Corynebacterium occultum strain 2039 plasmid pCOCCU, complete sequence.
type: Entry
definition: Corynebacterium occultum strain 2039 plasmid pCOCCU, complete sequence.
sequence version: NZ_CP046456.1
sequence date: 2022-12-23
sequence: sequence
division: CON
label: NZ_CP046456.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN13284899
keyword: RefSeq
source: Corynebacterium occultum
organism: Corynebacterium occultum
taxonomy: Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP046456.1.\nAnnotated using prokka v1.11 from http://www.vicbioinformatics.com.\nBacteria and source DNA available from Kalinowski Lab, CeBiTec,\nBielefeld University, Bielefeld.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.8; canu v. 1.8; unicycler v.\n 0.4.6\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 233.7x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/23/2022 02:48:25\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,916\nCDSs (total) :: 2,837\nGenes (coding) :: 2,805\nCDSs (with protein) :: 2,805\nGenes (RNA) :: 79\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 58\nncRNAs :: 3\nPseudo Genes (total) :: 32\nCDSs (without protein) :: 32\nPseudo Genes (ambiguous residues) :: 0 of 32\nPseudo Genes (frameshifted) :: 14 of 32\nPseudo Genes (incomplete) :: 24 of 32\nPseudo Genes (internal stop) :: 7 of 32\nPseudo Genes (multiple problems) :: 11 of 32\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 108872
topology: circular
so has quality: SO_0000988
location: 1..108872
location: region:1-108872:1
RO_0002162: 2675219

NZ_CP046456
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN13284899
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Corynebacterium kalinowskii 1959, a novel Corynebacterium species isolated from soil of a small paddock in Vilsendorf, Germany
author: Schaffert, L.
author: Ruwe, M.
author: Milse, J.
author: Hanuschka, K.
author: Ortseifen, V.
author: Droste, J.
author: Brandt, D.
author: Schlueter, L.
author: Kutter, Y.
author: Vinke, S.
author: Viehoefer, P.
author: Jacob, L.
author: Luebke, N.-C.
author: Schulte-Berndt, E.
author: Hain, C.
author: Linder, M.
author: Schmidt, P.
author: Wollenschlaeger, L.
author: Luttermann, T.
author: Thieme, E.
author: Hassa, J.
author: Haak, M.
author: Wittchen, M.
author: Mentz, A.
author: Persicke, M.
author: Busche, T.
author: Ruckert, C.
journal: Unpublished

2
title: Direct Submission
author: Schaffert, L.
author: Ruwe, M.
author: Milse, J.
author: Hanuschka, K.
author: Ortseifen, V.
author: Droste, J.
author: Brandt, D.
author: Schlueter, L.
author: Kutter, Y.
author: Vinke, S.
author: Viehoefer, P.
author: Jacob, L.
author: Luebke, N.-C.
author: Schulte-Berndt, E.
author: Hain, C.
author: Linder, M.
author: Schmidt, P.
author: Wollenschlaeger, L.
author: Luttermann, T.
author: Thieme, E.
author: Hassa, J.
author: Haak, M.
author: Wittchen, M.
author: Mentz, A.
author: Persicke, M.
author: Busche, T.
author: Ruckert, C.
journal: Submitted (26-NOV-2019) CeBiTec, Uni Bielefeld, Sequenz 1, Bielefeld 33615, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108872:1
position: 108872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-108872:1:source
so part of: sequence
organism: Corynebacterium occultum
mol type: genomic DNA
strain: 2039
isolation source: soil from a small paddock
type material: type strain of Corynebacterium occultum
plasmid: pCOCCU
country: Germany: Vilsendorf, Bielefeld
lat lon: 52.0814444 N 8.5468611 E
collection date: 2019-04-10
collected by: Johanna Milse
identified by: Christian Ruckert

2675219
type: Taxonomy
SIO_000068: taxonomy

COCCU_RS13995
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS13995
so part of: sequence
location: complement(join(108719..108872,1..1247))
location: region:1-108872:-1
so has part: feature:1-1247:-1:exon
so has part: feature:108719-108872:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108872:-1
position: 108872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1247:-1:exon

position:1247:-1
position: 1247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108719-108872:-1:exon

position:108719:-1
position: 108719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COCCU_RS13995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS13995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011074819.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MQVSHTRNALSVSFDDPNLISTAGLVPIMRLADTAGLTALAEDRLTVPTDKGANPGAKITTLIAGMVAGADSIADMDILRHGGMSTIFNQIYAPSTLGSFLRSCAFGHVRQFDAVASRFLTGLAAQAPNLVPATEGYVFVDVDDTIVEVHGYKKQGAGFGYSGVRGLNALLATVSTQDSAPVIVGQRLRKGSCGSPRGAKRLIGDAVATTRRVPGMDNQKILLRADSAYYGHPSISAAIKAGAEVSVTTRMTSNITQAITQIPDTSWETIEYTDAVFDEGTQRWISSAEVAEIPFTAFTSRKKTDHIPGRLVVRRIPELNKKDIDQPGLFDLYRFHAVFTTADPDILDTVAADKTHRQHAIIEQVNADLKNSALAHMPSGVFTANAAWLVCAVMAFNLTRAAGTIAAGTMARATTSMIRRRLVSIPVRIARSARRLTLHLPDRWRWESQWSRLFDHTHSPPAAAAA
SIO_010081: COCCU_RS13995
subclass of: SO_0000673
so part of: COCCU_RS13995
location: complement(join(108719..108872,1..1247))
location: region:1-108872:-1
so has part: feature:1-1247:-1:exon
so has part: feature:108719-108872:-1:exon

WP_156233115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108719-108872:-1:exon

COCCU_RS14000
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14000
old locus tag: COCCU_14110
so part of: sequence
location: 1500..2297
location: region:1500-2297:1
so has part: feature:1500-2297:1:exon
subclass of: SO_0000010

position:1500:1
position: 1500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297:1
position: 2297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500-2297:1:exon

COCCU_RS14000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14000
old locus tag: COCCU_14110
inference: COORDINATES: protein motif:HMM:NF015995.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIHYGRINESFHQVAAAVVEEVLLRLGHEVVVHEGPHPEMYPKLASGEHQLFADAWLPGGHAMYWADIKDSVTNVAPLYDDAKFFWAVPDYADAAITSLEDLAREEVADTFATRVVQGTGSYAGLTVMGNDLLTTYGLDSLGWEQPSGDIDKVIDTVNTRIAARENFVTPLWQPMFLNEAHDLRPLTDPKGAFPAPDEACLLAHNDFWAECDEHTRAVLQRIRFTTADVNEMDLYVQRDGLDILPAVRRWADNHPGTVEEWLKD
SIO_010081: COCCU_RS14000
subclass of: SO_0000673
so part of: COCCU_RS14000
location: 1500..2297
location: region:1500-2297:1
so has part: feature:1500-2297:1:exon

WP_197088534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1500-2297:1:exon

COCCU_RS14005
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14005
so part of: sequence
location: 2471..2713
location: region:2471-2713:1
so has part: feature:2471-2713:1:exon
subclass of: SO_0000010

position:2471:1
position: 2471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2713:1
position: 2713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2471-2713:1:exon

COCCU_RS14005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAVCSGLLMSAQKMFESGRRHRGQKSATCPLNKGNYDGDIIPGEDLMSFLITDQADVAELAAKETPLAYPGARTASAGH
SIO_010081: COCCU_RS14005
subclass of: SO_0000673
so part of: COCCU_RS14005
location: 2471..2713
location: region:2471-2713:1
so has part: feature:2471-2713:1:exon

WP_156232946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2471-2713:1:exon

COCCU_RS14010
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
gene: catA
locus tag: COCCU_RS14010
old locus tag: COCCU_14120
so part of: sequence
location: complement(2971..3825)
location: region:2971-3825:-1
so has part: feature:2971-3825:-1:exon
subclass of: SO_0000010

position:2971:-1
position: 2971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3825:-1
position: 3825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971-3825:-1:exon

COCCU_RS14010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
gene: catA
locus tag: COCCU_RS14010
old locus tag: COCCU_14120
EC number: 1.13.11.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: catechol 1,2-dioxygenase
translation: MTHSEINPTAKGSGTAATDKFKHEAIKSDTSTERANEIYKDLLAAIADVAHKHEVTYDEYRVLKNWMIQVGEYGEWPLWLDVFVEHEIEKINYNRHHYTGTKGSIEGPYYVENSPELPWKCEMPMREQDKAAQPLIFQGQVTDVDGKGLGGATVELWHADEEGFYSQFAPGIPEWNLRGTIVTNENGEYEIKTLQPAPYQIPADGPTGWFIESYGGHPWRPAHLHLKVKSPGYREITTQLYFQGGEWIDNDVATAVKPELLLDPQTDADSNNIVNYSFALDKKE
SIO_010081: COCCU_RS14010
subclass of: SO_0000673
so part of: COCCU_RS14010
location: complement(2971..3825)
location: region:2971-3825:-1
so has part: feature:2971-3825:-1:exon

WP_156232948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2971-3825:-1:exon

COCCU_RS14015
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14015
old locus tag: COCCU_14125
so part of: sequence
location: 4308..5627
location: region:4308-5627:1
so has part: feature:4308-5627:1:exon
subclass of: SO_0000010

position:4308:1
position: 4308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5627:1
position: 5627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4308-5627:1:exon

COCCU_RS14015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14015
old locus tag: COCCU_14125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006357777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aromatic ring-hydroxylating dioxygenase subunit alpha
translation: MGIPNELSELAPVQQAPKRWDDYIRRDRVHRELYTEDRIFQEEMIKVFGQTWVYLAHESQLPEPNSFLSVRMGLRPIIVTKDRKGVIHAVFNRCSHRAATLCREESGVAKSFQCPYHGWTFRNTGELVGAPWPQGYADFDKSEFDLGKVSRVETYRGFIFGTLNENAPTLEDHLGNARPWLDYWIDRAPEGEVIVNSGAHRMGYRGNWKLAYDNAGDGYHPSFSHRSLLEMASRLGDSKDMSYFGKTPDDGAMSIHSLGNGHSVLDQRPNFDGPGSIWENQRPQPGREWFEEMIREKYPDDADRLLDVCAGAQINLSIFPNLLLIGNQIQVIEPLAVDRTQLTWNATTIGGVPDEINTMRMRTQEDFPAFGEPDDQANFEEVQRGLAVPEAEWILMNRGLDVEDWQELSENGVIKSAVTDEIHMRSYYGEWLRLMNGEK
SIO_010081: COCCU_RS14015
subclass of: SO_0000673
so part of: COCCU_RS14015
location: 4308..5627
location: region:4308-5627:1
so has part: feature:4308-5627:1:exon

WP_156232950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4308-5627:1:exon

COCCU_RS14020
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14020
old locus tag: COCCU_14130
so part of: sequence
location: 5627..6223
location: region:5627-6223:1
so has part: feature:5627-6223:1:exon
subclass of: SO_0000010

position:6223:1
position: 6223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5627-6223:1:exon

COCCU_RS14020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14020
old locus tag: COCCU_14130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011754299.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aromatic-ring-hydroxylating dioxygenase subunit beta
translation: MVSKLKKYEDTSAWSYHVDNEFYADLDRFNQVLRQDWAGADVETHREAEAFLNREAWLIDEARFNEWLELFSADCLYWVPVIPGGGDPRTQISHSFDDCRRLTDRVYWLRTGLAFSQIPQSRTRRIISNIEVHDEPENSLRFIRSNFMVHEFRAGIAKTYAGWTGHALSEGKNGWEIRLKQVNLIDSEHIHENLTLIF
SIO_010081: COCCU_RS14020
subclass of: SO_0000673
so part of: COCCU_RS14020
location: 5627..6223
location: region:5627-6223:1
so has part: feature:5627-6223:1:exon

WP_156232952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5627-6223:1:exon

COCCU_RS14025
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14025
old locus tag: COCCU_14135
so part of: sequence
location: 6259..6537
location: region:6259-6537:1
so has part: feature:6259-6537:1:exon
subclass of: SO_0000010

position:6259:1
position: 6259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6537:1
position: 6537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6259-6537:1:exon

COCCU_RS14025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14025
old locus tag: COCCU_14135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006357779.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDLDSALEKLREQNEFLQRQVRHLEREVAAMRPVIAEVRRLRIWDFAPYEVSPDESWLALDRHSATTLMQALAGNDHWHPWTSSLDPRPQP
SIO_010081: COCCU_RS14025
subclass of: SO_0000673
so part of: COCCU_RS14025
location: 6259..6537
location: region:6259-6537:1
so has part: feature:6259-6537:1:exon

WP_156232954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6259-6537:1:exon

COCCU_RS14030
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14030
old locus tag: COCCU_14140
so part of: sequence
location: 6534..7268
location: region:6534-7268:1
so has part: feature:6534-7268:1:exon
subclass of: SO_0000010

position:6534:1
position: 6534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7268:1
position: 7268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6534-7268:1:exon

COCCU_RS14030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14030
old locus tag: COCCU_14140
inference: COORDINATES: protein motif:HMM:NF012345.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 1 glutamine amidotransferase
translation: MTPTPTKQVTLLITHNPDPDIDQVCQILDNRKKTWRHIQPFAGDKLPNLHEVSQVICFGGPYAAYDQDRFPFLREEAQFLRDAVDADIPVLGICLGSQILAEALGGTSRPGDHGLECGFVDVVPVAGQEDVAHQLTGRYFSFHTDSIDLPPGAELLAVSQRYPQAWRQGSALAIQFHPEMSVTGIRELLRIEKVKIRQHGINVENLMAEAENNRALLQQGAEKVIGGWIDHADARAPVHTGESP
SIO_010081: COCCU_RS14030
subclass of: SO_0000673
so part of: COCCU_RS14030
location: 6534..7268
location: region:6534-7268:1
so has part: feature:6534-7268:1:exon

WP_156232956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6534-7268:1:exon

COCCU_RS14035
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14035
old locus tag: COCCU_14145
so part of: sequence
location: 7389..8900
location: region:7389-8900:1
so has part: feature:7389-8900:1:exon
subclass of: SO_0000010

position:7389:1
position: 7389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8900:1
position: 8900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7389-8900:1:exon

COCCU_RS14035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14035
old locus tag: COCCU_14145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006357781.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine synthetase family protein
translation: MTTTQTPVYAPKFIEKYDLYTPVQQEAAERSLRRIETDGIEVIRIVWPDQHGLLRGKSLTRDAYAAALKAGNDITMAPFFFDPANAIVLNPFSADGGFTVEGLRGSPNVKMVPDPVTFRVLPWAPETAVVISDLYMSNGELFPFAPRSILKQSLQKMADAGYGLIAGIEMEWYLTKLIDNMLETGSLGAPGTPADPPRVAPVARGYSYLLTDHLDEIDDILRPIRKAIEDMGMPLRSMDDEWAPSQVETTFDILEALAAADAAVLFRMAVKQIAKRNGHIASFMCTPAIEGFYASGWHLHTSVVDLVTGENLMVPGEGEALSELGRHYVGGTLAHGIAASTFTTPTINGYRRRRPYSLAPDRLTWAMDNRASMMRVISSPHDQASHVENRVGDSAANPYLYIASQAVAGLDGILNRIEPGVMAEDPYAEDVPQLPDTLEASLDLLEKDTFFRKEFGDAFIDYIVTMKRSEVNRYNEWLSNNPDASTYVNGVTDWEHREYFELF
SIO_010081: COCCU_RS14035
subclass of: SO_0000673
so part of: COCCU_RS14035
location: 7389..8900
location: region:7389-8900:1
so has part: feature:7389-8900:1:exon

WP_156232958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7389-8900:1:exon

COCCU_RS14040
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14040
old locus tag: COCCU_14150
so part of: sequence
location: 8974..9294
location: region:8974-9294:1
so has part: feature:8974-9294:1:exon
subclass of: SO_0000010

position:8974:1
position: 8974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9294:1
position: 9294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8974-9294:1:exon

COCCU_RS14040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14040
old locus tag: COCCU_14150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011754303.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2Fe-2S iron-sulfur cluster-binding protein
translation: MPAIRLQSPDGRSHTVEARPGASVMETAVKHGVPGIVAECGGGLSCATCHVYVSPEFLEKTGIAEDFEDEMLDDTVSERQANSRLSCQIRMTDELDGLEVTIAPEQ
SIO_010081: COCCU_RS14040
subclass of: SO_0000673
so part of: COCCU_RS14040
location: 8974..9294
location: region:8974-9294:1
so has part: feature:8974-9294:1:exon

WP_156232960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8974-9294:1:exon

COCCU_RS14045
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14045
old locus tag: COCCU_14155
so part of: sequence
location: 9296..10576
location: region:9296-10576:1
so has part: feature:9296-10576:1:exon
subclass of: SO_0000010

position:9296:1
position: 9296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10576:1
position: 10576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9296-10576:1:exon

