Komagataeibacter nataicola strain RZS01 plasmid pKNA04, complete sequence.
type: Entry
definition: Komagataeibacter nataicola strain RZS01 plasmid pKNA04, complete sequence.
sequence version: NZ_CP019879.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP019879.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN06368327
keyword: RefSeq
source: Komagataeibacter nataicola
organism: Komagataeibacter nataicola
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP019879.1.\nBacteria available from Chemicobiology and Functional Materials\nInstitute of Nanjing University of Science and Technology (No.200,\nXiaolingwei Road, Nanjing, China).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Coverage :: 76X\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 04:44:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,601\nCDSs (total) :: 3,523\nGenes (coding) :: 3,405\nCDSs (with protein) :: 3,405\nGenes (RNA) :: 78\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 59\nncRNAs :: 4\nPseudo Genes (total) :: 118\nCDSs (without protein) :: 118\nPseudo Genes (ambiguous residues) :: 0 of 118\nPseudo Genes (frameshifted) :: 57 of 118\nPseudo Genes (incomplete) :: 81 of 118\nPseudo Genes (internal stop) :: 21 of 118\nPseudo Genes (multiple problems) :: 36 of 118\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 30554
topology: circular
so has quality: SO_0000988
location: 1..30554
location: region:1-30554:1
RO_0002162: 265960

NZ_CP019879
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN06368327
type: BioSample
SIO_000068: biosample

1
title: zhang
author: Zhang, H.
journal: Unpublished

2
title: Direct Submission
author: Zhang, H.
journal: Submitted (15-FEB-2017) Chemicobiolgy and Functional Materials Institute, Nanjing University of Science and Technology, No. 200, Xiaolingwei Road, Nanjing, Jiangsu 210094, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30554:1
position: 30554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30554:1:source
so part of: sequence
organism: Komagataeibacter nataicola
mol type: genomic DNA
strain: RZS01
plasmid: pKNA04
collection date: 2008-05-11

265960
type: Taxonomy
SIO_000068: taxonomy

B0W47_RS17035
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
gene: tnpB
locus tag: B0W47_RS17035
old locus tag: B0W47_17355
so part of: sequence
location: 49..342
location: region:49-342:1
so has part: feature:49-342:1:exon
subclass of: SO_0000010

position:49:1
position: 49
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342:1
position: 342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49-342:1:exon

B0W47_RS17035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
gene: tnpB
locus tag: B0W47_RS17035
old locus tag: B0W47_17355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MRLGMPGLALKVQEALGRDPFAGDVYAFRGRRGDLVKLIWHDGIGLSLYAKRIERGHFLWPSAKDGAIHLSPSQLTCLLEGVDWRNPQKTWRPELAG
SIO_010081: B0W47_RS17035
subclass of: SO_0000673
so part of: B0W47_RS17035
location: 49..342
location: region:49-342:1
so has part: feature:49-342:1:exon

WP_048884106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49-342:1:exon

B0W47_RS17040
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17040
old locus tag: B0W47_17360
pseudo: true
so part of: sequence
location: 408..>1939
location: region:408-1939:1
so has part: feature:408-1939:1:exon
subclass of: SO_0000010

position:408:1
position: 408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1939:1
position: 1939
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408-1939:1:exon

B0W47_RS17040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17040
old locus tag: B0W47_17360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012044973.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: B0W47_RS17040
subclass of: SO_0000673
so part of: B0W47_RS17040
location: 408..>1939
location: region:408-1939:1
so has part: feature:408-1939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408-1939:1:exon

B0W47_RS17045
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17045
old locus tag: B0W47_17365
pseudo: true
so part of: sequence
location: complement(<1910..2890)
location: region:1910-2890:-1
so has part: feature:1910-2890:-1:exon
subclass of: SO_0000010

position:1910:-1
position: 1910
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2890:-1
position: 2890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1910-2890:-1:exon

