Sulfuriferula nivalis strain SGTM plasmid SGTM_pl2, complete sequence.
type: Entry
definition: Sulfuriferula nivalis strain SGTM plasmid SGTM_pl2, complete sequence.
sequence version: NZ_AP021883.1
sequence date: 2022-12-31
sequence: sequence
division: CON
label: NZ_AP021883.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00179560
keyword: RefSeq
source: Sulfuriferula nivalis
organism: Sulfuriferula nivalis
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; Sulfuricellaceae; Sulfuriferula.
reference: 1
references: 32375939
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP021883.1.\nAnnotated at DFAST https://dfast.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: RS_HGAP_Assembly v. 3\nGenome Coverage :: 255x\nSequencing Technology :: PacBio SMRT\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/31/2022 02:06:52\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,364\nCDSs (total) :: 3,303\nGenes (coding) :: 3,278\nCDSs (with protein) :: 3,278\nGenes (RNA) :: 61\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 4\nPseudo Genes (total) :: 25\nCDSs (without protein) :: 25\nPseudo Genes (ambiguous residues) :: 0 of 25\nPseudo Genes (frameshifted) :: 5 of 25\nPseudo Genes (incomplete) :: 21 of 25\nPseudo Genes (internal stop) :: 1 of 25\nPseudo Genes (multiple problems) :: 2 of 25\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 28585
topology: circular
so has quality: SO_0000988
location: 1..28585
location: region:1-28585:1
RO_0002162: 2675298

NZ_AP021883
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00179560
type: BioSample
SIO_000068: biosample

1
title: Sulfuriferula nivalis sp. nov., a sulfur oxidizer isolated from snow and emended description of Sulfuriferula plumbiphila
author: Kojima, H.
author: Mochizuki, J.
author: Fukui, M.
journal: Int J Syst Evol Microbiol
volume: 70
issue: 5
pages: 3273-3277
year: 2020
pubmed: 32375939
comments: DOI:10.1099/ijsem.0.004166

32375939
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Kojima, H.
author: Fukui, M.
journal: Submitted (19-NOV-2019) Contact:Hisaya Kojima Hokkaido University; Kita-19, Nishi-8, Kita-ku, Sapporo 060-0819, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28585:1
position: 28585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28585:1:source
so part of: sequence
organism: Sulfuriferula nivalis
mol type: genomic DNA
strain: SGTM
isolation source: snow
type material: type strain of Sulfuriferula nivalis
plasmid: SGTM_pl2
country: Japan:Hokkaido, Mt. Asahidake, Lake Sugatami
lat lon: 43.66 N 142.83 E
collection date: 2017-05-17

2675298
type: Taxonomy
SIO_000068: taxonomy

SFSGTM_RS16840
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16840
so part of: sequence
location: join(28521..28585,1..1486)
location: region:1-28585:1
so has part: feature:28521-28585:1:exon
so has part: feature:1-1486:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:28521-28585:1:exon

position:28521:1
position: 28521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1486:1:exon

position:1486:1
position: 1486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SFSGTM_RS16840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018004518.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux transporter outer membrane subunit
translation: MMKSLLKSRIAIRTCYLVVSTIITGCTVGPDFKRPDAPNATGYAPSASISEATAAAPVAKGGSQRFNPQQDVPYDWWTLFRSPQINALVERAFKANPNIASAQAALRQAQQSVIAQKGFFYPTVGVSYSPSRNKLAGNMGGNSPGQQNNGNVIQTGSNPAGPVYNSPVYYNFHIAQLNVGYVPDVFGLNSRMVESAQTQVEIQKLQLEATYITLASNVVAAAIQEASLRSQIASMEKIVSINRETLDILKTQYKLGDVSSVDVAAQASVLSAMEQALAPLQAQLQQTRDLMRALVGNTPDVDVDEKLELSDLHLPAELPLSLPSRIVEQRPDVRAAEEQMHFASAQAGVAIANRLPQFALTATIGGMADSPAWMFRYGGDFFNLVANVSQTIFDGGTLKARSRAAEQALIGAGAQYRSTVIAALQNVADTLYTIQSDANVLKAAATGAQAAQTTVELTRKQYQLGAVSYQAQLAAEQNNQIAMINLTQAQASRLGVTVALYQALGGGWWNGSPGQF
SIO_010081: SFSGTM_RS16840
subclass of: SO_0000673
so part of: SFSGTM_RS16840
location: join(28521..28585,1..1486)
location: region:1-28585:1
so has part: feature:28521-28585:1:exon
so has part: feature:1-1486:1:exon

WP_232526107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28521-28585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1486:1:exon

SFSGTM_RS16845
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16845
old locus tag: SFSGTM_32590
so part of: sequence
location: 1535..2293
location: region:1535-2293:1
so has part: feature:1535-2293:1:exon
subclass of: SO_0000010

position:1535:1
position: 1535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2293:1
position: 2293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535-2293:1:exon

