYNKNIFYKNIDIQLVEIFISIFIGSITLIGSIIAFNKLSGFIKSETLNIKHKNKIHILTLFTSFIFMIIFLKTHNIKLQITVLGLIFLISLIFGFHLIMSIGGADMPVVISMLNSYSGWAAASSGFMLTNDLLIITGALVGSSGAILSYLMCKGMNRSFINVLIGGNNKFSNQNKSILKNKDIKNYKKISIENTVDILKNSNSIIIVPGYGLAVSQAQYPLSEIVKKLLLLNITVRFAIHPVAGRLPGHMNVLLAEAHIPYDIVLEMDEINKDFINTDTVLVIGANDTVNPSAQEDINSPISGMPVLEVWKANNIIILKRSMSQGYSGINNPLFYRDNSYMLFGDAKDLINKILKII
SIO_010081: GJU04_RS00390
subclass of: SO_0000673
so part of: GJU04_RS00390
location: 73151..74557
location: region:73151-74557:1
so has part: feature:73151-74557:1:exon

WP_168892938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73151-74557:1:exon

GJU04_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00395
old locus tag: GJU04_00395
so part of: sequence
location: complement(74671..77154)
location: region:74671-77154:-1
so has part: feature:74671-77154:-1:exon
subclass of: SO_0000010

position:74671:-1
position: 74671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77154:-1
position: 77154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74671-77154:-1:exon

GJU04_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00395
old locus tag: GJU04_00395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499495.1
GO function: GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0006401 - RNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rne/Rng family ribonuclease
translation: MKRMLINATQHEELRVALVDGQKLYDLDIENSNYKQKKSNIYKGKITRIEPSLEAVFVDYGVDKHGFLPIKEITEEYLSNDNNKNLFNKLNLKNSLSIGKEIIVQISKEERGNKGASLTTFISLAGSYLVLMPNNPSANGISKKIEGENRRNLKKILSLLYLPNNMSLIIRTAGLGKDIETFKSDLKFRLKHWNMIKKIAKNKSAPFLIYQESNIIIRALRDYLYQDINEILIDNPKILKLAKKHINILGRSDLNHKIKLYTGTVPLFSHYQIESQIETAFQRKVRLSSGGSIIIDTTEALTSVDVNSSKATKGIDIEETALNINLEAADEIIRQLRLRDVGGLIVIDFIDMSLLENKKAVEKRLLNNIREDRAKIQINNISKFGLLEMSRQRLRSSLKESNYYLCPRCLGNGNLRDSRSLSLSILRLIEEESFKENTKEVYAIVPVKIASYLLNEKRNAVNAIENRKIRTFIIPNDKLNTPNYSIIRIKHGEDKKNVYFIIKKISKLNANIYNYHYFKNKFLHENIIDKNNKIKTLNIYNQTIMEKKKYPFYIINKLFNFLNRKKFYIKKIKNFFIQKIIFTNKIILNTFNKYFFNNKKYNFNKNINNISDKINLNTEKKLLIWDKKKIIPISKLKFIKNELKPVKLNNNLIFKNQKNYKNNFNYIKLKNFLKIKINQNYYFRKKKYSNTITSNSKISNNDKQTNISNISLEKRIEFNKFKNHIKINKIVLDKIKLHNKKKIMFKTTNIIISDFFYKNSSKIKNNNFITKKKLYRNYISSSEKKIQSNFTNCYNNKLINSSFNLNNKKGAGGHAAKRYATSPVKRP
SIO_010081: GJU04_RS00395
subclass of: SO_0000673
so part of: GJU04_RS00395
location: complement(74671..77154)
location: region:74671-77154:-1
so has part: feature:74671-77154:-1:exon

WP_168892939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74671-77154:-1:exon

GJU04_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00400
old locus tag: GJU04_00400
so part of: sequence
location: 77529..78482
location: region:77529-78482:1
so has part: feature:77529-78482:1:exon
subclass of: SO_0000010

position:77529:1
position: 77529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78482:1
position: 78482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77529-78482:1:exon

GJU04_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00400
old locus tag: GJU04_00400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672602.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MYKIIKNKIITIPSTIENQRVDNFLINKFKNVPKSRIYRMLRTGKIKVNKKKILPNFKIKSQDIIKISFIYINKIKPIKNNIILSKIKFFKKMIIFEDEYMLAINKPSGIAVHGGSGINYGIIENFRYLFKKIKFLELVHRIDKETSGVLLIAKKRSILKILQQQLIEKKILKEYIALVKGNCFEKKDIYIKNFLVKNFLNKKIKVKIDHNKGKYSETKFKIIKNYKNFMLIKINPLTGRTHQIRVHMAYLNYPIINDQRYGDNSLNSKFRKNFNINRLFLHAKSLQLIHPKNNKEIKIYAPLSNELNNCLLNLEHY
SIO_010081: GJU04_RS00400
subclass of: SO_0000673
so part of: GJU04_RS00400
location: 77529..78482
location: region:77529-78482:1
so has part: feature:77529-78482:1:exon

WP_168892940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77529-78482:1:exon

GJU04_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmF
locus tag: GJU04_RS00405
old locus tag: GJU04_00405
so part of: sequence
location: 78591..78773
location: region:78591-78773:1
so has part: feature:78591-78773:1:exon
subclass of: SO_0000010

position:78591:1
position: 78591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78773:1
position: 78773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78591-78773:1:exon

GJU04_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmF
locus tag: GJU04_RS00405
old locus tag: GJU04_00405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069893.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L32
translation: MAVQKHKKSRSKRGMRRSHNKLSNNKFLLINKKTGKKYLFHHMTDDGFYKGIQIINKNNK
SIO_010081: GJU04_RS00405
subclass of: SO_0000673
so part of: GJU04_RS00405
location: 78591..78773
location: region:78591-78773:1
so has part: feature:78591-78773:1:exon

WP_168892941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78591-78773:1:exon

GJU04_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00410
old locus tag: GJU04_00410
so part of: sequence
location: 78815..79261
location: region:78815-79261:1
so has part: feature:78815-79261:1:exon
subclass of: SO_0000010

position:78815:1
position: 78815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79261:1
position: 79261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78815-79261:1:exon

GJU04_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00410
old locus tag: GJU04_00410
EC number: 2.3.1.39
inference: COORDINATES: protein motif:HMM:NF012901.2
GO function: GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACP S-malonyltransferase
translation: MKKFAAIFPGQGTQFIKMIYSLYIKYKIIRDTFNSASEVLQYDLWNIIKNGPLKKLNITYYTQPAILTTSIAIYRLWLQKNNIIPNIVTGYSLGEYTAMVCSDIISFIDAIKIVKYRGKLMHQISSNLNDFNINGYYMQTIIGLKKKK
SIO_010081: GJU04_RS00410
subclass of: SO_0000673
so part of: GJU04_RS00410
location: 78815..79261
location: region:78815-79261:1
so has part: feature:78815-79261:1:exon

WP_168892942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78815-79261:1:exon

GJU04_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00415
old locus tag: GJU04_00415
so part of: sequence
location: 79444..79776
location: region:79444-79776:1
so has part: feature:79444-79776:1:exon
subclass of: SO_0000010

position:79444:1
position: 79444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79776:1
position: 79776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79444-79776:1:exon

GJU04_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00415
old locus tag: GJU04_00415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPIAYKFKKFLDKIIINKPKIKFINNVNCKYEKSPKKIKKNLVKQLYSTVNWVGCIKYIEQHNIFNVIEFTPKNMLKKISKKITNNICINSIYNLKTFLLTSEKYKICN
SIO_010081: GJU04_RS00415
subclass of: SO_0000673
so part of: GJU04_RS00415
location: 79444..79776
location: region:79444-79776:1
so has part: feature:79444-79776:1:exon

WP_168892943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79444-79776:1:exon

GJU04_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: fabG
locus tag: GJU04_RS00420
old locus tag: GJU04_00420
so part of: sequence
location: 79781..80533
location: region:79781-80533:1
so has part: feature:79781-80533:1:exon
subclass of: SO_0000010

position:79781:1
position: 79781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80533:1
position: 80533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79781-80533:1:exon

GJU04_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: fabG
locus tag: GJU04_RS00420
old locus tag: GJU04_00420
EC number: 1.1.1.100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001482697.1
GO function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoacyl-[acyl-carrier-protein] reductase
translation: MLKNFNLKNKIALVTGANKGIGYSIANTFIKYGVYVIGTSTNIYGIKKINNYLGKNGVGLILDLKNKSPYIINNLIRYIIKNFKTLDILVNNAGIIYDKLVLNMKDYQWDNVLQINLTSIFRICREVIYYMIKRSFGRIINISSIVGITGNIGQANYAASKSGIIGFSKSLAKEVASKGITVNVISPGYIKTDMTSHLKKKNYDNIISQIPSKRFGYPQEIADAVIFLASDKASYITGETLNINGGLYMG
SIO_010081: GJU04_RS00420
subclass of: SO_0000673
so part of: GJU04_RS00420
location: 79781..80533
location: region:79781-80533:1
so has part: feature:79781-80533:1:exon

WP_168892944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79781-80533:1:exon

GJU04_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: acpP
locus tag: GJU04_RS00425
old locus tag: GJU04_00425
so part of: sequence
location: 80596..80835
location: region:80596-80835:1
so has part: feature:80596-80835:1:exon
subclass of: SO_0000010

position:80596:1
position: 80596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80835:1
position: 80835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80596-80835:1:exon

GJU04_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: acpP
locus tag: GJU04_RS00425
old locus tag: GJU04_00425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl carrier protein
translation: MSNSITKRVKKIIIDQLGIKKEDITNSSSFKEDLGADSLDTIEIIMALEEEFNIEILDEDAEKITSIQEAINYINNYKN
SIO_010081: GJU04_RS00425
subclass of: SO_0000673
so part of: GJU04_RS00425
location: 80596..80835
location: region:80596-80835:1
so has part: feature:80596-80835:1:exon

WP_168892945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80596-80835:1:exon

GJU04_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: fabF
locus tag: GJU04_RS00430
old locus tag: GJU04_00430
so part of: sequence
location: 80942..82183
location: region:80942-82183:1
so has part: feature:80942-82183:1:exon
subclass of: SO_0000010

position:80942:1
position: 80942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82183:1
position: 82183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80942-82183:1:exon

GJU04_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: fabF
locus tag: GJU04_RS00430
old locus tag: GJU04_00430
EC number: 2.3.1.179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004169479.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase II
translation: MKRRRVVITGIGMISPIGNTIESNWYNLINGNSGIDIINHFNTDQYKTKIAGLIKNFKYKNHFFNRKKKNIDLFIQYGLIACHEAINNSGLILNKYDNPRFGIAIGSGLGGMNLIEKNTQILNKKGPKKITPFLMTSTLINMLTGNIAINYKLTGPSLTISTACSSGINNIGIAFKIISYNDADVMITGASEKAVTPLSLSGFSSMNALSRRNHQPQQASRPWDRDRDGFVLGDGAGILILEEYTHAKKRNANIFAELVGFGMSNDSYHITSPPINGKGAQLAMFNALRDANLNPENIKYINAHSTSTKIGDIAEVNAIKKIFKNNYYKLFVSSTKSITGHLLGAAGAIESIYSILSLKNQIVPPTINLDNPDKNLDLDFIPKISRDVKNMKYVLCNSFGFGGSNATLIFKKI
SIO_010081: GJU04_RS00430
subclass of: SO_0000673
so part of: GJU04_RS00430
location: 80942..82183
location: region:80942-82183:1
so has part: feature:80942-82183:1:exon

WP_168893272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80942-82183:1:exon

GJU04_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tmk
locus tag: GJU04_RS00435
old locus tag: GJU04_00435
so part of: sequence
location: 82266..82886
location: region:82266-82886:1
so has part: feature:82266-82886:1:exon
subclass of: SO_0000010

position:82266:1
position: 82266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82886:1
position: 82886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82266-82886:1:exon

GJU04_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tmk
locus tag: GJU04_RS00435
old locus tag: GJU04_00435
EC number: 2.7.4.9
inference: COORDINATES: protein motif:HMM:NF013843.2
GO function: GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTMP kinase
translation: MNKKKFIVIEGINGAGKTTICNYIIKLLKNFNIKNIIKTHEPGGTPIAEKLRKIIKFSQGEKISYKTELLLIYAARLQLLDNIIRKNININWILSDRYDLSTYAYQIGGRNINKKNILFLQNFIKNNIKPDIIIYLDVNPVIALQRINNKNYDRIEKESINFFSRVRKYYLRIAKKNKTIKIVDANNKLKNVKSSVKKIINKLILV
SIO_010081: GJU04_RS00435
subclass of: SO_0000673
so part of: GJU04_RS00435
location: 82266..82886
location: region:82266-82886:1
so has part: feature:82266-82886:1:exon

WP_168892946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82266-82886:1:exon

GJU04_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00440
old locus tag: GJU04_00440
so part of: sequence
location: 82888..83910
location: region:82888-83910:1
so has part: feature:82888-83910:1:exon
subclass of: SO_0000010

position:82888:1
position: 82888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83910:1
position: 83910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82888-83910:1:exon

GJU04_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00440
old locus tag: GJU04_00440
inference: COORDINATES: protein motif:HMM:NF024575.2
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta' C-terminal domain-containing protein
translation: MKKYPILPWYPWLNFFYKKIIYQFLNKKNYKAYIFCSLNELGTNNLIYALTKWIFCINKKKLYSCSKCQNCILIENHIHPDLHIIKNNKEKNSISIEIIRNLTEIIYQSSYKDMGKIIWFPYAKQLNISSSNALLKILEEPSNNIWFFIQCTHKNELLPTIYSRCQFWNIYPPNEKIGTLWLKKKIKNYKIFKKKSLKTALRLCNYSPIKAYQLLNNVIWKSRNTFYTILVSSLEEDIMKLLSILNSKNILLYLNWIYLILLDVIKIHLNIDKKFLYNLDHIYLIYKISNLIIVDKILLMVKKILFYNNLLIKINNINHELVLINLLLSLEEIYKSNNKY
SIO_010081: GJU04_RS00440
subclass of: SO_0000673
so part of: GJU04_RS00440
location: 82888..83910
location: region:82888-83910:1
so has part: feature:82888-83910:1:exon

WP_168892947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82888-83910:1:exon

GJU04_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ptsG
locus tag: GJU04_RS00445
old locus tag: GJU04_00445
so part of: sequence
location: 83949..85406
location: region:83949-85406:1
so has part: feature:83949-85406:1:exon
subclass of: SO_0000010

position:83949:1
position: 83949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85406:1
position: 85406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83949-85406:1:exon

GJU04_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ptsG
locus tag: GJU04_RS00445
old locus tag: GJU04_00445
EC number: 2.7.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015700554.1
GO function: GO:0005355 - glucose transmembrane transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:1904659 - glucose transmembrane transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS glucose transporter subunit IIBC
translation: MFSNIFANMQKIGKSLMLPVSVLPIAGILLGIGSAHFYWLPNVISNIMEKTGSSVFANMPLIFSIGISLGFTKNNGVSALASVVSYGILTKTIEVMIPILLHNNYTQEIVIQKHLADTGVLGGIIAGSIAAYMFNRFHNIKLVDYLGFFSGSRFIPIISGLTSIFIGLLLSFIWIPIGKIIQSFSYWAAYQNPIVAFGIYGIIERTLLPFGLHHIWNVPFQMEIGSFMNIFTKQIYHGDIARYIAGDPSAGKLAGGFLFKMYGLPGAAIAIWQTSKKENKKKIGSLMFSAALTSFFTGITEPIEFSFMYAAPLLYIIHIILSGLSFPICILLGMRNGTSFSHGLIDFIILSGNGSKIWLFPIIGFIYIIIYYNVFKILIIKLDLRTPGREKIQNNIYKTNDISLNYGEKLVKAFGGKNNITNLDACITRLRITVINIKKVNEKELKLLGASAVIISGNGVQAIFGTKSDNLKTEMDNFIKKNNYE
SIO_010081: GJU04_RS00445
subclass of: SO_0000673
so part of: GJU04_RS00445
location: 83949..85406
location: region:83949-85406:1
so has part: feature:83949-85406:1:exon

WP_168892948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83949-85406:1:exon

GJU04_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00450
old locus tag: GJU04_00450
so part of: sequence
location: 85399..85749
location: region:85399-85749:1
so has part: feature:85399-85749:1:exon
subclass of: SO_0000010

position:85399:1
position: 85399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85749:1
position: 85749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85399-85749:1:exon

GJU04_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00450
old locus tag: GJU04_00450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053866.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HIT domain-containing protein
translation: MNNKKNIFQQIISKKIITNIVYQDNLVTAFNDIKPQSPIHILIIPNIFIKTLNNIKSEHQLLLGRMLLVASKIAKKKKIDKSGYRVVINCNHHGCQTIFYLHMHLLGGRQGINIFF
SIO_010081: GJU04_RS00450
subclass of: SO_0000673
so part of: GJU04_RS00450
location: 85399..85749
location: region:85399-85749:1
so has part: feature:85399-85749:1:exon

WP_168892949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85399-85749:1:exon

GJU04_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: gap
locus tag: GJU04_RS00455
old locus tag: GJU04_00455
so part of: sequence
location: complement(85845..86843)
location: region:85845-86843:-1
so has part: feature:85845-86843:-1:exon
subclass of: SO_0000010

position:85845:-1
position: 85845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86843:-1
position: 86843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85845-86843:-1:exon

GJU04_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: gap
locus tag: GJU04_RS00455
old locus tag: GJU04_00455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I glyceraldehyde-3-phosphate dehydrogenase
translation: MSIRVAINGFGRIGRIFFRVAQKNPKIKIIAINDLLEINYMAYMIKYDSTHGNFKKKIKVDENNLIINKNIIHVFSESDPLKLKWHDLNIDVVIESTGIFLTKELAKKHIIAGAKKVIITAPPKDNSIPMFVKGVNFNNYSGENIISNASCTTNCLAPLAKIINDNYIIKNGLMTTIHAVTSTQKTVDGPSMKDWRGGRGAYQNIIPSSTGAAKAVGIVLPELNNKLTGISLRVPVANVSVVDFTVQILKKTTLPDICKVIKFASQNYMKEIIGYTEDDVVSSDFNGSTLISIFDKKASIAIDNNFFKLIAWYDNETGYSSKILDLILHIFK
SIO_010081: GJU04_RS00455
subclass of: SO_0000673
so part of: GJU04_RS00455
location: complement(85845..86843)
location: region:85845-86843:-1
so has part: feature:85845-86843:-1:exon

WP_168892950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85845-86843:-1:exon

GJU04_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: sppA
locus tag: GJU04_RS00460
old locus tag: GJU04_00460
so part of: sequence
location: complement(86898..88715)
location: region:86898-88715:-1
so has part: feature:86898-88715:-1:exon
subclass of: SO_0000010

position:86898:-1
position: 86898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88715:-1
position: 88715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86898-88715:-1:exon

GJU04_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: sppA
locus tag: GJU04_RS00460
old locus tag: GJU04_00460
inference: COORDINATES: protein motif:HMM:TIGR00705.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptide peptidase SppA
translation: MIKLLNIIKFFCCYLWSLINFTRTLIINIIFILLIFLLCYYIYNVNHRKNTNSQILKKNNQVLEISFDENFDNESFYKNNLIFKLFNKFTNKKNNDPIINIVNAINFAKKDKNINGIILRLNNLNISDIPNLRYIGKYLNDFKESGKKIYAISDMYDQSQYYLASFANKVFLLPYGNVKLYGLNFKKFFIKNFLKNLKIKTHVFRVGKYKSAVESVLREDMSNNDKIVMNQLINNLWDDYLTTISINRQLTKEEIFPTDENLLISLKKSHGNLALFALQNKLVDKISNNNDFEKEMIQNFGLDKTQNTYNKISINNYIKLYIDNGIQQNNGNIAVITIDGIMIYGKNGSDLIVNKINEIYKNPNIKGLILKINSPGGDILAAKAIYNELLLLKKIHKPIVVVMGKMAASGAYWISTVADFIIADPVSLTGSIGIFSVVYNISDILDLIGIKKDGVNISDRFTLSMDEKLSSIEEKIMSINIKTGYDEFIYLVSKKRNLSIEKVKKIANGMVLLGKDAQKYGLVDGLGDFDSAIMKIAKLTKIKKVKLQWITINTFSPLDYFIKSNNFIISNLIQNYINFIFNKNFSSLNNENILNPERIYSLYII
SIO_010081: GJU04_RS00460
subclass of: SO_0000673
so part of: GJU04_RS00460
location: complement(86898..88715)
location: region:86898-88715:-1
so has part: feature:86898-88715:-1:exon

WP_168892951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86898-88715:-1:exon

GJU04_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: xthA
locus tag: GJU04_RS00465
old locus tag: GJU04_00465
so part of: sequence
location: complement(88747..89556)
location: region:88747-89556:-1
so has part: feature:88747-89556:-1:exon
subclass of: SO_0000010

position:88747:-1
position: 88747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89556:-1
position: 89556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88747-89556:-1:exon

GJU04_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: xthA
locus tag: GJU04_RS00465
old locus tag: GJU04_00465
EC number: 3.1.11.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002951098.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease III
translation: MKIFSFNINGIRAHIHQLKIIIKIYNPDIIGLQETKVNNENFPKEEIYKLGYHIYMCGQVKNYGVALLSKKEPLNIQKNFLKDFFNNQKRSIMIDLDSAIGKIKILNCYFPQGDNQKNNIKFKYKINFLKNLYFYIKENLDPKNHIILMGDINISISDLDIGIGEKNRKKWLKKGKCSFLPKERFYMNQLLDWGLFDIWRLMNPLTNNKFSWFDYRSKGFVFNKGLRIDNILITNSLIKYYSNSGIEYSIRNLIKPSDHAPIWVKFKNI
SIO_010081: GJU04_RS00465
subclass of: SO_0000673
so part of: GJU04_RS00465
location: complement(88747..89556)
location: region:88747-89556:-1
so has part: feature:88747-89556:-1:exon

WP_168892952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88747-89556:-1:exon

GJU04_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: cls
locus tag: GJU04_RS00470
old locus tag: GJU04_00470
so part of: sequence
location: complement(89624..91090)
location: region:89624-91090:-1
so has part: feature:89624-91090:-1:exon
subclass of: SO_0000010

position:89624:-1
position: 89624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91090:-1
position: 91090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89624-91090:-1:exon

GJU04_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: cls
locus tag: GJU04_RS00470
old locus tag: GJU04_00470
inference: COORDINATES: protein motif:HMM:TIGR04265.1
GO function: GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO process: GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cardiolipin synthase
translation: MINILNLILLYSNIILLIFIIIRIFIKYKDIKSYILWYLILYVFPKIGIIFYFIFGEIYSKTQYKSKQAKKIWFRYSELLKKLQIYYKLYIKNIYVNKKIETLFQLCENKQNLLSMTNNSIKLFNSSFKLFTSLINDIQSAKYSIHIVFYIWIPGGLVNKFSESIIIAAKRGVKCYIMLDFIGSKNFFYSSWYHLMLRVGVFIIKSLNITIFNFFYSRIDLRQHKKIILIDNRIVYVGSMNMVDSTNFKKNTKIGKWIDLMIRITGPIVNTISIIYSYDWEIETGQNILSINQLKNNLVKYQNKNNINRIQVIFSGLKLSKKIIHNSLITAIFLAKKSLIITTPYLIPSKNLLSAICIASERGVDVKIIIPKYNDSIFIYWASKFFFYKLLKSGVNIYQLKTGFLHTKSIIIDKKISFIGTVNLDIRSIYLNFEINLIIDDIIFNKSLLYIQNKYILKSQKLEYNLWIKRPYWQKIIEKLFFLFKFIL
SIO_010081: GJU04_RS00470
subclass of: SO_0000673
so part of: GJU04_RS00470
location: complement(89624..91090)
location: region:89624-91090:-1
so has part: feature:89624-91090:-1:exon

WP_168892953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89624-91090:-1:exon

GJU04_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ychF
locus tag: GJU04_RS00475
old locus tag: GJU04_00475
so part of: sequence
location: complement(91177..92205)
location: region:91177-92205:-1
so has part: feature:91177-92205:-1:exon
subclass of: SO_0000010

position:91177:-1
position: 91177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92205:-1
position: 92205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91177-92205:-1:exon

GJU04_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ychF
locus tag: GJU04_RS00475
old locus tag: GJU04_00475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874148.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redox-regulated ATPase YchF
translation: MELKCGIIGLPNVGKSTLFNALTNSNVDALNYPFCTIKPNTSIVTVPDNRLLYLSKLIKSKKIIQSTVTFVDIAGLIKGASKGEGLGNQFLHNISEVDAIIHVIRCFKNKNILSLSFNPIKDVDIINNEIINFDINLLFKLKNNKKHINNKFKYLLDICLNYLKNGKLLNLLKLNIEEIDFLKKLKLLTIKPIIIIANIDENNINNQFFLDEINILSKNYLVLKICIINLNNKQKILPINKNNDLKKIILNSFKLLNLHTFYTVGIKETRSWSILKGTTALIAAKKIHSDIQKGFIRAQVIHYKDFIFYKNQTKAKLFGKMKIEGKKYIIQDGDVINFLFQI
SIO_010081: GJU04_RS00475
subclass of: SO_0000673
so part of: GJU04_RS00475
location: complement(91177..92205)
location: region:91177-92205:-1
so has part: feature:91177-92205:-1:exon

WP_168892954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91177-92205:-1:exon

GJU04_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: pth
locus tag: GJU04_RS00480
old locus tag: GJU04_00480
so part of: sequence
location: complement(92205..92804)
location: region:92205-92804:-1
so has part: feature:92205-92804:-1:exon
subclass of: SO_0000010

position:92804:-1
position: 92804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92205-92804:-1:exon

GJU04_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: pth
locus tag: GJU04_RS00480
old locus tag: GJU04_00480
EC number: 3.1.1.29
inference: COORDINATES: protein motif:HMM:NF013368.2
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-tRNA hydrolase
translation: MNNIKMIVGLGNNLNNKFIKTRHNMGSNYIINLSNKFNIQFKKIKKLNENIGYLNILNKKIILLIPNSLMNNSGKSIFIVSSFYKILLKNILVIHDELDYLPGIIKFKYGGGSGGHNGINNIIKIFNDKLFYRLRIGIGHPGCKDQVNNFVLTPPTLTEQKNINLTIKNSIKALLVFIKTNNYNKAINYLHSKNNRIIK
SIO_010081: GJU04_RS00480
subclass of: SO_0000673
so part of: GJU04_RS00480
location: complement(92205..92804)
location: region:92205-92804:-1
so has part: feature:92205-92804:-1:exon

WP_168892955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92205-92804:-1:exon

GJU04_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00485
old locus tag: GJU04_00485
so part of: sequence
location: complement(92830..93777)
location: region:92830-93777:-1
so has part: feature:92830-93777:-1:exon
subclass of: SO_0000010

position:92830:-1
position: 92830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93777:-1
position: 93777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92830-93777:-1:exon

GJU04_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00485
old locus tag: GJU04_00485
EC number: 2.7.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO process: GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IEA]; GO:0009165 - nucleotide biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-phosphate pyrophosphokinase
translation: MTNMKLFAGNAITKLAKNIANHLYINLGKIFVGKFSDGEVSVKIKENVRGNDIFIIQSTCNPTNDNLIELIIMIDAFKRASAGRITAVIPYFGYARQDRRIRSARVPITAKVIADFLSRVGINRILTVDLHAEQIQGFFNVPVDNVFASSIFLKDISKNIYNNPIIVSPDIGGVIRARSIAKKLFNGTDMAIIDKRRNNLNTTEIMNIIGDVNQRDCILIDDIVDTAGTLCQAAKALKKNGATKVFVYVTHAIFSGNAIQNIYNSVIDEIIVCDSIPLTKKIKKLKNVRVLTLSYMLAETIRRISNEESISVMFK
SIO_010081: GJU04_RS00485
subclass of: SO_0000673
so part of: GJU04_RS00485
location: complement(92830..93777)
location: region:92830-93777:-1
so has part: feature:92830-93777:-1:exon

WP_168892956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92830-93777:-1:exon

GJU04_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: prfA
locus tag: GJU04_RS00490
old locus tag: GJU04_00490
so part of: sequence
location: 93990..95063
location: region:93990-95063:1
so has part: feature:93990-95063:1:exon
subclass of: SO_0000010

position:93990:1
position: 93990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95063:1
position: 95063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93990-95063:1:exon

GJU04_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: prfA
locus tag: GJU04_RS00490
old locus tag: GJU04_00490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005161322.1
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 1
translation: MNSSILKKLNILYKRYNYILKKLSDYKSYNNHVSLRNLSTEYSKLSNIIKPFIKWKKLELNLLNNKILLKEKDKEIYLMVLEDIKNIKIKQKKIEKILYKLLSPQNKEEDNRNCFLEIKAGAGGHEAAIFVKNISRMYIRYAESKKWKIEIIHIHYNDNSNGFKEIILKIIGIGVYGKLKFESGGHRVQRIPETESQGRIHTSTCIIAVMPELLKTEIPEINNQDLKIDTFRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKALAVLATRIYTLEMAKKNKDNAIKKKILLGTGDRSDRNRTYNFIQKRVTDHRINLTLYKLNEIMDGNLDILIKPIIHQYNADKL
SIO_010081: GJU04_RS00490
subclass of: SO_0000673
so part of: GJU04_RS00490
location: 93990..95063
location: region:93990-95063:1
so has part: feature:93990-95063:1:exon

WP_168892957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93990-95063:1:exon

GJU04_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: prmC
locus tag: GJU04_RS00495
old locus tag: GJU04_00495
so part of: sequence
location: 95079..95915
location: region:95079-95915:1
so has part: feature:95079-95915:1:exon
subclass of: SO_0000010

position:95079:1
position: 95079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95915:1
position: 95915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95079-95915:1:exon

GJU04_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: prmC
locus tag: GJU04_RS00495
old locus tag: GJU04_00495
EC number: 2.1.1.297
inference: COORDINATES: protein motif:HMM:TIGR00536.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor N(5)-glutamine methyltransferase
translation: MIINQWLKYASNLLKQNKILTYQLESVILLSFVLKKSKSWIYGFNETKINLKQFKILQNFLKRRITGEPIAYLLGFCEFWSLKIYVSPYVLIPRKDTEILVNVVLKKINNNIEKILDLGTGSGAIALAIASKYNFLKITAVDISQQIINLAKYNAKKLYIKNINFLISNWFSNLKNNKFDIIISNPPYISDYEYHKLKKELKFEPIKSLISLNNGLSDLRYIISKSSEYLNNYGWLILEHGYKQGYILKKILKIENFKNISQYCDIQGYYRVICGQKI
SIO_010081: GJU04_RS00495
subclass of: SO_0000673
so part of: GJU04_RS00495
location: 95079..95915
location: region:95079-95915:1
so has part: feature:95079-95915:1:exon

WP_168892958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95079-95915:1:exon

GJU04_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: thrS
locus tag: GJU04_RS00500
old locus tag: GJU04_00500
so part of: sequence
location: 95989..97245
location: region:95989-97245:1
so has part: feature:95989-97245:1:exon
subclass of: SO_0000010

position:95989:1
position: 95989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97245:1
position: 97245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95989-97245:1:exon

GJU04_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: thrS
locus tag: GJU04_RS00500
old locus tag: GJU04_00500
EC number: 6.1.1.3
inference: COORDINATES: protein motif:HMM:TIGR00418.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine--tRNA ligase
translation: MAQNDNFKKIDLSNKLLEIDHRIIGKKLNLYHFQNESPGMVFWHNNGYIIFKQLEKLLRRKLNQYNYLEVKTPLITDFAIWKKTGHWKIYKESIFTTFSENRNYCIKPMNCPAHIQIFQQKLKSYRDLPLRIAEFGICHRNEPSGSLHGLMRLRNFTQDDAHIFCRKNQVVKEIENCIHMMYDIYHLFGFKKFLVKLSTRPPNKIGDNKIWDQAENNLSSILNKLNINFEYQIGEGAFYGPKIEFSFFDCLNREWQCGTIQLDFTLPKCLNLFYINNKNKHSTPIIIHRAILGSLERFIGIILEEFSGYLPIWVAPIQIIILSISEKHIKYVLKLFKIIKENNIRVKYDINNEKISFKIRKYAIQHIPYILICGDKEVKNNLISIRDCFGKNLGFMKIHDIINRIVNEIKNYYINKKK
SIO_010081: GJU04_RS00500
subclass of: SO_0000673
so part of: GJU04_RS00500
location: 95989..97245
location: region:95989-97245:1
so has part: feature:95989-97245:1:exon

WP_168892959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95989-97245:1:exon

GJU04_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: infC
locus tag: GJU04_RS00505
old locus tag: GJU04_00505
so part of: sequence
location: 97258..97797
location: region:97258-97797:1
so has part: feature:97258-97797:1:exon
subclass of: SO_0000010

position:97258:1
position: 97258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97797:1
position: 97797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97258-97797:1:exon

GJU04_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: infC
locus tag: GJU04_RS00505
old locus tag: GJU04_00505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091255.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MKIGKKTIQFSRPNKINQNIRSKIVRLIGLNGDQIGIISLKEALIKAENTGFDLVEISPNSEPPVCRIMDYGKFLYTKNKASKEQKKKQKIIHLKEIKFRPGTDIGDYKVKLRNLIRFLKKGDKIKVTLRFRGREMMHTKLGFSMLNRIKNDLAKFAIVESFPSKVESRQIIMILIPKK
SIO_010081: GJU04_RS00505
subclass of: SO_0000673
so part of: GJU04_RS00505
location: 97258..97797
location: region:97258-97797:1
so has part: feature:97258-97797:1:exon

WP_168893273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97258-97797:1:exon

GJU04_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmI
locus tag: GJU04_RS00510
old locus tag: GJU04_00510
so part of: sequence
location: 97824..98021
location: region:97824-98021:1
so has part: feature:97824-98021:1:exon
subclass of: SO_0000010

position:97824:1
position: 97824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98021:1
position: 98021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97824-98021:1:exon

GJU04_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmI
locus tag: GJU04_RS00510
old locus tag: GJU04_00510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MSKLKTVRSAAKRFKKTGTGLFKHKQANSRHLLTKKNKKKKRFLRQKKIVKKGDSYSLKICLPYL
SIO_010081: GJU04_RS00510
subclass of: SO_0000673
so part of: GJU04_RS00510
location: 97824..98021
location: region:97824-98021:1
so has part: feature:97824-98021:1:exon

WP_168892960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97824-98021:1:exon

GJU04_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplT
locus tag: GJU04_RS00515
old locus tag: GJU04_00515
so part of: sequence
location: 98071..98418
location: region:98071-98418:1
so has part: feature:98071-98418:1:exon
subclass of: SO_0000010

position:98071:1
position: 98071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98418:1
position: 98418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98071-98418:1:exon

GJU04_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplT
locus tag: GJU04_RS00515
old locus tag: GJU04_00515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672477.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MVRIKRGVTAKARHKKIIKQAKGYYGARSRTYRSAFQAVIKSGQYAYRDRKQKKRKFRQLWIMKINAAARQKNISYNYLIYKLKKNNININRKMLANMAMFDNLSFNKLINFSNN
SIO_010081: GJU04_RS00515
subclass of: SO_0000673
so part of: GJU04_RS00515
location: 98071..98418
location: region:98071-98418:1
so has part: feature:98071-98418:1:exon

WP_168892961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98071-98418:1:exon

GJU04_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: pheS
locus tag: GJU04_RS00520
old locus tag: GJU04_00520
so part of: sequence
location: 98516..99511
location: region:98516-99511:1
so has part: feature:98516-99511:1:exon
subclass of: SO_0000010

position:98516:1
position: 98516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99511:1
position: 99511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98516-99511:1:exon

GJU04_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: pheS
locus tag: GJU04_RS00520
old locus tag: GJU04_00520
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874085.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit alpha
translation: MISDDIVIIIKKEIYAVKDINELNILKIKYLGKKGYITKQFLLIKTLKKEEKINKCIILNKQKKKIKEIIKKRQKEIEIEKNNKKLLNQKVDISLPGKYIKIGSEHPIKNIINKIENFFIKIGFEIVVGPEIEDVYHNFDALNIPKYHPIRTEQDTFWLNKNILLRTQTSNIQIRIMKKSKPPIRILTSGKVYRNDYDRNHTPMFHQIEGLFIDKKVTFTDLKGILVLFLNFFFGKKCKIRFRPSYFPFTEPSLEVDILNQKKQWIEILGAGMVHPNVLKNVKINPSKYYGYAFGIGVERLAMLHYNIHDIRLFYENDIRFLKQFKFNNFI
SIO_010081: GJU04_RS00520
subclass of: SO_0000673
so part of: GJU04_RS00520
location: 98516..99511
location: region:98516-99511:1
so has part: feature:98516-99511:1:exon

WP_168893274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98516-99511:1:exon

GJU04_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: pheT
locus tag: GJU04_RS00525
old locus tag: GJU04_00525
so part of: sequence
location: 99508..101997
location: region:99508-101997:1
so has part: feature:99508-101997:1:exon
subclass of: SO_0000010

position:99508:1
position: 99508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101997:1
position: 101997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99508-101997:1:exon

GJU04_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: pheT
locus tag: GJU04_RS00525
old locus tag: GJU04_00525
EC number: 6.1.1.20
inference: COORDINATES: protein motif:HMM:TIGR00472.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit beta
translation: MIKFSESWLREWLIYDKDIYYLSKKITMLGFEIEKIEYFKKNTIFDNILVGEIIKYSLYKKKPKIYKLKILVNNTKLLKIFSDIDNLENKTKVILATKYSSLYNKYIKIPEYSFLLKSEGLLCSYKIINIYQNNFLKNNLIKLPNNSNNGENANKYLNLTEKILHINTPTNRPDCLSILGFTRDLSVLNKFFFFKKPYNNILSNNSKKYKINININSNINNILYQYNYCIIKNVNFKKKIPSFIKNRLFQAGIQIISKNPLLNIHNYIILELGYPIQFYDFSKIKGNIYIKNKKKNKYNFLNFENQNIKSIINDSLLIITDESKILSIPGITQNKDVIVKLATKDILIECLFINRKYLTSLFSKNNYSNNNSNIYNRYLDPLIQKEVMIRTVNLILEIFGGDRSKIYTININNMYNLQKIIKLSFENIYKILGFYILKKYIINILNKLGCIIIKKTNNNYIIKIPSWRNDINIEADLIEEIIRVYGYNKIPNKIEIYLIKKNILEKKIQSKNIKINLKKIKNILINKGYYEVINYSFINPVTQLILYPKIEQIKIINPLTTETSVMRNSLSYGLINNIIYNQNRQQKNLRFFEYGLCFFKNLKKKIGISQKLMLSGIINGNLYSDYWNEKNKLINFYDIKGDIEYIFNFLNKYNKIEFRQQYNENNTILHPYVSALIYINNINIGSVGMLHPKLINYFNLHYDTFFFEIFFEKIIINNVFYFQKITHLPINKRDISFSIKKNIYFIDILSVLKNLKLKEIIKINLIDIYQGNNIPIGYKNITLSLLIQNKYYTLNEQEINKIINKCILELTKKFQILLRDYIPDHHKKF
SIO_010081: GJU04_RS00525
subclass of: SO_0000673
so part of: GJU04_RS00525
location: 99508..101997
location: region:99508-101997:1
so has part: feature:99508-101997:1:exon

WP_168892962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99508-101997:1:exon

GJU04_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00530
old locus tag: GJU04_00530
so part of: sequence
location: 102105..102728
location: region:102105-102728:1
so has part: feature:102105-102728:1:exon
subclass of: SO_0000010

position:102105:1
position: 102105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102728:1
position: 102728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102105-102728:1:exon

GJU04_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00530
old locus tag: GJU04_00530
EC number: 2.5.1.9
inference: COORDINATES: protein motif:HMM:TIGR00187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: riboflavin synthase
translation: MFTGIIQSIGKIQKIILNKNLYYLYIKTNKNFTKNLKIGESISNNGCCLTIIKLCNNIIIFNIIKQTFNVTTFKKVKIGDYVNLEKPIKINNYFGGHIVLGHITDTAIITNIKNYTSSKILWIKPNNVLQMNYILEKGSICIDGVSLTIDKKLKNKFSVNIIPKTLSNTTLSSKNIYNYVNIETDIYVRSIIQTVKKLYNNNIEYFK
SIO_010081: GJU04_RS00530
subclass of: SO_0000673
so part of: GJU04_RS00530
location: 102105..102728
location: region:102105-102728:1
so has part: feature:102105-102728:1:exon

WP_168892963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102105-102728:1:exon

GJU04_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tyrS
locus tag: GJU04_RS00535
old locus tag: GJU04_00535
so part of: sequence
location: 102748..104031
location: region:102748-104031:1
so has part: feature:102748-104031:1:exon
subclass of: SO_0000010

position:102748:1
position: 102748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104031:1
position: 104031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102748-104031:1:exon

GJU04_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tyrS
locus tag: GJU04_RS00535
old locus tag: GJU04_00535
EC number: 6.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091250.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine--tRNA ligase
translation: MIKENRINILKKLEDRNIIYQVTNKNNLYKILNEKKISLYCGFDLTADSLHIGHLIQLITLKYFQELGHKPIILLGGATSLIGDPSFKLKKRKINIIDNINLWFKKISLQINNFLDFNCGENSAIIINNYEWFNKMNVLFFLKKIGKYFYINQMINKDSIKKRMINNNTEGISFTEFSYNLLQSYDFAYLNKNFNVILQIGGSDQWGNIVSGIDLIKKIYKKKVFGITTNLIIKDDGTKFGKTETETIWLDHQKTNTYKFFQFWLNIPDSIVFNFLNMFTHYTSEIIDNFNKKKNNVKKNSPQYLLAEYMTNLVHGKDNLIISKKITNLLFYKKVHNFSENDFLILSQNIENLYLEDKNFNLQTILILSKFASSKSKASILIKSNSIYINNENISDISFIFTKYHKKFDHFTLLRKGKKNFCLIYWK
SIO_010081: GJU04_RS00535
subclass of: SO_0000673
so part of: GJU04_RS00535
location: 102748..104031
location: region:102748-104031:1
so has part: feature:102748-104031:1:exon

WP_168892964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102748-104031:1:exon

GJU04_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00540
old locus tag: GJU04_00540
so part of: sequence
location: complement(104059..104131)
location: region:104059-104131:-1
so has part: feature:104059-104131:-1:exon
subclass of: SO_0000663

position:104059:-1
position: 104059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104131:-1
position: 104131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104059-104131:-1:exon

GJU04_RS00540
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00540
old locus tag: GJU04_00540
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(104096..104098),aa:Val,seq:gac)
SIO_010081: GJU04_RS00540
subclass of: SO_0000673
so part of: GJU04_RS00540
location: complement(104059..104131)
location: region:104059-104131:-1
so has part: feature:104059-104131:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104059-104131:-1:exon

GJU04_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00545
old locus tag: GJU04_00545
so part of: sequence
location: complement(104178..105521)
location: region:104178-105521:-1
so has part: feature:104178-105521:-1:exon
subclass of: SO_0000010

position:104178:-1
position: 104178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105521:-1
position: 105521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104178-105521:-1:exon

GJU04_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00545
old locus tag: GJU04_00545
inference: COORDINATES: protein motif:HMM:TIGR00797.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MRKYLIEIKKLFNIAIPIILTQIAYILISIINMMMSNSFNKIDIAVLSIGISIWLPIILFGHGIFLSLIPIITKLYISHNYKKIVNYIKQSYLLAIIFSFIMIFILSKIDYLILLLFHDKIFIFKIEKFLKIIIWSIPGYLLLQILRCLCISFSLIIPDMIISWIGVILYIPINYILIYGFSYIPPLGVLGCSFSIVLIYWILFIITMIWISKSIYFKKIIFLNFSKNLDLKILKKIIKLGLPIGLSIFFEITLFSIVSLLISLFMGIDDVISHQIAINFSSLIFIIPLSLSIATTILIGVYLGLGHKKKAKIISWISQIIGVIISIFTILISIFFRKKIAKLYNSNKNIINLSSHLILLASFYQFLDSIQIIGSGILKGYKDTKSIFFITFISYWIISLPIGYILSVTSLITSKPMGPSGFWIGFIIGLIISVILILLRIIKIQKN
SIO_010081: GJU04_RS00545
subclass of: SO_0000673
so part of: GJU04_RS00545
location: complement(104178..105521)
location: region:104178-105521:-1
so has part: feature:104178-105521:-1:exon

WP_168892965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104178-105521:-1:exon

GJU04_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: grxD
locus tag: GJU04_RS00550
old locus tag: GJU04_00550
so part of: sequence
location: 105669..105980
location: region:105669-105980:1
so has part: feature:105669-105980:1:exon
subclass of: SO_0000010

position:105669:1
position: 105669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105980:1
position: 105980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105669-105980:1:exon

GJU04_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: grxD
locus tag: GJU04_RS00550
old locus tag: GJU04_00550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874144.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Grx4 family monothiol glutaredoxin
translation: MKIFNKIKKQINNNPIILYMKGNPIHPQCGFSDKAVKIISFYKIKFTYIDVLKYPDIRKYLPKYANWPTFPQLWVDNKLIGGYDILYTLHSNNELKDILNFKK
SIO_010081: GJU04_RS00550
subclass of: SO_0000673
so part of: GJU04_RS00550
location: 105669..105980
location: region:105669-105980:1
so has part: feature:105669-105980:1:exon

WP_168892966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105669-105980:1:exon

GJU04_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rnt
locus tag: GJU04_RS00555
old locus tag: GJU04_00555
so part of: sequence
location: complement(106000..106641)
location: region:106000-106641:-1
so has part: feature:106000-106641:-1:exon
subclass of: SO_0000010

position:106000:-1
position: 106000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106641:-1
position: 106641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106000-106641:-1:exon

GJU04_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rnt
locus tag: GJU04_RS00555
old locus tag: GJU04_00555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005286155.1
GO function: GO:0016896 - exoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO process: GO:0006364 - rRNA processing [Evidence IEA]; GO:0042780 - tRNA 3'-end processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease T
translation: MNNLSKLDLLSYRFRGFYPVVIDIETSGFNSKSNAILEISLITLKMHNGWLETNETLHFHILPFKGSNISPEALAFNGININTSLRGAITEKKALKKIFKKISQDIKINKCKKAVIVAHNAIFDHSFIMEAVKRTKLENDNPFHPFVIFDTTSMCGLILGQTVLAKSCHAIGIPFDNNQAHSALYDTNRTAKLFCRLVNKWKKKGGWPPSFFS
SIO_010081: GJU04_RS00555
subclass of: SO_0000673
so part of: GJU04_RS00555
location: complement(106000..106641)
location: region:106000-106641:-1
so has part: feature:106000-106641:-1:exon

WP_168892967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106000-106641:-1:exon

GJU04_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: minC
locus tag: GJU04_RS00560
old locus tag: GJU04_00560
so part of: sequence
location: 106830..107600
location: region:106830-107600:1
so has part: feature:106830-107600:1:exon
subclass of: SO_0000010

position:106830:1
position: 106830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107600:1
position: 107600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106830-107600:1:exon

GJU04_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: minC
locus tag: GJU04_RS00560
old locus tag: GJU04_00560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014498903.1
GO function: GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO process: GO:0000918 - division septum site selection [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinC
translation: MLTKIIKFRQNNFSFYVIHLYNNQPELIFNAIKKKINHSPIFFKKMSVIININYIKNEINWEKVYNAIISTGIKIIGVSGCNNNKNIIRSINNTGIPILFTNNKDNKKIINHDFQDQKKNINNITQKSIIKIIKEKSSLSLKKNIIYNRSRIIYNPIRSGQQIYAYNSDLIIINNVSTGAELIADGNIHVYGFMRGKALSGANGDNNCQIFCTQLFAELLSIAGEYLLQDQIPNKFLGKSSRIYLKNKVLTIKSCN
SIO_010081: GJU04_RS00560
subclass of: SO_0000673
so part of: GJU04_RS00560
location: 106830..107600
location: region:106830-107600:1
so has part: feature:106830-107600:1:exon

WP_168892968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106830-107600:1:exon

GJU04_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: minD
locus tag: GJU04_RS00565
old locus tag: GJU04_00565
so part of: sequence
location: 107635..108444
location: region:107635-108444:1
so has part: feature:107635-108444:1:exon
subclass of: SO_0000010

position:107635:1
position: 107635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108444:1
position: 108444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107635-108444:1:exon

GJU04_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: minD
locus tag: GJU04_RS00565
old locus tag: GJU04_00565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014500025.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0000918 - division septum site selection [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinD
translation: MRIIVVTSGKGGVGKTTSSAAIATGLAKYGKKTAVIDFDIGLRNLDLIMGCERRVVYDFINVLQGEATLNQALIKDKKNKNLYILPASQTKNKDALTYKGVEIIFKNLYKMNFDFIICDSPAGIETGALTALYFADEAIITTNPEISSIRDSDRVLGIISSQSKRAKYGEEPIKEYLLLTRYNPLRVDCGDMLSIDDIIEILGIKMIGVIPEDPLVLRASNQGKSIILHNNSNASLAYNDTVKRLLGEKIPLRFIKSEKKSFLQRLFWR
SIO_010081: GJU04_RS00565
subclass of: SO_0000673
so part of: GJU04_RS00565
location: 107635..108444
location: region:107635-108444:1
so has part: feature:107635-108444:1:exon

WP_168892969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107635-108444:1:exon

GJU04_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: minE
locus tag: GJU04_RS00570
old locus tag: GJU04_00570
so part of: sequence
location: 108446..108733
location: region:108446-108733:1
so has part: feature:108446-108733:1:exon
subclass of: SO_0000010

position:108446:1
position: 108446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108733:1
position: 108733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108446-108733:1:exon

GJU04_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: minE
locus tag: GJU04_RS00570
old locus tag: GJU04_00570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012667923.1
GO process: GO:0032955 - regulation of division septum assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division topological specificity factor MinE
translation: MNFINFFLSKKKKTANIAKKRLQIIISEESKKGYIYPYYIIQLKQEILKVISKYVKINPNMINIELDDKKNNISILELNITLPKTKKYIKKNNKK
SIO_010081: GJU04_RS00570
subclass of: SO_0000673
so part of: GJU04_RS00570
location: 108446..108733
location: region:108446-108733:1
so has part: feature:108446-108733:1:exon

WP_168892970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108446-108733:1:exon

GJU04_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tsaB
locus tag: GJU04_RS00575
old locus tag: GJU04_00575
so part of: sequence
location: complement(108745..109425)
location: region:108745-109425:-1
so has part: feature:108745-109425:-1:exon
subclass of: SO_0000010

position:108745:-1
position: 108745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109425:-1
position: 109425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108745-109425:-1:exon

GJU04_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tsaB
locus tag: GJU04_RS00575
old locus tag: GJU04_00575
EC number: 2.3.1.234
inference: COORDINATES: protein motif:HMM:TIGR03725.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
translation: MYKNILTIDTSTKYCLVIFKNNGIIYKKIQFCPCLHIKYILFLINSILSETNMLLSEINLLGYNLGPGNFTSIRIGIATIESMSYALNIPKIGLSHLMILAEKSWKITGIKQIITIIKCNKEFLYFSLYKRTKKGLWLGKSNECLLNYNDVINKILLLKGIWVLISDINKYFKYNVKLILNKNLKISFIKNQISSSEEIIDIINNILLNKKRIKKNYVINYIKNTL
SIO_010081: GJU04_RS00575
subclass of: SO_0000673
so part of: GJU04_RS00575
location: complement(108745..109425)
location: region:108745-109425:-1
so has part: feature:108745-109425:-1:exon

WP_168892971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108745-109425:-1:exon

GJU04_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hslV
locus tag: GJU04_RS00580
old locus tag: GJU04_00580
so part of: sequence
location: 109681..110208
location: region:109681-110208:1
so has part: feature:109681-110208:1:exon
subclass of: SO_0000010

position:109681:1
position: 109681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110208:1
position: 110208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109681-110208:1:exon

GJU04_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hslV
locus tag: GJU04_RS00580
old locus tag: GJU04_00580
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312886.1
GO function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO process: GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease subunit HslV
translation: MTTIVSVRKNGDVVIGGDGQATLGHIIMKGNVKKIRKLYHDTVIAGFAGGTADAFTLFELFEQKLEVYQGNLTKSAVELAKDWRTDRILRKLEALLVIADKITSLIITGSGDVIQPENNIVTIGSGGPYAQASARALCENTNLNAYEIVKKSLKIAGDICIYTNHNFTIEKLQCK
SIO_010081: GJU04_RS00580
subclass of: SO_0000673
so part of: GJU04_RS00580
location: 109681..110208
location: region:109681-110208:1
so has part: feature:109681-110208:1:exon

WP_168892972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109681-110208:1:exon

GJU04_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hslU
locus tag: GJU04_RS00585
old locus tag: GJU04_00585
so part of: sequence
location: 110229..>111101
location: region:110229-111101:1
so has part: feature:110229-111101:1:exon
subclass of: SO_0000010

position:110229:1
position: 110229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111101:1
position: 111101
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110229-111101:1:exon

GJU04_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hslU
locus tag: GJU04_RS00585
old locus tag: GJU04_00585
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HslU--HslV peptidase ATPase subunit
translation: MSEMTPKEIVKELDKFIIGQESAKKAVAIALRNRWRRMQLDENLRQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEIGYVGKEVDSIIRDLTDVAIKMIRIQAFNKNCYRAKEMAEERILNVLIPNKNNWNQDDNIESIRQKLKIKLKNGLLDNQEIEINVASTPMGIEIMAPPGMEEMTSQLQSLFQNLGGNKQKKRKLKVKDAIKLLIEEEAGKLINNEDIKQKAVEAVEQNGIVFLDEIDKICRRSNNVSSDISREGVQRDLLPLVEGCTVSTKHG
SIO_010081: GJU04_RS00585
subclass of: SO_0000673
so part of: GJU04_RS00585
location: 110229..>111101
location: region:110229-111101:1
so has part: feature:110229-111101:1:exon

WP_168892973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110229-111101:1:exon

GJU04_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00590
old locus tag: GJU04_00590
so part of: sequence
location: <111200..111725
location: region:111200-111725:1
so has part: feature:111200-111725:1:exon
subclass of: SO_0000010

position:111200:1
position: 111200
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:111725:1
position: 111725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111200-111725:1:exon

GJU04_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00590
old locus tag: GJU04_00590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672746.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 2
transl table: 11
product: AAA family ATPase
translation: SDISREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGSFQISKPSDLIPELQGRLPIRVELKALTSNDFKRILIEPDTSITIQYKALLATEKVNIIFTEDGIKKIAESAWKVNETTENIGARRLHTVLEHLMSDISYNANEYYNKSIIIDKNYVSKHLDTLIINEDISRYIL
SIO_010081: GJU04_RS00590
subclass of: SO_0000673
so part of: GJU04_RS00590
location: <111200..111725
location: region:111200-111725:1
so has part: feature:111200-111725:1:exon

WP_168892974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111200-111725:1:exon

GJU04_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hisIE
locus tag: GJU04_RS00595
old locus tag: GJU04_00595
so part of: sequence
location: complement(111791..112405)
location: region:111791-112405:-1
so has part: feature:111791-112405:-1:exon
subclass of: SO_0000010

position:111791:-1
position: 111791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112405:-1
position: 112405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111791-112405:-1:exon

GJU04_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hisIE
locus tag: GJU04_RS00595
old locus tag: GJU04_00595
EC number: 3.5.4.19
EC number: 3.6.1.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009113214.1
GO function: GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
translation: MLKQDILNNLNWTKINGLIPVIIQHKISGQILMHAYMNQKALQITLKNKKVTFFSRTRNKIWTKGETTGNFLYVQKITTDCDKDTLLILVKPINKTCHLNEYSCFKNTISDFTFLYLLENILNKKKSSLESSSSYTHKLYQSGLKRITQKVGEEAIETIIAANDNNKKETMQETADLIYHLIVLLKIKNINLYDIIKILKKRNS
SIO_010081: GJU04_RS00595
subclass of: SO_0000673
so part of: GJU04_RS00595
location: complement(111791..112405)
location: region:111791-112405:-1
so has part: feature:111791-112405:-1:exon

WP_168892975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111791-112405:-1:exon

GJU04_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hisF
locus tag: GJU04_RS00600
old locus tag: GJU04_00600
so part of: sequence
location: complement(112399..113178)
location: region:112399-113178:-1
so has part: feature:112399-113178:-1:exon
subclass of: SO_0000010

position:112399:-1
position: 112399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113178:-1
position: 113178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112399-113178:-1:exon

GJU04_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hisF
locus tag: GJU04_RS00600
old locus tag: GJU04_00600
EC number: 4.3.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016153558.1
GO function: GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: imidazole glycerol phosphate synthase subunit HisF
translation: MLAKRIIPCLDVYQNVVVKGKQFKNHKIIGDILSLANKYDKDGADELVFYDITASIDHRLVDKKWISKIAKIISIPICIAGGIKSIDDAAKILHSGAEKISINTPALNNPSLITKLSKYFGKQCIVVGIDSWYNKKDKKYYVYKYTGNKKNIKITNWETIEWVKKVQKLGAGEIVLNMMNQDGLCSGYDIVQLKKVRRVCQIPLIASGGAGSFNSFYDVFHKKVNVDGALAASVFHKNIINIKILKKFLHKKNIEVRIC
SIO_010081: GJU04_RS00600
subclass of: SO_0000673
so part of: GJU04_RS00600
location: complement(112399..113178)
location: region:112399-113178:-1
so has part: feature:112399-113178:-1:exon

WP_168892976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112399-113178:-1:exon

GJU04_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00605
old locus tag: GJU04_00605
so part of: sequence
location: complement(113160..113900)
location: region:113160-113900:-1
so has part: feature:113160-113900:-1:exon
subclass of: SO_0000010

position:113160:-1
position: 113160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113900:-1
position: 113900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113160-113900:-1:exon

GJU04_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00605
old locus tag: GJU04_00605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053633.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
translation: MIIPAIDLIKGQVVRLHQGKFNLKRKYLYEPLFYIKKYIKQGAQKIHIIDLDGAKNPSKKQIVLLKKIFKYNLPPIQLGGGIRSKKDIDLIFNLIPKVQIILGSSIIKNFKDVQKWFRLYNPNSIILALDIKINKKNQKIIFINGWQDKSNIIFEDIIEKFLDLGLKHVLCTDISRDGTYLGPNINLYTEIVKNYPQIFFQASGGISSLQDIINLKKSGVKHIIIGRAFLEKKFTIQEANLCWQKE
SIO_010081: GJU04_RS00605
subclass of: SO_0000673
so part of: GJU04_RS00605
location: complement(113160..113900)
location: region:113160-113900:-1
so has part: feature:113160-113900:-1:exon

WP_168892977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113160-113900:-1:exon

GJU04_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hisH
locus tag: GJU04_RS00610
old locus tag: GJU04_00610
so part of: sequence
location: complement(113909..114499)
location: region:113909-114499:-1
so has part: feature:113909-114499:-1:exon
subclass of: SO_0000010

position:113909:-1
position: 113909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114499:-1
position: 114499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113909-114499:-1:exon

GJU04_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hisH
locus tag: GJU04_RS00610
old locus tag: GJU04_00610
EC number: 4.3.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011283007.1
GO function: GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: imidazole glycerol phosphate synthase subunit HisH
translation: MKIVILDTSCGNFYSLQSTIKKIGFSSKITNKKKLILDADKIFLPGVGSADSIIKKLKNDNLIKLIQDCKKDVLGICLGMQILGKYSEENEGIATLGILNYSVNLMDNRYKPIPHMGWNKVNNIISSPLFNNINQNSYFYFSHSYNIDINNNTIATTNYEKEFSSVIQKENFFGVQFHPERSGINGIQLIKNFLNI
SIO_010081: GJU04_RS00610
subclass of: SO_0000673
so part of: GJU04_RS00610
location: complement(113909..114499)
location: region:113909-114499:-1
so has part: feature:113909-114499:-1:exon

WP_168892978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113909-114499:-1:exon

GJU04_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hisB
locus tag: GJU04_RS00615
old locus tag: GJU04_00615
so part of: sequence
location: complement(114496..115566)
location: region:114496-115566:-1
so has part: feature:114496-115566:-1:exon
subclass of: SO_0000010

position:114496:-1
position: 114496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115566:-1
position: 115566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114496-115566:-1:exon

GJU04_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hisB
locus tag: GJU04_RS00615
old locus tag: GJU04_00615
EC number: 3.1.3.15
EC number: 4.2.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005128082.1
GO function: GO:0004401 - histidinol-phosphatase activity [Evidence IEA]; GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
translation: MLKKILFIDRDGTLISEPKRNYQVDNINKLFFEKNVIIALSELKKFSYLFVIITNQDGLGTKHFSYKSFNIPHNFMINIFKSQGIEFENVFICPHYSYDNCICRKPNITLLKQYLNNNLDNINSYVIGDRLTDIKLAKNIGINGILYNQKTCNWLDILTKLTPIKRYATIKRITKETIIDVELFLDKKGKNNINTGINFLNHMLEQIAIHGGFILNIYSKGDLYIDDHHTIEDIAITLGKTFLKAIGNKKGINRFGFLLPMDESLAQCAIDLSGRPYLQYHVNFKYQKVGDLNTEMIKHFFYSLSYSMACNIYLKVTGENDHHKIESLFKAFGCSLKQAIKVGNNHIIPSSKGVLI
SIO_010081: GJU04_RS00615
subclass of: SO_0000673
so part of: GJU04_RS00615
location: complement(114496..115566)
location: region:114496-115566:-1
so has part: feature:114496-115566:-1:exon

WP_168892979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114496-115566:-1:exon

GJU04_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hisC
locus tag: GJU04_RS02280
so part of: sequence
location: complement(115594..116718)
location: region:115594-116718:-1
so has part: feature:115594-116718:-1:exon
subclass of: SO_0000010

position:115594:-1
position: 115594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116718:-1
position: 116718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115594-116718:-1:exon

GJU04_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hisC
locus tag: GJU04_RS02280
EC number: 2.6.1.9
inference: COORDINATES: protein motif:HMM:TIGR01141.1
GO function: GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidinol-phosphate transaminase
translation: MTIRKKYINKNCFKQKKNNSIYKIVRKNILNFTPYKSARSLYKNNTNNLISLNANESPITSIFSLNKRIFNKYPEPQSKELINLYSKYVNLNSKNILITRGADEGIDLIIRTFCNKKNDKILFCPPTYDMYRVTAEILDIKYITINSNSNWDLDLNKIKQNLHNIKIIFICNPNNPTGNYINQNNIIKLLELIKNKIIIVIDEAYIEFCIDQTLTNFINKYNNLIILRTLSKAFALAGLRCGFILANKYIIDILIKVIAPYPIPEPVIDIAIQALNLKNLIIMKNNVKTIINNKQWLIKHLKNCSCIKNIFNSSTNFILIKFHNSEIIFKKLIKKKIIVRNQNHEKKLNNCLRITIGTFIECKKLFFEIKKLSF
SIO_010081: GJU04_RS02280
subclass of: SO_0000673
so part of: GJU04_RS02280
location: complement(115594..116718)
location: region:115594-116718:-1
so has part: feature:115594-116718:-1:exon

WP_246208784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115594-116718:-1:exon

GJU04_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hisD
locus tag: GJU04_RS02285
pseudo: true
so part of: sequence
location: complement(<116707..117996)
location: region:116707-117996:-1
so has part: feature:116707-117996:-1:exon
subclass of: SO_0000010

position:116707:-1
position: 116707
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:117996:-1
position: 117996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116707-117996:-1:exon

GJU04_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hisD
locus tag: GJU04_RS02285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004095959.1
GO function: GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: histidinol dehydrogenase
SIO_010081: GJU04_RS02285
subclass of: SO_0000673
so part of: GJU04_RS02285
location: complement(<116707..117996)
location: region:116707-117996:-1
so has part: feature:116707-117996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116707-117996:-1:exon

GJU04_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hisG
locus tag: GJU04_RS00625
old locus tag: GJU04_00625
so part of: sequence
location: complement(118001..118900)
location: region:118001-118900:-1
so has part: feature:118001-118900:-1:exon
subclass of: SO_0000010

position:118001:-1
position: 118001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118900:-1
position: 118900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118001-118900:-1:exon

GJU04_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hisG
locus tag: GJU04_RS00625
old locus tag: GJU04_00625
EC number: 2.4.2.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1
GO function: GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP phosphoribosyltransferase
translation: MPDNNRLRIAMQKSGRLSNESSKLLKNCGLKINLQQQKLIAFAENMPIDILRVRDDDIPGLIMEGVVDLGIIGQNVLEEEVLARLSRGDNAKYLILRKLNFGICRLSIAIPINKNYTGLQSLQNTCIATSYPNLLKKYLDQHHITFKSCMLNGSVELAPRLGLSNAICDLVSTGATLEAHGIKEVEIIYISQACLIQRYDKITNFKQKLVNKLLARIKGVIQARESKYIILHVPNKKLKMVMSLLSYVKNPTIFPLIGNTKNVVIHMVCSETLFWEKMEKLKLLGVNSILVLPIEKIME
SIO_010081: GJU04_RS00625
subclass of: SO_0000673
so part of: GJU04_RS00625
location: complement(118001..118900)
location: region:118001-118900:-1
so has part: feature:118001-118900:-1:exon