COCCU_RS14045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14045
old locus tag: COCCU_14155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011754304.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MTTLTTGTLIIGGGEAALHTAVALRAQGYDAGIMIAAEEPYSPYQRPPLSKAFLTGEADEYSLQLRADDYYLDNHIDLRTGSRITEVNITARGQGEAVTQDGDTITFAKVVLATGATPRHLTIPGAEAEGVVYLRDIDSARQLSRGLGEARKVVVIGGGFIGLEAAAAARMRGIEVTILEAGECLLGRVAAPPISEFYRQAHENRGATVMTGAAVTEIAVGEEGEVTGVILADGQEIPADLVVVGIGVIPNTALAQQLNLECQRGILVDHAGRTRHPDIYAAGDCTQQPHPSLPGEVVCVESVQNAAAQGKIVAASIVGNSLPAPQVPWFWSDQGDLKLQIAGLSHGYDDYVLRGDPATECFSLLYYRGNRLIAVDAINQSHDFMAVRRALSKNATIDPERAGDTTVALKTLIQDDHVQNRNTVSA
SIO_010081: COCCU_RS14045
subclass of: SO_0000673
so part of: COCCU_RS14045
location: 9296..10576
location: region:9296-10576:1
so has part: feature:9296-10576:1:exon

WP_156232962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9296-10576:1:exon

COCCU_RS14050
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14050
old locus tag: COCCU_14160
so part of: sequence
location: 10545..11273
location: region:10545-11273:1
so has part: feature:10545-11273:1:exon
subclass of: SO_0000010

position:10545:1
position: 10545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11273:1
position: 11273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10545-11273:1:exon

COCCU_RS14050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14050
old locus tag: COCCU_14160
inference: COORDINATES: protein motif:HMM:NF019342.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
translation: MYKIGIPSRLSSSPADKRVVIANQLIDLIADRLRSLDAEPILLNPSDLSHPPDLDALLLPGGGDISPHRYGQEPDPRVYNVDPEQDRLDFGMARHALHRNLPIMGICRGMQLLNVLYGGSLIQHLPTSAVKHSFQLKRKSTTLAERFTPHEVEITPGSRLAGILGSSVWTASAHHQAVDELGEGLRIVARAADGTVEAVEDPRRSVIGVQWHPEIREHGGEAQDHLFMNLLHCVELGRAVKI
SIO_010081: COCCU_RS14050
subclass of: SO_0000673
so part of: COCCU_RS14050
location: 10545..11273
location: region:10545-11273:1
so has part: feature:10545-11273:1:exon

WP_156232964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10545-11273:1:exon

COCCU_RS14055
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14055
old locus tag: COCCU_14165
so part of: sequence
location: 11509..12261
location: region:11509-12261:1
so has part: feature:11509-12261:1:exon
subclass of: SO_0000010

position:11509:1
position: 11509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12261:1
position: 12261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11509-12261:1:exon

COCCU_RS14055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14055
old locus tag: COCCU_14165
inference: COORDINATES: protein motif:HMM:NF019322.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MVYLPSPSSPKQSTHVTIGEILRSRISHEKMQAGDRFPTERELAEEFGVARMTVRKALELLQMEGVVERRRGRTGGTFLRATVPKVEMTRIEGFIPRFHDRNMEVTSRILTADRRQAPEKVTQALEIDAGEPVFYLERLRSVNNTPALIERSFFPANMVPGMLHQDLSGSIYDLLRRRWSLPPVRKWETIVPGVTSMREQELLQVKKELLILRLERRTQVADNRFIEYAEDVLRTDIARVEVYTTSGPGG
SIO_010081: COCCU_RS14055
subclass of: SO_0000673
so part of: COCCU_RS14055
location: 11509..12261
location: region:11509-12261:1
so has part: feature:11509-12261:1:exon

WP_156232966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11509-12261:1:exon

COCCU_RS14060
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14060
old locus tag: COCCU_14170
so part of: sequence
location: complement(12526..13161)
location: region:12526-13161:-1
so has part: feature:12526-13161:-1:exon
subclass of: SO_0000010

position:12526:-1
position: 12526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13161:-1
position: 13161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12526-13161:-1:exon

COCCU_RS14060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14060
old locus tag: COCCU_14170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSSTPRARTERALADLLATEGAQAITVARVRATARVDQALAAEVVRQWRDTRRTAAGDPAFVPATAEETHAFEALRAVIGQQVLAGRAHQENTLQQVVKAATEDADQAHRELAELVEKLAREQAATAEARALLAQANAELAALATDNKRLRHQLHTQQHTLEVAQSQAAEARGRLSVFEQWFTQQTTHTPITPAPHAIIPPEQTPPSPTS
SIO_010081: COCCU_RS14060
subclass of: SO_0000673
so part of: COCCU_RS14060
location: complement(12526..13161)
location: region:12526-13161:-1
so has part: feature:12526-13161:-1:exon

WP_156232968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12526-13161:-1:exon

COCCU_RS14065
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14065
old locus tag: COCCU_14175
so part of: sequence
location: 13356..14036
location: region:13356-14036:1
so has part: feature:13356-14036:1:exon
subclass of: SO_0000010

position:13356:1
position: 13356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14036:1
position: 14036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13356-14036:1:exon

COCCU_RS14065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14065
old locus tag: COCCU_14175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017944264.1
GO function: GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO process: GO:0006805 - xenobiotic metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: haloacid dehalogenase type II
translation: MIEPRPTVVIFDVNETLSDQSSLRDRLVEVGAPAELLPEWFSGILRDGMALTAAGGYADFADLARDGLRALLPARAGLTPSDGLIDQVVAGFHRLDVHPDVAEGVRLLHGSGIRLITMTNGSTTITEALLDRAGLREYFELHLDVRGPRRWKPAPAAYGYALARAGVAAGDALLVAVHPWDVDGALRAGLRGAWIRRGQAATAYPKAMVAPTITADDLVELGAMFT
SIO_010081: COCCU_RS14065
subclass of: SO_0000673
so part of: COCCU_RS14065
location: 13356..14036
location: region:13356-14036:1
so has part: feature:13356-14036:1:exon

WP_156232970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13356-14036:1:exon

COCCU_RS14070
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14070
old locus tag: COCCU_14180
so part of: sequence
location: 14613..14933
location: region:14613-14933:1
so has part: feature:14613-14933:1:exon
subclass of: SO_0000010

position:14613:1
position: 14613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14933:1
position: 14933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14613-14933:1:exon

COCCU_RS14070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14070
old locus tag: COCCU_14180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018017343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WhiB family transcriptional regulator
translation: MTRRKPVRARRPEKIPTPEDWVIQASCREDDPDALFVQGAQQRRAATICRPCPVQRHCLAMSLDNREEFGVWGGLTERQRRALLRTHTDVESWADYLTAGDSLTGI
SIO_010081: COCCU_RS14070
subclass of: SO_0000673
so part of: COCCU_RS14070
location: 14613..14933
location: region:14613-14933:1
so has part: feature:14613-14933:1:exon

WP_156233117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14613-14933:1:exon

COCCU_RS14075
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14075
old locus tag: COCCU_14185
so part of: sequence
location: 15113..15343
location: region:15113-15343:1
so has part: feature:15113-15343:1:exon
subclass of: SO_0000010

position:15113:1
position: 15113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15343:1
position: 15343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15113-15343:1:exon

COCCU_RS14075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14075
old locus tag: COCCU_14185
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYDTDTDPFDSPEGQALLRRVAALAQQHFPHSWKETSYITQAAGFILANGWTTLEQALTVCPEGTRRILTENSIIC
SIO_010081: COCCU_RS14075
subclass of: SO_0000673
so part of: COCCU_RS14075
location: 15113..15343
location: region:15113-15343:1
so has part: feature:15113-15343:1:exon

WP_156232972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15113-15343:1:exon

COCCU_RS14785
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14785
old locus tag: COCCU_14190
so part of: sequence
location: 15415..15624
location: region:15415-15624:1
so has part: feature:15415-15624:1:exon
subclass of: SO_0000010

position:15415:1
position: 15415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15624:1
position: 15624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15415-15624:1:exon

COCCU_RS14785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14785
old locus tag: COCCU_14190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRASYQEQFDDFTHDLIIMGDTVRDIMTAACDALLQGSLDSAENALTLSHDLPEIRTRCAQRAVDLFAL
SIO_010081: COCCU_RS14785
subclass of: SO_0000673
so part of: COCCU_RS14785
location: 15415..15624
location: region:15415-15624:1
so has part: feature:15415-15624:1:exon

WP_231598964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15415-15624:1:exon

COCCU_RS14790
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14790
old locus tag: COCCU_14195
so part of: sequence
location: 15652..16080
location: region:15652-16080:1
so has part: feature:15652-16080:1:exon
subclass of: SO_0000010

position:15652:1
position: 15652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16080:1
position: 16080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15652-16080:1:exon

COCCU_RS14790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14790
old locus tag: COCCU_14195
inference: COORDINATES: protein motif:HMM:NF014010.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSSIYILEHLDRMAALATHVAQSAHRRHPERVIPAAVTGYFEELTHLTLGMVKKTRDLLIVPDAEAALALARDDDAVDDLDRYLLVMLTQREWAHTTREAVDTALLARFYERFADQCVSVGTRIVYLTTGLPPEEYLAHQE
SIO_010081: COCCU_RS14790
subclass of: SO_0000673
so part of: COCCU_RS14790
location: 15652..16080
location: region:15652-16080:1
so has part: feature:15652-16080:1:exon

WP_231598965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15652-16080:1:exon

COCCU_RS14085
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14085
old locus tag: COCCU_14200
so part of: sequence
location: complement(16272..16544)
location: region:16272-16544:-1
so has part: feature:16272-16544:-1:exon
subclass of: SO_0000010

position:16272:-1
position: 16272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16544:-1
position: 16544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16272-16544:-1:exon

COCCU_RS14085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14085
old locus tag: COCCU_14200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGKVEDALISTGYDELVNQARRGTAEGAEYERFMLLCDLVETHITTPGDKNDSSERWEAVQVITTCLRGLRRTADSAHPAAQVSQRSYA
SIO_010081: COCCU_RS14085
subclass of: SO_0000673
so part of: COCCU_RS14085
location: complement(16272..16544)
location: region:16272-16544:-1
so has part: feature:16272-16544:-1:exon

WP_156232974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16272-16544:-1:exon

COCCU_RS14090
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14090
old locus tag: COCCU_14205
so part of: sequence
location: complement(16732..17076)
location: region:16732-17076:-1
so has part: feature:16732-17076:-1:exon
subclass of: SO_0000010

position:16732:-1
position: 16732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17076:-1
position: 17076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16732-17076:-1:exon

COCCU_RS14090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14090
old locus tag: COCCU_14205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVNATTEDADQAHRELAELVEKLAQKQAATAEARALLAQAGAERAALTTDNKRLRHQLHTQQHTLEVAQAQAAEAGGRLSVFEQLFTHHTTHTPITPAPDAPTLPEQTAPSSTP
SIO_010081: COCCU_RS14090
subclass of: SO_0000673
so part of: COCCU_RS14090
location: complement(16732..17076)
location: region:16732-17076:-1
so has part: feature:16732-17076:-1:exon

WP_156232976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16732-17076:-1:exon

COCCU_RS14095
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14095
old locus tag: COCCU_14210
so part of: sequence
location: complement(17283..17636)
location: region:17283-17636:-1
so has part: feature:17283-17636:-1:exon
subclass of: SO_0000010

position:17283:-1
position: 17283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17636:-1
position: 17636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17283-17636:-1:exon

COCCU_RS14095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14095
old locus tag: COCCU_14210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRHYVVSQVRDSEYCILGVFSHLREAQRLVEETCISVHGIPAIEVWEGERVLHDEVPETVVYTAYLHEDGEIKLYQHVQRTPAIRATVVVNHSSVRAVGTDRDEVLQKVAEATPGK
SIO_010081: COCCU_RS14095
subclass of: SO_0000673
so part of: COCCU_RS14095
location: complement(17283..17636)
location: region:17283-17636:-1
so has part: feature:17283-17636:-1:exon

WP_156232978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17283-17636:-1:exon

COCCU_RS14100
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14100
old locus tag: COCCU_14215
so part of: sequence
location: complement(18417..19178)
location: region:18417-19178:-1
so has part: feature:18417-19178:-1:exon
subclass of: SO_0000010

position:18417:-1
position: 18417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19178:-1
position: 19178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18417-19178:-1:exon

COCCU_RS14100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14100
old locus tag: COCCU_14215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015401658.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MTNPHVALNEISKSYGATTIIAPTSITIGKGEFVAILGPSGCGKSTILSMIAGLSFPTSGTVSADGRQVTGPGADRGLVFQHHALLPWMTARANIEFGLRSARPEFSRTERSEVASEWLEKVNLSHAANRRPARLSGGMQQRVGLARAFAIDPAILLLDEPFGALDALTRRQLQLQLLQVWEASRRTVVMITHDVDEAILLSDRVLVMAPSPNSTIIADIAIDLPRPRMDDTDDSQDERKSELRHQLLGLLKH
SIO_010081: COCCU_RS14100
subclass of: SO_0000673
so part of: COCCU_RS14100
location: complement(18417..19178)
location: region:18417-19178:-1
so has part: feature:18417-19178:-1:exon

WP_156232980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18417-19178:-1:exon

COCCU_RS14105
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14105
old locus tag: COCCU_14220
so part of: sequence
location: complement(19171..19908)
location: region:19171-19908:-1
so has part: feature:19171-19908:-1:exon
subclass of: SO_0000010

position:19171:-1
position: 19171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19908:-1
position: 19908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19171-19908:-1:exon

COCCU_RS14105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14105
old locus tag: COCCU_14220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010268000.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MLLAAFLGLWQLAATSGWLSDLAPTPERTGARAVELLSDPFYRDGPASVGIFWHLLTSLKRVLIGFLIATMIAVPLGFVLGRSDTLRWAVDPMVQILRPVSPLAWLPLGLALLRDAENTAIFVIVLSALWPTLVNTIDAVRNIHPTYLDLTATLGTSWWSKVVYVMFPSALPGIITGLRLSLSTSWLVIIAAEMLVGGQGIGFFVWNMWNRLDIDAIVVAIVIIGLTGLILDHLIAALQKVVRYD
SIO_010081: COCCU_RS14105
subclass of: SO_0000673
so part of: COCCU_RS14105
location: complement(19171..19908)
location: region:19171-19908:-1
so has part: feature:19171-19908:-1:exon

WP_156233119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19171-19908:-1:exon

COCCU_RS14110
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14110
old locus tag: COCCU_14225
so part of: sequence
location: complement(19977..21131)
location: region:19977-21131:-1
so has part: feature:19977-21131:-1:exon
subclass of: SO_0000010

position:19977:-1
position: 19977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21131:-1
position: 21131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19977-21131:-1:exon

COCCU_RS14110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14110
old locus tag: COCCU_14225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005281069.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MPHLSRRTFLRAASATALGSVMFGVGACSTAPRRVSPSNAEDPLMIGYVPIACASPLLIAEAAGVFKRHGLSVALKKYAGWSDLWSAYSTGELNIAHMLSPMPVAIDSGVTNGQRPTELSFTQNTNGQAITLATEHHPRVQSATDMRGMVLGIPFEYSVHALLLRDYLVSGGVDPVADVELRLLRPADMVAQLEVGGIDGFIGPEPFNQRALQSGAGRIFLPTRQLWDKHPCCSVAMAKDWRSFHPDSADRLLSALHEAAGIVNDPARHEETAQLLSHEKYLNQPVALLAPALAGHYRNWDDEEVTDPEMMSFGDPTDPTAITWMAAQIARWDLSSGTSLPLDDAAIIAAATSVLPAGSPPTGRPVKINGEVFDPAHPTRTYTL
SIO_010081: COCCU_RS14110
subclass of: SO_0000673
so part of: COCCU_RS14110
location: complement(19977..21131)
location: region:19977-21131:-1
so has part: feature:19977-21131:-1:exon

WP_156232982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19977-21131:-1:exon

COCCU_RS14115
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14115
old locus tag: COCCU_14230
so part of: sequence
location: 21392..21940
location: region:21392-21940:1
so has part: feature:21392-21940:1:exon
subclass of: SO_0000010

position:21392:1
position: 21392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21940:1
position: 21940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21392-21940:1:exon