B0W47_RS17045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17045
old locus tag: B0W47_17365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010516402.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cation:proton antiporter
SIO_010081: B0W47_RS17045
subclass of: SO_0000673
so part of: B0W47_RS17045
location: complement(<1910..2890)
location: region:1910-2890:-1
so has part: feature:1910-2890:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1910-2890:-1:exon

B0W47_RS19185
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS19185
old locus tag: B0W47_17370
pseudo: true
so part of: sequence
location: complement(<3309..3569)
location: region:3309-3569:-1
so has part: feature:3309-3569:-1:exon
subclass of: SO_0000010

position:3309:-1
position: 3309
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:3569:-1
position: 3569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3309-3569:-1:exon

B0W47_RS19185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS19185
old locus tag: B0W47_17370
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: B0W47_RS19185
subclass of: SO_0000673
so part of: B0W47_RS19185
location: complement(<3309..3569)
location: region:3309-3569:-1
so has part: feature:3309-3569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3309-3569:-1:exon

B0W47_RS17055
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17055
old locus tag: B0W47_17375
so part of: sequence
location: 3941..5212
location: region:3941-5212:1
so has part: feature:3941-5212:1:exon
subclass of: SO_0000010

position:3941:1
position: 3941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5212:1
position: 5212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3941-5212:1:exon

B0W47_RS17055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17055
old locus tag: B0W47_17375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019087017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chloride channel protein
translation: MYCTGAVLIGIISVIFAHLGDWAAELRYHIVTRNPWSMLVIAPLGLVAISWLTRLLFNGAQGSGIPQTIATLHMHNFVLVDRILTLRIALGKILMTCLGLICGASIGREGPSVQIGASIMHAFSRAMGQHNNVTRHGMILAGGAAGMAAAFNTPLAGVVFAIEELAHSFEQKASGRTLTVIIFSGITAIALLGNYTYFGRTNVFIPVGRAWLAVLVCGVSGGLAGGIFARLVIRLSKGLPAFLGRFSRRFPLVFIALCGLLLALIGLASDGATYGTGYLQARGIVDGSLHYPASFFLLKYISMLITFCSGIPGGMFAPSLAIGAGMGGWVEQFLPHTSPGGVVLLGMAAYFCGVAQSPLTATIIVMEICDNQQVTLALLATAFLAFGVSRMVCPRPLYSALANGFLEKTERMARQASHDKLEK
SIO_010081: B0W47_RS17055
subclass of: SO_0000673
so part of: B0W47_RS17055
location: 3941..5212
location: region:3941-5212:1
so has part: feature:3941-5212:1:exon

WP_078528602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3941-5212:1:exon

B0W47_RS17065
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17065
old locus tag: B0W47_17385
so part of: sequence
location: 5909..6178
location: region:5909-6178:1
so has part: feature:5909-6178:1:exon
subclass of: SO_0000010

position:5909:1
position: 5909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6178:1
position: 6178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5909-6178:1:exon

B0W47_RS17065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17065
old locus tag: B0W47_17385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVTQNKPTHEIMDTDAMMVAFLREYGLSGARERARHHIGRCVEAGLEDDAAFWMRVSNQLENLASSDYGPGNLFTPSGQISPTATRPG
SIO_010081: B0W47_RS17065
subclass of: SO_0000673
so part of: B0W47_RS17065
location: 5909..6178
location: region:5909-6178:1
so has part: feature:5909-6178:1:exon

WP_078528605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5909-6178:1:exon

B0W47_RS17070
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17070
old locus tag: B0W47_17390
so part of: sequence
location: 6190..6585
location: region:6190-6585:1
so has part: feature:6190-6585:1:exon
subclass of: SO_0000010

position:6190:1
position: 6190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6585:1
position: 6585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6190-6585:1:exon