WP_168892980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118001-118900:-1:exon

GJU04_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rnhA
locus tag: GJU04_RS00630
old locus tag: GJU04_00630
so part of: sequence
location: complement(119038..119505)
location: region:119038-119505:-1
so has part: feature:119038-119505:-1:exon
subclass of: SO_0000010

position:119038:-1
position: 119038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119505:-1
position: 119505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119038-119505:-1:exon

GJU04_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rnhA
locus tag: GJU04_RS00630
old locus tag: GJU04_00630
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008913393.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HI
translation: MYKNINIFTDGSCIHNPGPGGCAAILKYHKYEKILTKGFFFTTNNRMELMASIIALESLKENCNIYLFTDSNYLKKGITIWLYNWKKYNWIRNNKKIVKNIDLWKRLELSLSQHNIYWKWIKSHSYHKLNNKCDKLARISAKNPLNQDLGYIKNK
SIO_010081: GJU04_RS00630
subclass of: SO_0000673
so part of: GJU04_RS00630
location: complement(119038..119505)
location: region:119038-119505:-1
so has part: feature:119038-119505:-1:exon

WP_168892981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119038-119505:-1:exon

GJU04_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dnaQ
locus tag: GJU04_RS00635
old locus tag: GJU04_00635
so part of: sequence
location: 119545..120282
location: region:119545-120282:1
so has part: feature:119545-120282:1:exon
subclass of: SO_0000010

position:119545:1
position: 119545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120282:1
position: 120282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119545-120282:1:exon

GJU04_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dnaQ
locus tag: GJU04_RS00635
old locus tag: GJU04_00635
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007887209.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit epsilon
translation: MKKINIRQVVLDTETTGMNLSYPYYIGHRIIEIGIIEIINRNITKNYFHTYINPEKKISKEAFNIHGISNKFLSTKPVFSDILDNFLNFIKGAELIIHNAQFDINFLNYELSFIKKKIPKIEDICIITDTLKIARNIFPGKRNSLNSLCNRFNIDISKRNLHGALLDAKLLAHVFLFMTTKQNSFQLKFLKEKDNIFNNKLKFLHKKLKEKKLLIINASEEELKLHQLKLNLIKNRCGFSLWEKK
SIO_010081: GJU04_RS00635
subclass of: SO_0000673
so part of: GJU04_RS00635
location: 119545..120282
location: region:119545-120282:1
so has part: feature:119545-120282:1:exon

WP_168892982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119545-120282:1:exon

GJU04_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00640
old locus tag: GJU04_00640
so part of: sequence
location: 120332..120405
location: region:120332-120405:1
so has part: feature:120332-120405:1:exon
subclass of: SO_0000663

position:120332:1
position: 120332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120405:1
position: 120405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120332-120405:1:exon

GJU04_RS00640
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00640
old locus tag: GJU04_00640
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:120366..120368,aa:Asp,seq:gtc)
SIO_010081: GJU04_RS00640
subclass of: SO_0000673
so part of: GJU04_RS00640
location: 120332..120405
location: region:120332-120405:1
so has part: feature:120332-120405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120332-120405:1:exon

GJU04_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00645
old locus tag: GJU04_00645
so part of: sequence
location: complement(120438..121271)
location: region:120438-121271:-1
so has part: feature:120438-121271:-1:exon
subclass of: SO_0000010

position:120438:-1
position: 120438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121271:-1
position: 121271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120438-121271:-1:exon

GJU04_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00645
old locus tag: GJU04_00645
inference: COORDINATES: protein motif:HMM:NF013117.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel
translation: MNKFTSVLDFIKLWIFKNRIFILYQCEHFVLAGMILFFGLWGVRIVTKTTRNVFTIRNIDPITTGFLTNIFKYSLTIFVIVSALSSIGLKTSSIFAAFGTIGLVIGLAWQSALSNLASGLLIITFRIFKVGDYINIGNVTGKITNVEIFCTLFKTFDGSIISVPNGKILTENIINFSKSDEYRNKITLGIARNLIQKDINMIKKILLDTVSLNDKIIKNSIVNVIVDEITNNSINFTVFFWINDFINKKEICSDLINILKNNLELYKKSCVLWINND
SIO_010081: GJU04_RS00645
subclass of: SO_0000673
so part of: GJU04_RS00645
location: complement(120438..121271)
location: region:120438-121271:-1
so has part: feature:120438-121271:-1:exon

WP_168892983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120438-121271:-1:exon

GJU04_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: fbaA
locus tag: GJU04_RS00650
old locus tag: GJU04_00650
so part of: sequence
location: complement(121335..122414)
location: region:121335-122414:-1
so has part: feature:121335-122414:-1:exon
subclass of: SO_0000010

position:121335:-1
position: 121335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122414:-1
position: 122414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121335-122414:-1:exon

GJU04_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: fbaA
locus tag: GJU04_RS00650
old locus tag: GJU04_00650
EC number: 4.1.2.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015872577.1
GO function: GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II fructose-bisphosphate aldolase
translation: MSKILNYIKPGVVVGHDLQTIFKIAKENKFALPAVNCIGTDSINIVLETAAKLRSSVIIQFSNSGASFIAGKGLEMINPHLAPVIGAISGAKHVHKIAKYYGIPVILHTDHCQKNKLSWIDNLLDENEKYYLIHKKSLFSSHMIDLSQESIKDNIKICSYYLKRMSKMQMTLEIELGCTGGEEDGIDNSKITKKSLYTDSYDINYAYEKLKLISSQFIIAASFGNVHGVYQKGHVKLLPKILRNAQKFISKKHNIPNNSINFVFHGGSGSSLLEIKESINYGVVKMNIDTDTQWATWEGVLKFYKKYEKYLQTQLGNPKGFNKPNKKYYDPRSWIRASQISMQKRLEQTFKELNAINIL
SIO_010081: GJU04_RS00650
subclass of: SO_0000673
so part of: GJU04_RS00650
location: complement(121335..122414)
location: region:121335-122414:-1
so has part: feature:121335-122414:-1:exon

WP_168892984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121335-122414:-1:exon

GJU04_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00655
old locus tag: GJU04_00655
so part of: sequence
location: complement(122482..123636)
location: region:122482-123636:-1
so has part: feature:122482-123636:-1:exon
subclass of: SO_0000010

position:122482:-1
position: 122482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123636:-1
position: 123636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122482-123636:-1:exon

GJU04_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00655
old locus tag: GJU04_00655
EC number: 2.7.2.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672659.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycerate kinase
translation: MLSILNLNIENKILLIRSDLNVPLDKKGNITSDIRIRLSLPTIKYALEKKSKIIIASHLGRPMEGKYNSLFSLKKIAIYLEKNLKHKVILKKNYLNGCSFKNNEIILLENVRFNIGEKNNNKKLSKKYASLCDIFVMDAFATSHRMHSSTYGVINFAKKSCAGLLLINEIKNLNRFLKNPIKPIFSIIGGSKISTKFNILKKLCKLSEKVIVGGGIANTLLSLNNNIGNSLYEPNAILLAQEINKKYKNIIMPIDCIVSTSINNNALIKNKNINNILKNEKILDIGSKTINIIKNSLKKAGTILWNGPIGVFEFEKFRKGTEIIIKSIINSNAFSIVGGGDTLAAVELFNAFDKISYISTGGGAFLKYIEGNKLPVISILENIS
SIO_010081: GJU04_RS00655
subclass of: SO_0000673
so part of: GJU04_RS00655
location: complement(122482..123636)
location: region:122482-123636:-1
so has part: feature:122482-123636:-1:exon

WP_168892985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122482-123636:-1:exon

GJU04_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tkt
locus tag: GJU04_RS00660
old locus tag: GJU04_00660
so part of: sequence
location: complement(123678..125684)
location: region:123678-125684:-1
so has part: feature:123678-125684:-1:exon
subclass of: SO_0000010

position:123678:-1
position: 123678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125684:-1
position: 125684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123678-125684:-1:exon

GJU04_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tkt
locus tag: GJU04_RS00660
old locus tag: GJU04_00660
EC number: 2.2.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017348476.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004802 - transketolase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase
translation: MPSRRDLANAIRFLSIDAIENSKSGHPGAPMGMADIAEVLWRNYLNHNPNNPTWINRDRFILSNGHCVMLIYSLLHLTGYNLTVSDLKNFRRLYSKTPGHPEFRCTPNIETSTGPLGQGLANAVGMAIAEKTLASQFNRLNYNIIDHYTYVFLGDGCLMEGISHEVCSLAGTLKLKKLIVFYDNNGISIDGNITGWFNDDTKKRFESYGWNVISNIDGHNFQKIEKAIDKAKSLKEEKPSLLICNTIIAFGSPNKSDKNISHGAPLGKEEVILTRKNLNWKYKPFEIPLDIYKKWDAKKIGNIKESKWENIFKKYCNKFPILAKEFKRRINNLLPKNWNDEVTKFIYKLNNTNTNFSTRESSQYILQKYSKLLPELIGGSADLSSSNLTILKNSKPINKFKNGNYIHYGVREFGMMAIANGISLYKGFIPYTATFLVFSDYCRNAIRMAALMKIRNIMIYTHDSIGLGEDGPTHQPIEQLSSLRLIPNISIWRPCDKIETAISWKISIENIYKPTVLILSRQNLPTQKRNKKQISLISYGAYILKDCLDKNPQIILIATGSEVSLAVEIYKKLSFLKYKIRVISMPSTDTFDKQTKEYQDYILPKHIKKRVAIEAGSTDFWYKYVGLNGLVIGINKFGYSGSAEKLFEKFGFTVENIILKIKKTFKII
SIO_010081: GJU04_RS00660
subclass of: SO_0000673
so part of: GJU04_RS00660
location: complement(123678..125684)
location: region:123678-125684:-1
so has part: feature:123678-125684:-1:exon

WP_168892986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123678-125684:-1:exon

GJU04_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: metK
locus tag: GJU04_RS00665
old locus tag: GJU04_00665
so part of: sequence
location: 125897..127054
location: region:125897-127054:1
so has part: feature:125897-127054:1:exon
subclass of: SO_0000010

position:125897:1
position: 125897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127054:1
position: 127054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125897-127054:1:exon

GJU04_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: metK
locus tag: GJU04_RS00665
old locus tag: GJU04_00665
EC number: 2.5.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874364.1
GO function: GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO process: GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine adenosyltransferase
translation: MTEYLFTSESVSEGHPDKIADQISDAILDKIIEQDINSRVACETYIKNNIVLIGGEITTKAKINIEKITRKTIKEIGYTNPDRGFDASTCTILNIISKQSKDINKGITSNLDKANQKAGDQGFVFGYATNETNVFMPAPIIYAHKLMYQQALIRKKKILSWLEPDAKSQITFKYKNDKIIDIDSVVLSTQISKEISSKKLEEAIMEEIIKPVLPKIWINKKTKFFINPSGRFIIGGPISDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKIDRSAAYAARYIAKNIVASSLASRCEIQIAYIIGIAKPISIMVNTFGTGKVSDKKITLFIKKNFDLRPFSLITMLDLLKPIYKKTASYGHFGRNIFSWEKTDKILQFRNFFEIN
SIO_010081: GJU04_RS00665
subclass of: SO_0000673
so part of: GJU04_RS00665
location: 125897..127054
location: region:125897-127054:1
so has part: feature:125897-127054:1:exon

WP_168892987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125897-127054:1:exon

GJU04_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: gyrA
locus tag: GJU04_RS00670
old locus tag: GJU04_00670
so part of: sequence
location: complement(127101..129641)
location: region:127101-129641:-1
so has part: feature:127101-129641:-1:exon
subclass of: SO_0000010

position:127101:-1
position: 127101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129641:-1
position: 129641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127101-129641:-1:exon

GJU04_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: gyrA
locus tag: GJU04_RS00670
old locus tag: GJU04_00670
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014498861.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MNFFAKEIKLINIEEELKNSYLDYAMSVIIGRALPDVRDGLKPVHRRILYAMYILGNTWNKSYKKSARIVGDVIGKYHPHGDNAVYDTIVRLAQSFSLRYPLIKGQGNFGSIDGDSAAAMRYTEIKMSKISQEIINDLEKNTVNFLSNYDDTEKIPEIMPTKIPNLLINGSSGIAVGMTTNIPPHNITEVINACLAYIKNNTITIKELMNYIPGPDFPTAGIIYGIDEIENAYNTGKGKIFLRGRIKINKDKQKKYKKIIIYELPYQINKSKLIEKIAYLIKEKKIQGIKTLRDESDKDGIRILIKIKKDTSINVILNNLYKLTPLQTSFSIKMVSLYKGKPTLMSLKNIIKAFISHRREIVIRRTNYEINKARNKAHILEGLIVALLNIKKIIKIIRSSKISETIKDKIYLQSWKIPNIFQIFNLQEKKTLNIYLTNSNLIKFNDNYHFSYTQITAILELKLNKLTNLEHKKLCIEYENLIYKISNLMKIIENYEYLMKVIYNELVLVRKEFGDKRKTEIILNDKNNSIIQKKDLIKHEKVIITLSYQGYIKYQKITEYNLQHRGGKGKIAVRLKENDFIYKILIAYTHDQILCFSNKGYLYWLKVYDIPEANRYSKGKPIINFLPLKNNEFINTFIVINNYSDNSNLIMVTLQGKIKKTNLNKFNKPRSNGIIAIKLKKNDILIGVSIIKQNDKIMLFSSLGKVVKFNESQIKSMGRNTIGVKGISFLNKKKDYVVSLIVLNHKFQKNIFTITENGYGKCTNNKNYPTRSRATKGIISMKINQRNGKLAGSLKVTDNDQVIIITNMGTLIRINISEICVVGRNTKGVIIIKTKYNEKVIGLQKI
SIO_010081: GJU04_RS00670
subclass of: SO_0000673
so part of: GJU04_RS00670
location: complement(127101..129641)
location: region:127101-129641:-1
so has part: feature:127101-129641:-1:exon

WP_168892988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127101-129641:-1:exon

GJU04_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mutS
locus tag: GJU04_RS00675
old locus tag: GJU04_00675
so part of: sequence
location: complement(129863..132256)
location: region:129863-132256:-1
so has part: feature:129863-132256:-1:exon
subclass of: SO_0000010

position:129863:-1
position: 129863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132256:-1
position: 132256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129863-132256:-1:exon

GJU04_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mutS
locus tag: GJU04_RS00675
old locus tag: GJU04_00675
inference: COORDINATES: protein motif:HMM:TIGR01070.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair protein MutS
translation: MSTPMMEQYFKFKKQYPNILLFYRLGDFYEMFFEDAKKASKLLNIVLTKRGKLNGKPIPMAGIPVNSIENYLSKLIKLGESIAICEQIEKKKDTLFKNKILNREIVRIITPGTVSDDILLNNNIDNLIGSIYQDIKSGFGYATLNISSGDFRIMENKDINIIAGELQRTNPKELLYSENFQDISLLEKRNCIRRRPLWEFDIDTAVQQLNMQFKTQNLKSFGIEKSFLAIRAAGCLIQYVKDTQRVYLPHINNIFLENHNNEIIMDENTRKNLEIINSISGDKDNTLIKVLDYTMTNMGSRLLQRWLNNPIRNVKIILNRQKNIFVLQKYFLDFQKILLKISDIERIIARLALKTAKPYDLVSLRQTLNYLPKIYKILKKINNCEIKLKILDLGLFSSLKKLLEESIKKKPSLSLKEGNVIATGYNKELDKLRELSNDSNQYLSFIENQERNLLKIEKLKIGYNTIHGYYIQINKSYKDNLPNKYIQIQTLKNCKRYTIPELQKYQKNILLSKEKLLNLEKYLYNKLFYYITPFLVNLQKISLYLSELDVLCNLAERSLTLNYTCPIISKKIGISLINSRHPIVENILKSSFIPNNVILTDKQNMLLITGPNMGGKSTYMRQIALIILMTYIGSYVPADKAIIGPIDRIFTRIGSTDNISFGLSTFMVEMIETANILRNATKKSLVLMDEIGRGTSTHDGLAIAWACAENIAKKIKSLTLFATNYIELTNLKIKNKCIKNMYFDAIEVNNSIVFLYKIKNGSINKNYGLFVASLAGIPKEVINQAKKKIKQLENYNI
SIO_010081: GJU04_RS00675
subclass of: SO_0000673
so part of: GJU04_RS00675
location: complement(129863..132256)
location: region:129863-132256:-1
so has part: feature:129863-132256:-1:exon

WP_168892989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129863-132256:-1:exon

GJU04_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00680
old locus tag: GJU04_00680
so part of: sequence
location: complement(132385..133116)
location: region:132385-133116:-1
so has part: feature:132385-133116:-1:exon
subclass of: SO_0000010

position:132385:-1
position: 132385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133116:-1
position: 133116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132385-133116:-1:exon

GJU04_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00680
old locus tag: GJU04_00680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013317488.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bax inhibitor-1/YccA family protein
translation: MIEYQDLKSTTLKKEKYHIQTYFRRVYGWMSCGLLLTAFVSWYVSNTIEVSNYLLNNKFCLLGLCFLQFALVFIMSNLLNRLSGKTLTTLFMFYSSLTGLTTAGIFSVYNQNTIFTAFITTSLMFLSMCFWGYVTKKDLSYLGNIILMGIFGIIISSLTNFWLQNNLLSSIINYVSVIFFTLLIAYDTQKLKNIAKQISLNINDKDNLRRYAILGALMLYLDFINLFFIILNLISNNDNNDDK
SIO_010081: GJU04_RS00680
subclass of: SO_0000673
so part of: GJU04_RS00680
location: complement(132385..133116)
location: region:132385-133116:-1
so has part: feature:132385-133116:-1:exon

WP_168892990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132385-133116:-1:exon

GJU04_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rsmH
locus tag: GJU04_RS00685
old locus tag: GJU04_00685
so part of: sequence
location: 133245..134174
location: region:133245-134174:1
so has part: feature:133245-134174:1:exon
subclass of: SO_0000010

position:133245:1
position: 133245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134174:1
position: 134174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133245-134174:1:exon

GJU04_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rsmH
locus tag: GJU04_RS00685
old locus tag: GJU04_00685
EC number: 2.1.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672532.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MNHIPVLLKESIQSLNIKNNGMYIDATYGCGGHTKLILSKLGNYGRIYAIDCDIKTILKHKIIDNRIVYINNNFSNLKSILDNKIGKIDGILFDLGISSFQLNNPQRGFSYMFNGPLDMRINQKKEETAYTLLKNINEKKLSEILKKYGEEKYHKKIAYNIKKYILHKKLNNTQDLSTLICSINKKSKFKHPAKRSFQAIRIFLNKEIEELKKALNNSLKLLKKGGILSIISFHSIEDRIIKYFMKKNSILYKKNIHHKLPLTEKEINNFYYKNNKIKLKIISRIFPSKKEIFKNPRSRSAILRIAEKI
SIO_010081: GJU04_RS00685
subclass of: SO_0000673
so part of: GJU04_RS00685
location: 133245..134174
location: region:133245-134174:1
so has part: feature:133245-134174:1:exon

WP_211080568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133245-134174:1:exon

GJU04_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00690
old locus tag: GJU04_00690
so part of: sequence
location: 134238..135743
location: region:134238-135743:1
so has part: feature:134238-135743:1:exon
subclass of: SO_0000010

position:134238:1
position: 134238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135743:1
position: 135743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134238-135743:1:exon

GJU04_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00690
old locus tag: GJU04_00690
EC number: 6.3.2.13
inference: COORDINATES: protein motif:HMM:NF001126.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
translation: MISSLFSLQKLLNKYIKNNLIKNILIDRMVLDSRKIKGKNCLFVAIKGYKNNGKNFIKDAILKGAIAILTYSDEKISSFSIIFKKNIPIIYLPNLNKHISYFAGLLYDNPSKKIPIIGITGTNGKTSITHFLMQWIKLLGGNPAILSTIGNGFSNKLVQTNNTTDSAIKIQSTIRKFIKKKANIIIMEVSSHGLTQFRVYNIFFTVGIFTNLTRDHLDYHHNMNNYELSKWNFFSNHKVKKKIINIDDNIGFKWSKRLSDVISVTTKKKKLYKSKIFIYIKNVIYLPNKTIILFNSSWGNGKMRINLIGKFNVINIILGMAALLSLNYPLKKLLQTVSKIKPVQGRMQKIYFKKKYSNIVIDYAHSPDSLKNILLTIRSITCGKVWCIFGCGGERDLGKRKIMGYIATKYAENVILTTDNPRTENINKIIEDIKQGCSLSSNIYIILDRTKAISYAIYNSSQRDTILIAGKGHENYQIIGNKILNYSDFSTIKNILKNKYE
SIO_010081: GJU04_RS00690
subclass of: SO_0000673
so part of: GJU04_RS00690
location: 134238..135743
location: region:134238-135743:1
so has part: feature:134238-135743:1:exon

WP_168892991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134238-135743:1:exon

GJU04_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: murF
locus tag: GJU04_RS00695
old locus tag: GJU04_00695
so part of: sequence
location: 135736..137115
location: region:135736-137115:1
so has part: feature:135736-137115:1:exon
subclass of: SO_0000010

position:135736:1
position: 135736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137115:1
position: 137115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135736-137115:1:exon

GJU04_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: murF
locus tag: GJU04_RS00695
old locus tag: GJU04_00695
inference: COORDINATES: protein motif:HMM:TIGR01143.1
GO function: GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: MNKLISLKKLSKIVNGILIGGNNIKILHYSINSKKIKKNCMFIAIHGKKLDGHFFINEAIKNGALAILVEKFVNVNIAQIIVFDTILALGKIGLWKRTKFNNNPVIGITGSSGKTSVKEMTISILKKKYKVIFTKKNMNNHIGIPLTLLDFTNKYQCAVIEIGGNQINDITYTSSLVKPNIALINNISESHLQGFKSLKNIIKCKSNIFNYLTNQGTAIVNYDDNNQKKILKKLINNCNILTFSLYNKKTDFFTKNIKILPNKIRFILISPIGEILIRLFLIGGGIHNISNALASAALSFSIGCSLDEIANGLKYFRSIQGRMYPIIIDNNKLLINDTYNANPNSVNIAINILKNFKGTKILVIGDMLELGKYTLFYHKKIKNLILQTNIDYIFSFGKYSKYITENNINAQHFLNKKTLINKLFLIIKKLKNYTILFKGSRNNKMEILIDILLEKLKCY
SIO_010081: GJU04_RS00695
subclass of: SO_0000673
so part of: GJU04_RS00695
location: 135736..137115
location: region:135736-137115:1
so has part: feature:135736-137115:1:exon

WP_168892992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135736-137115:1:exon

GJU04_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mraY
locus tag: GJU04_RS00700
old locus tag: GJU04_00700
so part of: sequence
location: 137106..138194
location: region:137106-138194:1
so has part: feature:137106-138194:1:exon
subclass of: SO_0000010

position:137106:1
position: 137106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138194:1
position: 138194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137106-138194:1:exon

GJU04_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mraY
locus tag: GJU04_RS00700
old locus tag: GJU04_00700
EC number: 2.7.8.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499929.1
GO function: GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospho-N-acetylmuramoyl-pentapeptide- transferase
translation: MLLILFKYLQYFLKNLDFFLISFKIRFIMAFLISFLITFFLSPFFINYFKKKKISQIIRKNGPITHYSKNNTPTMGGIILLLSIFISVIFCSDLSNKYIFYSLIMMLLYSIIGFIDDLYKIILNNSKGLSSSKKFFFQSICTIPIMSFIYINNTEKLYIQFILPFFTNKIIKYNLNYTLYLIISYLIVIGISNSVNLTDGLDGLVIMPIIFISLGLSILCYSSGDIYFSEYLNIIYVKNAKELIIICLAIIGSGLGFLWYNTYPAKIFMGDVGSLSLGCIISMIAILIRQEFLFLIMCGIFILESISVIIQVIKFKYNRKRFFLMAPLHHHYELKGIMEPCIIIRFWIISLILVLFSLIIII
SIO_010081: GJU04_RS00700
subclass of: SO_0000673
so part of: GJU04_RS00700
location: 137106..138194
location: region:137106-138194:1
so has part: feature:137106-138194:1:exon

WP_168892993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137106-138194:1:exon

GJU04_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: murD
locus tag: GJU04_RS00705
old locus tag: GJU04_00705
so part of: sequence
location: 138205..139521
location: region:138205-139521:1
so has part: feature:138205-139521:1:exon
subclass of: SO_0000010

position:138205:1
position: 138205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139521:1
position: 139521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138205-139521:1:exon

GJU04_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: murD
locus tag: GJU04_RS00705
old locus tag: GJU04_00705
EC number: 6.3.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053742.1
GO function: GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
translation: MNKKILIIGLGLTGISCLNFLLKKNIIPSVMDTCNHPKFIKKIPSYIPCHLGFLKKEWILNSQLIILSPGISIFNNILLEAKKKGIEIIGDIELFARYNTTPVIAITGTNGKSTVTNMIGKIMKKNNFNISVGGNIGYPVLDLLSFTRDFYILEISSFQLETIKKLNIYIAVILNISQDHMDRYPLGMEQYRDFKLRIYKYASICIYNADNILCYPKYFDQKKKYITFGEFSGKYTLSYAKKNIYLQINNKKILNFNKTKLIGIHNYLNALAVLAVTDLLKISKKISLQEISNYLNMDHILQIIHIENGVTWINDSKSTNVSSTKAALKYLYKKKRIWLLLGGYDKNCELYLLKKYLQKRNNINVYCFGISSKKILSFYPKAKVVKTIYQGIEKIIKLVNFGDVVLLSPACSSIDQFKNFKHRGKEFIRLVKKFHNSK
SIO_010081: GJU04_RS00705
subclass of: SO_0000673
so part of: GJU04_RS00705
location: 138205..139521
location: region:138205-139521:1
so has part: feature:138205-139521:1:exon

WP_168892994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138205-139521:1:exon

GJU04_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: murG
locus tag: GJU04_RS00710
old locus tag: GJU04_00710
so part of: sequence
location: 139587..140648
location: region:139587-140648:1
so has part: feature:139587-140648:1:exon
subclass of: SO_0000010

position:139587:1
position: 139587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140648:1
position: 140648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139587-140648:1:exon

GJU04_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: murG
locus tag: GJU04_RS00710
old locus tag: GJU04_00710
EC number: 2.4.1.227
inference: COORDINATES: protein motif:HMM:TIGR01133.1
GO function: GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
translation: MKKKKIIIVAGGTGGHINPALNIAYKLIQKGWEVRWLGTSSRMEANIIPKKDIYIYLIEFCKFKKKNIFSIIITIFKLIVLTYKSILIYKNYKPHLVLTMGSYISGPSGLAAWLCNIPLIIHEQNSISGITNKILSKIATIKMEAYPNTLNNAILVGNPISNKIIKLSLYKRSFIKIHKPIHLLITGGSQGADLINKIGIKLAKILGNKISILHQVGKGNFKKIYYEYKKNKINNLTIQEYIENIDKAYKWADIILCRSGAMTVTEITTIGLPAIFIPFQHKDKQQYFNAINLKKIGVAKIYEQHNLNINKIAHTILTLNKKKIAYMAKRSYNLVKINSIELIYKELKKIKIN
SIO_010081: GJU04_RS00710
subclass of: SO_0000673
so part of: GJU04_RS00710
location: 139587..140648
location: region:139587-140648:1
so has part: feature:139587-140648:1:exon

WP_168892995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139587-140648:1:exon

GJU04_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: murC
locus tag: GJU04_RS00715
old locus tag: GJU04_00715
so part of: sequence
location: 140679..142157
location: region:140679-142157:1
so has part: feature:140679-142157:1:exon
subclass of: SO_0000010

position:140679:1
position: 140679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142157:1
position: 142157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140679-142157:1:exon

GJU04_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: murC
locus tag: GJU04_RS00715
old locus tag: GJU04_00715
EC number: 6.3.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499126.1
GO function: GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate--L-alanine ligase
translation: MFNKTNLNQIPKMKNINHIYLIGIGGSGMSGIAVILAKQGYKVSGSDIFPSNFIRKKLNSLNIKIYLKHDAKNITNNIDLIILSTAIKNNNSELIQAKKLNLLIISRGQMLAELMRFFYGITITGTHGKTTTTAIVYKIFKLFMLDPTFINGGFLKISKENAYLGSSRYFIAEADESDRSFLYLNPIINIITNIENEHLDYYQNNIEILKETFLKFLKNIPFYGCIIICIDNIHNYDLIKQNKNILKQNIITYGFHKEADLQLYNFQENGYKSKFFLLEKKKNISLEINLSIPGYHNALNATAAFAASAYIGLDPKIIIKFLKKFEGIKRRFDILGSIPPYQKIKYKKNIIIIDDYGHHPSEINITINTTRQIWPNRKLVMIFQPHRYSRTKNLLNKFVKILSKVDKLFILNTYSAGENMLKEANSEFLTKKIKELGIINPKFIKLKNYFDIANNIYLKLTGNEILIFQGAGDINNISSLLIKNSLQKNDES
SIO_010081: GJU04_RS00715
subclass of: SO_0000673
so part of: GJU04_RS00715
location: 140679..142157
location: region:140679-142157:1
so has part: feature:140679-142157:1:exon

WP_168892996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140679-142157:1:exon

GJU04_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00720
old locus tag: GJU04_00720
so part of: sequence
location: 142197..143120
location: region:142197-143120:1
so has part: feature:142197-143120:1:exon
subclass of: SO_0000010

position:142197:1
position: 142197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143120:1
position: 143120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142197-143120:1:exon

GJU04_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00720
old locus tag: GJU04_00720
EC number: 6.3.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053739.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase
translation: MSKKIAVLFGGNSPEREISLKSGKTILNALIKLGINAIGIDTINFPLLYLKKYGFKKIFISLHGKGGEDGTIQGILDYLNIPYTGSNLLASAITMNKYLTKTIWNECGLPVIYPHYLLNKKDFIKSNYLRIEKKILKLNLPVFIKPNCNGSSLGSAKINHIDDLFNTLEKSFIYNDDILIEKYIKGEEYTVGILNKQILPPIKIEYPNSFYNYQAKYYLNTTKYYCPSGLNKSKTKELENIVLHAWKAVKCQTWGRIDVILDVNKKFQLLEINTIPGMTINSLYPLAAKKIGLSFYDLVIKILNLTK
SIO_010081: GJU04_RS00720
subclass of: SO_0000673
so part of: GJU04_RS00720
location: 142197..143120
location: region:142197-143120:1
so has part: feature:142197-143120:1:exon

WP_168892997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142197-143120:1:exon

GJU04_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00725
old locus tag: GJU04_00725
so part of: sequence
location: complement(143163..143639)
location: region:143163-143639:-1
so has part: feature:143163-143639:-1:exon
subclass of: SO_0000010

position:143163:-1
position: 143163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143639:-1
position: 143639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143163-143639:-1:exon

GJU04_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00725
old locus tag: GJU04_00725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNNKLLLINKIFQKKKYSSYTNILYKIYIRTDILIKINNFIKKYLPIELHNLYNVKNFQNNILIIETYNASSMIRFLSEKSNISYFLKKNIIPSLKKIDIKINPLFFKKTFVKDNINNKYILKKNILSKYSIKLLLNIAKKSSKNLKYTIKRFVKNI
SIO_010081: GJU04_RS00725
subclass of: SO_0000673
so part of: GJU04_RS00725
location: complement(143163..143639)
location: region:143163-143639:-1
so has part: feature:143163-143639:-1:exon

WP_168892998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143163-143639:-1:exon

GJU04_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: secA
locus tag: GJU04_RS00730
old locus tag: GJU04_00730
so part of: sequence
location: 143755..146499
location: region:143755-146499:1
so has part: feature:143755-146499:1:exon
subclass of: SO_0000010

position:143755:1
position: 143755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146499:1
position: 146499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143755-146499:1:exon

GJU04_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: secA
locus tag: GJU04_RS00730
old locus tag: GJU04_00730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005167086.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecA
translation: MLKKIFTKIFGSNNDNILRNIQKTVNIINKMEIEFEKLTNIELQNKTLYFKEKLQNNFSLEDILPEAFATVREASKRIFGMRHFDVQLIGGIVLNNNCIAEMKTGEGKTLTSTLPAYLNALNGKGVHIVTVNDYLAQRDAINNKTLFEFLGLTVGVNISSMSLKEKRNAYKADITYGTNNEYGFDFLKDNMVFNYSDKVQRNLQYAIIDEVDSILIDESRTPLIISGAAEDSSKLYIKINNIIPKLIYQSQEDSTSFQGKGHFFIDEKSRQAYLTEKGLIFLEKLLIKEKIINYGESLYTSDNIIILNHIISALRAHKLFKKNVDYILKNNKIIIVDEHTGRLMEGRRWSEGLHQAIEAKENVKINNENQTLASITFQNYFRLYKKLSGMTGTAITESFEFKEIYKLDTIVIPTNKPMIRKDLPDLIYLTKKEKIKAIIQDIKEKNLKGQPILVGTVSIKKSELISEKLKKIGIKHNILNAKFHAREAEIISKAGEKHAVTIATNMAGRGTDIVLGGAFILEKKYSFDNLKKLKIQWQIKHEEIIKLGGLYVIGTERHESRRIDNQLRGRSGRQGDPGVSRFYLSMEDSLMRIFAPKNMLFLMKKLGMKYNDYIEHPWITKAISKAQKKVENYNFDIRKQLLEYDDVINDQRLSIYSQRDQLLKSSKTEQIIKNFRIEIFTKLINSYIKSDYYTQEKWDLKKIKIYFINVFNLELPIKNWIDVYIKKNAKKISKDFFLKKIINFSEQEYLKKINNLKIKNIKISEKNIILKILDNLWKEHLAAIEYLKQGIHLRGYAQQDPKQEYKRESFHMFNMMLNTLKKEVIIILSKLEKEIIMDYCELSNILIENTKIINNNIKNNNLIMIKKKSDSSYIDKKDKYLNNINFLKKKIGRNKKCPCYSGKKYKFCHGLIIK
SIO_010081: GJU04_RS00730
subclass of: SO_0000673
so part of: GJU04_RS00730
location: 143755..146499
location: region:143755-146499:1
so has part: feature:143755-146499:1:exon

WP_168892999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143755-146499:1:exon

GJU04_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dnaJ
locus tag: GJU04_RS00735
old locus tag: GJU04_00735
so part of: sequence
location: complement(146555..147670)
location: region:146555-147670:-1
so has part: feature:146555-147670:-1:exon
subclass of: SO_0000010

position:146555:-1
position: 146555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147670:-1
position: 147670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146555-147670:-1:exon

GJU04_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dnaJ
locus tag: GJU04_RS00735
old locus tag: GJU04_00735
EC number: 1.8.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013183419.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaJ
translation: MAKKDYYDILGITRNAEDREIKRAYKRLAMKFHPDRNPGNKNAENKFKEIKEAYEILSDTKKRASYDQYGHSAFEQENISSTTDFSDIFGDVFGDIFGGNSRSKKRSRKGSDLKYIIEISLEEAIKGITKNIKIPVLKNCNYCNGTGAQGALQKCHTCNGHGQIQMSQGFFTVQQTCPRCHGQGNFIKNSCFYCKGKGKLEIYKNLSVKIPSGIDNGDRIRLNGEGESGDNGAQSGDLYIEIKIKKHFLFIRDGNNLYCELPINFITAILGGVINIPTFNGYVRLKIPEGTQTGKIFRIRNKGIKSIRRNSNFGDLLCKIIVETPINLNNEQKNILSKLDKSFQNISNYKNNPKIGKFLNSIKDFFHNIKN
SIO_010081: GJU04_RS00735
subclass of: SO_0000673
so part of: GJU04_RS00735
location: complement(146555..147670)
location: region:146555-147670:-1
so has part: feature:146555-147670:-1:exon

WP_168893000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146555-147670:-1:exon

GJU04_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dnaK
locus tag: GJU04_RS00740
old locus tag: GJU04_00740
so part of: sequence
location: complement(147789..149702)
location: region:147789-149702:-1
so has part: feature:147789-149702:-1:exon
subclass of: SO_0000010

position:147789:-1
position: 147789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149702:-1
position: 149702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147789-149702:-1:exon

GJU04_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dnaK
locus tag: GJU04_RS00740
old locus tag: GJU04_00740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053681.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaK
translation: MGKIIGIDLGTTNSCVAIIDSNKPRVLENSEGERTTPSVIAYTQDGEILVGQPAKRQAITNPKNTLFAIKRLIGRRFDDKEVQRDIKIMPYKIIKSDNGDAWIDIKGKKMAPPQISAEVLKKMKKTAEDFLGIKINEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGKGNRTVAVYDLGGGTFDISIIEIDDVDGEKTFEVLSTNGDTHLGGEDFDSRIINYLVTEFKKEQGIDLKNDPLAMQRLKESAEKAKIELSSAQQTDVNLPYITANSSGPKHLNIKLTRAKLESLVEDLIDQSIKPLKMALKDANLSTSDINDIILVGGQTRMPMVQNKVSSFFGKKPRKDVNPDEAIAIGAAVQGGVLAGDVKDVLLLDVTPLSLGIETIGGVMTTLINKNTTIPTKHSQIFSTAENNQSSVTIHVLQGERKRASDNKSLGQFNLDGISPAPRGMPQIEVTFDIDADGILHVSAKDKKSGQEQKITIQASSGLNKDEVEKMIRDAEANTESDRLFEELVKIRNEGDQLIHNTEKKLKEIDNQINKDDKILIQNSINELNKSLKKEDKNDIRTKIQKLIEISSKIINLTNNENIKKEKDNNVKNNDKENEVVDAEFEEVKDKKK
SIO_010081: GJU04_RS00740
subclass of: SO_0000673
so part of: GJU04_RS00740
location: complement(147789..149702)
location: region:147789-149702:-1
so has part: feature:147789-149702:-1:exon

WP_168893001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147789-149702:-1:exon

GJU04_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00745
old locus tag: GJU04_00745
so part of: sequence
location: 150044..151534
location: region:150044-151534:1
so has part: feature:150044-151534:1:exon
subclass of: SO_0000010

position:150044:1
position: 150044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151534:1
position: 151534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150044-151534:1:exon

GJU04_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00745
old locus tag: GJU04_00745
EC number: 3.4.11.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014500060.1
GO function: GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO process: GO:0019538 - protein metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucyl aminopeptidase
translation: MQYFAEKIILSNKNLLDCIVIPMFEKYKFSKILKKINDISNNYILNILKKNNIQGKINQHIILYKIPNFSCNKIIIIGCGNKDTLNREKNKLIINNVINILKKYSIKEIYWYLTDIKIDNYELYWNIRDTINIIEHNIYSFNKFKKSKNFFSSIIKFIITNNNENIYFSAIKHGNAINLGIKKAKNIANLPPNICTPKYLSIKTKKLIKQYNNISVEIINEKIMQKIGMNAYLAVSKGSQNKPYISIIKYQNDNKSQPIVLVGKGVTFDSGGISLKPSKNMEDMKYDMCGAAAIYGTIHAIAQLKLPLNIIAILACGENMPSSNAYRPSDVIETMSGITVEIINTDAEGRLILCDILTYIEKYNPKYVIDIATLTGACVIALGNNISGLMANNKKLSKKIIRASLEADDRVWELPINDQKYFHQLKSNIADLVNSSNGVAGAITAACFLSKFTKKYKWAHIDIAGTAWYYPNNKAMASGRPINMLCQFLINQTNHK
SIO_010081: GJU04_RS00745
subclass of: SO_0000673
so part of: GJU04_RS00745
location: 150044..151534
location: region:150044-151534:1
so has part: feature:150044-151534:1:exon

WP_168893002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150044-151534:1:exon

GJU04_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00750
old locus tag: GJU04_00750
so part of: sequence
location: 151585..154377
location: region:151585-154377:1
so has part: feature:151585-154377:1:exon
subclass of: SO_0000010

position:151585:1
position: 151585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154377:1
position: 154377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151585-154377:1:exon

GJU04_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00750
old locus tag: GJU04_00750
EC number: 6.1.1.9
inference: COORDINATES: protein motif:HMM:NF004349.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--tRNA ligase
translation: MDKIYNPKNFEKKIYNYWENNNFLKNKLNNSKKCFSIMVPPPNITGCLHIGHALQYTLIDILIRYHRMLGKNILCQVGIDHAGIATQNLIEQKIFNETGKTKNNYSKKFFLNHIWKWKDKYCNIIYNQMKSLGLSTEWEKVRFTMDNKFTKSVRDIFIILYNQGLIYKKKRLIHWDFKLKTVISDLEVEYKKKKTNIWYLRYLFQDGITTLDNKNYLTVATTRPETLLADSAIAINPLDKRYTTLVGKMVIIPIINRQIPIIADNYAKITKGTGCVKISPAHDFNDYQVAIKHNLPLIKIFDLNGNILEKCEILNNEQQKIKLNDNIPKDLQKINFLKARKIIIKKIKQNNLLDKYKTKIRLIPFSMRSNTTIIPMLTNQWYLNTRILSKNAINAVKNNKIIFFPKKYKNMFYSWMNNIQDWCISRQLWWGHRIPVWYDIKNNIYVGKNEKEIKKKYNLNKNIILKQDSDVLDTWFSSSLWTFITLDWPNNKNFYLFHPTNVIISGFDIIFFWISKMIMMTMHFVKNKDNTPQVPFKNILMTGLIRDNKGNKMSKSRGNVINPIDFIEGINSINFEKNNNFKKNNKIYGADALRFTLAALSSTGRDIYWDMTRLEGYRNFCNKIWNASIFILKNIKYEFINKKRDLSLIDQWIWSEYYLIVKYYTKALDEYRFDYAANILYNFIWNKFCDWYLEYSKIIFREKNQLKYIGTHYTLYNLFESLLRLAHPIIPFITEVIWQKIIKNKKNLLKTSIMIQSFPQVNNLEINKKTISIFNTFIHLITIIRNHKIEMNINNNIKINLYIKNINNEFNHFLKININILKKFVNLNEIFFLKKKNHFPKETLINKINNIEFGIPLNNKIIDQKNLLNQINKKLNNNEKIINFLIKNTKNKNFLSKAPKNIILKNFEKLKNCKILKKELLQKIFLIKNL
SIO_010081: GJU04_RS00750
subclass of: SO_0000673
so part of: GJU04_RS00750
location: 151585..154377
location: region:151585-154377:1
so has part: feature:151585-154377:1:exon

WP_168893003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151585-154377:1:exon

GJU04_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: argF
locus tag: GJU04_RS00755
old locus tag: GJU04_00755
so part of: sequence
location: 154431..155453
location: region:154431-155453:1
so has part: feature:154431-155453:1:exon
subclass of: SO_0000010

position:154431:1
position: 154431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155453:1
position: 155453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154431-155453:1:exon

GJU04_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: argF
locus tag: GJU04_RS00755
old locus tag: GJU04_00755
EC number: 2.1.3.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091455.1
GO function: GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine carbamoyltransferase
translation: MNQFYNKHFLKLSDFSKENIYELIKISEKLKNNKKNFKEKKKLINKNIILIFEKNSTRTRCSFEIACFDQGAHITYLNIKDSHIGNKESLKDSARILSNMYQGIGYRGKYQKNIENLAKYSTIPIWNGLTNEFHPTQILADLLTIKENIKNKKIDQIKLSYIGDINNNISFSLIEASIIIGFELCLISPQKIKSNNNFYINNIIEKMKNSNNIHITNNIDIGIKGTDFIYTDIWVSMGEKISLQLWEKKIKKLYTYQVNKLLLKKSQNKNIKVMHCLPSLHLYNHYKNLFTNEIISKYNLYNGLEITDEIFESNNSIIFQQAENKIHAIKAIMMASLLKE
SIO_010081: GJU04_RS00755
subclass of: SO_0000673
so part of: GJU04_RS00755
location: 154431..155453
location: region:154431-155453:1
so has part: feature:154431-155453:1:exon

WP_168893004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154431-155453:1:exon

GJU04_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00760
old locus tag: GJU04_00760
pseudo: true
so part of: sequence
location: <155937..156905
location: region:155937-156905:1
so has part: feature:155937-156905:1:exon
subclass of: SO_0000010

position:155937:1
position: 155937
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:156905:1
position: 156905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155937-156905:1:exon

GJU04_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00760
old locus tag: GJU04_00760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: extracellular solute-binding protein
SIO_010081: GJU04_RS00760
subclass of: SO_0000673
so part of: GJU04_RS00760
location: <155937..156905
location: region:155937-156905:1
so has part: feature:155937-156905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155937-156905:1:exon

GJU04_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00765
old locus tag: GJU04_00765
so part of: sequence
location: 157028..157100
location: region:157028-157100:1
so has part: feature:157028-157100:1:exon
subclass of: SO_0000663

position:157028:1
position: 157028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157100:1
position: 157100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157028-157100:1:exon

GJU04_RS00765
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00765
old locus tag: GJU04_00765
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:157061..157063,aa:Asn,seq:gtt)
SIO_010081: GJU04_RS00765
subclass of: SO_0000673
so part of: GJU04_RS00765
location: 157028..157100
location: region:157028-157100:1
so has part: feature:157028-157100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157028-157100:1:exon

GJU04_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: prmB
locus tag: GJU04_RS00770
old locus tag: GJU04_00770
so part of: sequence
location: 157191..158099
location: region:157191-158099:1
so has part: feature:157191-158099:1:exon
subclass of: SO_0000010

position:157191:1
position: 157191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158099:1
position: 158099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157191-158099:1:exon

GJU04_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: prmB
locus tag: GJU04_RS00770
old locus tag: GJU04_00770
EC number: 2.1.1.298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1
GO function: GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3 N(5)-glutamine methyltransferase
translation: MVIKLKYLLNKKIISELLSIQDIIRWIVSCFSISNLWYGHGSDNVWDEAINLVLPLLGLPPYLWKEIYKSRLLVKERELIYKLVYKRIKKKIPVVYLTKKAWFCGHELYIDNRVLIPRSPIAELINNRFKSVIFSNKQPKFILDLCTGSGCIAIACSYLFPNAHIDAVDISLEAINVAEYNIQLHGLENRITPICSNLFNKLTKSTYDLIITNPPYVDKKEKKYLPKEYLYEPKIGLFAKNNGMEIIDKIISQAPLYLKRDGILICEVGNKMLNVIEKYPNICFQWLDIKNGGIGIFKIENI
SIO_010081: GJU04_RS00770
subclass of: SO_0000673
so part of: GJU04_RS00770
location: 157191..158099
location: region:157191-158099:1
so has part: feature:157191-158099:1:exon

WP_168893006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157191-158099:1:exon

GJU04_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: aroC
locus tag: GJU04_RS00775
old locus tag: GJU04_00775
so part of: sequence
location: 158145..159215
location: region:158145-159215:1
so has part: feature:158145-159215:1:exon
subclass of: SO_0000010

position:158145:1
position: 158145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159215:1
position: 159215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158145-159215:1:exon

GJU04_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: aroC
locus tag: GJU04_RS00775
old locus tag: GJU04_00775
EC number: 4.2.3.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126766.1
GO function: GO:0004107 - chorismate synthase activity [Evidence IEA]
GO process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate synthase
translation: MSGNSIGKLFKVTTFGESHGKSLGCIIDGVPPKIPLKTQDIQKDLDRRKPGQSKYTSPRKELDQIQILSGIFNNFTTGTSIGLLINNMDVRSKDYNNIKNIFRPGHADYTYAKKYGIRDYKGGGRSSARETTMRVAAGAIAKKYLLIKYNLKIRGYLSQIGDIICNFDNWAEVNKNPFFCPNKYQIKDLQNMINILKKTGNSIGAKITIIAENVPIGLGEPVFDKLDAELAHAIMSINAVKGIEIGDGFNSINKLGSNYRDEMDKNGFKSNNSGGILGGISTGQNIILNFVVKPTSSIAIPGKTINSVGEEITCITQGRHDPCVGIRAVPIGEAMVAIILMDHLLRYRAQCIDIIK
SIO_010081: GJU04_RS00775
subclass of: SO_0000673
so part of: GJU04_RS00775
location: 158145..159215
location: region:158145-159215:1
so has part: feature:158145-159215:1:exon

WP_168893007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158145-159215:1:exon

GJU04_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00780
old locus tag: GJU04_00780
so part of: sequence
location: complement(159240..159845)
location: region:159240-159845:-1
so has part: feature:159240-159845:-1:exon
subclass of: SO_0000010

position:159240:-1
position: 159240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159845:-1
position: 159845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159240-159845:-1:exon

GJU04_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00780
old locus tag: GJU04_00780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005160596.1
GO function: GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redoxin domain-containing protein
translation: MILVTKKAPDFTTSAVLPDGSIIDNFNLYEYSKNKITILFFWPLDFTFVCPTEIISLNQHYNSFYKRNVRILGISCDSQFVHQAWRNTPINKGGIGHIKFIMISDITKNIQKSYGIEHPQLGIALRALFLIDKKGIIRHQLINDLQFGRNINEIIRIIDALKHNEKYGDVCPAQWEKGKKSITPNSQGIINYLSNNINELY
SIO_010081: GJU04_RS00780
subclass of: SO_0000673
so part of: GJU04_RS00780
location: complement(159240..159845)
location: region:159240-159845:-1
so has part: feature:159240-159845:-1:exon

WP_168893008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159240-159845:-1:exon

GJU04_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00785
old locus tag: GJU04_00785
so part of: sequence
location: complement(160016..161050)
location: region:160016-161050:-1
so has part: feature:160016-161050:-1:exon
subclass of: SO_0000010

position:160016:-1
position: 160016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161050:-1
position: 161050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160016-161050:-1:exon

GJU04_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00785
old locus tag: GJU04_00785
inference: COORDINATES: protein motif:HMM:NF017026.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase
translation: MYNLSPINKYFLSLFKNKFLNKKVIFAGNINDKIPIYLNTFKSFINTHNYNYYIWLKKKINNNYLYYGLMDNKYKNYNFDVLIFFWLKDKKESLFILNNILSLLSLRVEIFIIGSNNCGIKKINNIKELEILNLQKIFNVRKHVVFHGILTKNVYFNINNYWNYYYYDNYRIYSLPGVFGGKKIDNGSQLLISTINDCIFIKGKILDLGCGSGIISTAIQKSLKKKHLIYAIDVDAKAIYSTIKTFNKNIIKNINVFPSNIYSNIQEKFDFIISNPPIHKNLSFSLDFIYQMINNFKKNINYKGELLFVTNNFISYKKIFNNFSLKIYILSKNKNFSVYRIKNI
SIO_010081: GJU04_RS00785
subclass of: SO_0000673
so part of: GJU04_RS00785
location: complement(160016..161050)
location: region:160016-161050:-1
so has part: feature:160016-161050:-1:exon

WP_168893009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160016-161050:-1:exon

GJU04_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00790
old locus tag: GJU04_00790
so part of: sequence
location: complement(161056..161892)
location: region:161056-161892:-1
so has part: feature:161056-161892:-1:exon
subclass of: SO_0000010

position:161056:-1
position: 161056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161892:-1
position: 161892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161056-161892:-1:exon

GJU04_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00790
old locus tag: GJU04_00790
EC number: 3.6.1.41
inference: COORDINATES: protein motif:HMM:NF001204.0
GO function: GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: symmetrical bis(5'-nucleosyl)-tetraphosphatase
translation: MTTYFIGDIHGHYNEFISLLRKINFDYKNDKLWITGDLIARGPDSIKVLYFLYSIQKSIKLVLGNHDLYLIFLILNQKNNNINDTKTLNLLKNKKIIFIINTWLKYQPLIQYDKKKKILMSHAGIPPQWNNIEIILSAANEAKNIISSKNNSFFLDYINNEKYQINDWKNNTLIGFKRFNYIINGLTKMRYCYLDGTLEMLTKKAPNDIQSKILKPWFWIPNILYKQYTIFFGHWSDLQGGQYTQKNIIGLDTGCCWGKKLTIYSWEKKQFYNVNCNI
SIO_010081: GJU04_RS00790
subclass of: SO_0000673
so part of: GJU04_RS00790
location: complement(161056..161892)
location: region:161056-161892:-1
so has part: feature:161056-161892:-1:exon

WP_168893010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161056-161892:-1:exon

GJU04_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: apaG
locus tag: GJU04_RS00795
old locus tag: GJU04_00795
so part of: sequence
location: complement(161915..162295)
location: region:161915-162295:-1
so has part: feature:161915-162295:-1:exon
subclass of: SO_0000010

position:161915:-1
position: 161915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162295:-1
position: 162295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161915-162295:-1:exon

GJU04_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: apaG
locus tag: GJU04_RS00795
old locus tag: GJU04_00795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013507825.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Co2+/Mg2+ efflux protein ApaG
translation: MKSLLSQVYIKTNSIYIKSQSIPTVNRYVFTYTITIHNLGKKILQLISRYWSITNGNGKKNQIYGEGIISKKPYIKPGNNFHYTNITILETPVGIIEGHYIMIDENNHVYHVEIPIFRLAIKTYIH
SIO_010081: GJU04_RS00795
subclass of: SO_0000673
so part of: GJU04_RS00795
location: complement(161915..162295)
location: region:161915-162295:-1
so has part: feature:161915-162295:-1:exon

WP_168893011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161915-162295:-1:exon

GJU04_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rsmA
locus tag: GJU04_RS00800
old locus tag: GJU04_00800
so part of: sequence
location: complement(162300..163097)
location: region:162300-163097:-1
so has part: feature:162300-163097:-1:exon
subclass of: SO_0000010

position:162300:-1
position: 162300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163097:-1
position: 163097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162300-163097:-1:exon

GJU04_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rsmA
locus tag: GJU04_RS00800
old locus tag: GJU04_00800
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499858.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MKIIFKKKYGQHILVNEKIIQQIISFINPKYYQIMLEIGPGLGALTIPMIKYNKNLSIIEIDKNFFNILKKNKILINSNINILLNNILNFNFLILTQKYKKRIRIFGSLPYNISITIIFYLFKYLNNIKDMNFIMQKEVVNRLIAYPGGKNYGCLSIIAQLFCKIKSLIEIKANAFFPKPKIISNMVFLRPYINNPYNLNNIFFLKKIIKQAFSMRRKILRNSLINLFSIEELNYLGIDYKIRAEDVSISEYCQLANWLEFNKRL
SIO_010081: GJU04_RS00800
subclass of: SO_0000673
so part of: GJU04_RS00800
location: complement(162300..163097)
location: region:162300-163097:-1
so has part: feature:162300-163097:-1:exon

WP_168893012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162300-163097:-1:exon

GJU04_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00805
old locus tag: GJU04_00805
so part of: sequence
location: complement(163184..164461)
location: region:163184-164461:-1
so has part: feature:163184-164461:-1:exon
subclass of: SO_0000010

position:163184:-1
position: 163184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164461:-1
position: 164461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163184-164461:-1:exon

GJU04_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00805
old locus tag: GJU04_00805
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:NF025002.2
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MIIKKIIYIIILYFCLFNISQCMSMKNINNIKIIINDDVILKNKIDEILSITKKIYNSKYPILYSFLDIKNTKDVIEYFIFLNIIKNNNFFLSEDDFDNIILNIYQSNNIDENLLKKNFLLKNINYKKFYKIFKNIILINVLKNKFLLENFNIYDEELDSLSNRLYLKEKTHKTYNITLFYFLINKDSLKNKFNHKIYLLKQLILLLKNKKLKNNLKNYNEKTFISYFQIKKKNLKNKKENQLLKNVINYLDNAKKNDIIGPIYLNSKLFILKINNIFIKNNIDNEKVLLRFIYIKKKNLSNKDFNKKIKDIYFNLLKKRITFQKAIELFSDDVLSIRFKNNKNWILLNNFSSKFKKIITKLKINEFSLPIQESDGAFIIQLLDKNNKLFLRKKAYEIILQENIEREANLFIFTYAKKIYVKIFN
SIO_010081: GJU04_RS00805
subclass of: SO_0000673
so part of: GJU04_RS00805
location: complement(163184..164461)
location: region:163184-164461:-1
so has part: feature:163184-164461:-1:exon

WP_168893013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163184-164461:-1:exon

GJU04_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: djlA
locus tag: GJU04_RS00810
old locus tag: GJU04_00810
so part of: sequence
location: 164604..165518
location: region:164604-165518:1
so has part: feature:164604-165518:1:exon
subclass of: SO_0000010

position:164604:1
position: 164604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165518:1
position: 165518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164604-165518:1:exon

GJU04_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: djlA
locus tag: GJU04_RS00810
old locus tag: GJU04_00810
inference: COORDINATES: protein motif:HMM:NF006948.0
GO function: GO:0051087 - chaperone binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone DjlA
translation: MFSYLQLLFFLINLIINYYISFNLLNIIILILISYLINKITKFYNKKYNYYYKNNIQKLFLQINFEVMGYISKSKGFISKNDINFTIKLIKKMNLNNVEINFVKKAFNNGKKKNYPLIYKLNNLNYLIYNNRNLINKFLETQIELSFINNFLNNKNKKILNIIFQELNISFIDLFFIIKKLKYNNKFINEKDLFDNYYDQNQKKTKYYYNNYEFYYEKNNFNNKNNNFNNKNNYESELDKAYKLLGINYNDNLLTIKRAYHKLISKYHPDKLISKGYSSKQLEIAKIKTQNIHKAYDIIKKHIT
SIO_010081: GJU04_RS00810
subclass of: SO_0000673
so part of: GJU04_RS00810
location: 164604..165518
location: region:164604-165518:1
so has part: feature:164604-165518:1:exon

WP_168893014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164604-165518:1:exon

GJU04_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: acpS
locus tag: GJU04_RS00815
old locus tag: GJU04_00815
so part of: sequence
location: complement(165527..165913)
location: region:165527-165913:-1
so has part: feature:165527-165913:-1:exon
subclass of: SO_0000010

position:165527:-1
position: 165527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165913:-1
position: 165913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165527-165913:-1:exon

GJU04_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: acpS
locus tag: GJU04_RS00815
old locus tag: GJU04_00815
EC number: 2.7.8.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053773.1
GO function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0008610 - lipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: holo-ACP synthase
translation: MKIFGIGIDIVEINRIKKIFIRFGKRFAHKILTKYELDVYKKNNNKIKILAKYFSVKEATVKALNTGFSNGIFFNQIELSHYLTGKPKLKLYNQALKFLKNTVYKYKIHISLSDEKKYTCAIVIIEKK
SIO_010081: GJU04_RS00815
subclass of: SO_0000673
so part of: GJU04_RS00815
location: complement(165527..165913)
location: region:165527-165913:-1
so has part: feature:165527-165913:-1:exon

WP_168893015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165527-165913:-1:exon

GJU04_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: era
locus tag: GJU04_RS00820
old locus tag: GJU04_00820
so part of: sequence
location: complement(165952..166779)
location: region:165952-166779:-1
so has part: feature:165952-166779:-1:exon
subclass of: SO_0000010

position:165952:-1
position: 165952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166779:-1
position: 166779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165952-166779:-1:exon

GJU04_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: era
locus tag: GJU04_RS00820
old locus tag: GJU04_00820
EC number: 3.6.5.-
inference: COORDINATES: protein motif:HMM:TIGR00436.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]; GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase Era
translation: MKTISSYYGSILILGRSNSGKSTLLNTLVGKKISIISHKINTTNYSIIGVYNKNSYQIEYIDTPGNIFYNNKILNSLKHNKYNYIFFILDRNRWNYIEKKFVKIFNKINIPVILIINKIDKINNKSILLPYINFLKKKIKFIYLFMISAKYKLYTNDINNIICKKLPKKKHNYPQNYITNQTEKFIFKEIIRESIIKYIHKELPYLINIKINYLKKLKILPDKINVLFLIKNIHQRKIIIGKNSIIIKLIKYRSEKKIEKFFKKKINLNLWIKIQ
SIO_010081: GJU04_RS00820
subclass of: SO_0000673
so part of: GJU04_RS00820
location: complement(165952..166779)
location: region:165952-166779:-1
so has part: feature:165952-166779:-1:exon

WP_168893016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165952-166779:-1:exon

GJU04_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rnc
locus tag: GJU04_RS00825
old locus tag: GJU04_00825
so part of: sequence
location: complement(166809..167489)
location: region:166809-167489:-1
so has part: feature:166809-167489:-1:exon
subclass of: SO_0000010

position:166809:-1
position: 166809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167489:-1
position: 167489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166809-167489:-1:exon

GJU04_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rnc
locus tag: GJU04_RS00825
old locus tag: GJU04_00825
EC number: 3.1.26.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1
GO function: GO:0004525 - ribonuclease III activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease III
translation: MNFIMINQLQKRLGYIFIHQDLLYQALTHRSASSKHNERLEFLGDSILSYIIAKALYNKFPSVNEGNMSRMRASLVRGNTLASIAREFNLGEYLFLGPGEFKNGGYNRESILADTMEALIGSICLDSNIKVVEKIILLWYQFRLKKILPGNNQKDPKTRLQEYLQRSHLPLPYYFIIQINGEVHNQKFTIQCKISGISAIIIGIGSSRRKAEQSAAEKALKKLGLE
SIO_010081: GJU04_RS00825
subclass of: SO_0000673
so part of: GJU04_RS00825
location: complement(166809..167489)
location: region:166809-167489:-1
so has part: feature:166809-167489:-1:exon

WP_168893017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166809-167489:-1:exon

GJU04_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lepB
locus tag: GJU04_RS00830
old locus tag: GJU04_00830
so part of: sequence
location: complement(167540..168301)
location: region:167540-168301:-1
so has part: feature:167540-168301:-1:exon
subclass of: SO_0000010

position:167540:-1
position: 167540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168301:-1
position: 168301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167540-168301:-1:exon

GJU04_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lepB
locus tag: GJU04_RS00830
old locus tag: GJU04_00830
EC number: 3.4.21.89
inference: COORDINATES: protein motif:HMM:NF021981.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MLKKKYWIKQIGFLLPIILLVFIIRSFIYEPFYIPSNSMMPTLLEGDFILVNKFIYGIKNPLNNKIIFKNTIPKRGDIVVFKYPKNIKINYIKRIIGLPGDTIVYDFKNKQIILLKSKNFQKNIFKYKKLKKSKFIKIFKNSKEYYILGGLRLFQYTEYIDKLSHKILFMPELENETLNIYKQKNVPLYTWIIPKNYYFVMGDNRDDSFDSRYWGLVHKKYLLGKAILIWLNVQKKSNSWFFKIRFNRIHKVN
SIO_010081: GJU04_RS00830
subclass of: SO_0000673
so part of: GJU04_RS00830
location: complement(167540..168301)
location: region:167540-168301:-1
so has part: feature:167540-168301:-1:exon

WP_168893018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167540-168301:-1:exon

GJU04_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lepA
locus tag: GJU04_RS00835
old locus tag: GJU04_00835
so part of: sequence
location: complement(168451..170241)
location: region:168451-170241:-1
so has part: feature:168451-170241:-1:exon
subclass of: SO_0000010

position:168451:-1
position: 168451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170241:-1
position: 170241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168451-170241:-1:exon

GJU04_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lepA
locus tag: GJU04_RS00835
old locus tag: GJU04_00835
EC number: 3.6.5.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018345454.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor 4
translation: MKNIRNFSIIAHIDHGKSTFADRLIELCGGLSHREMTSQVLDTMDLERERGITIKAQSVSLNYKAKNNNFYKLNFIDTPGHVDFSYEVSRSLSACEGALLLIDASQGIEAQTLSNYNTALKMGLKVLPVINKIDLLTVNIKKIQKDIQDIIGIKSKEILKCSAKTGLGIQEIIEDLVKNIPYPKGNINHSLQALIIDSWFDNYLGVIVLICIKNGQISKGMKIIVLNTKKKYVVEKIGIFTPKKINLNILKCGDVGWIVLGIKNISEVPVGATITSYIKPSTILLPGFKKSVPKVFAGLFPIISDEYKIFSNALKKLSLNDSALFFEPENSEILGYGYRCGFLGLLHMEIIQQRLLNEYNINIITTMPSVKYEVITINKDILYIDNPSKFPPSFLIKEIREPILKCKIISPIKYIGKIIQLCITKNGIQKDIIYHGNQVILIYEIPMLEVIINFFDKLKSITKGYGSLDYNFIKFKKSDLICINILINKKNVDALTTITYKKKIYSYSRILVEKIKTLIPRQQFDITIQAIIGKKIISSTNIKQLRKNVIAKCYGGDVSRKKKLIQKQKEGKKRMKKIGNIKLPTSVFLAMLKINK
SIO_010081: GJU04_RS00835
subclass of: SO_0000673
so part of: GJU04_RS00835
location: complement(168451..170241)
location: region:168451-170241:-1
so has part: feature:168451-170241:-1:exon

WP_168893019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168451-170241:-1:exon

GJU04_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00840
old locus tag: GJU04_00840
so part of: sequence
location: complement(170294..172342)
location: region:170294-172342:-1
so has part: feature:170294-172342:-1:exon
subclass of: SO_0000010

position:170294:-1
position: 170294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172342:-1
position: 172342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170294-172342:-1:exon