COCCU_RS14115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14115
old locus tag: COCCU_14230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018018402.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OsmC family protein
translation: MSDLTPNHIDGEALAPIDADALKALAQKNIDNPEGGLKKIRTHTEADGHFRNITQVRDLPPILVSEPPALLGDNSAANPTEVAQAALAACISVGIQAIATHRGVTLTKINIDIVSDIDVSPTWGTGDLGEHKRPGVSNVEVSIDLEGDTDRETLDQIQKDAIEWSPVVNTYTRPAKLTSKLV
SIO_010081: COCCU_RS14115
subclass of: SO_0000673
so part of: COCCU_RS14115
location: 21392..21940
location: region:21392-21940:1
so has part: feature:21392-21940:1:exon

WP_156232984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21392-21940:1:exon

COCCU_RS14120
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14120
old locus tag: COCCU_14235
so part of: sequence
location: 21985..23070
location: region:21985-23070:1
so has part: feature:21985-23070:1:exon
subclass of: SO_0000010

position:21985:1
position: 21985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23070:1
position: 23070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21985-23070:1:exon

COCCU_RS14120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14120
old locus tag: COCCU_14235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006063971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA dehydrogenase family protein
translation: MTTVTQPVTTTESLILPAVVRAEIAANAKSVDKGEKDARYVLNLLGDAELLSLGAPTNESGKLLEMARVVREVSAEDLSAGFTLWADRMTLEYLMQASTDYSLGLAEQLRSGQRPGVTGMAGAFKEAAGCGEIDLSASRVEGGWLINGKLNWASNLYEDAIVVTAAKAADGTRFLFAFEAGHTGVEFGQPFGLLGLNATASAWVGFDSVFIPDVQVLTEDFTNFIKTVRPTFVVLQTAECIGVAEAALASGAKRLTGVNESFSQDHQQAAARVADVITRQEEIISRIGNDQVSSVELLELRLDAAEVAVATANIEVRVAGGAGYAKSSPASRRFREAAFIPVQSPSEGQLRWELARARENA
SIO_010081: COCCU_RS14120
subclass of: SO_0000673
so part of: COCCU_RS14120
location: 21985..23070
location: region:21985-23070:1
so has part: feature:21985-23070:1:exon

WP_156232986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21985-23070:1:exon

COCCU_RS14125
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14125
old locus tag: COCCU_14240
pseudo: true
so part of: sequence
location: complement(23146..24351)
location: region:23146-24351:-1
so has part: feature:23146-24351:-1:exon
subclass of: SO_0000010

position:23146:-1
position: 23146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24351:-1
position: 24351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23146-24351:-1:exon

COCCU_RS14125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14125
old locus tag: COCCU_14240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558201.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: COCCU_RS14125
subclass of: SO_0000673
so part of: COCCU_RS14125
location: complement(23146..24351)
location: region:23146-24351:-1
so has part: feature:23146-24351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23146-24351:-1:exon

COCCU_RS14130
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14130
old locus tag: COCCU_14245
so part of: sequence
location: complement(24376..24975)
location: region:24376-24975:-1
so has part: feature:24376-24975:-1:exon
subclass of: SO_0000010

position:24376:-1
position: 24376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24975:-1
position: 24975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24376-24975:-1:exon

COCCU_RS14130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14130
old locus tag: COCCU_14245
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MRAWKNTTVNDPAARTEHINNHMLDSHGKRDFIATVPGTRLVGDITYLKTGSGWLYLATVIDLATRMVVGWSMDSNMRTPLIINALAMARDHGRLHPEGAIFHSDRGSQYTSGEFQTWCAGNKITQSMGVTGVCWDNAVAENFFSHLKTEMYHHYDFKNHLSARTAVMDYIEGWYNRRRPHSNNQGLDLTRVWWTLTPA
SIO_010081: COCCU_RS14130
subclass of: SO_0000673
so part of: COCCU_RS14130
location: complement(24376..24975)
location: region:24376-24975:-1
so has part: feature:24376-24975:-1:exon

WP_156232988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24376-24975:-1:exon

COCCU_RS14870
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14870
so part of: sequence
location: complement(25272..25397)
location: region:25272-25397:-1
so has part: feature:25272-25397:-1:exon
subclass of: SO_0000010

position:25272:-1
position: 25272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25397:-1
position: 25397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25272-25397:-1:exon

COCCU_RS14870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEPGPVEWAKYKALQAEKAALKRENEFWGKASAFFAAKHL
SIO_010081: COCCU_RS14870
subclass of: SO_0000673
so part of: COCCU_RS14870
location: complement(25272..25397)
location: region:25272-25397:-1
so has part: feature:25272-25397:-1:exon

WP_269434477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25272-25397:-1:exon

COCCU_RS14135
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14135
old locus tag: COCCU_14255
so part of: sequence
location: complement(25560..26330)
location: region:25560-26330:-1
so has part: feature:25560-26330:-1:exon
subclass of: SO_0000010

position:25560:-1
position: 25560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26330:-1
position: 26330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25560-26330:-1:exon

COCCU_RS14135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14135
old locus tag: COCCU_14255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018296475.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MIDIDETTRRKLRSLRLSRFAENFFDLVTSDEHADALPEEIFLRAVDATDAQRRERNIATAITQAHFRYPQASLGELVNAAERGINERQLKRVAATNWRENPTNVHLFAPAGAGKTYIACAIGIAACQAGFSVAYYRLDQLVAKLAVHSPTDPGYADAMKKLMNVDVLIIDDFLTLSIDQRGQEDLTKIVIDRDGRLPTIISSQSSAAYWVEVLPNRVGADSLVSRLNNGRRIQIGDYDMRRHLAKKHQEDLDHDS
SIO_010081: COCCU_RS14135
subclass of: SO_0000673
so part of: COCCU_RS14135
location: complement(25560..26330)
location: region:25560-26330:-1
so has part: feature:25560-26330:-1:exon

WP_156232989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25560-26330:-1:exon

COCCU_RS14140
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14140
old locus tag: COCCU_14260
so part of: sequence
location: complement(26334..27407)
location: region:26334-27407:-1
so has part: feature:26334-27407:-1:exon
subclass of: SO_0000010

position:26334:-1
position: 26334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27407:-1
position: 27407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26334-27407:-1:exon

COCCU_RS14140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14140
old locus tag: COCCU_14260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MFTVAAANEKMGAWIDCHVKALNYLGKLPAVIVPDNASTATYQPKKNSSYRATTSRYADFADYYDITVVPTRPAKPRDKAAVERAVQIAYTRILGYFHGEQFYTLDELNEAIAERLADINDVMTRPDGSTRRQRFNEDEAPMMRDLPRMAFTEVSWRSAKVDRNWHISCDYQYYSVPFALVGKTLRARLTTDLVSIFDGDRLVAEHTRMHGFRYRYSTDVTHGPSGDTDAHNVLTRDELLAWAGSFGPATITVITMILDRNRASVPRGLTLSRNILANLGRKHDKTTLEPACAQLLDKQLAPTMSVLKRLQADIAHARPTTTAQPTPGLPRQVDLSRLSDAVFIRPTSHFDDDQEGK
SIO_010081: COCCU_RS14140
subclass of: SO_0000673
so part of: COCCU_RS14140
location: complement(26334..27407)
location: region:26334-27407:-1
so has part: feature:26334-27407:-1:exon

WP_231598966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26334-27407:-1:exon

COCCU_RS14795
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14795
old locus tag: COCCU_14265
so part of: sequence
location: complement(27418..27933)
location: region:27418-27933:-1
so has part: feature:27418-27933:-1:exon
subclass of: SO_0000010

position:27418:-1
position: 27418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27933:-1
position: 27933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27418-27933:-1:exon

COCCU_RS14795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14795
old locus tag: COCCU_14265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MAQFKEIMALRLNNRSYSYIAAALGCSNRDIARVQTVIDDHNITPDSFTQLPPAFFDETFTDQRGRRSMSYDQPNFQALAKKLTDDKHLTRHKLWMDYLAAPSADGLLKYQYSQFCDGLAEYLKANDLVDVVEHEPGQEFYVDWAGDKITIYDQATGRVGFKASLFIGVCP
SIO_010081: COCCU_RS14795
subclass of: SO_0000673
so part of: COCCU_RS14795
location: complement(27418..27933)
location: region:27418-27933:-1
so has part: feature:27418-27933:-1:exon

WP_231598967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27418-27933:-1:exon

COCCU_RS14145
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14145
old locus tag: COCCU_14270
pseudo: true
so part of: sequence
location: complement(<28089..28217)
location: region:28089-28217:-1
so has part: feature:28089-28217:-1:exon
subclass of: SO_0000010

position:28089:-1
position: 28089
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:28217:-1
position: 28217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28089-28217:-1:exon

COCCU_RS14145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14145
old locus tag: COCCU_14270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611950.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: COCCU_RS14145
subclass of: SO_0000673
so part of: COCCU_RS14145
location: complement(<28089..28217)
location: region:28089-28217:-1
so has part: feature:28089-28217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28089-28217:-1:exon

COCCU_RS14150
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14150
old locus tag: COCCU_14275
pseudo: true
so part of: sequence
location: 28505..>28660
location: region:28505-28660:1
so has part: feature:28505-28660:1:exon
subclass of: SO_0000010

position:28505:1
position: 28505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28660:1
position: 28660
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28505-28660:1:exon

COCCU_RS14150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14150
old locus tag: COCCU_14275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086557987.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: COCCU_RS14150
subclass of: SO_0000673
so part of: COCCU_RS14150
location: 28505..>28660
location: region:28505-28660:1
so has part: feature:28505-28660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28505-28660:1:exon

COCCU_RS14155
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14155
old locus tag: COCCU_14280
so part of: sequence
location: complement(28698..30770)
location: region:28698-30770:-1
so has part: feature:28698-30770:-1:exon
subclass of: SO_0000010

position:28698:-1
position: 28698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30770:-1
position: 30770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28698-30770:-1:exon

COCCU_RS14155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14155
old locus tag: COCCU_14280
inference: COORDINATES: protein motif:HMM:NF019313.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KAP family NTPase
translation: MPTIWSDAPIKSADEDSFGRSPYAKQIAHLVQGAHSWEDSIVFGLTGPWGSGKSSMLAMIEEQLTSSENEWHIARFTPWATSDINGLLGDFYASLSSALPSERGKDLREKLGTILQISAPAAKMIPLFGDAAAMAAEKAGERLQKQPSWSQAFKEASDELKNLDIPVLVIADDIDRLHGEELLALLKVVRLLGRFPGVHFLLAYDEQTVTETLSETGIAGKGTAAGRKFLEKIVQYPLAIPPLVPTQLRTRIDEGLEPFITRLEQPEMFAMRLQGLRRVLLSQLSTPRAIDRYIAQVRHHLAMFDSQEVQVEDVIVVTLLKTSFPSLYNQLPRYKDQLITGMQDGLGRGFYDADRKTFDPDPLFDGIPPQECPDARTLLEELFPGVRGKRSYYFSRPEERSIYDKRYFDRYFAMGVPAHDISDTAVANAITAAADGNESPLKELLLDEDSNRISMAIDKAETSTDLLGEDAERLAVLRTIIPLLGSLSRHDTALLSADKRIREWSGKMLSRLSDDVEVSKLVDALNLSPHHLDQVHILQFMLLYNGHHRWVDEVLDQVCQHLVEVIMSNLRDQDEASLDDQVEFMIFVLREWKQQEFLVEPLRAGLAEGAFTVEDVAARCVTYSRSLGGEQTVTKLHDFNREAFDEIVPDADPSWSSTPRSNVDEYDLSWKNRRDFAVAKAPGGEKASPD
SIO_010081: COCCU_RS14155
subclass of: SO_0000673
so part of: COCCU_RS14155
location: complement(28698..30770)
location: region:28698-30770:-1
so has part: feature:28698-30770:-1:exon

WP_156232993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28698-30770:-1:exon

COCCU_RS14160
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14160
old locus tag: COCCU_14285
so part of: sequence
location: complement(30772..31866)
location: region:30772-31866:-1
so has part: feature:30772-31866:-1:exon
subclass of: SO_0000010

position:30772:-1
position: 30772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31866:-1
position: 31866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30772-31866:-1:exon

COCCU_RS14160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14160
old locus tag: COCCU_14285
inference: COORDINATES: protein motif:HMM:NF020419.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MLITFSSRPPALWPRATSCLRRALQNSRKKKTGLTMIHDVDENQNRQNLQRLRKILSTKITTVARSKGVDPQLVRKQYVFALFFKRLFHGDEGNWMLLGGNALLIRAGGGRFTRDIDLARGTTWEDPAPVKEELQVLVNAGTASDPFRFELGDIDPHSDPDSFGYGSKTAKITVTVWLGNRIFDTFLIDITNRRHDHGPVDMLPLSPVIEHETLADLPDIPVVAVENHLADKICAMYELHGRNKEEPSTRYRDLADIVRLINASIIDAARLREILGHEQQRRGIVLPQQLHAPSPRWVENFPRAAKDFAEYPVAYHQLNTSLSHAGVCVNPVLSGEIIAGHWGPASQSWQTSGELPSIRTHEEN
SIO_010081: COCCU_RS14160
subclass of: SO_0000673
so part of: COCCU_RS14160
location: complement(30772..31866)
location: region:30772-31866:-1
so has part: feature:30772-31866:-1:exon

WP_156232995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30772-31866:-1:exon

COCCU_RS14165
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14165
old locus tag: COCCU_14290
so part of: sequence
location: complement(31751..32581)
location: region:31751-32581:-1
so has part: feature:31751-32581:-1:exon
subclass of: SO_0000010

position:31751:-1
position: 31751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32581:-1
position: 32581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31751-32581:-1:exon

COCCU_RS14165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14165
old locus tag: COCCU_14290
inference: COORDINATES: protein motif:HMM:NF020962.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
translation: MDEVTVLEELEMFGSSQWGLITSAQARDLGVDRLWLSRMRARGRLQRIRHGVYAVPSARFGPWQDLQAAWLATEASSPAENRVEAEDPVVVSHVSAAGVHGLGDLLAARHEFSSPARRQTTQQDLRFHRCEVPAGDITWVEGLPVTSVARTVGDLAAQAIDFDHLATVVRDAVEDHHVSTDELAERLFPHLGDYGAANSRELVHSLLGHAGYAPSKDPTVTKAWEFLTRQLHADLVNPDVDHFLQQATGAMAKGDLLSPARAAELKKEENRTDHDT
SIO_010081: COCCU_RS14165
subclass of: SO_0000673
so part of: COCCU_RS14165
location: complement(31751..32581)
location: region:31751-32581:-1
so has part: feature:31751-32581:-1:exon

WP_156232997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31751-32581:-1:exon

COCCU_RS14170
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14170
old locus tag: COCCU_14295
so part of: sequence
location: complement(32950..33852)
location: region:32950-33852:-1
so has part: feature:32950-33852:-1:exon
subclass of: SO_0000010

position:32950:-1
position: 32950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33852:-1
position: 33852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32950-33852:-1:exon

COCCU_RS14170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14170
old locus tag: COCCU_14295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADVYPAAGQSEMTGFGYGPTHPRQEPGASTLGNPNATVFEPPKPRNKVLTVIKYVLALALLIFGVAGIATAFDPAYTATKSDFLGSILTALVFLVPAIWFFTCEIIDKIRLPKTGQRIKRFLWLPALISLASVIGASIPSGDSYGHHLSTTGNFKEILAVHDQAKQECFDSVLSHAKFSASAKIPEFKSGISVATSGELAIHSFAGTAHFPNGFGVFSEYVFLCERAQDARASAGYASDAELSYHSIDVEERNFLTSVPDLSPTGIWEPVETDGILGFEQTEPQPDNIFVFFDESGSET
SIO_010081: COCCU_RS14170
subclass of: SO_0000673
so part of: COCCU_RS14170
location: complement(32950..33852)
location: region:32950-33852:-1
so has part: feature:32950-33852:-1:exon

WP_156232999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32950-33852:-1:exon

COCCU_RS14175
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14175
old locus tag: COCCU_14300
so part of: sequence
location: 35545..36135
location: region:35545-36135:1
so has part: feature:35545-36135:1:exon
subclass of: SO_0000010

position:35545:1
position: 35545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36135:1
position: 36135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35545-36135:1:exon

COCCU_RS14175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14175
old locus tag: COCCU_14300
inference: COORDINATES: protein motif:HMM:NF023096.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3267 domain-containing protein
translation: MKTQQQRDTLDLPTAYHRHLTVDFKQDRKYFVTLQAIFLAVVLTAVALALVFDLPLATGWPPVVTIPVTLLSLLVYMAAHEATHGLTLRLLTGTTPSYAVRFPFLTTSSPLHLTRRSTITTALSPSIIWGTVFFVALFLVPADARLPVYILLTVNFAGSAGDYLEAALALRQPREALFQDEGDRVDVFLPTAQEPR
SIO_010081: COCCU_RS14175
subclass of: SO_0000673
so part of: COCCU_RS14175
location: 35545..36135
location: region:35545-36135:1
so has part: feature:35545-36135:1:exon