SFSGTM_RS16845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16845
old locus tag: SFSGTM_32590
inference: COORDINATES: protein motif:HMM:NF024880.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MQKSDTIIYRHCPQCNTDNKSTDNVGYDTDGWNLKKCPSCKFVYLDSAPVYKELQDGEFAWEKTTAARTDTRQKKYRLWHNLSKATHWRLYIFKKKNMYDLLNDHMDSGTVLDLGCGKGHSLLPLPESYKVIGIEISVFEAKCATEVLAKRNGLVINKPSLHGLKTLDENSISAVFSRSYLEHETHPKEVLEEVYRALHKSGIAIIKVPNYGCINRIVMGSKWCGFRFPDHLNYFTPTTLTNMALNAGFEPR
SIO_010081: SFSGTM_RS16845
subclass of: SO_0000673
so part of: SFSGTM_RS16845
location: 1535..2293
location: region:1535-2293:1
so has part: feature:1535-2293:1:exon

WP_162086442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1535-2293:1:exon

SFSGTM_RS16850
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16850
old locus tag: SFSGTM_32600
so part of: sequence
location: 2540..3766
location: region:2540-3766:1
so has part: feature:2540-3766:1:exon
subclass of: SO_0000010

position:2540:1
position: 2540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766:1
position: 3766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2540-3766:1:exon

SFSGTM_RS16850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16850
old locus tag: SFSGTM_32600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019897592.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MTAAKALPADLIDSLLSGYQKPEDLIGEHGLLKQLTKALVERALEAEMEAHLGHGKHEAVTNPARNTRNGKSSKTLKGEFGELPIDIPRDRHSSFEPQLIPKHQTRWNGFDEKILSLYARGMTVREIQSHLEEMYGAEVSPSLISSVTDAVSDEVKLWQSRSLDALYPIVYMDCIHVKVRDTGTVRTKAVYLALGINLAGEKELLGIWIAQTEGAKFWLQVVTELKNRGVQDIFIACVDGLKGFPEAIETIYPKTAVQLCIVHMVRYSLNYVSWKLRKEVADALRAVYTSATVEEAEQQLDEFEQQWGADYPSIVRSWRSNWARIIPFFDYPPEIRKVIYTTNAIESVNMSLRKITKNRGSFPSDEALLKLFYLALLNISKKWTMPIRDWKAALNRFNIQFEDRMPQQ
SIO_010081: SFSGTM_RS16850
subclass of: SO_0000673
so part of: SFSGTM_RS16850
location: 2540..3766
location: region:2540-3766:1
so has part: feature:2540-3766:1:exon

WP_162086443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2540-3766:1:exon

SFSGTM_RS16855
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
gene: mgtA
locus tag: SFSGTM_RS16855
old locus tag: SFSGTM_32610
so part of: sequence
location: complement(3961..6726)
location: region:3961-6726:-1
so has part: feature:3961-6726:-1:exon
subclass of: SO_0000010

position:3961:-1
position: 3961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6726:-1
position: 6726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3961-6726:-1:exon

SFSGTM_RS16855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
gene: mgtA
locus tag: SFSGTM_RS16855
old locus tag: SFSGTM_32610
EC number: 7.2.2.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011062359.1
GO function: GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO process: GO:0015693 - magnesium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium-translocating P-type ATPase
translation: MNLNLLKEFFAGFLLSRRVARHFRRLALLDTLAQTGISREVPPTLAQTLVAAARSDADALFNMLDTHADGLSESQAEAIRERVGLNEVEHEKPLPWWMHLWYCYKNPFNLLLTLLAVVSYVTEDMKATTVISTMVVLSTLLRFWQETKSNKAADALKAMVSNTATVMRRHVSKDAAEDAQKYFDVVLHPKPAQRVEVPLKLLVPGDVIVLSAGDMIPADCRLLTAKDLFVAQAAMTGESMPVEKFAELRDSKAISPLELDNILFMGTNVVSGAAMAVIIATGNQTYFGALATRVTATDRAPTAFQSGVNKVSWLLIRFMFVMAPLVLFINGFTKGDWMEALLFALSVAVGLTPEMLPMIVTSTLAKGAVILSRKKVIVKRLDAIQNFGAMDVLCTDKTGTLTQDKIFLSRHTDVWGQESDDVLEMAYLNSYYQTGLKNLLDVAVLEHVDVHKELNPASNYRKVDEIPFDFTRRRMSVVVSEREDHHELICKGAVEEVLSVCTQVRHGEAVEPLTPELLARIRAVTADLNEEGLRVVAVAAKELPPRKDVYGLTDERELTLIGYVAFLDPPKESTAPALLALAEHGVSVKVLTGDNELVTAKICREVGLEQQGILLGNDIERMSDTELAKVVETHNVFARLTPAHKERIVRMLKNNGHVVGFMGDGINDAPALRAADIGISVDTAVDIAKEAADIILLEKSLMVLEEGVLEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFIPFLPMLPLQLLTQNLLYDISQIAIPFDNVDEELLKKPQRWQPSDVGRFMVFFGPISSIFDISTFVLMWFVFGANTVAKQTLFQSGWFVVGLLTQTLIVHMIRTPKIPFIQSRAATPLMVMTGIIMAIGIFLPMGPLAHYFKLQALPPLYFVFLPMILLAYMGLTQAMKDFYIRRYGWQ
SIO_010081: SFSGTM_RS16855
subclass of: SO_0000673
so part of: SFSGTM_RS16855
location: complement(3961..6726)
location: region:3961-6726:-1
so has part: feature:3961-6726:-1:exon