GJU04_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00840
old locus tag: GJU04_00840
EC number: 3.4.24.-
inference: COORDINATES: protein motif:HMM:NF013591.2
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M3 family metallopeptidase
translation: MSNPLLSDFLIPPFNKITNDCMIPAIEITIKNSKNKINQILNKYKHNYNWENFCQKILELDENLYRIFSPINHLYYVCNNNKIRKNYEIIIKMITNYHIWITQNINLYNAYIKLQNNQENLNFNKFKIESLNKIICDFKFSGILLSQEKKKKYVKYVTYLLELQNIFNNNIFDSTKRLEKHILDKKELNGIPNHIMNIMHKNAILKNKKGYLITFDFPIYSSIITFCKNNILRKKIYYMYNTRASDLDQNKSKFNNEPIIIKELSLRVKLSKLLGYNSYSEQSLVMKSAKKVDKVLSFLYKLIKLSKKQAEKEVLNLKNFIKKKYNLVKINPWDIAFFSEKYKFYLYGIDDNIIRDYFPINIVMKGMFNIINKIYGLIFKQRKVSVWHKDVLFFDVFNSKDKFYGSIYFDLYIRPEKRSGAWMDICQTRILKENGIIQYPIAYVNCNFTPSYNKFFLLNHDEVLTLFHEFGHALHHITSQINISNISGINGIPLDIVEFPSQFMEYWCWEARSLQLISQHYKKKNNLPENIIHKLIKSKKYNAALLLMRQIELSLFDIRIHDEFNLNKKKQISDLIQEIRKNLITISPMPVWYKYTNVFNHIFGGEYAAGYYSYLWAEQLAADSFLYFKKYGLFNQIIGRKFLNNLLSLGSSQDPLVLFKKFRGKELNINSILIQRGINYNE
SIO_010081: GJU04_RS00840
subclass of: SO_0000673
so part of: GJU04_RS00840
location: complement(170294..172342)
location: region:170294-172342:-1
so has part: feature:170294-172342:-1:exon

WP_168893020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170294-172342:-1:exon

GJU04_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rlmB
locus tag: GJU04_RS00845
old locus tag: GJU04_00845
so part of: sequence
location: complement(172412..173167)
location: region:172412-173167:-1
so has part: feature:172412-173167:-1:exon
subclass of: SO_0000010

position:172412:-1
position: 172412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173167:-1
position: 173167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172412-173167:-1:exon

GJU04_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rlmB
locus tag: GJU04_RS00845
old locus tag: GJU04_00845
inference: COORDINATES: protein motif:HMM:TIGR00186.1
GO function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
translation: MKDIIFGIHSVISLLKKNPLSLKEIFILDSKKKSNKIKELFYYINKYNINIHKVNKKWLNKKTNNSIHQGIMAVINISKSLTEKDIIKIINISKRIFILILDSITDTHNLGACIRNAVAFNVSMIILPKKNSVKINAIVKKISCGTSEDIPIIFVKNLKNTIDLLKYYKIKIIGADNNKKNSIIYNNKLKYPICLIIGSEDKGIKTTIKKKCDLLISIPMFNNLNSLNVSVATGICLFEIMRQNFIFKLKN
SIO_010081: GJU04_RS00845
subclass of: SO_0000673
so part of: GJU04_RS00845
location: complement(172412..173167)
location: region:172412-173167:-1
so has part: feature:172412-173167:-1:exon

WP_168893021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172412-173167:-1:exon

GJU04_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: miaA
locus tag: GJU04_RS00850
old locus tag: GJU04_00850
so part of: sequence
location: complement(173257..174207)
location: region:173257-174207:-1
so has part: feature:173257-174207:-1:exon
subclass of: SO_0000010

position:173257:-1
position: 173257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174207:-1
position: 174207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173257-174207:-1:exon

GJU04_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: miaA
locus tag: GJU04_RS00850
old locus tag: GJU04_00850
EC number: 2.5.1.75
inference: COORDINATES: protein motif:HMM:TIGR00174.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MNKKNKKLPIVIFLMGTTASQKTYLATRLAKILPIELISVDSSLIYKKLDIGTDKPKKNDFFYEKHWLIDIKEPYQLYSVMEFYNDVLNIMNEIVKRGKIPFLVGGNMFYYNKLINTISPLLPASNLKIRKIITNQIKNKLYKSYHDMLKTVDIISANKIHCNDIQRNLRALEIFFLTGKPLSELQKNIGIKIPYKIYQFGLTYYNRKILYKNIENRIFKMLESGFEKEVRYLIKNKYLKFDFPAIRCIGYKQMFLYILDKISYQEMIQKTTISTRHLAKKQLTWLRYWKNIYWFDSNNIYKAYDFIIKFIKEKLN
SIO_010081: GJU04_RS00850
subclass of: SO_0000673
so part of: GJU04_RS00850
location: complement(173257..174207)
location: region:173257-174207:-1
so has part: feature:173257-174207:-1:exon

WP_168893022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173257-174207:-1:exon

GJU04_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mutL
locus tag: GJU04_RS00855
old locus tag: GJU04_00855
so part of: sequence
location: complement(174216..175910)
location: region:174216-175910:-1
so has part: feature:174216-175910:-1:exon
subclass of: SO_0000010

position:174216:-1
position: 174216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175910:-1
position: 175910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174216-175910:-1:exon

GJU04_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mutL
locus tag: GJU04_RS00855
old locus tag: GJU04_00855
inference: COORDINATES: protein motif:HMM:TIGR00585.2
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutL
translation: MSIKILPKNVIKRIAAGEVIDRPATVIKELIENSIDAKASQINLCIKKGGMKYIYINDNGIGMNKKNLILCIKKHATSKINNLDDLDCFKSFGFRGEALTSIKTISRMTITSKTLKQHIAWQLYTEGFNEKIIYLKPISHPIGTTIILSDLFYNFPARRSYLSSEKIEFIYIKNIIKKIILMKFGIGIQFKYNNKIIYNFKKVTDNISYSNRIKIICGNFFLQNSLKINVFDKKLGLYGWIVLFKKDNVTNTLFKYFYVNNRIVSTNFIYRIIKEIIYGYFNNNYSFSFIFFLKLEPNQIDINIHPQKNDICFYNIKIIYNFIFKNIKKLLLKNNLISNIKNINLIKKNEKNLEYYSVKNKLSITNQLLFNNIKKKNIVYLDNLPNFYFKNFGKFLTIFKNTYIIIEKKNFLYSILIKKIIFLLLNIKFKLHLKNKNIINSIKTNIKINIKEKEYYILYKIKIFLIQLGFNLKLSNKNFICILCVPIFLSLYDIKDFFFKLLNYFINIKKISLNKIKKWIINYIINMHILWDSSKIINLLMELELLKLEENNFSIKKLFCLIKI
SIO_010081: GJU04_RS00855
subclass of: SO_0000673
so part of: GJU04_RS00855
location: complement(174216..175910)
location: region:174216-175910:-1
so has part: feature:174216-175910:-1:exon

WP_168893023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174216-175910:-1:exon

GJU04_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00860
old locus tag: GJU04_00860
so part of: sequence
location: complement(175972..176045)
location: region:175972-176045:-1
so has part: feature:175972-176045:-1:exon
subclass of: SO_0000663

position:175972:-1
position: 175972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176045:-1
position: 176045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175972-176045:-1:exon

GJU04_RS00860
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00860
old locus tag: GJU04_00860
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(176009..176011),aa:Gly,seq:gcc)
SIO_010081: GJU04_RS00860
subclass of: SO_0000673
so part of: GJU04_RS00860
location: complement(175972..176045)
location: region:175972-176045:-1
so has part: feature:175972-176045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175972-176045:-1:exon

GJU04_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: orn
locus tag: GJU04_RS00865
old locus tag: GJU04_00865
so part of: sequence
location: complement(176099..176668)
location: region:176099-176668:-1
so has part: feature:176099-176668:-1:exon
subclass of: SO_0000010

position:176099:-1
position: 176099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176668:-1
position: 176668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176099-176668:-1:exon

GJU04_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: orn
locus tag: GJU04_RS00865
old locus tag: GJU04_00865
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874522.1
GO function: GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligoribonuclease
translation: MQINNHLLIWLDLEMTGLNPNKDHIIEIAIVITDNNLEIINKGIVIPIYQSDNILNYMDSWNKNIHKKTGLIKKIKNSKFNEKKAEIYILNLLKSYIKPNTVPLCGNSIYKDRMFLYNYMPNLEKYFHYRNIDISSIKELIKRWKPKIYSKLKQKKYQHSAYYDICESINELKFYKNFIFNNKIISKID
SIO_010081: GJU04_RS00865
subclass of: SO_0000673
so part of: GJU04_RS00865
location: complement(176099..176668)
location: region:176099-176668:-1
so has part: feature:176099-176668:-1:exon

WP_168893024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176099-176668:-1:exon

GJU04_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: asd
locus tag: GJU04_RS00870
old locus tag: GJU04_00870
so part of: sequence
location: 176775..177647
location: region:176775-177647:1
so has part: feature:176775-177647:1:exon
subclass of: SO_0000010

position:176775:1
position: 176775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177647:1
position: 177647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176775-177647:1:exon

GJU04_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: asd
locus tag: GJU04_RS00870
old locus tag: GJU04_00870
EC number: 4.1.1.65
inference: COORDINATES: protein motif:HMM:TIGR00163.1
GO function: GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: archaetidylserine decarboxylase
translation: MKKKLYIYIQNLLPKLLITKFFSYISKKKLSIITTFFIFLFIKIYKINMKETKYPNIFYYKTFNKFFIRKLNMNNRPIDNNKHHIIQNTDGIINQLGIIKKNKLFQFKGCEYSLYDLLGQNNNINKIFTNGYFINIYLSPKNYHRIHMSYNGFLLKMIYIPGKLFPVNNIFSENLCNLFILNERVIFLFKTSFGFMVKILIGAQIVGNIYNSWSGLVISSRRNKIKTWNWPYIKNFYKKDSIFLKKGEEMGYFNLGSTVITLFPPKTIKFNPVLKKGLNIKIGELLAYII
SIO_010081: GJU04_RS00870
subclass of: SO_0000673
so part of: GJU04_RS00870
location: 176775..177647
location: region:176775-177647:1
so has part: feature:176775-177647:1:exon

WP_168893025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176775-177647:1:exon

GJU04_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: epmA
locus tag: GJU04_RS00875
old locus tag: GJU04_00875
so part of: sequence
location: complement(177671..178639)
location: region:177671-178639:-1
so has part: feature:177671-178639:-1:exon
subclass of: SO_0000010

position:177671:-1
position: 177671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178639:-1
position: 178639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177671-178639:-1:exon

GJU04_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: epmA
locus tag: GJU04_RS00875
old locus tag: GJU04_00875
EC number: 6.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014500246.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor P--(R)-beta-lysine ligase
translation: MKNLNYLTSAKINDLIKRAIIIKKIRNFFDKKKFIEVETPILTQFENTNLFLQQFSTNFINIKNKKKLFLITSPEFHMKRILASKINSSIYQICHSFRNGELGQYHNPEFTMLEWYHKNYNLKQLMEEIDNFFVEFGFNQLKRYSYKKIFFKYFKINPFNISKKKLLFLIKKIGFVKNKNSTFITDNYLQMLFDLYIVPKLGLKSPVLIYNFPSSQKTTETINIKNKNIANRFEVFFKGVELGNGFHELTNYKEQKKRFNEDNNKRKLIGLPIKKIDIYLLKAIKHGIPNYSGMAIGLDRFIMFLLKKKSIHKSISFSIKNA
SIO_010081: GJU04_RS00875
subclass of: SO_0000673
so part of: GJU04_RS00875
location: complement(177671..178639)
location: region:177671-178639:-1
so has part: feature:177671-178639:-1:exon

WP_168893026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177671-178639:-1:exon

GJU04_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: efp
locus tag: GJU04_RS00880
old locus tag: GJU04_00880
so part of: sequence
location: complement(178666..179232)
location: region:178666-179232:-1
so has part: feature:178666-179232:-1:exon
subclass of: SO_0000010

position:178666:-1
position: 178666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179232:-1
position: 179232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178666-179232:-1:exon

GJU04_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: efp
locus tag: GJU04_RS00880
old locus tag: GJU04_00880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004873942.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor P
translation: MVNYYSNNFRIGMKFIFLNQPYIIESSEFVKPGKGQAFVRIKMRNLITEKLIDKTFKSTDNLDTADILEKKLKYLYNEKNYFYYFMDKKNFEQIIIHSKIIKNKKKWLITQYDYIITFWNQLPIFLTLPNFINLKVVNTNIILKGDAVNNNKQAIISNGEIIKVPSFIKIGDIIKIDTRKKKYISRFK
SIO_010081: GJU04_RS00880
subclass of: SO_0000673
so part of: GJU04_RS00880
location: complement(178666..179232)
location: region:178666-179232:-1
so has part: feature:178666-179232:-1:exon

WP_168893027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178666-179232:-1:exon

GJU04_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00885
old locus tag: GJU04_00885
so part of: sequence
location: 179299..180276
location: region:179299-180276:1
so has part: feature:179299-180276:1:exon
subclass of: SO_0000010

position:179299:1
position: 179299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180276:1
position: 180276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179299-180276:1:exon

GJU04_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00885
old locus tag: GJU04_00885
inference: COORDINATES: protein motif:HMM:TIGR00238.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KamA family radical SAM protein
translation: MKELWLQQLSNNIDNNLDLIKLTEINKKDNNQFLYKKKNIFFKVKIPLVFINKIEKKNSKDPILLQFIFNEKELIQHKKYNSNPLNEKFIIPGMIHKYKNRVLILVTGICAVHCRYCFRKNTKQANSITICNWNQIINYIKKNFEINEIIFSGGDPLILNDNKIKYFINDINKISHIKILRIHTRIICILPQRISKNLLKIFSKCKFHIIIVTHINHPNEISDELFEKIYFLKKRGITILNQSVLLKNINDNYKILIKLSNSLFNIGILPYYLHLLDKVEGSKHFYVSENKAKKIMKKILLSLSGFLVPRLTKDIYGGKNKKFII
SIO_010081: GJU04_RS00885
subclass of: SO_0000673
so part of: GJU04_RS00885
location: 179299..180276
location: region:179299-180276:1
so has part: feature:179299-180276:1:exon

WP_168893028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179299-180276:1:exon

GJU04_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: groL
locus tag: GJU04_RS00890
old locus tag: GJU04_00890
so part of: sequence
location: complement(180401..182047)
location: region:180401-182047:-1
so has part: feature:180401-182047:-1:exon
subclass of: SO_0000010

position:180401:-1
position: 180401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182047:-1
position: 182047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180401-182047:-1:exon

GJU04_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: groL
locus tag: GJU04_RS00890
old locus tag: GJU04_00890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MAAKDVKFGNDARVKMLRGVNVLADAVKITLGPKGRNVVLDKSFGAPAITKDGVTVAREIELEDKFENMGAQMVKEVASKANDVAGDGTTTASVLAQSIVSEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKVISVPCSDSKSIAQVGTISANADETVGNLIAQAMERVGKEGVITVEEGTGLQDELDVVEGMQFDRGYLSPYFINKTESGTVELDNPYILLVDKKLSNIREILPILEMVAKSSKSLLIIAEDVDGEALATLVVNTMRGVVKVAAVKAPGFGDRRKAMLQDIAILTGGNVISEEIGLELEKATLEDLGQAKRIVINKDTTTIIDGVGKQNDISGRVNQIRQEIDEATSDYDREKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAAKLMNLTGQNEDQNMGIKVALRAMEAPLRQIVSNAGEEPSVIANNVKDGHGNYGYNAANEEYGDMIKFGILDPTKVTRSALQYSASVAGLMITTECMVTDLPKDEKSEISNTPPGGMGGGMGGMM
SIO_010081: GJU04_RS00890
subclass of: SO_0000673
so part of: GJU04_RS00890
location: complement(180401..182047)
location: region:180401-182047:-1
so has part: feature:180401-182047:-1:exon

WP_168893029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180401-182047:-1:exon

GJU04_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00895
old locus tag: GJU04_00895
so part of: sequence
location: complement(182125..182415)
location: region:182125-182415:-1
so has part: feature:182125-182415:-1:exon
subclass of: SO_0000010

position:182125:-1
position: 182125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182415:-1
position: 182415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182125-182415:-1:exon

GJU04_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00895
old locus tag: GJU04_00895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006814338.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MNIRPLHDRVIVKRKEVESKSSGGIVLTGSAAGKSTRGEVLAVGKGRILDNGTVKPLDVKKGDTIIFNDGYSVKTEKIDDEEVLIMSESDILAIIK
SIO_010081: GJU04_RS00895
subclass of: SO_0000673
so part of: GJU04_RS00895
location: complement(182125..182415)
location: region:182125-182415:-1
so has part: feature:182125-182415:-1:exon

WP_168893030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182125-182415:-1:exon

GJU04_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00900
old locus tag: GJU04_00900
so part of: sequence
location: 182697..182769
location: region:182697-182769:1
so has part: feature:182697-182769:1:exon
subclass of: SO_0000663

position:182697:1
position: 182697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182769:1
position: 182769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182697-182769:1:exon

GJU04_RS00900
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00900
old locus tag: GJU04_00900
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:182730..182732,aa:Phe,seq:gaa)
SIO_010081: GJU04_RS00900
subclass of: SO_0000673
so part of: GJU04_RS00900
location: 182697..182769
location: region:182697-182769:1
so has part: feature:182697-182769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182697-182769:1:exon

GJU04_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00905
old locus tag: GJU04_00905
so part of: sequence
location: complement(182857..184164)
location: region:182857-184164:-1
so has part: feature:182857-184164:-1:exon
subclass of: SO_0000010

position:182857:-1
position: 182857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184164:-1
position: 184164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182857-184164:-1:exon

GJU04_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00905
old locus tag: GJU04_00905
inference: COORDINATES: protein motif:HMM:NF024895.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MKKITIIFIMMIMNIYNIANAESNFKDYWYFGSKFGLSQYDNIKLLGKDIDDKEYTVFNKIGNGLFFGYQSNNFLGFEMGFDWLGSIKKNIEDKNTTNFFESKGIQLTSNVRYPIFKNVYLYSRLGGLFTQSINQQYDKNDYNKNINNKYYNISPLMVLGGEYIINNNFSSRVEYQFAGNIGNQDDDNLGQKTNNSMFTFSLVYKFTDKYHLPSIKSLIKKAKNNYYNNYGNNDILSKTKVYFDSNKILLGKQNKKKLDKILDINIKNKNLSKDNDNKIVILGHSDYLEKDSNSILSQKRAQQIVEYLKSKDKNLLKKIIFVKGLGSNLFINKNCQKIKNCELLKQCLVIDRYVEIKILKVFKKIIKKHHFYKNHFLMDHNHNYGRDDYLNDGMYGYKHKFFIYKKYHFFSKNKLSIIYELQKKLYLINNFLYKF
SIO_010081: GJU04_RS00905
subclass of: SO_0000673
so part of: GJU04_RS00905
location: complement(182857..184164)
location: region:182857-184164:-1
so has part: feature:182857-184164:-1:exon

WP_168893031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182857-184164:-1:exon

GJU04_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00910
old locus tag: GJU04_00910
so part of: sequence
location: complement(184233..185213)
location: region:184233-185213:-1
so has part: feature:184233-185213:-1:exon
subclass of: SO_0000010

position:184233:-1
position: 184233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185213:-1
position: 185213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184233-185213:-1:exon

GJU04_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00910
old locus tag: GJU04_00910
inference: COORDINATES: protein motif:HMM:TIGR03317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIKEKKYNLLKIFYLNNLQIINIKGTDSKTFLQNQLTIDINKLDNNSNFLNAIHCNSNGKILTNMHIFKKSNNHYKYIIQKNILKKYLESIKKYILFYDIKIYLDPQEKIFLLSNINLQEKFIKIFKKNNVFYQKKTLFFFKKDIFLKFCYSNNYYFLVLSKKNIKLLIQDFSIKNVIFIKNNNFWNKFYMEIGYPIIDNKQNCNLFFPQESNMEKFDAIDFNKGCYLGQEIISILKFKKKKNKQLFLLEGKTKVFPLFDDLLEIKKNKTQKWQIIRGSIILKSLIIKSNLIWIQVILQNNIFKNSLIRLKKDKKSIFSIIKIFK
SIO_010081: GJU04_RS00910
subclass of: SO_0000673
so part of: GJU04_RS00910
location: complement(184233..185213)
location: region:184233-185213:-1
so has part: feature:184233-185213:-1:exon

WP_168893032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184233-185213:-1:exon

GJU04_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: carB
locus tag: GJU04_RS00915
old locus tag: GJU04_00915
so part of: sequence
location: complement(185258..188497)
location: region:185258-188497:-1
so has part: feature:185258-188497:-1:exon
subclass of: SO_0000010

position:185258:-1
position: 185258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188497:-1
position: 188497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185258-188497:-1:exon

GJU04_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: carB
locus tag: GJU04_RS00915
old locus tag: GJU04_00915
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015700980.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyl-phosphate synthase large subunit
translation: MPKRTDIKKIMILGSGPIVIGQACEFDYSGTQACKALKEEGYNLILVNSNPATIMTDPDIADITYIEPMNWEIIAKIIEKERPDVILPTMGGQTALNCILDLHKNNILNKFNVETIGVTIETINKAENRYYFAKIIKKLGFDVPHCLVVHNIDEAINNIKKIGFPCIIRPSFTMGGSGGGIANNIEEFKKICKNGFNLSSNHELIIDESLIGWKEYEMEIIRDKNDNSIIICSIENIDPMGIHTGDSITVAPAQTLSDKEYQIMRNASISIMKEMGIKSGGANVQFAVNPITGKLIIIEMNPRVSRSSALASKATGFPIAKISAKLSIGYTLDELTNDITSNNITAAFEPSIDYIVTKIPRFNFEKFHNVNDRLTTQMKSVGEVMAIGRSFQESIQKALCSLEIGINGFNSKIDLIKNEENYNLIIKELKNPGPDRIRFIADAIRIGISIEDIYDYSKIDKWFLLQIENLIIIENKVKKIGIKYLYDKQSFFNLKKKGFSDARLANLLNISEEKIRKLRYKLDIHPVYKRVDTCSAEFKTNTAYIYSTYETECEAYPNNNNKKIIILGSGPNRIGQGIEFDYCCVHASMILRKNNFETIMINCNPETVSTDYDISDRLYFEPITLESILEIIRIEKPQGVIIQYGGQTPLNLAKELEKENISILGTSPASIDLAENRKKFQQIINSLKLKQSLNYIVKNLNEALDKANEIGFPLIVRPSYVLGGRSMEIVYNKNDLKNYYLLNIKSNIPVLLEKFLKNAIEVDVDAICDQKNIFIGGIMEHIEYVGIHSGDSACSFPTRTLSKSILKKIKIQTKQLAIKINVCGLINIQFAIKNNEIYIIEVNPRASRTIPFISKAINIPLAKMGTLVMIGQTLTNLKLDKEIIPPYFTVKEVILPFDKFDNIDPILGPEMKSTGEVMGIGFSFAEAFYKAILGTKFDIKKNSTILVSVQNKDKKLIFPIVQKLINYGFKIEATYGTSKFLKKLNLLVKTVRKPIEKKPNIINFIQNKRYSYIINIVEKKESINNSKLIRILALKNNIYYNTTINGAKASLISIGSNFKKRVFSLQELHKILLKKNLNL
SIO_010081: GJU04_RS00915
subclass of: SO_0000673
so part of: GJU04_RS00915
location: complement(185258..188497)
location: region:185258-188497:-1
so has part: feature:185258-188497:-1:exon

WP_168893033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185258-188497:-1:exon

GJU04_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: carA
locus tag: GJU04_RS00920
old locus tag: GJU04_00920
so part of: sequence
location: complement(188499..189644)
location: region:188499-189644:-1
so has part: feature:188499-189644:-1:exon
subclass of: SO_0000010

position:188499:-1
position: 188499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189644:-1
position: 189644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188499-189644:-1:exon

GJU04_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: carA
locus tag: GJU04_RS00920
old locus tag: GJU04_00920
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005225052.1
GO component: GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO function: GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
translation: MNNKAIVLMEDGTKLFGKSIGVEGIVIGEIVFNTAITGYQEIITDPSYYKQIVTLTYPHIGNVGTNLEDNESSKIYLKGLIINNLSKISSNYRSTENLDVFLKKNNIVAIEGIDTRYLTRLIRNKKLNKISLIVTKEYLNYKNIIEKINKYNGLKGINLIKNITTKKKYSWTEGNKNTKVIKNYIFLIHIVVIDFGVKKSILKMFIDKKCKITVVPAFTSYENLILLNPDGIFLSNGPGDPTPCFSIINTIKKILTTNIPIFGVCFGHQILAIASGAKIKKMDIGHHGSNHPVKDLKNNKVLITTQNHCFTIDPNNFPKNLEITHKSLFDNTIQGIHYINKPVFGFQGHPESSPGPHDASILFDYFIELIQIYCKKKYKRL
SIO_010081: GJU04_RS00920
subclass of: SO_0000673
so part of: GJU04_RS00920
location: complement(188499..189644)
location: region:188499-189644:-1
so has part: feature:188499-189644:-1:exon

WP_246208783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188499-189644:-1:exon

GJU04_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ilvC
locus tag: GJU04_RS00925
old locus tag: GJU04_00925
so part of: sequence
location: complement(189872..191353)
location: region:189872-191353:-1
so has part: feature:189872-191353:-1:exon
subclass of: SO_0000010

position:189872:-1
position: 189872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191353:-1
position: 191353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189872-191353:-1:exon

GJU04_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ilvC
locus tag: GJU04_RS00925
old locus tag: GJU04_00925
EC number: 1.1.1.86
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006658216.1
GO function: GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ketol-acid reductoisomerase
translation: MNNYFNNLNFRKKLKNLQKCRLMQFEEFTNSINYLKNKNIVIIGCGSQGLNQGLNMRDSGLNISYALKTESIKEKNLSWQRAYKNNFNIGSYRELIPNADLIINLTPDNNHHNILKKIKPLIKKGATLGYSHGFNIIEEGEKIPKNITVIMVAPKCPGTEVREEFKRGFGVPALIAVHQNGIHNDGFNIAKSWAYSIGSHKAGVLESSFSAEVKSDLMGEQTVLCGILQTTSILLFDKLLTLNVNPSYASQLIQLGWESITESLKQGGISLMMDRLNNFSKIRAYELSLILKKKLKPLFKIHIDNIISGKFSKELIEDWNNNNNNLIKWREIYKNNNFEKTKNNEDNDIKEQDYFDKGIFMIAIIKSSIELSFELMIESGIATASAYYESLHELPLIANTIARKKLYEMNKVISDTAEYGNYLFSNNAIPLLKNFINNLTSEDLGIIEIKNKLINNKYLRDLNYDIRNHPIEKVGYILRNYMIHMKSLTNIRR
SIO_010081: GJU04_RS00925
subclass of: SO_0000673
so part of: GJU04_RS00925
location: complement(189872..191353)
location: region:189872-191353:-1
so has part: feature:189872-191353:-1:exon

WP_168893035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189872-191353:-1:exon

GJU04_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ilvD
locus tag: GJU04_RS00930
old locus tag: GJU04_00930
so part of: sequence
location: complement(191580..193439)
location: region:191580-193439:-1
so has part: feature:191580-193439:-1:exon
subclass of: SO_0000010

position:191580:-1
position: 191580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193439:-1
position: 193439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191580-193439:-1:exon

GJU04_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ilvD
locus tag: GJU04_RS00930
old locus tag: GJU04_00930
EC number: 4.2.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011054076.1
GO function: GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroxy-acid dehydratase
translation: MPNFRSFITTKGRNMAGARALWRATGMNDEDFNKPIIAIVNSFSQFVPGHIHLQTLSKIIANEIKNNGGVPKEFNTIAIDDGIAMGHNGMLYSLPSRELIADSIEYVINAHCADSMICISNCDKITPGMLMASLRLNIPTVFISGGPMEAGRINIKGTTKIKKIDLVDAMVESGKLEQSDKYIKEIELNACPTCGSCSGMFTANSMNCLVEALGLALPGNGSLLSTHINRKKLCIKSAHKIVEITKKYYLNNEINILPKNIINQQAFENATMLDIAMGGSTNTILHMLALSQETKVEFNLKKIDQLSKNTPWLCMVSPSTNKFYMEDFHRSGGVIGVLSELNKIGLINKDVKNILGLTLEETIHKYDITITNSNKIKKFYQSAPGNIKTIYPFIQNKIWDLDINRQKGCIRSYKYAYSKDGGLAVLYGNLAKDGCVVKTASVNKKLLFFVGKVKVFDSQESAVYAIINKNISAGDIIVIRYEGPKGGPGMQEMLYPTSYLKSMKLDKNCALITDGRFSGGTSGLSIGHISPEAASKGIIALVKDGDIIKIDIPNRSIELEVPSFILNERKKEEEKRGKLAYTPLLKRKRKISLALKAYAFLATSADKGAVRDKNKLNYK
SIO_010081: GJU04_RS00930
subclass of: SO_0000673
so part of: GJU04_RS00930
location: complement(191580..193439)
location: region:191580-193439:-1
so has part: feature:191580-193439:-1:exon

WP_168893036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191580-193439:-1:exon

GJU04_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00935
old locus tag: GJU04_00935
so part of: sequence
location: complement(193469..194398)
location: region:193469-194398:-1
so has part: feature:193469-194398:-1:exon
subclass of: SO_0000010

position:193469:-1
position: 193469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194398:-1
position: 194398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193469-194398:-1:exon

GJU04_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00935
old locus tag: GJU04_00935
EC number: 2.6.1.42
inference: COORDINATES: similar to AA sequence:RefSeq:NP_709575.1
GO function: GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO process: GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transaminase
translation: MSIKKADFIWLNGNIVKWEDAKISVMTHALHYGTSVFEGIRCYKSYKGPAIFRHKDHINRLYNSAKIYRFPLKFNIQEIMNAVHNIININKLNEAYIRILVFIGDVGLGINPPEKYYTDMMISAFPWTDYLGNNAKKNGINTMISSWNKIKPNTIPSLAKAGGNYLSSLLIRSEARRNGYDEGIALDSLGFVSEGSGENIFKIKNNILFTPPLTSSILPGITRDSVLKIAKNLNLKIKECLILRESLYLADEIFLTGTAAEITPVCSVDNILINNGKRGQITKNIQKEFLYLLTGKIKDKWNWLDYIKK
SIO_010081: GJU04_RS00935
subclass of: SO_0000673
so part of: GJU04_RS00935
location: complement(193469..194398)
location: region:193469-194398:-1
so has part: feature:193469-194398:-1:exon

WP_168893037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193469-194398:-1:exon

GJU04_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ilvM
locus tag: GJU04_RS00940
old locus tag: GJU04_00940
so part of: sequence
location: complement(194444..194677)
location: region:194444-194677:-1
so has part: feature:194444-194677:-1:exon
subclass of: SO_0000010

position:194444:-1
position: 194444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194677:-1
position: 194677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194444-194677:-1:exon

GJU04_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ilvM
locus tag: GJU04_RS00940
old locus tag: GJU04_00940
EC number: 2.2.1.6
inference: COORDINATES: protein motif:HMM:NF008362.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase 2 small subunit
translation: MNKYQLFIKTNISPEIIERIIRIIRHRRFLIKTININVKKKIEKINFKLIVKSYKSIDFLVKQIKKLIDVLDIVIIT
SIO_010081: GJU04_RS00940
subclass of: SO_0000673
so part of: GJU04_RS00940
location: complement(194444..194677)
location: region:194444-194677:-1
so has part: feature:194444-194677:-1:exon

WP_168893038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194444-194677:-1:exon

GJU04_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ilvG
locus tag: GJU04_RS00945
old locus tag: GJU04_00945
so part of: sequence
location: complement(194678..196339)
location: region:194678-196339:-1
so has part: feature:194678-196339:-1:exon
subclass of: SO_0000010

position:194678:-1
position: 194678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196339:-1
position: 196339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194678-196339:-1:exon

GJU04_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ilvG
locus tag: GJU04_RS00945
old locus tag: GJU04_00945
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1
GO function: GO:0003984 - acetolactate synthase activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase 2 catalytic subunit
translation: MNGAQCIIQELKKQNVKTVFGYPGGAIMPLYDALYNGDIEHILCRHEQGAAIAAIGYARATGKVGVCIATSGPGATNLITGLADAMVDSVPLIAITGQVPLSLIGTDAFQEIDIIGMSLSCTKHSFLITSSLELSKIIKKSFFIALSDRPGPVLIDIPKDIQLSKLPKIIKLKNKKRFFGNKKKYSKKKIREANFLLKKSTMPILYIGGGVNIGNAVYTLRKFVKISKIPTVVTLKALGTIESTNPYYLGMLGMHGNKAANYTVQKCDLLIAIGARFDDRVTGNIKKFAPYAKIIHMDIDPAEINKICKVNVELLGDLNLLIPLLKKPQNILKWQNYIQKIKKKYSYKYNFFVKNNKIYAPFLLKQLSDIKNKKTIITTDVGQHQMWTAQHITFSNPRNFITSSGLGTMGFGLPAAIGAQIAKPNNSVICISGDGSFIMNIQELSTIKRKNLPIKIILLDNKRLGMVRQWQELFFKKRYSETTLYDNPDFIKLAQSFGISGHSISYENEINKSLKKIFSINKPYILHVLINECDNVWPLVPPGYSNDHMMEPN
SIO_010081: GJU04_RS00945
subclass of: SO_0000673
so part of: GJU04_RS00945
location: complement(194678..196339)
location: region:194678-196339:-1
so has part: feature:194678-196339:-1:exon

WP_168893039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194678-196339:-1:exon

GJU04_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00950
old locus tag: GJU04_00950
so part of: sequence
location: complement(196583..196655)
location: region:196583-196655:-1
so has part: feature:196583-196655:-1:exon
subclass of: SO_0000663

position:196583:-1
position: 196583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196655:-1
position: 196655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196583-196655:-1:exon

GJU04_RS00950
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00950
old locus tag: GJU04_00950
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(196620..196622),aa:Trp,seq:cca)
SIO_010081: GJU04_RS00950
subclass of: SO_0000673
so part of: GJU04_RS00950
location: complement(196583..196655)
location: region:196583-196655:-1
so has part: feature:196583-196655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196583-196655:-1:exon

GJU04_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00955
old locus tag: GJU04_00955
so part of: sequence
location: 196860..197609
location: region:196860-197609:1
so has part: feature:196860-197609:1:exon
subclass of: SO_0000010

position:196860:1
position: 196860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197609:1
position: 197609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196860-197609:1:exon

GJU04_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00955
old locus tag: GJU04_00955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070079.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MTEWSIGKIKKIKYWTKNLFSIILNAKINNFYAGQFTKLALEINNKKIKRAYSYINSPKNKNYEFYISNISKGKLSPYLFNLKINDKIFISKNSSGIFILNNIKSCENLWMLSTGTGIGPYLSILQDNMCFKKFSKIILVHSIRYIEDFSYLHLLKLIQKKHMNQLIIQIILTRNININNNILYGYIPNLIQNGKLEEKVGLKINNNSHVMLCGNPEMIKQTQSFLEKTRNLSKNLKNQNGNITTERYW
SIO_010081: GJU04_RS00955
subclass of: SO_0000673
so part of: GJU04_RS00955
location: 196860..197609
location: region:196860-197609:1
so has part: feature:196860-197609:1:exon

WP_168893040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196860-197609:1:exon

GJU04_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tpiA
locus tag: GJU04_RS00960
old locus tag: GJU04_00960
so part of: sequence
location: 197632..198417
location: region:197632-198417:1
so has part: feature:197632-198417:1:exon
subclass of: SO_0000010

position:197632:1
position: 197632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198417:1
position: 198417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197632-198417:1:exon

GJU04_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tpiA
locus tag: GJU04_RS00960
old locus tag: GJU04_00960
EC number: 5.3.1.1
inference: COORDINATES: protein motif:HMM:NF012349.2
GO function: GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MKKFLIIANWKLNGNYKFINKNINLIKKKIDNLLNYCNLSIAPPFVYLSYINNFLKNTSISLTAQNVDIHIKGSFTGEISIKMLKDIGVKYVIIGHSERRLYHNENNNSISKKFILIKNNGLIPILCIGETEKQKKQNETEKICIQQIDNILENSNINILNKTIIAYEPIWAIGSGKSANMNEIQKVILYIKKYIASLNPQIAENIYFVYGGSVNYSNLDIFLKKKIINGFLVGKASLTTENFISLVKKAEKIISLLNNRS
SIO_010081: GJU04_RS00960
subclass of: SO_0000673
so part of: GJU04_RS00960
location: 197632..198417
location: region:197632-198417:1
so has part: feature:197632-198417:1:exon

WP_168893041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197632-198417:1:exon

GJU04_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lysS
locus tag: GJU04_RS00965
old locus tag: GJU04_00965
so part of: sequence
location: complement(198400..199923)
location: region:198400-199923:-1
so has part: feature:198400-199923:-1:exon
subclass of: SO_0000010

position:198400:-1
position: 198400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199923:-1
position: 199923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198400-199923:-1:exon

GJU04_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lysS
locus tag: GJU04_RS00965
old locus tag: GJU04_00965
EC number: 6.1.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499575.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MSKNKKKFNKNINNITNNEITFRHKKLTELRKNENIVFPNNFKINISLCDIYKKYNDKNIFLEKKLFNIAGRIVNLRIMGKASFINIQDYTGQIQIYISQNGVSQKIYKIFLKKYDLGDIIGIIGYIFKTKTNILSIFCQKIYLLTKAIRPLPDKYHGLQDKEIKYRKRYLDLIVNKKTRYIFKKRSQIILNIRNFMNKQDFIEVETPMMHNIPGGALARPFITHHNTYNKNIYLRIAPELYLKRLIIGGFNKIFEINRNFRNEGISTQHNPEFTMMELYITYSNYKDLMIFFEKLLKKIFKITFKNNLLKYNNYIFDLNKKFNKLTMKESIIYFYPNFSLENLKNNKELIKTANLLNVKINKHWSQGKIIFEIFEKKIIDKIIEPTFITEYPIEISPLSRNNDLNPLFTDRFEFFICGMEIANGFSELNDPEEQEKRFKEQQNFKNIDNNKNIYENFYDKDYIEALEHGLPPTAGLGIGIDRLVMLFTDTKSIKDVILFPMLRSII
SIO_010081: GJU04_RS00965
subclass of: SO_0000673
so part of: GJU04_RS00965
location: complement(198400..199923)
location: region:198400-199923:-1
so has part: feature:198400-199923:-1:exon

WP_168893042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198400-199923:-1:exon

GJU04_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: prfB
locus tag: GJU04_RS00970
old locus tag: GJU04_00970
so part of: sequence
location: complement(199952..201050)
location: region:199952-201050:-1
so has part: feature:199952-201050:-1:exon
subclass of: SO_0000010

position:199952:-1
position: 199952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201050:-1
position: 201050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199952-201050:-1:exon

GJU04_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: prfB
locus tag: GJU04_RS00970
old locus tag: GJU04_00970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_158343766.1
ribosomal slippage: true
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 2
translation: MLEIYLIKNKLKKIKKKNIFIRGFLNYSKYKKKLLIIKNQLKNPDIWDNFNYLFSLNKKKTHIENLLSSLDYINQEIIDINELINLAINTNDKKILEESIKILFNIQKKLNNLEFKKIFIQKNDKKNCFIDIQSGSGGIESQDWAKIIMKMYLKWAEKKKFQVKIINESPGEIIGIKSSTLHIIGDYAFGWLRTENGIHRLVRKSPFSSSGRRHTSFASTFIYPEIKDDINILINLEDLRIDVYRSSGAGGQHVNRTESAVRITHIPTGIVTQCQNNRSQHKNKIQAMKQIKFKLYELQNNIKKKIKKKIEKKKFNISWGYQIRSYILDNSKIKDIRTGIETNDVQYVLDGNLDKFIQASLKLGL
SIO_010081: GJU04_RS00970
subclass of: SO_0000673
so part of: GJU04_RS00970
location: complement(join(199952..200974,200976..201050))
location: region:199952-201050:-1
so has part: feature:200976-201050:-1:exon
so has part: feature:199952-200974:-1:exon

WP_168893043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200976-201050:-1:exon

position:200976:-1
position: 200976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199952-200974:-1:exon

position:200974:-1
position: 200974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJU04_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00975
old locus tag: GJU04_00975
so part of: sequence
location: complement(201189..201261)
location: region:201189-201261:-1
so has part: feature:201189-201261:-1:exon
subclass of: SO_0000663

position:201189:-1
position: 201189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201261:-1
position: 201261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201189-201261:-1:exon

GJU04_RS00975
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS00975
old locus tag: GJU04_00975
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(201226..201228),aa:Ile,seq:cat)
SIO_010081: GJU04_RS00975
subclass of: SO_0000673
so part of: GJU04_RS00975
location: complement(201189..201261)
location: region:201189-201261:-1
so has part: feature:201189-201261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201189-201261:-1:exon

GJU04_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00980
so part of: sequence
location: complement(201322..>202191)
location: region:201322-202191:-1
so has part: feature:201322-202191:-1:exon
subclass of: SO_0000010

position:201322:-1
position: 201322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202191:-1
position: 202191
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201322-202191:-1:exon

GJU04_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00980
inference: COORDINATES: protein motif:HMM:NF024578.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PDZ domain-containing protein
translation: NPYGLGETVTSGIISGLGRTGLNIENFENFIQTDAAINRGSSGGALVNLNGDLIGINTAILTPNEGNIGIGFAIPSNTVVSLVNQFIKFGKIIRGSLGIYGVELDPQLAKVMNISNLCKGTFIRDIVPFKNNPLKPGDIIVSLNGKQVNSYSLLKAKISTFMRGTIVKLGIIRKGIFKNIKIKLDDYCNNDSFAKNMMYYGIEGSDLINTDLKNRNIFFKIGKNTAVKVIKVLPNSPAAIIGLKKDDIILSINRKRTADIKKVKEILDKHPSLILLYILRGKDKFYLLN
SIO_010081: GJU04_RS00980
subclass of: SO_0000673
so part of: GJU04_RS00980
location: complement(201322..>202191)
location: region:201322-202191:-1
so has part: feature:201322-202191:-1:exon

WP_168893044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201322-202191:-1:exon

GJU04_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS00985
so part of: sequence
location: complement(<202287..202950)
location: region:202287-202950:-1
so has part: feature:202287-202950:-1:exon
subclass of: SO_0000010

position:202287:-1
position: 202287
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:202950:-1
position: 202950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202287-202950:-1:exon

GJU04_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS00985
inference: COORDINATES: protein motif:HMM:NF024758.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like peptidase domain-containing protein
translation: MKKFKIFFYIFFFIIGITIQQHVNAKLLPFNLIKKCNNNTLPSLSRVLSKVTPSVVSIDVQGSTFVSQFRLPPKIQEYLNEHFSLCKEGSPYENTPICGNNNNVLEQKFHAIGSGVIINSKEGIIVTNNHVINHASYITVELNNGKTYEAKIIGQDSQMDIALIKIQDKTKNLKSLKIANSDNLKVGDYAIAIGNPYGLGETVTSGIISGLGRTGLNIENF
SIO_010081: GJU04_RS00985
subclass of: SO_0000673
so part of: GJU04_RS00985
location: complement(<202287..202950)
location: region:202287-202950:-1
so has part: feature:202287-202950:-1:exon

WP_168893045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202287-202950:-1:exon

GJU04_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpiA
locus tag: GJU04_RS00990
old locus tag: GJU04_00985
so part of: sequence
location: 203139..203807
location: region:203139-203807:1
so has part: feature:203139-203807:1:exon
subclass of: SO_0000010

position:203139:1
position: 203139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203807:1
position: 203807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203139-203807:1:exon

GJU04_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpiA
locus tag: GJU04_RS00990
old locus tag: GJU04_00985
EC number: 5.3.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672643.1
GO function: GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-5-phosphate isomerase RpiA
translation: MFNKLKIIAAKSAIKYIKNNNIIGIGSGTTISHFIDILFTEKKNIKGIVSASKTSTKKLKKYNFNIYQINKIKKIGIYFDSADEINNKMQMIKGGGAALTNEKIISSFSDIFICIIDESKYVKKLGILHPVPIEIIPLAEKFIIRKLLHIGAIAKKRINTITEHGNIILDVYKLNLHKPMKIEQYINNIPGVVTVGLFARRCADIVIISKNNNTISIINKKK
SIO_010081: GJU04_RS00990
subclass of: SO_0000673
so part of: GJU04_RS00990
location: 203139..203807
location: region:203139-203807:1
so has part: feature:203139-203807:1:exon

WP_168893046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203139-203807:1:exon

GJU04_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dapF
locus tag: GJU04_RS00995
old locus tag: GJU04_00990
so part of: sequence
location: 203869..204693
location: region:203869-204693:1
so has part: feature:203869-204693:1:exon
subclass of: SO_0000010

position:203869:1
position: 203869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204693:1
position: 204693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203869-204693:1:exon

GJU04_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dapF
locus tag: GJU04_RS00995
old locus tag: GJU04_00990
EC number: 5.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011283116.1
GO function: GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate epimerase
translation: MKFTKMHALGNDFIIINNIKNIFFLTKEIIQKLSNRYLGIGFDQLLLLELSLNKNIDFHYRIFNSDGNEVEQCGNGARCIALYLKIKKLTLKKKICLSTKNRLIYLKNLNNNLISVNMGVPLFNPKEIPFITNNIKNTYKFYFQNKYIYFNVVSLGNPHCVIQVKDVLDTPVSLIGPFFENHKSFPKKINVGFMEYLNINNIKIRVFERGVGETMSCGSGACAAVAIGIKKNILSKKVYVHLTGGIIMISWQGGNHDLYMQGSANYVYDGKISL
SIO_010081: GJU04_RS00995
subclass of: SO_0000673
so part of: GJU04_RS00995
location: 203869..204693
location: region:203869-204693:1
so has part: feature:203869-204693:1:exon

WP_168893276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203869-204693:1:exon

GJU04_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01000
old locus tag: GJU04_00995
so part of: sequence
location: 204726..206933
location: region:204726-206933:1
so has part: feature:204726-206933:1:exon
subclass of: SO_0000010

position:204726:1
position: 204726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206933:1
position: 206933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204726-206933:1:exon

GJU04_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01000
old locus tag: GJU04_00995
inference: COORDINATES: protein motif:HMM:NF024754.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MKNFNLLNNLNNKQKEVVSEIRKNLLILAGAGSGKTLVLIRRIAWLIYKENCSPKSILAMTFTNKAALELKNRIKSLIKNYQKNNNIWIGTFHSFAYYILRIYYLEAGLTKNFQIIDTFDQKNFIKKILKKLSLQNKNFSIENILKYINNFKNNFFNKNYNFFNENNSSYNPIFSKIYVEYENYCKLTEVIDFNDLILYLYKLFLYNPNILKIYQQRFQNILIDEFQDTNDIQYKFISLLYSKYYNTKIFLVGDDDQSIYGWRGAQVENMHRFLKDFDKVKIILLEQNYRSTSNILEAANKLISYNNTRLKKKLWTHENNGRLIYIYSAFNEFDEAKYIAKYICKNFIKKNIELNNCAILYRNNFQSRILEEIMLKFAIPYKIYGGIRFFERQEIKYILSYLRLISNYNDDNSFERIINIPKRSIGEKTLNIIKYISKKYLLTLWESSIYLLENKKYLNTMSFNALKKFIILIKSLKSNIKNKPLSIIIKETIKDSGLWEMYSKSCFNEKNFNKINNLKELINAADDFTKNSLINKNELFYKNIKENLLINFLSQALLLTEDVNLNQTNQKINNYIQMMTIHASKGLEFSEVFIIGMEEGIFPNKISFINQNIHEERRLAYVGITRAKKKLTLTYTKKRYLYGKEINSIPSRFINELPKNCIKKISYLKKDNILFTSDHILNEKKYHIGQIVYHKIFGKGIILKIEIIKNNIKLQINFNNKVIKWIISDYIQTYI
SIO_010081: GJU04_RS01000
subclass of: SO_0000673
so part of: GJU04_RS01000
location: 204726..206933
location: region:204726-206933:1
so has part: feature:204726-206933:1:exon

WP_168893047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204726-206933:1:exon

GJU04_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: corA
locus tag: GJU04_RS01005
old locus tag: GJU04_01000
so part of: sequence
location: 207012..207968
location: region:207012-207968:1
so has part: feature:207012-207968:1:exon
subclass of: SO_0000010

position:207012:1
position: 207012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207968:1
position: 207968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207012-207968:1:exon

GJU04_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: corA
locus tag: GJU04_RS01005
old locus tag: GJU04_01000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1
GO function: GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium/cobalt transporter CorA
translation: MLNAYKIYNKHLIYIKLNNNYNNLLDAIWIDLIKPEDNERKKIFSLLGQNLATRPELEDIEASARFFENNEGLHIHSFFFYKNKDEYAGITTVAFTIKNDRLYTLREKELSTFRLYRKRMYNHNTMIYGNPYELLLDIFDTKIEQLADKIENIYSDLESLSCIIMKRHKSDQVDNALSTLAELEDIGWKVRLCLMDTQRAVNFLMRKTRLPKIQIEQAREISRDIESLLPHNESLFQKVNFLVQAAMGFINIEQNRIIKIFSLVSVIFLPPTLVASNYGMNFSFLPELKWKYGYFYAIIIMIISALAPYFYFKRKKWL
SIO_010081: GJU04_RS01005
subclass of: SO_0000673
so part of: GJU04_RS01005
location: 207012..207968
location: region:207012-207968:1
so has part: feature:207012-207968:1:exon

WP_168893048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207012-207968:1:exon

GJU04_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01010
old locus tag: GJU04_01005
so part of: sequence
location: 208895..211621
location: region:208895-211621:1
so has part: feature:208895-211621:1:exon
subclass of: SO_0000010

position:208895:1
position: 208895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211621:1
position: 211621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208895-211621:1:exon

GJU04_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01010
old locus tag: GJU04_01005
EC number: 1.2.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010896057.1
GO function: GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-oxoglutarate dehydrogenase E1 component
translation: MNNNYFKKNILYENILYIEKLYKNFLINPNSIDKKWVNIFINIREKNKYLNKNNKFENEYFYKKIFLKEKINQLINNFRIFGHYYSNINPLILNKKKISNLLELKNYQINEKDFQEKITLNSSFKNEKIINIYNFFKKKYCNSIGIEYFHLLENEKQWIKKNIEIKDYNLTQIEKKIFLEELIATEIFETNIGKKFPGAKRFSLEGCDVLIPLIKEIIRYSGKLENKTKKIIFSMAHRGRLNFLVNIMGKKIKNIIDEFLNILPEKDNIDDVKYHLGYSSIIEINKRKIELELAFNPSHLEVINSITMGVTRFNNDLLKKKNIKNINILPINIHGDASFSGQGIIQEILNLSQTRGYRVNGTIHIIINNQIGFTISKNIDMRSSYYCTDIAKMIQCPIFHVNADDLESVIFIIRIAIKYRNKFHKDIFIDLVSYRRHGHNEMDDPYITQPLMYNYIKNHKKIQDLYFNQLFLKNIIDNVEKKKIYQKYQTLFDKGDVFIKTLFPLKKKYKNIIFKNIKINELKKLLLKISSLPKNFNIHPIVKKIYLNRINMSKEIKKIDWGAAENLAFANILNQGISCRFSGEDVKRGTFSHRHSVIYDQKNGVSYTPLNNINLQQGIFDIYNSILSEEAVLGFEYGYSLNNINGITIWEAQFGDFINGAQIIIDQFISSGEIKWNYKSGLIIILPHGYEGQGPEHSSARIERFLQLCAKKNMKICVPSNASQMYHLLCEQAFNPIKKPLIIFSPKSLLRNPLACSSLKNFINNSFKLVIDELNAKINIKNIQRLIFCTGKIYYDLLEYRNLIKNNNIIIIRIEQLYPFPKKDLKKIIKKYKKIKYFCWCQEEPKNQGSWIYIQNCFKTKLNLNINYFGRNKSPSPSTGYFIIHKKQQQKIIHSVFNIDIKNKKINL
SIO_010081: GJU04_RS01010
subclass of: SO_0000673
so part of: GJU04_RS01010
location: 208895..211621
location: region:208895-211621:1
so has part: feature:208895-211621:1:exon

WP_168893049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208895-211621:1:exon

GJU04_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: sucB
locus tag: GJU04_RS01015
old locus tag: GJU04_01010
so part of: sequence
location: 211631..212800
location: region:211631-212800:1
so has part: feature:211631-212800:1:exon
subclass of: SO_0000010

position:211631:1
position: 211631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212800:1
position: 212800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211631-212800:1:exon

GJU04_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: sucB
locus tag: GJU04_RS01015
old locus tag: GJU04_01010
EC number: 2.3.1.61
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053815.1
GO component: GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO function: GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
GO process: GO:0006554 - lysine catabolic process [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrolipoyllysine-residue succinyltransferase
translation: MDNINIIVPELPESINNAIIIQWYKKPGEEVKIDDILLELETDKVVLEIPSTINGLLEKILVKEGEKVKSQQIIGILKKEKDLKDKKIINNIKESKFTNNINNKKKNLKNLNNFSPSVRRNIKKNNFSLNEINNFNNKINLNLKNFDNLKEKKEKILNNHNFEKKKMSPIRKYISKKLMDSKNNTVMLTTFNEVNMKEIINIKNNYKNFIFENYNIKLGFTSFHIKAVTKALQSFKKINAFIDGEDIIYNNLYNINIAIATKRGLIAPIIYNTNTLSLIDIEKKIKKLIIKSNNNQLSIKDLVSGTFTITNGGVFGSLMSTPIINPPQSAILGMHVIKERPIVIDHKICIMPMMYLALSYDHRLIDGKEAIGFLMLIKTLLEDPIKLFL
SIO_010081: GJU04_RS01015
subclass of: SO_0000673
so part of: GJU04_RS01015
location: 211631..212800
location: region:211631-212800:1
so has part: feature:211631-212800:1:exon

WP_168893050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211631-212800:1:exon

GJU04_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01020
old locus tag: GJU04_01015
so part of: sequence
location: 212937..214517
location: region:212937-214517:1
so has part: feature:212937-214517:1:exon
subclass of: SO_0000010

position:212937:1
position: 212937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214517:1
position: 214517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212937-214517:1:exon

GJU04_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01020
old locus tag: GJU04_01015
EC number: 1.10.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017345459.1
GO component: GO:0070069 - cytochrome complex [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]
GO process: GO:0019646 - aerobic electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome ubiquinol oxidase subunit I
translation: MLNVIDLSRLQFALTAMYHFIFVPLTLGLSFLLAIMETLYILSKKKIYRDMTKFWGKLFGVNFALGIVTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLVAFFLESTFVGLFFLGWDRLNKIQHLFVTWFVAIGSNLSALWILIANGWMQNPIASSFNYQNMRMEMNNFWKLIFNPIAQIKFFHTVTAGYTTGSIFIIGISSYYILKKRDIEFSKKSIMIASCFGLFSIISVIILGDESGYQLRKTQKTKLAAIEAEWETQKPPASFNIICLPNQKKKLNKFSIKIPYILGIIATRSTNLPILGIKDLIKNNELKIKNGLKALIALEKIKNGNSYLNNIKIFEQNKKYLGYGFLFKQYYQDIYHINNEQIKKVAKISIPIISPLFFSFRIMVLSSLILLIILIIVFFFTLVRDSIEKKKYLLKTCLYIIPLPWIASESGWFVAEYGRQPWAIKDILPTYMAGSSLELTEVLFSIITIFVFYTILLIIELYLIYKISSVGPSILKTGKYFFEKNTLQKNILKKNN
SIO_010081: GJU04_RS01020
subclass of: SO_0000673
so part of: GJU04_RS01020
location: 212937..214517
location: region:212937-214517:1
so has part: feature:212937-214517:1:exon

WP_168893051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212937-214517:1:exon

GJU04_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: cydB
locus tag: GJU04_RS01025
old locus tag: GJU04_01020
so part of: sequence
location: 214527..215672
location: region:214527-215672:1
so has part: feature:214527-215672:1:exon
subclass of: SO_0000010

position:214527:1
position: 214527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215672:1
position: 215672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214527-215672:1:exon

GJU04_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: cydB
locus tag: GJU04_RS01025
old locus tag: GJU04_01020
inference: COORDINATES: protein motif:HMM:TIGR00203.1
GO function: GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome d ubiquinol oxidase subunit II
translation: MLNYEFLCLIWSIIIGVLITGFLITDGLDMGVGILLFIIGKNNIERRIMINTIAPHWDGNQVWLITTGGALFAAWPIVYATIFSHFYIMMILLLLSLFLRPVGFEYRSKIKNKIWQKICDLCISIGSIIPPAILGLILSNILEGIPFYIDKYHHIYSQKHFLKSFNLSSFIISFTTIILIINHAASYLQIRIKDSNLNNRLQKVLKLSSILLVIFVLLSFINILFFMKGYKINYFINKKTNISYVKDYNIFHQRKAWMSNFQNYKYLYLIPLLSIILPFLTLLSSIYKKLLLTLICSSFTIISIILNIGIIMFPFILPSNIKYYQSLTIWNATSSQLTLNIMLYIVIVFMPIVLFYTFWCYKKMFFYLNKKKIKKKSDFYY
SIO_010081: GJU04_RS01025
subclass of: SO_0000673
so part of: GJU04_RS01025
location: 214527..215672
location: region:214527-215672:1
so has part: feature:214527-215672:1:exon

WP_168893052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214527-215672:1:exon

GJU04_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: parE
locus tag: GJU04_RS01030
old locus tag: GJU04_01025
so part of: sequence
location: 216016..217935
location: region:216016-217935:1
so has part: feature:216016-217935:1:exon
subclass of: SO_0000010

position:216016:1
position: 216016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217935:1
position: 217935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216016-217935:1:exon

GJU04_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: parE
locus tag: GJU04_RS01030
old locus tag: GJU04_01025
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013814615.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit B
translation: MNHLNQYNADSIEVLEGLDPVRRRPGMYTDLTRPNHLAQEVIDNSVDEALAGYAKNIFVTLHKDQSLEVIDDGRGMPTDIHSREGIPAIELILCRLHAGGKFSNKNYHFSGGLHGVGISVVNALSKKMEVSIFRKNKVYKIVFENGYKTQNLSFYENMDNQKTGTKIRFWPNKKFFEHHTFLISNLINLLKAKAVLCSNLKVCFTNKNTKDYYCWIYKKGLSEYLINSVKNVITIPNLPFIGEYFNDTKHLNWALFWIPENNNNIITESYVNLIPTTYGGTHVNGLRLGLLDAIRHFCNFHNMLPRNIKLLGEDIWYQCSYVLSIKIQDPQFTGQTKERLSSRQCTIFVANIVRDSFILWLNQNFKISSILIDLFITNAQKRIRESKKFIKKKNYNTNSILPNKLSDCIINNKKETELFLVEGDSAGGSAKQARNKNFQAVMPLKGKILNTWEINSEEILSSQEIYDISLAIGIYPNNEDLKKLRYNKICILADADSDGLHIATLLCALFIKHFLPLVKNGHIYVAMPPLYRIDLGKKIFYALDENEKNKILKQNYLKKDQQKINVQRFKGLGEMNPTQLRETTFNPNSRRLIQLVLNNNEKEIQKTFSLMDMLLAKKRAEDRRKWLQKKGDITTIISI
SIO_010081: GJU04_RS01030
subclass of: SO_0000673
so part of: GJU04_RS01030
location: 216016..217935
location: region:216016-217935:1
so has part: feature:216016-217935:1:exon

WP_168893053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216016-217935:1:exon

GJU04_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: aceE
locus tag: GJU04_RS01035
old locus tag: GJU04_01030
so part of: sequence
location: 218070..220736
location: region:218070-220736:1
so has part: feature:218070-220736:1:exon
subclass of: SO_0000010

position:218070:1
position: 218070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220736:1
position: 220736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218070-220736:1:exon

GJU04_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: aceE
locus tag: GJU04_RS01035
old locus tag: GJU04_01030
EC number: 1.2.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013319442.1
GO component: GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO function: GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate dehydrogenase (acetyl-transferring), homodimeric type
translation: MSDNYIFYNDVDPIETNDWIQSIESVIKEEGIERAKFLLKKTIIHLNKYGINFNLHNNNYVNSISREQDNIYPGNLILEEKIRSIIRWNSIMIILRASKKNLDLGGHIASYQSASYIYEVCFNHFFKAYNNQNNGDIIYFQGHISPGIYARSFVEGRISVNHLNNFRQEVFGSGLSSYPHPKLMPNFWQFPTVSMGLGPIAAIYQAKFIKYLENRELQKKTNRKIFAFLGDGEMDEPESKGVLNIAAREKLDNLIFVINCNLQRLDGPVYGNGKIINELESIFKGAGWEVIKVIWGNTWENLLLKDKTGKLIELMNNTLDGDFQNFNSKNGSYIRKNFFGKFPETLELVKDLSDQEIEKLSYGGHDPKKIYTAFKKAYKIKNKPIVILFHTIKGFGLGKIAESKNIAHQIKKIDINTIKYIRDNLHIPINDKDLYKLPYLSFKKNSLEFKYLHNQRKKLGGYVPYRRINFTEKLVLPKLEDFNILFKKQNKISTTIIFVRILNILLRNKNISSRIVPIIADEARTFGMEGLFRQIGIYNSNGLKYTPQDKSLLTYYKEDIKGQILQEGINESGAFASWLAAATSYSTNNLPMIPFYIYYSIFGFQRIGDFCWAAGDQQARGFLIGATSGRTTLNGEGLQHEDGHSHIHSLTIPNCISYDPTYAYELAVIIHNGLKRMYGKKQENIYYYITTMNEFYDMPEINIKNINGICKGIYKIYSNKNIINKITIQLLGSGAILRNMFKAANILYYEYNINSDIFSVTSFTEIAREGQDCDHWNLLHPFEKRRIPYITNIMKNYPTVAATDYMKLFAEQIRKYVPTNNYFVLGTDGYGRSDSRQNLRDFFEINELYIVLAVLNILLDLNLITLKKILRFIKKYKININKNNPRTS
SIO_010081: GJU04_RS01035
subclass of: SO_0000673
so part of: GJU04_RS01035
location: 218070..220736
location: region:218070-220736:1
so has part: feature:218070-220736:1:exon

WP_168893054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218070-220736:1:exon

GJU04_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01040
old locus tag: GJU04_01035
so part of: sequence
location: 220749..222059
location: region:220749-222059:1
so has part: feature:220749-222059:1:exon
subclass of: SO_0000010

position:220749:1
position: 220749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222059:1
position: 222059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220749-222059:1:exon

GJU04_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01040
old locus tag: GJU04_01035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874163.1
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-oxo acid dehydrogenase subunit E2
translation: MYKKIKFPDTGIEEMKITDILVKEGDEILEEQSIMTVESDKTSIEIPSTQKGIIKKIFISIGNKIRKGDIILEILNNEKNNLIIDSNKILENNKIELDKLNFFNKNNQEIKESKILEKKNNIIRNNNLEKNKILNIEKKNYIYASPIIRKMARKLNINLENIKGSGLKNRITKEDILKYFDKNKKLDNNNFEKFSSIYTKFGSCEKIILNNIQKTTSKNLSNNWKNIPHVTQHIETDITELEKFRIKKNNEFHKQQKNIKLTLLSFIIKICAHALKKYPNFNSSLSDLNQNLIIKKYFNIGIAIDTKRGLLVPVIFDVLNKSINDVSKILLDLANKAKKNKLHPLDMQGGCFTISNLGQFKGSFFTPIINAPEVAILGISQANIKPIWNKNNNKFIPKLMLPLSLSYDHRVINGVEGINFLNYICMLISDIRNILI
SIO_010081: GJU04_RS01040
subclass of: SO_0000673
so part of: GJU04_RS01040
location: 220749..222059
location: region:220749-222059:1
so has part: feature:220749-222059:1:exon

WP_168893055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220749-222059:1:exon

GJU04_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lpdA
locus tag: GJU04_RS01045
old locus tag: GJU04_01040
so part of: sequence
location: 222111..223526
location: region:222111-223526:1
so has part: feature:222111-223526:1:exon
subclass of: SO_0000010

position:222111:1
position: 222111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223526:1
position: 223526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222111-223526:1:exon

GJU04_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lpdA
locus tag: GJU04_RS01045
old locus tag: GJU04_01040
EC number: 1.8.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874164.1
GO function: GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO process: GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrolipoyl dehydrogenase
translation: MNNVIKTQVVVIGGGPAGYSAAFRCSDLGLKTIIVENYKNLGGVCLNVGCIPSKTLLHIAKIIKENQNLLKNGIFNNIPEININNIIKFKYNIINKLTNGLNFLSKKRNVDIINGMGFFETENSLNIINYDSKTLKILFENAIIATGSHPIKLPFIPYEDHRIWNSTDALFLKKIPKKMLIVGSGIIGLEMATIYQSFGSKIDIVDISNNFLPEVDDDIMQVYKKNIQNKFNILLGTKVLSIDSNNLLQVHMTDNNKSIYSKQYDNIIIAIGRKPNSNYINKKFNKIKINNYGFINVDNQMRTNIPNIYAIGDVVGNPMLAHKGIHEGHLAAEVIAGKNHYFIPKVIPSIAYTNPEIAWVGITEKKAIKNNINYKIASFPWNSLGRAVSSNEEDGLTKLIVEKNSNRIIGGSIIGYNAGELLGEISLAIEMGCDIEDIALTIHAHPTFYESIGIAAEIYTGSVTDIININK
SIO_010081: GJU04_RS01045
subclass of: SO_0000673
so part of: GJU04_RS01045
location: 222111..223526
location: region:222111-223526:1
so has part: feature:222111-223526:1:exon