B0W47_RS17070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17070
old locus tag: B0W47_17390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010511654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rrf2 family transcriptional regulator
translation: MRTDYAFRVLIHLARHGHTQNRMTVRHIAERHNISHNHLVKVVNDLCHHGLLVGTRGRNGGVSLARSPKDINVGHVIRLMETEGEVMTGCAPLQGRPCILADACRLRHLTRQATDAFMAILDGMSVHDLLS
SIO_010081: B0W47_RS17070
subclass of: SO_0000673
so part of: B0W47_RS17070
location: 6190..6585
location: region:6190-6585:1
so has part: feature:6190-6585:1:exon

WP_236944718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6190-6585:1:exon

B0W47_RS17075
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17075
old locus tag: B0W47_17395
so part of: sequence
location: complement(6594..7262)
location: region:6594-7262:-1
so has part: feature:6594-7262:-1:exon
subclass of: SO_0000010

position:6594:-1
position: 6594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7262:-1
position: 7262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6594-7262:-1:exon

B0W47_RS17075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17075
old locus tag: B0W47_17395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512507.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6118 family protein
translation: MSETDPAARAFEDLCAEMTVLRRSVEALPQAWRDNRPPDYTPDLARLVKALNDVGARMKAIEASPTLKMTPQAYGQGVRQAGLSVCQDMQAAFHTAIRAVQVERQQLTDIVGQARTQDRQNWWVLKVGLACLAVGIGFSPILTYLLPSSVGTRVASFIVGGQDRWESGALMMEADNPESLRHMVRANRLVDASQDRIAACKKTANETKMDQPCVLTIRPDGS
SIO_010081: B0W47_RS17075
subclass of: SO_0000673
so part of: B0W47_RS17075
location: complement(6594..7262)
location: region:6594-7262:-1
so has part: feature:6594-7262:-1:exon

WP_078528611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6594-7262:-1:exon

B0W47_RS18190
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS18190
so part of: sequence
location: complement(7288..7443)
location: region:7288-7443:-1
so has part: feature:7288-7443:-1:exon
subclass of: SO_0000010

position:7288:-1
position: 7288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7443:-1
position: 7443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7288-7443:-1:exon

B0W47_RS18190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS18190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAMMAFQSEVERYFSERAARTTPAHAKALLERIGTKGQIRDDDRLDVPEN
SIO_010081: B0W47_RS18190
subclass of: SO_0000673
so part of: B0W47_RS18190
location: complement(7288..7443)
location: region:7288-7443:-1
so has part: feature:7288-7443:-1:exon

WP_236944719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7288-7443:-1:exon

B0W47_RS17080
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17080
old locus tag: B0W47_17400
so part of: sequence
location: complement(7462..7785)
location: region:7462-7785:-1
so has part: feature:7462-7785:-1:exon
subclass of: SO_0000010

position:7462:-1
position: 7462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7785:-1
position: 7785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7462-7785:-1:exon

B0W47_RS17080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17080
old locus tag: B0W47_17400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004356768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MPSGKAVPKRKKVRLPLRSDYTKQFEKDFQRLSRSGKYNMARLKVVMLLLIANEDPLGAEWLDHPLKGDWADHQECHVGGDFLLIYQKGEEKIVFVRTGSHADLFEN
SIO_010081: B0W47_RS17080
subclass of: SO_0000673
so part of: B0W47_RS17080
location: complement(7462..7785)
location: region:7462-7785:-1
so has part: feature:7462-7785:-1:exon

WP_078528614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7462-7785:-1:exon

B0W47_RS17085
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17085
old locus tag: B0W47_17405
so part of: sequence
location: complement(7727..8029)
location: region:7727-8029:-1
so has part: feature:7727-8029:-1:exon
subclass of: SO_0000010

position:7727:-1
position: 7727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8029:-1
position: 8029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7727-8029:-1:exon

B0W47_RS17085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17085
old locus tag: B0W47_17405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017503755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MSGFVRARIDETLKEEASVVLDAIGLTVSDVVRMLLTRIAREKALPVDLVVPNAATIAAMEEGRMLLKDRTRGFENAQEMFDALGESGSKKKKSKTAASI
SIO_010081: B0W47_RS17085
subclass of: SO_0000673
so part of: B0W47_RS17085
location: complement(7727..8029)
location: region:7727-8029:-1
so has part: feature:7727-8029:-1:exon