WP_162086444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3961-6726:-1:exon

SFSGTM_RS16860
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16860
old locus tag: SFSGTM_32620
so part of: sequence
location: 7298..7567
location: region:7298-7567:1
so has part: feature:7298-7567:1:exon
subclass of: SO_0000010

position:7298:1
position: 7298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7567:1
position: 7567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7298-7567:1:exon

SFSGTM_RS16860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16860
old locus tag: SFSGTM_32620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008952712.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-sensing transcriptional repressor
translation: MKKITAHLGVIKRLKRAQGHLKSTLAMLEEGRSCLEITQQLQAVEKAIGNAKKTLVHDHIDHCLGSAAHEESGNVDDAIDELREITKYL
SIO_010081: SFSGTM_RS16860
subclass of: SO_0000673
so part of: SFSGTM_RS16860
location: 7298..7567
location: region:7298-7567:1
so has part: feature:7298-7567:1:exon

WP_162086445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7298-7567:1:exon

SFSGTM_RS16865
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16865
old locus tag: SFSGTM_32630
so part of: sequence
location: 7828..8118
location: region:7828-8118:1
so has part: feature:7828-8118:1:exon
subclass of: SO_0000010

position:7828:1
position: 7828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8118:1
position: 8118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7828-8118:1:exon

SFSGTM_RS16865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16865
old locus tag: SFSGTM_32630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001247892.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MRPSLVLDLKRSAIREAVSRFRAVNPRIFGSVLHGTDLDGSDLDLLVDALPGATLFGLGGLQDELESLLGVHVDLLTPSDLPLKFRAKVLAEAQPV
SIO_010081: SFSGTM_RS16865
subclass of: SO_0000673
so part of: SFSGTM_RS16865
location: 7828..8118
location: region:7828-8118:1
so has part: feature:7828-8118:1:exon

WP_162086446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7828-8118:1:exon

SFSGTM_RS16870
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16870
old locus tag: SFSGTM_32640
so part of: sequence
location: 8115..8402
location: region:8115-8402:1
so has part: feature:8115-8402:1:exon
subclass of: SO_0000010

position:8115:1
position: 8115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8402:1
position: 8402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8115-8402:1:exon

SFSGTM_RS16870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16870
old locus tag: SFSGTM_32640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012382731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF86 domain-containing protein
translation: MNENRLTDYLDHMQRAAIMSLIIIGDEGDGQLAEFTQKHAQVPWRNMRGMHNRIAHGYFDINLDVVWDTVQTALPALLKQLQTIRCDANDQGSSC
SIO_010081: SFSGTM_RS16870
subclass of: SO_0000673
so part of: SFSGTM_RS16870
location: 8115..8402
location: region:8115-8402:1
so has part: feature:8115-8402:1:exon

WP_162086447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8115-8402:1:exon

SFSGTM_RS16875
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16875
old locus tag: SFSGTM_32650
so part of: sequence
location: 8396..8953
location: region:8396-8953:1
so has part: feature:8396-8953:1:exon
subclass of: SO_0000010

position:8396:1
position: 8396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8953:1
position: 8953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8396-8953:1:exon

SFSGTM_RS16875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16875
old locus tag: SFSGTM_32650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019897068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSTQDQNLDLQVDALTKAGCKKLFDDKISGNSKERPGLTKALEMLREGDALVVWKLDRLGRSVKNLVDLVSELHKQGIQFKSLTDAIDTGTPSGRFFFHVMASLAEMERELTVERTRAGLEVARKLGRIGGRKRQMTDSKIESAKKLLASGVPPRDVAKNLGVSVPTLYRWVPASAYA
SIO_010081: SFSGTM_RS16875
subclass of: SO_0000673
so part of: SFSGTM_RS16875
location: 8396..8953
location: region:8396-8953:1
so has part: feature:8396-8953:1:exon

WP_162086448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8396-8953:1:exon

SFSGTM_RS16880
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16880
so part of: sequence
location: 9381..9527
location: region:9381-9527:1
so has part: feature:9381-9527:1:exon
subclass of: SO_0000010

position:9381:1
position: 9381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9527:1
position: 9527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9381-9527:1:exon