WP_168893056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222111-223526:1:exon

GJU04_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dapE
locus tag: GJU04_RS01050
old locus tag: GJU04_01045
so part of: sequence
location: complement(223640..224800)
location: region:223640-224800:-1
so has part: feature:223640-224800:-1:exon
subclass of: SO_0000010

position:223640:-1
position: 223640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224800:-1
position: 224800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223640-224800:-1:exon

GJU04_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dapE
locus tag: GJU04_RS01050
old locus tag: GJU04_01045
EC number: 3.5.1.18
inference: COORDINATES: protein motif:HMM:NF009557.0
GO function: GO:0009014 - succinyl-diaminopimelate desuccinylase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: succinyl-diaminopimelate desuccinylase
translation: MLKKIVNLTRQLIKCHSISPDDAGCQNILIKLLKKLNFNINLINIKDTNNFWAIHNNHKIMYNTLVFAGHTDVVPPGEVTKWKFDPFKAILDKNILYGRGVCDMKGSLAAMIFAAKKFITKYHDYNGRIAFLITSDEEGNATNGTIKIINHLLEKKEKLDFCILGEPTSNKIIGDNIKNGRRGSLNIKLKIIGIQGHVAYHNLAKNPIHMVIPLLHKLILINWSKKNNLFPETSMQITRISSDIKNNNIIPGNIIIFINFRFNNEICYQNILKTFNNIIRKYIIKYEIKWELSGLPFLSTSKNYIKEKNLIEIVKKSIYSINHIYPTLINNGGTSDGRFIIKTKAQIVELGLINSTIHKINEHVNINDLYILYKIYYKIIKKIFIF
SIO_010081: GJU04_RS01050
subclass of: SO_0000673
so part of: GJU04_RS01050
location: complement(223640..224800)
location: region:223640-224800:-1
so has part: feature:223640-224800:-1:exon

WP_168893057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223640-224800:-1:exon

GJU04_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lon
locus tag: GJU04_RS01055
old locus tag: GJU04_01050
so part of: sequence
location: complement(224827..227160)
location: region:224827-227160:-1
so has part: feature:224827-227160:-1:exon
subclass of: SO_0000010

position:224827:-1
position: 224827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227160:-1
position: 227160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224827-227160:-1:exon

GJU04_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lon
locus tag: GJU04_RS01055
old locus tag: GJU04_01050
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004156306.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MNSEHSEKIIIPVLPLRDVVVYPHMVIPLFIGRDKSIRCLEAAMNNDKKVMLVAQKDASNDNPSLNDLFTVGTITSILQMLKLPDGTVKILVEGLQRAKLTIVFDSDSYFTAQIEYLSSPILKTKEQEILIRTSINQFERYTKLNKKIPPEVLNSLNNINEAAKLADTIAAHLPLKLSNKQLILEMSNINERLEYLMAIMESEIDLLQIEKKIRNRVKNQMEKSQKEYYLNEQMKAIQKELGEIDEHPNENEILKKKIKLAKMPKEAKEKTYSELRKLKMMSPMSAEATVVRGYIEWMIQIPWNIKSRLKKKLYKAKKILDKDHFGLESVKEHILEYLAVQNRSNKIRGPILCLVGPPGVGKTSLGKSIARATGRKFIKIALGGIKDEGEIRGHRRTYIGSMPGKIIQKMVKAGVKNPLLLLDEIDKISYDMRGDPAAALLEVLDPEQNIAFNDHYLEIDYDLSNVMFVATSNSSIHIPLPLLDRMEVIKITGYTEDEKLNIAKKYLLPKQFNRNALKEKELIINDRAIIDIIRYYTRESGVRGLERVLSTLCRKTVKAILIEKNIKSIKIDCLNLKKYLGVKKFDYGKAENENLIGQVTGLAWTEVGGELLTIEAVCIPGKGKLTYTGSLGEVMQESIQTALTVVKARTKKLNINIEFYKNIDIHIHVPEGATPKDGPSAGISMCTVLVSSLTNNPVKANLAMTGEITLRGQVLAIGGLKEKLLAAHRGGINIVLIPEQNKKNLEDIPKNIITDLKILTVKNIEEVFLLALQNKPY
SIO_010081: GJU04_RS01055
subclass of: SO_0000673
so part of: GJU04_RS01055
location: complement(224827..227160)
location: region:224827-227160:-1
so has part: feature:224827-227160:-1:exon

WP_168893058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224827-227160:-1:exon

GJU04_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: clpX
locus tag: GJU04_RS01060
old locus tag: GJU04_01055
so part of: sequence
location: complement(227213..228472)
location: region:227213-228472:-1
so has part: feature:227213-228472:-1:exon
subclass of: SO_0000010

position:227213:-1
position: 227213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228472:-1
position: 228472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227213-228472:-1:exon

GJU04_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: clpX
locus tag: GJU04_RS01060
old locus tag: GJU04_01055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354380.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit ClpX
translation: MTYNKENVKIKFSCSFCKKNQDEVKKIISSNQSVFICDECVKLYYNILEEQSINKNNIFFKNKNLEFMTPHKIFDYLNNYIISQSHAKKILAVSVYNHYKKLNNYNKKNNIIEKSNILLLGPTGSGKTLLAETLARFLNVPFAITDATTLTEAGYVGEDVENIIQKLLQNANYDIKKTEYGIIYIDEIDKIARKSENVSLTRDVSGEGVQQALLKLIEGTIASVPPKGGRKHPQQDFIQINTKNILFICAGSFYGLEDIISNRINITTNIGFHSKTKKNINKIKNRYKLLKKVLPEDLIKFGLIPEFIGRLPIRVALNELNEKKLVQILLKPKNALIKQYKILFEYENIKLEFDNSAIKAIAKKSIVLNTGARGLRSILEKSLLNIMYDMPSIKNIYKIKINSEVIDNLSEPIIKYKKN
SIO_010081: GJU04_RS01060
subclass of: SO_0000673
so part of: GJU04_RS01060
location: complement(227213..228472)
location: region:227213-228472:-1
so has part: feature:227213-228472:-1:exon

WP_168893059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227213-228472:-1:exon

GJU04_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: clpP
locus tag: GJU04_RS01065
old locus tag: GJU04_01060
so part of: sequence
location: complement(228547..229173)
location: region:228547-229173:-1
so has part: feature:228547-229173:-1:exon
subclass of: SO_0000010

position:228547:-1
position: 228547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229173:-1
position: 229173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228547-229173:-1:exon

GJU04_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: clpP
locus tag: GJU04_RS01065
old locus tag: GJU04_01060
EC number: 3.4.21.92
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004905443.1
GO component: GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp endopeptidase proteolytic subunit ClpP
translation: MSYKKNNEIIQKNQINTIPIVIENTSIGERSYDIYSRLLKERIIFLTGPIEDNMANLIVAQILFLDSQNSQKDIFIYINSPGGIITSGMSIYDTMQFVNSDISTLCIGQACSMAAFLLASGKKKKRFCLPNSRIMIHQPLGSYQGQVTDIEIHTQEILRIKNSINKLMSLHTGKSISIIEKDTNRDRFLSAQEAIEYGLVDNIITSKK
SIO_010081: GJU04_RS01065
subclass of: SO_0000673
so part of: GJU04_RS01065
location: complement(228547..229173)
location: region:228547-229173:-1
so has part: feature:228547-229173:-1:exon

WP_168893060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228547-229173:-1:exon

GJU04_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01070
old locus tag: GJU04_01065
so part of: sequence
location: complement(229206..229487)
location: region:229206-229487:-1
so has part: feature:229206-229487:-1:exon
subclass of: SO_0000010

position:229206:-1
position: 229206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229487:-1
position: 229487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229206-229487:-1:exon

GJU04_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01070
old locus tag: GJU04_01065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BolA family protein
translation: MIIKKIKKKIISKLQPIYLKINDNSQYHNHINNNIKNLITHLEIIIVSNVFNKTTLITRHRLIYHILGKKINNIHSLSLNTYTLSEWEKFQNK
SIO_010081: GJU04_RS01070
subclass of: SO_0000673
so part of: GJU04_RS01070
location: complement(229206..229487)
location: region:229206-229487:-1
so has part: feature:229206-229487:-1:exon

WP_168893061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229206-229487:-1:exon

GJU04_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01075
old locus tag: GJU04_01070
so part of: sequence
location: complement(229596..230375)
location: region:229596-230375:-1
so has part: feature:229596-230375:-1:exon
subclass of: SO_0000010

position:229596:-1
position: 229596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230375:-1
position: 230375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229596-230375:-1:exon

GJU04_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01075
old locus tag: GJU04_01070
inference: COORDINATES: protein motif:HMM:NF012673.2
GO process: GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inositol monophosphatase family protein
translation: MRYPMLNIAIRIIRNIGNFIIKNYEIQSINIFDSNYDSNIFIKKINKNLINIITKIFYNIYSKNIIILNKENFFIIKYKKTTWIINPLDGIMNFLKKIPHFSISIAICIKEKTEIALIYDPLKNDLFTAIRGKNAQLNGYKLRCDIYNKENNFLLFALNTNYFFLKKNNINLFNLFKNNLIGIRISGSLSLDLAYLAANKINCYINNNVKNFNYLLAGELIIKESGGLITDFIGNYNYKNSSNILAGNSNIIKLVISNI
SIO_010081: GJU04_RS01075
subclass of: SO_0000673
so part of: GJU04_RS01075
location: complement(229596..230375)
location: region:229596-230375:-1
so has part: feature:229596-230375:-1:exon

WP_168893062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229596-230375:-1:exon

GJU04_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01080
old locus tag: GJU04_01075
so part of: sequence
location: 230564..231139
location: region:230564-231139:1
so has part: feature:230564-231139:1:exon
subclass of: SO_0000010

position:230564:1
position: 230564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231139:1
position: 231139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230564-231139:1:exon

GJU04_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01080
old locus tag: GJU04_01075
inference: COORDINATES: protein motif:HMM:NF013286.2
GO function: GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifU family protein
translation: MLQITQSAQEYFLKLLSKKNKNICIRISVLIKNNIFKGNVSFCNIQKIKNNDIKLNFKKLNIFVEYSSSKFLEDIKIDFIKKKLSTKLEFIILNNKKIKNIKNIKNLKKDINNFLKNIINPKLLNHGGFIILKNITINNILLLEFHGGCQGCSMSNHTLKNWIEKEIIYNFPKIKGVLDVTSHKKNKFSYY
SIO_010081: GJU04_RS01080
subclass of: SO_0000673
so part of: GJU04_RS01080
location: 230564..231139
location: region:230564-231139:1
so has part: feature:230564-231139:1:exon

WP_168893063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230564-231139:1:exon

GJU04_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: metA
locus tag: GJU04_RS01085
old locus tag: GJU04_01080
so part of: sequence
location: 231258..232148
location: region:231258-232148:1
so has part: feature:231258-232148:1:exon
subclass of: SO_0000010

position:231258:1
position: 231258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232148:1
position: 232148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231258-232148:1:exon

GJU04_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: metA
locus tag: GJU04_RS01085
old locus tag: GJU04_01080
EC number: 2.3.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015841906.1
GO function: GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine O-succinyltransferase
translation: MPVIVPKQLPAINFLKKENIFLLIKSKKYQKHSNSLKILFLNLMFKKIETENQIIRLLSNSSLFIDLSLLSIRDNKSSNDLSINHINKFYLNLDQIDNKYYDGLIITGAPLGLINFTDIRYWKEFVKIIHWAKEHVNSIFSICWSVQAILNILYNIPKKINKSKILGIFKHKILLKKNFLVQGFDDYFFVPHSRYSDFSLNFIKHYTDFKIISYSRKAGVYIFSSNDNKYIFITGHPEYDALTINQEYLNDLQNGLNINIPYNYYPFNNQKLIPKNNWRSHGNLLFLNWLNYLFYK
SIO_010081: GJU04_RS01085
subclass of: SO_0000673
so part of: GJU04_RS01085
location: 231258..232148
location: region:231258-232148:1
so has part: feature:231258-232148:1:exon

WP_168893064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231258-232148:1:exon

GJU04_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01090
old locus tag: GJU04_01085
so part of: sequence
location: 232200..233954
location: region:232200-233954:1
so has part: feature:232200-233954:1:exon
subclass of: SO_0000010

position:232200:1
position: 232200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233954:1
position: 233954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232200-233954:1:exon

GJU04_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01090
old locus tag: GJU04_01085
EC number: 6.1.1.15
inference: COORDINATES: protein motif:HMM:TIGR00409.1
GO function: GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MLTTKYLFFTSKNKILDNNINSHSLMIKAGMIRKLSSGIYTWLPTGLKVINNFKKIIHYFMKDIGAIELLLPILHPSNIWEQSGRINDYGDELLKTLDRRKHSFILGPTHEEVITYLIKNEIKSYKYLPIHLYQIQTKFRDEIRSRLGVIRAKEFLMKDSYSFHMDDFSLKETYNIVLKTYKKIFNIININFLVKKADNNVIGGDISHEFHIFSQNGENSIYLSKDKKLFFNKKLGEYFIYKKNNINKKKILKKKILNLKNCLNYESLAKICNSSIKNIIKTNIIQTSDKINPFIALLIRADYKLNLHKIKKINNKIIKILSEIEIKKFFNININSIGPFNLKIPIIGDYSIVNMYNFIIGANIKDKYLININWKINLPIPSNIQDLRGITKNNLMLDNKNLVKIKRSIEIAHIFQIGKKYSKIMNAYLYDKNKIKKPIYMGCYGIGISRLIAAIIEQNYDSQGIYWPNSLLAPFLVAIIPININKYFIVEKYSFLLYKKFKLLGINVILDNRNLNPGAMFADIDLIGVPHIIIINYDNILGKNIEYKDRKTGLKNIISIDLIVDFIFNKIKLNKCFNIFFSKR
SIO_010081: GJU04_RS01090
subclass of: SO_0000673
so part of: GJU04_RS01090
location: 232200..233954
location: region:232200-233954:1
so has part: feature:232200-233954:1:exon

WP_168893065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232200-233954:1:exon

GJU04_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tilS
locus tag: GJU04_RS01095
old locus tag: GJU04_01090
so part of: sequence
location: complement(233929..235263)
location: region:233929-235263:-1
so has part: feature:233929-235263:-1:exon
subclass of: SO_0000010

position:233929:-1
position: 233929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235263:-1
position: 235263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233929-235263:-1:exon

GJU04_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tilS
locus tag: GJU04_RS01095
old locus tag: GJU04_01090
EC number: 6.3.4.19
inference: COORDINATES: protein motif:HMM:TIGR02432.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MLIEKKTQEILYKYKKILIAYSGGIDSTVLLYNLFKLRNKYSLLLRAIHINHNLNYKSTFWMKQCFLQCKKWNISFIYKNIYIKHKNNIEQYARKKRYQIFKNIIYKNEILVTAHHLDDQCENFFLFLKRGSGPKGLSGISKIKIFDNLILFRPLLKISKKQIICYAIKKKLKWIEDPSNKNIKYDRNFLRNIILPKITTRWPFFKNAVIRSIQNYKEQEELLTDLINPILIKLIQKDNSLFIKPLYNFNIIKRNFIMRKWIEYNKYYYMPSRKILSIIWNEIVCCKNHNTPQIKIGQYIIRKYKNYLYCIKYFPNLQKNTILVWDNINIPLILPNKLGKLIILNLNLNYKKESIYIRKPHNNEIIYIRFNISEKCYFNGIKNKKNINYIWKKLSVPKWKRDQIPLLFYNNILIAELEHKLVTKEGIASIFKKDNFFIFWKKIY
SIO_010081: GJU04_RS01095
subclass of: SO_0000673
so part of: GJU04_RS01095
location: complement(233929..235263)
location: region:233929-235263:-1
so has part: feature:233929-235263:-1:exon

WP_168893066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233929-235263:-1:exon

GJU04_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dnaE
locus tag: GJU04_RS01100
old locus tag: GJU04_01095
so part of: sequence
location: complement(235302..238850)
location: region:235302-238850:-1
so has part: feature:235302-238850:-1:exon
subclass of: SO_0000010

position:235302:-1
position: 235302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238850:-1
position: 238850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235302-238850:-1:exon

GJU04_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dnaE
locus tag: GJU04_RS01100
old locus tag: GJU04_01095
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874195.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MYENFKIKNMNYPKFIHLHVHSDYSIKDGLAKIKQILKKSVLLNMPAIAITDLNNIFGLIKFYKIAHELGLKAIIGVDLKIKNFENINSNKYSILTILAMNNIGLQNIKLLIFYAYKDGYNDDLGPVINYNLLKKYNKGLIILSGSLQGEIGINILKENFFLINKIINFFKKYFYNCFYFEITRTNYDNEEIYINSILKLSQYFSIPIVATNNVRFLNKEDFYHHQIRVAINKGYNLNQINKKSLYNKEQFLKNTEEMCSLFKDIPEALSNSVEISKRCNVFLSFGKYFLPKFYIKKNISPEKYIVKKSYISLEKKLKILYPESNLFKIKKNIYQKRLNHELNIINKMGFPSYFLIVMEFVKWAKKNNIPVGPARGSGAGSLVAYVLDITNLDPIKFDLIFERFLNMERISLPDFDIDFCMEKRDLVINHVKEIYGKELVFQIITFGTMTAKSVIRDVGRVLGYPYDFINRISKLIPFDLGINLKKAFMNNKKLSDLYKSDNNIKELVITSIKLEGTIRNIGKHAGGIVISPDNIIKYTTIYCDYNGENIVTQFDKNDIEEIGLVKFDFLGLRTLTVINHSVNMINKKLIKDNKKLIDINNIILDDKKIFNFLKLAKTTGIFQLESKGIKKLIKQLKPDNFEDLIALLALFRPGPLQSGMVENFINRKHGKEIISYPDKNWQHKKLKPILQSTYGVILYQEQVMKIAQVLAGYSLGEADILRRVISKKQHKEMEKQRKRFLYGAKKLEINTTLSMKIFDFLEKFASYGFNKSHSAGYALISYQTLWLKLYYPSEFMAAVLTSEMDNINKIIYLINECKNLKINILPPNINNSLYKFHVDKNGNIIYGLGAIKGIGQQQAYNILKARKKNGYFKSIFDFFTKINFKKINKRVIEVLILSGSLDDFNFNRGLLINNLEKITKIINKYLEEKKTGQIDFFNKKNKVLLEDNKYLDNNINLFWTKKNILIKEKNILGCYLTGHPLKGYLKEILFYTKENNIQNNLINFKKTNRIPKRITIGGIISNIRTFYNTKKQKFLFFDLDDSSDIIEIHLSLDMINNNNIIILNNIIIINGILYFNNLLKLFICDANSILKITTARKKYLNSINVIFINKKILKNMFFLKNLKKILFFKKKNIKNIPIYFFYKSSNIKNKIFYKKSYFLSIEENNFDKFINLLDNNIKLEFN
SIO_010081: GJU04_RS01100
subclass of: SO_0000673
so part of: GJU04_RS01100
location: complement(235302..238850)
location: region:235302-238850:-1
so has part: feature:235302-238850:-1:exon

WP_246208777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235302-238850:-1:exon

GJU04_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: fabZ
locus tag: GJU04_RS01105
old locus tag: GJU04_01100
so part of: sequence
location: complement(238829..239269)
location: region:238829-239269:-1
so has part: feature:238829-239269:-1:exon
subclass of: SO_0000010

position:238829:-1
position: 238829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239269:-1
position: 239269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238829-239269:-1:exon

GJU04_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: fabZ
locus tag: GJU04_RS01105
old locus tag: GJU04_01100
EC number: 4.2.1.59
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499946.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-hydroxyacyl-ACP dehydratase FabZ
translation: MSDINELLSNLPHRYPFILVDRIIAFKKFTFLNAIKNISINEPYFQGHFPQNPIYPGVLLLESMIQTSVLLLYKSINNKKLKKNIFYYLTGIDKVRFKKPAFPGDQIMIESNLEKQKNSLIFFNNTAKINNKIICQSKIICMKILK
SIO_010081: GJU04_RS01105
subclass of: SO_0000673
so part of: GJU04_RS01105
location: complement(238829..239269)
location: region:238829-239269:-1
so has part: feature:238829-239269:-1:exon

WP_168893067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238829-239269:-1:exon

GJU04_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01110
old locus tag: GJU04_01105
so part of: sequence
location: complement(239345..239863)
location: region:239345-239863:-1
so has part: feature:239345-239863:-1:exon
subclass of: SO_0000010

position:239345:-1
position: 239345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239863:-1
position: 239863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239345-239863:-1:exon

GJU04_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01110
old locus tag: GJU04_01105
inference: COORDINATES: protein motif:HMM:NF015871.2
GO function: GO:0051082 - unfolded protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpH family outer membrane protein
translation: MKYLLKIILLMTILIVPFNNAYCCSKIVIINIAKIFYAIPQKNNMSKKLEQELRSDFLEIEKMKKIFLSKIEKLKNTKLSKKDREIIKKEILYDKNILLKKIKFFTKKNAQKQEQARNKILIFIYNLINIIAKKGKYNLVLDASAVAYMKNVKDITNDVIDLANQQKNVFSF
SIO_010081: GJU04_RS01110
subclass of: SO_0000673
so part of: GJU04_RS01110
location: complement(239345..239863)
location: region:239345-239863:-1
so has part: feature:239345-239863:-1:exon

WP_168893068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239345-239863:-1:exon

GJU04_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: bamA
locus tag: GJU04_RS01115
old locus tag: GJU04_01110
so part of: sequence
location: complement(239903..242395)
location: region:239903-242395:-1
so has part: feature:239903-242395:-1:exon
subclass of: SO_0000010

position:239903:-1
position: 239903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242395:-1
position: 242395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239903-242395:-1:exon

GJU04_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: bamA
locus tag: GJU04_RS01115
old locus tag: GJU04_01110
inference: COORDINATES: protein motif:HMM:TIGR03303.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamA
translation: MILNSFNKKKYFLKIFKYYKYILIFLLFFNINNICYSAILKKKSCIKNIIYFGLNKIKLQDLGISCYKDIKKCISLKEISNIMHILYITNMVNNINVFQNKNFIFVKITEKPIINNIIVKGNKIINNNIIYYLLNELKIKKGQILNNNLLFFFRKNIELFFFRSSMFSSFIRIKILKNKNNKVNILITLKEDGFAKINQINIIGNNNYSTNFLLNHLKINNNFLFVFSKKNKYEISYIIKILDKLKNFYINNGYVKFKIQNIIQNLSFNKKNVYLIIKIKEDKRYFYNKILLDIDQKKYYKHIKNIINIIPGTIYQNKKIIDLKYKIKNFLEKNGFLDSQIMIKTILDDKNNKINIIFKINTNRQYYVRKINFLGNNFTKDSILRNELLQIEGNLINIELIKKTKDKLFSLGYFNKVEIFFHKNHDLNNTIDVLYQVDEKNEGFLKSGLGMIQGGLLAFNTILQQNNFIGTGYDIDINFSKDFYHSYLQFFIMKNHLFFKKINAGIKIFLNTINEDDNLFYNYINKNQGFFGILKFPINNNYTITNSIGFIQNHISNIEPELYLWNYLRYIGYKMYNKLYNHYLLDEFIVNYSFLYSNLKNLDIIPENGILSSLKTYFSIPWYSKNRNFKINFNYSRYIPLNLQIFKSYFKNNPVVFLFKSHFGYGNGFLGGKYPFYKNFYLGGSNTIRGFQTNSIGPKAIYYSSKKYRCNNGQTICLSNNSIGGNFLFNFNNELIIPISFLDNQYIEQIKSSLFLDIGNLIDTSWKNNYLFKLYKIPNFNIFSQIRSSIGLSFQFHTPFGDVNISFAYPFTKYKTDKTQFFQFNFLKKW
SIO_010081: GJU04_RS01115
subclass of: SO_0000673
so part of: GJU04_RS01115
location: complement(239903..242395)
location: region:239903-242395:-1
so has part: feature:239903-242395:-1:exon

WP_168893069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239903-242395:-1:exon

GJU04_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rseP
locus tag: GJU04_RS01120
old locus tag: GJU04_01115
so part of: sequence
location: complement(242376..243737)
location: region:242376-243737:-1
so has part: feature:242376-243737:-1:exon
subclass of: SO_0000010

position:242376:-1
position: 242376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243737:-1
position: 243737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242376-243737:-1:exon

GJU04_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rseP
locus tag: GJU04_RS01120
old locus tag: GJU04_01115
inference: COORDINATES: protein motif:HMM:NF014244.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RIP metalloprotease RseP
translation: MFNILYDIIIFIITISSLIIIHEYGHFYIARSFNIYIECFSVGFGKKIFQYRDKYGTNYVLRLIPLGGYVKIPDIISNDNIKYIKKFKLLFFKKISFFKQLLIILGGPIANIIFAILVYWIIFFIGLPIKKNTINEINYTSIANIIGLKSNLEIKKINNVTINSWNFLNLELNQFINLNKKINLEINKKNYNLIKNKKLNIDNNFIKFSKEKNLILMLGIIPKGLKINPIITYIIPGSPADKSKLHIGDKILSIEGKKFINWYNFQKLIYNNPNKFIHLKIKRKQQNMNFIILTSFRKYKKNGFLGFLPQIISIKDTSKSIYKLNLIKSLKKSISETLKSIKLILNSFIYLLNNKKNIYRLNGPISIGHIASILVRNNFIYYFMFLALININLSIINLFPIPILDGGQLLFLIYEKIIGKKISNKIKQFIYTISIVILTIIMGFTFINDFKQF
SIO_010081: GJU04_RS01120
subclass of: SO_0000673
so part of: GJU04_RS01120
location: complement(242376..243737)
location: region:242376-243737:-1
so has part: feature:242376-243737:-1:exon

WP_168893070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242376-243737:-1:exon

GJU04_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: uppS
locus tag: GJU04_RS01125
old locus tag: GJU04_01120
so part of: sequence
location: complement(243817..244554)
location: region:243817-244554:-1
so has part: feature:243817-244554:-1:exon
subclass of: SO_0000010

position:243817:-1
position: 243817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244554:-1
position: 244554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243817-244554:-1:exon

GJU04_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: uppS
locus tag: GJU04_RS01125
old locus tag: GJU04_01120
EC number: 2.5.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354149.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl diphosphate synthase
translation: MKINKISKEKNNIISYPNHIAIIMDGNRRWAKKNKKLNFLGHRKGVKTVKKIIGLCLKYNIKALTLYAFSSENWKRSSDEVTFLMDLFKEILDIETKNLEKKKIRLKIIGNKNKFNFSLQKAIIKAENLTKNNNNLLLNIAANYGGRWDIVNSVKKIVVDINKGLLNPENINEKIINNYICLNDISPVDLVIRTGGEYRISNFLIWQIAYSELYFTKKLWPDFNKKDFKKALNSFIKRNRRFGGD
SIO_010081: GJU04_RS01125
subclass of: SO_0000673
so part of: GJU04_RS01125
location: complement(243817..244554)
location: region:243817-244554:-1
so has part: feature:243817-244554:-1:exon

WP_168893071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243817-244554:-1:exon

GJU04_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01130
old locus tag: GJU04_01125
so part of: sequence
location: complement(244646..245197)
location: region:244646-245197:-1
so has part: feature:244646-245197:-1:exon
subclass of: SO_0000010

position:244646:-1
position: 244646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245197:-1
position: 245197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244646-245197:-1:exon

GJU04_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01130
old locus tag: GJU04_01125
inference: COORDINATES: protein motif:HMM:NF013891.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome recycling factor
translation: MYNNIINDNKKNMQKCIDLFIDKINNLSQTRLSPYLLNNISLKLNNKSILIHHISSIVVENSSTLKITPFDYTIIKNIEKSIILSNLDVTTKIIDSSIYVKMPIMTETRKIKIFKNIKIEAEFNRINIRNIRRKTNNKIKFCLKNKDIDENQEQKLYSIVQKQTTFYINYIKEFLKKKEKELF
SIO_010081: GJU04_RS01130
subclass of: SO_0000673
so part of: GJU04_RS01130
location: complement(244646..245197)
location: region:244646-245197:-1
so has part: feature:244646-245197:-1:exon

WP_168893072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244646-245197:-1:exon

GJU04_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: pyrH
locus tag: GJU04_RS01135
old locus tag: GJU04_01130
so part of: sequence
location: complement(245231..245959)
location: region:245231-245959:-1
so has part: feature:245231-245959:-1:exon
subclass of: SO_0000010

position:245231:-1
position: 245231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245959:-1
position: 245959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245231-245959:-1:exon

GJU04_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: pyrH
locus tag: GJU04_RS01135
old locus tag: GJU04_01130
EC number: 2.7.4.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053753.1
GO function: GO:0033862 - UMP kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UMP kinase
translation: MNIKTKIIYDRIILKISGEFLQGKNLSGIDNKLLDYIIKEVKSILPLGIEIAIVIGGGNLFRGKYCNGNNNLKRVLGDQIGMLSTIINGLLLYQSIKNKLINVYLMSSLPIQGICKEYNAFEAMDLIKKNIIVLTGGIGNPLFTTDTTACLRGIELEANAILKATKVNGVYSKDPINYSNAKFFDKIDYDYVIKKKIKIMDNTAFILARDYNVPIHIFNIQKPGSLYRILTGKLEGTVIKNN
SIO_010081: GJU04_RS01135
subclass of: SO_0000673
so part of: GJU04_RS01135
location: complement(245231..245959)
location: region:245231-245959:-1
so has part: feature:245231-245959:-1:exon

WP_168893073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245231-245959:-1:exon

GJU04_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tsf
locus tag: GJU04_RS01140
old locus tag: GJU04_01135
so part of: sequence
location: complement(246020..246826)
location: region:246020-246826:-1
so has part: feature:246020-246826:-1:exon
subclass of: SO_0000010

position:246020:-1
position: 246020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246826:-1
position: 246826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246020-246826:-1:exon

GJU04_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tsf
locus tag: GJU04_RS01140
old locus tag: GJU04_01135
inference: COORDINATES: protein motif:HMM:TIGR00116.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor Ts
translation: MKIDINKIKELRNITNISIIECKKALIVTKGDINKAIDYIRKYAKIESIKKSKNKTKEGLILDYITKDFGILLEINCQTDFVAKSSQIIKFGKNILTYVFKHQQVNISILRKIFNQERINLIGILKENIYINRLGYIQGKFIGKYIHHSKRIGVIIRSNIDNDLLMKQISMHIAMLQPDYISEKNIPENIINHEYDLQKSIALKNNKSKIIIKKIIEGRVKKFINNITLYNQKFLLDNNKTVFHFLNENNMKIFEFICFELGSNIIKN
SIO_010081: GJU04_RS01140
subclass of: SO_0000673
so part of: GJU04_RS01140
location: complement(246020..246826)
location: region:246020-246826:-1
so has part: feature:246020-246826:-1:exon

WP_168893074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246020-246826:-1:exon

GJU04_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsB
locus tag: GJU04_RS01145
old locus tag: GJU04_01140
so part of: sequence
location: complement(246840..247550)
location: region:246840-247550:-1
so has part: feature:246840-247550:-1:exon
subclass of: SO_0000010

position:246840:-1
position: 246840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247550:-1
position: 247550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246840-247550:-1:exon

GJU04_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsB
locus tag: GJU04_RS01145
old locus tag: GJU04_01140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499939.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S2
translation: MMSISINKMFKVGAHFGHQTRYWNPKMKKFIFKYKNKIHIINLDKTVLMFNNALKELKKISSRKGKILFIGTKKAASNLIKETAINCNQFFVNHRWLGGMLTNWKTVKQSIKKLKELSLQKKNGMFKQLIKKEVLTRNRELLNLEKSLGGIKNMGGLPDAIFVIDANYEKIAIKEAKKLNIPIFAIVDTNSNPEGINFVIPANDDAIRAIKLYLYYVTKAISNNNLNINNKKEFIN
SIO_010081: GJU04_RS01145
subclass of: SO_0000673
so part of: GJU04_RS01145
location: complement(246840..247550)
location: region:246840-247550:-1
so has part: feature:246840-247550:-1:exon

WP_168893278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246840-247550:-1:exon

GJU04_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: map
locus tag: GJU04_RS01150
old locus tag: GJU04_01145
so part of: sequence
location: 247712..>248309
location: region:247712-248309:1
so has part: feature:247712-248309:1:exon
subclass of: SO_0000010

position:247712:1
position: 247712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248309:1
position: 248309
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247712-248309:1:exon

GJU04_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: map
locus tag: GJU04_RS01150
old locus tag: GJU04_01145
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053750.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MKILIKNSKEIKKINKSCQLAAEVLEMIENYILPGISTEEINNICHNYITKIQKAKPATLGYNGFPKSICISKNDIVCHGISNKNDILKQGDIVNIDVTVLYNNYYGDTSKMFFVGNKISTKSKLLCLTAQKSLYKAISILKPGIRLYKIGQVIQKYVESKNFSVVRNYCGHGIGKNFHEDPQILHYEAYDYGILLKPG
SIO_010081: GJU04_RS01150
subclass of: SO_0000673
so part of: GJU04_RS01150
location: 247712..>248309
location: region:247712-248309:1
so has part: feature:247712-248309:1:exon

WP_168893075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247712-248309:1:exon

GJU04_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01155
old locus tag: GJU04_01150
so part of: sequence
location: <248407..248677
location: region:248407-248677:1
so has part: feature:248407-248677:1:exon
subclass of: SO_0000010

position:248407:1
position: 248407
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:248677:1
position: 248677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248407-248677:1:exon

GJU04_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01155
old locus tag: GJU04_01150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070197.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 2
transl table: 11
product: M24 family metallopeptidase
translation: IGKNFHEDPQILHYEAYDYGILLKPGMVFTIEPMINIGHHDVYLANDNWTVRTKDKTNSAQYEHTILITNIGKKILTLRKEEKSIFKNI
SIO_010081: GJU04_RS01155
subclass of: SO_0000673
so part of: GJU04_RS01155
location: <248407..248677
location: region:248407-248677:1
so has part: feature:248407-248677:1:exon

WP_168893076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248407-248677:1:exon

GJU04_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpoD
locus tag: GJU04_RS01160
old locus tag: GJU04_01155
so part of: sequence
location: complement(248746..250551)
location: region:248746-250551:-1
so has part: feature:248746-250551:-1:exon
subclass of: SO_0000010

position:248746:-1
position: 248746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250551:-1
position: 250551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248746-250551:-1:exon

GJU04_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpoD
locus tag: GJU04_RS01160
old locus tag: GJU04_01155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003848431.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MDHNSKSQLKILITLGKEKGYLTYSEVNDHLPDNIINSDQIKNIIQMINDMGIQVMEEAPDNDDLILNNSTNNLTASEDAVQVLSNVESEMGKTTDPVRIYMREMGTVELLTREGEINIAKRIEEGINQIQYSIAGYPYTIEYLLNKYNKVKSGDIRLTDIIHGFINYDIKEKIISSSNHQELSNNIQTENNENIIDFNLAKEKFLELEKQYYITLIFIKKKGRNHHQSLIELKNLAEIFKKFRLVSKEFNYLVSKIRSIMFHIRIEECNIIKICLKKYNISKKKFVHIFRNNETNKDFFFKKLKNFKLKNQFYLHNETNFFNKINKSIIKLINIEKKTGLTIREIRDINKKISRGELKAQRAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVSRKILQELGREPTPEELSEYMLIPEDKIRKVLKIAKEPISMETPIGDDDESHLSDFIEDNSLELPLDSATSESLKTATYNILSSLTPREAKVLRMRFGIDMNSDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEILKSFLDN
SIO_010081: GJU04_RS01160
subclass of: SO_0000673
so part of: GJU04_RS01160
location: complement(248746..250551)
location: region:248746-250551:-1
so has part: feature:248746-250551:-1:exon

WP_168893279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248746-250551:-1:exon

GJU04_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dnaG
locus tag: GJU04_RS01165
old locus tag: GJU04_01160
so part of: sequence
location: complement(250688..252421)
location: region:250688-252421:-1
so has part: feature:250688-252421:-1:exon
subclass of: SO_0000010

position:250688:-1
position: 250688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252421:-1
position: 252421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250688-252421:-1:exon

GJU04_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dnaG
locus tag: GJU04_RS01165
old locus tag: GJU04_01160
inference: COORDINATES: protein motif:HMM:TIGR01391.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MVRYIPRLFINNLLDQVDIVYLIKNKIKLKKKGKNFFGICPFHLEKNPSFVVNSIKQLYHCFGCGLHGNIIDFVMKYDNLSFLESIESIANTFNIPIIYNNQSNILQKIFQKNRIYYKLIYNLSIFYNNSLLTSLGKEAYSYLLNRGLNLYIIKYFSIGFSPLHWQKKILNNKKVIKILYEKLGILKKNTRSNNFYDIFYNRIIFPIKNIKGFIIGFGGRVFNNINPKYLNSSENNIFHKSKELYGLYETKKENNIIKKILIVEGYIDVISLFQFNIKYAVAILGTTITNIHIKKLFSITNKIIFCFDGDKAGIAAQWKSLKISLPHLVNGKEIKFIILPNGEDPDSLIRKEGQILFEKRIKNNLSFSKFFFKQLLSKNLFSSCEEKTNFIYKALSFIKLIPDYFFQINLIKKLGEKTGILNLVDIYNSLKLKKKIVIHNNFKKTTIRILLSVLIQNPKLIKFVPKLKFFKSSNINGLVFLIKFVNFYKNKDITTVNILEQYRGTKLKKILEILVTWNHMIPDNKIEKFFINLINKLKINILEDRIDYLISLDRRKGLNYKKKKELWSLNQILIKKK
SIO_010081: GJU04_RS01165
subclass of: SO_0000673
so part of: GJU04_RS01165
location: complement(250688..252421)
location: region:250688-252421:-1
so has part: feature:250688-252421:-1:exon

WP_168893077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250688-252421:-1:exon

GJU04_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsU
locus tag: GJU04_RS01170
old locus tag: GJU04_01165
so part of: sequence
location: complement(252468..252683)
location: region:252468-252683:-1
so has part: feature:252468-252683:-1:exon
subclass of: SO_0000010

position:252468:-1
position: 252468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252683:-1
position: 252683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252468-252683:-1:exon

GJU04_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsU
locus tag: GJU04_RS01170
old locus tag: GJU04_01165
inference: COORDINATES: similar to AA sequence:RefSeq:NP_311975.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MPIIKVRDNEPFDLALRRFKRSCEKAGILAEVRRREFYEKPTTERKRAKASAIKRHAKKISRENAKRVRLY
SIO_010081: GJU04_RS01170
subclass of: SO_0000673
so part of: GJU04_RS01170
location: complement(252468..252683)
location: region:252468-252683:-1
so has part: feature:252468-252683:-1:exon

WP_168893078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252468-252683:-1:exon

GJU04_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tsaD
locus tag: GJU04_RS01175
old locus tag: GJU04_01170
so part of: sequence
location: 252831..253838
location: region:252831-253838:1
so has part: feature:252831-253838:1:exon
subclass of: SO_0000010

position:252831:1
position: 252831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253838:1
position: 253838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252831-253838:1:exon

GJU04_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tsaD
locus tag: GJU04_RS01175
old locus tag: GJU04_01170
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070275.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MGIETSCDDTAVAIYTKSIGILCNNIYTQKIHSKYGGVVPELAARNHLKKIIPLIKKSLIKIKKKLNDINAIAYTSGPGQINSLIIGAIISHTLAFSLNIPVIPVNHMEGHLFSIMLQKKKPILPFIGLLISGGHTQLIYTYKFGKYKILGTNIDDAVGETLDKISKLLGLDYPGGKNLFKLSKYGTKKKFFFPRPMTLKKNNLNFSFSGLKTFVTNFIKKQNLNNFKIKADIACGLEDAVIETLYIKSLWALKKYNINQLVIAGGVSSNQKLRKFFYKNLKKNNIKLFYSNKKLCTDNAAMIAYVGAKKFFSKKNKYVLNDISINSKLSLEDKI
SIO_010081: GJU04_RS01175
subclass of: SO_0000673
so part of: GJU04_RS01175
location: 252831..253838
location: region:252831-253838:1
so has part: feature:252831-253838:1:exon

WP_246208778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252831-253838:1:exon

GJU04_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01180
old locus tag: GJU04_01175
so part of: sequence
location: 253911..254717
location: region:253911-254717:1
so has part: feature:253911-254717:1:exon
subclass of: SO_0000010

position:253911:1
position: 253911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254717:1
position: 254717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253911-254717:1:exon

GJU04_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01180
old locus tag: GJU04_01175
EC number: 3.6.1.27
inference: COORDINATES: protein motif:HMM:NF014703.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphate phosphatase
translation: MLLNYFSCIILSIIQGLTEFLPISSNAHIIIFSKILNIIENNNFKFFKIIIQLGSSLAILIFFWHKIIKIISNTIKYNFFFKKKTNIFHIFISMLPIIFIGLIFYKNIKMINNINYIIYGLLIGSILLYISEKFKPIKYKINSIDYISYINNFFIGCFQCLALLPGVSRLGATLSISLLLGIKRTVATKFCFIISIPIIFGANLLELYKNYTIINFYNIKIFFIGFLISFFISLIIIKKFIYIINNIAFKWFILYRLFLIIILLLFLN
SIO_010081: GJU04_RS01180
subclass of: SO_0000673
so part of: GJU04_RS01180
location: 253911..254717
location: region:253911-254717:1
so has part: feature:253911-254717:1:exon

WP_168893080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253911-254717:1:exon

GJU04_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01185
old locus tag: GJU04_01180
so part of: sequence
location: complement(254739..255968)
location: region:254739-255968:-1
so has part: feature:254739-255968:-1:exon
subclass of: SO_0000010

position:254739:-1
position: 254739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255968:-1
position: 255968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254739-255968:-1:exon

GJU04_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01185
old locus tag: GJU04_01180
EC number: 2.7.7.72
EC number: 3.1.3.-
EC number: 3.1.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006814126.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004810 - CCA tRNA nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multifunctional CCA addition/repair protein
translation: MKIYLVGGAIRDDLLNIKVTDKDWVVVGSNINLMLKLGFKLVGKDFPVFLHPKTHEEYALARTEYKFGHGYKGFKYCASSKVTLKEDLLRRDLTINAIAKDELGNFYDPYNGLQDIKNRLLKHVSSSFQDDPLRVLRVARFAAKLKYLNFRIDDNTLKLMKIMSHSGELSYLKPERIWKETYNALQSTHPQVFFKVLKKCNALSIIFPEINALYGIPAPLKWHPEIDTGIHTMLTLKIISKLTNNVSTRFATLCHDIGKGLTPKKLWPRHPGHGEAGIPLIKKLCDRLKIPSNFKKISILAARIHDIIHNIYNQKPEDILNIYNIIDAWRKPERVQQMAFISEADARGRLTLESIEYKQGKYFINMYKYISKLNIKNILNNNNLKGYNINKKIQSERIKLIKYFLKMEN
SIO_010081: GJU04_RS01185
subclass of: SO_0000673
so part of: GJU04_RS01185
location: complement(254739..255968)
location: region:254739-255968:-1
so has part: feature:254739-255968:-1:exon

WP_168893081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254739-255968:-1:exon

GJU04_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ribB
locus tag: GJU04_RS01190
old locus tag: GJU04_01185
so part of: sequence
location: 256119..256766
location: region:256119-256766:1
so has part: feature:256119-256766:1:exon
subclass of: SO_0000010

position:256119:1
position: 256119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256766:1
position: 256766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256119-256766:1:exon

GJU04_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ribB
locus tag: GJU04_RS01190
old locus tag: GJU04_01185
EC number: 4.1.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499227.1
GO function: GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3,4-dihydroxy-2-butanone-4-phosphate synthase
translation: MNILDTEFGNYKIRIKNAISSLKKGCGILILDDKKRENESDIVFAAENISVSNIAFSIRYGSGIICLCITENLRKKLKLPMMVKKNTSIYKTGFTVSIEAAKGISTGVSAKDRYTTIKTAISNNVVPEDLNKPGHVFPLMAVNGGLLNREGHTEATIDLLKIAKMKPTGVLCELTNRDGSMAKIFDTISFAKKNKMILITINDIKKYVMKNNIII
SIO_010081: GJU04_RS01190
subclass of: SO_0000673
so part of: GJU04_RS01190
location: 256119..256766
location: region:256119-256766:1
so has part: feature:256119-256766:1:exon

WP_168893082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256119-256766:1:exon

GJU04_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01195
old locus tag: GJU04_01190
so part of: sequence
location: complement(256788..256861)
location: region:256788-256861:-1
so has part: feature:256788-256861:-1:exon
subclass of: SO_0000663

position:256788:-1
position: 256788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256861:-1
position: 256861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256788-256861:-1:exon

GJU04_RS01195
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01195
old locus tag: GJU04_01190
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(256825..256827),aa:Pro,seq:tgg)
SIO_010081: GJU04_RS01195
subclass of: SO_0000673
so part of: GJU04_RS01195
location: complement(256788..256861)
location: region:256788-256861:-1
so has part: feature:256788-256861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256788-256861:-1:exon

GJU04_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01200
old locus tag: GJU04_01195
so part of: sequence
location: complement(256879..256951)
location: region:256879-256951:-1
so has part: feature:256879-256951:-1:exon
subclass of: SO_0000663

position:256879:-1
position: 256879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256951:-1
position: 256951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256879-256951:-1:exon

GJU04_RS01200
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01200
old locus tag: GJU04_01195
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(256916..256918),aa:His,seq:gtg)
SIO_010081: GJU04_RS01200
subclass of: SO_0000673
so part of: GJU04_RS01200
location: complement(256879..256951)
location: region:256879-256951:-1
so has part: feature:256879-256951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256879-256951:-1:exon

GJU04_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01205
old locus tag: GJU04_01200
so part of: sequence
location: complement(256995..257068)
location: region:256995-257068:-1
so has part: feature:256995-257068:-1:exon
subclass of: SO_0000663

position:256995:-1
position: 256995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257068:-1
position: 257068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256995-257068:-1:exon

GJU04_RS01205
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01205
old locus tag: GJU04_01200
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(257032..257034),aa:Arg,seq:ccg)
SIO_010081: GJU04_RS01205
subclass of: SO_0000673
so part of: GJU04_RS01205
location: complement(256995..257068)
location: region:256995-257068:-1
so has part: feature:256995-257068:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256995-257068:-1:exon

GJU04_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rho
locus tag: GJU04_RS01210
old locus tag: GJU04_01205
so part of: sequence
location: complement(257222..258481)
location: region:257222-258481:-1
so has part: feature:257222-258481:-1:exon
subclass of: SO_0000010

position:257222:-1
position: 257222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258481:-1
position: 258481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257222-258481:-1:exon

GJU04_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rho
locus tag: GJU04_RS01210
old locus tag: GJU04_01205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MNLTELKNKPISELIDLGENIYLENLARMRKQDIIFTILKQHSKSGEDIFGDGVLEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNQVNFDKPENARSKILFENLTPLHANSRLSMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLIVLLIDERPEEVTEMQRLVKGEVIASTFDEPPSRHVQVSEMVIEKAKRLVEHKKDVIILLDSMTRLARAYNTVAPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDDVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLSSQEELQRMWILRKIIHPMNEIDAMEFLINKLSMTKTNNDFFDMMKRS
SIO_010081: GJU04_RS01210
subclass of: SO_0000673
so part of: GJU04_RS01210
location: complement(257222..258481)
location: region:257222-258481:-1
so has part: feature:257222-258481:-1:exon

WP_168893083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257222-258481:-1:exon

GJU04_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: trxA
locus tag: GJU04_RS01215
old locus tag: GJU04_01210
so part of: sequence
location: complement(258622..258954)
location: region:258622-258954:-1
so has part: feature:258622-258954:-1:exon
subclass of: SO_0000010

position:258622:-1
position: 258622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258954:-1
position: 258954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258622-258954:-1:exon

GJU04_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: trxA
locus tag: GJU04_RS01215
old locus tag: GJU04_01210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091639.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin
translation: MQHKTNVLIHLNDKNFQSEIKKKKLVLVDFWAEWCNPCKIFSEVLEKVCYKYENIIFTKLNIEKYKNIAEQYNIRSIPTVLLFKNGEVIDKIIGSINLTQLENFLNKHLK
SIO_010081: GJU04_RS01215
subclass of: SO_0000673
so part of: GJU04_RS01215
location: complement(258622..258954)
location: region:258622-258954:-1
so has part: feature:258622-258954:-1:exon

WP_168893084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258622-258954:-1:exon

GJU04_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dksA
locus tag: GJU04_RS01220
old locus tag: GJU04_01215
so part of: sequence
location: 259281..259733
location: region:259281-259733:1
so has part: feature:259281-259733:1:exon
subclass of: SO_0000010

position:259281:1
position: 259281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259733:1
position: 259733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259281-259733:1:exon

GJU04_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dksA
locus tag: GJU04_RS01220
old locus tag: GJU04_01215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499356.1
GO function: GO:0019899 - enzyme binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase-binding protein DksA
translation: MKKSNNFLSSLNILSLAGVSPYQLKPNEKYMNKKQLSHFKKILESWKNKINDKFNNTVSYIKDETSNFPDPIDRASQEEEFSLELRNRDRERKLIKKIEITLKKFNTKNFGYCDCCEIEIGLKRLEAHPTANLCIDCKTLAEIRAKQIAE
SIO_010081: GJU04_RS01220
subclass of: SO_0000673
so part of: GJU04_RS01220
location: 259281..259733
location: region:259281-259733:1
so has part: feature:259281-259733:1:exon

WP_168893085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259281-259733:1:exon

GJU04_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01225
old locus tag: GJU04_01220
so part of: sequence
location: complement(260435..261052)
location: region:260435-261052:-1
so has part: feature:260435-261052:-1:exon
subclass of: SO_0000010

position:260435:-1
position: 260435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261052:-1
position: 261052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260435-261052:-1:exon

GJU04_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01225
old locus tag: GJU04_01220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053715.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO process: GO:0006801 - superoxide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-Mn family superoxide dismutase
translation: MSYKLPSLLYEYSDLEPFFDTKTMEIHHQKHHQNYINNTNLILNKNNIKDIKINKLIANLDKLSIPSSQKNFLRNNAGGHANHSFFWKILKKNTQPNNIILNILKKEFSNLENFKKRFEKKALNFFGSGWIWLVKKKNILKIITTINQDNPLMNNNDISIDIPIIGLDLWEHAYYLKYQNQKNLYLKAFWNVLNWDKITQLLLDK
SIO_010081: GJU04_RS01225
subclass of: SO_0000673
so part of: GJU04_RS01225
location: complement(260435..261052)
location: region:260435-261052:-1
so has part: feature:260435-261052:-1:exon

WP_168893086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260435-261052:-1:exon

GJU04_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: aroE
locus tag: GJU04_RS01230
old locus tag: GJU04_01225
so part of: sequence
location: complement(261082..261906)
location: region:261082-261906:-1
so has part: feature:261082-261906:-1:exon
subclass of: SO_0000010

position:261082:-1
position: 261082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261906:-1
position: 261906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261082-261906:-1:exon

GJU04_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: aroE
locus tag: GJU04_RS01230
old locus tag: GJU04_01225
EC number: 1.1.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003852337.1
GO function: GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0019632 - shikimate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate dehydrogenase
translation: MKIFAVFGNPIKHSKSPIIHQLFAKQTGVLQNYKKICVPINGFYKIFFSFFKNGGIGANITIPFKKKAYKLCDILTERAKYSGVINTVKIINSKTILGDNTDGIGLLKDLQNLKFINPKSNILLIGAGGAAQGIIYPLIKFGCNITIINRTYENTKKIIKFFKNVKKINSFKLEDLFLFHNKFKYHLIINATSSSMKGNIPNIPSSIINPDIFCYDLFYNFNKTPFLKWCLIHGAKKISDGIGMLIEQAAYSFYLWHGIMPNTKIIIKKYKKYI
SIO_010081: GJU04_RS01230
subclass of: SO_0000673
so part of: GJU04_RS01230
location: complement(261082..261906)
location: region:261082-261906:-1
so has part: feature:261082-261906:-1:exon

WP_168893087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261082-261906:-1:exon

GJU04_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01235
old locus tag: GJU04_01230
so part of: sequence
location: complement(261909..262469)
location: region:261909-262469:-1
so has part: feature:261909-262469:-1:exon
subclass of: SO_0000010

position:261909:-1
position: 261909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262469:-1
position: 262469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261909-262469:-1:exon

GJU04_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01235
old locus tag: GJU04_01230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012764074.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sua5/YciO/YrdC/YwlC family protein
translation: MNIKIFINALKMGKIIAYPTESVFGLGCDPDNEKAVNKLLKIKKRSIKKGLILIASQYNQLLKYINEKKILKNQKKKILSTWPGIITWIMPITTNTPYWLTGNFNSIAVRVTNHYLTSQLCNAFGKPIVSTSANITGKKPCLTYQDVLYHFYDIKEHILILNGKTGGYLKPSEIRDSFTNLVIRKG
SIO_010081: GJU04_RS01235
subclass of: SO_0000673
so part of: GJU04_RS01235
location: complement(261909..262469)
location: region:261909-262469:-1
so has part: feature:261909-262469:-1:exon

WP_168893088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261909-262469:-1:exon

GJU04_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: def
locus tag: GJU04_RS01240
old locus tag: GJU04_01235
so part of: sequence
location: 262590..263126
location: region:262590-263126:1
so has part: feature:262590-263126:1:exon
subclass of: SO_0000010

position:262590:1
position: 262590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263126:1
position: 263126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262590-263126:1:exon

GJU04_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: def
locus tag: GJU04_RS01240
old locus tag: GJU04_01235
EC number: 3.5.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014889048.1
GO function: GO:0042586 - peptide deformylase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide deformylase
translation: MSILKLLYFPNKKLRNIAESIKNINNDIKLLGNSMLKTMYYYNGIGLAATQIGINKRIIVIDITKKKNNPIILINPKIIEFNKSKIHSKEGCLSIPIKQKYFVLRSKTIKVQAKNLMNEIIEIEASNLLSFCIQHEIDHLNGILFIDYLSNLKYQRIYDKIIKINHKIMFLKKQNYIK
SIO_010081: GJU04_RS01240
subclass of: SO_0000673
so part of: GJU04_RS01240
location: 262590..263126
location: region:262590-263126:1
so has part: feature:262590-263126:1:exon

WP_168893089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262590-263126:1:exon

GJU04_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: fmt
locus tag: GJU04_RS01245
old locus tag: GJU04_01240
so part of: sequence
location: 263123..264097
location: region:263123-264097:1
so has part: feature:263123-264097:1:exon
subclass of: SO_0000010

position:263123:1
position: 263123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264097:1
position: 264097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263123-264097:1:exon

GJU04_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: fmt
locus tag: GJU04_RS01245
old locus tag: GJU04_01240
EC number: 2.1.2.9
inference: COORDINATES: protein motif:HMM:TIGR00460.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionyl-tRNA formyltransferase
translation: MKKKIKIIFIGTSKFAAYHLKGLINNIYTISCVITKPDTYANRGYKLTFNSVKKLAIKYKINILQPESLNSLKLIKNLINYDCDIIIVVDYGLLIPNKILDIPKLFCMNIHASLLPRWRGAAPIQRALLANDLKTGISIIKINNFLDEGDIIYQIEYNILLYDTYGSLYKKLAVLGLQGLLFILKKISKGEQIKFKSQNINMIKPTYAKKISKIECKLNWNLPAKKLECMVRAFNPKPGTFFMIKNQRFKVWQAEVINSFNSNYATKVPGTILLINRYGIQINTINGILNIQIIQPNGKKQMNIQNFLNLNQYKNLFKRDTIII
SIO_010081: GJU04_RS01245
subclass of: SO_0000673
so part of: GJU04_RS01245
location: 263123..264097
location: region:263123-264097:1
so has part: feature:263123-264097:1:exon

WP_168893090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263123-264097:1:exon

GJU04_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplQ
locus tag: GJU04_RS01250
old locus tag: GJU04_01245
so part of: sequence
location: complement(264090..264476)
location: region:264090-264476:-1
so has part: feature:264090-264476:-1:exon
subclass of: SO_0000010

position:264090:-1
position: 264090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264476:-1
position: 264476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264090-264476:-1:exon

GJU04_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplQ
locus tag: GJU04_RS01250
old locus tag: GJU04_01245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013745939.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MRHRKTGRYFNKNSSHRSAMLFNMVNSLINNEIIKTTLMKAKELRKIIEPMITIAKKNTISNKRLIRSKISNKINIIKLFNIIAPKFKNRLGGYTRIIKCGFRNGDKAPMAYIELIERKIILKNKNIK
SIO_010081: GJU04_RS01250
subclass of: SO_0000673
so part of: GJU04_RS01250
location: complement(264090..264476)
location: region:264090-264476:-1
so has part: feature:264090-264476:-1:exon

WP_168893091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264090-264476:-1:exon

GJU04_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpoA
locus tag: GJU04_RS01255
old locus tag: GJU04_01250
so part of: sequence
location: complement(264506..265522)
location: region:264506-265522:-1
so has part: feature:264506-265522:-1:exon
subclass of: SO_0000010

position:264506:-1
position: 264506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265522:-1
position: 265522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264506-265522:-1:exon

GJU04_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpoA
locus tag: GJU04_RS01255
old locus tag: GJU04_01250
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004709232.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MDQNSVTEFLKPKLVDIEHISNNTIKVTLEPLERGFGHTLGNSLRRILLSSIPGYAVTEVEIEGILHEYSTKEGIKEDIIEILLNLKELAIKIENNKKEVILILKKTGIGIVKASDIIHGNDIEIVNKEHIICHITNINTSIDMKIKIELGRGYVAAHTKINNNNFQKDHKIGRLLLDASYSPIKKIIYNVESARVDQRTDLDKLIIEMETNGTIDPEQAIRKAATILVEQLESFVNLKDIQQETEIKEEKPEFDPILLHSVDDLELTVRSANCLKTESIHLIGDLVQRTEVELLKTPNLGKKSLTEIKDILASRGLSLGMRLDNWPPIIKNNKQEQS
SIO_010081: GJU04_RS01255
subclass of: SO_0000673
so part of: GJU04_RS01255
location: complement(264506..265522)
location: region:264506-265522:-1
so has part: feature:264506-265522:-1:exon

WP_168893092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264506-265522:-1:exon

GJU04_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsD
locus tag: GJU04_RS01260
old locus tag: GJU04_01255
so part of: sequence
location: complement(265545..266165)
location: region:265545-266165:-1
so has part: feature:265545-266165:-1:exon
subclass of: SO_0000010

position:265545:-1
position: 265545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266165:-1
position: 266165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265545-266165:-1:exon

GJU04_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsD
locus tag: GJU04_RS01260
old locus tag: GJU04_01255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011520533.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MARYLGPKLKLSRREGTDLFLKSNVRAIDTKCKLEQAPGQHGIKKSRLSDYGIQLREKQKIRRLYGILERQFHNYYKKASHIKGNTGFNLLCLLEKRLDNIVYRMGFGVTRAEARQLISHKSIKVNNYIVNIASYQVSLNDKISVCEKSKKQLRINASIDLYSQREKPNWLEVNNKKMEGIFKRLPERSDLPADINEHLIIELYSK
SIO_010081: GJU04_RS01260
subclass of: SO_0000673
so part of: GJU04_RS01260
location: complement(265545..266165)
location: region:265545-266165:-1
so has part: feature:265545-266165:-1:exon

WP_168893093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265545-266165:-1:exon

GJU04_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsK
locus tag: GJU04_RS01265
old locus tag: GJU04_01260
so part of: sequence
location: complement(266208..266597)
location: region:266208-266597:-1
so has part: feature:266208-266597:-1:exon
subclass of: SO_0000010

position:266208:-1
position: 266208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266597:-1
position: 266597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266208-266597:-1:exon

GJU04_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsK
locus tag: GJU04_RS01265
old locus tag: GJU04_01260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053991.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MKKKSLNSKKKIKKQIIDGIAHIHASFNNTIVTITDRQGNSLGCATAGGSGFRGSRKSTPFAAQVAAEKCAEIVKHYGIKNLEIMVKGPGPGRESTIRALNNSGFKITNITDITPIPHNGCRPPKKRRV
SIO_010081: GJU04_RS01265
subclass of: SO_0000673
so part of: GJU04_RS01265
location: complement(266208..266597)
location: region:266208-266597:-1
so has part: feature:266208-266597:-1:exon

WP_168893094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266208-266597:-1:exon

GJU04_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsM
locus tag: GJU04_RS01270
old locus tag: GJU04_01265
so part of: sequence
location: complement(266618..266974)
location: region:266618-266974:-1
so has part: feature:266618-266974:-1:exon
subclass of: SO_0000010

position:266618:-1
position: 266618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266974:-1
position: 266974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266618-266974:-1:exon

GJU04_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsM
locus tag: GJU04_RS01270
old locus tag: GJU04_01265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018356918.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MVRIAGVNIPDNKRTIIALKYIYGIGKSHAARICKITNISQNIKINQLTEKKIDLLRNIILKFKVEGDLRRSINLHIKRLVDLNCYRGLRHKKGLPVRGQRTKTNAHTIKKLYKYFKK
SIO_010081: GJU04_RS01270
subclass of: SO_0000673
so part of: GJU04_RS01270
location: complement(266618..266974)
location: region:266618-266974:-1
so has part: feature:266618-266974:-1:exon

WP_168893095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266618-266974:-1:exon

GJU04_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmJ
locus tag: GJU04_RS01275
old locus tag: GJU04_01270
so part of: sequence
location: complement(267027..267143)
location: region:267027-267143:-1
so has part: feature:267027-267143:-1:exon
subclass of: SO_0000010

position:267027:-1
position: 267027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267143:-1
position: 267143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267027-267143:-1:exon

GJU04_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmJ
locus tag: GJU04_RS01275
old locus tag: GJU04_01270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRASIKKICRNCKIIRRNRVIYVVCKTDPKHKQRQG
SIO_010081: GJU04_RS01275
subclass of: SO_0000673
so part of: GJU04_RS01275
location: complement(267027..267143)
location: region:267027-267143:-1
so has part: feature:267027-267143:-1:exon

WP_168893096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267027-267143:-1:exon

GJU04_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: secY
locus tag: GJU04_RS01280
old locus tag: GJU04_01275
so part of: sequence
location: complement(267176..268504)
location: region:267176-268504:-1
so has part: feature:267176-268504:-1:exon
subclass of: SO_0000010

position:267176:-1
position: 267176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268504:-1
position: 268504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267176-268504:-1:exon

GJU04_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: secY
locus tag: GJU04_RS01280
old locus tag: GJU04_01275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016234953.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MIKSFKKLNFQSTKKGFIELKERFIFLIISIIIFRIGSFIPIPGINISILHSLIIKQHGTIIDMFNMFSGGALSRASIFALGVMPYISSSIIMQLLTVVHPYFIILKKEGEEGKKKINKYTKYTTLILAFIQAIGITTGLPKLPGMNNLVINPGINFFIISNLSLITGTIFLMWLGRQITKRGIGNGVSIIIVIGIITTLPLNIKQIMEQIRYGNLNFFVIFILLILLFLIILFIVFIEKGQRKINVQYARRYFGKQIYNTQQSTHLPLKINMSGVIPAIFSSSIILFISTMFSWFSNITNCNLIKNIAISLQPRQPIYIGLYILAIIFFCFFYTILVFNPQETADNLKKSGAYISGIRPGEQTAKYIKKIIMRLTLTGSLYITFICLIPEFLRNIINVPFYLSGTSLLIVIVVIIDFITQIQTLIMSTQYESILKKINLKG
SIO_010081: GJU04_RS01280
subclass of: SO_0000673
so part of: GJU04_RS01280
location: complement(267176..268504)
location: region:267176-268504:-1
so has part: feature:267176-268504:-1:exon

WP_168893097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267176-268504:-1:exon

GJU04_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplO
locus tag: GJU04_RS01285
old locus tag: GJU04_01280
so part of: sequence
location: complement(268512..268940)
location: region:268512-268940:-1
so has part: feature:268512-268940:-1:exon
subclass of: SO_0000010

position:268512:-1
position: 268512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268940:-1
position: 268940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268512-268940:-1:exon

GJU04_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplO
locus tag: GJU04_RS01285
old locus tag: GJU04_01280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091555.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MNLNSLFSKIKDNKKRLGRGIGSGKGKTSGRGHKGQKARSGYNINKIFEGGQSPLHRRLPKFGFKSKKNIFFKEIRLGDLEKIHSNYINLDILKSTKIISKKIKYVKIINKGGIKSPKKIIKLNCTKSVKIIIKKLGGIIEE
SIO_010081: GJU04_RS01285
subclass of: SO_0000673
so part of: GJU04_RS01285
location: complement(268512..268940)
location: region:268512-268940:-1
so has part: feature:268512-268940:-1:exon