WP_156233001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35545-36135:1:exon

COCCU_RS14180
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14180
old locus tag: COCCU_14305
so part of: sequence
location: 36424..38010
location: region:36424-38010:1
so has part: feature:36424-38010:1:exon
subclass of: SO_0000010

position:36424:1
position: 36424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38010:1
position: 38010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36424-38010:1:exon

COCCU_RS14180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14180
old locus tag: COCCU_14305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005269046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4389 domain-containing protein
translation: MDSRTTYPTSSAQRPARMRPLNWVLLVAGVLLTALGLGLTLGGAVLMSAESAQQDGQYLTLDPQRYQSTGHAITTPSLVLDPGESGTTGLPPLEELASIQVKVTPVVPDQAIFVGIGDASEVAAYLDDVPSAAIGGMTWTETGQLSGQWSWNSGTDGQLQDIPGDRVPASPADQDFWAVSAMGTGTQEVTFDLQEGQWTLVVMNADATRPVWIDLQAGARTDLLNPVNPGLLITGLIALLLGLALLLLGTRGLGRDIDQPTPSPLATTGDIAGGHPTSGATRLAVHPLSFTGHLDTRLSRGLWLIKWLLAIPHYLILALLWFALVITTIAAGIAILFTGRYPRSWFAFSVGVLRWNWRVGFYAYSTLGTDQYPPFTLARADYPAELAVDYPDRLSRGLVLVKWWLLAIPHLLILGILTGSTGAAGMVYSDEGWTRVTTGGSPSLLGLLVLIAAVGLLFTGRYLPGLFALIVGLNRWVYRVATYVLLLRDDYPPFRLDQGPTDLPHPGEPAGSETITATTTPHPPSAPA
SIO_010081: COCCU_RS14180
subclass of: SO_0000673
so part of: COCCU_RS14180
location: 36424..38010
location: region:36424-38010:1
so has part: feature:36424-38010:1:exon

WP_231598968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36424-38010:1:exon

COCCU_RS14185
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14185
old locus tag: COCCU_14310
so part of: sequence
location: complement(38276..38629)
location: region:38276-38629:-1
so has part: feature:38276-38629:-1:exon
subclass of: SO_0000010

position:38276:-1
position: 38276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38629:-1
position: 38629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38276-38629:-1:exon

COCCU_RS14185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14185
old locus tag: COCCU_14310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGVYFAGTAVVNTVYTVRTAPDFLRWLGDTTWFPPYRPIIRALEPAAPAVVLTAAVFQATVAYHLLRGRRISGALLWAQAWVLGLIPALPWPYWTVNAVSAAAFATIRHGATRNSSA
SIO_010081: COCCU_RS14185
subclass of: SO_0000673
so part of: COCCU_RS14185
location: complement(38276..38629)
location: region:38276-38629:-1
so has part: feature:38276-38629:-1:exon

WP_156233003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38276-38629:-1:exon

COCCU_RS14190
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14190
old locus tag: COCCU_14315
so part of: sequence
location: complement(38874..40763)
location: region:38874-40763:-1
so has part: feature:38874-40763:-1:exon
subclass of: SO_0000010

position:38874:-1
position: 38874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40763:-1
position: 40763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38874-40763:-1:exon

COCCU_RS14190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14190
old locus tag: COCCU_14315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896749.1
GO function: GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MSTPENPWVLFVKSRDGLTAVAALVAILLHLVLWLVMSLEGLQADWPLVAVVVLGGGPLMISVLRSVVRSKGGADLLAAISIITAVLLGEWLVATIIVLMLSGGQALEEAATRRATSTLDALARRSPTIAHRLFGETLADDTEEVPVDEIRVGDRIAVLPHELCPVDGEVVAGHGAMDESYLTGEPYVVSKSVGSSVISGAINSDSALTIEATALPQDSRYAKIVGVLRQAEEHRPAMRRLADRLGSWYTLIALFLGGVGWVLSGDPLRFLAVVVVATPCPLLIGVPVAIIGAISLAARRGIIIKNPGMLENTSRVTTVMFDKTGTLTYGRPVITAIDLAPGVDENKVLALAAAVEHYSRHPLASAIIQGAQARGLELPAVTEVSERPGQGLTGQVGGHTILLTNRKTTITLDSASAGLLPHTSAGMEAAVLIDGRYAALIQLRDEPRASAADFIAHLPGKHDVEKIMIISGDRESEARYLAEKVGIEEVHAGVSPEGKLAIVEDYNQRGPTMFLGDGINDAPAMAAATVGVAMGAGSDITAEAADAVILDSSLERLDDLLHIGARMRRIALQSALGGMGLSIIGMILAVFGLLTPLLGAIAQEVIDVLAILNSARVAMARGTLADFEK
SIO_010081: COCCU_RS14190
subclass of: SO_0000673
so part of: COCCU_RS14190
location: complement(38874..40763)
location: region:38874-40763:-1
so has part: feature:38874-40763:-1:exon

WP_156233005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38874-40763:-1:exon

COCCU_RS14195
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14195
old locus tag: COCCU_14320
so part of: sequence
location: complement(40946..41170)
location: region:40946-41170:-1
so has part: feature:40946-41170:-1:exon
subclass of: SO_0000010

position:40946:-1
position: 40946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41170:-1
position: 41170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40946-41170:-1:exon

COCCU_RS14195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14195
old locus tag: COCCU_14320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017838312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDKTKLQWNDLSRSQQTVILTLGSLQLSLAVSAWTDLFFRPVSQVHGRKATWAAIIAINFLGPALYFTRGIRR
SIO_010081: COCCU_RS14195
subclass of: SO_0000673
so part of: COCCU_RS14195
location: complement(40946..41170)
location: region:40946-41170:-1
so has part: feature:40946-41170:-1:exon

WP_156233007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40946-41170:-1:exon

COCCU_RS14205
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14205
old locus tag: COCCU_14330
so part of: sequence
location: 41655..42641
location: region:41655-42641:1
so has part: feature:41655-42641:1:exon
subclass of: SO_0000010

position:41655:1
position: 41655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42641:1
position: 42641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41655-42641:1:exon

COCCU_RS14205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14205
old locus tag: COCCU_14330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019433794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-dependent alcohol dehydrogenase family protein
translation: MRAWRTGATPGQLELVEAPLPEPQVGEVLVKVEVCGVCRTDLHVIDQELTVHHPGVIPGHQVVGTVETTGPGVLELHPGDRVGVAWLRGTCGVCQWCRTGRENLCPRSTYTGWDADGGYADYVTVPEAFAYQLPAQLDAVTLAPLLCAGIIGYRAFKRSALPPGGRLGIYGFGSSGHLTATLALAAGAEVYAMTRGERNRQLARDLGLSFVGDSHERPPQLLDSAIVFAPAGDIVPTALQATQRGGTVTLAGIHMTDVPSLTYQEHLFNERDLRTVTANTRADGIEFLRLASRLKMSPQITVYDFEETNKALSDLRDGRASGSLVVTL
SIO_010081: COCCU_RS14205
subclass of: SO_0000673
so part of: COCCU_RS14205
location: 41655..42641
location: region:41655-42641:1
so has part: feature:41655-42641:1:exon

WP_156233011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41655-42641:1:exon

COCCU_RS14210
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14210
old locus tag: COCCU_14340
so part of: sequence
location: complement(42854..43117)
location: region:42854-43117:-1
so has part: feature:42854-43117:-1:exon
subclass of: SO_0000010

position:42854:-1
position: 42854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43117:-1
position: 43117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42854-43117:-1:exon

COCCU_RS14210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14210
old locus tag: COCCU_14340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLHEHVIIVRIVHMNVPHAAPADRISVDDIGSAADGIVHMSIRVGFTDDQDIPRNLALAVDQTPELHIDLDQALYFLSVLTLRPPRA
SIO_010081: COCCU_RS14210
subclass of: SO_0000673
so part of: COCCU_RS14210
location: complement(42854..43117)
location: region:42854-43117:-1
so has part: feature:42854-43117:-1:exon

WP_156233013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42854-43117:-1:exon

COCCU_RS14215
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14215
old locus tag: COCCU_14345
so part of: sequence
location: complement(43107..43463)
location: region:43107-43463:-1
so has part: feature:43107-43463:-1:exon
subclass of: SO_0000010

position:43107:-1
position: 43107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43463:-1
position: 43463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43107-43463:-1:exon

COCCU_RS14215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14215
old locus tag: COCCU_14345
inference: COORDINATES: protein motif:HMM:NF014731.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KUP/HAK/KT family potassium transporter
translation: MDNCRSHGPTGSPRQSSEAADPSSPSSGSAGSTAASKRKAVGTARSTIQPTSWPLALGALGVVFGDIDTSPLYALHTAFSMEHNKVTVAPENVYGIISMVLWTITLIVTVKYVLPYAP
SIO_010081: COCCU_RS14215
subclass of: SO_0000673
so part of: COCCU_RS14215
location: complement(43107..43463)
location: region:43107-43463:-1
so has part: feature:43107-43463:-1:exon

WP_156233015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43107-43463:-1:exon

COCCU_RS14220
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14220
old locus tag: COCCU_14350
so part of: sequence
location: complement(43621..44634)
location: region:43621-44634:-1
so has part: feature:43621-44634:-1:exon
subclass of: SO_0000010

position:43621:-1
position: 43621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44634:-1
position: 44634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43621-44634:-1:exon

COCCU_RS14220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14220
old locus tag: COCCU_14350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015490368.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium and cobalt transport protein CorA
translation: MTIVDNAVYVNGHRTDTPAGLAATFEATRKREGLAWIDLYRPDPVEIQSIADEFNLHEIAVEEALYGHQRAKLERYGNTLFTVLRPARYLDDVEKVEFGELHVFAGPDFVVTVRHAEAVNLARVRHRLEAAPELLALGSHAVLYAILDKVVDAYEPVVVGLENDIDEIEDELFDAHPDVARRIYELSREVIAFQRATHPLGGMLEALQHSSETESGIELQARLRGVHGHVIRVVERVDAFRVLLHHALSVHATLVGQRQNEEMRRLSELSLAQSEEVKKISSWAAILFAPTLVGTVYGMNFKVMPELGWQLGYLFALGLMVALSLGLYVWFKRRGWL
SIO_010081: COCCU_RS14220
subclass of: SO_0000673
so part of: COCCU_RS14220
location: complement(43621..44634)
location: region:43621-44634:-1
so has part: feature:43621-44634:-1:exon

WP_156233017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43621-44634:-1:exon

COCCU_RS14225
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14225
old locus tag: COCCU_14355
so part of: sequence
location: 44877..45407
location: region:44877-45407:1
so has part: feature:44877-45407:1:exon
subclass of: SO_0000010

position:44877:1
position: 44877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45407:1
position: 45407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44877-45407:1:exon

COCCU_RS14225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14225
old locus tag: COCCU_14355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017833791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin domain-containing protein
translation: MKVLIAYSSWHGSTAEIAQRLAAVVTRDGITVDVTSIREAPDPAGYDAVVVGSAVHNQAWSAEAAQFVHHHAFALSQRPVWLFSVGMSDGLPRLLRRAARAGQDRRITDALPSAIQPREHRVFSGVCRPEHLPRWSGIVFRMVGGHFGDYRDWPAIEDWARHITRQLSAPQTTEAE
SIO_010081: COCCU_RS14225
subclass of: SO_0000673
so part of: COCCU_RS14225
location: 44877..45407
location: region:44877-45407:1
so has part: feature:44877-45407:1:exon

WP_156233019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44877-45407:1:exon

COCCU_RS14230
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14230
old locus tag: COCCU_14360
so part of: sequence
location: complement(45870..46439)
location: region:45870-46439:-1
so has part: feature:45870-46439:-1:exon
subclass of: SO_0000010

position:45870:-1
position: 45870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46439:-1
position: 46439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45870-46439:-1:exon

COCCU_RS14230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14230
old locus tag: COCCU_14360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSPHAALWWLPVGAGGHFVIHTSHWWEAMAARREKRPSQPLYHAALEIFTGTTRYVIEMGPAWGQTVTGRGVVATGPVGMEFLGRWRLFRYEVRCWEDGVIPDRDFAVGEVLEIPLTAREAGDMIARTTTVPPLTWGRDEFGIGDMWNSNSLVAWLLHTGGVEAADFVPPSPGRAPGWQAGIIAAEQG
SIO_010081: COCCU_RS14230
subclass of: SO_0000673
so part of: COCCU_RS14230
location: complement(45870..46439)
location: region:45870-46439:-1
so has part: feature:45870-46439:-1:exon

WP_156233021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45870-46439:-1:exon

COCCU_RS14235
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14235
old locus tag: COCCU_14365
so part of: sequence
location: complement(46436..47335)
location: region:46436-47335:-1
so has part: feature:46436-47335:-1:exon
subclass of: SO_0000010

position:46436:-1
position: 46436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47335:-1
position: 47335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46436-47335:-1:exon

COCCU_RS14235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14235
old locus tag: COCCU_14365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770314.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
translation: MKRLYEKNQVRHFLVWLALYLMATIVAVNLGVNVGISAHAAAVIPLGVLTVIMLAYLLRSGIGLQIGLGVSPAVPAARMWFYLPLLILIGLPLLRGVRDDLTILIGVTIIAHFVFVGFLEEVLFRGLLLHALLRKGRPVWAVIVTSLTFGLGHSASLFIGQGGTDTALQIINATLVGLLFTLVVIATGSLQAVIVAHILYNIIAEFSTIGEGTSLIIPAIAVLIIYGSWLLYGAGALSRLKEIAATQRPPDSAQQASRPLHPRSSTLSQRSDVADVPERFLPGHPGPAEPLTRPREEKQ
SIO_010081: COCCU_RS14235
subclass of: SO_0000673
so part of: COCCU_RS14235
location: complement(46436..47335)
location: region:46436-47335:-1
so has part: feature:46436-47335:-1:exon

WP_156233023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46436-47335:-1:exon

COCCU_RS14240
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14240
old locus tag: COCCU_14370
so part of: sequence
location: 47871..48356
location: region:47871-48356:1
so has part: feature:47871-48356:1:exon
subclass of: SO_0000010

position:47871:1
position: 47871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48356:1
position: 48356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47871-48356:1:exon

COCCU_RS14240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14240
old locus tag: COCCU_14370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLPLSDKKVSTLLVVLLMFGAVSAFCGAVLGIVFNGAGVPLEHLAGTPFSSFVVPGLILGVVVGGTQLAAGVALLTRSPRAPLMVAVAGFGMMIWIYTELALIGYSWLQSIYFGLGIVELILVLALLGIAPEFVSSWDRHRGRARSPEKSSETSPPTGVS
SIO_010081: COCCU_RS14240
subclass of: SO_0000673
so part of: COCCU_RS14240
location: 47871..48356
location: region:47871-48356:1
so has part: feature:47871-48356:1:exon

WP_156233025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47871-48356:1:exon

COCCU_RS14245
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14245
old locus tag: COCCU_14375
so part of: sequence
location: 48356..49225
location: region:48356-49225:1
so has part: feature:48356-49225:1:exon
subclass of: SO_0000010

position:49225:1
position: 49225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48356-49225:1:exon

COCCU_RS14245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14245
old locus tag: COCCU_14375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRRLQEGQRQEVVTRIPALWAWLSASAAVLAAVGSVLGLSVPGRLYGQKTSEMVIAVLAQDLVNLFLVAPLMLILAVYARRGSLSSGLCLIGFLAFTVYNYAIYAFSIHFGPLFLIWVAVLGLSVFALIGNLAALTLPGVDTRFSGATVRVPGWLLIVVAVLFALLWLSEIVPDLLNGRNSTSATDWDVPTNPVHVLDLAFFLPAVGAVGVLLLRGHRIGYVAAPGALIWVILTSLPILVTPFVAQARGEEPGWFVLVPIGTLAVATAVIVWRLLHTVGQRPTVSPGA
SIO_010081: COCCU_RS14245
subclass of: SO_0000673
so part of: COCCU_RS14245
location: 48356..49225
location: region:48356-49225:1
so has part: feature:48356-49225:1:exon

WP_156233027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48356-49225:1:exon

COCCU_RS14250
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14250
so part of: sequence
location: 49266..49607
location: region:49266-49607:1
so has part: feature:49266-49607:1:exon
subclass of: SO_0000010

position:49266:1
position: 49266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49607:1
position: 49607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49266-49607:1:exon

COCCU_RS14250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGPTADNRPTRATFTDKEVAGPPEPVQRYLSTAIRAGTPLTRAGRDHGAQSSWAGGCPAGPDASRSAAGCGGAEAVWVPPALLPQFTTTWAVLDDTQMSSHAWSLGSNCANPF
SIO_010081: COCCU_RS14250
subclass of: SO_0000673
so part of: COCCU_RS14250
location: 49266..49607
location: region:49266-49607:1
so has part: feature:49266-49607:1:exon