SFSGTM_RS16880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLIVFYGGLSIAGMMALGYTLYVYRKHQHSRKRRIERQDAALKQLL
SIO_010081: SFSGTM_RS16880
subclass of: SO_0000673
so part of: SFSGTM_RS16880
location: 9381..9527
location: region:9381-9527:1
so has part: feature:9381-9527:1:exon

WP_162086449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9381-9527:1:exon

SFSGTM_RS16885
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16885
old locus tag: SFSGTM_32660
so part of: sequence
location: 9583..9840
location: region:9583-9840:1
so has part: feature:9583-9840:1:exon
subclass of: SO_0000010

position:9583:1
position: 9583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9840:1
position: 9840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9583-9840:1:exon

SFSGTM_RS16885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16885
old locus tag: SFSGTM_32660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014028940.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin
translation: MHTTTLRKVGGSIMLAVPAGFLERLHLQAGATVSLVVEQGSLVVNPGMRPRYTLAELLAACDVAKPVSTEEREWLDAPLVGDELM
SIO_010081: SFSGTM_RS16885
subclass of: SO_0000673
so part of: SFSGTM_RS16885
location: 9583..9840
location: region:9583-9840:1
so has part: feature:9583-9840:1:exon

WP_162086450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9583-9840:1:exon

SFSGTM_RS16890
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16890
old locus tag: SFSGTM_32670
so part of: sequence
location: 9905..10492
location: region:9905-10492:1
so has part: feature:9905-10492:1:exon
subclass of: SO_0000010

position:9905:1
position: 9905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10492:1
position: 10492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9905-10492:1:exon

SFSGTM_RS16890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16890
old locus tag: SFSGTM_32670
inference: COORDINATES: protein motif:HMM:NF013555.2
GO component: GO:0005694 - chromosome [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: topoisomerase DNA-binding C4 zinc finger domain-containing protein
translation: MSNDKKSKIVHLNVNSATAAYAKRHGAEFKKERGLFFVGDDVPVELEEFIVSEPRIRSHNAVVKCPKCGSQMKLTPTRSGGVFWSCLMFPKCQGARSAEDDDVDSEVKHISDFDVLKTTPQKLNKLDSAKPNNSNDDKMIAAKIAEVASKKLGSVTAVNKWFNTPKLALSGRRSSDLDLTDMAEKKRILQMLLAL
SIO_010081: SFSGTM_RS16890
subclass of: SO_0000673
so part of: SFSGTM_RS16890
location: 9905..10492
location: region:9905-10492:1
so has part: feature:9905-10492:1:exon

WP_162086451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9905-10492:1:exon

SFSGTM_RS16895
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16895
old locus tag: SFSGTM_32680
so part of: sequence
location: 10596..11225
location: region:10596-11225:1
so has part: feature:10596-11225:1:exon
subclass of: SO_0000010

position:10596:1
position: 10596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11225:1
position: 11225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10596-11225:1:exon

SFSGTM_RS16895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16895
old locus tag: SFSGTM_32680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798610.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MKVIAVLNQKGGSGKTTIATHLARAFQFDGSSVVLIDSDPQGSARDWSAARDEQPLSVIGIDRPTIERDLKSLAKTDYAVIDGAPQAADLAVSAIKAANFVLIPVQPSPYDIWAAADLVELVKQRIEVTDGKLQAAFVVSRAIHGTKLGQEVGDALNGYGLPVLNTRIAQRVIYPGTAATGGTAFDSEPDGDAARDFILLKNEIEQLLK
SIO_010081: SFSGTM_RS16895
subclass of: SO_0000673
so part of: SFSGTM_RS16895
location: 10596..11225
location: region:10596-11225:1
so has part: feature:10596-11225:1:exon

WP_162086452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10596-11225:1:exon

SFSGTM_RS16900
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16900
old locus tag: SFSGTM_32690
so part of: sequence
location: 11245..11445
location: region:11245-11445:1
so has part: feature:11245-11445:1:exon
subclass of: SO_0000010

position:11245:1
position: 11245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11445:1
position: 11445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11245-11445:1:exon

SFSGTM_RS16900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16900
old locus tag: SFSGTM_32690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004845038.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MVKTTGLSAGRPSASKAKFSMADEVELSRINAQVTSDEHQKLKMYCVKHKTSITDLVRKMIAALPE
SIO_010081: SFSGTM_RS16900
subclass of: SO_0000673
so part of: SFSGTM_RS16900
location: 11245..11445
location: region:11245-11445:1
so has part: feature:11245-11445:1:exon

WP_162086453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11245-11445:1:exon