WP_168893098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268512-268940:-1:exon

GJU04_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmD
locus tag: GJU04_RS01290
old locus tag: GJU04_01285
so part of: sequence
location: complement(268942..269121)
location: region:268942-269121:-1
so has part: feature:268942-269121:-1:exon
subclass of: SO_0000010

position:268942:-1
position: 268942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269121:-1
position: 269121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268942-269121:-1:exon

GJU04_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmD
locus tag: GJU04_RS01290
old locus tag: GJU04_01285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L30
translation: MLKNIKITQIKSSIGRLPKHRAILISLGLKHIGHTVIKKNTPSILGMIKKISYMLKVLY
SIO_010081: GJU04_RS01290
subclass of: SO_0000673
so part of: GJU04_RS01290
location: complement(268942..269121)
location: region:268942-269121:-1
so has part: feature:268942-269121:-1:exon

WP_168893099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268942-269121:-1:exon

GJU04_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsE
locus tag: GJU04_RS01295
old locus tag: GJU04_01290
so part of: sequence
location: complement(269105..269635)
location: region:269105-269635:-1
so has part: feature:269105-269635:-1:exon
subclass of: SO_0000010

position:269105:-1
position: 269105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269635:-1
position: 269635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269105-269635:-1:exon

GJU04_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsE
locus tag: GJU04_RS01295
old locus tag: GJU04_01290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000940350.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MNIYDNKNQHHELKEKLISVNRVSKTVKGGRIFSFTALTVVGNGKGRIGFGYGKAKEVPNAIQKAMEKARKKMINIILNNNTIQYPVKGHHTGSFVFIQPAYEGTGIIAGGAMRAVLEVVGIYNVLAKAYGSTNPINIVKATIKGLLNIHSLKMIAAKRNKTIEEIKRNMNSVKKY
SIO_010081: GJU04_RS01295
subclass of: SO_0000673
so part of: GJU04_RS01295
location: complement(269105..269635)
location: region:269105-269635:-1
so has part: feature:269105-269635:-1:exon

WP_168893100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269105-269635:-1:exon

GJU04_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplR
locus tag: GJU04_RS01300
old locus tag: GJU04_01295
so part of: sequence
location: complement(269658..270011)
location: region:269658-270011:-1
so has part: feature:269658-270011:-1:exon
subclass of: SO_0000010

position:269658:-1
position: 269658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270011:-1
position: 270011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269658-270011:-1:exon

GJU04_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplR
locus tag: GJU04_RS01300
old locus tag: GJU04_01295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011282755.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MNIKKIARIRRATKLRKNLQKLKMIRLSIHRTSRHIYAQIISVNNKILITASTLEKKIKKKLIYTGNIKSAIFIGEKIATRAIKHGILNLSFDRSGFKYHGRIKALANAARQTGLKF
SIO_010081: GJU04_RS01300
subclass of: SO_0000673
so part of: GJU04_RS01300
location: complement(269658..270011)
location: region:269658-270011:-1
so has part: feature:269658-270011:-1:exon

WP_168893101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269658-270011:-1:exon

GJU04_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplF
locus tag: GJU04_RS01305
old locus tag: GJU04_01300
so part of: sequence
location: complement(270038..270571)
location: region:270038-270571:-1
so has part: feature:270038-270571:-1:exon
subclass of: SO_0000010

position:270038:-1
position: 270038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270571:-1
position: 270571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270038-270571:-1:exon

GJU04_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplF
locus tag: GJU04_RS01305
old locus tag: GJU04_01300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MSRIAKKLIIIPNNIKITINGQHINIQGNNGILENTFHKTIKIILNKNKLLFKPKKKCKKGWAQAGTASSLMNSMIIGVTIGFSKKLILFGVGYKFSIKNNILNLILGFSHPINFTLPKGIIGKCLNQNEILLTGADKQLLGQVAANIRSYRTPEPYKGKGIRYNNEIIKIKETKKK
SIO_010081: GJU04_RS01305
subclass of: SO_0000673
so part of: GJU04_RS01305
location: complement(270038..270571)
location: region:270038-270571:-1
so has part: feature:270038-270571:-1:exon

WP_168893102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270038-270571:-1:exon

GJU04_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsH
locus tag: GJU04_RS01310
old locus tag: GJU04_01305
so part of: sequence
location: complement(270588..270980)
location: region:270588-270980:-1
so has part: feature:270588-270980:-1:exon
subclass of: SO_0000010

position:270588:-1
position: 270588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270980:-1
position: 270980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270588-270980:-1:exon

GJU04_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsH
locus tag: GJU04_RS01310
old locus tag: GJU04_01305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874461.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MSIQNPIADMLTRIRNGQLSNKSKIVMQYSKLKKSITQILKNEGYIKNFNIIKEKNFLLEITLKYFKGKGVIEKIHCISRPGLRIYKKKKFLPKVMAGLGIAIISTSKGIMTDYTARYHGIGGEIICYVS
SIO_010081: GJU04_RS01310
subclass of: SO_0000673
so part of: GJU04_RS01310
location: complement(270588..270980)
location: region:270588-270980:-1
so has part: feature:270588-270980:-1:exon

WP_168893103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270588-270980:-1:exon

GJU04_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsN
locus tag: GJU04_RS01315
old locus tag: GJU04_01310
so part of: sequence
location: complement(271014..271319)
location: region:271014-271319:-1
so has part: feature:271014-271319:-1:exon
subclass of: SO_0000010

position:271014:-1
position: 271014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271319:-1
position: 271319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271014-271319:-1:exon

GJU04_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsN
locus tag: GJU04_RS01315
old locus tag: GJU04_01310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002438702.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S14
translation: MAKESIKARELKRINLGKKFFLKRKKLKKIISSINTNDKDRWDAIFKLQSLPRDSSLSRQRNRCKITGRPHAFLRKFGLSRIKLREAAMKGDIPGLKKSSW
SIO_010081: GJU04_RS01315
subclass of: SO_0000673
so part of: GJU04_RS01315
location: complement(271014..271319)
location: region:271014-271319:-1
so has part: feature:271014-271319:-1:exon

WP_168893104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271014-271319:-1:exon

GJU04_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplE
locus tag: GJU04_RS01320
old locus tag: GJU04_01315
so part of: sequence
location: complement(271334..271873)
location: region:271334-271873:-1
so has part: feature:271334-271873:-1:exon
subclass of: SO_0000010

position:271334:-1
position: 271334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271873:-1
position: 271873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271334-271873:-1:exon

GJU04_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplE
locus tag: GJU04_RS01320
old locus tag: GJU04_01315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091562.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MSKLYNYYKHKVIKKLMLKFQYKSIMQVPCIKKITLNMGVGKVISDKKYLDNAINDLTIISGQKPLTTKSHKSIAAFKIRKGYPIGCKVTLRKKRMWNFFERLLWVVIPRMRDFRGLSKKSFDHNGNYSIGIKEQIIFPEINFDKIDHIRGLNITITTNNISIKESYSLFKEFKFPFRS
SIO_010081: GJU04_RS01320
subclass of: SO_0000673
so part of: GJU04_RS01320
location: complement(271334..271873)
location: region:271334-271873:-1
so has part: feature:271334-271873:-1:exon

WP_168893105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271334-271873:-1:exon

GJU04_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplX
locus tag: GJU04_RS01325
old locus tag: GJU04_01320
so part of: sequence
location: complement(271891..272205)
location: region:271891-272205:-1
so has part: feature:271891-272205:-1:exon
subclass of: SO_0000010

position:271891:-1
position: 271891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272205:-1
position: 272205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271891-272205:-1:exon

GJU04_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplX
locus tag: GJU04_RS01325
old locus tag: GJU04_01320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MIHKLRCNDEVIILTGKDKGKKGKIKYFIKKKLVIIKGINIVKKHSKPNPTVSHTGGILEKEAGIHISNVALFNKDTGKADRVKIKNNKGIKKRFFKSNDKNIK
SIO_010081: GJU04_RS01325
subclass of: SO_0000673
so part of: GJU04_RS01325
location: complement(271891..272205)
location: region:271891-272205:-1
so has part: feature:271891-272205:-1:exon

WP_168893106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271891-272205:-1:exon

GJU04_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplN
locus tag: GJU04_RS01330
old locus tag: GJU04_01325
so part of: sequence
location: complement(272228..272599)
location: region:272228-272599:-1
so has part: feature:272228-272599:-1:exon
subclass of: SO_0000010

position:272228:-1
position: 272228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272599:-1
position: 272599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272228-272599:-1:exon

GJU04_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplN
locus tag: GJU04_RS01330
old locus tag: GJU04_01325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005501250.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQEHTMLNIADNSGARSVMCIKVLGGSRRRYANIGDIIKVTVKDAIPRGKVKKGDVLKAVIVRTKKGIRRSDGSIIRFDHNSCVLLNDSNEQLIGTRIFGPITRELRHEKFMKIISLAPEVI
SIO_010081: GJU04_RS01330
subclass of: SO_0000673
so part of: GJU04_RS01330
location: complement(272228..272599)
location: region:272228-272599:-1
so has part: feature:272228-272599:-1:exon

WP_168893107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272228-272599:-1:exon

GJU04_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsQ
locus tag: GJU04_RS01335
old locus tag: GJU04_01330
so part of: sequence
location: complement(272673..272927)
location: region:272673-272927:-1
so has part: feature:272673-272927:-1:exon
subclass of: SO_0000010

position:272673:-1
position: 272673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272927:-1
position: 272927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272673-272927:-1:exon

GJU04_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsQ
locus tag: GJU04_RS01335
old locus tag: GJU04_01330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MQKKIKILKGKVISNKMQKSIIVNINRLIKHPIYGKYVNRTTKLHVHDEKNICNIGDFVEIKECRPLSKTKSWILVNIIKKSII
SIO_010081: GJU04_RS01335
subclass of: SO_0000673
so part of: GJU04_RS01335
location: complement(272673..272927)
location: region:272673-272927:-1
so has part: feature:272673-272927:-1:exon

WP_168893108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272673-272927:-1:exon

GJU04_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmC
locus tag: GJU04_RS01340
old locus tag: GJU04_01335
so part of: sequence
location: complement(272912..273127)
location: region:272912-273127:-1
so has part: feature:272912-273127:-1:exon
subclass of: SO_0000010

position:272912:-1
position: 272912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273127:-1
position: 273127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272912-273127:-1:exon

GJU04_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmC
locus tag: GJU04_RS01340
old locus tag: GJU04_01335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499647.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MKIHDIIKKNNKDLHNELLSLSREQFNLKIQLTSGNLKQTHLLKKSRRNIAKIKTILSQRKRKIIKLCKKK
SIO_010081: GJU04_RS01340
subclass of: SO_0000673
so part of: GJU04_RS01340
location: complement(272912..273127)
location: region:272912-273127:-1
so has part: feature:272912-273127:-1:exon

WP_168893109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272912-273127:-1:exon

GJU04_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplP
locus tag: GJU04_RS01345
old locus tag: GJU04_01340
so part of: sequence
location: complement(273140..273541)
location: region:273140-273541:-1
so has part: feature:273140-273541:-1:exon
subclass of: SO_0000010

position:273140:-1
position: 273140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273541:-1
position: 273541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273140-273541:-1:exon

GJU04_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplP
locus tag: GJU04_RS01345
old locus tag: GJU04_01340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013878047.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLQPKRTKFKKMHKGRNRGIIVGMNINFGIYAIKAINRGRITSKQIESARRAISHSMKRQGKIWIRIFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGRILYEIDGVSEIIARKALKLGAAKLPIKTIFLIK
SIO_010081: GJU04_RS01345
subclass of: SO_0000673
so part of: GJU04_RS01345
location: complement(273140..273541)
location: region:273140-273541:-1
so has part: feature:273140-273541:-1:exon

WP_168893110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273140-273541:-1:exon

GJU04_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsC
locus tag: GJU04_RS01350
old locus tag: GJU04_01345
so part of: sequence
location: complement(273559..274275)
location: region:273559-274275:-1
so has part: feature:273559-274275:-1:exon
subclass of: SO_0000010

position:273559:-1
position: 273559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274275:-1
position: 274275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273559-274275:-1:exon

GJU04_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsC
locus tag: GJU04_RS01350
old locus tag: GJU04_01345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKTHPNGLRLGITKIWNSIWFANTKNYANYLYSDLQVRKFLNKKLIKASVSKITIERPSKSIRVNIHTARPGIVIGKKGEDVEKLRKIISKITGVPAQVNITEVRKPELEAKLVADIIASQLEKRIMFRRAMKRAVQNAMRLGAKGVKVEVSGRLGGAEIARKEWYREGRVPLHTLRADIDFSLSEANTTYGIIGVKVWIFKGEILKNNFKKKLIFTKPITHHPQSYRLQRNKGRK
SIO_010081: GJU04_RS01350
subclass of: SO_0000673
so part of: GJU04_RS01350
location: complement(273559..274275)
location: region:273559-274275:-1
so has part: feature:273559-274275:-1:exon

WP_168893111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273559-274275:-1:exon

GJU04_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplV
locus tag: GJU04_RS01355
old locus tag: GJU04_01350
so part of: sequence
location: complement(274275..274625)
location: region:274275-274625:-1
so has part: feature:274275-274625:-1:exon
subclass of: SO_0000010

position:274625:-1
position: 274625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274275-274625:-1:exon

GJU04_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplV
locus tag: GJU04_RS01355
old locus tag: GJU04_01350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975770.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MEIIAKHKYAPSSAQKLRLVANIIRGNKISKALDILNFSNKKSAFLIKKVLNSAIANAEHNYGLDIDSLFVFKIFIDLGTNIKRIMPRAKGRSDRILKYTSHITIILSDNIIGEKN
SIO_010081: GJU04_RS01355
subclass of: SO_0000673
so part of: GJU04_RS01355
location: complement(274275..274625)
location: region:274275-274625:-1
so has part: feature:274275-274625:-1:exon

WP_168893112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274275-274625:-1:exon

GJU04_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsS
locus tag: GJU04_RS01360
old locus tag: GJU04_01355
so part of: sequence
location: complement(274668..274955)
location: region:274668-274955:-1
so has part: feature:274668-274955:-1:exon
subclass of: SO_0000010

position:274668:-1
position: 274668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274955:-1
position: 274955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274668-274955:-1:exon

GJU04_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsS
locus tag: GJU04_RS01360
old locus tag: GJU04_01355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672710.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MPRSLKKGPFIDQHLLKKVEKSIKNKDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHIPIYILDEMVGHKLGEFAPTRTYRGHTADKKIKKTLKK
SIO_010081: GJU04_RS01360
subclass of: SO_0000673
so part of: GJU04_RS01360
location: complement(274668..274955)
location: region:274668-274955:-1
so has part: feature:274668-274955:-1:exon

WP_168893113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274668-274955:-1:exon

GJU04_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplB
locus tag: GJU04_RS01365
old locus tag: GJU04_01360
so part of: sequence
location: complement(274979..275800)
location: region:274979-275800:-1
so has part: feature:274979-275800:-1:exon
subclass of: SO_0000010

position:274979:-1
position: 274979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275800:-1
position: 275800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274979-275800:-1:exon

GJU04_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplB
locus tag: GJU04_RS01365
old locus tag: GJU04_01360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MTIKKYKPTSPGRRHMIKVINHSLYKGKPLPSKIEKKNKSGGRNNNGRITTRHIGGGHKKLYRIIDFKRNKDNIPAIVERIEYDPNRSANIALVKYKDGVKKYILSPKNLKIGDIVESGKNVNIKIGNTLPLSNIPVGTILHNVEMKPGKGGQIARAAGTYVQLIAKEGSYITLRLKSGEIRKILSNCKATLGEIGNNEHMLKSFGKAGAKRWKGIRPTVRGTAMNPIDHPHGGGEGKNFGKHPVTPWGVQTKGKKTRKNKRTEKYIIKHRNK
SIO_010081: GJU04_RS01365
subclass of: SO_0000673
so part of: GJU04_RS01365
location: complement(274979..275800)
location: region:274979-275800:-1
so has part: feature:274979-275800:-1:exon

WP_168893114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274979-275800:-1:exon

GJU04_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplW
locus tag: GJU04_RS01370
old locus tag: GJU04_01365
so part of: sequence
location: complement(275819..276124)
location: region:275819-276124:-1
so has part: feature:275819-276124:-1:exon
subclass of: SO_0000010

position:275819:-1
position: 275819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276124:-1
position: 276124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275819-276124:-1:exon

GJU04_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplW
locus tag: GJU04_RS01370
old locus tag: GJU04_01365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070349.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MIFKEYDFQIIKGPHISEKSSFVAEKTNTLIIKVLKKATKIDIKKAIKKIFNIKVKSVNTLIVKGKKKKNKKYNYQRNNWKKAYIILDKNQKIDFNVNKNL
SIO_010081: GJU04_RS01370
subclass of: SO_0000673
so part of: GJU04_RS01370
location: complement(275819..276124)
location: region:275819-276124:-1
so has part: feature:275819-276124:-1:exon

WP_168893115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275819-276124:-1:exon

GJU04_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplD
locus tag: GJU04_RS01375
old locus tag: GJU04_01370
so part of: sequence
location: complement(276121..276726)
location: region:276121-276726:-1
so has part: feature:276121-276726:-1:exon
subclass of: SO_0000010

position:276121:-1
position: 276121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276726:-1
position: 276726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276121-276726:-1:exon

GJU04_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplD
locus tag: GJU04_RS01375
old locus tag: GJU04_01370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MEIITEDTKDIVIVSDIIFNRNYNKSLIHQLIESYRTIGRQGTKAQKTRGEVKGSGKKPWKQKGTGKARAGSFKSPIWRSGGITFAAKNKIYNKKINKKMFRNALKSIFSKLIKEKRLILVKEFTISKPKTKILIEKLKKYLSTKIMIITTFIDQNLFLASRNLYNVKIKNSININPIYLINANKTIITVNAIKHIEEILK
SIO_010081: GJU04_RS01375
subclass of: SO_0000673
so part of: GJU04_RS01375
location: complement(276121..276726)
location: region:276121-276726:-1
so has part: feature:276121-276726:-1:exon

WP_168893116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276121-276726:-1:exon

GJU04_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplC
locus tag: GJU04_RS01380
old locus tag: GJU04_01375
so part of: sequence
location: complement(276758..277399)
location: region:276758-277399:-1
so has part: feature:276758-277399:-1:exon
subclass of: SO_0000010

position:276758:-1
position: 276758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277399:-1
position: 277399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276758-277399:-1:exon

GJU04_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplC
locus tag: GJU04_RS01380
old locus tag: GJU04_01375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MIGLIGKKMGMTRFFTEEGLSIPITVIHFETIRITQIKTILNDGYNAIQMTTGFKKTSRMNKAEIGHFAKAKTKAGYILWEYRFKQHNPKKFYVGQKIDINIFKQIIKVDITGISKGKGFSGTVKRWNFKTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNKKITIQNLDIIKLDTIKNLLLIKGAVPGYTGSNVIVKPAIKNLI
SIO_010081: GJU04_RS01380
subclass of: SO_0000673
so part of: GJU04_RS01380
location: complement(276758..277399)
location: region:276758-277399:-1
so has part: feature:276758-277399:-1:exon

WP_168893117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276758-277399:-1:exon

GJU04_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsJ
locus tag: GJU04_RS01385
old locus tag: GJU04_01380
so part of: sequence
location: complement(277448..277762)
location: region:277448-277762:-1
so has part: feature:277448-277762:-1:exon
subclass of: SO_0000010

position:277448:-1
position: 277448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277762:-1
position: 277762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277448-277762:-1:exon

GJU04_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsJ
locus tag: GJU04_RS01385
old locus tag: GJU04_01380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091575.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MQKNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPTRKEKFTILISPHVDKDARDQYEIRTHKRLVDIIEPTEKTVDALMRLDLAAGVDVQISLG
SIO_010081: GJU04_RS01385
subclass of: SO_0000673
so part of: GJU04_RS01385
location: complement(277448..277762)
location: region:277448-277762:-1
so has part: feature:277448-277762:-1:exon

WP_168893118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277448-277762:-1:exon

GJU04_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ruvX
locus tag: GJU04_RS01390
old locus tag: GJU04_01385
so part of: sequence
location: 277962..278402
location: region:277962-278402:1
so has part: feature:277962-278402:1:exon
subclass of: SO_0000010

position:277962:1
position: 277962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278402:1
position: 278402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277962-278402:1:exon

GJU04_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ruvX
locus tag: GJU04_RS01390
old locus tag: GJU04_01385
EC number: 3.1.21.10
inference: COORDINATES: protein motif:HMM:NF015607.2
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction resolvase RuvX
translation: MNKKHNNITLLAFDYGIKNIGVAVGHSLIRIAHKLQVIKNKKIGNINWIKFDYLINQWKPKKIIVGLPLKMDGSQQYITILAKNFAFNIKKKFNIEIIFHDERLSTVEAKYILFSKGGWKKLQKSDINSLSACIILQSWFDNNQLK
SIO_010081: GJU04_RS01390
subclass of: SO_0000673
so part of: GJU04_RS01390
location: 277962..278402
location: region:277962-278402:1
so has part: feature:277962-278402:1:exon

WP_168893119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277962-278402:1:exon

GJU04_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01395
old locus tag: GJU04_01390
so part of: sequence
location: 278440..279000
location: region:278440-279000:1
so has part: feature:278440-279000:1:exon
subclass of: SO_0000010

position:278440:1
position: 278440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279000:1
position: 279000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278440-279000:1:exon

GJU04_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01395
old locus tag: GJU04_01390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITIICLYKHLTEIIISIFLLRLWIYYSINNYYNFFVKYIILLTNFILKYLKKFFFQKNKDEFLSFMIIILLIFLKYPILILIQDKNLFFYNLNTYLFVSILTLLKFLGYLFFWLITIYLISNIFNIRHNDFNDLLEIFINQIYNIKKNYFLNIYNINIILLITNIILYFLNNLLMDLFPQFWFLI
SIO_010081: GJU04_RS01395
subclass of: SO_0000673
so part of: GJU04_RS01395
location: 278440..279000
location: region:278440-279000:1
so has part: feature:278440-279000:1:exon

WP_168893120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278440-279000:1:exon

GJU04_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: hemW
locus tag: GJU04_RS01400
old locus tag: GJU04_01395
so part of: sequence
location: 279011..280159
location: region:279011-280159:1
so has part: feature:279011-280159:1:exon
subclass of: SO_0000010

position:279011:1
position: 279011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280159:1
position: 280159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279011-280159:1:exon

GJU04_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: hemW
locus tag: GJU04_RS01400
old locus tag: GJU04_01395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499680.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM family heme chaperone HemW
translation: MINFNKYYSLYIHIPWCLKKCPYCDFYSTIFIKKNTKIQEQYINSLLLDLEKTLFFIKKKIYIKSIFLGGGTPSLLNEKLILLLLNKIKKKIHVLKSVEITIEINPSSISEKKIQSYINSGINRFSIGIQSFNNQSLKILGRLHNNEDAINAINILIKNNISNFNLDIIYGIPGQSLKNSYDDLYQAISFNPSHISWYQLTFEKNTIFDKFKPKNILNDDLLWKMFLQGKKTLFKHKYLQYEISSFVKKKKFICKHNLNYWYFGNYLGIGCNSHSKITLLDNKIIRIIKNKNIRQYINGDFFYSIKTITHKEIIFEFFLNRLRLYKKISKKEFIKITGINTISIIFLIKKALKLDYLKENNDYWFITNKGHLYLNNLLEIFI
SIO_010081: GJU04_RS01400
subclass of: SO_0000673
so part of: GJU04_RS01400
location: 279011..280159
location: region:279011-280159:1
so has part: feature:279011-280159:1:exon

WP_168893121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279011-280159:1:exon

GJU04_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: trmB
locus tag: GJU04_RS01405
old locus tag: GJU04_01400
so part of: sequence
location: complement(280152..280853)
location: region:280152-280853:-1
so has part: feature:280152-280853:-1:exon
subclass of: SO_0000010

position:280152:-1
position: 280152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280853:-1
position: 280853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280152-280853:-1:exon

GJU04_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: trmB
locus tag: GJU04_RS01405
old locus tag: GJU04_01400
EC number: 2.1.1.33
inference: COORDINATES: protein motif:HMM:TIGR00091.1
GO function: GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(46)-N7)-methyltransferase TrmB
translation: MNNIKSFVCRYRKLKKSKQIIFNKYFHLFNISYKKKKLNFINIFNNKLPIIIDIGFGIDNNIINFARHHIHYNFIGIEVYLPGIINCIQKIKKNKIKNLKLIYYDAFFVFKNMIPDDSIKLIQLYFPDPWPKIKHKKRRLLKIDFLKIIFLKLKNNGLLYIITDCLDYRDDINSNIKNINFNNKKFIILKSNQHKNIYKNLNFFLLKTKFFNKAKKKKRNIYYLEYKKILFLK
SIO_010081: GJU04_RS01405
subclass of: SO_0000673
so part of: GJU04_RS01405
location: complement(280152..280853)
location: region:280152-280853:-1
so has part: feature:280152-280853:-1:exon

WP_168893122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280152-280853:-1:exon

GJU04_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01410
old locus tag: GJU04_01405
so part of: sequence
location: 280935..281177
location: region:280935-281177:1
so has part: feature:280935-281177:1:exon
subclass of: SO_0000010

position:280935:1
position: 280935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281177:1
position: 281177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280935-281177:1:exon

GJU04_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01410
old locus tag: GJU04_01405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353879.1
GO function: GO:0005506 - iron ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxidative damage protection protein
translation: MSKKIFCVYFQCKMKKLNYKVYPGNIGKIIYNHISKNAWSKWLLYQTKLINEKKLNMTKEKDISFLEKEMINFLFKNNKT
SIO_010081: GJU04_RS01410
subclass of: SO_0000673
so part of: GJU04_RS01410
location: 280935..281177
location: region:280935-281177:1
so has part: feature:280935-281177:1:exon

WP_168893123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280935-281177:1:exon

GJU04_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01415
old locus tag: GJU04_01410
so part of: sequence
location: complement(281193..281266)
location: region:281193-281266:-1
so has part: feature:281193-281266:-1:exon
subclass of: SO_0000663

position:281193:-1
position: 281193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281266:-1
position: 281266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281193-281266:-1:exon

GJU04_RS01415
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01415
old locus tag: GJU04_01410
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(281230..281232),aa:Ala,seq:tgc)
SIO_010081: GJU04_RS01415
subclass of: SO_0000673
so part of: GJU04_RS01415
location: complement(281193..281266)
location: region:281193-281266:-1
so has part: feature:281193-281266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281193-281266:-1:exon

GJU04_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01420
old locus tag: GJU04_01415
so part of: sequence
location: complement(281276..281349)
location: region:281276-281349:-1
so has part: feature:281276-281349:-1:exon
subclass of: SO_0000663

position:281276:-1
position: 281276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281349:-1
position: 281349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281276-281349:-1:exon

GJU04_RS01420
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01420
old locus tag: GJU04_01415
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(281313..281315),aa:Ile,seq:gat)
SIO_010081: GJU04_RS01420
subclass of: SO_0000673
so part of: GJU04_RS01420
location: complement(281276..281349)
location: region:281276-281349:-1
so has part: feature:281276-281349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281276-281349:-1:exon

GJU04_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rmuC
locus tag: GJU04_RS01425
old locus tag: GJU04_01420
so part of: sequence
location: 281490..282833
location: region:281490-282833:1
so has part: feature:281490-282833:1:exon
subclass of: SO_0000010

position:281490:1
position: 281490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282833:1
position: 282833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281490-282833:1:exon

GJU04_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rmuC
locus tag: GJU04_RS01425
old locus tag: GJU04_01420
inference: COORDINATES: protein motif:HMM:NF014680.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA recombination protein RmuC
translation: MFFYKNFIYFFIHFLLITIIFFYLKKKKQISKNYLIKKIKENKKLEIELIKKTEKIEFLQKIKIENKSLNNLISNQIEIILNLKIKVKELQTKLDDTIFFFNKKEKLIINNNHYLNIELQNLANKILKKSEKRIDEYSTKNIKNIIYPLNIKLESLTDQLQKNLNQESLERNILTNEIKNLKKLNIHISQEAINLTNALKGNNKIQGIWGELVLNKILESSGLRNGYEYETQKKIKLENKEIIQPDVIINLPYNKKVIIDSKMTLIAYERYFNTNDKNKQKKALNEHILAIRNHLHLLSNKKYQCLLKLKLLDYIIMFIPIESAFSLAINYKPNLLYEALKLNIMLVSPTTLMISLRTIENLWRFDKQNKNSLVIASKATKLYDKIRLFVDDILILERSINKLQINYNLATKKLFKGKGNIVSKAENFRNLGIKVINKINKNFIEKK
SIO_010081: GJU04_RS01425
subclass of: SO_0000673
so part of: GJU04_RS01425
location: 281490..282833
location: region:281490-282833:1
so has part: feature:281490-282833:1:exon

WP_168893124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281490-282833:1:exon

GJU04_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01430
old locus tag: GJU04_01425
so part of: sequence
location: 282868..283668
location: region:282868-283668:1
so has part: feature:282868-283668:1:exon
subclass of: SO_0000010

position:282868:1
position: 282868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283668:1
position: 283668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282868-283668:1:exon

GJU04_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01430
old locus tag: GJU04_01425
inference: COORDINATES: protein motif:HMM:NF013213.2
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TatD family hydrolase
translation: MFDISVNLTNKQFEKDIDGIINRAIQNKVNGMLIIGCDLKDSLNAYNITKKYQNYCWSTVGIHPHYANLWENNIINKIEKFLKYKNIVAIGECGLDFYRNYSSKKEQLLTFNTQLELAASYAMPIYLHCRNAFNLFFHVLKFWIHKISKIIIHCFSGNKYELEKCLDMNMSIGLSESFFNKKYRIGSIKDVKLIPKEKLLIGTDSPFLLFKSMYDKIYKKLKGRNEPSLLPNLLKKIVFLRKEKYSILDIQTEKNAFNILNLSTNN
SIO_010081: GJU04_RS01430
subclass of: SO_0000673
so part of: GJU04_RS01430
location: 282868..283668
location: region:282868-283668:1
so has part: feature:282868-283668:1:exon

WP_168893125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282868-283668:1:exon

GJU04_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: asnS
locus tag: GJU04_RS01435
old locus tag: GJU04_01430
so part of: sequence
location: 283757..285157
location: region:283757-285157:1
so has part: feature:283757-285157:1:exon
subclass of: SO_0000010

position:283757:1
position: 283757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285157:1
position: 285157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283757-285157:1:exon

GJU04_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: asnS
locus tag: GJU04_RS01435
old locus tag: GJU04_01430
EC number: 6.1.1.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874316.1
GO function: GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine--tRNA ligase
translation: MYLISSISQLITGKIKINSKIFIGGWVRNRRHSKLGISFINLYDGSCIHDIQIIANNKLKNYEKEILNITSGCSLKVKGILKYSPKNLQKYEVHALQIEILGWVHNPGKYPISPKKHSLKYLREVSHLRSRTKIISCITRIKHSIALYIHNFLNKENFFWVNTPLITTLDTEGSGKMFRVSTLDLSNIKYRKNKNIFKKDFFGKEAFLTVSGQLNLETYACSMSKVYTFGPTFRAENSNTKRHLAEFWMLEIEIAFSNLEYIINFIEKMLKNIFKYFLTFHENEISFLSQRDNNNLFNKINKILLNKFNVIEYNEAINILTNCKKNFSHLITWGEDLLIEHEKYLTNKYFNNIVIIYNYPKNIKAFYMYLNNDKKTVASIDVLFPDIGEIIGGSQRESRIDILDQRLKELKLNKNNYWWYRDLRKYGTIPHSGFGLGFERLISYITGIYNVKDIIPFPRTPYNARF
SIO_010081: GJU04_RS01435
subclass of: SO_0000673
so part of: GJU04_RS01435
location: 283757..285157
location: region:283757-285157:1
so has part: feature:283757-285157:1:exon

WP_168893126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283757-285157:1:exon

GJU04_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01440
old locus tag: GJU04_01435
so part of: sequence
location: 285247..286455
location: region:285247-286455:1
so has part: feature:285247-286455:1:exon
subclass of: SO_0000010

position:285247:1
position: 285247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286455:1
position: 286455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285247-286455:1:exon

GJU04_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01440
old locus tag: GJU04_01435
inference: COORDINATES: protein motif:HMM:NF012489.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porin
translation: MKYNILKFLITFLLTISSITTVSASEIYNKNGQKIDLYGFLDIKKAYSNKDPEDIPKKYENTISNMIFGFKSNTNIFNNISGYSQFEYSLPINQSEIDKSVFPSIRLGFIGLNFNNGSSSIDFGRNYGILYDTTSLIKKKSFFIDDLMYNYNDKFMFGRTNNLITYRNKNFFGLIKGLDIALQYKSPHFYTENDVFYNGSNNKDHDIFIEKEKNKKGWGASIKYKIGNSGVSITGSYFNSSKIIDKNDELKKIFFIKNHNDKNNDINAFSIGAKYEKNNIYLATVFSKTKNSLTYLDRNNFYFANKIKNLEIIGQYKFNNNLKATISYVQSEGNNIPAGYHYASGNISFLKYVTINTIYKFNKNLSAYLDYRINLLNKNDRYIKSNHIFTDNLFGIGIVYNF
SIO_010081: GJU04_RS01440
subclass of: SO_0000673
so part of: GJU04_RS01440
location: 285247..286455
location: region:285247-286455:1
so has part: feature:285247-286455:1:exon

WP_168893127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285247-286455:1:exon

GJU04_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01445
old locus tag: GJU04_01440
so part of: sequence
location: complement(286527..287174)
location: region:286527-287174:-1
so has part: feature:286527-287174:-1:exon
subclass of: SO_0000010

position:286527:-1
position: 286527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287174:-1
position: 287174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286527-287174:-1:exon

GJU04_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01445
old locus tag: GJU04_01440
inference: COORDINATES: protein motif:HMM:NF012955.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MNYIVIPVTKLNQNCYVIWCKKTLNAALIDPGGEYLKILKILNKYKLNIVKILITHCHLDHIGAAYILSKILNVPILGPHKKDIFWIKNIKLQSTLFQIPRCIFKKNIWLKNNQNIYIGKIILKTYHCPGHTPGHVIFFNKLNSILISGDIIFRNSIGRTDLPKSNFNILMNSIKKKIILLGMNTSVLPGHGKKTNIYYELMNNPWLINYKTNYF
SIO_010081: GJU04_RS01445
subclass of: SO_0000673
so part of: GJU04_RS01445
location: complement(286527..287174)
location: region:286527-287174:-1
so has part: feature:286527-287174:-1:exon

WP_281351265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286527-287174:-1:exon

GJU04_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsA
locus tag: GJU04_RS01450
old locus tag: GJU04_01445
so part of: sequence
location: complement(287190..288848)
location: region:287190-288848:-1
so has part: feature:287190-288848:-1:exon
subclass of: SO_0000010

position:287190:-1
position: 287190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288848:-1
position: 288848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287190-288848:-1:exon

GJU04_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsA
locus tag: GJU04_RS01450
old locus tag: GJU04_01445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499461.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S1
translation: MNECFEELFEKSLKNKIINLGSIISGTIISIEKDIVLVDAGLKSESCIPIAQFQNSQGELEIKIGDIVDVSLDSIEDGFGETILSREKAKRHESWLVLEKANIDNNNIKGIITGKVKGGFTVEINSIRAFLPGSLVDIRPIRDTSHLEGKELDFKVIKLDQKRNNVVVSRKAVIELENSAERNYLLNTIYEGMEIKGLVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNIGEEIKIKILKFDKDKTRVSLGLKQLGEDPWKSISKRYPENSKLLGRVTNLTDYGCFVEIEEGVEGLVHISEMDWTNKNIHPTKIVNVNDKVKVMVLDIDEERRRISLGIKQCTINPWLEFSKNYKKGDHVKGKIKSITDFGIFIGLNGGIDGLVHLSDLSWINNGEDEVHKYKKGNDITTIVLQVDPERERISLGIKQLKEDPLNKYLIEQKQNNTVIGIISNIDNKNIKLKFHDGILGNIKLSDYKNNKIENILKYFKVGQNIEGKINNIDRKTRIVNIIINLKNIENKIMKKNKKNDFSNVMTEAFKAAKKYE
SIO_010081: GJU04_RS01450
subclass of: SO_0000673
so part of: GJU04_RS01450
location: complement(287190..288848)
location: region:287190-288848:-1
so has part: feature:287190-288848:-1:exon

WP_168893129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287190-288848:-1:exon

GJU04_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: aroA
locus tag: GJU04_RS01455
old locus tag: GJU04_01450
so part of: sequence
location: complement(289159..290451)
location: region:289159-290451:-1
so has part: feature:289159-290451:-1:exon
subclass of: SO_0000010

position:289159:-1
position: 289159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290451:-1
position: 290451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289159-290451:-1:exon

GJU04_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: aroA
locus tag: GJU04_RS01455
old locus tag: GJU04_01450
EC number: 2.5.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007792293.1
GO function: GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-phosphoshikimate 1-carboxyvinyltransferase
translation: MKNILTLQPINKIQGSIFLPGSKSISNRVLLLSALAKGTTKLINLLNSDDINHMLNALKKLGINFILSKNKKECLIMGNNGIFSPKKKLKLFLGNAGTVIRPLTALLSLNDKCDVILTGEPRMKERPIKHLVDSLKNGGAIIKYLEKKNFPPIQIQGGFKGNKVIKINGSISSQFLTSLLIISPLIKGNTIININHNLVSKPYIDITIKLMKIFGIYVENNNYKQFKIYGQQSYISPGEYIIEGDASSASYFLSAAAIKGGTVKLENINKHSIQGDIKYINILQSMGATINYGKNYISCTKNTLKSINMDLNDIPDVAMTLAVTSLFARGVTTIKNIYNWRVKETDRLQAMSNELKKTGAKIITGNDYIIITPPKFINKVIIETYNDHRIAMCFSLLALSNNSVSIINPSCTSKTYPNFFKEFKKISFYN
SIO_010081: GJU04_RS01455
subclass of: SO_0000673
so part of: GJU04_RS01455
location: complement(289159..290451)
location: region:289159-290451:-1
so has part: feature:289159-290451:-1:exon

WP_168893130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289159-290451:-1:exon

GJU04_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: serC
locus tag: GJU04_RS01460
old locus tag: GJU04_01455
so part of: sequence
location: complement(290494..291588)
location: region:290494-291588:-1
so has part: feature:290494-291588:-1:exon
subclass of: SO_0000010

position:290494:-1
position: 290494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291588:-1
position: 291588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290494-291588:-1:exon

GJU04_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: serC
locus tag: GJU04_RS01460
old locus tag: GJU04_01455
EC number: 2.6.1.52
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004710028.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO process: GO:0006564 - L-serine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-phosphoserine/phosphohydroxythreonine transaminase
translation: MQKIFNFSPGPASLPYEVLKKAQNELINWNNLHVSVMEISHRTDDFMNLIKEIRKDLRELMNIPLEYEILFCQGGARTQFAAIPMNLLDYNETADYANIGHWSNEAIKEATKYCNPNIINPLKKKNGLYYIEKMKYWNMNNNSKYIHYCPNETIEGIAINEEPKLQNKTIIADLSSAILAKEINIKHYGMIYASAQKNIGPAGLTILIIKKKLILNNNKKRKELPSVLDYKIISKYNSMFNTPATFSLYLSGLVLKWLKKKGGIKYISKINKKKAELLYSTIDKSKFYINKIKNRNRSITNIVFHLKNPKKENLFLQKSQENGLYYLKGHKKIGGIRASIYNAMPIEGIKKLINFMNDFEKKYI
SIO_010081: GJU04_RS01460
subclass of: SO_0000673
so part of: GJU04_RS01460
location: complement(290494..291588)
location: region:290494-291588:-1
so has part: feature:290494-291588:-1:exon

WP_168893131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290494-291588:-1:exon

GJU04_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rodA
locus tag: GJU04_RS01465
old locus tag: GJU04_01460
so part of: sequence
location: complement(291656..292759)
location: region:291656-292759:-1
so has part: feature:291656-292759:-1:exon
subclass of: SO_0000010

position:291656:-1
position: 291656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292759:-1
position: 292759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291656-292759:-1:exon

GJU04_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rodA
locus tag: GJU04_RS01465
old locus tag: GJU04_01460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011126586.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein RodA
translation: MKKKNFNKFIHSVLHIDVILLLLIIIILIISLFITWSSTGTQNYIFLKHKIIQICIGFITMLVAAQIPPNVYKKYSFLFYCFTICLLIAVKFVGCTIKGAQRWLHINFITFQPSEIAKISVPLIVSYIINKNNYYINKKIFFRTIILILIPTILVAKQPDLGTAILIGLSGAIILFLAGLSWKRIFNSIILFIIFLPFAWVFLLHDYQRERILMLLKTHYDLLGKGYHIFQSKIAISSGGLFGKGWKHGTQSQLDFLPEKHTDFAFSVFAEEFGFIGVLLLITLYLLLIGRSLFLSFQCRDIFNKIIISGIILIFFLCIFINISMVSGLLPIVGIPLPLISYGGTSLVVIMANFGIIMSMYTHNSII
SIO_010081: GJU04_RS01465
subclass of: SO_0000673
so part of: GJU04_RS01465
location: complement(291656..292759)
location: region:291656-292759:-1
so has part: feature:291656-292759:-1:exon

WP_168893132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291656-292759:-1:exon

GJU04_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mrdA
locus tag: GJU04_RS01470
old locus tag: GJU04_01465
so part of: sequence
location: complement(292784..294670)
location: region:292784-294670:-1
so has part: feature:292784-294670:-1:exon
subclass of: SO_0000010

position:292784:-1
position: 292784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294670:-1
position: 294670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292784-294670:-1:exon

GJU04_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mrdA
locus tag: GJU04_RS01470
old locus tag: GJU04_01465
EC number: 3.4.16.4
inference: COORDINATES: protein motif:HMM:TIGR03423.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 2
translation: MYSKYTFLQNYKIKSKNFLQRTKLLIKIFLILLSILIYNLYYLQIKSFKKYKLQSEQNYVGFFFLKPNRGLIYDRNGIILAKNKSFYHIKIKPDNTNNFFQNVIFLQKFLKLKINKFNIINLIKSKIKKNPSKEIILKINLNNTQVSKFLVNKYQFPRMSIKIYQKRFYPEKKLFAHIIGYIHSSNNKKKIIFKKKKTIKNYTDNSSVGINGIEKYYQKKIYGTNGYQKIAVNNIGLYKYKICKKDAYTGSDIYLTVDYNLQKYIYSLMKDKKGAVIISDTRNGEILAMVSTPSFDPNLFLNNNKEKTNLHFLLKNNIITNNPLVNRAIQGIYPPASTIKPYIALLALNLNLINEYTILFDPGWWRIPKFNKIYKDWKKNGHGYLNINKAIQESSDSFFYRLAYNIGINKIYKWMNKFGYGKLTNIDLFNEKLGNMPTKQWKLQNIDTPWYIGDTISVGIGQSYWNATPIQIHNALTILVNNGISKPLHLYKKEKLNNIFTYYTHKKYKKVVNFSIYYWNIIKKGMFNVVNKKNGTLYKYFFNVKNYNIAAKTGTAQVFNLKNKKKYNINTIEEKLRDHKLIIAFAPFNHPKIAMTIIIENSNKNIFIGDIARKILDYIFENKKKILI
SIO_010081: GJU04_RS01470
subclass of: SO_0000673
so part of: GJU04_RS01470
location: complement(292784..294670)
location: region:292784-294670:-1
so has part: feature:292784-294670:-1:exon

WP_168893133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292784-294670:-1:exon

GJU04_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01475
old locus tag: GJU04_01470
so part of: sequence
location: complement(294703..295695)
location: region:294703-295695:-1
so has part: feature:294703-295695:-1:exon
subclass of: SO_0000010

position:294703:-1
position: 294703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295695:-1
position: 295695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294703-295695:-1:exon

GJU04_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01475
old locus tag: GJU04_01470
inference: COORDINATES: protein motif:HMM:NF017911.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKIFLKKIYADIYNKKYYCYIIMGSELFFIKKNITLLLKKLVKLNFIKNNIIIIDDNTLWESIFSKFIIIDFFCKKQIIHLIFLNKKNFLKSKKNINTLIKYIGINNILILEIHDYINLYIEKNFNNIINNKNIIIYKFNKLNNLQLLNWIYFRFKQLNLFINKNICILLHNFYSKNLMLLNQVLENIYIQKKNHNYLNNLFFKKNNNLNNSILEGTIKDSLILINQMKKNKQNIFIIFNKLQKNIFLIFKIYRNLKKYPLNIIFKKFLILPDKQNFFIKILKKINNKKIYLIIKLLLEIEINLKSFIINNYTEKYFWIDIERLILFVS
SIO_010081: GJU04_RS01475
subclass of: SO_0000673
so part of: GJU04_RS01475
location: complement(294703..295695)
location: region:294703-295695:-1
so has part: feature:294703-295695:-1:exon

WP_168893134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294703-295695:-1:exon

GJU04_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: leuS
locus tag: GJU04_RS01480
old locus tag: GJU04_01475
so part of: sequence
location: complement(295747..298302)
location: region:295747-298302:-1
so has part: feature:295747-298302:-1:exon
subclass of: SO_0000010

position:295747:-1
position: 295747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298302:-1
position: 298302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295747-298302:-1:exon

GJU04_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: leuS
locus tag: GJU04_RS01480
old locus tag: GJU04_01475
EC number: 6.1.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069972.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucine--tRNA ligase
translation: MKKEYFPKEIEFYVQKEWESKKTFKVIENNNKEKFYCLSMLPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLHPIGWDAFGLPAEIAAYNHNITPNIWTKNNIKYMKKQLKLLGFSFDWDREITTCNPNYYRWEQWFFLKLYNLGLAYKKKDIVNWCPIDKTILANEQVINQCCWRCNSLVKKKLVNQWFLKITSYAEELLNNLNKLDDWPQKVKNMQKNWIGKIEGIEIIFKIYNTNYKFNVFIEKKYFCILKNITFIKILYNHPICKKFIKNKKIKNFIKKYSSLSSLKRNKSLSNKINYINSELFAQNNIILKKKIQIIIVNYLSNYNEINATIGIPQYDKKDFIFIQKQKTSFIAQNKIFNLDKNIKNDNILLIKKLILKKKAFNKKYYHLKDWSISRQRIWGTPIPIIIKKNKKFIPLKENELPFIFPKKIFSTNIKENYSKKIKNNLDWFKYNNNGITGQLETDTFDTFIESSWYYARYTSINENKSMINKKNANYWLPVDQYIGGIEHATMHLIYFRFFHKLMRDIGLLNTDEPVKKLLCQGMVLANSYYYLDKEKKYHWIKEKNVFFDKKNNIYLDNKGRRIINHGMIKMSKSKNNGVDPQNIIEKYGADSLRLFIMFAAPPDMDLEWQETGIKGMYKFLKKIWKFIYEYKKLTFSYEEIEKDKLDSLYNKEQLIIQDYINKTIINITNNFEKNQSFNTIISSIMILFNKIKKYKIYNNIDYTIIFNSLLITLKMLYPFTPHFCFILWKYMGNKNDIDHTSWPVIIKINTKKIKNTFNLIIQINGKKKYKLSIPDQFKNKENNVKKYVLSHNNISKFLINIKIIKIIYIPQKILNIVTKKK
SIO_010081: GJU04_RS01480
subclass of: SO_0000673
so part of: GJU04_RS01480
location: complement(295747..298302)
location: region:295747-298302:-1
so has part: feature:295747-298302:-1:exon

WP_168893135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295747-298302:-1:exon

GJU04_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ybeY
locus tag: GJU04_RS01485
old locus tag: GJU04_01480
so part of: sequence
location: complement(298405..298866)
location: region:298405-298866:-1
so has part: feature:298405-298866:-1:exon
subclass of: SO_0000010

position:298405:-1
position: 298405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298866:-1
position: 298866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298405-298866:-1:exon

GJU04_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ybeY
locus tag: GJU04_RS01485
old locus tag: GJU04_01480
inference: COORDINATES: protein motif:HMM:TIGR00043.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rRNA maturation RNase YbeY
translation: MELNIILNYYNFCKNNHSLPLKGDILYWLYKIFSKKNIKKIELNISIVEKHSILKLNKKYLKIAKPTNVLSFLLERNFLKKTLLGDLILCKEIIEHEAFIQKKLLKSHWAHLIIHSCLHLLKYNHKNIKETCIMQLKEIKILNLLGYKNPYFK
SIO_010081: GJU04_RS01485
subclass of: SO_0000673
so part of: GJU04_RS01485
location: complement(298405..298866)
location: region:298405-298866:-1
so has part: feature:298405-298866:-1:exon

WP_168893136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298405-298866:-1:exon

GJU04_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: miaB
locus tag: GJU04_RS01490
old locus tag: GJU04_01485
so part of: sequence
location: complement(298885..300225)
location: region:298885-300225:-1
so has part: feature:298885-300225:-1:exon
subclass of: SO_0000010

position:298885:-1
position: 298885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300225:-1
position: 300225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298885-300225:-1:exon

GJU04_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: miaB
locus tag: GJU04_RS01490
old locus tag: GJU04_01485
EC number: 2.8.4.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014500123.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
translation: MPNDKLYIKTWGCQMNEYDSSKIADIMENKLNCQITKSVKDANILILNTCSVREKAQEKLFHQLGRWQILKKQNPEIIIGVGGCVASQEGEKILNRAFYVDIIFGPQTFHRLPQMIYKVRRFKKYLIDISFPKIEKFKFFPITKTKKASAFVSIIEGCNKYCTYCIVPHTRGKEISRPYKDILLEIKNLSNQGVKEIHLLGQNVNAYNYFDYQSKKYCTFPKLLVLISKIEDIKRIRFTTSHPKNFSTELINTYSNLPKLVNFLHLPVQSGSDKILSLMKRRYNISEYIKIINKIRNIRPNIQISSDFIVGFPGETKKDFNKTISLILDLDLDMSFSFIYSPRPGTPASKMKDNISILEKKKRLYLLQYYVKEQAKKFSLKMLNTIQIILVEGISIQNHKYFGKTENNRIVFFISEKNYIGQFIYVKILDTYIYSLYGKFISVYKN
SIO_010081: GJU04_RS01490
subclass of: SO_0000673
so part of: GJU04_RS01490
location: complement(298885..300225)
location: region:298885-300225:-1
so has part: feature:298885-300225:-1:exon

WP_168893137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298885-300225:-1:exon

GJU04_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01495
old locus tag: GJU04_01490
so part of: sequence
location: complement(300279..300350)
location: region:300279-300350:-1
so has part: feature:300279-300350:-1:exon
subclass of: SO_0000663

position:300279:-1
position: 300279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300350:-1
position: 300350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300279-300350:-1:exon

GJU04_RS01495
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01495
old locus tag: GJU04_01490
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(300315..300317),aa:Gln,seq:ttg)
SIO_010081: GJU04_RS01495
subclass of: SO_0000673
so part of: GJU04_RS01495
location: complement(300279..300350)
location: region:300279-300350:-1
so has part: feature:300279-300350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300279-300350:-1:exon

GJU04_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01500
old locus tag: GJU04_01495
so part of: sequence
location: complement(300372..300460)
location: region:300372-300460:-1
so has part: feature:300372-300460:-1:exon
subclass of: SO_0000663

position:300372:-1
position: 300372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300460:-1
position: 300460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300372-300460:-1:exon

GJU04_RS01500
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01500
old locus tag: GJU04_01495
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(300423..300425),aa:Leu,seq:tag)
SIO_010081: GJU04_RS01500
subclass of: SO_0000673
so part of: GJU04_RS01500
location: complement(300372..300460)
location: region:300372-300460:-1
so has part: feature:300372-300460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300372-300460:-1:exon

GJU04_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01505
old locus tag: GJU04_01500
so part of: sequence
location: complement(300476..300549)
location: region:300476-300549:-1
so has part: feature:300476-300549:-1:exon
subclass of: SO_0000663

position:300476:-1
position: 300476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300549:-1
position: 300549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300476-300549:-1:exon

GJU04_RS01505
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01505
old locus tag: GJU04_01500
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(300513..300515),aa:Met,seq:cat)
SIO_010081: GJU04_RS01505
subclass of: SO_0000673
so part of: GJU04_RS01505
location: complement(300476..300549)
location: region:300476-300549:-1
so has part: feature:300476-300549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300476-300549:-1:exon

GJU04_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: glnS
locus tag: GJU04_RS01510
old locus tag: GJU04_01505
so part of: sequence
location: 300650..302305
location: region:300650-302305:1
so has part: feature:300650-302305:1:exon
subclass of: SO_0000010

position:300650:1
position: 300650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302305:1
position: 302305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300650-302305:1:exon

GJU04_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: glnS
locus tag: GJU04_RS01510
old locus tag: GJU04_01505
EC number: 6.1.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516646.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--tRNA ligase
translation: MYKYNNFYKKNFIFKIIENDIKNKKYNLICTRFPPEPNGYLHIGHIKSICLNFSIAKFYKGKFFLRIDDTNPTTENIKYIKSIKKDLIWLGFKWDKNVKYTSDYFDLMYKYAIELIKNNLAYVDELDIKEIKKYRGTLLVPGKNSPYRNRLIKDNLKLFEKMRLGKFPEGSLSLRAKIDMTSKIIVMRDPVLYRIKFQYHHQTNKKWCIYPTYDFSHCISDAIEGITHSLCTLEFQDNKILYNWILNNISIKNHPKQYEFSKLNIEYGITSKRNISILIKNKIVSGWDDPRLLTISGLRRKGYTSSSLKNFCYNIGVTKQNNIIEMSFLESCIKSELNQLVPRTMAIIRPLKIIIDNFPLKKKIKLLIPNHPNNKDMGYKNIYFTKEIYIDVLDFSEIDQKNYKRLILGSKVKLRYAFVIKAKKIIKDKNNNIVCIHCIYYQDSLGKKINKKKIKGIIHWISCLYSKPAKFYLYDNLFTKKDINNNDNILKFLNKKSLLIYNGFIEKNLLKNSKNKRFQFEREGYFYFDKYYSNTNEIIFNRILSLKKNDK
SIO_010081: GJU04_RS01510
subclass of: SO_0000673
so part of: GJU04_RS01510
location: 300650..302305
location: region:300650-302305:1
so has part: feature:300650-302305:1:exon

WP_168893138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300650-302305:1:exon

GJU04_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: fldA
locus tag: GJU04_RS01515
old locus tag: GJU04_01510
so part of: sequence
location: complement(302357..302869)
location: region:302357-302869:-1
so has part: feature:302357-302869:-1:exon
subclass of: SO_0000010

position:302357:-1
position: 302357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302869:-1
position: 302869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302357-302869:-1:exon

GJU04_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: fldA
locus tag: GJU04_RS01515
old locus tag: GJU04_01510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004130478.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin FldA
translation: MSKIGIFYGSDTGNTENVAFKIQKQLNKKNSSVFNISKINQEDIKKYNTLLLGIPTWYYGEVQCDWEDFLPTLQKINFKDKHIGLFGCGDQEDYGEYFCDAIKIIYDIVKKNKAKIIGYWPTKGYHFNDTKSLKNKDYFLGLTIDEDRQSELTNLRIQTWVQQISKELKI
SIO_010081: GJU04_RS01515
subclass of: SO_0000673
so part of: GJU04_RS01515
location: complement(302357..302869)
location: region:302357-302869:-1
so has part: feature:302357-302869:-1:exon

WP_168893139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302357-302869:-1:exon

GJU04_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01520
old locus tag: GJU04_01515
so part of: sequence
location: complement(302897..303676)
location: region:302897-303676:-1
so has part: feature:302897-303676:-1:exon
subclass of: SO_0000010

position:302897:-1
position: 302897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303676:-1
position: 303676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302897-303676:-1:exon

GJU04_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01520
old locus tag: GJU04_01515
inference: COORDINATES: protein motif:HMM:NF024109.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MILSYLIIPNNNFFVKKKYTIVLLHGLFGNKKSLYIMGKFLNENLKYKIILIDIRNHGLSPSNKKMDYISLSKDILDTLNFLNIKKNIIIIGHSMGGKIAMKTSQFMSLDDIKTIIILDIAPVKYQYTNNIIFFALEQVYKKKILIRKDVFNIMKLYINDQYVINTLLKTFINGKWEFNYPILKNQYEKILDWNIIPKWHGKVFFLKGEQSNYINKIYYKNIFFQFPNAKIYNIPNAGHLLHIENTKLVFNLILKLCYK
SIO_010081: GJU04_RS01520
subclass of: SO_0000673
so part of: GJU04_RS01520
location: complement(302897..303676)
location: region:302897-303676:-1
so has part: feature:302897-303676:-1:exon

WP_168893140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302897-303676:-1:exon

GJU04_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: pgi
locus tag: GJU04_RS01525
old locus tag: GJU04_01520
so part of: sequence
location: 303831..305456
location: region:303831-305456:1
so has part: feature:303831-305456:1:exon
subclass of: SO_0000010

position:303831:1
position: 303831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305456:1
position: 305456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303831-305456:1:exon

GJU04_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: pgi
locus tag: GJU04_RS01525
old locus tag: GJU04_01520
EC number: 5.3.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672742.1
GO function: GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-6-phosphate isomerase
translation: MKNINPTKTSSWKYLKKHFQEIKKLNINTLFIKNPNRFKQFSINFDNRILFDYSKNIINQTTLNYLINLAKETKCFDAIYSMFYGKKINFTEQRSVLHTALRYNNNNLFLNHKEIYNNIDKILKKIKDISNNIILEKWKGYTNKKIKNIINIGIGGSQLGPLMVTETLKEYKNKLNLFFLSNIDSNQIINIINKIKPEESIFIIASKTFNTQETITNALSIKEWFIKKINIDLNKDIFSKHFIAVTNNINAAIKFGIDERNILPLLSEIGGRFSLWSSIGLVISLSIGFNNFKKLLQGANKMDYHFFSTPLDRNIPVIMALISIWYNNFWNSETEAIIPYCDNMRFLPSYLQQLNMESNGKSIDRNGDKISYQTSSIIWGDVGTNSQHSFFQMLHQGTKLIPCDFIAAAIPYNNKYKDHHTKLIANYIAQTKALAFGNINNIYKKDKDKIYKYCLGNKPSNSIFLKKITPYNLGLLISYYEHKVFIQGVILNIFSFDQWGVELGKKITNFLVENIDENIQEKITKYDCSSKGIIDFYKNFN
SIO_010081: GJU04_RS01525
subclass of: SO_0000673
so part of: GJU04_RS01525
location: 303831..305456
location: region:303831-305456:1
so has part: feature:303831-305456:1:exon

WP_168893141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303831-305456:1:exon

GJU04_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01530
old locus tag: GJU04_01525
so part of: sequence
location: complement(305493..307175)
location: region:305493-307175:-1
so has part: feature:305493-307175:-1:exon
subclass of: SO_0000010

position:305493:-1
position: 305493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307175:-1
position: 307175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305493-307175:-1:exon

GJU04_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01530
old locus tag: GJU04_01525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672614.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MINITNFTQFGLNKFILKALNDIGYIEPSPIQKKCIPYLLSSKDVLGIAQTGSGKTAAFILPLLNNLNLSIKKTQILILTPTRELAIQVTKAALLFAKYLNGISILALYGGQSYQVQFKRLKLGVQIIVATPGRLLDHIKRKTVNLFKLTSLVIDEADEMLRMGFIEDVEKILSTIPKKHQTSLFSATMPKRIKNITKKFMVHPHEIFIKTNIKTIPDIKQTYWLINSKKIDALMKFLETENFTAALIFVKTKTSTIEIADILKQYNYNSAALNGDMNQNNREKTLERFRNGKLDVLIATDIAARGLDVNRIDLVINYDIPMDIESYIHRIGRTGRAGRQGKSLSFIEYKEKRLLKNIEYKIKCNINEILLPNNTILYQKRIENLIKKIKEESKYINNVDLIKYKEIISTLIVENNINKEILITILLKLSQSKRPLILPPEPIPYNKVFNRKSNFNKNKRIKKYMDIYRINIGKKDKVEVRHIVGAIINELKINSNDLGNIKLFNNYSTIELTPIIKKNILKYSQNIKILNKNISFELLIVKKFYKKRLRSKFKKKYIKK
SIO_010081: GJU04_RS01530
subclass of: SO_0000673
so part of: GJU04_RS01530
location: complement(305493..307175)
location: region:305493-307175:-1
so has part: feature:305493-307175:-1:exon

WP_168893142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305493-307175:-1:exon

GJU04_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: pnp
locus tag: GJU04_RS01535
old locus tag: GJU04_01530
so part of: sequence
location: complement(307464..309563)
location: region:307464-309563:-1
so has part: feature:307464-309563:-1:exon
subclass of: SO_0000010

position:307464:-1
position: 307464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309563:-1
position: 309563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307464-309563:-1:exon

GJU04_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: pnp
locus tag: GJU04_RS01535
old locus tag: GJU04_01530
EC number: 2.7.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006687892.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MLNPIIHRFRYGNNTVTIETGMIARQATSSVMVSIDDTAVFVTLVVDNEVKLEQNFFPLSVHYQEKLYAAGRIPGNFFRREGRPNENEILISRLIDRPIRPLFKKGFLNETQIIATVMSINPEINPDIVAIIGASTVLNLAGIPFNGPFGTARVGYINNKYVLNPNIKDMKNSTLDLIVTSTRKAILMVEAKSNLLTEDQILNAIIYGHNEQQILINNIIELSNKIKKKSHTWILYPLNEQLKEKIYLLSYKKLVKAYDIKEKKYRMNEIDSIKHKILELVKKEKEYENISLYHLNEIFYELEKKIVRKNIINKNLRIDGREHDMIRNLDVRIGVLPRTHGSALFTRGETQSLVTATLGTNRDAQSLDDLLNNKTDNFLFHYNFPPYSVGEVGMMSSPKRREIGHGNLAKKSLIPVMPNIDIFPYTIRIVSEITESNGSSSMASVCGASLAMMDAGIPINNAVAGIAMGLIKENNNFIILSDILGDEDHLGDMDFKVAGTKNGITALQMDMKIEGINYKIIKLALFQAKLARLHILKVMKQAISTPRKNISEFAPRIYTLKINPEKIKDMIGKGGSVIRALTEETDTIIEIEDSGIVKIAAKNNEKIKFAIKRIKEITADIIVGKIYNGKVVRIVDFGAFISIGNGKEGLVHISQITNKHVNKVSDYLQILQNVFVKVTDIDKQGRIRLSIKAATIDKI
SIO_010081: GJU04_RS01535
subclass of: SO_0000673
so part of: GJU04_RS01535
location: complement(307464..309563)
location: region:307464-309563:-1
so has part: feature:307464-309563:-1:exon

WP_168893143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307464-309563:-1:exon

GJU04_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsO
locus tag: GJU04_RS01540
old locus tag: GJU04_01535
so part of: sequence
location: complement(309656..309925)
location: region:309656-309925:-1
so has part: feature:309656-309925:-1:exon
subclass of: SO_0000010

position:309656:-1
position: 309656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309925:-1
position: 309925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309656-309925:-1:exon

GJU04_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsO
locus tag: GJU04_RS01540
old locus tag: GJU04_01535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004915813.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MCFNTVQKIKIIKKYENHNKDKGSTKVQIALLTCKINYLNKHFAIHKKDHHSRRGLLNMISQRRKLLNYFKKKNLCDYNILIENLGLRR
SIO_010081: GJU04_RS01540
subclass of: SO_0000673
so part of: GJU04_RS01540
location: complement(309656..309925)
location: region:309656-309925:-1
so has part: feature:309656-309925:-1:exon

WP_168893144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309656-309925:-1:exon

GJU04_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rbfA
locus tag: GJU04_RS01545
old locus tag: GJU04_01540
so part of: sequence
location: complement(310625..310981)
location: region:310625-310981:-1
so has part: feature:310625-310981:-1:exon
subclass of: SO_0000010

position:310625:-1
position: 310625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310981:-1
position: 310981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310625-310981:-1:exon

GJU04_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rbfA
locus tag: GJU04_RS01545
old locus tag: GJU04_01540
inference: COORDINATES: protein motif:HMM:TIGR00082.1
GO function: GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MYRNQRIAYELKKQIAKILQHNINDIRINKFCTVTDIVISKDFSYAKIFIILSYKEEKLKNKKNSFFYLNKTTEYIRYMLKKKIKLRKIPKIKFFLDSSFKEGKYISNILNNLKIQKK
SIO_010081: GJU04_RS01545
subclass of: SO_0000673
so part of: GJU04_RS01545
location: complement(310625..310981)
location: region:310625-310981:-1
so has part: feature:310625-310981:-1:exon

WP_168893145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310625-310981:-1:exon

GJU04_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: infB
locus tag: GJU04_RS01550
old locus tag: GJU04_01545
so part of: sequence
location: complement(311032..313341)
location: region:311032-313341:-1
so has part: feature:311032-313341:-1:exon
subclass of: SO_0000010

position:311032:-1
position: 311032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313341:-1
position: 313341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311032-313341:-1:exon