WP_156233029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49266-49607:1:exon

COCCU_RS14255
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14255
old locus tag: COCCU_14380
so part of: sequence
location: 49913..50248
location: region:49913-50248:1
so has part: feature:49913-50248:1:exon
subclass of: SO_0000010

position:49913:1
position: 49913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50248:1
position: 50248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49913-50248:1:exon

COCCU_RS14255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14255
old locus tag: COCCU_14380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASTSGWKRKAGAILSFLLGFGMGVILRRFLIPLGTSVEQLVWPWIVGSFIFLVIVGGVLVAFAAVLYRYRHRHCLAVALGWGIWAGFLVHSLLLFVLSLLIFKYGITPVG
SIO_010081: COCCU_RS14255
subclass of: SO_0000673
so part of: COCCU_RS14255
location: 49913..50248
location: region:49913-50248:1
so has part: feature:49913-50248:1:exon

WP_231598969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49913-50248:1:exon

COCCU_RS14260
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14260
old locus tag: COCCU_14385
so part of: sequence
location: complement(50483..51100)
location: region:50483-51100:-1
so has part: feature:50483-51100:-1:exon
subclass of: SO_0000010

position:50483:-1
position: 50483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51100:-1
position: 51100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50483-51100:-1:exon

COCCU_RS14260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14260
old locus tag: COCCU_14385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003848243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MALIGYMRVSKADGSQSTDLQRDALLAAGVDPDHMYEDKASGKKEDRPELVSCLKALRAGDTLLVWKLDRLGRNLRHLVNIVHDLTARGVGLKVLTGQGAAIDTTSAQGKLVFGIFAALAEFERELISERTIAGLESARARGRKGGRPFKMTPAKVRLAMASMGQPETSVAALCKELDITRQTLYRHVSPTGELREDGRKLLAGR
SIO_010081: COCCU_RS14260
subclass of: SO_0000673
so part of: COCCU_RS14260
location: complement(50483..51100)
location: region:50483-51100:-1
so has part: feature:50483-51100:-1:exon

WP_156233031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50483-51100:-1:exon

COCCU_RS14265
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14265
old locus tag: COCCU_14390
so part of: sequence
location: 51428..52045
location: region:51428-52045:1
so has part: feature:51428-52045:1:exon
subclass of: SO_0000010

position:51428:1
position: 51428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52045:1
position: 52045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51428-52045:1:exon

COCCU_RS14265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14265
old locus tag: COCCU_14390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896729.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MVQRTSETDIGYARVSTDEQDARLQHDALTRAECYRIFTDTASGSLESRPELDKLLDQLRPGDTLVVWCLDRLGRSIRHLIDQLAALQDRGVEFRSLQENIDTSSSGGRLVFHIFASLAEFERDLIRERTNAGLEAARARGRVGGRPPLLSGDKLRTARQLYEQKDMTVAQIGEVLGVSRTTVYRALRKETGALPTRQKKPSQST
SIO_010081: COCCU_RS14265
subclass of: SO_0000673
so part of: COCCU_RS14265
location: 51428..52045
location: region:51428-52045:1
so has part: feature:51428-52045:1:exon

WP_156233033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51428-52045:1:exon

COCCU_RS14270
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14270
old locus tag: COCCU_14400
so part of: sequence
location: complement(52536..53171)
location: region:52536-53171:-1
so has part: feature:52536-53171:-1:exon
subclass of: SO_0000010

position:52536:-1
position: 52536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53171:-1
position: 53171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52536-53171:-1:exon

COCCU_RS14270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14270
old locus tag: COCCU_14400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSSAPRARTERALADLLAKEGAQAITVARVRATARVDQALAAEVVRHWREMRRTGAADPAFAPATEEETRAFEALRAVIGQQVLAGRAQQDDTLHQVAKTATEDADQAHQEVTELAEKLEQEQAATTEALAMIAQAEAELTALAKDNERLRHQLETQQHTLEEARSQAAEARGRLSVFEQWFTQQTAQTPTVRSGDSAIPQEQETPSPAP
SIO_010081: COCCU_RS14270
subclass of: SO_0000673
so part of: COCCU_RS14270
location: complement(52536..53171)
location: region:52536-53171:-1
so has part: feature:52536-53171:-1:exon

WP_156233035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52536-53171:-1:exon

COCCU_RS14275
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14275
old locus tag: COCCU_14405
so part of: sequence
location: 53584..54984
location: region:53584-54984:1
so has part: feature:53584-54984:1:exon
subclass of: SO_0000010

position:53584:1
position: 53584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54984:1
position: 54984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53584-54984:1:exon

COCCU_RS14275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14275
old locus tag: COCCU_14405
inference: COORDINATES: protein motif:HMM:NF012312.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTTDSVRQRSISEVIESAGITRRHWLYFTLIFLLLLADGMDSTIVSHIFPSLIKEWGVSVGGGIALIVSGGFVAMGLGSLVAGRLADQLGRKPVLVAAGFILSAMTILGGTAENFTMFTIWRFIACVGIGAVLPTAVTLLADLVPQKRRGAMVAASYAGLGLGTTVGATLAGAILPAEGWRVLMFVGGAIPLIITVLIWIGIPESPTLLAARGSTNRARRSLVQIFPRVNPDEVDLTASVVKKQQSATFQRLLSQPYTWTSVLLWVFGFLSLGTQLLIIQYLPTLLQMPSPGLTTVESSTIVAVYGFASVASLLLLGAVLAKWQRFGVIAACLAVSAIVAVAVSLVSDAGFVTLLIVLGVTGFFVPAALGPTRNVLAVEAYPTDMRATGVGITELSARLGSAGQGALGGVLIGGGLGLGGFFLALLVPLGILGAALAGLKALHRPQETSDPEQEPIAVPESLLPQT
SIO_010081: COCCU_RS14275
subclass of: SO_0000673
so part of: COCCU_RS14275
location: 53584..54984
location: region:53584-54984:1
so has part: feature:53584-54984:1:exon

WP_197088535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53584-54984:1:exon

COCCU_RS14280
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14280
old locus tag: COCCU_14410
so part of: sequence
location: complement(55395..55973)
location: region:55395-55973:-1
so has part: feature:55395-55973:-1:exon
subclass of: SO_0000010

position:55395:-1
position: 55395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55973:-1
position: 55973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55395-55973:-1:exon

COCCU_RS14280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14280
old locus tag: COCCU_14410
inference: COORDINATES: protein motif:HMM:NF028169.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MALRSEQSHQAILDATIALVDPEQGEGFSLQKLSIERIAKEAGVSKTTIYRWWPSKVAVVIDSFLDNHIARTPLNDELPALDALRDHLASVAEIFGGGEGRLVAQLIAECQHDPEVMKEFKERFWHNRRDVAYAVIQRGQDEGVIRQDISPAEVAELLYGPIYFRLLIPDGPLDRDWAHRHLNNALEGLRVR
SIO_010081: COCCU_RS14280
subclass of: SO_0000673
so part of: COCCU_RS14280
location: complement(55395..55973)
location: region:55395-55973:-1
so has part: feature:55395-55973:-1:exon

WP_156233039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55395-55973:-1:exon

COCCU_RS14285
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14285
old locus tag: COCCU_14415
so part of: sequence
location: 56086..57339
location: region:56086-57339:1
so has part: feature:56086-57339:1:exon
subclass of: SO_0000010

position:56086:1
position: 56086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57339:1
position: 57339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56086-57339:1:exon

COCCU_RS14285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14285
old locus tag: COCCU_14415
EC number: 2.3.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011691021.1
GO function: GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
GO process: GO:0006631 - fatty acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA C-acyltransferase
translation: MLPYFEKERVLMAVTIAPNDAVIVAYQRTPFGRARKGTLANERPEDLARAAVGAVLSTVPSLDDGSLDDFYLGTAVPEGAQGDNIARRVAVLSGMDQLPGATVNRFCASSLEAVAAGARAIKADDGDVYLVGGVESTSTTPPLTTSPYPGMEEAASRTKKLLDSGEQWCDPRQMGEVPDLYVPMGATAEFVAKMTGTTRRDQDEWALMSQQRAARAIEQGFFEQEILAYERADGTVIRTDDGPRPGTSMEGLEGLRPVFLEGGTVTAGNASPLNDGASAAVLMSARCAGELGITPLARVLGTATTGLSPEIMGLGPVEASKKVLQRLGMTIKDIDLIELNEAFAAQVVPVVRQLDADPMQVNIHGGALAIGHPFGATGVRLVGTLMNGLRATEGTLGLATLCIGGGQGMAMVIERLS
SIO_010081: COCCU_RS14285
subclass of: SO_0000673
so part of: COCCU_RS14285
location: 56086..57339
location: region:56086-57339:1
so has part: feature:56086-57339:1:exon

WP_231598960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56086-57339:1:exon

COCCU_RS14295
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14295
old locus tag: COCCU_14425
so part of: sequence
location: complement(57900..58916)
location: region:57900-58916:-1
so has part: feature:57900-58916:-1:exon
subclass of: SO_0000010

position:57900:-1
position: 57900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58916:-1
position: 58916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57900-58916:-1:exon

COCCU_RS14295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14295
old locus tag: COCCU_14425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018600395.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrodipicolinate synthase family protein
translation: MDYTKSEARAWARENFTGAVAVTHPSYTPDFSGLNENAIRHDVLRLKELGYKGTLLVAEVNVTPEENARITAIAREAAGPDFALFFHAIFGTLEENIHAANLAAKAGADRALLAYPASFWPTSYDEIFDYTKRFTDGTDLATMLFPLPAWGFERIHPAGMSVDFVRRVLDAMPSIVAIKAEQGYPGIPGVMEMYHHFREEVVISCPIEAETIPLMSQLDFQFSGTANTHWMGDYYPRAFELARTGQWEEAMKLYWKVQPARAANTAVSSTSTPGTNTINRTQWKYQEWLAGFNGGALRPPAAKLPDRFMKQLRAGLEASGLPVTDSPDEEFVRGRIAP
SIO_010081: COCCU_RS14295
subclass of: SO_0000673
so part of: COCCU_RS14295
location: complement(57900..58916)
location: region:57900-58916:-1
so has part: feature:57900-58916:-1:exon

WP_156233045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57900-58916:-1:exon

COCCU_RS14300
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14300
old locus tag: COCCU_14430
so part of: sequence
location: complement(58932..59942)
location: region:58932-59942:-1
so has part: feature:58932-59942:-1:exon
subclass of: SO_0000010

position:58932:-1
position: 58932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59942:-1
position: 59942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58932-59942:-1:exon

COCCU_RS14300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14300
old locus tag: COCCU_14430
inference: COORDINATES: protein motif:HMM:NF014476.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine cyclodeaminase family protein
translation: MTDDTLSPSPLLFLSDTDIAELSDIEAAMEVIRDVYSTPEDHVRTPGRIFAESPQEWMRIMPSVPAAGRLFGAKSIVGSFADGLSVSYLITLFDKQTADLVALLDGNRVTGLRTAATTAVGVSTIIPDHPVSVGVIGSGFEARSHLQALSHVAQFSTIHVFSPTEENRRAFARDFDGLNGATATPVSSAEAAVDGADLILCAARSRDETPIIEAQCIGQNATVVSIGSTTPGQRELPVELLEQASTIVVDTYDEVVHGSGDMLAAQAQGIDLTPKVTTLSAALRGEAVIDKNRGIRIYKSTGSGLQDIAVAEMLVNRARAAELGTKLPVNIITTRK
SIO_010081: COCCU_RS14300
subclass of: SO_0000673
so part of: COCCU_RS14300
location: complement(58932..59942)
location: region:58932-59942:-1
so has part: feature:58932-59942:-1:exon

WP_156233047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58932-59942:-1:exon

COCCU_RS14305
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14305
old locus tag: COCCU_14435
so part of: sequence
location: 60068..61444
location: region:60068-61444:1
so has part: feature:60068-61444:1:exon
subclass of: SO_0000010

position:60068:1
position: 60068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61444:1
position: 61444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60068-61444:1:exon

COCCU_RS14305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14305
old locus tag: COCCU_14435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019482284.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MTLATINPATGATEVLVEPHAPDEVFSRIDEAAAAARELQSTTFDQRARWMHAAADILTDQAEGLGELITVEMGKPIHQSIAEVHKSAKVMRYYADHAETFLADSPLEDPGVVGASRAWTRYEPLGVVLAVMPWNYPIWQVIRFAAPALMAGNSGLLKHASNVPQAALFLDTLFERAGFPVGSFRALLIGGAEVAGVLADPRVKAVTLTGSEAAGRSVASIAGDHIKKSVLELGGSDPFIVMPSADITTAAATAVRARINNNGQSCIAGKRFIVHSKVYDEFAAAFAEQMSALVIGDPLDPATEVGPLATEAGRNSLVELVDDAVHKGAEVLAGGFAPDREGFFYAPTILAGLNDSMRVVQEETFGPVASLYRAEDAEAALRIANQTSFGLSSSVWTSDPEEQAWFLQGLDAGAVFINGMTISYQELPFGGVKRSGYGRELAAAGIREFCNLKAVWAA
SIO_010081: COCCU_RS14305
subclass of: SO_0000673
so part of: COCCU_RS14305
location: 60068..61444
location: region:60068-61444:1
so has part: feature:60068-61444:1:exon

WP_156233049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60068-61444:1:exon

COCCU_RS14310
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14310
old locus tag: COCCU_14440
so part of: sequence
location: 61556..63061
location: region:61556-63061:1
so has part: feature:61556-63061:1:exon
subclass of: SO_0000010

position:61556:1
position: 61556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63061:1
position: 63061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61556-63061:1:exon

COCCU_RS14310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14310
old locus tag: COCCU_14440
EC number: 1.14.13.127
inference: COORDINATES: protein motif:HMM:NF004829.0
GO function: GO:0071949 - FAD binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase
translation: MSATFDTDVVVIGGGPVGVTALAMLGRMGLTAIGVEKNTEMWRTARAVHFDGEAFRMLQSLGISEKLAKATRPMNSMHIQNEAGEVLVSVPTGQFGSQAWNDDLTFHQPDVESVLRDIVSDLPGIELRCGVSASEVNNVADGVEVTVVNAEGQESVLRSRWVIAADGARSSTRRALGIEGDRFGDDANWVVVDGHLVDSPGYEDDMIFLCHHSRPAMWIRLPGNRVRMEFMVMDGDDPDEIVTPEAIERISRGILPAANFTPERQAIYTFRGRIAQRWREGNIFLVGDAAHQAPPCFGQGLCAGIRDIANLVWKLDVVKRGIEDEDLLDTYETERKPHAQFWVEQAVKAAGFLQTLDPDAARQRDQFIRANPTEAAPVSPPLGPGFHDGEVDNRAGRLSVQPILSDGRRLDDLIGINFTLVLDTGMYNDLDADLRRQLESSNEVVVLTEPTQTDLILQAVGAQAVLIRPDRYILSVAESPVELDRVVRHIPGISVGAARTA
SIO_010081: COCCU_RS14310
subclass of: SO_0000673
so part of: COCCU_RS14310
location: 61556..63061
location: region:61556-63061:1
so has part: feature:61556-63061:1:exon

WP_197088527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61556-63061:1:exon

COCCU_RS14315
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14315
old locus tag: COCCU_14445
so part of: sequence
location: 63096..64034
location: region:63096-64034:1
so has part: feature:63096-64034:1:exon
subclass of: SO_0000010

position:63096:1
position: 63096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64034:1
position: 64034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63096-64034:1:exon

COCCU_RS14315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14315
old locus tag: COCCU_14445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004003465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MTFSPITHLRHFDLAVPDYDKQVEFYGKHWGLTATSDGSDLTYFAAEGSPEQYVVRVRKAGEKRLDLVSFGAANRQSVDQLAGYLATAGVKLISEPGNVQTPGGGYGFRFFDLEGRTIEVSSDVEVRQHRKIEEREDIPVRLSHVVLNSPNPEITLAWYEKHLGFRLSDTLNHPRTGDLFYFLRCNDQHHSMAIARGPHASLQHASFELRGLDEYMRGSGRMMRSGWQKLWGPGRHRAGNNTFTYFLDPNGNTMEYTTELETIEEDTWHPSVFNVQDAETSDQWGTANDMDDFITKEMFNDPDQGLYIAPPV
SIO_010081: COCCU_RS14315
subclass of: SO_0000673
so part of: COCCU_RS14315
location: 63096..64034
location: region:63096-64034:1
so has part: feature:63096-64034:1:exon