SFSGTM_RS16905
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16905
old locus tag: SFSGTM_32700
so part of: sequence
location: 11548..11940
location: region:11548-11940:1
so has part: feature:11548-11940:1:exon
subclass of: SO_0000010

position:11548:1
position: 11548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11940:1
position: 11940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11548-11940:1:exon

SFSGTM_RS16905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16905
old locus tag: SFSGTM_32700
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFIMGHEAETKPVLTGTQKVNLAITAGVIGLLVATHGHKLLSAHAYAVVLSVIAFTVIALLLKAIPARAAKKITEATNYTPAAQEIQESESELLSCNPLSEPSDDIFAVGPGMSISLQDYLHPYSYYNY
SIO_010081: SFSGTM_RS16905
subclass of: SO_0000673
so part of: SFSGTM_RS16905
location: 11548..11940
location: region:11548-11940:1
so has part: feature:11548-11940:1:exon

WP_162086454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11548-11940:1:exon

SFSGTM_RS16910
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16910
old locus tag: SFSGTM_32710
so part of: sequence
location: complement(11948..12181)
location: region:11948-12181:-1
so has part: feature:11948-12181:-1:exon
subclass of: SO_0000010

position:11948:-1
position: 11948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12181:-1
position: 12181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11948-12181:-1:exon

SFSGTM_RS16910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16910
old locus tag: SFSGTM_32710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMPLVPPPVRVGAAVLGAGLYAADHPEAVKTAWDLATTEKTSLMGTNDDLNKMLENQKQKNGDTGTVSLMGIPVPRN
SIO_010081: SFSGTM_RS16910
subclass of: SO_0000673
so part of: SFSGTM_RS16910
location: complement(11948..12181)
location: region:11948-12181:-1
so has part: feature:11948-12181:-1:exon

WP_162086455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11948-12181:-1:exon

SFSGTM_RS16915
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16915
old locus tag: SFSGTM_32720
so part of: sequence
location: complement(12269..12589)
location: region:12269-12589:-1
so has part: feature:12269-12589:-1:exon
subclass of: SO_0000010

position:12269:-1
position: 12269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12589:-1
position: 12589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12269-12589:-1:exon

SFSGTM_RS16915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16915
old locus tag: SFSGTM_32720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008344173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MILVWLPSADVTRYLQLDYIANDNPLAAIEQDIEIENQVDLLLEQPNMGRPGRVVTTRELVIGRTSFIVAYRIKNQRIEILRVLHGSQQWPKNMKAMLEVPKIDLQ
SIO_010081: SFSGTM_RS16915
subclass of: SO_0000673
so part of: SFSGTM_RS16915
location: complement(12269..12589)
location: region:12269-12589:-1
so has part: feature:12269-12589:-1:exon

WP_232526108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12269-12589:-1:exon

SFSGTM_RS16920
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16920
old locus tag: SFSGTM_32730
so part of: sequence
location: complement(12586..13059)
location: region:12586-13059:-1
so has part: feature:12586-13059:-1:exon
subclass of: SO_0000010

position:12586:-1
position: 12586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13059:-1
position: 13059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12586-13059:-1:exon

SFSGTM_RS16920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16920
old locus tag: SFSGTM_32730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007586016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGTNSDTIDQNTLMHLVEAGAVHGASIIGQPGGWGVVIQYGMTERALAAKRGSVRNFARFETLVGYLKKMGIAKYQVDATEYDPTTIKEERFRENAAERMRHAHEAAAHDKWFRTQIEQALQEADDPATVWLSNEEVKMQSAKRRAEWSKRALRSAI
SIO_010081: SFSGTM_RS16920
subclass of: SO_0000673
so part of: SFSGTM_RS16920
location: complement(12586..13059)
location: region:12586-13059:-1
so has part: feature:12586-13059:-1:exon

WP_232526109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12586-13059:-1:exon

SFSGTM_RS16925
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16925
old locus tag: SFSGTM_32750
so part of: sequence
location: complement(13385..13939)
location: region:13385-13939:-1
so has part: feature:13385-13939:-1:exon
subclass of: SO_0000010

position:13385:-1
position: 13385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13939:-1
position: 13939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13385-13939:-1:exon

SFSGTM_RS16925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16925
old locus tag: SFSGTM_32750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: replication/maintenance protein RepL
translation: MTVEQKNLKARYEVNPLVQPKEIIMKERTVKVGSSRDLIDPDSGEIHAVNAIYQRKIVDSERFAKIYLDGLAKTFGLTKTAQRVFQSILQLCEKDSDSIWLNFMLISKVDNEIPESTFYRGLRELLKHEFVAHSDIPNKFWINPHLFFNGDRVRFITEYVKGTAIKDDAERTKIEEKGQKRLID
SIO_010081: SFSGTM_RS16925
subclass of: SO_0000673
so part of: SFSGTM_RS16925
location: complement(13385..13939)
location: region:13385-13939:-1
so has part: feature:13385-13939:-1:exon