GJU04_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: infB
locus tag: GJU04_RS01550
old locus tag: GJU04_01545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053885.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MIDAVINIKLLASEMKISIKNTIKYFSDIGIYKLENDIVNKEEKKNFLIYLKNKKIKNLKLLNIKKKNNILNNKKKILSQNNRNLLQKNSKINNQVLLKKKTLKKSKPFIKNNDKKNYNIDYKKNLELKKKKIYKNKKYYKKKINTDIFHRKINNKKKIINNKYKKKISKLYQNFSKPVKNVNRNIIINDTISITELSNKMAVKSTELIKIMINMGEKFSNINQKLDQETAQLIAEEMGHKVILRCENDIEKSLINDKNSSINRISIVRPPIVTIMGHVDHGKTSLLDYIFSSNITKKEAGGITQYINAYEIKFNNKQITFIDTPGHESFTSMRYRGSKITDIIVLVIAIDDGVMPQTIEAIQHAKKTKVSIIVAINKIDKKISNFEKIKNELSRYNILSEEWGGENIFVKISAKTGEGINNLLNAILLQAEMLELKSFNEGNAKGTVIESYLDKGKGPIASVIIKEGILKKGDITLCGYTYGKIKGLINSKGLDVLQAGPSTPIKILGLSEVPYAGDDLIVVKYEKQAKDIALYRKNKYREITLANKQKKIRKGFLNLNNKNIHEINLLVKTDVQGSIEAIKNTLINLSNDQINIKIIYSGVGEITETDISMAIANSKKHLIIIGFNVKANNIVKNIIKIENIQVIFFTIIYDLIKYMKKYIQKILIPKYKESILGLAKVRSIFTIPKIGIIAGCIVTFGIIKRNNLIKLVRDNKIIYKGIIDSLRRFKESVNEVRNGMECGIGIKNFNNINIGDKIEIFEKIELIKK
SIO_010081: GJU04_RS01550
subclass of: SO_0000673
so part of: GJU04_RS01550
location: complement(311032..313341)
location: region:311032-313341:-1
so has part: feature:311032-313341:-1:exon

WP_211080565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311032-313341:-1:exon

GJU04_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nusA
locus tag: GJU04_RS01555
old locus tag: GJU04_01550
so part of: sequence
location: complement(313369..314871)
location: region:313369-314871:-1
so has part: feature:313369-314871:-1:exon
subclass of: SO_0000010

position:313369:-1
position: 313369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314871:-1
position: 314871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313369-314871:-1:exon

GJU04_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nusA
locus tag: GJU04_RS01555
old locus tag: GJU04_01550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor NusA
translation: MNKEMLAVIEAVSNEKSLPREKIFEAMESALASATKKKYEQDIEVLVNIDRKNGNFNTFRRWLIVKKVNFPTKEITLDAARIEDNSLNLGDYIYDQINSIDFDRITTQTAKQVIVHKVREAEKAITIAQFKKQEGKILSGIVKKVNRGHLNLDLGHGVNAVILRSDMLPRENFRLGDRIRGLLFYIKEDVKETQLFISRSRIQMLIELFNIEVPEIGEGLIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAISNELNGERIDIVLWDSNPEKFIINAMSPADISSIILNKKIHVIDIIVEENNLAQAIGRNGQNIRLASQLSGWELNVMTKHDLYHKYKKEKNNIINMFMKHLNINYELSKKIVEDGNISSFKELISTPIEKLCKITNSFSLKIRDLKKIKKLAENINFNFPLAKKKNINNQFKKKLLTLKGINNQLSESLINKGILTIEKLAEQSIEDISDIDNLDQIKAGEIIMSARNLCWFNKKNNT
SIO_010081: GJU04_RS01555
subclass of: SO_0000673
so part of: GJU04_RS01555
location: complement(313369..314871)
location: region:313369-314871:-1
so has part: feature:313369-314871:-1:exon

WP_168893146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313369-314871:-1:exon

GJU04_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01560
old locus tag: GJU04_01555
so part of: sequence
location: complement(315125..315201)
location: region:315125-315201:-1
so has part: feature:315125-315201:-1:exon
subclass of: SO_0000663

position:315125:-1
position: 315125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315201:-1
position: 315201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315125-315201:-1:exon

GJU04_RS01560
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01560
old locus tag: GJU04_01555
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(315165..315167),aa:Met,seq:cat)
SIO_010081: GJU04_RS01560
subclass of: SO_0000673
so part of: GJU04_RS01560
location: complement(315125..315201)
location: region:315125-315201:-1
so has part: feature:315125-315201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315125-315201:-1:exon

GJU04_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01565
old locus tag: GJU04_01560
so part of: sequence
location: complement(315262..315347)
location: region:315262-315347:-1
so has part: feature:315262-315347:-1:exon
subclass of: SO_0000663

position:315262:-1
position: 315262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315347:-1
position: 315347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315262-315347:-1:exon

GJU04_RS01565
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01565
old locus tag: GJU04_01560
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(315311..315313),aa:Leu,seq:gag)
SIO_010081: GJU04_RS01565
subclass of: SO_0000673
so part of: GJU04_RS01565
location: complement(315262..315347)
location: region:315262-315347:-1
so has part: feature:315262-315347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315262-315347:-1:exon

GJU04_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: secG
locus tag: GJU04_RS01570
old locus tag: GJU04_01565
so part of: sequence
location: complement(315362..315634)
location: region:315362-315634:-1
so has part: feature:315362-315634:-1:exon
subclass of: SO_0000010

position:315362:-1
position: 315362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315634:-1
position: 315634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315362-315634:-1:exon

GJU04_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: secG
locus tag: GJU04_RS01570
old locus tag: GJU04_01565
inference: COORDINATES: protein motif:HMM:TIGR00810.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecG
translation: MYKLLLILFIFVSFFLVSIIMFQDNDDIDISASSSNTKSPFNTNMSNKILTKSIILLASLFFIISLLLSHINVKKYIKNIKLNNIVKNKI
SIO_010081: GJU04_RS01570
subclass of: SO_0000673
so part of: GJU04_RS01570
location: complement(315362..315634)
location: region:315362-315634:-1
so has part: feature:315362-315634:-1:exon

WP_168893147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315362-315634:-1:exon

GJU04_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01575
old locus tag: GJU04_01570
so part of: sequence
location: complement(316760..317005)
location: region:316760-317005:-1
so has part: feature:316760-317005:-1:exon
subclass of: SO_0000010

position:316760:-1
position: 316760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317005:-1
position: 317005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316760-317005:-1:exon

GJU04_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01575
old locus tag: GJU04_01570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYHKYFGTDEIKCTLGKLQINYSFIIKLDIVIEKIFFKKKYQNIIIGQYTIISGHITNIISQDLNISGLNLIYLRYNIYL
SIO_010081: GJU04_RS01575
subclass of: SO_0000673
so part of: GJU04_RS01575
location: complement(316760..317005)
location: region:316760-317005:-1
so has part: feature:316760-317005:-1:exon

WP_168893148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316760-317005:-1:exon

GJU04_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ftsH
locus tag: GJU04_RS01580
old locus tag: GJU04_01575
pseudo: true
so part of: sequence
location: complement(<317080..318882)
location: region:317080-318882:-1
so has part: feature:317080-318882:-1:exon
subclass of: SO_0000010

position:317080:-1
position: 317080
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:318882:-1
position: 318882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317080-318882:-1:exon

GJU04_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ftsH
locus tag: GJU04_RS01580
old locus tag: GJU04_01575
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462207.1
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
SIO_010081: GJU04_RS01580
subclass of: SO_0000673
so part of: GJU04_RS01580
location: complement(<317080..318882)
location: region:317080-318882:-1
so has part: feature:317080-318882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317080-318882:-1:exon

GJU04_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01585
old locus tag: GJU04_01580
so part of: sequence
location: complement(318928..319560)
location: region:318928-319560:-1
so has part: feature:318928-319560:-1:exon
subclass of: SO_0000010

position:318928:-1
position: 318928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319560:-1
position: 319560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318928-319560:-1:exon

GJU04_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01585
old locus tag: GJU04_01580
inference: COORDINATES: protein motif:HMM:NF013856.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SAM-dependent methyltransferase
translation: MNYKKKKKSKIWLKNNFKDFYIKKVKKNINKYRSRSWFKLAQIEKIDKIFKKDMKIIDLGSSPGGWSSFASFKIGNKGKIIACDILPMNYIPNVYFYKGNICDPIFFNKIKTKLNKIKVHIIMSDMSPNISGIKEIDIPRIIYLNELTLKLCYSKLKHNGTFLVKTFQGKGLTKFYNKINSMFEIVNIRKPNASKSQSNEIYIVAKRYKN
SIO_010081: GJU04_RS01585
subclass of: SO_0000673
so part of: GJU04_RS01585
location: complement(318928..319560)
location: region:318928-319560:-1
so has part: feature:318928-319560:-1:exon

WP_168893150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318928-319560:-1:exon

GJU04_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpoC
locus tag: GJU04_RS01590
old locus tag: GJU04_01585
so part of: sequence
location: complement(319711..323916)
location: region:319711-323916:-1
so has part: feature:319711-323916:-1:exon
subclass of: SO_0000010

position:319711:-1
position: 319711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323916:-1
position: 323916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319711-323916:-1:exon

GJU04_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpoC
locus tag: GJU04_RS01590
old locus tag: GJU04_01585
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013200298.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MKDLFNFLKSQKKIEEFDTIKLSLASSDMIKSWSFGEVKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELASPIAHIWFLKSLPSRIGLLLNMPLRDIEKILYFESYVVVKEGISTLEKKQILSEEQYMDLLEEFGDEFEAKIGAEAIQYLLKNINLKQECKILRNELSNTNSETKRKKIAKRIKLLESFIHSGNKPEWMIMNILPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVKNEKRMLQEAVDALLDNGRRGKAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGRLEIKGFATTIKAAKKMVEKEEPVVWDILDEVIKAHPILLNRAPTLHRLGIQAFEPILVEGKAIQLHPLVCAAYNADFDGDQMAVHIPLTLEAQLEARILMMSTNNILSPANGEPIIVPSQDVVLGIYYMTKDKINAYGEGMILTDSKEAERAYNVGQVDLHARVKVKIKEYTKNLLTNEWIKNSIIVNTTIGRAIFWNQVPKGIPYYMINKTLGKKDISNILNICYRILGLKSTVIFADQIMYTGFQYATKSGSSVGIDDIIIPNNKTSIINEAKLEVNEIQEQFQSGLVTAGERYNKVIDIWASANEKVAKAMMKNLSVEYITNQKGHIVKQSSFNNIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIIANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVITEDDCSTLGGIRISSIITGRDIKESLRERVLGRVTAEDVLKTDGKTVLIYRNTLLNEKYCNILEQYAIDNIKVRSVVCCETSFGVCSYCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRSAAESSIQVKDNGIIRLINTKSVINNTNKLVVISRNAELKVVDNLNKIIESYKIPYGAIITKKNGSNIIAGEIVSYWDPHTMPIITEVSGKIKFVDMLEGQTVIKQTDDLTGLVSFVVLDTSERPSIGRDFRPMIKILNENNEDIIIPGTDMPAHYFLPNKSIIHLKDESMINIGDILAKVPQESGGTKDITGGLPRVADLFEARKPKDAAILAEISGIISFGKETKGKRRIIITPMNSDIEPYEEMIPKWRQLNIFEGELINKGDIISDGPESPHDILRLRGVNAVTNYIINEVQDVYRLQGVKINDKHIEVIIRQMLRKATITKMGDSIFLEGEQLEVSIIDIENKKLKDQGKNIARYNRDLLGITKASLATSSFISAASFQETTRVLTESSVAGKSDELKGLKENVIVGRLIPAGTGYSYHTNRISKKKIDKKINNISSADSAAANLTELLNAN
SIO_010081: GJU04_RS01590
subclass of: SO_0000673
so part of: GJU04_RS01590
location: complement(319711..323916)
location: region:319711-323916:-1
so has part: feature:319711-323916:-1:exon

WP_168893151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319711-323916:-1:exon

GJU04_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpoB
locus tag: GJU04_RS01595
old locus tag: GJU04_01590
so part of: sequence
location: complement(323971..>327853)
location: region:323971-327853:-1
so has part: feature:323971-327853:-1:exon
subclass of: SO_0000010

position:323971:-1
position: 323971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327853:-1
position: 327853
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323971-327853:-1:exon

GJU04_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpoB
locus tag: GJU04_RS01595
old locus tag: GJU04_01590
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 2
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: LEAAFKSIFPISSYSGHSKLEYINYHLGTSLFNVKECHTRGMTYSAPIKVILRLIVYDKEKPELSIKNIREQEVYMGEIPLMTKNGTFIVNGIERVVVSQLHRSPGVFFDSDKGKTHSSGKILYNARIIPYRGSWLDFEFDPKDNIFVRIDRRRKLPVTVILRALDYDIEEILDTFFEKNIYKIKNNKIKMVLIPDRLRGETATFDIKHNNIIYIEKGKRITIRHINKLKKDHVKSINIPIEYMIGKRVIKDYVNKTTGEIIISANSPLSIDTINKIFKNHDTIETIFTNDLDHGNYISETLKLDNTNNRLDALVEIYRMMRPGEPPTKEAAEILFKKLFFVEDRYDLSPVGRMKFNLSLSRESILGTSILSKKDIIDVIKKLINIRNGNGNIDDIDHLGNRRIRSIGEMAENQFRIGLIRVERAVKERLSLGDIENLMPQDMINAKPISAALKEFFCSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSVYARTNQYGFLESPYILVKNGFITDKIHYLSSIEESNFIIAQANTNIDNNKYIKEQFVICRHKSESSLFKREQVHYMDVSTQQIVSIGASLIPFLEHDDANRALMGANMQRQAVPTLKTEKPLVGTGMERIVAIDSGVTIIAKNSGIVHYVDSSRIIIKKENNIFTNLDNIDIYHLEKYVRSNQNTCINQIPCVNLGELINKGDVLADGPATDLGELALGQNMRVAFMPWNGYNFEDSILLSEKVVQEDKFTTIHIQELSCISRDTKLGPEEITSDIPNVSESSLSKLDECGIVYIGAEVKNGDILVGKVTPKGETQLSPEEKLLRAIFGEKASDVKDTSLRVPNGVYGTIIDVQIFTRDGVKKDKRTIEIEEMQLKQIKEDLFVEQKIFEQNILFNIKKFLLKNNFLKKENITNFDINFVTSLSLEKKSKQKQLDDFINQYKEIKNIFQKKIKLQKIKITQGNDLAPGILKIIKVNLAVKRQIQAGDKMAGRHGNKGVISKICPIEDMPYDKNGTPVDIILNPLGVPSRMNIGQILETHLGLAAKGIGDRINILLKKQKNIEKIRNFLHKAYNIGNNIRQNINLNKFTDNEIFLLANNLKKGMPIATPVFDGAQENEIKELLKLSNLPVSGQIKLYDGRTGEAFEKPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTIKSDDVNGRTKMYKNIVDGNHQMDANIPESFNVLLKEIRSLGININLENK
SIO_010081: GJU04_RS01595
subclass of: SO_0000673
so part of: GJU04_RS01595
location: complement(323971..>327853)
location: region:323971-327853:-1
so has part: feature:323971-327853:-1:exon

WP_246208779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323971-327853:-1:exon

GJU04_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02290
so part of: sequence
location: complement(<327950..328095)
location: region:327950-328095:-1
so has part: feature:327950-328095:-1:exon
subclass of: SO_0000010

position:327950:-1
position: 327950
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:328095:-1
position: 328095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327950-328095:-1:exon

GJU04_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVYSQTEKKRIRKDFGKRPQVLNIPYLLSIQIDSFKKFIKRDLKGEYG
SIO_010081: GJU04_RS02290
subclass of: SO_0000673
so part of: GJU04_RS02290
location: complement(<327950..328095)
location: region:327950-328095:-1
so has part: feature:327950-328095:-1:exon

WP_246208786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327950-328095:-1:exon

GJU04_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplL
locus tag: GJU04_RS01600
old locus tag: GJU04_01595
so part of: sequence
location: complement(328201..328569)
location: region:328201-328569:-1
so has part: feature:328201-328569:-1:exon
subclass of: SO_0000010

position:328201:-1
position: 328201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328569:-1
position: 328569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328201-328569:-1:exon

GJU04_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplL
locus tag: GJU04_RS01600
old locus tag: GJU04_01595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004387079.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MSITKEQIIQAIESMSIMDIMELIKSIEKKFGVSSIRSNEKIDNKKKKEKEEKTEFNIYLKNIGKNKISVIKTVRSIMNLGLKEAKDLVESAPVILKESINKEEALDLEAKLKNSGAEIEIK
SIO_010081: GJU04_RS01600
subclass of: SO_0000673
so part of: GJU04_RS01600
location: complement(328201..328569)
location: region:328201-328569:-1
so has part: feature:328201-328569:-1:exon

WP_168893152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328201-328569:-1:exon

GJU04_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplJ
locus tag: GJU04_RS01605
old locus tag: GJU04_01600
so part of: sequence
location: complement(328611..329099)
location: region:328611-329099:-1
so has part: feature:328611-329099:-1:exon
subclass of: SO_0000010

position:328611:-1
position: 328611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329099:-1
position: 329099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328611-329099:-1:exon

GJU04_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplJ
locus tag: GJU04_RS01605
old locus tag: GJU04_01600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091181.1
GO component: GO:0015934 - large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MSLNITKKKMIVKKISKINKNALSAVIADFCGVNSNNLNKLRKKSRENDIVVNIIRNKLLKLIIKNSDFQCLEPLIHGPILIAYSLKHPGDAARLFKKFSKIDENFKIKAAAFGNKIISSKNINILANLPTYKEAITRFLIIMKDISIGKFLQILLEIKNIK
SIO_010081: GJU04_RS01605
subclass of: SO_0000673
so part of: GJU04_RS01605
location: complement(328611..329099)
location: region:328611-329099:-1
so has part: feature:328611-329099:-1:exon

WP_168893153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328611-329099:-1:exon

GJU04_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplA
locus tag: GJU04_RS01610
old locus tag: GJU04_01605
so part of: sequence
location: complement(329237..329938)
location: region:329237-329938:-1
so has part: feature:329237-329938:-1:exon
subclass of: SO_0000010

position:329237:-1
position: 329237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329938:-1
position: 329938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329237-329938:-1:exon

GJU04_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplA
locus tag: GJU04_RS01610
old locus tag: GJU04_01605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210673.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L1
translation: MGKLTKRMNVMYKNINLKEQFSIENAINNLKNLSKVKFIESIDISINLGIDPKKTEQNIRGNVCLPHGTGKNIKFAIFASGQEAINVKKLGIKLVGMEDLSTKITNGEKNFNVVISTPEAMSIVSKLGPILGPKGLMPNPKLGTITNNITETIKKIQNGQINFRNDKSGIIHVSIGKINFANNKIKENLQILLKTLKKFKPLKLKGNYIKKIYISSTMGISIEITKDCVNLIN
SIO_010081: GJU04_RS01610
subclass of: SO_0000673
so part of: GJU04_RS01610
location: complement(329237..329938)
location: region:329237-329938:-1
so has part: feature:329237-329938:-1:exon

WP_168893154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329237-329938:-1:exon

GJU04_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplK
locus tag: GJU04_RS01615
old locus tag: GJU04_01610
so part of: sequence
location: complement(329946..330377)
location: region:329946-330377:-1
so has part: feature:329946-330377:-1:exon
subclass of: SO_0000010

position:329946:-1
position: 329946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330377:-1
position: 330377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329946-330377:-1:exon

GJU04_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplK
locus tag: GJU04_RS01615
old locus tag: GJU04_01610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005763439.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MAKKIKTYVKLQVPAGSANPSPPIGPALGQHGVNIMDFCKNFNTKTSNLEKGTPIPVVITIYVDKTFTFITKTPPVSAMIKKILGIKKGSSKPKIDKIGVITKDQIRKIAEIKYVDMTGINITSIMSSIEGTARSMGLMIDKD
SIO_010081: GJU04_RS01615
subclass of: SO_0000673
so part of: GJU04_RS01615
location: complement(329946..330377)
location: region:329946-330377:-1
so has part: feature:329946-330377:-1:exon

WP_168893155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329946-330377:-1:exon

GJU04_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nusG
locus tag: GJU04_RS01620
old locus tag: GJU04_01615
so part of: sequence
location: complement(330403..330948)
location: region:330403-330948:-1
so has part: feature:330403-330948:-1:exon
subclass of: SO_0000010

position:330403:-1
position: 330403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330948:-1
position: 330948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330403-330948:-1:exon

GJU04_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nusG
locus tag: GJU04_RS01620
old locus tag: GJU04_01615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MNKFLKKKWYVIQARSGFEHRVAKSLKEYIKIHNMNNFFGKILIPTEAVVEIRGGQKYKSDRKFFPGYILIHMIMKEVSWHLVRSVPKVLGFVGGKPDNPLPISNKEVDIIINSLQKIGDKPRPKTIFDPGEIIRVKDGPFSDFNGIVEEVDYEKSRLKVSVSIFGRSTPVDLDFRQVEKG
SIO_010081: GJU04_RS01620
subclass of: SO_0000673
so part of: GJU04_RS01620
location: complement(330403..330948)
location: region:330403-330948:-1
so has part: feature:330403-330948:-1:exon

WP_168893156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330403-330948:-1:exon

GJU04_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: secE
locus tag: GJU04_RS01625
old locus tag: GJU04_01620
so part of: sequence
location: complement(330951..331337)
location: region:330951-331337:-1
so has part: feature:330951-331337:-1:exon
subclass of: SO_0000010

position:330951:-1
position: 330951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331337:-1
position: 331337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330951-331337:-1:exon

GJU04_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: secE
locus tag: GJU04_RS01625
old locus tag: GJU04_01620
inference: COORDINATES: protein motif:HMM:TIGR00964.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MNIINFKKSINKYNTDIIKWVISIVFLFIILIFNYNYQNINLSIRVFLFFFIFTLIIFIISSTNKGKKLFSFIYDARIETRKVIWPSYKDTWNTTLIIMIIIIIISFIFFILDNFLIYLISFLTGTRL
SIO_010081: GJU04_RS01625
subclass of: SO_0000673
so part of: GJU04_RS01625
location: complement(330951..331337)
location: region:330951-331337:-1
so has part: feature:330951-331337:-1:exon

WP_168893157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330951-331337:-1:exon

GJU04_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tuf
locus tag: GJU04_RS01630
old locus tag: GJU04_01625
so part of: sequence
location: complement(331487..332671)
location: region:331487-332671:-1
so has part: feature:331487-332671:-1:exon
subclass of: SO_0000010

position:331487:-1
position: 331487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332671:-1
position: 332671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331487-332671:-1:exon

GJU04_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tuf
locus tag: GJU04_RS01630
old locus tag: GJU04_01625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091576.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MSKKKFERSKPHINVGTIGHVDHGKTTLTAAITTVLSKKYGGSAKAFDQIDNAPEEKARGITINTSHVEYDTKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLARQVGVPYIIVFLNKCDMVDDEELLELVEMEVRDLLTQYNFPGDTTPIIQGSALKALEGDKKWEEKIIELANYLDTYIPNPIREIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIIGIRNTIKSICTGVEMFRKLLDEGRAGENVGILLRGIKREDIERGQVLAKPGSINPHTKFEAEVYILSKDEGGRHTAFFKGYRPQFYFRTTDVTGTIELPSNIEMVMPGDNINMIVTLIYPIAMTNGLRFAIREGGRTVGAGVVTKVLQ
SIO_010081: GJU04_RS01630
subclass of: SO_0000673
so part of: GJU04_RS01630
location: complement(331487..332671)
location: region:331487-332671:-1
so has part: feature:331487-332671:-1:exon

WP_168893158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331487-332671:-1:exon

GJU04_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: fusA
locus tag: GJU04_RS01635
old locus tag: GJU04_01630
so part of: sequence
location: complement(332725..334842)
location: region:332725-334842:-1
so has part: feature:332725-334842:-1:exon
subclass of: SO_0000010

position:332725:-1
position: 332725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334842:-1
position: 334842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332725-334842:-1:exon

GJU04_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: fusA
locus tag: GJU04_RS01635
old locus tag: GJU04_01630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MSRKTPITRYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWTGMFNQYKSHRINIIDTPGHVDFTIEVERSMRVLDGVVMIYCAVGGVQPQSETVWRQANKYKVPRIAFINKMDRMGANFTKVIQQIENNLLTEAVPLQLPIGTEHKFTGIIDLIQMKALNWSEKDQGISCNYTTIPLNMKKKVKLWRQKLIETAVESNEILLEKYLNGYEISIQEIKSSLRKRVLNNEITLITCGSAFKNKGVQALLDAIIDYLPSPKDIPPIQGISNNEKKKIITRKTNDNELFSALAFKIANDPFVGNLTFFRVYSGTISSGEIIYNSIKKQKERIGRIVQMHANKREEIKKVYAGDIAAAIGLKNVTTGDTLCDVNKCIILETMEFPEPVISIAIEPKTKIDQEKMGLALNRLIKEDPSLRSWTDEETNQTIIAGMGELHLEIIVDRMKREFNVSANIGKPQVSYRETIQNTITNIEGKYIKQTGGRGQYGHVVIDISPLKPQKNNISYVFTNDIKGGVIPNEYISAIDKSIQEQLKSGPMANYPVVNISVRLHYGSYHDVDSSELAFKLAAAIAFKNAFKKANPILLEPIMKVEVETPEEYMGDVIGDLNRRRGIIEGMNNISTGKTIRACVPLSEMFGYATDLRSYSQGRASYTMEFLKYTKAPNNIAKIIIESRSKS
SIO_010081: GJU04_RS01635
subclass of: SO_0000673
so part of: GJU04_RS01635
location: complement(332725..334842)
location: region:332725-334842:-1
so has part: feature:332725-334842:-1:exon

WP_168893159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332725-334842:-1:exon

GJU04_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsG
locus tag: GJU04_RS01640
old locus tag: GJU04_01635
so part of: sequence
location: complement(334974..335444)
location: region:334974-335444:-1
so has part: feature:334974-335444:-1:exon
subclass of: SO_0000010

position:334974:-1
position: 334974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335444:-1
position: 335444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334974-335444:-1:exon

GJU04_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsG
locus tag: GJU04_RS01640
old locus tag: GJU04_01635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MPRRRIISQRKILPDSQFESNLLAKFINILMVNGKKSIAESIVYSALNKITKKKGKKEIDIFLSALENVKPIVEVKSRRVGGSTYQVPVEIRPIRRNTLAMRWLINAARKRQEKSMILKLSNEILDALENKGNAVKKREEIHKMAEANKAFAHYRW
SIO_010081: GJU04_RS01640
subclass of: SO_0000673
so part of: GJU04_RS01640
location: complement(334974..335444)
location: region:334974-335444:-1
so has part: feature:334974-335444:-1:exon

WP_168893160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334974-335444:-1:exon

GJU04_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsL
locus tag: GJU04_RS01645
old locus tag: GJU04_01640
so part of: sequence
location: complement(335513..335884)
location: region:335513-335884:-1
so has part: feature:335513-335884:-1:exon
subclass of: SO_0000010

position:335513:-1
position: 335513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335884:-1
position: 335884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335513-335884:-1:exon

GJU04_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsL
locus tag: GJU04_RS01645
old locus tag: GJU04_01640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003852912.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MVTINQLVRKNRKRKIIKTNVPALNSSPQKRGVCTKVYTTTPKKPNSALRKVCRVRLTNGFEVTSYISGEGHNLQEHSVILIRGGRVKDLPGVRYHTIRGALDCTGVKDRKQGRSKYGTKKPK
SIO_010081: GJU04_RS01645
subclass of: SO_0000673
so part of: GJU04_RS01645
location: complement(335513..335884)
location: region:335513-335884:-1
so has part: feature:335513-335884:-1:exon

WP_168893281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335513-335884:-1:exon

GJU04_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tusB
locus tag: GJU04_RS01650
old locus tag: GJU04_01645
so part of: sequence
location: complement(335927..336226)
location: region:335927-336226:-1
so has part: feature:335927-336226:-1:exon
subclass of: SO_0000010

position:335927:-1
position: 335927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336226:-1
position: 336226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335927-336226:-1:exon

GJU04_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tusB
locus tag: GJU04_RS01650
old locus tag: GJU04_01645
EC number: 2.8.1.-
inference: COORDINATES: protein motif:HMM:NF010035.0
GO process: GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusB
translation: MLYTLFNSPSSCNFSLLLNILNKNDDLLLIQDGVIAGLKNSIFIQEIIKIKQKMKILIFAINDDILARGLNINISKEIIRIDYIKFVDLVIKNKKQIMW
SIO_010081: GJU04_RS01650
subclass of: SO_0000673
so part of: GJU04_RS01650
location: complement(335927..336226)
location: region:335927-336226:-1
so has part: feature:335927-336226:-1:exon

WP_168893161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335927-336226:-1:exon

GJU04_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tusC
locus tag: GJU04_RS01655
old locus tag: GJU04_01650
so part of: sequence
location: complement(336249..336614)
location: region:336249-336614:-1
so has part: feature:336249-336614:-1:exon
subclass of: SO_0000010

position:336249:-1
position: 336249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336614:-1
position: 336614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336249-336614:-1:exon

GJU04_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tusC
locus tag: GJU04_RS01655
old locus tag: GJU04_01650
EC number: 2.8.1.-
inference: COORDINATES: protein motif:HMM:NF001238.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusC
translation: MNKIAFIFSKSPYGNSVGKEGLDALISISSLTEDIALFFIGDGILQILKKQKTEKFLLKNYSISFGILKLCNINNYFICSKSLEILGIKNYKKKHWILPVQIINPLMWQKKISNYNIILNF
SIO_010081: GJU04_RS01655
subclass of: SO_0000673
so part of: GJU04_RS01655
location: complement(336249..336614)
location: region:336249-336614:-1
so has part: feature:336249-336614:-1:exon

WP_168893162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336249-336614:-1:exon

GJU04_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tusD
locus tag: GJU04_RS01660
old locus tag: GJU04_01655
so part of: sequence
location: complement(336614..337018)
location: region:336614-337018:-1
so has part: feature:336614-337018:-1:exon
subclass of: SO_0000010

position:337018:-1
position: 337018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336614-337018:-1:exon

GJU04_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tusD
locus tag: GJU04_RS01660
old locus tag: GJU04_01655
inference: COORDINATES: protein motif:HMM:NF001237.0
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusD
translation: MIFVILITEAPYNNQNSYSAYLFTKAVIQKKETIKSIFFYRDGVCNSNKNIKFNDNEFNLITSWKELSIENHINLYLCITSAKKRGLILEEKNSFNKDNIINYYQNNIINNYFKITTLSTFTKSILTCDRLVQF
SIO_010081: GJU04_RS01660
subclass of: SO_0000673
so part of: GJU04_RS01660
location: complement(336614..337018)
location: region:336614-337018:-1
so has part: feature:336614-337018:-1:exon

WP_168893163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336614-337018:-1:exon

GJU04_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: fkpA
locus tag: GJU04_RS01665
old locus tag: GJU04_01660
so part of: sequence
location: complement(337129..337974)
location: region:337129-337974:-1
so has part: feature:337129-337974:-1:exon
subclass of: SO_0000010

position:337129:-1
position: 337129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337974:-1
position: 337974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337129-337974:-1:exon

GJU04_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: fkpA
locus tag: GJU04_RS01665
old locus tag: GJU04_01660
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:NF008150.0
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MKFFNKKVSIFIILLVSIGLNLSTANAFTLNNTSWWNKNKTKTIIKKKIKNQKKKQNIESKKKVKNFKNDNEKMSYALGIIIGKYLSNTYQIQKTLRIVLEKKFILQGVADSLECKHKLSDDEIDRLLELYEKNVRNFTPDEAQDEANMSKMQGKKYIKDFLKKKNVKQTKSGLVYKIHKMGYGKKITNNNQIIVIKYTGKLIDGTEFDNTMPNKPLFISLKQVIAGWKEGLKYIKKGGKITLVVPPKLGYGSEITSGIPPNSTLIFEIELIDIMNSVSTK
SIO_010081: GJU04_RS01665
subclass of: SO_0000673
so part of: GJU04_RS01665
location: complement(337129..337974)
location: region:337129-337974:-1
so has part: feature:337129-337974:-1:exon

WP_168893164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337129-337974:-1:exon

GJU04_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: asd
locus tag: GJU04_RS01670
old locus tag: GJU04_01665
so part of: sequence
location: complement(338124..339236)
location: region:338124-339236:-1
so has part: feature:338124-339236:-1:exon
subclass of: SO_0000010

position:338124:-1
position: 338124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339236:-1
position: 339236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338124-339236:-1:exon

GJU04_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: asd
locus tag: GJU04_RS01670
old locus tag: GJU04_01665
EC number: 1.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013183030.1
GO function: GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate-semialdehyde dehydrogenase
translation: MKNVGFIGWRGMVGSVLIKRMLEKKDFNKINAIFFSTSQYGKSIPNFNIKNKNQKLENAYNFEKLFELDIIITCQGSKYTNEIYFKLRKKGWNGYWIDAASNLRTLDNTVIVLDPINLKDIQQKLNMGIKTFVGGNCTVSLMLMALGGLFKNNLIDWISVSTYQAASGAGAKFMKELILQIQYISNNIPDLIDYKSDNILNIEQEITKKMDSPNFPKKLFHTSLINNLIPWIDKKINNSGQTKEEWKGQYETNKILNTTKIVPIDGICVRIATLRSHSQSFTIKLNKNLSIDNIHNIINSHNKWVKIIPNNFNDTINFLTPSFVSGTLDIVVGRIKKLNIDKNCFSIFSVGDQLLWGASEPLRRMLKLLI
SIO_010081: GJU04_RS01670
subclass of: SO_0000673
so part of: GJU04_RS01670
location: complement(338124..339236)
location: region:338124-339236:-1
so has part: feature:338124-339236:-1:exon

WP_168893165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338124-339236:-1:exon

GJU04_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ung
locus tag: GJU04_RS01675
old locus tag: GJU04_01670
so part of: sequence
location: complement(339370..340050)
location: region:339370-340050:-1
so has part: feature:339370-340050:-1:exon
subclass of: SO_0000010

position:339370:-1
position: 339370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340050:-1
position: 340050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339370-340050:-1:exon

GJU04_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ung
locus tag: GJU04_RS01675
old locus tag: GJU04_01670
EC number: 3.2.2.27
inference: COORDINATES: protein motif:HMM:NF003589.0
GO function: GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MNNKNFLWKFFFHQEKKKKYFIKLIKKINIDISNNKIIYPKKKYIFNIFKKINFNNLKVVIIGQDPYYGFNQANGLAFSVMPNVNIPPTLKNIYKTIKIDIPNFTIPNHGYLINWVNEGVMLLNCVLTVEKEKPQSHNNIGWEIFTNNVIKIINYNYKNIVFLLWGTYAKKKINLITSRHLILTTSHPSPLSFYKGFSTCKHFSKTNKYLILKKKKPINWNINNIN
SIO_010081: GJU04_RS01675
subclass of: SO_0000673
so part of: GJU04_RS01675
location: complement(339370..340050)
location: region:339370-340050:-1
so has part: feature:339370-340050:-1:exon

WP_168893166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339370-340050:-1:exon

GJU04_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsF
locus tag: GJU04_RS01680
old locus tag: GJU04_01675
so part of: sequence
location: 340190..340558
location: region:340190-340558:1
so has part: feature:340190-340558:1:exon
subclass of: SO_0000010

position:340190:1
position: 340190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340558:1
position: 340558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340190-340558:1:exon

GJU04_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsF
locus tag: GJU04_RS01680
old locus tag: GJU04_01675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011054049.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MIKYYEIILMINPDQSDQINNITEYYKKFIIKNNGSISRFEDWGRRQLAYPILKLHKAHYILINITLNHTNIIKDLEKSLRINEHIIRYLIIKTKTDRKNISCILKLRDERQEKRNDIIKRI
SIO_010081: GJU04_RS01680
subclass of: SO_0000673
so part of: GJU04_RS01680
location: 340190..340558
location: region:340190-340558:1
so has part: feature:340190-340558:1:exon

WP_246208780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340190-340558:1:exon

GJU04_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsR
locus tag: GJU04_RS01685
old locus tag: GJU04_01680
so part of: sequence
location: 340609..340836
location: region:340609-340836:1
so has part: feature:340609-340836:1:exon
subclass of: SO_0000010

position:340609:1
position: 340609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340836:1
position: 340836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340609-340836:1:exon

GJU04_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsR
locus tag: GJU04_RS01685
old locus tag: GJU04_01680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MVRYFRRRKFCRFTAEGIKEIDYKDIYLLKNFITESGKIVPSRITGTKAKYQRQLTKAIKLARYLSLISYTDHHR
SIO_010081: GJU04_RS01685
subclass of: SO_0000673
so part of: GJU04_RS01685
location: 340609..340836
location: region:340609-340836:1
so has part: feature:340609-340836:1:exon

WP_168893167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340609-340836:1:exon

GJU04_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplI
locus tag: GJU04_RS01690
old locus tag: GJU04_01685
so part of: sequence
location: 340898..341350
location: region:340898-341350:1
so has part: feature:340898-341350:1:exon
subclass of: SO_0000010

position:340898:1
position: 340898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341350:1
position: 341350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340898-341350:1:exon

GJU04_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplI
locus tag: GJU04_RS01690
old locus tag: GJU04_01685
inference: COORDINATES: protein motif:HMM:TIGR00158.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MKIILLDSISGLGEKSQIIDVKPGYARNFLIPKNKGIIATKNNIGFLKKKLLEKKSKLLDILNKAKLKLKKFKHIEKIIIKAKAGKNGTLFGSIGKIDIVNKLKEIGFEIFKKEIKLPKGGFKKIGEYNIIFQFHEKVFVEKIISIINSE
SIO_010081: GJU04_RS01690
subclass of: SO_0000673
so part of: GJU04_RS01690
location: 340898..341350
location: region:340898-341350:1
so has part: feature:340898-341350:1:exon

WP_168893168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340898-341350:1:exon

GJU04_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ffs
locus tag: GJU04_RS01695
old locus tag: GJU04_01690
so part of: sequence
location: 341424..341520
location: region:341424-341520:1
so has part: feature:341424-341520:1:exon
subclass of: SO_0000642

position:341424:1
position: 341424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341520:1
position: 341520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341424-341520:1:exon

GJU04_RS01695
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2675779
nc RNA class: SRP_RNA
gene: ffs
locus tag: GJU04_RS01695
old locus tag: GJU04_01690
product: signal recognition particle sRNA small type
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00169
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: GJU04_RS01695
subclass of: SO_0000673
so part of: GJU04_RS01695
location: 341424..341520
location: region:341424-341520:1
so has part: feature:341424-341520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341424-341520:1:exon

GJU04_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dnaX
locus tag: GJU04_RS01700
old locus tag: GJU04_01695
so part of: sequence
location: 341553..342656
location: region:341553-342656:1
so has part: feature:341553-342656:1:exon
subclass of: SO_0000010

position:341553:1
position: 341553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342656:1
position: 342656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341553-342656:1:exon

GJU04_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dnaX
locus tag: GJU04_RS01700
old locus tag: GJU04_01695
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR02397.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MNSHVLAIKWRPQSFNDVIGQNHVIQAIKYSLFKKKIHPAWILSGSRGVGKTTIARIFAMGLSCLKGITHNPCGVCENCVSIKNNSFLDLIELDSASKTKVEDIREILEIIYYLPVKGRYKIYIFDEFHMLSKHSFNALLKIIEEPPEYVKFIFATTELQKIPITITSRCMQFNLKLIEKNIILNQLKKILNAEKIKYNEEALDILSHAAYGSMRDALSLTDQLISMGSITIDNVYLMLGLIKKEYLFLLIYNLKTKKNNLIFNLIDKISMFNINWDNIITEIMMLIHNILKIKILSKNSDSFLKNLNFEKNILIFYQKILNNFSENELKFLYKLLHSAKKNLYLAPNPKIGFEMIILEILIYFKNY
SIO_010081: GJU04_RS01700
subclass of: SO_0000673
so part of: GJU04_RS01700
location: 341553..342656
location: region:341553-342656:1
so has part: feature:341553-342656:1:exon

WP_168893169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341553-342656:1:exon

GJU04_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: htpG
locus tag: GJU04_RS01705
old locus tag: GJU04_01700
so part of: sequence
location: 342758..344644
location: region:342758-344644:1
so has part: feature:342758-344644:1:exon
subclass of: SO_0000010

position:342758:1
position: 342758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344644:1
position: 344644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342758-344644:1:exon

GJU04_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: htpG
locus tag: GJU04_RS01705
old locus tag: GJU04_01700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011147976.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone HtpG
translation: MEKKETRSFKSEVKQLLHLMIHSLYSNKEIFLRELISNASDAIDKLKFKTLSNPDLYENNSLLKVQISINKEKRLIIISDNGIGMSRKEVIENLGTIAKSGTKDFIKSLNLSSDKKSEINSQLIGQFGVGFYSAFIVSDKVSIKTRLAGLPLHKGVFWESTGEGNYYIANINKELRGTEIILHIRPKYDEFLDEWRIKTIISKYSEHIALPIEIKMYNDKEKKYFWEQINKAQALWLRNKTEISEKEYKEFYKQLTYDNLDPIIWSHNHVEGKQEYISLLYIPSNIPWDIRNRDYKNGLKLYVQRVFIMEDAEQLLPKYLRFIRGLVDSNDLPLNISREILQKNSIIHNMKITLTKKVLNMLMNLSKNKNIYNNFWKKFGVVFKEGPAEDINNKNIILKLLRFSSTYNNNSEQNVSLEEYSKRMIKGQNKIYFLTSDNYISAKNSPHLEFFYKKGIEVLLLIDHIDEWMMSYITEFEGKNFQSISKQDDSSDEFIKKNDNNIKNEIKEKFEPSLKKIQNLLGNKIKKVTLTNRLINTPAIVTTDVNEMSTQMAKLFAAAGQEIPEIKYNFELNPNHILIKKILEIKDEKYFFEFISLLLEEAILAEKGTLDNPHEFINRVNNFLSKKE
SIO_010081: GJU04_RS01705
subclass of: SO_0000673
so part of: GJU04_RS01705
location: 342758..344644
location: region:342758-344644:1
so has part: feature:342758-344644:1:exon

WP_168893170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342758-344644:1:exon

GJU04_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: aroK
locus tag: GJU04_RS01710
old locus tag: GJU04_01705
so part of: sequence
location: 344953..345477
location: region:344953-345477:1
so has part: feature:344953-345477:1:exon
subclass of: SO_0000010

position:344953:1
position: 344953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345477:1
position: 345477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344953-345477:1:exon

GJU04_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: aroK
locus tag: GJU04_RS01710
old locus tag: GJU04_01705
EC number: 2.7.1.71
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate kinase AroK
translation: MAEKRNIFLIGPMGAGKSTIGRHLANLLKMDFFDSDQEIERRTGADINWVFDVEGEKGFRKREKKIINEITQKKGIILATGGGSIQSKETRKFLSSRGIVVYLKTTIEKQLSRTKRDKKRPLLKNKNQLAKEILEKLAKKRNHLYNEIADIIIKTDEQSAKIVANQLIHLLEKN
SIO_010081: GJU04_RS01710
subclass of: SO_0000673
so part of: GJU04_RS01710
location: 344953..345477
location: region:344953-345477:1
so has part: feature:344953-345477:1:exon

WP_168893171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344953-345477:1:exon

GJU04_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: aroB
locus tag: GJU04_RS01715
old locus tag: GJU04_01710
so part of: sequence
location: 345496..346593
location: region:345496-346593:1
so has part: feature:345496-346593:1:exon
subclass of: SO_0000010

position:345496:1
position: 345496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346593:1
position: 346593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345496-346593:1:exon

GJU04_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: aroB
locus tag: GJU04_RS01715
old locus tag: GJU04_01710
EC number: 4.2.3.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012776265.1
GO function: GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-dehydroquinate synthase
translation: MGKTILVSTKKHTYPIVIDFNLFDKPLSLFFLKKGDSVMIVTNKIIFSLYFKKVFNQLHNIGVRINHVIIPDGEEYKTLITVNIIFTALIKNLHNRDTTLIALGGGVIGDITGFAASIYQRGVRFIQIPTTLLSQVDSAVGGKTAVNHILGKNMIGSFYQPNIVIINLNCLDTLSKREFSAGLAEVIKYGIIFDEKFFSWLENNINKLFNLDKQSILYCIKKCCKLKSQIIYEDEYEKNKRALLNLGHTYGHAIEAELGYGKWLHGEAVSAGIVIAAITSKKLNLINNKDIIRIINLLRKCNLPVKGPNNMYIKQYFKHIYRDKKINKNKIHIILPIKIGKAIIYNNISEKIISDAINENKNLIF
SIO_010081: GJU04_RS01715
subclass of: SO_0000673
so part of: GJU04_RS01715
location: 345496..346593
location: region:345496-346593:1
so has part: feature:345496-346593:1:exon

WP_168893172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345496-346593:1:exon

GJU04_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpe
locus tag: GJU04_RS01720
old locus tag: GJU04_01715
so part of: sequence
location: 346635..347309
location: region:346635-347309:1
so has part: feature:346635-347309:1:exon
subclass of: SO_0000010

position:346635:1
position: 346635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347309:1
position: 347309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346635-347309:1:exon

GJU04_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpe
locus tag: GJU04_RS01720
old locus tag: GJU04_01715
EC number: 5.1.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000816282.1
GO function: GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribulose-phosphate 3-epimerase
translation: MENKLIAASILSANFTCLGKEINNALKAGVDIIHFDVMDNHYVPNLTIGPLVLKSLRENNIKCRIDIHLMTKKIDNLIINFIKLGANSIIIHPESSNHLDRSISLIKSYGCKAGLALNPSTSLNYLDYLIHKLDIILVMSVNPGFEGQKFLNYIYKKIIQIRKIINKKKKKILLEVDGGININNIKKIAISGADVFIIGSALFKNKLSYNKIIKDIRLKLNKIC
SIO_010081: GJU04_RS01720
subclass of: SO_0000673
so part of: GJU04_RS01720
location: 346635..347309
location: region:346635-347309:1
so has part: feature:346635-347309:1:exon

WP_168893173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346635-347309:1:exon

GJU04_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: trpS
locus tag: GJU04_RS01725
old locus tag: GJU04_01720
so part of: sequence
location: 347334..348332
location: region:347334-348332:1
so has part: feature:347334-348332:1:exon
subclass of: SO_0000010

position:347334:1
position: 347334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348332:1
position: 348332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347334-348332:1:exon

GJU04_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: trpS
locus tag: GJU04_RS01725
old locus tag: GJU04_01720
EC number: 6.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070385.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MKKKIIFSGIQPTGLLTIGNYIGALSQWKKLQKKYFCIYCIADLHSLTIYQKKNILNKNILDILAIFLACGIDPENNIIFLQSHVPQHVQLNWILNCFANFGEIKRMTQFKQKISCNTNINIGLFNYPILMAADILLYQTNKVPVGKDQIQHIELTRNLAYRFNNIYGNIFTIPEKVLNKNGSCIMSLINPNKKMSKSDPNNNSIISLFDNNFIIEQKIKNAITDSDFPPKIKYDLKNKPGISNLLSILANITECSIEQLEQNFKNKNYNNLKESIIDYLCLFLNKLRKKYFFYRKNEKYLKNIMFNGAKKAKKHADFTLKKVYDVIGLDFF
SIO_010081: GJU04_RS01725
subclass of: SO_0000673
so part of: GJU04_RS01725
location: 347334..348332
location: region:347334-348332:1
so has part: feature:347334-348332:1:exon

WP_168893174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347334-348332:1:exon

GJU04_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: crp
locus tag: GJU04_RS01730
old locus tag: GJU04_01725
so part of: sequence
location: complement(348356..348985)
location: region:348356-348985:-1
so has part: feature:348356-348985:-1:exon
subclass of: SO_0000010

position:348356:-1
position: 348356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348985:-1
position: 348985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348356-348985:-1:exon

GJU04_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: crp
locus tag: GJU04_RS01730
old locus tag: GJU04_01725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001470493.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cAMP-activated global transcriptional regulator CRP
translation: MFLKLQKNSTLEWFLSYCHINKYPAKMILIKQGSISKNLFYILKGVIVVSIKNKNGKEIILTYLSTGDFVGEMGIFSHNYKEITLVKLKTECELAKISYKNFFNLIKINNNIIMKVSEQLSNKLQMTYQKVSNLAFLDVTRRISKTLLNLAKSPEAITHPDGMQIKITRQEIGKIVGCSRETVGRTLKILKKRNLIYAHGKTIVVYGTR
SIO_010081: GJU04_RS01730
subclass of: SO_0000673
so part of: GJU04_RS01730
location: complement(348356..348985)
location: region:348356-348985:-1
so has part: feature:348356-348985:-1:exon

WP_168893175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348356-348985:-1:exon

GJU04_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01735
old locus tag: GJU04_01730
so part of: sequence
location: complement(349041..349113)
location: region:349041-349113:-1
so has part: feature:349041-349113:-1:exon
subclass of: SO_0000663

position:349041:-1
position: 349041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349113:-1
position: 349113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349041-349113:-1:exon

GJU04_RS01735
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01735
old locus tag: GJU04_01730
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(349078..349080),aa:Thr,seq:ggt)
SIO_010081: GJU04_RS01735
subclass of: SO_0000673
so part of: GJU04_RS01735
location: complement(349041..349113)
location: region:349041-349113:-1
so has part: feature:349041-349113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349041-349113:-1:exon

GJU04_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01740
old locus tag: GJU04_01735
so part of: sequence
location: complement(349170..349240)
location: region:349170-349240:-1
so has part: feature:349170-349240:-1:exon
subclass of: SO_0000663

position:349170:-1
position: 349170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349240:-1
position: 349240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349170-349240:-1:exon

GJU04_RS01740
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01740
old locus tag: GJU04_01735
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(349206..349208),aa:Gly,seq:tcc)
SIO_010081: GJU04_RS01740
subclass of: SO_0000673
so part of: GJU04_RS01740
location: complement(349170..349240)
location: region:349170-349240:-1
so has part: feature:349170-349240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349170-349240:-1:exon

GJU04_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01745
old locus tag: GJU04_01740
so part of: sequence
location: complement(349272..349353)
location: region:349272-349353:-1
so has part: feature:349272-349353:-1:exon
subclass of: SO_0000663

position:349272:-1
position: 349272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349353:-1
position: 349353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349272-349353:-1:exon

GJU04_RS01745
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01745
old locus tag: GJU04_01740
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(349317..349319),aa:Tyr,seq:gta)
SIO_010081: GJU04_RS01745
subclass of: SO_0000673
so part of: GJU04_RS01745
location: complement(349272..349353)
location: region:349272-349353:-1
so has part: feature:349272-349353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349272-349353:-1:exon

GJU04_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01750
old locus tag: GJU04_01745
so part of: sequence
location: complement(349389..349461)
location: region:349389-349461:-1
so has part: feature:349389-349461:-1:exon
subclass of: SO_0000663

position:349389:-1
position: 349389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349461:-1
position: 349461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349389-349461:-1:exon

GJU04_RS01750
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01750
old locus tag: GJU04_01745
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(349426..349428),aa:Thr,seq:tgt)
SIO_010081: GJU04_RS01750
subclass of: SO_0000673
so part of: GJU04_RS01750
location: complement(349389..349461)
location: region:349389-349461:-1
so has part: feature:349389-349461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349389-349461:-1:exon

GJU04_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rrf
locus tag: GJU04_RS01755
old locus tag: GJU04_01750
so part of: sequence
location: complement(349492..349608)
location: region:349492-349608:-1
so has part: feature:349492-349608:-1:exon
subclass of: SO_0000573

position:349492:-1
position: 349492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349608:-1
position: 349608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349492-349608:-1:exon

GJU04_RS01755
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 2675779
gene: rrf
locus tag: GJU04_RS01755
old locus tag: GJU04_01750
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: GJU04_RS01755
subclass of: SO_0000673
so part of: GJU04_RS01755
location: complement(349492..349608)
location: region:349492-349608:-1
so has part: feature:349492-349608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349492-349608:-1:exon

GJU04_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01760
old locus tag: GJU04_01755
so part of: sequence
location: complement(349671..352602)
location: region:349671-352602:-1
so has part: feature:349671-352602:-1:exon
subclass of: SO_0000573

position:349671:-1
position: 349671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352602:-1
position: 352602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349671-352602:-1:exon

GJU04_RS01760
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 2675779
locus tag: GJU04_RS01760
old locus tag: GJU04_01755
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: GJU04_RS01760
subclass of: SO_0000673
so part of: GJU04_RS01760
location: complement(349671..352602)
location: region:349671-352602:-1
so has part: feature:349671-352602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349671-352602:-1:exon

GJU04_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02300
old locus tag: GJU04_01760
so part of: sequence
location: complement(352748..354321)
location: region:352748-354321:-1
so has part: feature:352748-354321:-1:exon
subclass of: SO_0000573

position:352748:-1
position: 352748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354321:-1
position: 354321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352748-354321:-1:exon

GJU04_RS02300
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 2675779
locus tag: GJU04_RS02300
old locus tag: GJU04_01760
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: GJU04_RS02300
subclass of: SO_0000673
so part of: GJU04_RS02300
location: complement(352748..354321)
location: region:352748-354321:-1
so has part: feature:352748-354321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352748-354321:-1:exon

GJU04_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: murI
locus tag: GJU04_RS01770
old locus tag: GJU04_01765
so part of: sequence
location: complement(354649..355461)
location: region:354649-355461:-1
so has part: feature:354649-355461:-1:exon
subclass of: SO_0000010

position:354649:-1
position: 354649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355461:-1
position: 355461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354649-355461:-1:exon

GJU04_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: murI
locus tag: GJU04_RS01770
old locus tag: GJU04_01765
EC number: 5.1.1.3
inference: COORDINATES: protein motif:HMM:TIGR00067.1
GO function: GO:0008881 - glutamate racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate racemase
translation: MKQIFLRSQNTIFIFDSGLGGITIYNYIKSIFLNINFIYLLDNKYFPYGNKSKNFILQRLKKILKKISNYYNITLAVIACNTASVSSLPIIRNYFNFPIIGVTPVIDLAIKQTKNNVIGFLATNTTLKNFKIRKKINFLNKKYKIKTISSSKLVFLAEKKLLGYKIKINEIKKIFKSWDNFKIFPDTIILGCTHFPLILNELKTIFPKNIYFLDSKKSIILKFKKYLNYNQINVKKKENVVLYTEKSKYIKQIEFLFLKKGFKKISSFKI
SIO_010081: GJU04_RS01770
subclass of: SO_0000673
so part of: GJU04_RS01770
location: complement(354649..355461)
location: region:354649-355461:-1
so has part: feature:354649-355461:-1:exon

WP_168893176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354649-355461:-1:exon

GJU04_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01775
old locus tag: GJU04_01770
so part of: sequence
location: 355598..356749
location: region:355598-356749:1
so has part: feature:355598-356749:1:exon
subclass of: SO_0000010

position:355598:1
position: 355598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356749:1
position: 356749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355598-356749:1:exon

GJU04_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01775
old locus tag: GJU04_01770
inference: COORDINATES: protein motif:HMM:NF012488.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class V-fold PLP-dependent enzyme
translation: MKKLIYLDYASTTPTDQRVLKKMNNYLTIEGVFGNSSSSNYLGIKTKKKIENARINIANIIGSNQEEIFFTSSATESINLAIKGIIYSYFTNKKKYIITSNMEHKSVLETCNFLKKLGIKIIYMTNSNIGVLNLNLLENKIINKTILVSIMHINNEIGTINNIKTIGNICKKKNVFFHVDATQSVGKYSLNLSKMNIDLLSFSSHKFYGPKGIGVLYVKKKSKIILTPLLHGGGQEKGLRSGTLANHQIIGMSTALIIANNEIKKEKKRIKILKKKLWNGIKNISGIYLNGSLQNSSPYIINIGFKNIFNKILMLEMRNILISSSSACNSNKYNISHVLKALGLKKELIQSSIRISFGRFTTEEEIVFLIKKLHIIVEKIRLK
SIO_010081: GJU04_RS01775
subclass of: SO_0000673
so part of: GJU04_RS01775
location: 355598..356749
location: region:355598-356749:1
so has part: feature:355598-356749:1:exon

WP_168893177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355598-356749:1:exon

GJU04_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: pykF
locus tag: GJU04_RS01780
old locus tag: GJU04_01775
so part of: sequence
location: complement(356799..358208)
location: region:356799-358208:-1
so has part: feature:356799-358208:-1:exon
subclass of: SO_0000010

position:356799:-1
position: 356799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358208:-1
position: 358208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356799-358208:-1:exon

GJU04_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: pykF
locus tag: GJU04_RS01780
old locus tag: GJU04_01775
EC number: 2.7.1.40
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1
GO function: GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate kinase PykF
translation: MKKTKIVCTIGPSSESKYILSNLLNLGMNIIRLNFSHGTHDDHQKRIDTLKKIIKKTGKNAAILLDTKGPEIRTMKLYQGKDVYLYTGKKFILTTDKSVIGNNKCVAITYPSLINDLNIGNKILIDDGLIAMKVLKIINDKIICKILNNGKLSENKSINLPGISIKLPSLSKKDKYDLIFACKNKIDYIAASFIRKKQDILEIKKFLEKHNGNDIKIIAKIENQEGLNNFDEILEVSDGIMVARGDLGVEIPVENVIFAQKMIIKKCNYFGKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESANGRYPLEAVSIMATICERTDITMTNRINFYDNTDMSITDAVCRSAVEIAEKLKAPLIIVATQLGKSAKSIRKYFPKAIILALTTNKKTVKQLILSKGVIPKLVDKISSTDDFYIIGKKVALASKYAIKGDVIVMVSGALVPSGTTNTTSVHII
SIO_010081: GJU04_RS01780
subclass of: SO_0000673
so part of: GJU04_RS01780
location: complement(356799..358208)
location: region:356799-358208:-1
so has part: feature:356799-358208:-1:exon

WP_168893178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356799-358208:-1:exon

GJU04_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: sufE
locus tag: GJU04_RS01785
old locus tag: GJU04_01780
so part of: sequence
location: complement(358283..358708)
location: region:358283-358708:-1
so has part: feature:358283-358708:-1:exon
subclass of: SO_0000010

position:358283:-1
position: 358283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358708:-1
position: 358708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358283-358708:-1:exon

GJU04_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: sufE
locus tag: GJU04_RS01785
old locus tag: GJU04_01780
inference: COORDINATES: protein motif:HMM:NF006792.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfuration protein SufE
translation: MSYTLPCINEIKNNFISCNNWEEKYLYIIELGNQIPILSEKEYSSENFIPGCQSRVWISMKIISNNYIQFKGDSDSSIVKGLLTIIFIFYNRKTYNEIISFDIKSCFQQLNFNRYLTYSRIQGINIIIKTIKKKLKNLIIN
SIO_010081: GJU04_RS01785
subclass of: SO_0000673
so part of: GJU04_RS01785
location: complement(358283..358708)
location: region:358283-358708:-1
so has part: feature:358283-358708:-1:exon

WP_168893179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358283-358708:-1:exon

GJU04_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01790
old locus tag: GJU04_01785
so part of: sequence
location: complement(358711..359943)
location: region:358711-359943:-1
so has part: feature:358711-359943:-1:exon
subclass of: SO_0000010

position:358711:-1
position: 358711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359943:-1
position: 359943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358711-359943:-1:exon

GJU04_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01790
old locus tag: GJU04_01785
EC number: 2.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010670036.1
GO function: GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SufS family cysteine desulfurase
translation: MSFNIKIIRKQFPILLNKINGKNFVYLDNAATVHKPKKVISALNNFYKNEYSSVNRGIYSLSVKATNKMENIRYKISKFINAKYTEEIIFTKSTTESINLIANTWGLNNILSYNNIIISEMEHHSNIIPWKILSEKIGFNIRIIPLNKNGDLELNKINNLIDKNTCLISITYISNILGTINPIDNIIKLAKKKKIITLIDGAQAIANKKIDVQDLNCDFFVFSGHKIFGPTGIGILYGKKKILESMPPWQGGGGMIMDIYKNKFIWEKIPWKFEAGSPNIAGIIGLGMAISWFMSFNIKDIINHNRFLTKYTLEKLNNISNIKIFGKKKFNKNRVGIISFNLGKHHSYDVGSFLDQYGIAIRTGHHCSIPVMKYFNVQSMCRISFSIYNNTNDINFFIEKLIYINNLLSK
SIO_010081: GJU04_RS01790
subclass of: SO_0000673
so part of: GJU04_RS01790
location: complement(358711..359943)
location: region:358711-359943:-1
so has part: feature:358711-359943:-1:exon

WP_168893180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358711-359943:-1:exon

GJU04_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01795
old locus tag: GJU04_01790
so part of: sequence
location: complement(359933..361213)
location: region:359933-361213:-1
so has part: feature:359933-361213:-1:exon
subclass of: SO_0000010

position:359933:-1
position: 359933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361213:-1
position: 361213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359933-361213:-1:exon

GJU04_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01795
old locus tag: GJU04_01790
inference: COORDINATES: protein motif:HMM:NF013614.2
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SufD family Fe-S cluster assembly protein
translation: MKNNIYKQIKNIYKLHKKCHFSKKSEFNWLKLENILKNKLYDNNKKNFLKYINNNLLINNQNLLININKLKKFLFKIDAIIICFINGKINKNISNINNLYYNINIKKYNTCNFKDINSQQNIYTYLSESLTKEIVTIHIHDKKKINIMPLYLVYFNINNEKNKIFMSNYRNYIYLNNKHPLIFIEHHININQLYLNNIYNTLILNNDSQLEYYKFITNENKNKNYCIINNEFYIHNNVFFKKHDFLMSNKNIEQNNNFKFIGKKSKLIYKSISLAKNNNFINLNNYVEHNRQNCCSIQIHKAITLDNSIINSIGLLKINKNAIKTDGQINYSSLLLSKSSKINIQPRLDILNHDVKCTHSVFTGKLDYNQIFFLRMRGISFKKAYNILLISFILDSLKEIKNNDLKKKILKKILFYLSIENFFHEF
SIO_010081: GJU04_RS01795
subclass of: SO_0000673
so part of: GJU04_RS01795
location: complement(359933..361213)
location: region:359933-361213:-1
so has part: feature:359933-361213:-1:exon

WP_168893181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359933-361213:-1:exon

GJU04_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: sufC
locus tag: GJU04_RS01800
old locus tag: GJU04_01795
so part of: sequence
location: complement(361203..361946)
location: region:361203-361946:-1
so has part: feature:361203-361946:-1:exon
subclass of: SO_0000010

position:361203:-1
position: 361203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361946:-1
position: 361946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361203-361946:-1:exon

GJU04_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: sufC
locus tag: GJU04_RS01800
old locus tag: GJU04_01795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002443201.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly ATPase SufC
translation: MLKINNLQVHINNKIILNKFNLNINSGEIHAIMGPNGSGKSTLSYVLSGKKEYIISKGEIFYKNENLLCMKPEIRARKGIFVSFQYLIEIPGVSNNIFLYNSLKAIKKYKEKKQIDRFTYNKIINEKIKILGKSKDFLQRSVNVGFSGGEKKINDIFHMLVLEPDLCILDEIDSGLDIDALKLVCKIINIMKNSNRSFLIITHYRRILEYINPDYIHILYNKKIIKSGNCNIISHIEKHGYGYFNEK
SIO_010081: GJU04_RS01800
subclass of: SO_0000673
so part of: GJU04_RS01800
location: complement(361203..361946)
location: region:361203-361946:-1
so has part: feature:361203-361946:-1:exon

WP_168893182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361203-361946:-1:exon

GJU04_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: sufB
locus tag: GJU04_RS01805
old locus tag: GJU04_01800
so part of: sequence
location: complement(361959..363401)
location: region:361959-363401:-1
so has part: feature:361959-363401:-1:exon
subclass of: SO_0000010

position:361959:-1
position: 361959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363401:-1
position: 363401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361959-363401:-1:exon

GJU04_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: sufB
locus tag: GJU04_RS01805
old locus tag: GJU04_01800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004172582.1
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly protein SufB
translation: MNNNLKYFREKKRTYKEGFFTELKNEKFIPGINLDIIHKISKIRNEPKWMLNFRLQGYYSWIKQKEPHWLNGFYKKLNYQKYIYYSAPLYNLKIKNNIKNKYLTSEVKNTFNKLNVPINNNSNIAIDAIFDSVSVITTNQKKLLNQGIIFCSLNNAIKNYPELVKKYLGSVVPADDNFFAALNAAVASDGTFIYIPKNIRCPIDLSTYFRINQKNVGQFERTILIADENSYLNYIEGCSAPIRKNSQLHAAVVEVILHKNAQVNYSTVQNWFPGNIKDKGGILNFVTKRAICKGKNSKMSWTQSETGAAITWKYPSVILKGDNSIGEFFSVSLTNGYQQADTGTKMIHIGKNTKSKIISKSISTENSKNTYRGLVCINKTAENSRNFTQCDSILIGSKCSTHTYPVLNIANNTAQVEHEATTSKIEEEQIFFCLQRGLNMEDAISLIINGFCREVFIKFPLEFAIEAQKLLSLHLEDSIG
SIO_010081: GJU04_RS01805
subclass of: SO_0000673
so part of: GJU04_RS01805
location: complement(361959..363401)
location: region:361959-363401:-1
so has part: feature:361959-363401:-1:exon