WP_078528638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7727-8029:-1:exon

B0W47_RS17090
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
gene: traA
locus tag: B0W47_RS17090
old locus tag: B0W47_17410
so part of: sequence
location: complement(8115..11498)
location: region:8115-11498:-1
so has part: feature:8115-11498:-1:exon
subclass of: SO_0000010

position:8115:-1
position: 8115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11498:-1
position: 11498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8115-11498:-1:exon

B0W47_RS17090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
gene: traA
locus tag: B0W47_RS17090
old locus tag: B0W47_17410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092373.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIYHLHAKVISRATGRSAVAAAAYRAASRLHDLRLDRDHDFSNKSGVVHSEILLPDGAPERFLDRATLWNEVEAIEKRKDAQLAREVEFSIPREMTQAQGIALARDFVREQFVERGMVADLNVHWDIGEDGQAKPHAHVMLSTRRIEVKTGEAVHGRRDGIPHPERGGRGAYNLAPDPGPDGAERGRRSTQAHDPSADRDPGDAAWHPAEALDAGEALAASGRTARLIAAARLRHEGLGLAQNQPSIGFGAKERSWNDKDLLLTWRERWASLANERLAELDLDVRIDHRSFAAQGIDLEPQNKIGPAGMRREERGEDAERVADHLEIARRNGERLLAEPHVALEVLTRQQSTFTRQDLARFVDRHTADAEQFSAVMVQVEACPDLVAIGKDGHGRERFSTREMIGVEQRLEKVSLAMGQSQGHAVPLAVRRVAMARDGLGDEQALAVGEVTKSRDLSVVVGYAGTGKSTMLGVARAAWEEAGYRVRGAALSGIAAEGLEAGSGIESRTLASLDRAWARGFDLLERGDVLVVDEAGMVGSRQMERVLSVARGAGAKVVLVGDPEQLQAIEAGGAFRAVAERVGSVEITTVRRQREDWQQAATKELATGRTDRALERYEAAGLVRGHETLEEARAGVVAGWDEARQAAPEDSQIMLAHRRVDVRALNEAARAIRREAGELGDDVLVPTAQGERVFADGERIYFLRNDRELGVKNGTLGTVRGIEGSAEAGDLALSVQLDGPGRTGTGRVVSVSVADYDALDHGYAATIHKSQGVTVDRAHVLATGSMDRHGAYVALSRHRESVSVHWGRDDVGDRDGLVWRLSRERLKDTTLDYPQVRDQDAGFARRRGLHVPESEIVVGREQAASGSRKDRQAEAVRTPDPAPAQRKRRMFDGLDLSVRGRGRTAEKDVSAGMDARSGKGESGVGREAPASPFAGLRLPRVQRAQAPAGLGGFVPGGDPLHQAVEQYARVVRDIGRMVEQDLPVLEHQKKAWLDASTALEWLRPGAVIALETAVKHEPEIRQALYGLEGPARARRLVEGLEHEDKVRKSPELRAARFVKVWDGLSREQQGVALKELKRDVQLESLLRQKGHELGVRKGSTLDHGLQPQRTRSLSRSRSRDRGMDMGM
SIO_010081: B0W47_RS17090
subclass of: SO_0000673
so part of: B0W47_RS17090
location: complement(8115..11498)
location: region:8115-11498:-1
so has part: feature:8115-11498:-1:exon

WP_078528617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8115-11498:-1:exon

B0W47_RS17095
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17095
old locus tag: B0W47_17415
so part of: sequence
location: 11595..11954
location: region:11595-11954:1
so has part: feature:11595-11954:1:exon
subclass of: SO_0000010

position:11595:1
position: 11595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11954:1
position: 11954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11595-11954:1:exon