WP_162086457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13385-13939:-1:exon

SFSGTM_RS17255
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS17255
old locus tag: SFSGTM_32760
so part of: sequence
location: 14829..14957
location: region:14829-14957:1
so has part: feature:14829-14957:1:exon
subclass of: SO_0000010

position:14829:1
position: 14829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14957:1
position: 14957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14829-14957:1:exon

SFSGTM_RS17255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS17255
old locus tag: SFSGTM_32760
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAINSLIGLVAATLILLVIAIYANTHRAEDHKKKQNIQENNE
SIO_010081: SFSGTM_RS17255
subclass of: SO_0000673
so part of: SFSGTM_RS17255
location: 14829..14957
location: region:14829-14957:1
so has part: feature:14829-14957:1:exon

WP_269780114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14829-14957:1:exon

SFSGTM_RS16930
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16930
old locus tag: SFSGTM_32770
so part of: sequence
location: complement(15520..16077)
location: region:15520-16077:-1
so has part: feature:15520-16077:-1:exon
subclass of: SO_0000010

position:15520:-1
position: 15520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16077:-1
position: 16077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15520-16077:-1:exon

SFSGTM_RS16930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16930
old locus tag: SFSGTM_32770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010110092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSTQDQNLDLQIDALTKAGCTKLFDDKISGSSRERLGLTKALDMLREGDTLVVWKLDRLGRSVKNLVDLVSDLHKQGVQFKSLTDAIDTGTPSGRFFFHVMASLAEMERELTVERTRAGLEVARKLGRTGGRKRKMTDSKIESAKKLLANGVPPCDVAHNLGVSVPTLYRWIPASGTA
SIO_010081: SFSGTM_RS16930
subclass of: SO_0000673
so part of: SFSGTM_RS16930
location: complement(15520..16077)
location: region:15520-16077:-1
so has part: feature:15520-16077:-1:exon

WP_162084758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15520-16077:-1:exon

SFSGTM_RS16935
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16935
old locus tag: SFSGTM_32780
so part of: sequence
location: complement(16122..16403)
location: region:16122-16403:-1
so has part: feature:16122-16403:-1:exon
subclass of: SO_0000010

position:16122:-1
position: 16122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16403:-1
position: 16403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16122-16403:-1:exon

SFSGTM_RS16935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16935
old locus tag: SFSGTM_32780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: virulence factor
translation: MYAVSFDLTVADAEMNHPKGVSQAYTEIGAILGEHGFRRVQGSLYVTDNEDMANLFLAFQTLRARPWFPKSVRDIRAFRIEQWSDFTAVVKGV
SIO_010081: SFSGTM_RS16935
subclass of: SO_0000673
so part of: SFSGTM_RS16935
location: complement(16122..16403)
location: region:16122-16403:-1
so has part: feature:16122-16403:-1:exon

WP_162084759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16122-16403:-1:exon

SFSGTM_RS16940
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16940
old locus tag: SFSGTM_32790
so part of: sequence
location: complement(16403..16603)
location: region:16403-16603:-1
so has part: feature:16403-16603:-1:exon
subclass of: SO_0000010

position:16603:-1
position: 16603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16403-16603:-1:exon

SFSGTM_RS16940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16940
old locus tag: SFSGTM_32790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005369979.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5397 domain-containing protein
translation: MQAVTTAPPIPTGKIKSFGAFGPKYEVGKPLRQLDDGDWMVEVKMVETGESAEYRLTHVYDDPEAR
SIO_010081: SFSGTM_RS16940
subclass of: SO_0000673
so part of: SFSGTM_RS16940
location: complement(16403..16603)
location: region:16403-16603:-1
so has part: feature:16403-16603:-1:exon

WP_162084760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16403-16603:-1:exon

SFSGTM_RS16945
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16945
old locus tag: SFSGTM_32800
so part of: sequence
location: 16762..19740
location: region:16762-19740:1
so has part: feature:16762-19740:1:exon
subclass of: SO_0000010

position:16762:1
position: 16762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19740:1
position: 19740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16762-19740:1:exon