WP_168893183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361959-363401:-1:exon

GJU04_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01810
old locus tag: GJU04_01805
so part of: sequence
location: complement(363417..363791)
location: region:363417-363791:-1
so has part: feature:363417-363791:-1:exon
subclass of: SO_0000010

position:363417:-1
position: 363417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363791:-1
position: 363791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363417-363791:-1:exon

GJU04_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01810
old locus tag: GJU04_01805
inference: COORDINATES: protein motif:HMM:TIGR00049.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster assembly accessory protein
translation: MIIKKNLVHFKCDIDFYEGLYITENAFLQINKIIKKYNDKGIKLFLKKSGCFGFKYKIFLVKDIPSNEILFKKNNIYIFVNKKDIIFIDGTIIDFKKNNFSQSFEFYNKKIKQFCGCKKSFNID
SIO_010081: GJU04_RS01810
subclass of: SO_0000673
so part of: GJU04_RS01810
location: complement(363417..363791)
location: region:363417-363791:-1
so has part: feature:363417-363791:-1:exon

WP_168893184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363417-363791:-1:exon

GJU04_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: murJ
locus tag: GJU04_RS01815
old locus tag: GJU04_01810
so part of: sequence
location: complement(363937..365481)
location: region:363937-365481:-1
so has part: feature:363937-365481:-1:exon
subclass of: SO_0000010

position:363937:-1
position: 363937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365481:-1
position: 365481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363937-365481:-1:exon

GJU04_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: murJ
locus tag: GJU04_RS01815
old locus tag: GJU04_01810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013508637.1
GO process: GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein biosynthesis integral membrane protein MurJ
translation: MNLLKSLTTVSIITLFSRLLGFIRDSLIAKVFGAGVYSDSFFIAFKLPNLLRRIFAEGAFSQAFTPILAEYKNKRSRKDTKNFIASTLGILIIILSIIVLLGIIFSSLIISIIAPGFVNTDFKLKLTSKILKMTFPYILLISLSSLASSILNIWKNFFVPAVTPILLNLSMILLIIIFPKMLKPSILILAWAVLIGGLLQIFYQLIYLKKINMLIFPHFKNFDKGVLRVFKKMGTAIIGVAATQISLLINSAFSSFLITGSITWIYYADRLMELPVGMFGIALTIVLLPALTDSFTQNNEKEYNQLMDIGLRLCFLLIIPSSLILGFLSKTLLISLFQYGAFTYFDVLMTQINIIIYSVGLIFLIIAKVLAIGFYARQDVKTPVKINIIVLIITQLFSPFFIFFLHHIGFPISICFAAFLNVILLFNKLIKKNIYKPEPGWFNFLFRISLVTFILSIILLFISHLISEKWLILSSFKIRIFFLLSICLIIFVLYMIILFLLGFRLKDFSLKKEK
SIO_010081: GJU04_RS01815
subclass of: SO_0000673
so part of: GJU04_RS01815
location: complement(363937..365481)
location: region:363937-365481:-1
so has part: feature:363937-365481:-1:exon

WP_168893185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363937-365481:-1:exon

GJU04_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ribA
locus tag: GJU04_RS01820
old locus tag: GJU04_01815
so part of: sequence
location: 365643..366236
location: region:365643-366236:1
so has part: feature:365643-366236:1:exon
subclass of: SO_0000010

position:365643:1
position: 365643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366236:1
position: 366236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365643-366236:1:exon

GJU04_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ribA
locus tag: GJU04_RS01820
old locus tag: GJU04_01815
EC number: 3.5.4.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001176294.1
GO function: GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP cyclohydrolase II
translation: MNIKEISRAKLPTKWGEFIIIGFEEINTGNHHIALVYGLKKIYKHSIILTRIHSECLTGDAFFSLRCDCGLQLQLALEKISKANCGILIYHRQEGRNIGLLNKIKAYNLQDHGLDTIEANLKLGFRADERNFISCINILKILGILNIKLLTNNPYKIKILKKKGINVIDRIPLIIDYNVYNYNYLNTKNIKLGHILN
SIO_010081: GJU04_RS01820
subclass of: SO_0000673
so part of: GJU04_RS01820
location: 365643..366236
location: region:365643-366236:1
so has part: feature:365643-366236:1:exon

WP_168893186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365643-366236:1:exon

GJU04_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: sbcB
locus tag: GJU04_RS01825
old locus tag: GJU04_01820
so part of: sequence
location: complement(366228..367652)
location: region:366228-367652:-1
so has part: feature:366228-367652:-1:exon
subclass of: SO_0000010

position:366228:-1
position: 366228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367652:-1
position: 367652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366228-367652:-1:exon

GJU04_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: sbcB
locus tag: GJU04_RS01825
old locus tag: GJU04_01820
EC number: 3.1.11.1
inference: COORDINATES: protein motif:HMM:NF008746.0
GO function: GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0008852 - exodeoxyribonuclease I activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease I
translation: MLKKKKLKFNFLFYDYETFGLNPKKDRIAQFACIRTDIDLNIIKEPTVIYCKLPSDYLPNPKSIIIHNISPSLVNLKGFKENKFANFINRIFSYPNTCILGYNNINFDDEFSKFLFYRNFYDSYSWFWKNNNSRWDIINLVRACYVLRPNGIFWPKINNIPIFNLEKIAILNNIIPYYKSHDALSDVYTTISITKLIKNKQPLLYKYFLKYRNKKVLIKIINLSKIQILIHISNIYKNKDNNINCITPLFWHPENKNILITFNLKKNVDNLLKILNNKNKINKEYVFLYMQYINFSKSPLLIPIKILKKTDIKRLKFNILLYIKNFLILKKNFLKIKNFIKLNLINFYKKYDNTNIYNVDEQLYKNFFPNEDLYKFKKINDKKYIYSNLNKLSFKDKRANILLFKYKARNFPSTLSKVEQKKWNIYQKNIFNKKFLDNYILKIKKFLQNELCEKKILVLKNLLKYAKKLYNTLI
SIO_010081: GJU04_RS01825
subclass of: SO_0000673
so part of: GJU04_RS01825
location: complement(366228..367652)
location: region:366228-367652:-1
so has part: feature:366228-367652:-1:exon

WP_168893187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366228-367652:-1:exon

GJU04_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01830
old locus tag: GJU04_01825
so part of: sequence
location: 367712..367796
location: region:367712-367796:1
so has part: feature:367712-367796:1:exon
subclass of: SO_0000663

position:367712:1
position: 367712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367796:1
position: 367796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367712-367796:1:exon

GJU04_RS01830
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2675779
locus tag: GJU04_RS01830
old locus tag: GJU04_01825
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:367746..367748,aa:Ser,seq:gga)
SIO_010081: GJU04_RS01830
subclass of: SO_0000673
so part of: GJU04_RS01830
location: 367712..367796
location: region:367712-367796:1
so has part: feature:367712-367796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367712-367796:1:exon

GJU04_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01835
old locus tag: GJU04_01830
so part of: sequence
location: 367844..368425
location: region:367844-368425:1
so has part: feature:367844-368425:1:exon
subclass of: SO_0000010

position:367844:1
position: 367844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368425:1
position: 368425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367844-368425:1:exon

GJU04_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01835
old locus tag: GJU04_01830
inference: COORDINATES: protein motif:HMM:NF020893.2
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DedA family protein
translation: MFNINITKIMNHYGYLIILLGSLIEWETLIIISGMLAHKKILFLHKIIIITITGSVISNQVLFFIGKKYSKKFLSFLKDHNFKIQKYHNLMINYPYIFIIITRFIYGFRLISPITMGITNISNIKFFLLNIIGAIIWTIFFTITGYFFGEIISNWIKDFSKIIKYFLYIVLLFIIIKIIIKIIKKLFFILNKK
SIO_010081: GJU04_RS01835
subclass of: SO_0000673
so part of: GJU04_RS01835
location: 367844..368425
location: region:367844-368425:1
so has part: feature:367844-368425:1:exon

WP_168893188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367844-368425:1:exon

GJU04_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01840
old locus tag: GJU04_01835
so part of: sequence
location: complement(368433..369899)
location: region:368433-369899:-1
so has part: feature:368433-369899:-1:exon
subclass of: SO_0000010

position:368433:-1
position: 368433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369899:-1
position: 369899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368433-369899:-1:exon

GJU04_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01840
old locus tag: GJU04_01835
EC number: 7.1.1.-
inference: COORDINATES: protein motif:HMM:TIGR01770.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit N
translation: MTKSLIPLITIITFLILLLIKISIKRNNLTSLIITIWGFILTIISIFYTKNNNFSINYLFLNDMYSNFYIIILICNNIITCLISYKWLSNLKYNKDEFYLLTIISTMGSIVLLNSNNFISMLVGIELISIPIFGLISYNINLKYSLEASIKYVILSTIASSFIILGISFIYLDNGNLNFTFLINHYLFYNKFLVNYLTTIGFCLILVSLSFKLSIVPFHLWTSDVYQGAPTSVTIFLTTFNKLSIFIFLVKFLIYFTQINNNEYFLYKILIILSILSIIFGNIMGVKTKNNIKRLLAYSSIAHIGYMLIILIYNQKNTIHILSLEMMVIYIIGYIVNNLVILGIISLFESFNFQEKNIDKLYYYRGLFWYDPMLAFIFTIMLFSLAGIPLTIGFISKFYLILLSIKMKIWYLTIIIILGSSVGLYYYLRIIISLYLIPSKVNRDWYISKIKNNNFYFFIKNLFLLLTIIIIILGIYPEFIIHYIKNLI
SIO_010081: GJU04_RS01840
subclass of: SO_0000673
so part of: GJU04_RS01840
location: complement(368433..369899)
location: region:368433-369899:-1
so has part: feature:368433-369899:-1:exon

WP_168893189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368433-369899:-1:exon

GJU04_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nuoM
locus tag: GJU04_RS01845
old locus tag: GJU04_01840
so part of: sequence
location: complement(369952..371472)
location: region:369952-371472:-1
so has part: feature:369952-371472:-1:exon
subclass of: SO_0000010

position:369952:-1
position: 369952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371472:-1
position: 371472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369952-371472:-1:exon

GJU04_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nuoM
locus tag: GJU04_RS01845
old locus tag: GJU04_01840
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit M
translation: MLLPWLILVPFISGLFCWQSEKINFKLPRWISLISISFIFLLSIFECITYKINYNTKTLFIYPVWISEFIFNWIPRFGINFHLAMDGLSLLMINLTGLLGLMAIICSWNEIKKWHGFFHLNLLWILSAVIGVFLSVDMFLFFLFWEIMLIPMYFLISLWGHKGKSGKSRIKAATKFFIYTQSSGLLMLCGILSLVFLNQKTTGILTFEYTSLLNNYVNLKTEFLLMLSFFIAFAVKMPILPFHGWLPEAHSQAPTAGSVDLAGILLKTAAYGLLRFTLPLFPISSLKFSFIAILLGMSGIFYGSLMACIQSDIKKIIAYTSISHMGFILMGIYSHNKLAYQGVIIQMISHGISAAAQFILCGQIYERLKTRNIKLMGGIWNKLNTLPGLFLFFSLASIGIPGTGNFIGEFLILLGTFHTYPICASIASFSLLFSSIYSLNMVQKIFYGPKTKINIIIKNMFLREKIIIFILLILLLILGFYPKIILNISYSTVNSIYNRIMLLNYI
SIO_010081: GJU04_RS01845
subclass of: SO_0000673
so part of: GJU04_RS01845
location: complement(369952..371472)
location: region:369952-371472:-1
so has part: feature:369952-371472:-1:exon

WP_168893190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369952-371472:-1:exon

GJU04_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nuoL
locus tag: GJU04_RS01850
old locus tag: GJU04_01845
so part of: sequence
location: complement(371528..373387)
location: region:371528-373387:-1
so has part: feature:371528-373387:-1:exon
subclass of: SO_0000010

position:371528:-1
position: 371528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373387:-1
position: 373387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371528-373387:-1:exon

GJU04_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nuoL
locus tag: GJU04_RS01850
old locus tag: GJU04_01845
EC number: 7.1.1.2
inference: COORDINATES: protein motif:HMM:TIGR01974.1
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit L
translation: MKFLFLIILMPLVSFLILSLFSNYLNKTQISIIGVSFVGISAILTLIIGFIFIKNNILLYQQTLWKILNIDYLYIDFSLYLDKLSLIMLLLITWVGFIIHIFSIWYMENKEGYSRFFAYTNLFISNMILLILANNFILMFFGWEGVGVCSYLLIGFFNKKSKNGLSAIKAFLITRFSDIFLIIGIFFIFKVFNTLSFSKISYLITSSPIYYKAYYLKIISIMLIIGSLGKSAQFPLNTWLIDAMVGPTPVSSMIHAATMVTAGVYLILRNNILFLMNNNILFLTSIIGSITLLLSGWSALTQNNIKRILAYSTMSQLGYMFLALGIHSFHAALFHIIAHAFFKALLFLCVASIITSCNNQQNIFKMGGIKKYFPFIYYCFLCGAISLASLPFITMSGFTKEKILYEILINNHIILFIIGIIGSFFTCLYTIRMIYIIFYGKNNILPIINNKFTHNFPLIVLSILSSHIGIKLLPIKNNILLPNKVLFNNNYYNHILEIISIIIFLISFILYIFYIKKNYLIKIIINYYYKFSFINNFFLHGCYIDFIYKKIFVNIFMKILLIIKNDPIAKFIDFLTIKMINKIGNILLLSQNGYIRWYISLIYLGIILIILYLIILINS
SIO_010081: GJU04_RS01850
subclass of: SO_0000673
so part of: GJU04_RS01850
location: complement(371528..373387)
location: region:371528-373387:-1
so has part: feature:371528-373387:-1:exon

WP_168893191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371528-373387:-1:exon

GJU04_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nuoK
locus tag: GJU04_RS01855
old locus tag: GJU04_01850
so part of: sequence
location: complement(373384..373686)
location: region:373384-373686:-1
so has part: feature:373384-373686:-1:exon
subclass of: SO_0000010

position:373384:-1
position: 373384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373686:-1
position: 373686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373384-373686:-1:exon

GJU04_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nuoK
locus tag: GJU04_RS01855
old locus tag: GJU04_01850
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1
GO function: GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoK
translation: MIPLYHVLIFIIVIFILALTGIIIRNNMLYILIFTEIMINSAALSCIISGNYWKQTEGEIMYIISISISAIETCINLILLIKLYHYKNNINIDSISEMNG
SIO_010081: GJU04_RS01855
subclass of: SO_0000673
so part of: GJU04_RS01855
location: complement(373384..373686)
location: region:373384-373686:-1
so has part: feature:373384-373686:-1:exon

WP_168893192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373384-373686:-1:exon

GJU04_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01860
old locus tag: GJU04_01855
so part of: sequence
location: complement(373730..374227)
location: region:373730-374227:-1
so has part: feature:373730-374227:-1:exon
subclass of: SO_0000010

position:373730:-1
position: 373730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374227:-1
position: 374227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373730-374227:-1:exon

GJU04_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01860
old locus tag: GJU04_01855
EC number: 1.6.5.9
inference: COORDINATES: protein motif:HMM:NF012709.2
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit J
translation: MEIIFYTLELISIIFIFLIIISINPIYSLLYFLISLISISCIFFILGDYFAGSLEIIIYTGAIVILFIFVLMFLDYKNIKLEEEKIFLKKIFFLFIMLFLTLVFFILIFFILKKTYNKKYIFMNFINIKDIGINLFTQYKIIVELISILLLSAIITVFHIGKTQE
SIO_010081: GJU04_RS01860
subclass of: SO_0000673
so part of: GJU04_RS01860
location: complement(373730..374227)
location: region:373730-374227:-1
so has part: feature:373730-374227:-1:exon

WP_168893193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373730-374227:-1:exon

GJU04_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nuoI
locus tag: GJU04_RS01865
old locus tag: GJU04_01860
so part of: sequence
location: complement(374255..374797)
location: region:374255-374797:-1
so has part: feature:374255-374797:-1:exon
subclass of: SO_0000010

position:374255:-1
position: 374255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374797:-1
position: 374797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374255-374797:-1:exon

GJU04_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nuoI
locus tag: GJU04_RS01865
old locus tag: GJU04_01860
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoI
translation: MKIKKFFKGLISQIRSIFLVWINLFKKRETIMYPEEKIYLPPRYRGRIILTSDVNNNERCVACNLCAVSCPVGCISLKKTVSKNGRSYPKFFRINISRCIFCGFCEESCPTGAIQLIPDFELCELNRKDLIYEKNDLLKNNQGKYTKYNFYDISGVNIKNNDNKKNKDLNIEVDIKNILP
SIO_010081: GJU04_RS01865
subclass of: SO_0000673
so part of: GJU04_RS01865
location: complement(374255..374797)
location: region:374255-374797:-1
so has part: feature:374255-374797:-1:exon

WP_168893194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374255-374797:-1:exon

GJU04_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nuoH
locus tag: GJU04_RS01870
old locus tag: GJU04_01865
so part of: sequence
location: complement(374814..375788)
location: region:374814-375788:-1
so has part: feature:374814-375788:-1:exon
subclass of: SO_0000010

position:374814:-1
position: 374814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375788:-1
position: 375788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374814-375788:-1:exon

GJU04_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nuoH
locus tag: GJU04_RS01870
old locus tag: GJU04_01865
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010895978.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoH
translation: MILFSFFNNIELRFLLKIIFILLLLIISGAFLSFAERRILALFQNRYGPNRVGLYGCLQILADMIKIFFKEDWTPNFSNKLLFNISPIIAFNTLLSVFATLPITPKLMISNLDIGILFFFMMASLSIYSILFAGWASNNKYALLGTIRGVAQIISYEIFLGLSLMGIVCQTGSFNLYDIVYYQYKYCWNIIPQFFGFIPFFISSIALCHRYPFDQPETEQELIDGYHIEYSGMKFGLFFIGEYINIIVVSSLIVILFFGGWLGPFFPPIIWYLGKTFIFILLFFLIRASLPRPRYDKVMYFSWFTCLPLTLINLVITAFFVILK
SIO_010081: GJU04_RS01870
subclass of: SO_0000673
so part of: GJU04_RS01870
location: complement(374814..375788)
location: region:374814-375788:-1
so has part: feature:374814-375788:-1:exon

WP_168893195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374814-375788:-1:exon

GJU04_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nuoG
locus tag: GJU04_RS01875
old locus tag: GJU04_01870
so part of: sequence
location: complement(375785..378508)
location: region:375785-378508:-1
so has part: feature:375785-378508:-1:exon
subclass of: SO_0000010

position:375785:-1
position: 375785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378508:-1
position: 378508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375785-378508:-1:exon

GJU04_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nuoG
locus tag: GJU04_RS01875
old locus tag: GJU04_01870
EC number: 7.1.1.-
inference: COORDINATES: protein motif:HMM:TIGR01973.1
GO function: GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
GO process: GO:0006120 - mitochondrial electron transport, NADH to ubiquinone [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoG
translation: MININIEGKFYKVNEKDNLLKICLSLGFNVPYFCWHPILGSIGSCRQCAIKQYDNMKKNGQIIMSCMSSPIKQLYISINDQDSINFRKKNIELLMLNHPHDCPICDEGGSCHLQDMTVMTEHYIRRYKFSKRKYKNQYLGPFISHTMNRCITCYRCLRFYKNYADGKDFNVFGSKNNIYFGRYLDGILESPFSGNLIEICPTGVFTDKTYNINYSRKWDLQYAPSICQNCSLGCNIFVGERYGQLSSIQNRFHEKINHYFLCDKGYFGYGYTFLKSNPIKIIYYKDNKKLILNNKKIIKKITNLILKSKKIIGIGSPRASIESNVILKKLVGKNNFYLGILENEKKQINNIIKIIQNKNIYFPTLSEIEDYDAILILGEDLTNTNPRAALAVRQAIKNNFNFKKYKNIPYWHADAILNFKNKFFNPLFITSNDKTLLDDISSWNYYAPTLDQSEFGFILANYIENKNINSNLNNKNLKNQILKIKETLLNAKKPLIISGTGSSSIELISASYAIAKALNKKKKNIGLFYVLNKVNSMGIGLIKGKSLHDLFLKNKFNNYIDIDTIIIMENDLYFYEEKNKLNNFFKNIPNIIVLDHILTKTMRQANIILPVSNFLESSGTVINNECRAQRFFQVYKPSFYNKKNNRKSSWQWIYQIYAQLNNLNKKITLDEIIKKCEEYIPILNGIHLASYYSNYKVYNRKFARSSIRLSGRTSILSNINVHEPKQPEDKDTIFNFSMEGNYNSNINCTQIPFLWSPGWNSSQALHKFQKEIGISSKYGSTGFKISQKKTCKINFKKKNYDNKFIISNKLIIISHYTLFNSNSLVQKSSLIQKYFPNHYVFLNKKDADKLGILTNNLVELHCLNNVFILKVCISEFLHQGLISMPLGAKEISLSFLGKTIEKIKVLK
SIO_010081: GJU04_RS01875
subclass of: SO_0000673
so part of: GJU04_RS01875
location: complement(375785..378508)
location: region:375785-378508:-1
so has part: feature:375785-378508:-1:exon

WP_168893196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375785-378508:-1:exon

GJU04_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nuoF
locus tag: GJU04_RS01880
old locus tag: GJU04_01875
so part of: sequence
location: complement(378591..379871)
location: region:378591-379871:-1
so has part: feature:378591-379871:-1:exon
subclass of: SO_0000010

position:378591:-1
position: 378591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379871:-1
position: 379871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378591-379871:-1:exon

GJU04_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nuoF
locus tag: GJU04_RS01880
old locus tag: GJU04_01875
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002463450.1
GO function: GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoF
translation: MKIINPNPETHPLTWRIKKNKTIFLKEYIKKNGYQILKNSLLKHSPQDIINIVKQSKLKGRGGGGFYTGLKWSLIPQKKNDKEIRYFLCNADEMEPGTYKDRFLMEHIPHQLIEGIIISAFAIQANKGYIFLRGEYINCAKILNIAIKEAYNLKFLGNNILNSDFNFDLYLHIGAGRYICGEETALINSLEGKRANPRFKPPYPAAVGLWGKPTCINNVETIFNIPSIIQYGPLWYKNISKSIYDNGTKILGFSGNVKKPGLWELPFGITAREILEKYAGGMKKKFIFKAWQPGGAGTGFLTKNHLDLPMDFISISKAGSRLGTGISMAIDHTINMVSLVKNLEIFFARESCGFCTPCREGLPWIVKILNNLEKKKGNKKDIYLLKDISQQLTNGGSFCAHAPGAMEPLNSALKYFLHEFEYGIIN
SIO_010081: GJU04_RS01880
subclass of: SO_0000673
so part of: GJU04_RS01880
location: complement(378591..379871)
location: region:378591-379871:-1
so has part: feature:378591-379871:-1:exon

WP_168893197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378591-379871:-1:exon

GJU04_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nuoE
locus tag: GJU04_RS01885
old locus tag: GJU04_01880
so part of: sequence
location: complement(379819..380367)
location: region:379819-380367:-1
so has part: feature:379819-380367:-1:exon
subclass of: SO_0000010

position:379819:-1
position: 379819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380367:-1
position: 380367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379819-380367:-1:exon

GJU04_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nuoE
locus tag: GJU04_RS01885
old locus tag: GJU04_01880
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516802.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoE
translation: MNKKITNNINIFLSKKELKIIDKIKSHYESNNAAIIEILIFFQKKYGWISNNNIIIISNLLDVNPSEVDSIATFYSQIFRSPVGKYVIKYCDSVVCYITKYNKILKYIQKKLNIKPGQTTSNKLFTLIPICCLGHCENSPVIMINEKIYTSLSINYINQILDNYINENNKSQSRNTSSNMAY
SIO_010081: GJU04_RS01885
subclass of: SO_0000673
so part of: GJU04_RS01885
location: complement(379819..380367)
location: region:379819-380367:-1
so has part: feature:379819-380367:-1:exon

WP_168893198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379819-380367:-1:exon

GJU04_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nuoC
locus tag: GJU04_RS01890
old locus tag: GJU04_01885
so part of: sequence
location: complement(380381..382207)
location: region:380381-382207:-1
so has part: feature:380381-382207:-1:exon
subclass of: SO_0000010

position:380381:-1
position: 380381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382207:-1
position: 382207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380381-382207:-1:exon

GJU04_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nuoC
locus tag: GJU04_RS01890
old locus tag: GJU04_01885
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004960542.1
GO component: GO:0030964 - NADH dehydrogenase complex [Evidence IEA]
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit C/D
translation: MNNFFDNIVKKIGDAHNKFFYKKNIEPIINELNKKFNFEDFIIQNNFTNKMPLTIWIRPKDLIKFIKFFSKIDNPYNMLYDMHGIDERLHFNKFNLMKKMDFSLFYYLISINRNSDIIIKIPLKENDLNINTITNFFKNANWYEREIWEMFGINFLNHPNLSHILLPKNWNYGFPLRKDFPSRATECTPYFLTKEKYKKDIESTKFNPENYNFSINNKLNNYMYLNLGPNHPSVHGAFRIILQLSGEEIVQCIPEIGFHHRGAEKIAERQTWHTYIPYTDRIEYLGGCINEMPYILAIEKLANISVTDRIKVIRIMLSELFRINSHLLCLSTFMQDLGIMTPIFLVFTDRQKIYDIIEAITGARMHPAWFRIGGLAQDLPNGWDILVKRLLNWLPKRLNMYKKVALENSILISRSKNIASYNRKEAISWGITGTGLRATGLNFDIRKWRPYSGYENFDFDIPIGQYNISDSYSRILLKFEEIWQSLHIIKQCLNNMPSGQYKVDHPLTTPPPRERMLNNIENLIHHFVQVSWGPLIPANESFQMIEATKGINSYYLISDGNTISYRTRIRTPSFAHLQQIPSVIQGNLISDLITYLGSIDFVMSDVDR
SIO_010081: GJU04_RS01890
subclass of: SO_0000673
so part of: GJU04_RS01890
location: complement(380381..382207)
location: region:380381-382207:-1
so has part: feature:380381-382207:-1:exon

WP_168893199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380381-382207:-1:exon

GJU04_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01895
old locus tag: GJU04_01890
so part of: sequence
location: complement(382234..382896)
location: region:382234-382896:-1
so has part: feature:382234-382896:-1:exon
subclass of: SO_0000010

position:382234:-1
position: 382234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382896:-1
position: 382896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382234-382896:-1:exon

GJU04_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01895
old locus tag: GJU04_01890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017490251.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit B
translation: MKYILNKIKNNKKNYPLESKKNIDTDPLTDQISKNIFLGNLKKITHKIINWGRKNSLWPYNFGLSCCYVEMTTSFTSINDISRFGSEVLRASPRQADFMVIAGTCFLKMAPIIQRLYDQMLEPKWVISMGSCANSGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPESYIQALLLLQKSINYERRPLSWVIGDQGIYKAKLKSSNKFFNDKNFKFKSIKNI
SIO_010081: GJU04_RS01895
subclass of: SO_0000673
so part of: GJU04_RS01895
location: complement(382234..382896)
location: region:382234-382896:-1
so has part: feature:382234-382896:-1:exon

WP_168893200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382234-382896:-1:exon

GJU04_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ndhC
locus tag: GJU04_RS01900
old locus tag: GJU04_01895
so part of: sequence
location: complement(382924..383307)
location: region:382924-383307:-1
so has part: feature:382924-383307:-1:exon
subclass of: SO_0000010

position:382924:-1
position: 382924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383307:-1
position: 383307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382924-383307:-1:exon

GJU04_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ndhC
locus tag: GJU04_RS01900
old locus tag: GJU04_01895
EC number: 1.6.5.9
inference: COORDINATES: protein motif:HMM:NF012717.2
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit A
translation: MIINKLIYNPQYFILFQVFAITISCLVILISFFLGGRSYGIDKQIPFESGVCSYDLSPIKIHINFYLIAIFFIIFDIESLYLYLWALTIKVIKLEGFIEGILFIFTILITLFYLFKTKALHWQYKNH
SIO_010081: GJU04_RS01900
subclass of: SO_0000673
so part of: GJU04_RS01900
location: complement(382924..383307)
location: region:382924-383307:-1
so has part: feature:382924-383307:-1:exon

WP_168893201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382924-383307:-1:exon

GJU04_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: thrC
locus tag: GJU04_RS01905
old locus tag: GJU04_01900
so part of: sequence
location: complement(383328..384629)
location: region:383328-384629:-1
so has part: feature:383328-384629:-1:exon
subclass of: SO_0000010

position:383328:-1
position: 383328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384629:-1
position: 384629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383328-384629:-1:exon

GJU04_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: thrC
locus tag: GJU04_RS01905
old locus tag: GJU04_01900
EC number: 4.2.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007373065.1
GO function: GO:0004795 - threonine synthase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine synthase
translation: MKFYNLNSQKENINFCQALKKGLGKNQGLFFPGELPKLNHKIINKILNLNFIEKSSYIISLFLDEKEISWGNLKLQVAKAFNFPLLLNLIDKNIACLELFHGPTLAFKDFGVRFMAQMLNFFDNKKIIILTATSGDTGAAVAHAFHKMKNIEVVILYPYKKISILQEKLFCTLGNNITTIAIKGNFDDCQKLIKKIFNDKELSNILNLNSANSINISRLIAQICYYFEAFTQIPLNKRKKKIVFSVPSGNFGNLTAGLIAKTMGLPIYKFIIATNINDTIPRFLNKGYWKPKKTIATLSNAMDVSIPNNWPRIIEIFNKNNWDLNKLESFAITDKQTTKTTINFFKKYKYILEPHSSVSFCALKKQILKEDTFNIFLGTAHPAKFQNYIYNTLHQKILLPKILIDCIEKKNLSHILSNDFNHLKNFLIKNYVI
SIO_010081: GJU04_RS01905
subclass of: SO_0000673
so part of: GJU04_RS01905
location: complement(383328..384629)
location: region:383328-384629:-1
so has part: feature:383328-384629:-1:exon

WP_168893202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383328-384629:-1:exon

GJU04_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: thrB
locus tag: GJU04_RS01910
old locus tag: GJU04_01905
so part of: sequence
location: complement(384626..385567)
location: region:384626-385567:-1
so has part: feature:384626-385567:-1:exon
subclass of: SO_0000010

position:384626:-1
position: 384626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385567:-1
position: 385567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384626-385567:-1:exon

GJU04_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: thrB
locus tag: GJU04_RS01910
old locus tag: GJU04_01905
EC number: 2.7.1.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017373944.1
GO function: GO:0004413 - homoserine kinase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine kinase
translation: MIKIYSPASIGNINVGFDTLGIALSRVDKGILGDLITISSSNKFILINKGIFINDLPKNNYENIIFHCWTKFCDKVGKKIPLKIILEKNVPVASGLGSSACSIVAFLKAINLFYHNPLNNIDLLKLMGELEGFLSGNIHYDNIVPCLLGGMKLILIDNKNNLIIQNIPIFKNWFWVIAYPGIKLSTFCSRKILPKLYKKEILIKQNQYLAGFINASHTKQELLASQLMKDFIAEPYRKSLIPNFEKISYTAKKLGALSYGISGSGPTIFSIFNNLNYAHNMAIWLKKNYLKNNTGFVYICKINNIGTQIMEKK
SIO_010081: GJU04_RS01910
subclass of: SO_0000673
so part of: GJU04_RS01910
location: complement(384626..385567)
location: region:384626-385567:-1
so has part: feature:384626-385567:-1:exon

WP_168893203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384626-385567:-1:exon

GJU04_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: thrA
locus tag: GJU04_RS01915
old locus tag: GJU04_01910
so part of: sequence
location: complement(385592..388045)
location: region:385592-388045:-1
so has part: feature:385592-388045:-1:exon
subclass of: SO_0000010

position:385592:-1
position: 385592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388045:-1
position: 388045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385592-388045:-1:exon

GJU04_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: thrA
locus tag: GJU04_RS01915
old locus tag: GJU04_01910
EC number: 1.1.1.3
EC number: 2.7.2.4
inference: COORDINATES: protein motif:HMM:NF006959.0
GO function: GO:0004072 - aspartate kinase activity [Evidence IEA]; GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO process: GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009067 - aspartate family amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional aspartate kinase/homoserine dehydrogenase I
translation: MRVLKFGGTSLKNAERFLLVTNIIKRIYLKNEKIAVVLSAPANITNILEKMIEKSIKEKNYKQDIIYLKDFFIKIVNNFKENIKNLDINIINNKINKIINKIEKLLNGINLINYCPDIIKAKILSQGEKFSIILLEYLLTIKKYRIFIISPKKYLLAYGNYLESTVDINLTSKNIQNINLTNIDIMLMPGFSAVNKKKQTVLLGRNGSDYSAAILAVCLKAKCCEIWTDVDGIYTADPNIIPNTQLLKFISYKEAIALAYFGAKVIHYKTLAPILKKNIPCIIKNIVNLNSDGTIINNFNIKNHILPKIKGVTELKNISILNIYGDKNKQIKSIISRILFFVFNLKISIYFITQSSEDCNINILLSNKNLNKLKNLLEDEFYLELKYNLIKSIKIIKNLSLITLVNNNINHSTNIISKFLNIFKITNINIFAISQNIFQNYISVAIKEKYAKNIIEITHKILFHKEKILEIFIIGTGSIGSTLLKQIYQNKCYFKNKNIFLKICSIINTKNFLFNFNGLNIENWKKEIKNNTYDNIIKKLLKKSKTYKFINPVIIDCTSSQEVADQYINFLYHGFNIIATNKKANSTTIEYYNQIRFTASKLNLKFYYETNVGAGLPVINTLQNILKTGDKIINFIGILSGSLSFIFGKLEEGVTLSQSIIMAQKMGFTEPDPRTDLTGIDVARKLLILAREIGFNIELNDIIIESIIPDKFNKQKSLTKFFNSLAEIDKIYIKKIKEAREDNKVLRYIGSINSQGVCKVKIIKINNNHPFFEIKNGENSFAFYTNYYKPYPLVLRGYGAGNNVTAAGVLIDLLRLI
SIO_010081: GJU04_RS01915
subclass of: SO_0000673
so part of: GJU04_RS01915
location: complement(385592..388045)
location: region:385592-388045:-1
so has part: feature:385592-388045:-1:exon

WP_168893204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385592-388045:-1:exon

GJU04_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: parC
locus tag: GJU04_RS01920
old locus tag: GJU04_01915
so part of: sequence
location: complement(388346..390589)
location: region:388346-390589:-1
so has part: feature:388346-390589:-1:exon
subclass of: SO_0000010

position:388346:-1
position: 388346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390589:-1
position: 390589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388346-390589:-1:exon

GJU04_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: parC
locus tag: GJU04_RS01920
old locus tag: GJU04_01915
EC number: 5.6.2.2
inference: COORDINATES: protein motif:HMM:TIGR01062.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit A
translation: MNKAIQKNLIESIQLDKFAEHAYLNYSIYVISDRALPHIGDGLKPVQRRIIYAMAQLGLKSICKFKKSARTIGDVIGKYHPHGDVACYEAMVLMAQSFSYRYPLIEGQGNWGSQDDPKSFAAMRYTEARLSKYSDILLGEVEKGTVRFIPNFDGTLFEPKILPACLPNIILNGSTGIAVGMSTDIPPHNIKEISNAIIKLIDYPKIKLNEILNIIQGPDFPTGSEIITPKDEIYKIYEKGKGSIKLRASWQIKDNKVIITSLPYQISGIRIIEQITTQIRNKKLPMIDEIRDESDYENPTRIVIVIRSNFNYLKIEQIMYHLFFLTDLEKSYRINLNMIGLNNKPAVKNLIEILSEWIIFRRKIVQKRLNFNLKKIHRRLHIITGLLIVYSNLEEFIKIIRLNPNPDFIFKKKFNLTDIQIETLLNFKLRSLSFIEKKKLIDEKKKLEIEYKNIEKILFSKENMNLLLKKEILLAANNYGNTRRSILKKRKEAKLLNESELILNEPITIILSKMGWIRCAKGHTIDPLNLNYKSGDSFLLSVKGKKNQTIVVLDSKGRSYSIDPFSLPAARSSGEPLNGKINISQGSIIKSLLMEPNNKEIILSANSGYGFICKFHDLIACNRNGKLSIILSENAEILPPLVIQNENNKILVISYLNKFLLFSISEIPRLSRGRGNRLIFIKNKDFIQKKDKLKWIFLINKNSVIYIKTKSEIFKLDYKKLKIFLSVKGEKGFFYKNFKNIKDIIIK
SIO_010081: GJU04_RS01920
subclass of: SO_0000673
so part of: GJU04_RS01920
location: complement(388346..390589)
location: region:388346-390589:-1
so has part: feature:388346-390589:-1:exon

WP_168893205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388346-390589:-1:exon

GJU04_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01925
old locus tag: GJU04_01920
so part of: sequence
location: 390773..391831
location: region:390773-391831:1
so has part: feature:390773-391831:1:exon
subclass of: SO_0000010

position:390773:1
position: 390773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391831:1
position: 391831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390773-391831:1:exon

GJU04_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01925
old locus tag: GJU04_01920
EC number: 2.5.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013026889.1
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase
translation: MQNIYFKNKRYLITPNELRKKLPLSQEKKEQILNSRKIISNIISGKDHRLLIICGPCSIHNIDEAIEYSKFLKQMFSKINNNIYLVMRVYFEKPRTILGWKGLINDPYMDHSFNINKGIYLARKLLIKLVQNNIPLATEILDPNTLGYLDDLLSWIAIGARTVESQIHREIASLVKIPVGFKNNINGNIFSAINAIQASAIEHHFISLDNNGKICIIDTKGNKNCHLILRGGQKPNYDKSNILECEKALLKVNLKPKIMIDCSHGNSNKDFKKQILVIQSIISQIKEGNNSIIGIMLESYIKEGNQILNIQNYKKLKYGISITDGCINLQTTKNILYKINTELDLILKQRLL
SIO_010081: GJU04_RS01925
subclass of: SO_0000673
so part of: GJU04_RS01925
location: 390773..391831
location: region:390773-391831:1
so has part: feature:390773-391831:1:exon

WP_168893206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390773-391831:1:exon

GJU04_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: tyrA
locus tag: GJU04_RS01930
old locus tag: GJU04_01925
so part of: sequence
location: 391864..392946
location: region:391864-392946:1
so has part: feature:391864-392946:1:exon
subclass of: SO_0000010

position:391864:1
position: 391864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392946:1
position: 392946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391864-392946:1:exon

GJU04_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: tyrA
locus tag: GJU04_RS01930
old locus tag: GJU04_01925
EC number: 1.3.1.12
EC number: 5.4.99.5
inference: COORDINATES: protein motif:HMM:NF008400.0
GO function: GO:0004106 - chorismate mutase activity [Evidence IEA]; GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0046417 - chorismate metabolic process [Evidence IEA]; GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional chorismate mutase/prephenate dehydrogenase
translation: MLNKLNLLRNEIDILDLKLLNIISERLKLVKQIGLIKNKHGLPLYVPERERYIINLKKKEAKKKGMSPNFIEDIFYRIINESYSYEKIKIFKKIKPNFSKILIISHHKKISILFKKMLTITEYNVNYIEEKKINIDNITSLFENIGMIILDISKFFFKKLIKKLCLLPKNCILVDLSPIKEIFMTKILKIYKGPVLGLYYLFNYQENYLFKETIIYCYGRKEKYYSWFLKQIETWGLQIKHMNIIEHDKYIFFIESLKYFFTLIYGIFLKKTKISLNEVCILSKPIYYLNSLILKNFFSTNPKLYFYLIENSQNNTKKVKKYLDYINNLVILIDKDKKMKIIDIFNKIKKLLITNIEILR
SIO_010081: GJU04_RS01930
subclass of: SO_0000673
so part of: GJU04_RS01930
location: 391864..392946
location: region:391864-392946:1
so has part: feature:391864-392946:1:exon

WP_168893207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391864-392946:1:exon

GJU04_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: bamD
locus tag: GJU04_RS01935
old locus tag: GJU04_01930
so part of: sequence
location: complement(392992..393711)
location: region:392992-393711:-1
so has part: feature:392992-393711:-1:exon
subclass of: SO_0000010

position:392992:-1
position: 392992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393711:-1
position: 393711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392992-393711:-1:exon

GJU04_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: bamD
locus tag: GJU04_RS01935
old locus tag: GJU04_01930
inference: COORDINATES: protein motif:HMM:TIGR03302.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0065003 - protein-containing complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamD
translation: MKIFIKNKFFFINILICILLVFTTNCEYHSILKKKNLNISLKHGYLEAIKTLTHKEYDKALIKFSNLYVNYPYNMYTEKILVYLIYLNYLHKDFLNVLELSEEFMESYNISAFISYVFYVRILSEISLDSNNLIQNFFKINRNDCNPFYTQLAIHDTKIFIKNFPKNIYTNILKKKLIHMEKRIQFFDLNIINFFFKKKNYIATINRCLIFLKKYSSSKNIYFVRKILKDSYNKMLLKK
SIO_010081: GJU04_RS01935
subclass of: SO_0000673
so part of: GJU04_RS01935
location: complement(392992..393711)
location: region:392992-393711:-1
so has part: feature:392992-393711:-1:exon

WP_168893208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392992-393711:-1:exon

GJU04_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01940
old locus tag: GJU04_01935
so part of: sequence
location: 393785..393964
location: region:393785-393964:1
so has part: feature:393785-393964:1:exon
subclass of: SO_0000010

position:393785:1
position: 393785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393964:1
position: 393964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393785-393964:1:exon

GJU04_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01940
old locus tag: GJU04_01935
inference: COORDINATES: protein motif:HMM:NF013633.2
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S4 domain-containing protein
translation: MKYINLTLKVCSIYNQQRLDVFLNKKIIQFSRSQIKKIIINNNVKINNNIINIPKKKFF
SIO_010081: GJU04_RS01940
subclass of: SO_0000673
so part of: GJU04_RS01940
location: 393785..393964
location: region:393785-393964:1
so has part: feature:393785-393964:1:exon

WP_168893209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393785-393964:1:exon

GJU04_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01945
old locus tag: GJU04_01940
so part of: sequence
location: 394009..394740
location: region:394009-394740:1
so has part: feature:394009-394740:1:exon
subclass of: SO_0000010

position:394009:1
position: 394009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394740:1
position: 394740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394009-394740:1:exon

GJU04_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01945
old locus tag: GJU04_01940
inference: COORDINATES: protein motif:HMM:TIGR00005.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MWKAQNLNLNIIYNDKYILVINKITNLVVHPGNKNENNTIFNSLLFYYPYLRDVPRAGIIHRLDKNTTGLMIIAKNMNSYMFLKKELKKHNIIREYEAIVNGIIKKNGIINYPIKRIYKKNHVYMKIHSLGKKAITKYFIKNIFRNHTYLRIRLKTGRTHQIRVHLSYIQNSIVGDPVYKQFKNNYIINKFYKNKINKIIQRQALHACYLKFKHPFYNIDIKLYSKLPNDINNLINFLKKDKI
SIO_010081: GJU04_RS01945
subclass of: SO_0000673
so part of: GJU04_RS01945
location: 394009..394740
location: region:394009-394740:1
so has part: feature:394009-394740:1:exon

WP_281351278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394009-394740:1:exon

GJU04_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01950
old locus tag: GJU04_01945
so part of: sequence
location: 394846..395523
location: region:394846-395523:1
so has part: feature:394846-395523:1:exon
subclass of: SO_0000010

position:394846:1
position: 394846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395523:1
position: 395523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394846-395523:1:exon

GJU04_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01950
old locus tag: GJU04_01945
inference: COORDINATES: protein motif:HMM:NF024853.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin domain-containing protein
translation: MINIKKYVLFFSMFFLLLITSSNCIASEKSSKISFYDVLTKEEQKLFIKEFGNKPVIVEFFSFLCPHCYELHKGTNQKILKNKRLKNVKIVKIHYNQVGQEDGLSTVLGYTWVVAKILNVEDKVIGPIFDGIHKNASIRDYKSIKKIFIKNTGMKGNMFDAAWNSNIAKILFEKQYDLVQKFGINVVPDIYINNKFIINLSELYSSDNYNFYQNYINLIKKLLKK
SIO_010081: GJU04_RS01950
subclass of: SO_0000673
so part of: GJU04_RS01950
location: 394846..395523
location: region:394846-395523:1
so has part: feature:394846-395523:1:exon

WP_168893210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394846-395523:1:exon

GJU04_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS01955
old locus tag: GJU04_01950
so part of: sequence
location: 395555..396430
location: region:395555-396430:1
so has part: feature:395555-396430:1:exon
subclass of: SO_0000010

position:395555:1
position: 395555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396430:1
position: 396430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395555-396430:1:exon

GJU04_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS01955
old locus tag: GJU04_01950
inference: COORDINATES: protein motif:HMM:NF014759.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'-3' exonuclease H3TH domain-containing protein
translation: MRKKIILIDGSFYLYRAYYSLPNLMNTKGYPTGAIYGFIRMFNKIIKMNTNSYFLIIFDTKGISFRKKIFDKYKSKRINMPDNLIIQIKPLFKIIQAMGYNVIYIKNIEADDIIGTLAIQAEKKKFLVFIFSIDKDITQLVNKNIKIVNPINYSISGPKEIYQKYGVYPRCISDLLALSGDPIDNIPGVPGIGNKISKNLINKLGNLKYIYNNINNINNTNFRSGDIIREKLIKYKKLVFLYHELTKIKTNIVINIDYLNPLNLKITPQINYLKYLFNKYEFNKLNKIIYN
SIO_010081: GJU04_RS01955
subclass of: SO_0000673
so part of: GJU04_RS01955
location: 395555..396430
location: region:395555-396430:1
so has part: feature:395555-396430:1:exon

WP_168893211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395555-396430:1:exon

GJU04_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: typA
locus tag: GJU04_RS01960
old locus tag: GJU04_01955
so part of: sequence
location: 396666..398504
location: region:396666-398504:1
so has part: feature:396666-398504:1:exon
subclass of: SO_0000010

position:396666:1
position: 396666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398504:1
position: 398504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396666-398504:1:exon

GJU04_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: typA
locus tag: GJU04_RS01960
old locus tag: GJU04_01955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091497.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translational GTPase TypA
translation: MKKIRNIAIVAHIDHGKTTLIDKLLQESDNFRNISIENNNINRIMDSNELEKEKGITIFSKNTSIFWKNYKINIIDTPGHADFGAEVERVLSMVDSVLLLVDAVEGPMPQTRFVTLKAFSYNLKPIVLINKIDRKFIRPDWVINQIFDLFVNLNASDEQLDFPIIYTSALKGTSGYNMNNIQHNMNVVYETIIKHVPEPQGDINEPFQMQISQIEYNNYIGNICIGLIKKGQIKKNKYVTIIKNNKIFKKIKILYIIFNIGLKPIYSDSAKCGDIVGIAGSGFEEISISDTICDINYNIPLPILKIEKPKISMLFHVNDSPFSGIEGKYITSNKIFNRIKKESLNDVALKIAETKNNNIFHVSGRGELHLVILIENMRKEGFELSVSKPQILSKIINNKKLEPFEILTLDFEQNKKGHIIQLISRRRAIINNIILDNDTNRIKIEAIISSKGLIGFRNEFINTTSGNGIMNSFFSHYDINKYHMIENRSNGVLISNKEGYAVAFALYNLQSRGKLLINPGEKVYEGQIIGIHNKSNDLIVNCLINKKLTNMRASGNDNPINLISVKKMSLEEAIDFINNDELVEITPKSIRIRKKYLKKSQRKFKKFKNIKK
SIO_010081: GJU04_RS01960
subclass of: SO_0000673
so part of: GJU04_RS01960
location: 396666..398504
location: region:396666-398504:1
so has part: feature:396666-398504:1:exon

WP_168893212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396666-398504:1:exon

GJU04_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ssrA
locus tag: GJU04_RS01965
old locus tag: GJU04_01960
so part of: sequence
location: complement(398506..398868)
location: region:398506-398868:-1
so has part: feature:398506-398868:-1:exon
subclass of: SO_0000659

position:398506:-1
position: 398506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398868:-1
position: 398868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398506-398868:-1:exon

GJU04_RS01965
type: Transfer Messenger RNA
subclass of: SO_0000584
RO_0002162: 2675779
gene: ssrA
locus tag: GJU04_RS01965
old locus tag: GJU04_01960
product: transfer-messenger RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00023
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: GJU04_RS01965
subclass of: SO_0000673
so part of: GJU04_RS01965
location: complement(398506..398868)
location: region:398506-398868:-1
so has part: feature:398506-398868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398506-398868:-1:exon

GJU04_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: smpB
locus tag: GJU04_RS01970
old locus tag: GJU04_01965
so part of: sequence
location: complement(398876..399316)
location: region:398876-399316:-1
so has part: feature:398876-399316:-1:exon
subclass of: SO_0000010

position:398876:-1
position: 398876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399316:-1
position: 399316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398876-399316:-1:exon

GJU04_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: smpB
locus tag: GJU04_RS01970
old locus tag: GJU04_01965
inference: COORDINATES: protein motif:HMM:NF003843.0
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SsrA-binding protein SmpB
translation: MIFNKKIFYNFFIKEKMNAGLVLEGWEVKSLRLNKVTIINSYISFVYNKVFVFNLNISPIITTCSHIKYDNNRKKQLLLKKKEIELLKNYINLKGFTVVVMGLFWKKSWCKLKIAIVKGKKKYDKRNILKNKEWNFNKLRFLKKNL
SIO_010081: GJU04_RS01970
subclass of: SO_0000673
so part of: GJU04_RS01970
location: complement(398876..399316)
location: region:398876-399316:-1
so has part: feature:398876-399316:-1:exon

WP_281351279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398876-399316:-1:exon

GJU04_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: grpE
locus tag: GJU04_RS01975
old locus tag: GJU04_01970
so part of: sequence
location: 399561..400226
location: region:399561-400226:1
so has part: feature:399561-400226:1:exon
subclass of: SO_0000010

position:399561:1
position: 399561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400226:1
position: 400226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399561-400226:1:exon

GJU04_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: grpE
locus tag: GJU04_RS01975
old locus tag: GJU04_01970
inference: COORDINATES: protein motif:HMM:NF010748.0
GO function: GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide exchange factor GrpE
translation: MKNNQSLNDIEKNNIEKKENNNKLNNLKKNNNIKNEESINKYKQKNTIEYFKEKNDSYKLEIIKFKTKLKKYKNDIWDLKLRSQAEIENIRHRSLLEIEKAYKFSLEKFINELLPVIDNLERAINLKIIQKNKINSSIIEGIKLTLKSLLILIKKFGVSIIDEINIPFDPSKHQAMSLIESDIIKENYIIEILQKGYFLNNRLLRPAMVIVSKIKKIEKHN
SIO_010081: GJU04_RS01975
subclass of: SO_0000673
so part of: GJU04_RS01975
location: 399561..400226
location: region:399561-400226:1
so has part: feature:399561-400226:1:exon

WP_168893213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399561-400226:1:exon

GJU04_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmB
locus tag: GJU04_RS01980
old locus tag: GJU04_01975
so part of: sequence
location: 400329..400553
location: region:400329-400553:1
so has part: feature:400329-400553:1:exon
subclass of: SO_0000010

position:400329:1
position: 400329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400553:1
position: 400553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400329-400553:1:exon

GJU04_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmB
locus tag: GJU04_RS01980
old locus tag: GJU04_01975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013087692.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L28
translation: MTKFCQITGKKTIKGNNRSHAMNATKRKFLPNIHYHKFWLEKEKRFITIRTSAKGIRLINKKGIENTFLYKKLR
SIO_010081: GJU04_RS01980
subclass of: SO_0000673
so part of: GJU04_RS01980
location: 400329..400553
location: region:400329-400553:1
so has part: feature:400329-400553:1:exon

WP_168893214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400329-400553:1:exon

GJU04_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmG
locus tag: GJU04_RS01985
old locus tag: GJU04_01980
so part of: sequence
location: 400558..400722
location: region:400558-400722:1
so has part: feature:400558-400722:1:exon
subclass of: SO_0000010

position:400558:1
position: 400558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400722:1
position: 400722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400558-400722:1:exon

GJU04_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmG
locus tag: GJU04_RS01985
old locus tag: GJU04_01980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MAKKTRVIIKLISSAKTGHFYTITKNKKNIKKLEIKKFDPYIRKHILYKEKKIK
SIO_010081: GJU04_RS01985
subclass of: SO_0000673
so part of: GJU04_RS01985
location: 400558..400722
location: region:400558-400722:1
so has part: feature:400558-400722:1:exon

WP_168893215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400558-400722:1:exon

GJU04_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmE
locus tag: GJU04_RS01990
old locus tag: GJU04_01985
so part of: sequence
location: complement(400815..401036)
location: region:400815-401036:-1
so has part: feature:400815-401036:-1:exon
subclass of: SO_0000010

position:400815:-1
position: 400815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401036:-1
position: 401036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400815-401036:-1:exon

GJU04_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmE
locus tag: GJU04_RS01990
old locus tag: GJU04_01985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012619590.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKKNIHPQYNKITMKCSCGNIINTRSTLKNNKEFNLDVCNLCHPFYTGKQKITDTKGRVEKFKKRFKNSKIFE
SIO_010081: GJU04_RS01990
subclass of: SO_0000673
so part of: GJU04_RS01990
location: complement(400815..401036)
location: region:400815-401036:-1
so has part: feature:400815-401036:-1:exon

WP_168893216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400815-401036:-1:exon

GJU04_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: priA
locus tag: GJU04_RS01995
old locus tag: GJU04_01990
so part of: sequence
location: 401135..403168
location: region:401135-403168:1
so has part: feature:401135-403168:1:exon
subclass of: SO_0000010

position:401135:1
position: 401135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403168:1
position: 403168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401135-403168:1:exon

GJU04_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: priA
locus tag: GJU04_RS01995
old locus tag: GJU04_01990
inference: COORDINATES: protein motif:HMM:TIGR00595.1
GO component: GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primosomal protein N'
translation: MKIIKVVFNNAIIYKKFDYLLSKNIPIYIGCRVIAPIKKKNYIGIVIKIQNNSKISIKKLKFLHKILDKTSLFNSLILKFASKVSKYYQFPIGLILFQILPIFLRKKNKYVLNLKNNLQFNKINMINNNKIIKLYNNKNKKKFIINNKKNNILNFFQKKYFQPNFFVWITQDNIIFLEKINIYLDLIKIILSQKKQILIIVPQEYNLLNLYQYFMSKLDILICLLYSNFSNKKILSIWENIKNGTISIIIGTKFTIFTQFLKLGLIILIEEHNFIYKKTNIFKYNIRDIAILRAKIENIPIILCSKTLSLETLYNINIGKFKLLFQNNKKILYKNFFKFKILDINKQILQLQLFSKILIKNIQVCIENNEQIIIYNNHQGYSKLVFCFFCKKPLKCINCNTNYIFYKKLWKLYCIYCKKNISMLDYCPLCKKNFFIPIGIGNEKLIEFLRKLFPNILLLNITNKNFIKKTLLIKNNKPAIIIASQILYKEYFSFLKNNLIIILNIDSVFFSKNFRAIEYFSQYIFNILNNHLDIKKKTIIIQTHYPQNKIIKKIFKKYNTYFDISNFLLKEREMMLLPPFTNHIILILESNDKKILLNFLNILKKKIIFKYINEKNFFIIGPLSLIQNKRKGLFRKQIILQHIFKKKLQIIIKYIISIFKKIINSNKIKLIINVDPT
SIO_010081: GJU04_RS01995
subclass of: SO_0000673
so part of: GJU04_RS01995
location: 401135..403168
location: region:401135-403168:1
so has part: feature:401135-403168:1:exon

WP_168893217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401135-403168:1:exon

GJU04_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mnmG
locus tag: GJU04_RS02000
old locus tag: GJU04_01995
so part of: sequence
location: 403228..405111
location: region:403228-405111:1
so has part: feature:403228-405111:1:exon
subclass of: SO_0000010

position:403228:1
position: 403228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405111:1
position: 405111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403228-405111:1:exon

GJU04_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mnmG
locus tag: GJU04_RS02000
old locus tag: GJU04_01995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001802511.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
translation: MYDFNKFDVIVVGGGHAGTEAAIASAKMKKKTLLITNNLDTIGQMSCNPAIGGVGKSHLVKEIDALNGIMATAIDYSGINFKILNSSKGPAVQSTRAQADREIYKSQIKLLLSKEKNLFFFQQEVKKIIIKNYKIIGILTKNNDIINAKVVILTTGTFLNGKIFIGLNNKFNGGRINDSSSTDLANFLNELPLKKGRLKTGTPPRIDKRSIDFSKLEIQNSDIPLPYFSFIGNAEQHPKQLPCYITYTNKNTHQIIIDNIIQSPIYAGLIKSKGPRYCPSIEDKIIKFPNKDQHQIFLEPEGIFSYEIYPNGISTSLPFDMQFTIIKSIKGLENAYITRPGYAVEYDFYDPKGLKPTMESKFIKGLFFAGQINGTTGYEEAAAQGLIAGLNASLLIDKKKNWYPLRNQAYIGVLIDDLCTLGTKEPYRMFTSRAEYRLLLRENNADIRLTEIGYKLGLVDNLRWQKFNEKLENIEKEYQKIKNFYLNYNDKKNIKKINLLLKNPIKNNINGINLLKRSEINCLDLIKLNIFNFKIKNLETIKYIETELKYQGYIKRQEQFIKKFKKNEKILIPINIKYFNIKSLSNEAIDKFNLYKPFNLGQASRIPGITPADISILLIYLLKTKNN
SIO_010081: GJU04_RS02000
subclass of: SO_0000673
so part of: GJU04_RS02000
location: 403228..405111
location: region:403228-405111:1
so has part: feature:403228-405111:1:exon

WP_168893218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403228-405111:1:exon

GJU04_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nrdA
locus tag: GJU04_RS02010
old locus tag: GJU04_02005
so part of: sequence
location: 407369..409651
location: region:407369-409651:1
so has part: feature:407369-409651:1:exon
subclass of: SO_0000010

position:407369:1
position: 407369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409651:1
position: 409651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407369-409651:1:exon

GJU04_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nrdA
locus tag: GJU04_RS02010
old locus tag: GJU04_02005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874136.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class 1a ribonucleoside-diphosphate reductase subunit alpha
translation: MKQNLFVIKRNGYKELININKINLLLSRAAKNLQKISLSQIKKQLYLQLYNEINTTNIHNILIKITADFISETNPDYQYMAARLAISYLRKEAYGTFIPPKLYVHIKKMVHLKKYDKFLLKEYTKKDFYLMENFIDHNRDMNFSYAAVKQLEGKYLVKNRITGKIYESAQFLYILIAACLFAKYPSNERINYIKFFYDAISKFKISLPTPIMSGVRTCTKQFSSCILIECGDNIDSINATTSSIVKYVSQKAGIGINAGRIRAVGSPIRNGEALHTGCIPFYKHFQTAIKSCSQGGVRGGAGTLFYPLWHLEITNLLVLKNNRGIETNRVRHLDYGVQINKLLYQRLINGEIITLFSPSDVPDLYEYFFSNQKKFNDLYEKYEKNIKVRKKKISAVNLFSLMMQERTSTGRIYIQNVDHCNTHSAFNPKIAPIRQSNLCLEITLPTKILHKIDDPNGEIGLCTLAAINLGQIKNLKEIKKLSDLIVRALNCLLDYQKYLIPAAKNSALGRRPLGIGVINFAYYLAKNNVRYSDNSANNLTHKTFETIQYYLLKASNNLAKIKGSCPLFKDTNYSKGILPIDTYKKFIDNLHTEKLHYNWEKLRKNIKKYGLRNSTLSALMPSETSSQISNATNGIEPPRGFISIKTSKNGILKQVVPEFLKLKKKYELLWNIPNNNGYLNLIGIMQKFIDQSISSNINYDPSRFNKNKIPMQQLLKDLLFSYKLGIKTLYYQNTRDGAKDNQNENILQSNNGCVNGSCVI
SIO_010081: GJU04_RS02010
subclass of: SO_0000673
so part of: GJU04_RS02010
location: 407369..409651
location: region:407369-409651:1
so has part: feature:407369-409651:1:exon

WP_168893220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407369-409651:1:exon

GJU04_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: nrdB
locus tag: GJU04_RS02015
old locus tag: GJU04_02010
so part of: sequence
location: 409686..410816
location: region:409686-410816:1
so has part: feature:409686-410816:1:exon
subclass of: SO_0000010

position:409686:1
position: 409686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410816:1
position: 410816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409686-410816:1:exon

GJU04_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: nrdB
locus tag: GJU04_RS02015
old locus tag: GJU04_02010
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499336.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class Ia ribonucleoside-diphosphate reductase subunit beta
translation: MSYTTFSKKKNNQLKEPMFFGQSVNIARYDQQKHYIFENLIEKQLSFFWRPEEIDISYDQIHYQNLPKNEKHIFISNLKYQTLLDSIQGRSPNIALLPLVSIPELETWIETWSFFETIHSRSYTHIIRNIVNDPSIIFDDIVTNNNIILRTNDIIKYYDELIKTTNYWHLFGEGHFIFDKKKININLYDLKKKLYLCLMSVNILEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEYLHLIGTQYIINIMQKGEEDKDMAKIAIECQKQCYQLFLDASIQEQKWAEYLFCNGSMIGLNKNILCKYIKYITNIRMGKVGLKSPFSIKKNPIPWINSWLISDNVQMAPQEVEVSSYLIGQIDSTVDIKKFKNFKL
SIO_010081: GJU04_RS02015
subclass of: SO_0000673
so part of: GJU04_RS02015
location: 409686..410816
location: region:409686-410816:1
so has part: feature:409686-410816:1:exon

WP_168893221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409686-410816:1:exon

GJU04_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02020
old locus tag: GJU04_02015
so part of: sequence
location: complement(410883..412274)
location: region:410883-412274:-1
so has part: feature:410883-412274:-1:exon
subclass of: SO_0000010

position:410883:-1
position: 410883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412274:-1
position: 412274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410883-412274:-1:exon

GJU04_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02020
old locus tag: GJU04_02015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013202022.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0005275 - amine transmembrane transporter activity [Evidence IEA]
GO process: GO:0015837 - amine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: basic amino acid/polyamine antiporter
translation: MNKKLNLISLTSLVLSSMLGAGVFSLPQNMAIIAGPFALLIGWGITGIGIIFLATTLLLLNKIKPNLQGGIFSYAKDGFGNLIGFYSAWGYWLCAVIANVSYLVIVFSAISFFIDTPKHTIFSNGNTWQSMLGASILLWLIHFLLLNGTQTASIINIITTLCKLIPLSIFIILSFVVFNFKTFKIDLMGYYLNNSLLKQIKDTMLITLWVFIGVEGAVILSSRAKNKNDVGKATLLAVIIALFIYLLVTILSFGIMNRIDLASMKNPSIAGIMTILIGKFGNLFTAMGLIISVCGAYLSWTIMAAEVPWIASKNNIFPNILSKQNDNNAPSYALWFTNISMQICLILIWISKIDYNKLLTIASEMILVPYFLVGAYLLKISFIKKNKFNIFIGLGSCIYSIWLLYAAGFLNLLLSLVLYIPGLIFLVLTKINNPNILFLNKIEKFFCFILLLVSFYSLYFLMR
SIO_010081: GJU04_RS02020
subclass of: SO_0000673
so part of: GJU04_RS02020
location: complement(410883..412274)
location: region:410883-412274:-1
so has part: feature:410883-412274:-1:exon

WP_168893222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410883-412274:-1:exon

GJU04_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02025
old locus tag: GJU04_02020
so part of: sequence
location: complement(412373..413119)
location: region:412373-413119:-1
so has part: feature:412373-413119:-1:exon
subclass of: SO_0000010

position:412373:-1
position: 412373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413119:-1
position: 413119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412373-413119:-1:exon

GJU04_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02025
old locus tag: GJU04_02020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091405.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0051540 - metal cluster binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Nif3-like dinuclear metal center hexameric protein
translation: MKNKELEIIINNKLNTNFSIQDYIPNGLQIEGKKYIKNIIMGVSACQKLLDIAVKFKADAIIVHHGYFWNNESLIIKGSKKKRIFTILKNNINLYSWHLPLDINHKIGNNIYLSKILDINFKGKINPFVFYGYLKNKISIKEFLFIIKNKLNRTPLHFGENAPKKIYKIAWCSGAGQKFLEEVINYNIDVFITGEVSEMNFHIANENKIHFISAGHHATEKGGVIMLGNWLKKKFKLNANFINIPNPV
SIO_010081: GJU04_RS02025
subclass of: SO_0000673
so part of: GJU04_RS02025
location: complement(412373..413119)
location: region:412373-413119:-1
so has part: feature:412373-413119:-1:exon

WP_168893285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412373-413119:-1:exon

GJU04_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02030
old locus tag: GJU04_02025
so part of: sequence
location: 413253..414626
location: region:413253-414626:1
so has part: feature:413253-414626:1:exon
subclass of: SO_0000010

position:413253:1
position: 413253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414626:1
position: 414626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413253-414626:1:exon