WP_156233053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63096-64034:1:exon

COCCU_RS14320
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14320
old locus tag: COCCU_14450
so part of: sequence
location: 64145..65161
location: region:64145-65161:1
so has part: feature:64145-65161:1:exon
subclass of: SO_0000010

position:64145:1
position: 64145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65161:1
position: 65161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64145-65161:1:exon

COCCU_RS14320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14320
old locus tag: COCCU_14450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015002860.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MKLGRIAVATPDGEQLRVVAAEPETDRVIDLARAYSLALQKKGATAERASEIGRSVFPGSLSRGISAGDAFLDLAHTALSAADDASLPLGEVEWRAAVDPPVIRDGLTFGTHIENYFKNVAKTKPVRAVYERPGFFKGSTATVYGNNQVIPYPNISEKLDYELEIGYIVGKPGRNLTPEESMKHVFGITIFNDWSLRDVQALEGPIGMGAQHSKDFAYSIGPWITTMDEISSIEGLKGQVRVNGEVWSDTRVENFVYTPAELVAYVSIFDGLQPGDLIGSGTMGFGAGVELNRFLQPGDVVELDLEGVGTLRNPVAEEKETPPWWPAPRPYPFDDEDN
SIO_010081: COCCU_RS14320
subclass of: SO_0000673
so part of: COCCU_RS14320
location: 64145..65161
location: region:64145-65161:1
so has part: feature:64145-65161:1:exon

WP_156233055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64145-65161:1:exon

COCCU_RS14325
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14325
old locus tag: COCCU_14455
so part of: sequence
location: 65164..65769
location: region:65164-65769:1
so has part: feature:65164-65769:1:exon
subclass of: SO_0000010

position:65164:1
position: 65164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65769:1
position: 65769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65164-65769:1:exon

COCCU_RS14325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14325
old locus tag: COCCU_14455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007594412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MTRPPVRRVVTGHNDTGQAIILSDGPAPNSFESDAIPGFGATVPWWTPDGEIDHVRDIDPASADAEIPSFPGPGETTFRIADFPPDSVYPDEAESAIFDQLDGHDEAEAGNKHSDGKHFWFHRTDSLDYAVVLDGEITLLVDDGEATLRAGDVAIQRATSHAWSNRTNKTARVLFVLIGTPPLSAAEIAEQRRASLGVGTS
SIO_010081: COCCU_RS14325
subclass of: SO_0000673
so part of: COCCU_RS14325
location: 65164..65769
location: region:65164-65769:1
so has part: feature:65164-65769:1:exon

WP_156233057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65164-65769:1:exon

COCCU_RS14330
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14330
old locus tag: COCCU_14460
so part of: sequence
location: 65766..67748
location: region:65766-67748:1
so has part: feature:65766-67748:1:exon
subclass of: SO_0000010

position:65766:1
position: 65766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67748:1
position: 67748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65766-67748:1:exon

COCCU_RS14330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14330
old locus tag: COCCU_14460
EC number: 6.2.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014743218.1
GO function: GO:0030729 - acetoacetate-CoA ligase activity [Evidence IEA]
GO process: GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetoacetate--CoA ligase
translation: MIINPHAAFGEVIWAPGQETIDASALKRFIPFLRGHGIIIGDTYDEVWQWSVDEPEQFWSLFAEFSGVQLGGPVTQVCTTDQMPHTQWFPGRSINFARHLLDGREGMALLAVSEDGQQKEITWETLRDEVAALAHHLRTIGVTAGDRVVAILPNVAEAVVGFLATSSIGAVWSICAPEFGPRAVISRFAQLEPKVVIAAPGYMLSGKDRDCQAALAEILAGLSTLEQVIWVDEHTTVMPPASSVPAVDWQQAIATSADLIYTDVDFNHPLWVLFSSGTTGKPKGIVHGHGGALLELLKMLTFHTELQPGDRYLNVASTSWVLWNALVGALGVGATAVLVDGNPTYPSVDRVWEIAADTETSALGVSAGFIHACAKADLRPGGVHNLSRLQCLQVTGSPLSVDGFRWVYSHVGDVWLASMSGGTDIVSVFVGGTSTLPVHAGFIQVSALGVRVESWDEQGVPTSAKGELVVTQPIPSMPLYFWGDDDNSRYYDSYFSTYPGVWRHGDIIEFTDSGILIHGRSDSTLNRNGLRLGSADIYTVVEALPEVAEAMVVGAEIGSENYYMPLFIRMAPDVEYEDAREAIITAIRLHLSPRYLPDDIVAMRAIPHTKTGKKLEVPVKRLIQGDSLGQVVDLGAVDDPALIKEYASFAQQWKTALNTV
SIO_010081: COCCU_RS14330
subclass of: SO_0000673
so part of: COCCU_RS14330
location: 65766..67748
location: region:65766-67748:1
so has part: feature:65766-67748:1:exon

WP_156233059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65766-67748:1:exon

COCCU_RS14335
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14335
old locus tag: COCCU_14465
so part of: sequence
location: complement(67896..68636)
location: region:67896-68636:-1
so has part: feature:67896-68636:-1:exon
subclass of: SO_0000010

position:67896:-1
position: 67896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68636:-1
position: 68636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67896-68636:-1:exon

COCCU_RS14335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14335
old locus tag: COCCU_14465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017934256.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MTGIGGGMGRVTARLFAREGATVIGCDLDSDSAAETVRLVEADGGSIESSAPVDLSDRNDIDKWISETISRHGRIDVLYNNASLPRFAPFAETSTEDYLFTIQNELHLVWHACQAAWPHLAEVGGAIVNIGSGAGFQGVRSLPQSAHAAAKGAVLGLTRQLAAEGVASGIRVNCVSPGVMATPPVLAMFKEFGDNAPVAPIIERTIDGKPGDPHAVAYAGLYLASDEAKWVTGSHLVVDGGASAIM
SIO_010081: COCCU_RS14335
subclass of: SO_0000673
so part of: COCCU_RS14335
location: complement(67896..68636)
location: region:67896-68636:-1
so has part: feature:67896-68636:-1:exon

WP_231598961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67896-68636:-1:exon

COCCU_RS14340
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14340
old locus tag: COCCU_14475
so part of: sequence
location: 68883..70496
location: region:68883-70496:1
so has part: feature:68883-70496:1:exon
subclass of: SO_0000010

position:68883:1
position: 68883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70496:1
position: 70496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68883-70496:1:exon

COCCU_RS14340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14340
old locus tag: COCCU_14475
inference: COORDINATES: protein motif:HMM:NF013714.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MSTNPVTDTRPIPPGVTEAELDRALAAFAAAIGAEKVADDPSFRQDFQDPYQVPGTAQNLPSAAVSPTSVEDVQAIVRIANEYRIPLWPIGRGKNNGYGGAAPQVRGSVMVSFRNMNRVLEINEELGYAILEPGVSWHDLHAAIEGGGHNLAASIVDVGWGGVVSNTLDHGLTYMPYSIDQASHCGFEVVLPNGDLMRTGSGAMDNNPTWPLYKRGLGPTSTEMFMQSNYGIVTKMGYWLMPKPEVYMPLWLRCWDDSKMPDLVDALRELMLAGTIDMRPQLSNTLIMASMMTNRAEWYDGPGPIPEDIIEKMSKELGLGRWMMRFALYGDEAVVDHNFAKIKARFSRIPGVEISGEKYGADQWETLPNPHEQIMIGVPNDDLYKMASWSGGEEGGHVDFSPVIPLTAQHAKAAQNLMKEMCAEAGFDYLGGMLPINGRSTTFINVIPFDTKDPEQVAKAYEGAKKMVAKAGKLGYGEYRAHLSFMDLAADQFGFNDHAQRRFNETIKDTLDPNGIIAPGKSGIWGSRLREAGFPQS
SIO_010081: COCCU_RS14340
subclass of: SO_0000673
so part of: COCCU_RS14340
location: 68883..70496
location: region:68883-70496:1
so has part: feature:68883-70496:1:exon

WP_156233063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68883-70496:1:exon

COCCU_RS14345
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14345
old locus tag: COCCU_14480
so part of: sequence
location: complement(70501..71490)
location: region:70501-71490:-1
so has part: feature:70501-71490:-1:exon
subclass of: SO_0000010

position:70501:-1
position: 70501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71490:-1
position: 71490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70501-71490:-1:exon

COCCU_RS14345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14345
old locus tag: COCCU_14480
inference: COORDINATES: protein motif:HMM:NF025878.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MDTVLDTRLIHPDDRQNYWSTGISMHFFPICIETVGTPLLEAHLSGGQIGPVGIRFIRGRPHRVARTASMVAASDPECILLYLLIGGSIRLEQDNRSCVLQPGDLACHDTSRPSAFESHDTFEVLMFSVPKWFIGLSTPNITRYTATRMARDDGHLPRLVAPFLVNLARTVAGNESLSSRDSEASAEMLVSMLRSIYAEPTPLEGRSHPDVLLVQMQQYALDRLHIPSLGPDSIAQAHFVSTRYVHKLFATSGTSASAWIRERRLEAAAQELRESPAMTISVIATKWGYRNPGSFSRAFREMYGCSPRDLRQSQVPGKNSRPLRGARAS
SIO_010081: COCCU_RS14345
subclass of: SO_0000673
so part of: COCCU_RS14345
location: complement(70501..71490)
location: region:70501-71490:-1
so has part: feature:70501-71490:-1:exon

WP_156233065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70501-71490:-1:exon

COCCU_RS14350
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14350
old locus tag: COCCU_14485
so part of: sequence
location: complement(71626..72948)
location: region:71626-72948:-1
so has part: feature:71626-72948:-1:exon
subclass of: SO_0000010

position:71626:-1
position: 71626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72948:-1
position: 72948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71626-72948:-1:exon

COCCU_RS14350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14350
old locus tag: COCCU_14485
inference: COORDINATES: protein motif:HMM:NF012927.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH:flavin oxidoreductase
translation: MSGQFRSAAEVLGSSWKIDGLEIKNRYVVGPMAVLQPTVDGHASDQTIAFLTRRAKGGAGLIIVGGTVATEGGYLEAPFQPILRFDRDEFVPSLTRLVDAVHAYDVPLFAQIFPSFGAMGVPEDGRPTRAASPKPVRMAAPRLPAGLYIPGGRTNPTPVEITKEEILEVQRQTVAAVLRAKKAGFDGVELGAHMRYLYSSFFSPRTNWREDEYGGSPENRARILTDTVRAIRAEVGPDYPVGVRMSANDHLDDGQGPEEFAEVATVIAKEGLGYIALTDGNYESMDHNVSSESGSMIDHGEPQAFRAALSDVPLLLSSTYIPQHGAEAIAAGYGDGIMLARQMLADPDFPNKVLEGRDDEIIWCDHENSCLRRLILNVPVRCHKNPETGREAILSGVREPISVKVKRPVQDLLITITGSETLMGVADKMASSRKASATTQ
SIO_010081: COCCU_RS14350
subclass of: SO_0000673
so part of: COCCU_RS14350
location: complement(71626..72948)
location: region:71626-72948:-1
so has part: feature:71626-72948:-1:exon

WP_156233067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71626-72948:-1:exon

COCCU_RS14355
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14355
so part of: sequence
location: complement(73472..73771)
location: region:73472-73771:-1
so has part: feature:73472-73771:-1:exon
subclass of: SO_0000010

position:73472:-1
position: 73472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73771:-1
position: 73771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73472-73771:-1:exon

COCCU_RS14355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLTPETRSTCKYWKWLLSFCFGRAIAAAVAAVGLFLGGLHTGVDDLAGVLEGIHEVKVQYELLSNPVLELEAAPQENSAHDEQILDAEVVEEQQLPDE
SIO_010081: COCCU_RS14355
subclass of: SO_0000673
so part of: COCCU_RS14355
location: complement(73472..73771)
location: region:73472-73771:-1
so has part: feature:73472-73771:-1:exon

WP_156233069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73472-73771:-1:exon

COCCU_RS14360
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14360
old locus tag: COCCU_14490
so part of: sequence
location: complement(73792..74403)
location: region:73792-74403:-1
so has part: feature:73792-74403:-1:exon
subclass of: SO_0000010

position:73792:-1
position: 73792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74403:-1
position: 74403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73792-74403:-1:exon

COCCU_RS14360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14360
old locus tag: COCCU_14490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQENPAMALYVILKKVVNSEARTVAAGWGSALGSAPNDKDFPQKHAEVVNLFAETQRYLLSLPEGNMDWEIYGKYLPSWYNAVIFRKLWDNTQYPAKSIINAAALDQLGGLGSLLGRTERAVLDDSSIENLKNGLEKWRELLDDSGISADVKEQIKAQVNHITWLLENMDTFGPNPVVREARNLAGLGFQLMSQLPSTIKKI
SIO_010081: COCCU_RS14360
subclass of: SO_0000673
so part of: COCCU_RS14360
location: complement(73792..74403)
location: region:73792-74403:-1
so has part: feature:73792-74403:-1:exon

WP_156233071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73792-74403:-1:exon

COCCU_RS14365
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14365
old locus tag: COCCU_14495
so part of: sequence
location: 75189..76718
location: region:75189-76718:1
so has part: feature:75189-76718:1:exon
subclass of: SO_0000010

position:75189:1
position: 75189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76718:1
position: 76718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75189-76718:1:exon

COCCU_RS14365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14365
old locus tag: COCCU_14495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010627602.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008509 - anion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006820 - anion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DASS family sodium-coupled anion symporter
translation: MTAIITREAPQSQGIPKKRPYTARGLALAAGPALALLTFVLLPDSLAMEPRLLAGVAILMAVWWMTEAIPIPATSLLPVILFPVLGIAEVGPTAAPYANSIVFLILGGTLLGLGVQKWELHRRIALITISFFGTKPPQIIFGLMVSSAFISAWVSNTATAVIMIPIALSIIKLVNEASGRTNVKFAASALLGVAYAITIGGFATLIGQPVNPLLVAYLQETFDITISFGHWMLLGIPFSVIFLVAAWFVLTFLVYRVKSNIVEGGSELFRNELTSLGKTSQEEKKVIAVFLIAVFGWLILPFIARIPQVAEALPFLGRIEDASIAVFVGFLLFLIPTSSEGKAKSGDKSILVWKDAVDLPWGVLLLIGGGMALSTQITGTGLAAWIGEQMSGLGGLPPFAILMVVTLVLILITELTSNTATAAAFFPVMGALAVGIGIDPLLMTVVVSMAIMCAFMLPVATPSNAVAFATGELPIRQMVRTGIWMNMLGLIITAAATVTLVPLVFGVSL
SIO_010081: COCCU_RS14365
subclass of: SO_0000673
so part of: COCCU_RS14365
location: 75189..76718
location: region:75189-76718:1
so has part: feature:75189-76718:1:exon

WP_156233074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75189-76718:1:exon

COCCU_RS14370
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14370
old locus tag: COCCU_14500
so part of: sequence
location: 77138..78361
location: region:77138-78361:1
so has part: feature:77138-78361:1:exon
subclass of: SO_0000010

position:77138:1
position: 77138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78361:1
position: 78361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77138-78361:1:exon

COCCU_RS14370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14370
old locus tag: COCCU_14500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015399516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPSAAAEPAPTYPLTIDSGSWDAGHIQGIAIDEKNGYVYHSFTEMLVKTDLQGNVIGTVEGFTGHLGDLDFNPEDGRVYGSLEYKDEESFYIAIFDVDKINKSGMDAEGSGIVSAVYLEEVVEDFTADMNGDGVFDGNIADTPDHRYGASGIDGVSFGPAFGNPAGEQKLMVAYGIYENNRRDDNNYQVILEYDTSEWSQYEKPLTQANPHQSGPADEDGKYFVPTGNTRYGVQNLSYDESSGLWYMGVYRGSKPEFPNYGLYVVDGVSQPELTELEGQPVEESGLVVPLADMGIVHPGTGITGFEDKADVGIEPIGDGYFYIAEDFDDVSSGEKRESATLHLMEWTGDTPLGFQKVPEGDAPALPQPDEEVPGLSSGKSFPGSSMSSSVFDALLQGSDGFSSSSF
SIO_010081: COCCU_RS14370
subclass of: SO_0000673
so part of: COCCU_RS14370
location: 77138..78361
location: region:77138-78361:1
so has part: feature:77138-78361:1:exon

WP_231598962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77138-78361:1:exon

COCCU_RS14375
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14375
old locus tag: COCCU_14505
so part of: sequence
location: 78565..80412
location: region:78565-80412:1
so has part: feature:78565-80412:1:exon
subclass of: SO_0000010

position:78565:1
position: 78565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80412:1
position: 80412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78565-80412:1:exon