SFSGTM_RS16945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16945
old locus tag: SFSGTM_32800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_021138877.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRSILSANERESLLAIPTAGDELIRLYTFSEVDLALIRQHRGAQNRLGFAVQLCYMRYPGILLGVDAEPSAHLLNMVANELKVPREAWNDYGHQRAETRREHLLELQAAYEFQSFTTLSHYRAAVHSLGELALQIDKGIVLASVLAESLRSKGVLLPTVDVIERICAEAITRANKCIYAALSDQLTRAHRQRLDELLLHKEGSKTTKLAWLRLSPKKPNSRHMLEHIERLKSWQALDLPASVEHVVHQNRLLKIAREGGQMRAFDLAKFEPQRRYATLVALAIEGMATVIDEIIDLHDRIIGKLFNAAKNKHQQQFQASGKAINDKVCLYSRIGLALIEAKKTGADPFAAIESVLPWEDFAESVSEAQVLAQPESFDFLHRMGDGYATLRRYAPEFLNVLKLRAAPAAKDVLEAIEALRLMNSSNAKQVPADAPSKFITPRWARLVKTSNGFDRRFYELCALSELKNKLRSGDVWVQGSRQFKNFNEYLVPVEKFTTMQLADELPLAVPTDCDQYLHERLTLLESQLAKANLMALANELPDAIITTATGLKITPLDAVVPDEAQALIDQSAALLPHIKITELLMEVDGWTGFTNHFTHLKSGDVAKDKTLLMTTLLADGINLGLSKMAESCPGTTYTKLAWLQAWHIRDETYNAALANLVNTQFRQPFADHWGDGTTSSSDGQNFRVGSKAQSTGHVNPKYGSEPGRTFYTHISDQYAPFSTKVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMPFVGFRFAPRIRDLGETKLFIPKGDTVYDGLKPMISGERLKIKQIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVNAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATATLRNHGQEVDTLLLQYLSPLGWEHINLTGDYVWRSSAKIGAGKFRPLRPMPGA
SIO_010081: SFSGTM_RS16945
subclass of: SO_0000673
so part of: SFSGTM_RS16945
location: 16762..19740
location: region:16762-19740:1
so has part: feature:16762-19740:1:exon

WP_162084761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16762-19740:1:exon

SFSGTM_RS16955
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16955
old locus tag: SFSGTM_32820
so part of: sequence
location: complement(21357..21743)
location: region:21357-21743:-1
so has part: feature:21357-21743:-1:exon
subclass of: SO_0000010

position:21357:-1
position: 21357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21743:-1
position: 21743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21357-21743:-1:exon

SFSGTM_RS16955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16955
old locus tag: SFSGTM_32820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSSDWIELNKFGAETSIKFLKKSTVVGVEVRQEQSYVTVHIETEKATIIYARFDGMTKEVMTKARTEAQFLLAEICRSGFNKPREYADFPPLVGESESEYEARSKIDAVTYRHQNRDFPEFYLSRED
SIO_010081: SFSGTM_RS16955
subclass of: SO_0000673
so part of: SFSGTM_RS16955
location: complement(21357..21743)
location: region:21357-21743:-1
so has part: feature:21357-21743:-1:exon

WP_162086458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21357-21743:-1:exon

SFSGTM_RS16960
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16960
old locus tag: SFSGTM_32830
so part of: sequence
location: complement(21797..22678)
location: region:21797-22678:-1
so has part: feature:21797-22678:-1:exon
subclass of: SO_0000010

position:21797:-1
position: 21797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22678:-1
position: 22678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21797-22678:-1:exon

SFSGTM_RS16960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16960
old locus tag: SFSGTM_32830
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MSKKLPVFKTVDLISAGYRLSSFEQKILLYAICMARETETGLSETTPLTIKATEFSARFGLNDNSIYAQLKSFSEDFYNRDIKFSTAGEFSGVDNRRVRWLSEFGYNDSQGTVSVVFTPRVISEISRIDGRLNPYISYVLNNVCDMHGIYSIRLYEWLMAFKLIGARELTIEFMKESLELGDKYELFTHFRRYVIENSIAEINKCSDIIIDKPKLIKTGRNVTSMVFKFRFKNPDTPAAAKKAKPAKYKPSPARTGESQQQYEDRIRREYAEEEIKRIRDSQLKSLEENDSNK
SIO_010081: SFSGTM_RS16960
subclass of: SO_0000673
so part of: SFSGTM_RS16960
location: complement(21797..22678)
location: region:21797-22678:-1
so has part: feature:21797-22678:-1:exon

WP_162086459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21797-22678:-1:exon

SFSGTM_RS16965
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16965
old locus tag: SFSGTM_32840
so part of: sequence
location: complement(22725..23018)
location: region:22725-23018:-1
so has part: feature:22725-23018:-1:exon
subclass of: SO_0000010

position:22725:-1
position: 22725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23018:-1
position: 23018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22725-23018:-1:exon

SFSGTM_RS16965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16965
old locus tag: SFSGTM_32840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKIAVICAENCGICAENCGICAENCGEKIKICAENCGECAVGVNDSAYMLLCAVGVNDSAYMLLCAVGVNDSAYMLLCAVGVNDSAYMLLCAVGVN
SIO_010081: SFSGTM_RS16965
subclass of: SO_0000673
so part of: SFSGTM_RS16965
location: complement(22725..23018)
location: region:22725-23018:-1
so has part: feature:22725-23018:-1:exon

WP_162086460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22725-23018:-1:exon