GJU04_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02030
old locus tag: GJU04_02025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014268203.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal recognition particle receptor subunit alpha
translation: MFENLSNKLSKILSRIRNYGRLTEKNIKDTLDEIYINLLEADVALEVTKDFIKKIKKEAIGKKINNNFTPGQEFIKLIHKNLIKIMDSSDKNINLAIQPPAVILFIGLQGVGKTTSVIKLAYFLKKKYKKKVLVASTDIYRPAAIQQLNILAQSVKINFFKINSDMSPIEISKNVLNYAKTNFYDILIIDTAGRLHIDNKMMKEIKNISNLLSPIEILFVIDAMTGQDSINSAKKFNELLPITGIFLTKADSDTRGGAFLSTKYIIKKPIKFVGNGEKINNIAIFSPEIIAAKILGMSSELNIIENIKKKINLKKNQEIINKLKSKKTLNLKDFLDQLEQIKSIGNKNISFLLNKMKINNIQYPINPIINIMNIDNSTINNIKAIMQSMTTLEKENVDILNYSRKKRISLGSGVSILKINVILKQYNQMKLINKKMKKNNNINKIIKYVKNFFNFKK
SIO_010081: GJU04_RS02030
subclass of: SO_0000673
so part of: GJU04_RS02030
location: 413253..414626
location: region:413253-414626:1
so has part: feature:413253-414626:1:exon

WP_168893223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413253-414626:1:exon

GJU04_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsP
locus tag: GJU04_RS02035
old locus tag: GJU04_02030
so part of: sequence
location: 414635..414874
location: region:414635-414874:1
so has part: feature:414635-414874:1:exon
subclass of: SO_0000010

position:414635:1
position: 414635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414874:1
position: 414874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414635-414874:1:exon

GJU04_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsP
locus tag: GJU04_RS02035
old locus tag: GJU04_02030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015874582.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S16
translation: MIKIRLSRKGIKKKPFYKIIVTDSRNSRDGRFIEKLGYFNPFNSKKNSKKKIITFNKDRINFWLSKGAILSKRVHSLIK
SIO_010081: GJU04_RS02035
subclass of: SO_0000673
so part of: GJU04_RS02035
location: 414635..414874
location: region:414635-414874:1
so has part: feature:414635-414874:1:exon

WP_168893224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414635-414874:1:exon

GJU04_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rimM
locus tag: GJU04_RS02040
old locus tag: GJU04_02035
so part of: sequence
location: 414891..415409
location: region:414891-415409:1
so has part: feature:414891-415409:1:exon
subclass of: SO_0000010

position:414891:1
position: 414891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415409:1
position: 415409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414891-415409:1:exon

GJU04_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rimM
locus tag: GJU04_RS02040
old locus tag: GJU04_02035
inference: COORDINATES: protein motif:HMM:TIGR02273.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006364 - rRNA processing [Evidence IEA]
note: Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome maturation factor RimM
translation: MNLLNKKIILGKFGKIYGIKGWIRLFSYTEDKKNIFLYKKLFIINHMKDIFFIKFNKYKNKKKYFIVQINNLYKNQDTIKFINHKIYIFKNELIKYKKKKEYYWHDIIGCYILNNKIYLGKVINIVTTKLYDILIIQPNNLYIKKKILIPFIEPHIIKNIDLINNIIKVNWN
SIO_010081: GJU04_RS02040
subclass of: SO_0000673
so part of: GJU04_RS02040
location: 414891..415409
location: region:414891-415409:1
so has part: feature:414891-415409:1:exon

WP_168893225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414891-415409:1:exon

GJU04_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: trmD
locus tag: GJU04_RS02045
old locus tag: GJU04_02040
so part of: sequence
location: 415437..416195
location: region:415437-416195:1
so has part: feature:415437-416195:1:exon
subclass of: SO_0000010

position:415437:1
position: 415437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416195:1
position: 416195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415437-416195:1:exon

GJU04_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: trmD
locus tag: GJU04_RS02045
old locus tag: GJU04_02040
EC number: 2.1.1.228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354288.1
GO function: GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(37)-N1)-methyltransferase TrmD
translation: MWISIISLFPEMFKTYIKYGLINKSIKKKLLNISFWNPRDFIKNKFSKIDSNIYGGGGGIILKAEPLIKSIYKAKIEMKNNVKIIYLSPQGKKINISYIKKLLSYNKMIFICGRYKGIDERVINNFVDEEVSIGDYILSGGELPAMILLDTIVRQIPGVLNNMSSSQTDSFFNNGLLDAPNYTYPKVLKNLKKNTVPSILLSGNHKKIKEWKLQQSLGITWLKRPDLLRKKKLTKKEKILFQNFKKYYFKNK
SIO_010081: GJU04_RS02045
subclass of: SO_0000673
so part of: GJU04_RS02045
location: 415437..416195
location: region:415437-416195:1
so has part: feature:415437-416195:1:exon

WP_168893226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415437-416195:1:exon

GJU04_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplS
locus tag: GJU04_RS02050
old locus tag: GJU04_02045
so part of: sequence
location: 416212..416568
location: region:416212-416568:1
so has part: feature:416212-416568:1:exon
subclass of: SO_0000010

position:416212:1
position: 416212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416568:1
position: 416568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416212-416568:1:exon

GJU04_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplS
locus tag: GJU04_RS02050
old locus tag: GJU04_02045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009874354.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L19
translation: MNNIISYVEKEQIKNYNKYPIFRSGDTLEIKIWVVEGLKKRLQTFEGIVISLVKRNSFNCSFTIRKLSNGIGVERVFPLYSKIINSIIIKKTGHVRKAKLYYLRKLTGKAARIKERLL
SIO_010081: GJU04_RS02050
subclass of: SO_0000673
so part of: GJU04_RS02050
location: 416212..416568
location: region:416212-416568:1
so has part: feature:416212-416568:1:exon

WP_168893227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416212-416568:1:exon

GJU04_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: recD
locus tag: GJU04_RS02055
old locus tag: GJU04_02050
so part of: sequence
location: complement(416589..418457)
location: region:416589-418457:-1
so has part: feature:416589-418457:-1:exon
subclass of: SO_0000010

position:416589:-1
position: 416589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418457:-1
position: 418457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416589-418457:-1:exon

GJU04_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: recD
locus tag: GJU04_RS02055
old locus tag: GJU04_02050
EC number: 3.1.11.5
inference: COORDINATES: protein motif:HMM:TIGR01447.1
GO component: GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO function: GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease V subunit alpha
translation: MQYFFKKLCEIGIIRLIDFYLASILIPEEQKYLKYSITLLSNSISKGNICLPISKLYLNIDIKNQKNIFFIKKIKEINQITNWKNILYQNKEIISNGKKITPIILENNCLYLYKLWDEENTIVKNFLKNKFILINQDKIKNILKFLFINNNKNDFFHKQAICAALTHKISIISGSPGTGKTSIVSKIIFTFIKIFNYPFKIRVAATTGKASVRLTQSINNFFKKISLNLINKNEKKNIPSKATTIHNLLKMKIYTEETLYNHQNKLDLDLLIIDEASMINVNLMSIILKSLSKKTKLILLGDEYQLPSIEYGNMFKDLCYFKNFFFTKEYFIWLNMINNNKLQENNNIPKFFFRNFITVLQHNYRYLNSSGINKLALMIKNGDIKKIKELFLLKKYTDINYINILNEKKYKLMINSFINEYKKYFIFLKKNNNHKDILRKFNSYQIICAIKHGFFGTKIINNIIEKELFNKKFLINNIFYNNWYIGRPIIINQNNNFLNLFNGDIGITFFDENDKKLKVKFLLSNSKYQIISIKNLPSYDIAYAITTHKAQGSEFENISLVLPNKFYPILTRELIYTAITRAKKKINIYSHKSIFYKAIKSKIKRFSNIKKKIINYLENSYL
SIO_010081: GJU04_RS02055
subclass of: SO_0000673
so part of: GJU04_RS02055
location: complement(416589..418457)
location: region:416589-418457:-1
so has part: feature:416589-418457:-1:exon

WP_168893228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416589-418457:-1:exon

GJU04_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: recB
locus tag: GJU04_RS02060
old locus tag: GJU04_02055
so part of: sequence
location: complement(418488..422030)
location: region:418488-422030:-1
so has part: feature:418488-422030:-1:exon
subclass of: SO_0000010

position:418488:-1
position: 418488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422030:-1
position: 422030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418488-422030:-1:exon

GJU04_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: recB
locus tag: GJU04_RS02060
old locus tag: GJU04_02055
EC number: 3.1.11.5
inference: COORDINATES: protein motif:HMM:TIGR00609.1
GO component: GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO function: GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease V subunit beta
translation: MIKKIIKLKEFDPFKENLQGQYLIEASAGTGKTFTIIILYLRMLLGLHQKNYNGLPLTVEQILVVTFTDIATQDLCKRIKKSIRILRKGCLEKKSKYDIINYFIKKIKDHKIAHNLLLKAELNMHNASIYTIHSFCQKILNFKNYEIYDFFSNKKIISDESILQQEASVNFWRKYFYNLPKKIARIIFSYWKNPFDLLNTLTPFLLKKPFPKIKNLIKNKDFYIQFYKNIKYIKIIKKYWIKYKNNIFNIITNSSVNKHIYNQKLINKWINIIDLWTFTESKDNFYPQELSKFSQKFLINNTINNTKIPKYILFKYIDIFLQKFNDLKFLIILKAIKYINKYTTKKKKIKNEISFNDLLIILNKGLNSPFGIKIAKDIKKLFPVILVDEFQDTDIQQYNILKKIYINKLNSIIILIGDPKQAIYSFRGADIFTYLKASFEIKKCYTLKNNWRSSRTMVNSINKIFSNRSYPFLFKNIIFYPLRYTTKKLNYNFIINKKIIPGITFWFINKTIDINAYKQKIAYTCAYEICQLIILGEKNKVFFQKNYKNQKIKISDITVLVRNRFEASILQKEFIKFKLPSIYLSDTDNIFEKEETKELILLLKTILKPNKEQKIINILSSTLFNVNLSFFIENKEKNYIKKIIDKFINYKSIWEKYGILTMLETIFIKDVLFYKKNTINNFIEKKIKNILYLGELIQISCINMINCKQIIEWLSQQIVNTNKNLLNKQVKLHYDVNKIKIMTIHKSKGLQFPIVWLPFISSNIIDSINKDAVIYHDRKNFKSILDFKKDKESKIFFLEESLAENLRLLYVSLTRSIFHCSIGIANIKFFNLKKLNLYLKYFNALDFLLKKKNNISNIQLEKILNNLKNNDISIKIIKKKNLIKIDDKILKKPKKKLLFTHKINNFFFKNKIISNFSKIKKQQNINFNYLNNIKNIFINPNKNQFKKTQYNFPHGKKIGIILHKILEKLDFTQIISRKFIKEELIKKNINFTWHIMLTNWFNNILKKPISNKNIILNKIDNKNKKTEFKFYLSIKKTFSSTKYNNCISKYDIISYNLYKLKFKVIEGFLSGIIDLIFLWEKKYYIIDYKSTWLGNDHKKYKKKYIQNDICLNRYDIQYQIYSLALHKYLKYRISNYNYKKHFGGVIYLYIRGINNKKNQNGIWITKPSLKLINELNKLFI
SIO_010081: GJU04_RS02060
subclass of: SO_0000673
so part of: GJU04_RS02060
location: complement(418488..422030)
location: region:418488-422030:-1
so has part: feature:418488-422030:-1:exon

WP_168893229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418488-422030:-1:exon

GJU04_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02065
old locus tag: GJU04_02060
so part of: sequence
location: complement(422046..425219)
location: region:422046-425219:-1
so has part: feature:422046-425219:-1:exon
subclass of: SO_0000010

position:422046:-1
position: 422046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425219:-1
position: 425219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422046-425219:-1:exon

GJU04_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02065
old locus tag: GJU04_02060
EC number: 3.1.11.5
inference: COORDINATES: protein motif:HMM:NF016169.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease V subunit gamma
translation: MFTSYYSNNINILLDIIKIQIKKNPLKNPLTPEIILFDQHKNFSKLIKIYFSKILGIYSNIEFISFDKFIWNTFIKIIPNISKNNILYKENITWLILLLIPKLIATQEFINFKKKFGSKIRNFDYLFQISTQISNLYNDYQKYQPELLFLWEKNKIFSSLNNEHQIWQAKLWREILKYYKNNLNKKLWYCSKLFFFYENYKKKILFKYNLIPERIFVLDIQNIPLIYLNLLKKIEKYVEIHILICNPSKYYWGNISENINLNKKKNINFNRLLFSWGNYCLNNINKLINLSSRYIETYIENKNLSLLDNIKNDILYLNENNLKYKKKINSLDKSIQVNICEDLYTETKLLYNNILYILKKNPNYFLHDIIVVSPNLELYVPYINAIFKNINIPINIYSNRDKIKNLDILNKFLFLLKIPYKNLTPKEIFFLLDDYYISNKFFLNKDDLEYLHYWIKDLGIKYGLNIKNFHNINLPKDQYTWKLGIYRIFLGFVLNQNIGKWKNLIPYNISLGLSKELIGKFLYFLIQLEKWKNKLNKKYFLKKWKNILLKLYQNFFPKNKFIDKNIYFIIKKIFLFLDQGINLKYKKKISIEIIIKKVQFFIKKKHKNFLFSINKLNFCSLNIFQNIFFKQIFLIGMNNDYFPKKKYPIIFDLLKNNIYKNNYLDKEKNLFLKIIISTENKLFISYTDNNKINNNISSIVKKLLLYISKNYFFKKKIINNNIIKYFNRDYKSKYIHFFNKKEFNNNIVINNIIVKKPIKINKLKINNLINFWKHPIKGFFNQKLKIYLKNLNQIKVSNTEPFTINYLQEYIINKKILRTLILNENINDLYYFYLNNGVLPYGYYGEIWWEEKIYKINQIFNYKFQKYKYIEKTYIINLKILNIFLRGKIKFFQYKKGLIKFEPKIIDIKTIISLWLKHLILCANNIDNEKINLFIYGFKKTKYNFKFLKKNKAIFLLEKYINGYLSGINHPIFLPMKSSWIWINTCYDKIKKCINNDLFIQKQAKKNFFYYWNNNNFINENNDPYFKKLNFDLNEKEWIRITKIIKKWMNDLLYYNN
SIO_010081: GJU04_RS02065
subclass of: SO_0000673
so part of: GJU04_RS02065
location: complement(422046..425219)
location: region:422046-425219:-1
so has part: feature:422046-425219:-1:exon

WP_168893230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422046-425219:-1:exon

GJU04_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lgt
locus tag: GJU04_RS02070
old locus tag: GJU04_02065
so part of: sequence
location: complement(425232..426086)
location: region:425232-426086:-1
so has part: feature:425232-426086:-1:exon
subclass of: SO_0000010

position:425232:-1
position: 425232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426086:-1
position: 426086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425232-426086:-1:exon

GJU04_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lgt
locus tag: GJU04_RS02070
old locus tag: GJU04_02065
EC number: 2.5.1.145
inference: COORDINATES: protein motif:HMM:TIGR00544.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO process: GO:0009249 - protein lipoylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MYKKYFLFPNINPIFLKINKINIYWYGIMYFLSFILVKKISYIRNKNNNFWKKEEINNLLCFCFLGLLLGGKIGCVLLYNTHFFIKNPIILIKVWTGGMSFFGGLIGTIIVIFYISYIKKKKFLQITDFIVPMIPIGIGMGRIGNFINSELWGKVTNVPWAIIFPNSIKKDLIYLKKNLKYKKIFIQYGNLPRHPTQIYESLLEGIMLFLILNIIFKKNIFTGYKSILFLLFYGIIRFFIEYFREPDIQFNLFKNYIILTIDQLFSIIMIISGIILFIKKKSFN
SIO_010081: GJU04_RS02070
subclass of: SO_0000673
so part of: GJU04_RS02070
location: complement(425232..426086)
location: region:425232-426086:-1
so has part: feature:425232-426086:-1:exon

WP_168893231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425232-426086:-1:exon

GJU04_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02075
old locus tag: GJU04_02070
so part of: sequence
location: 426161..426838
location: region:426161-426838:1
so has part: feature:426161-426838:1:exon
subclass of: SO_0000010

position:426161:1
position: 426161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426838:1
position: 426838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426161-426838:1:exon

GJU04_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02075
old locus tag: GJU04_02070
inference: COORDINATES: protein motif:HMM:NF014970.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MutH/Sau3AI family endonuclease
translation: MREIFSTFIPNENILFLRAKLITGYYIIDIARWLNYKISDNTKKDKGIIGKLIEFYLIGKKKNNLSNQDIPYLGIEIKTITINLNNKSINNSFICSLPLVNKNLFYFYKSKLYNKLSKILWIPIIIKNINTPILKRRIGKPFFWIPTIDDKIKLNYDWSNLIKLLILGKIKNINSYNGYILLIKNKGKKKSFTKTINNLGKTISVPPKALYFKKNFLNSLLKNNY
SIO_010081: GJU04_RS02075
subclass of: SO_0000673
so part of: GJU04_RS02075
location: 426161..426838
location: region:426161-426838:1
so has part: feature:426161-426838:1:exon

WP_168893232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426161-426838:1:exon

GJU04_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: lysA
locus tag: GJU04_RS02080
old locus tag: GJU04_02075
so part of: sequence
location: complement(426847..428112)
location: region:426847-428112:-1
so has part: feature:426847-428112:-1:exon
subclass of: SO_0000010

position:426847:-1
position: 426847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428112:-1
position: 428112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426847-428112:-1:exon

GJU04_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: lysA
locus tag: GJU04_RS02080
old locus tag: GJU04_02075
EC number: 4.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014500120.1
GO function: GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate decarboxylase
translation: MQIFDKKFNKNNISIKTILFLIKKYKTPFWLYCAENIKNKILQLKKFDTIRFAQKSCSNINILKIMRYEGVKVDAISLGEIERALTAGYNPKKNNDIVFTSDIFDKQTLKRIIDLNITVNIGSIDMIHQLGSISKGHNIWLRINPGFGHGHNKRTNTGGETSKHGIWYTDLKKSIYLIKKYNLNLIGIHMHIGSGVDYYHLQKVCNSMLNNVLKPYMPKIDIISAGGGLSIPYKERDIKVNTDHYFKLWNNTRNIINNFFKKNIKLEIEPGRFLVAESGILICQVCAIKNIKKKRFVIVDAGFNDLIRPVMYGSYHYISAISSKGKDMSNDLKINTIVAGPLCESGDIFTQLDNGEISYFMLPIVNLGDYLIFHDTGAYGASMSSNYNSRPLIPEILIENNIPKIIRRRQKIQELINLELF
SIO_010081: GJU04_RS02080
subclass of: SO_0000673
so part of: GJU04_RS02080
location: complement(426847..428112)
location: region:426847-428112:-1
so has part: feature:426847-428112:-1:exon

WP_168893286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426847-428112:-1:exon

GJU04_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02085
old locus tag: GJU04_02080
so part of: sequence
location: 428493..428747
location: region:428493-428747:1
so has part: feature:428493-428747:1:exon
subclass of: SO_0000010

position:428493:1
position: 428493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428747:1
position: 428747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428493-428747:1:exon

GJU04_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02085
old locus tag: GJU04_02080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1
GO function: GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HPr family phosphocarrier protein
translation: MLQKEIIIHNNHGLHTRPAALLVKEAKNFISDITITSKGKTVNAKSLFKIQTLGLTKGTLIILKTSGIDEKNAIEHLTKIIQKL
SIO_010081: GJU04_RS02085
subclass of: SO_0000673
so part of: GJU04_RS02085
location: 428493..428747
location: region:428493-428747:1
so has part: feature:428493-428747:1:exon

WP_168893233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428493-428747:1:exon

GJU04_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ptsI
locus tag: GJU04_RS02090
old locus tag: GJU04_02085
so part of: sequence
location: 428886..430604
location: region:428886-430604:1
so has part: feature:428886-430604:1:exon
subclass of: SO_0000010

position:428886:1
position: 428886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430604:1
position: 430604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428886-430604:1:exon

GJU04_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ptsI
locus tag: GJU04_RS02090
old locus tag: GJU04_02085
EC number: 2.7.3.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate-protein phosphotransferase PtsI
translation: MISGILASPGISFGKAFLLKKNNIIINRNKITDNQINIEIKKFLDSQKKSIEQLEYIKKKSLSNLNSEKDLILDGHLLFLEDEEMTKEIIFLIKNNLFSADAAVDSVIKSQIKTLENLDDTYLKERIIDIKDIGDRLIKNILNLNIINLDEINQKVILISKDLTPSETAQLDLKKILGFITDLGSNTSHTAIMARSLEIPAIVGTGNITTKVKTNDYIILDSINNLIYINPSINIIKEKKILFNQYIIEKEKLKKNSNLPAQTKDHFKIKICANIGSLKELNNIEKNGADGIGLYRTEFLFMNRVSLPTEEEQFNIYKTVAINMRNKSVIIRTMDIGGDKKIPYMNLPKEENPFLGYRAIRISMDRKDILHTQLRAILRASFFGKLYIMFPMIISIEEVLFLKEELNFLKKQLQKQKYNFNKNIPIGIMIETPASAIIAHHLIKEIDFFSIGTNDLTQYTLAVDRGNDLISHLYNSIHPAILFLIKKVIDASHEEGKWTGMCGELASDENFIPILLGMGLNELSMNSISIPKIKNIIRNIEMSRAKELANNVLLQPTIKKIKNLLLEFNKKK
SIO_010081: GJU04_RS02090
subclass of: SO_0000673
so part of: GJU04_RS02090
location: 428886..430604
location: region:428886-430604:1
so has part: feature:428886-430604:1:exon

WP_168893234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428886-430604:1:exon

GJU04_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: crr
locus tag: GJU04_RS02095
old locus tag: GJU04_02090
so part of: sequence
location: 430625..431131
location: region:430625-431131:1
so has part: feature:430625-431131:1:exon
subclass of: SO_0000010

position:430625:1
position: 430625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431131:1
position: 431131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430625-431131:1:exon

GJU04_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: crr
locus tag: GJU04_RS02095
old locus tag: GJU04_02090
EC number: 2.7.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008926530.1
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS glucose transporter subunit IIA
translation: MNIFSNFFKKKQKKIEITKIFAPISGSIIDIEKVPDIVFSDKIVGDGIAINPTGNIIVSPIDGIIGKIFETNHAFSIRTLNKIELFVHFGIDTVKLKGKGFIRKFNFEKNNIVKKGEIIIELDLNFLKKTAKSIYTPVIVSNIEDINKIKKYSGNVIAGIDPILEIYK
SIO_010081: GJU04_RS02095
subclass of: SO_0000673
so part of: GJU04_RS02095
location: 430625..431131
location: region:430625-431131:1
so has part: feature:430625-431131:1:exon

WP_168893235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430625-431131:1:exon

GJU04_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ruvC
locus tag: GJU04_RS02100
old locus tag: GJU04_02095
pseudo: true
so part of: sequence
location: complement(<431252..431707)
location: region:431252-431707:-1
so has part: feature:431252-431707:-1:exon
subclass of: SO_0000010

position:431252:-1
position: 431252
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:431707:-1
position: 431707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431252-431707:-1:exon

GJU04_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ruvC
locus tag: GJU04_RS02100
old locus tag: GJU04_02095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007677938.1
GO function: GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: crossover junction endodeoxyribonuclease RuvC
SIO_010081: GJU04_RS02100
subclass of: SO_0000673
so part of: GJU04_RS02100
location: complement(<431252..431707)
location: region:431252-431707:-1
so has part: feature:431252-431707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431252-431707:-1:exon

GJU04_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02105
old locus tag: GJU04_02100
so part of: sequence
location: complement(431745..432458)
location: region:431745-432458:-1
so has part: feature:431745-432458:-1:exon
subclass of: SO_0000010

position:431745:-1
position: 431745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432458:-1
position: 432458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431745-432458:-1:exon

GJU04_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02105
old locus tag: GJU04_02100
inference: COORDINATES: protein motif:HMM:NF013841.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YebC/PmpR family DNA-binding transcriptional regulator
translation: MSGHSKWANTRHRKKLQDNKKDKIFSRIIKELNTALKKGGHINPQYNSKLRLVIEKALSFNMSRSTINNILEKKKKNNNTLKEIYYEGYGPNNIALMIQCLTNNNNRTSSLIRNIFNKTGGSLKQKGAVNYIFKKQIFVSYSCKNNLDNIIDIAEKLKADDILYNKENIKIIFSKKKYKLLTKEIKNFKIKPIEINLFIEPFIKKKIDIFTKNKLSIFLSLCKENEDIKNIYHDAEI
SIO_010081: GJU04_RS02105
subclass of: SO_0000673
so part of: GJU04_RS02105
location: complement(431745..432458)
location: region:431745-432458:-1
so has part: feature:431745-432458:-1:exon

WP_168893237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431745-432458:-1:exon

GJU04_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: aspS
locus tag: GJU04_RS02110
old locus tag: GJU04_02105
so part of: sequence
location: complement(432503..434248)
location: region:432503-434248:-1
so has part: feature:432503-434248:-1:exon
subclass of: SO_0000010

position:432503:-1
position: 432503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434248:-1
position: 434248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432503-434248:-1:exon

GJU04_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: aspS
locus tag: GJU04_RS02110
old locus tag: GJU04_02105
EC number: 6.1.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499468.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--tRNA ligase
translation: MKKKIYCGEINKEYINKEIILYGWIDNYRNLGKLIFVNIKDREGVIQAVFKPQYKIAYNVAITLRNNFCVKVKGKIVERTQKNKNFNLITGEIEIIVFNIFILNKSKPLPIDNNMINTEEMRLKYRYLDLRQIKMTKILKQRSIIISYIRNFLEKNNFLNIETPILTNSTPEGSRDYLVPSRIHKHNFYALPQSPQIFKQLLMIAGLDRYYQIAKCFRDEDLRSDRQPEFTQIDIEISFTKSKILRYFIEKMIFNIWKNIKNIFLDKFKILTFKKSMKYFGTDKPDLRNKLKLIDLSNFFIKKNKNRIVSISIKNKYLSNFNIKGLSKYISYIKKYNTNDLNIFQVNNNKLINILNTKNNFIINLNNDQIKDIIYKNNCHNNDIIFIGTETINDNISSMGYLRKKLGKDFNLIKNNKWCPLWIIDFPLFKKNKIGKLIPMNHPFTSPKKEFINNIDNFLKENPHQILSDSYDLVINGYEIGSGSSRINNYKIQKKIFNFLRINEVVQKKNFGFFLEALQFGTPPHIGIALGLDRLIMLLTNTNNIRDVIAFPKTTSANCLLTQAPNKIDFNLLKDLGLSLS
SIO_010081: GJU04_RS02110
subclass of: SO_0000673
so part of: GJU04_RS02110
location: complement(432503..434248)
location: region:432503-434248:-1
so has part: feature:432503-434248:-1:exon

WP_168893238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432503-434248:-1:exon

GJU04_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: argS
locus tag: GJU04_RS02115
old locus tag: GJU04_02110
so part of: sequence
location: 434944..436674
location: region:434944-436674:1
so has part: feature:434944-436674:1:exon
subclass of: SO_0000010

position:434944:1
position: 434944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436674:1
position: 436674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434944-436674:1:exon

GJU04_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: argS
locus tag: GJU04_RS02115
old locus tag: GJU04_02110
EC number: 6.1.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012619482.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine--tRNA ligase
translation: MNIKKILSKKIHESMIKVGIPEKYDVILRSCKKIELGHYQINGIISAAIYLKINPNDLATKVVKNLNIKKIISKITISTAGFINLFVKKKWLSKQINLLITSKKLGLTKKIISENIVIDYSSPNIAKEMHVGHLRSTIIGDSIVRILSFVGHNVIKSNHIGDWGTNFGILIAFLKLKSKKKNLSLSDIEKLYKQAQKKYTQDINFAKKARLYVVKLQNKDISCLRIWKEIVNITMNYNYQLYNRLNIKLTYLDTMGESTYNDMLSNIIIDLKKKGIAINNNGTIIIPIEGIKNIKGELMAVIVQKKDGAYLYATTDIACIKYRYEKFKANRIIYYVDARQNQYLKQIFQIVKKAKYVPSNLKLEHHMFGMILNHKNKPFKTREGKNIKLNDLINKSILKAKNIILQKNPFIKKDILKNLSYHIGIGAIKYADLSKNRINNYIFNWDKMLSLNGNTALYIQYAYVRAISLLKKSNIDLKNFLDLEINFINHYEFNLAILFLDFEEIILKIVEKGTPHILCNWLYKITVLFTSFYENCNILNLKDKILKISRLKIVFLTSLFLKKGLYLLGINTIKKI
SIO_010081: GJU04_RS02115
subclass of: SO_0000673
so part of: GJU04_RS02115
location: 434944..436674
location: region:434944-436674:1
so has part: feature:434944-436674:1:exon

WP_168893239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434944-436674:1:exon

GJU04_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mnmA
locus tag: GJU04_RS02120
old locus tag: GJU04_02115
so part of: sequence
location: 436756..437856
location: region:436756-437856:1
so has part: feature:436756-437856:1:exon
subclass of: SO_0000010

position:436756:1
position: 436756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437856:1
position: 437856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436756-437856:1:exon

GJU04_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mnmA
locus tag: GJU04_RS02120
old locus tag: GJU04_02115
EC number: 2.8.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053778.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]; GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiouridine(34) synthase MnmA
translation: MFKKKVIIAMSGGIDSSFSAWLLKKQNYQVEGLFMKNWEEDDTNNICNIEKDLYHAEIICKKLKIPLHKINFSYEYWKYVFTNFLSEYKKGYTPNPDILCNKIIKFKYFMNFAINNLGADFISTGHYVRCKKIKNKFFLLRGIDDNKDQSYFLYTIKEKQLKKILFPIGGLKKTEVRYFAKKLKFINANKKDSTGICFIGERNFPKFLNKYISSSSGNIVNINGEVIGKHKGLINYTIGQRKGIGLGGSIFYENKPWYVYNKNIKKNILVTIQGRENLYLYSIGLIVKKINWISYIPKNIKKKCTIKTRYRQKDVKCKIIFLGNNRIKVYLYTPISSITKGQSAVFYYGSICLGGGIIEKEIPLIN
SIO_010081: GJU04_RS02120
subclass of: SO_0000673
so part of: GJU04_RS02120
location: 436756..437856
location: region:436756-437856:1
so has part: feature:436756-437856:1:exon

WP_168893240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436756-437856:1:exon

GJU04_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: potA
locus tag: GJU04_RS02125
old locus tag: GJU04_02120
so part of: sequence
location: 437967..439094
location: region:437967-439094:1
so has part: feature:437967-439094:1:exon
subclass of: SO_0000010

position:437967:1
position: 437967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439094:1
position: 439094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437967-439094:1:exon

GJU04_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: potA
locus tag: GJU04_RS02125
old locus tag: GJU04_02120
EC number: 7.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017801907.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0015846 - polyamine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spermidine/putrescine ABC transporter ATP-binding protein PotA
translation: MEKKSFKKILIKLININKSFANKKIIYNLNLEINDGEFITLLGPSGSGKTTIIRLIAGLEKVDSGSIFLSGKEITKYPAEKRQINTVFQSYALFPHMSVFDNIAFGLRMQKKTEKEIIKKVEKILDIVQLKKFINRKPHELSGGQQQRVAIARAVINQPRLLLLDEPLSALDYRLRKKMQNELKALQRKLGITFILVTHNQEEALSISDRIILLRNGIIEQDGSPREIYEEPKNLFVANFIGDINIFNALILKKFNSNQVLANLEGYICKIQVPFNIIEGEKIHVLLRPEDLRIKEINNKTNLNTGLVGYIKEKNYKGMTLESTLKLNNGKIIIVSEFFNENDPYVDHSLNQKMLINWVETWEVVLPYEKGNGIF
SIO_010081: GJU04_RS02125
subclass of: SO_0000673
so part of: GJU04_RS02125
location: 437967..439094
location: region:437967-439094:1
so has part: feature:437967-439094:1:exon

WP_168893241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437967-439094:1:exon

GJU04_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: potB
locus tag: GJU04_RS02130
old locus tag: GJU04_02125
so part of: sequence
location: 439069..439935
location: region:439069-439935:1
so has part: feature:439069-439935:1:exon
subclass of: SO_0000010

position:439069:1
position: 439069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439935:1
position: 439935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439069-439935:1:exon

GJU04_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: potB
locus tag: GJU04_RS02130
old locus tag: GJU04_02125
EC number: 7.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006809223.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spermidine/putrescine ABC transporter permease PotB
translation: MKKVMEYFKKIIIFIIISWLLLFILLPNIIIIIISFLKKDNDNLIILKFSFNNYLNLLDFLYIRVFINSLFISFITTIICLLIGYPFAWCLTKISNKKKSLMLFFLFLPFWVNSLIRIYCLKIFLGINGWFNNILMYFKIINSPIHIIYTPIAVIIGLVYILLPFMIVPIYSSFEKLDQLWIEAAKDLGAKSWKIFFYIIIPLTTSGIIAGCLLVFLPSMGMFYISDLMGGSKNLLIGNIIKNQFLNIRDWPLGAATSTIITLFTGILLILYFKTIKFLNKKEFKKNV
SIO_010081: GJU04_RS02130
subclass of: SO_0000673
so part of: GJU04_RS02130
location: 439069..439935
location: region:439069-439935:1
so has part: feature:439069-439935:1:exon

WP_168893242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439069-439935:1:exon

GJU04_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: potC
locus tag: GJU04_RS02135
old locus tag: GJU04_02130
so part of: sequence
location: 439928..440731
location: region:439928-440731:1
so has part: feature:439928-440731:1:exon
subclass of: SO_0000010

position:439928:1
position: 439928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440731:1
position: 440731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439928-440731:1:exon

GJU04_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: potC
locus tag: GJU04_RS02135
old locus tag: GJU04_02130
EC number: 7.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013366652.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spermidine/putrescine ABC transporter permease PotC
translation: MFKYICRIIFINFIYFCFYIPIILLIINSFNKSRFSIIWQGFTIKWYQLIIHNSSLLEVTYHSLFIGIITATFTTLFGLLTALSLYHFNIHIKSFINTLLFIVIISPDIVMGISLLLLFIFLNLSLGFWTLLFAHITFCFPYVVITIHSRLQDFDNRMIEAAKDLGASEIVILTKIILPIIFPTIISSWLLSFALSMDDITISTFVTGPEYEILPLKIYSMSKIGITPEINVLATILITISLFLVIVSRIILGRYNKTCNQITSLLD
SIO_010081: GJU04_RS02135
subclass of: SO_0000673
so part of: GJU04_RS02135
location: 439928..440731
location: region:439928-440731:1
so has part: feature:439928-440731:1:exon

WP_168893243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439928-440731:1:exon

GJU04_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mutM
locus tag: GJU04_RS02140
old locus tag: GJU04_02135
so part of: sequence
location: complement(440757..441575)
location: region:440757-441575:-1
so has part: feature:440757-441575:-1:exon
subclass of: SO_0000010

position:440757:-1
position: 440757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441575:-1
position: 441575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440757-441575:-1:exon

GJU04_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mutM
locus tag: GJU04_RS02140
old locus tag: GJU04_02135
EC number: 3.2.2.23
EC number: 4.2.99.18
inference: COORDINATES: protein motif:HMM:NF002211.1
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
translation: MPELPEVEVIKNVIKPFLKGKIINYSIIRTKKLRYMIPINIFKIKNQKILDVKRRGRYIIIILFKNTIIIHLGMTGILSIINNKNNIFYHKHDHIDLIINNNFTLRYTDIRKFGFWLWENKNYKKNIFLKKLGPEPLENNFNSLYLYNYTKKKNIYIKILLMDNSIVTGIGNIYANESLFLSKISPFRISNTLNIKEITILTRNIKSILYRSIKYGGSTISNYKLPNHNIGNFSQYFLVYGRKNKLCKICKTQIIRKIQRNRSTFFCCKCQK
SIO_010081: GJU04_RS02140
subclass of: SO_0000673
so part of: GJU04_RS02140
location: complement(440757..441575)
location: region:440757-441575:-1
so has part: feature:440757-441575:-1:exon

WP_168893244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440757-441575:-1:exon

GJU04_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: mnmE
locus tag: GJU04_RS02145
old locus tag: GJU04_02140
so part of: sequence
location: complement(441581..442945)
location: region:441581-442945:-1
so has part: feature:441581-442945:-1:exon
subclass of: SO_0000010

position:441581:-1
position: 441581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442945:-1
position: 442945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441581-442945:-1:exon

GJU04_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: mnmE
locus tag: GJU04_RS02145
old locus tag: GJU04_02140
EC number: 3.6.-.-
inference: COORDINATES: protein motif:HMM:NF003661.0
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
translation: MEKQKNTIIAKVTPTGQGSIGVIRISGNKSIDVIKYTLKLNSLEPRYAHYLPFFYKNKIIDKGIALWFPKPNSFTGEDVLELQCHGNSILLDLLINNILNIPGIRMADPGEFSKRAFLNKKFDLTQVEAIADIISANSQAAIFSAMNLMNGKLSLLLTEFTKIIIKLRVKIESFLEFDYKINFTIFCKKILITLEKLIKFLINIIKYVKNGIRIKEGIKITLIGPPNSGKSSLMNLITDKKISIVTDIPGTTRDILHENIYIDSVPIEIIDTAGIRETSNKIEILGIKKTFEEIKNSNYLFLVIEDKMSENNLSKIIKKYLKNFIKNIPIIIIRNKIDLTNNIPTIIYSSNYTIIKISIKKKIGILNLMNFIKKKILNKNTNENQFSARERYLDILNSIYKYLIKGKNNFLNTNSIELLSEDIRLIQKELDSITGKFYSEDLLNNIFSQFCVGK
SIO_010081: GJU04_RS02145
subclass of: SO_0000673
so part of: GJU04_RS02145
location: complement(441581..442945)
location: region:441581-442945:-1
so has part: feature:441581-442945:-1:exon

WP_168893245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441581-442945:-1:exon

GJU04_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: yidC
locus tag: GJU04_RS02150
old locus tag: GJU04_02145
so part of: sequence
location: complement(442962..444584)
location: region:442962-444584:-1
so has part: feature:442962-444584:-1:exon
subclass of: SO_0000010

position:442962:-1
position: 442962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444584:-1
position: 444584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442962-444584:-1:exon

GJU04_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: yidC
locus tag: GJU04_RS02150
old locus tag: GJU04_02145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014499755.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0032977 - membrane insertase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertase YidC
translation: MNSKNNIFIIIFCLFFFIILGNWQKIHNYIKNYKKQIINENINNKYQFIPNIIRNKNILIKTDKFFLYINPYGGIIEKIQLLDYFEKLNSKNFFTLLRKNNNFIYQIKSGIIQKDNFKKNKYFNQNNKFFSKSYNFKLEKNKNILKIPLFFIKKNILYVKIFSFKRGDYLININHQIFNKSLKPIKVSIFGQIDKSINTPKKYLDKKHNSISIKTFDGVAISTDYNKFKKYKFSKILKKKKINIYTNNGWIAVLQQYFTSAWIIPNFSKKNNIYIKKNFHNTISAGFRSAYYSILPKKKYNFLSKIWIGPKIQNKMSKIAPFLDLTIDYGFLRFLSKPLFNLLNLLFYLIGNWGFAIIVITLIIRFITYPLSKQQFIAINKMNVLQPKIKKIKEKFINDKERFSKEIILLYKKENLNPLMGFIPFIIQMPIFLALYYMLTNSIELRHAPFIFWIKDLSSEDPYYILPIIMSITMLIIQKISQNNFENNSEQEKFIYIIPIIFSLFFLWLPSGLVLYYIINNLITILQQKWVFYKINNKYY
SIO_010081: GJU04_RS02150
subclass of: SO_0000673
so part of: GJU04_RS02150
location: complement(442962..444584)
location: region:442962-444584:-1
so has part: feature:442962-444584:-1:exon

WP_168893246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442962-444584:-1:exon

GJU04_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rnpA
locus tag: GJU04_RS02155
old locus tag: GJU04_02150
so part of: sequence
location: complement(444694..445041)
location: region:444694-445041:-1
so has part: feature:444694-445041:-1:exon
subclass of: SO_0000010

position:444694:-1
position: 444694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445041:-1
position: 445041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444694-445041:-1:exon

GJU04_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rnpA
locus tag: GJU04_RS02155
old locus tag: GJU04_02150
EC number: 3.1.26.5
inference: COORDINATES: protein motif:HMM:NF013022.2
GO function: GO:0004526 - ribonuclease P activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease P protein component
translation: MKYFNFSKKKRLTSLNFNLVFNKPIKLHNKYYSLLSKKNRIKYSRIGIIIPKKIINKTNIRNKFKRIIREYFRLNQYLFINMDYIIIINNKNILKINNFYFKKYLEKIWNIFKIK
SIO_010081: GJU04_RS02155
subclass of: SO_0000673
so part of: GJU04_RS02155
location: complement(444694..445041)
location: region:444694-445041:-1
so has part: feature:444694-445041:-1:exon

WP_168893247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444694-445041:-1:exon

GJU04_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmH
locus tag: GJU04_RS02160
old locus tag: GJU04_02155
so part of: sequence
location: complement(445049..445201)
location: region:445049-445201:-1
so has part: feature:445049-445201:-1:exon
subclass of: SO_0000010

position:445049:-1
position: 445049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445201:-1
position: 445201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445049-445201:-1:exon

GJU04_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmH
locus tag: GJU04_RS02160
old locus tag: GJU04_02155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009873975.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L34
translation: MKRTFQPSVLKKNRSHGFRNRMKTKNGRQIINRRRAKHRIYLSISDKKFK
SIO_010081: GJU04_RS02160
subclass of: SO_0000673
so part of: GJU04_RS02160
location: complement(445049..445201)
location: region:445049-445201:-1
so has part: feature:445049-445201:-1:exon

WP_168893248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445049-445201:-1:exon

GJU04_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: dnaN
locus tag: GJU04_RS02165
old locus tag: GJU04_02160
so part of: sequence
location: 445370..446494
location: region:445370-446494:1
so has part: feature:445370-446494:1:exon
subclass of: SO_0000010

position:445370:1
position: 445370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446494:1
position: 446494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445370-446494:1:exon

GJU04_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: dnaN
locus tag: GJU04_RS02165
old locus tag: GJU04_02160
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR00663.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MIENNIIISRELLIKPLKYVTNIINNKSIYPNISNILIDMLNNGSIFFKSTNLEIEISSFIKNISNIKKYSIIIEGKKFYNICRSLPKNHDINISFSNNQAIISSQNCCFNIATLPANNFPTIDFIKSDIEFNLKHKIIKKFIYATYFSIADNDVRKYLNGLLLQIKNNILNIVSTDGHRLSIYTYSINKNIINYYAIIPKKSILELSKLLNNTNELINIKINKNNICFIFNNLTFISKLIENNFPDYEQIIPKFFHKVIKINRIEFKNSLNRISILVNERTKGVTLLFNNNYLKIFSSNINNEKAEEILKIEKHNNEKKYNINISFNINYLINVINILESEIIKISFIDNISSIKIEDYYKKNKIYLIMPMKI
SIO_010081: GJU04_RS02165
subclass of: SO_0000673
so part of: GJU04_RS02165
location: 445370..446494
location: region:445370-446494:1
so has part: feature:445370-446494:1:exon

WP_168893249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445370-446494:1:exon

GJU04_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: gyrB
locus tag: GJU04_RS02170
old locus tag: GJU04_02165
so part of: sequence
location: 446531..448945
location: region:446531-448945:1
so has part: feature:446531-448945:1:exon
subclass of: SO_0000010

position:446531:1
position: 446531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448945:1
position: 448945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446531-448945:1:exon

GJU04_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: gyrB
locus tag: GJU04_RS02170
old locus tag: GJU04_02165
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017800315.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MTNKYYNASSIQILKGLDAVKKRPGMYIGNTDDGTGLHHMVFEVIDNAIDESLAGYCKNINIIIHNDNSISIIDDGRGIPTDIHKEAQISAAEVIMTILHSGGKFNNKSYKLSGGLHGVGVSVVNALSKKLELVIKRNGKLYKQLYYYGVPQNKLQNIDSSTTTGTHIRFWPNYNIFKNIQSFNYKILSKRLRELSFLNSGLFISINDRRNNKFKSFQYHGGIKEFIKYLNKNQNIIHNNIFYCYKKNKKINIEIAMQWNDSFKEKIYCFTNNIPQENGGTHLSGLKTAITRTINLYIDKEKYNKKKKHIHITGEDTREGLIALISIQISNPKFSSQTKDKLISSEIKSLVECYVNQQLMFFLLENPNDSKKIIEKIIYAAKIRDVTRKTKEIIKNQNTFSISRLPGKLSDCQENNPKLSEIYLVEGDSAGGSAKQGRNRKNQAVLPLKGKILNVEKAGFNKIISSQEIITLITALGCYINKNEYSIDKLRYHNIIIMTDADVDGAHIRTLLLTFFYRQIPQIIEKGYVYIAQPPLYRIKKGNKKLYIKNNEEMEIFTFNIAFNKAIFFFKNSQKILSDKKLLILVNKYNYIKKIIKFSQYIFSDKILFALLYNSKLEKLNDYNNVNLWLNNLLLFLNKKYININFTGNINKNIKQNIFEPIVYENKYGNIDKYLLNYDFFISNEYKKICLLGKKLLSLKERKIFRVEKGEKYKNINSFEEGIEWLLKECKKRFTIQRYKGLGEMNPTQLWETTMNPLTRNMLQVTIKDAKKADKLFSTLMGDQVEPRRLFIKNNALKAINIDI
SIO_010081: GJU04_RS02170
subclass of: SO_0000673
so part of: GJU04_RS02170
location: 446531..448945
location: region:446531-448945:1
so has part: feature:446531-448945:1:exon

WP_168893250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446531-448945:1:exon

GJU04_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpoZ
locus tag: GJU04_RS02175
old locus tag: GJU04_02170
so part of: sequence
location: complement(448986..449237)
location: region:448986-449237:-1
so has part: feature:448986-449237:-1:exon
subclass of: SO_0000010

position:448986:-1
position: 448986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449237:-1
position: 449237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448986-449237:-1:exon

GJU04_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpoZ
locus tag: GJU04_RS02175
old locus tag: GJU04_02170
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit omega
translation: MARVTVEKAVKKIGNRFDLVIIAAKRARQIQIRGKIPLLSEKNDKTTILALREIEQGLINKKTIDNYEKNIDKKFQSIDLDNY
SIO_010081: GJU04_RS02175
subclass of: SO_0000673
so part of: GJU04_RS02175
location: complement(448986..449237)
location: region:448986-449237:-1
so has part: feature:448986-449237:-1:exon

WP_168893251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448986-449237:-1:exon

GJU04_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: ppa
locus tag: GJU04_RS02180
old locus tag: GJU04_02175
so part of: sequence
location: 449393..449935
location: region:449393-449935:1
so has part: feature:449393-449935:1:exon
subclass of: SO_0000010

position:449393:1
position: 449393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449935:1
position: 449935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449393-449935:1:exon

GJU04_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: ppa
locus tag: GJU04_RS02180
old locus tag: GJU04_02175
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070284.1
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MNLNCVPSGENIPNDINVIIEISSNSNPIKYEINKKYGILFVDRFINIPIFYPCNYGYINNTLSLDGDCLDVMVITKYQIMPGSVIRCRPIGLLNMIDESGDDKKIIAVPHDKISQEYTFIKSIKDLSIFLQKQIIYFFKHYKDLEQNKWCKVNDWGNVAQAENEILLSIKRFKTKNDNY
SIO_010081: GJU04_RS02180
subclass of: SO_0000673
so part of: GJU04_RS02180
location: 449393..449935
location: region:449393-449935:1
so has part: feature:449393-449935:1:exon

WP_168893252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449393-449935:1:exon

GJU04_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: eno
locus tag: GJU04_RS02185
old locus tag: GJU04_02180
so part of: sequence
location: 450045..451292
location: region:450045-451292:1
so has part: feature:450045-451292:1:exon
subclass of: SO_0000010

position:450045:1
position: 450045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451292:1
position: 451292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450045-451292:1:exon

GJU04_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: eno
locus tag: GJU04_RS02185
old locus tag: GJU04_02180
EC number: 4.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012005243.1
GO function: GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphopyruvate hydratase
translation: MSKIKKIIGREILDSRGYPTIEAEVHLNNNIIGSASVPSGASTGSKEAIELRDGDKKRFLGKGVLKSVKIINNIFSKYLINQNSLDQENIDKIMINLDNTENKSNFGANTILAVSLANARAAALYKKIPLFQYISDINNTKEKFFMPLPMINIINGGKHADNNLDIQEFMIQPISAKNIKEAIRYGAEIFHHLSLVLKEKKLITSVGDEGGYAPNLNNNSEAFDMISKAVYNAGFILGKDITFAIDCAASELFYNKKYHLEGEKINLSSKEFTNFLSNLVKKYPITSIEDGLDESDWDGFIYQTKILGSKIQLVGDDLFVTNQKYLKKGIKYKVANAILIKLNQIGSLTETLSTIKIAKKAGYKIIISHRSGETEDTFISDLAVGTNADQIKTGSMSRSDRNAKYNQLIRIEEKL
SIO_010081: GJU04_RS02185
subclass of: SO_0000673
so part of: GJU04_RS02185
location: 450045..451292
location: region:450045-451292:1
so has part: feature:450045-451292:1:exon

WP_168893253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450045-451292:1:exon

GJU04_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02190
old locus tag: GJU04_02185
so part of: sequence
location: 451363..453084
location: region:451363-453084:1
so has part: feature:451363-453084:1:exon
subclass of: SO_0000010

position:451363:1
position: 451363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453084:1
position: 453084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451363-453084:1:exon

GJU04_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02190
old locus tag: GJU04_02185
inference: COORDINATES: protein motif:HMM:NF012869.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter transmembrane domain-containing protein
translation: MKIYTEEKIIFWLKKQSFFAKNLLIISYLLNFINICLLIIQNWILSKQIQTFFFKENKNKIFHYYIILFLCFIIKIFITILINKINFYYSEIIKVSIRKKVLNKLTSRYYERLKNQTTGSDISLIINQVENLQDYYNEYIPQFFRIKISSLIILITIFFISWIIDLIIIIISIIIIFFIILIGKKTTQKNKKNFKILSLLNGLFFDRLKGIETIRLFNLRKIEIKKISFYIEQYRKKNIEILKIIFLTSAILEFFSSVSLAFIIMYFSFTYLHIINFGFYNKNIKILHSFFILMLISEYFQNFSNLGKLYHIKSKAIGAADNIIKLLNNKIYILKKKEEFFLKNSNKLEIIAKNLIIKNKKGNILIGPISFKIFSGQNIVIIGANGCGKTTLFNVLLGLLPYHGSLKINNIEFKNINLYSWYEKISYVKQNPKLPAITIRKNLFFNKNINISKIEKIIKEIGIIDFLKKLPHGIDTSLYKEDIYLSVGQLQRIAIARALIKDHLILLLDEPISNIDIKSQYDIIKSIKKNNSSFKISITITHKIYQINYYNVIWYMENGKIVKKHILKIKKNK
SIO_010081: GJU04_RS02190
subclass of: SO_0000673
so part of: GJU04_RS02190
location: 451363..453084
location: region:451363-453084:1
so has part: feature:451363-453084:1:exon

WP_168893254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451363-453084:1:exon

GJU04_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
locus tag: GJU04_RS02195
old locus tag: GJU04_02190
so part of: sequence
location: 453114..454859
location: region:453114-454859:1
so has part: feature:453114-454859:1:exon
subclass of: SO_0000010

position:453114:1
position: 453114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454859:1
position: 454859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453114-454859:1:exon

GJU04_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
locus tag: GJU04_RS02195
old locus tag: GJU04_02190
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MFYVFYFLKNYKGYIKKIFLGIFLSIINNLMNLFLSIISGYLLTYTFLLSMKDNLIDYNYIIPSTIIRLISVIKIITKYFEKIIQHNNTLYFLKKLRILLLKKIFPLYPSNLISIHNIEILNILISDIEILDFLYLQIITPFLIIIIIILLVLIYLSIFNTFFFIILFINILILTIFYLFYFYKKGKIIGEKNINIKKKYYYLINNFLSYYTEYKIFEGIKYISNRINILELKLQKIQLIKNNNNIYSQLLMNIITDINIIIILLYTHIYFNNIKLQYKIILFLLFLITFSKILFPLNNIFQNIHEIFFSAKKIFNIIKKKPIITFINKEKINKNYYLKLDIKNLSFYYKKNYPYILKNISLHIKKKQKIAITGHNGCGKTTLFMLLTRAWDPIKGAIYLNECDLNKWNLSSLRTSISVLPQKIYLFSDTLKNNILLNNQNNINISNEYLIKILKLVGLKKLLDKKNNLDIWMGEGGRTLSGGELKKLGIARIIFHNGDLILLDELTEGLDAISSTKIINLILSIFQKKIIIFITHNIEIMKKMDCIYFMDNGFLVEKGKYDYLINKKGYYWNYIKNNIKL
SIO_010081: GJU04_RS02195
subclass of: SO_0000673
so part of: GJU04_RS02195
location: 453114..454859
location: region:453114-454859:1
so has part: feature:453114-454859:1:exon

WP_168893255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453114-454859:1:exon

GJU04_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: infA
locus tag: GJU04_RS02200
old locus tag: GJU04_02195
so part of: sequence
location: 454895..455113
location: region:454895-455113:1
so has part: feature:454895-455113:1:exon
subclass of: SO_0000010

position:454895:1
position: 454895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455113:1
position: 455113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454895-455113:1:exon

GJU04_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: infA
locus tag: GJU04_RS02200
old locus tag: GJU04_02195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MSKEENIEMQGVVLNTLPNTIFHVKLENGHIITAHISGKMRKNYIRILTGDKVTVELTPYDLQKGRIIFRSR
SIO_010081: GJU04_RS02200
subclass of: SO_0000673
so part of: GJU04_RS02200
location: 454895..455113
location: region:454895-455113:1
so has part: feature:454895-455113:1:exon

WP_168893256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454895-455113:1:exon

GJU04_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: trxB
locus tag: GJU04_RS02205
old locus tag: GJU04_02200
so part of: sequence
location: complement(455207..456172)
location: region:455207-456172:-1
so has part: feature:455207-456172:-1:exon
subclass of: SO_0000010

position:455207:-1
position: 455207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456172:-1
position: 456172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455207-456172:-1:exon

GJU04_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: trxB
locus tag: GJU04_RS02205
old locus tag: GJU04_02200
EC number: 1.8.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012619502.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
translation: MKNLKKTKLLILGSGPAGYTAAIYAARANLHPIIVTGNHIGGQLTKTFNIENWPGNFPNITGKKLMDQLYNHALYFNTSIINDTIIKIINFDKSPFIVEGNLFRYICNSIIIATGSYPKFLGLDSEKKFIGKGVSSCAVCDGFFYRDKVVAIIGGGNSAIEEALYLGEIASKVHLIHRKNNFTAEKILLKKLKILIKNNKIVLHTPYIVKEILGNNIGVTGIKIYSLSNKNVKILPLYGIFILIGTIPNSVLFKEILKLDKNGYIITNRDKLNNSCFTETNIPGIFAAGDVMDNTYRQAITSSATGCMAALDAQKFLNKNY
SIO_010081: GJU04_RS02205
subclass of: SO_0000673
so part of: GJU04_RS02205
location: complement(455207..456172)
location: region:455207-456172:-1
so has part: feature:455207-456172:-1:exon

WP_168893257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455207-456172:-1:exon

GJU04_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: serS
locus tag: GJU04_RS02210
old locus tag: GJU04_02205
so part of: sequence
location: 456306..457589
location: region:456306-457589:1
so has part: feature:456306-457589:1:exon
subclass of: SO_0000010

position:456306:1
position: 456306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457589:1
position: 457589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456306-457589:1:exon

GJU04_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: serS
locus tag: GJU04_RS02210
old locus tag: GJU04_02205
EC number: 6.1.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070293.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine--tRNA ligase
translation: MLDVKLLRNNIDYVYSILKKKNFFLDINTINQLEKKRKDIQIRIEKLQIKKNQISKILSKKNINNIFELKKKVININKKILKEKIIFNDIKKNINNIYTSIPNLPLNDVPLGKNSKGNKEIKKWGEKNKYNFTIRDHVELGYLNKGIDLEAGVNLSGSKFFVLKGLIAYLYRILIQFMLNTHIINHNYTEVYVPYIVNKRALYGTGQLPKFSKDLLHIKNFKNSDICEEFLIPTAEVPLTNLVYNKIIEEKNLPIKLVAHSPCFRSEVGSYGKYNKGLIRTHQFDKVELVQLVKPKNSIIALEQITDHAEKILQLLKLPYRKVLLCTGDMSFASSKTYDLEVWFPSKNKYYEISSCSNMWDFQSRRIKARYRRITDKKIEFIHTLNGSGLAIGRTLAAIMENYQLKNGNIKIPKILRTYMNGLKYIR
SIO_010081: GJU04_RS02210
subclass of: SO_0000673
so part of: GJU04_RS02210
location: 456306..457589
location: region:456306-457589:1
so has part: feature:456306-457589:1:exon

WP_168893258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456306-457589:1:exon

GJU04_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: argR
locus tag: GJU04_RS02215
old locus tag: GJU04_02210
so part of: sequence
location: complement(457614..458093)
location: region:457614-458093:-1
so has part: feature:457614-458093:-1:exon
subclass of: SO_0000010

position:457614:-1
position: 457614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458093:-1
position: 458093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457614-458093:-1:exon

GJU04_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: argR
locus tag: GJU04_RS02215
old locus tag: GJU04_02210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004093684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator ArgR
translation: MNLISTKKKEANLIKIFKNLIKQEKFSTQIEIVRALQEEGFNNINQSKVSRMLTKFGAVRIRNTKMEMVYCFPLELGVPNTTSPLKNLVLDIDYNDILIIIHTSPGAAQLIARLLDSLGKSEGILGTIAGDDTIFVVPTRLFKTIHLYNSIQNLFEQKF
SIO_010081: GJU04_RS02215
subclass of: SO_0000673
so part of: GJU04_RS02215
location: complement(457614..458093)
location: region:457614-458093:-1
so has part: feature:457614-458093:-1:exon

WP_168893259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457614-458093:-1:exon

GJU04_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplM
locus tag: GJU04_RS02220
old locus tag: GJU04_02215
so part of: sequence
location: 458313..458735
location: region:458313-458735:1
so has part: feature:458313-458735:1:exon
subclass of: SO_0000010

position:458313:1
position: 458313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458735:1
position: 458735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458313-458735:1:exon

GJU04_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplM
locus tag: GJU04_RS02220
old locus tag: GJU04_02215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354394.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MSILLKKKIHRQWHLVNAKNKILGRLSSIIAYYLMGKHKISYLPYTDIGDYIIIINANKIKITGNKKKNKFYFNHSGYSGGLKKISFEKLIKKNPCKIIQHSVKGMLPKNKIGILMLKRLKIYSSSTHKHMAQKQSILNI
SIO_010081: GJU04_RS02220
subclass of: SO_0000673
so part of: GJU04_RS02220
location: 458313..458735
location: region:458313-458735:1
so has part: feature:458313-458735:1:exon

WP_168893260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458313-458735:1:exon

GJU04_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpsI
locus tag: GJU04_RS02225
old locus tag: GJU04_02220
so part of: sequence
location: 458760..459158
location: region:458760-459158:1
so has part: feature:458760-459158:1:exon
subclass of: SO_0000010

position:458760:1
position: 458760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459158:1
position: 459158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458760-459158:1:exon

GJU04_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpsI
locus tag: GJU04_RS02225
old locus tag: GJU04_02220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MKKTNYDYNATGRRKSSSSRVFIKKGNGNILINKKSINIFFSRKTYHFMIMKPLELIKMNNKLDLYITVKGGGTSGQAGAIRHGITRALIKYDNFFRKDLKKAGFVTRDDRKVERKKVGFKKARRSPQFSKR
SIO_010081: GJU04_RS02225
subclass of: SO_0000673
so part of: GJU04_RS02225
location: 458760..459158
location: region:458760-459158:1
so has part: feature:458760-459158:1:exon

WP_168893261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458760-459158:1:exon

GJU04_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: murA
locus tag: GJU04_RS02230
old locus tag: GJU04_02225
so part of: sequence
location: 459279..460535
location: region:459279-460535:1
so has part: feature:459279-460535:1:exon
subclass of: SO_0000010

position:459279:1
position: 459279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460535:1
position: 460535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459279-460535:1:exon

GJU04_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: murA
locus tag: GJU04_RS02230
old locus tag: GJU04_02225
EC number: 2.5.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091934.1
GO function: GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
translation: MGKFIIKGPVKLKGEINISGSKNAALPILFASLLIKEVIEIKNIPKLKDIDIVIKLFLHLGVKIKNGKSLIINASNLHTDFNFPQNLIKSIRASIWLVSPLLVRLKKIHMSLPGGCSIGMRPIDLHIKYLQKLGANIYIKNNCIIASIDKKFKGSHIIMEKNSVGATISIILAAIYAKNITIIDNAAKEPEIKDLINFLNIMGAKIKGAGTKKIIIQGVLKLKGGIYTIMDDRIETGTFLIAAAISKGYIICKNTNPKNLKIVLKKLEYTGAEIKTGKNWCSINMNNKRPKAVNIITGPYPNFPTDMQPQFTLLNCISSGYSIVQETIFENRFLYIHQLNKMGAKILIDNNKVFCQGVTSLYSSTMKATDLRASISLVLAACIATGITTIDNIDYIDRGYENIEKKLISLGAKIKRIK
SIO_010081: GJU04_RS02230
subclass of: SO_0000673
so part of: GJU04_RS02230
location: 459279..460535
location: region:459279-460535:1
so has part: feature:459279-460535:1:exon

WP_168893262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459279-460535:1:exon

GJU04_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rplU
locus tag: GJU04_RS02235
old locus tag: GJU04_02230
so part of: sequence
location: 460633..460950
location: region:460633-460950:1
so has part: feature:460633-460950:1:exon
subclass of: SO_0000010

position:460633:1
position: 460633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460950:1
position: 460950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460633-460950:1:exon

GJU04_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rplU
locus tag: GJU04_RS02235
old locus tag: GJU04_02230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516427.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L21
translation: MYAVFDSCGKQYKVVQGQTIKVEKMIGNIGDKIEFKNVLIIYDKNQINIGNPIIPGAKIIAQLILHGKNKKIKIIKFRRRKHYRKTQGHRQLFTDIKILKIQYLI
SIO_010081: GJU04_RS02235
subclass of: SO_0000673
so part of: GJU04_RS02235
location: 460633..460950
location: region:460633-460950:1
so has part: feature:460633-460950:1:exon

WP_168893263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460633-460950:1:exon

GJU04_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: rpmA
locus tag: GJU04_RS02240
old locus tag: GJU04_02235
so part of: sequence
location: 460961..461218
location: region:460961-461218:1
so has part: feature:460961-461218:1:exon
subclass of: SO_0000010

position:460961:1
position: 460961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461218:1
position: 461218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460961-461218:1:exon

GJU04_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: rpmA
locus tag: GJU04_RS02240
old locus tag: GJU04_02235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015818156.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L27
translation: MAHKKAGGSSRNGRDSHSKRLGIKCFGGEKVKPGYILIRQRGTKFHAGDNVGCGKDHTLFSKIHGTVKFTNKGIKKKKYINIMII
SIO_010081: GJU04_RS02240
subclass of: SO_0000673
so part of: GJU04_RS02240
location: 460961..461218
location: region:460961-461218:1
so has part: feature:460961-461218:1:exon

WP_168893264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460961-461218:1:exon

GJU04_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 2675779
gene: obgE
locus tag: GJU04_RS02245
old locus tag: GJU04_02240
so part of: sequence
location: 461293..462312
location: region:461293-462312:1
so has part: feature:461293-462312:1:exon
subclass of: SO_0000010

position:461293:1
position: 461293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462312:1
position: 462312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461293-462312:1:exon

GJU04_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675779
gene: obgE
locus tag: GJU04_RS02245
old locus tag: GJU04_02240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672628.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase ObgE
translation: MKFFDEAIIYIKAGKGGNGCISFHHAKFIPKGGPDGGNGGKGGDIYFISDNNINNLNNFHRKNNYISQDGFKGQNYQCTGKNGKNLFIRVPIGTNIIDIKKNIIIISLKKNKQVFLAAKGGNGGLGNINFKSSINRTPYKRTEGVLGEKKKIKLEFIIKADVSVLGLPNSGKSTFIEKISSAKTKTGDYFFTTTKPILGIIKNKLNNSFISILDVPSIINKSSLGKGLGLSFIKHFKYCNLLLHFIDVSLINIKNNLSLSNIINIINYEIKKYDKKILLKEQWLILNKIDLLYNKDDLIYYSKKILKEYKFISKFYFISSKKNIGIKKLSLDLLKYLNK
SIO_010081: GJU04_RS02245
subclass of: SO_0000673
so part of: GJU04_RS02245
location: 461293..462312
location: region:461293-462312:1
so has part: feature:461293-462312:1:exon

WP_168893265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461293-462312:1:exon