COCCU_RS14375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14375
old locus tag: COCCU_14505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015399517.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphohydrolase
translation: MSSHLAPSALISAALVATLVVPLGAAAPAGASSSQNPDTADQSDSVVFRESFDSVADRLTPRANDPDISEDTVGFTHTEPAGWSVRNDASMSEVGVEDWRGWTFTTPDYWVDAEDQMRDRFARSHEIIAVADSDEFADLPGDHSFETSLTSPQIDVSTLASVDLGFDSHYRSWAGQEATVTASFDGGAAKEVLRLDSTTVVDDYDGSVLNAHESATIEVPQGADSVEFTWNFKAEQNSWYWAIDSVSLTETLPAASGERTSAWVASDIQGHPQDFSHALADFNEVRPDASGLIVAGDIVDSGAAGEWDEIHQVMEEQAEILPGELIAAIGNHESYSADPWEVHENRFLDFAQRDQVWGEYILDGAGPDVPVLVLGQEEQRPPEVPMSEEQLSWFEERLDYWTEQGNQVLVVTHFPLGDTVSASWIPSYHDHHEHNDRLTQILGEHPNAVLLTGHTHYPAELGDWAVQRRTNDGHPDGFWAINTLAMHVEWDARGESTDSASEIVTGDINRGLTIDAYDDRLVVTARDFGAVDEHGAENDINEELRSVTIPNTIGHNGSQAGGDDDSGQPAPSELGSSSSSTTWPFGSSGGALGGLMSAIGGIAAAVANLVTSIFR
SIO_010081: COCCU_RS14375
subclass of: SO_0000673
so part of: COCCU_RS14375
location: 78565..80412
location: region:78565-80412:1
so has part: feature:78565-80412:1:exon

WP_197088529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78565-80412:1:exon

COCCU_RS14380
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14380
pseudo: true
so part of: sequence
location: complement(<80452..>80583)
location: region:80452-80583:-1
so has part: feature:80452-80583:-1:exon
subclass of: SO_0000010

position:80452:-1
position: 80452
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:80583:-1
position: 80583
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80452-80583:-1:exon

COCCU_RS14380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: COCCU_RS14380
subclass of: SO_0000673
so part of: COCCU_RS14380
location: complement(<80452..>80583)
location: region:80452-80583:-1
so has part: feature:80452-80583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80452-80583:-1:exon

COCCU_RS14385
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14385
old locus tag: COCCU_14510
so part of: sequence
location: complement(80727..81671)
location: region:80727-81671:-1
so has part: feature:80727-81671:-1:exon
subclass of: SO_0000010

position:80727:-1
position: 80727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81671:-1
position: 81671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80727-81671:-1:exon

COCCU_RS14385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14385
old locus tag: COCCU_14510
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MVKEVNLNLIRTFCLIYEHQGISRAADELHLSQPTVSYSLKQLRKAFSDQLFYRERGLLHPTPRAQQVYPDLRAALDLIATTEISSTEFGPDNSTREFVLMLSDLGEVVFLPSIQQLFEAKAPAARLRIEPLDVVKVPEKLTSGEIDAAIQTPRFYSDDVERTVIYRDIYVVIASVDHPRIQGSISLEQMSAERFIRIKSSIGHDAPENLLLEAGMQLHTGIIGTRVVSTPGVVMSSELLGIIPTAVIESLGWSDRIQILPNPINAEPMEVSLMSRVKQRRTRPQKWFVNLIEEAVGNMPSDVDGTAGPAPAAG
SIO_010081: COCCU_RS14385
subclass of: SO_0000673
so part of: COCCU_RS14385
location: complement(80727..81671)
location: region:80727-81671:-1
so has part: feature:80727-81671:-1:exon

WP_197088530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80727-81671:-1:exon

COCCU_RS14390
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
gene: mdlC
locus tag: COCCU_RS14390
old locus tag: COCCU_14515
so part of: sequence
location: 81808..83412
location: region:81808-83412:1
so has part: feature:81808-83412:1:exon
subclass of: SO_0000010

position:81808:1
position: 81808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83412:1
position: 83412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81808-83412:1:exon

COCCU_RS14390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
gene: mdlC
locus tag: COCCU_RS14390
old locus tag: COCCU_14515
EC number: 4.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007931284.1
GO function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: benzoylformate decarboxylase
translation: MAPDSKRTVRSVVHDLMLKHGIFRIFGNPGSNELPFLTDLPEEIDYVLGLHEQAVVGMADGFAQASGEVAFVNLHAASGTGNAMGALTNSFYSRSPLVITAGQQVRETIGMHSFLSNVEAPQLTKPLTKWSCEPASASDVPRSFNEAVMQAQASAPGPVYLSIPYDDWEHEANANDELLLRRSYSEEHELSASAVEHLSGLISAAARPAIILGSAVDTVGANSAAITLAENTGADVYLAPSPYRLPFPNKHGQFRGVLPASIRAVNTTLAAYDLVLVIGAPVFRYHQHEPDHYLGEDVEFIHITDDPNEATRAPFGTAIVTDIKRALELLAEAVPPQETAIERPWQSYPATETPVDGIFDPARVFALLREHAPVDTSYVVESTSTNADFWSQMDLQEPASYFWPASGGLGFGLPAAVGVQMALTDRQVIGIIGDGSANYGITALWTAAQYDIPVIFIVLKNGTYGALRWFSQLLDTPDTPGMDVPDIDFLSLAQGYGVQAHAVDTDEDFIAALAGARASGKPHLIEVRTNLTQP
SIO_010081: COCCU_RS14390
subclass of: SO_0000673
so part of: COCCU_RS14390
location: 81808..83412
location: region:81808-83412:1
so has part: feature:81808-83412:1:exon

WP_156233133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81808-83412:1:exon

COCCU_RS14395
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14395
old locus tag: COCCU_14520
so part of: sequence
location: 83459..84808
location: region:83459-84808:1
so has part: feature:83459-84808:1:exon
subclass of: SO_0000010

position:83459:1
position: 83459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84808:1
position: 84808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83459-84808:1:exon

COCCU_RS14395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14395
old locus tag: COCCU_14520
inference: COORDINATES: protein motif:HMM:NF012312.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aromatic acid/H+ symport family MFS transporter
translation: MTNLHLGVPPGATTQPIPVTRVVNDAKITPFHKQVFALCTLLMIVDGYDMISYGSVVQTLIIEWEMTTQQGGYLGAAALIGMLIGGMFVAPLADRFGRKTLLLGCLIASAAASLGCALSFNFETLFIARTLVGIALGAMVPNFVAMTGEFAPQRIRSFAVCFVCSVYSIGGIIAGLLGMFLIPNFGWNSVFWVSVSFIILAPVVWKFLPESPIFLSKLPARRTEFENVIARISPETDPSRVVAVEQPKEQATPIVEIFRKGNGLNTLLIWVVFLMTMLLSYGLNTWLPTLMTSAGYSLGSGLFNLVVLNIGGFLGAVLGGYLADRFNIKKVILAYFIVATLSLASLALTQNELLVNLLLVLAGATTVGTLSVIHALAAEYYPSAIRSTGIGWAAGIGRIGAIAGPVLGGALLGLALPFSQNFLAVAIPGIIGALAIAFVNMSKATKDQG
SIO_010081: COCCU_RS14395
subclass of: SO_0000673
so part of: COCCU_RS14395
location: 83459..84808
location: region:83459-84808:1
so has part: feature:83459-84808:1:exon

WP_197088531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83459-84808:1:exon

COCCU_RS14400
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14400
old locus tag: COCCU_14525
so part of: sequence
location: 84905..86356
location: region:84905-86356:1
so has part: feature:84905-86356:1:exon
subclass of: SO_0000010

position:84905:1
position: 84905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86356:1
position: 86356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84905-86356:1:exon

COCCU_RS14400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14400
old locus tag: COCCU_14525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017615637.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase
translation: MQTQLIIDNKPTDATNGATFERVHPLTGEIVTTSAAATKEDSIKAVESAAEAFTTWSKTGPSERRMILLTAADILEQRSDEFVKAMMEEVGAAAGWAHFNIFLTTQCLREAASLASHITGETIPTDRPGVFSMTVRQAAGVVFSMAPWNAPGVLGMRSIAYPLVCGNTVVFRASEGSPRSHQILAEVLHEAGLPAGALNFISNAPHDAAEISEAIIAHPAVRRVNFTGSTAVGRKIAEACGRHLKKPLLELGGKAPLVILDDADVDGAVNAAVFGAFMYQGQICMSTERIIIDNAVADEFIEKFTARVNELTAGDPRTDKKAAIGPMYRPDSGARINAMIDDALAKGAVVANGGKADGAAMAATVVDHVKPGMTIYTDETFGPITTIIRVNGVDEAIATANDSEYGLAAAVHGTDSTRTLDAALRIEAGHVHVNGATVQNDANAPFGGVKSSGYGHFDGRAVINEFTELKWVTIEPSDQKYPM
SIO_010081: COCCU_RS14400
subclass of: SO_0000673
so part of: COCCU_RS14400
location: 84905..86356
location: region:84905-86356:1
so has part: feature:84905-86356:1:exon

WP_156233082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84905-86356:1:exon

COCCU_RS14405
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14405
old locus tag: COCCU_14535
so part of: sequence
location: complement(87816..89129)
location: region:87816-89129:-1
so has part: feature:87816-89129:-1:exon
subclass of: SO_0000010

position:87816:-1
position: 87816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89129:-1
position: 89129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87816-89129:-1:exon

COCCU_RS14405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14405
old locus tag: COCCU_14535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015938298.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-hydroxy acid oxidase
translation: MSPSNPKTPLPTRAQHRLERQLPKWSELRPLMQFSSLDLDRRRARLNKAADLWDLRAIAQRRTPKVAFDYVDGAANQEISLDRTRQTFRDVEFTPGVLRDVSCVDLSTAIAGGTSALPFGIAPTGFTRMMHSGGEKAGVAAAHNKGIPFTLSTMGTSSIEEVAAAGPDGRRWFQLYLWKEREKSLALIERAAAAGYDTLLVTVDTAVAGARLRDVRNGMTIPPSLTLKTVLDASYRPEWWFNFLTTEPLKFATLSGHTGSIADLVTTMFDPTLTFDDLAWLRQAWKGRLFVKGIQSVDDARRVADCGVDGIVVSNHGGRQLDRAPVPLRLVPDIRSAVGSDLEIILDSGIMNGGDIVAALAAGADFTLIGRGYLYGLMAGGQEGVERAIDILRSEIQVVMQLLGVTAVSELTSDYLCLDREKPLLVSSLEHPTAFSR
SIO_010081: COCCU_RS14405
subclass of: SO_0000673
so part of: COCCU_RS14405
location: complement(87816..89129)
location: region:87816-89129:-1
so has part: feature:87816-89129:-1:exon

WP_156233083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87816-89129:-1:exon

COCCU_RS14410
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14410
old locus tag: COCCU_14540
so part of: sequence
location: complement(89132..90463)
location: region:89132-90463:-1
so has part: feature:89132-90463:-1:exon
subclass of: SO_0000010

position:89132:-1
position: 89132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90463:-1
position: 90463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89132-90463:-1:exon

COCCU_RS14410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14410
old locus tag: COCCU_14540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019175950.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTSHVDTLSSTPPQTSRRARKALIAAMSGTLIEWYDYALYGAAAGLIIGPLFFPDALSTAATLAAFATFAVGFIIRPLGGVVISHIGDRYGRKPAMILTIVLMGAATVGIGLMPTAASIGLWAPILLVVFRLLQGFGAGAELAGAFTLVAETSPKEKRGFHTGLVNATPAAGTTLATLGFLLVSTLPEDVLLGWAWRVPFLFSALLFFIALYIRRELEETPEYVHAVDNREAASHEQKVPLGELFKHSRRPLIAGFLATTGHNAHLYVVTTFSLSYLTATVGMSRSQALTAVVIASVAGIVASPIGGLMTDRFGARKVLGFGGLFGALYAFPLFLMMQTGDLPIVIIGLTIGYGVTLGATMGSQGAFLTNLFPARYRFTGVATAREFNGALIAGTTPLVATVLIQIAGGEIWLAALYIVACSLVTLLAVMIAGTLGNRPFEEN
SIO_010081: COCCU_RS14410
subclass of: SO_0000673
so part of: COCCU_RS14410
location: complement(89132..90463)
location: region:89132-90463:-1
so has part: feature:89132-90463:-1:exon

WP_156233085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89132-90463:-1:exon

COCCU_RS14415
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14415
old locus tag: COCCU_14545
so part of: sequence
location: 90676..91368
location: region:90676-91368:1
so has part: feature:90676-91368:1:exon
subclass of: SO_0000010

position:90676:1
position: 90676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91368:1
position: 91368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90676-91368:1:exon

COCCU_RS14415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14415
old locus tag: COCCU_14545
inference: COORDINATES: protein motif:HMM:NF019349.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MTLINDTPSTPGSFTPIRPASLVASVHAQIREAILSGHMRSGDEVRDSVLATQMHISRAPVREALRLLQQSGLVEKTSNKPYRVKSFDDQDLRELAVLRIAIETTAVRLVVAQHRDITGVTSALASMRQAWEQRSDPELDAADWQFHHAIVNAAGIGRLKARYAELVDQIILAWQLHSQNTPRALDNSIEEHERLIATLQDCLASADPLPIQQALIDHIKSGMGCADLHI
SIO_010081: COCCU_RS14415
subclass of: SO_0000673
so part of: COCCU_RS14415
location: 90676..91368
location: region:90676-91368:1
so has part: feature:90676-91368:1:exon

WP_197088532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90676-91368:1:exon

COCCU_RS14420
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14420
old locus tag: COCCU_14550
so part of: sequence
location: 91403..92290
location: region:91403-92290:1
so has part: feature:91403-92290:1:exon
subclass of: SO_0000010

position:91403:1
position: 91403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92290:1
position: 92290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91403-92290:1:exon

COCCU_RS14420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14420
old locus tag: COCCU_14550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020639421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MKISTLRLPTRTVAARQDGNTFTEISGFTDVGALLQNPDWQDLATAADGPTHDLTDTDLAPVVPRPGKIICVGVNYRQHIIEMGSEMPDHPTIFAKYAESLIGAEDDIQLPPEDSSLDWEGELAIIIGKPGRRIAEADALDHIAGYTVLNDVSMRGFQFRTMQWLQGKTWENSTPVGPAMVTPDELPADATLRTTIDGEVMQETTIDDLLFGAREIIAYLSTIFTLRPGDIIATGTPDGVGFARDPQRFLREGEVLETSIEGIGTLSNRVAAEILSTSKVPAAQGSHRTTPVMSS
SIO_010081: COCCU_RS14420
subclass of: SO_0000673
so part of: COCCU_RS14420
location: 91403..92290
location: region:91403-92290:1
so has part: feature:91403-92290:1:exon

WP_156233089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91403-92290:1:exon

COCCU_RS14425
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14425
old locus tag: COCCU_14555
so part of: sequence
location: 92447..93088
location: region:92447-93088:1
so has part: feature:92447-93088:1:exon
subclass of: SO_0000010

position:92447:1
position: 92447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93088:1
position: 93088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92447-93088:1:exon

COCCU_RS14425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14425
old locus tag: COCCU_14555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018770799.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MPASTSFASESLSERVKRIIVDRVIEGAYPPGTHLVELQLAEEFGVSQAPVREALRELSSTRLVENRPRRGTYVRSISPEELAEIYMVRVALEGTAAFHAFPTLHQDPSPLREALTRMREAVDAGSARGLAKYSTQFHRAIIEASGNRLMVEIWDSLFVEVRTMATIVRGQVDPRAAAESHAPIVEAFETGDAQLCQQLVAEHQQEYSILPHE
SIO_010081: COCCU_RS14425
subclass of: SO_0000673
so part of: COCCU_RS14425
location: 92447..93088
location: region:92447-93088:1
so has part: feature:92447-93088:1:exon

WP_156233091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92447-93088:1:exon

COCCU_RS14430
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14430
old locus tag: COCCU_14560
so part of: sequence
location: 93286..94149
location: region:93286-94149:1
so has part: feature:93286-94149:1:exon
subclass of: SO_0000010

position:93286:1
position: 93286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94149:1
position: 94149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93286-94149:1:exon

COCCU_RS14430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14430
old locus tag: COCCU_14560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018770798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MKFITFRHDGTTRTGVLDTDTAEITPLANGEGLVDVIETWGNGTPEFSTTTLSLEEVELLAPIPRPRRNIFCIGRNYLEHAKEFADSGFDATASASHIPEHPVVFTKAPSTVIGTEAEIDPHLQLTDGLDYEAELGVIIGTGGRNITKDQAMNHVWGYTNINDVTARDMQKKHAQWFLGKSLDTHCPMGPWAVTRDEVGDEPLDLLCTVNGETRQQANTADLIFDIPTIIETISAGITLEPGDVIATGTPVGVGIGFKPPKFLAPGDVVEVSFSKLGTLRNQVGQGQ
SIO_010081: COCCU_RS14430
subclass of: SO_0000673
so part of: COCCU_RS14430
location: 93286..94149
location: region:93286-94149:1
so has part: feature:93286-94149:1:exon