SFSGTM_RS16970
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16970
old locus tag: SFSGTM_32850
so part of: sequence
location: 24119..25348
location: region:24119-25348:1
so has part: feature:24119-25348:1:exon
subclass of: SO_0000010

position:24119:1
position: 24119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25348:1
position: 25348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24119-25348:1:exon

SFSGTM_RS16970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16970
old locus tag: SFSGTM_32850
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MTTPIDTNPAQTTSKSLSLKLQLFVVFCIILLLGIIGFVWHRHADKPEVSTDKPAAPGTFRPTNAQMDSLGIAQVQQIDFRGEEITDGTIAYNDDTTTQVFSPYSGQVTRVIAQLGDVVKKGDPLMAIAATEFVQAKSALIAAHAQVALTTAAEARQHELYLAKAGAQKDWLQSQSDLATAQGNLQAVRNQLSILGKSEQEINSIENGAKTSEVNPVVLVKAPVSGTVTQRQVGVGQYIQSASGGTSAPVYTIGNLSSVYMIANVREADAQLVHVGQPVEVRVLALPDRVFKAKLSWVAPAMDVNTHRLAVRAIVDNKDGALKPMMFANFSIVTSTPVKAVGVPQSAVVYEGNEAHVFVANSDGTLAIRPVHIGRASGDFLEITSGLADGEKIVTHGTLFIDRATSGSE
SIO_010081: SFSGTM_RS16970
subclass of: SO_0000673
so part of: SFSGTM_RS16970
location: 24119..25348
location: region:24119-25348:1
so has part: feature:24119-25348:1:exon

WP_162086461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24119-25348:1:exon

SFSGTM_RS16975
type: Gene
subclass of: SO_0000704
RO_0002162: 2675298
locus tag: SFSGTM_RS16975
old locus tag: SFSGTM_32860
so part of: sequence
location: 25348..28524
location: region:25348-28524:1
so has part: feature:25348-28524:1:exon
subclass of: SO_0000010

position:28524:1
position: 28524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25348-28524:1:exon

SFSGTM_RS16975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675298
locus tag: SFSGTM_RS16975
old locus tag: SFSGTM_32860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004273221.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CusA/CzcA family heavy metal efflux RND transporter
translation: MDKVVAFALKQRVAVMLMMATLFIAGVVSFIKLNIEAYPDPVPPLVDIVTQSTGQSAEEIERYITIPLEIQLAGIPHVTTVRTISLFGLSDVKVQFTYDISYKDAEQQVINRLSQLPPLPNGAMPGISPESPIGEILRYRVYGPPGYSVQDLKTIEDWMLERRFKAVPGVIDVNGWGGKTKDYEVSIDQSKLIHYGLTVPQVLQVLNNSNLNVGGQTVNFGAQAAVVRGIGLIHSIDDIRNTMITVSNGTPVLMHDIATISVSNLPRLGIAGNDADNDIVQGIVLMRRGEQSTPTIQRVEAELKNINESGVLPPGVHIERIYDRSELISVTTHTVIENLLFGIVLIFVVQWVFLGNLRSAIIVSATIPFAMFFAIIIMVLRGESANLLSVGAIDFGLIVDATVIMVENIFRHLAESREKSHAEMPRFMLHIRPDSTLHGKLAHIAFAATEVNRSIFFSAAIIIAGFIPLFTLSGVEGHIFGPMASTYAYAIIGGLVATFTIAPALSSLLLPAHVTETETIVVGWMRRVYTPVIGFALANRILTLFCAGILVVMAGFAVHSLGMEFLPKLEEGNMWIRASMPDSISLEESNAYVNRMRTLIKAYPEVKTVISQNGRPDDGTDATGFFNAEFFVPLIPFDTWPKGVDKEKLTDEISAKMQAEFPGVEFNFSQYIEDNVEEASSGVKGQNSVKLYGNDLATLEKTANQIQKVMATVPGITDLSIFRALGQPTVKIDIDRARAARYGLAPGDINATVQAAIGGQAAGNLYEDGSDRNFPIIVRLAQHDRQNLDAIKRITIGAPNPSGNGVVQIPLTDVANVELVSGASFIYREGQERYIPIKFSVRGRDLGGAVMEAQQKVAAQVKIPGGYRMEWVGEFGQMNEAMARLKIVVPLSLGFILLLLFFNFNSITDTLLAASVMPMALIGGIFALYLTGTAFSVSAAIGFIGLFGISVMEGIIVLTYYNQLIETGVDRKQAIIQSCQTRLRPVMMTCNAACVGLLPAAFATGIGSQVQKPLALVVVGGILLAPVLVLIVLPLLIDLFSNRKSPLKIEDTVTTVGV
SIO_010081: SFSGTM_RS16975
subclass of: SO_0000673
so part of: SFSGTM_RS16975
location: 25348..28524
location: region:25348-28524:1
so has part: feature:25348-28524:1:exon

WP_162086462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25348-28524:1:exon