WP_156233093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93286-94149:1:exon

COCCU_RS14435
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14435
old locus tag: COCCU_14565
so part of: sequence
location: 94181..95005
location: region:94181-95005:1
so has part: feature:94181-95005:1:exon
subclass of: SO_0000010

position:94181:1
position: 94181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95005:1
position: 95005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94181-95005:1:exon

COCCU_RS14435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14435
old locus tag: COCCU_14565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018763836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MTHTTELIPTAAHPAELTEVGTRKLFMEITGEGTDVVMVHGLGGATSFYDPIVTELSQQFRFLRYDFNGHGRSPLTGEISIDSLAQELAEVIRTQTTSGKAHVIGHSMGTLIVQQLATTHPELVDKIVLLGPVQAQPDKAKAATRQRAALVRDQGMSAVAEAISRGATADQAAEHNPLLRPLVRQLLLTQNAEAYAQACEALAAATNPDLHAITAPVLLITGDQDAVSTPETNDAIASELKNAQRHTISGIGHWTVLEAPDFVTDYLATFLQDT
SIO_010081: COCCU_RS14435
subclass of: SO_0000673
so part of: COCCU_RS14435
location: 94181..95005
location: region:94181-95005:1
so has part: feature:94181-95005:1:exon

WP_231598963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94181-95005:1:exon

COCCU_RS14440
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14440
old locus tag: COCCU_14570
so part of: sequence
location: 95136..96404
location: region:95136-96404:1
so has part: feature:95136-96404:1:exon
subclass of: SO_0000010

position:95136:1
position: 95136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96404:1
position: 96404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95136-96404:1:exon

COCCU_RS14440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14440
old locus tag: COCCU_14570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018719462.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase family protein
translation: MSKTIFKNVQILDSTGTQPYLGEVLVENERITEVSPGVGKINDPNALVIDGRGQTLMSGLTDAHTHFTWDNRPFDQLGNTPVEEHLLSTIDSAKTYLDYGYTMCFGAASAKARLDVVVRDAINAGRIPGPRYRANGMEIATTAGDLVDSITQTADGVEDMRKVVRATIGLGVDNIKMSISGEEVTGTRSAEDTYITEEELQVAVDEAHRRGVKVCTHARSRDSVYLSLKTGVDVIYHASYIDEQGMDMLEAAKDRVFVAPAINWLVATLEDAGQFGYSHEAAEQAGYAKELDVAVKGVQEMHRRGIRVLPGGDYGFAWTPHGTYARDLAHFVNLFGYTEMEAIIAATSLGGELFGQADELGKVQPGYYADMILVDGNPLEDITILQDIKKITAVMKNGEFHRRPHENMIIPKEAHEPAMATV
SIO_010081: COCCU_RS14440
subclass of: SO_0000673
so part of: COCCU_RS14440
location: 95136..96404
location: region:95136-96404:1
so has part: feature:95136-96404:1:exon

WP_156233095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95136-96404:1:exon

COCCU_RS14800
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14800
pseudo: true
so part of: sequence
location: <96615..96924
location: region:96615-96924:1
so has part: feature:96615-96924:1:exon
subclass of: SO_0000010

position:96615:1
position: 96615
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:96924:1
position: 96924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96615-96924:1:exon

COCCU_RS14800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003853593.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS982 family transposase
SIO_010081: COCCU_RS14800
subclass of: SO_0000673
so part of: COCCU_RS14800
location: <96615..96924
location: region:96615-96924:1
so has part: feature:96615-96924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96615-96924:1:exon

COCCU_RS14450
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14450
old locus tag: COCCU_14575
so part of: sequence
location: complement(97138..98208)
location: region:97138-98208:-1
so has part: feature:97138-98208:-1:exon
subclass of: SO_0000010

position:97138:-1
position: 97138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98208:-1
position: 98208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97138-98208:-1:exon

COCCU_RS14450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14450
old locus tag: COCCU_14575
EC number: 3.1.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003853595.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease
translation: MTAWVIRSGQYGERAEWAWEKGYSGAGWQAVGPELLSCKTREEVQSYAAEKYAHKPQALPNITAQLWMLLGRITIGDLIVMPIKQTREIALGWASTSLQYLHNEEDPSKRLVIGVNWVNRVPRTAVKQDLLYSLGATLTVFSPSRNQAEDRLKALLETGTDPGMRQESLEKAAAVLSSVAAGDTGNDPDVPAIQQDIEEMALDQISELISQEFTGHGLTRLIGDILRAEGFNVEESPEGPDGGIDIIAGRGLLGLESPKILVQVKTPKVDRPVVQQLTGLVSSHEADYGLIVAWGGLTSDARREVMSKRFRLKVWDDQDIIHAVLSNYEKLSSTTTQALPLKQIWVPGETADTALE
SIO_010081: COCCU_RS14450
subclass of: SO_0000673
so part of: COCCU_RS14450
location: complement(97138..98208)
location: region:97138-98208:-1
so has part: feature:97138-98208:-1:exon

WP_156233097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97138-98208:-1:exon

COCCU_RS14455
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14455
old locus tag: COCCU_14580
so part of: sequence
location: complement(98558..99112)
location: region:98558-99112:-1
so has part: feature:98558-99112:-1:exon
subclass of: SO_0000010

position:98558:-1
position: 98558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99112:-1
position: 99112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98558-99112:-1:exon

COCCU_RS14455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14455
old locus tag: COCCU_14580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014928894.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDGLFPAPAMATTVVVHTSRIPVIPDPDLPLTTAVQHRFWKHVVRGEGDRCWIWIGAISSPDGYGRFTWQKDRHRRTVSAHRVALMIAHGGELPQDLVGEHYCCEPLCVRVGDGHLRLTTQATNLARAVALGRHVSNRETVASHDRAQRSYRIRDAVLSGWDDDTLHAAQGGIPTPENQPGLW
SIO_010081: COCCU_RS14455
subclass of: SO_0000673
so part of: COCCU_RS14455
location: complement(98558..99112)
location: region:98558-99112:-1
so has part: feature:98558-99112:-1:exon

WP_156233099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98558-99112:-1:exon

COCCU_RS14460
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14460
old locus tag: COCCU_14585
so part of: sequence
location: complement(99138..99566)
location: region:99138-99566:-1
so has part: feature:99138-99566:-1:exon
subclass of: SO_0000010

position:99138:-1
position: 99138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99566:-1
position: 99566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99138-99566:-1:exon

COCCU_RS14460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14460
old locus tag: COCCU_14585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNARQRARLAVQVDQDKLKRQVDLFTEALTAVDVRDQAEIRLGRALNELRGMGLTRADIAQRTGLAPREVSAAMRAATEAETLEQEGETTTPEDTDLTASATPVEGADDTPESGDTGADQGVGNETELKTPEARSVDPAPAQ
SIO_010081: COCCU_RS14460
subclass of: SO_0000673
so part of: COCCU_RS14460
location: complement(99138..99566)
location: region:99138-99566:-1
so has part: feature:99138-99566:-1:exon

WP_156233101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99138-99566:-1:exon

COCCU_RS14465
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14465
old locus tag: COCCU_14590
so part of: sequence
location: 99857..103867
location: region:99857-103867:1
so has part: feature:99857-103867:1:exon
subclass of: SO_0000010

position:99857:1
position: 99857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103867:1
position: 103867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99857-103867:1:exon

COCCU_RS14465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14465
old locus tag: COCCU_14590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402291.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase domain-containing protein
translation: MMSVRVINAGDGYAYLLDSVAAHDDTSSAGTSLSDYYQATGTPPGRWFGHGITGLGATTIGTGVVVGEVQMAALYGEGLHPDADHQMLHEGATIKDVQLGRRFPLYTQGVPVLGAIKQAEAQFLSAHQRRPTTKERTALGLEVARPHYETAHGVTTSSPREVLAWLNEEKNKVKQATSGVDLTFSPQKSVSVLWALGDEETRQAIEEIHQETVTDCLSWIEDHVLFTRTGHRGERQLKARGMIAATFVHFDTRAGDPDLHTHCLISNKVQADPETPGMSRGDVDKWRSVDASHLLKNSALIGQRYQHLLTQRLNQRLGLEFRPRVTAEEKQPVWEVAGIDDGLIEQFSSRRTMARPVYESYAADYASTHGHAPSDRVRYRLWQQAILDTRDAKKPAQSLAEHRTRWAALADGQVLSAQRLAATAPARQVFPEAGTEAYQEAVAFLAHQATEDTRGRRAEFYQRHLTTSITMRLHQWRFTSEEVAEQARQDAVDWAREHLIVALTPPADESLPAALLREDGRVIDQDADSVMLTAKATLAEEARVLDAIDEPTAYLATHTSVTQALEKHAAESGLVLNQGQQLLVSHLTESGAQLTAGVGPAGTGKTAAMAVVASLWQAHDRQVIALAPSATAAQHLGADIGTEGHTLASLTYRWRGIIGNHPQSLDHLGVSLTPGDMLLVDEAGMATTADLAALVEIAQTSGAVVRLVGDPHQLDAVETGGLFRTLVKRDQSVELDQVMRMGADTDQAHAGLRLRHGDGAGLDLYHQRGWVHHGARVDMVAGAAQAHLADEQAGHTGILIASTRADVDTANHIIRDTRCERGLVDTEGPQVTLGTGHQAAAGDVILTRRNQTVGGQRVLNGQRFTITQVHADGSLVVTGEQRRRPLVLPGSYVAEHVQLGYAATVHRAQGVTVDITRAIVGPGTDRRGLYVAATRGKKQNHLYVTEDTRIDLESEDGHWHMSGEHHAPNYRDILKDIMARDDGHDSAHDLHRAELAHATSPERTKQLLATATGLLTTSWRRTQLEPEVRDLLDSLPATLTASVDEDQAVERIATSAVRLARHGINYRDLVGEATANLEGARDVAAVIAHRLDHYLPDTQPELAALPPRHIGHDVELYDWAHTLHAELAGDTARTLRPLDAPLPERGEIHDRDFRHTDLRGLELSGVKFIDCDFRGAAFDDTDFHQVTFKSCQLQGASFTSARFGVDDGPFRVSPLIHCDLDGADFRDAQLVRLSVTRCSLTNACFTGTILGGHFHSADFTGVDFTGAQVNAQVGVSDCVLDAHAPAALHQAQAETVADRERARQTRRNDDSAAQETYAAPTIHQQVFDHTPDGPEL
SIO_010081: COCCU_RS14465
subclass of: SO_0000673
so part of: COCCU_RS14465
location: 99857..103867
location: region:99857-103867:1
so has part: feature:99857-103867:1:exon

WP_197088533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99857-103867:1:exon

COCCU_RS14470
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14470
old locus tag: COCCU_14595
so part of: sequence
location: 104101..104688
location: region:104101-104688:1
so has part: feature:104101-104688:1:exon
subclass of: SO_0000010

position:104101:1
position: 104101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104688:1
position: 104688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104101-104688:1:exon

COCCU_RS14470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14470
old locus tag: COCCU_14595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402224.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIIGIVNVKGGVGKTTSAIYLGTALAQMGRDVTVIDMDHQGSASDWADRAADAGTPLPFPVEISNAKRLGRYVKSLPRDMVVILDTPPGDPQTIDSAVSVSDFVLVPTRSSGIETSRVWDTLPSLEGIPHAVLITSARLGTKSLDLLLAILDEEEVPRFRSVIPLRESVPASWGNVPDRLEGYDSVGREIVETIK
SIO_010081: COCCU_RS14470
subclass of: SO_0000673
so part of: COCCU_RS14470
location: 104101..104688
location: region:104101-104688:1
so has part: feature:104101-104688:1:exon

WP_156233103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104101-104688:1:exon

COCCU_RS14475
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14475
old locus tag: COCCU_14600
so part of: sequence
location: 104685..104921
location: region:104685-104921:1
so has part: feature:104685-104921:1:exon
subclass of: SO_0000010

position:104685:1
position: 104685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104921:1
position: 104921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104685-104921:1:exon

COCCU_RS14475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14475
old locus tag: COCCU_14600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTKKHNLGPSKPRQRRSISEAFIDTEAAAKPEASTMFNVRMTTSVHRRLKFQAFKEDRTMKEIVEESVLKYLNEHES
SIO_010081: COCCU_RS14475
subclass of: SO_0000673
so part of: COCCU_RS14475
location: 104685..104921
location: region:104685-104921:1
so has part: feature:104685-104921:1:exon

WP_156233105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104685-104921:1:exon

COCCU_RS14480
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14480
old locus tag: COCCU_14605
so part of: sequence
location: 105107..106081
location: region:105107-106081:1
so has part: feature:105107-106081:1:exon
subclass of: SO_0000010

position:105107:1
position: 105107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106081:1
position: 106081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105107-106081:1:exon

COCCU_RS14480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14480
old locus tag: COCCU_14605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018023049.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MSDHNPNAGDKNNTPNPIADLEARLAEIEAGFLDPYAFSSRTLIQATFPHSARAGKEITLKNGAMTVTMYSPNGLPHGVYPRLIMCWLTREAIRRRDLPVEEARTIPLGGSLSQFMRDVGIKSASGGKNGTITALRKQLKSLFSTFISIKVEDHEYRDGKQVAFDQLDNTLIAESALLWWDPKQPEQLSMQNSSVTLTAAFYRELTCSAVPLDVNVLRQIRRSPLAIDIYCWLTYRLSYHRGFTVVTWEQLRQQFGAGYPDTVRGRSNWRLKVAGALERVLEVWPEASVTVTANGVMLKPGSPSVPVRVQEEIKKRYGLGENPF
SIO_010081: COCCU_RS14480
subclass of: SO_0000673
so part of: COCCU_RS14480
location: 105107..106081
location: region:105107-106081:1
so has part: feature:105107-106081:1:exon

WP_156233107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105107-106081:1:exon

COCCU_RS14485
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14485
old locus tag: COCCU_14610
so part of: sequence
location: 106565..107065
location: region:106565-107065:1
so has part: feature:106565-107065:1:exon
subclass of: SO_0000010

position:106565:1
position: 106565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107065:1
position: 107065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106565-107065:1:exon

COCCU_RS14485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14485
old locus tag: COCCU_14610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006438260.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SRPBCC family protein
translation: MNQTLTTDTVERVLHALPEDIYTLVSDITRTPELSPEIIRTRWIRGATGPEVGARFLAVNSLGGIWTWPNFPVVIAAEPGREFAISRTEPFFGTLEWRYTFFSQGEGSTLVRESYTVTRPLTRAAWFMIEKLIGSTDRAGELRAGMTTTLGRLAELVERPVPPPQR
SIO_010081: COCCU_RS14485
subclass of: SO_0000673
so part of: COCCU_RS14485
location: 106565..107065
location: region:106565-107065:1
so has part: feature:106565-107065:1:exon

WP_156233109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106565-107065:1:exon

COCCU_RS14495
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14495
old locus tag: COCCU_14615
so part of: sequence
location: 107638..107883
location: region:107638-107883:1
so has part: feature:107638-107883:1:exon
subclass of: SO_0000010

position:107638:1
position: 107638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107883:1
position: 107883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107638-107883:1:exon

COCCU_RS14495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14495
old locus tag: COCCU_14615
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGQSNARDHLDNFSWWVGRADVSDREANLMDLAILKEELDDMISMRARNAVEMHGLTWAQVGRALGISRQAASQRFGYRK
SIO_010081: COCCU_RS14495
subclass of: SO_0000673
so part of: COCCU_RS14495
location: 107638..107883
location: region:107638-107883:1
so has part: feature:107638-107883:1:exon

WP_156233111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107638-107883:1:exon

COCCU_RS14500
type: Gene
subclass of: SO_0000704
RO_0002162: 2675219
locus tag: COCCU_RS14500
pseudo: true
so part of: sequence
location: complement(108152..>108587)
location: region:108152-108587:-1
so has part: feature:108152-108587:-1:exon
subclass of: SO_0000010

position:108152:-1
position: 108152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108587:-1
position: 108587
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108152-108587:-1:exon

COCCU_RS14500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2675219
locus tag: COCCU_RS14500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: COCCU_RS14500
subclass of: SO_0000673
so part of: COCCU_RS14500
location: complement(108152..>108587)
location: region:108152-108587:-1
so has part: feature:108152-108587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108152-108587:-1:exon