B0W47_RS17095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17095
old locus tag: B0W47_17415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010665981.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MSDAVLACVVEYATDQQDKGPKMRRPRDIDAELKTLQEKAKQLKAQRTIQLGELVEATGADTLSIEALAGVLLAAVEQADGKPEAVARWTERGTAFFQDGAKKGGRKGTGNDQNGSAGA
SIO_010081: B0W47_RS17095
subclass of: SO_0000673
so part of: B0W47_RS17095
location: 11595..11954
location: region:11595-11954:1
so has part: feature:11595-11954:1:exon

WP_205836739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11595-11954:1:exon

B0W47_RS17100
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17100
old locus tag: B0W47_17420
so part of: sequence
location: 12019..12258
location: region:12019-12258:1
so has part: feature:12019-12258:1:exon
subclass of: SO_0000010

position:12019:1
position: 12019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12258:1
position: 12258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12019-12258:1:exon

B0W47_RS17100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17100
old locus tag: B0W47_17420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396251.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MRDWAKARRERTHHLIELGGLVQKAGLVDLTDDDRATLLGAFLDIAGQLQGGNDTAPTDLKTRWRRAGLHAFDRDREQD
SIO_010081: B0W47_RS17100
subclass of: SO_0000673
so part of: B0W47_RS17100
location: 12019..12258
location: region:12019-12258:1
so has part: feature:12019-12258:1:exon

WP_078528620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12019-12258:1:exon

B0W47_RS17105
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17105
old locus tag: B0W47_17425
pseudo: true
so part of: sequence
location: 12337..12967
location: region:12337-12967:1
so has part: feature:12337-12967:1:exon
subclass of: SO_0000010

position:12337:1
position: 12337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12967:1
position: 12967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12337-12967:1:exon

B0W47_RS17105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17105
old locus tag: B0W47_17425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512301.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CatB-related O-acetyltransferase
SIO_010081: B0W47_RS17105
subclass of: SO_0000673
so part of: B0W47_RS17105
location: 12337..12967
location: region:12337-12967:1
so has part: feature:12337-12967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12337-12967:1:exon

B0W47_RS18195
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS18195
old locus tag: B0W47_17430
so part of: sequence
location: 12964..13299
location: region:12964-13299:1
so has part: feature:12964-13299:1:exon
subclass of: SO_0000010

position:12964:1
position: 12964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13299:1
position: 13299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12964-13299:1:exon

B0W47_RS18195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS18195
old locus tag: B0W47_17430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553980.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMQKLFLLLVVLPILFRPASGFAQGRGDWLPQSDVKSPYAALSVPTGLKPVPDSLASLLTKGYRITTTADYGGSGALFTLVWQRQTVICVLTAPVPGTDQNVPTSRCWALN
SIO_010081: B0W47_RS18195
subclass of: SO_0000673
so part of: B0W47_RS18195
location: 12964..13299
location: region:12964-13299:1
so has part: feature:12964-13299:1:exon

WP_110571435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12964-13299:1:exon

B0W47_RS18200
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
gene: traD
locus tag: B0W47_RS18200
old locus tag: B0W47_17435
pseudo: true
so part of: sequence
location: <13351..13557
location: region:13351-13557:1
so has part: feature:13351-13557:1:exon
subclass of: SO_0000010

position:13351:1
position: 13351
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:13557:1
position: 13557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13351-13557:1:exon

B0W47_RS18200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
gene: traD
locus tag: B0W47_RS18200
old locus tag: B0W47_17435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092369.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
SIO_010081: B0W47_RS18200
subclass of: SO_0000673
so part of: B0W47_RS18200
location: <13351..13557
location: region:13351-13557:1
so has part: feature:13351-13557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13351-13557:1:exon

B0W47_RS17115
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17115
old locus tag: B0W47_17440
so part of: sequence
location: 13523..14026
location: region:13523-14026:1
so has part: feature:13523-14026:1:exon
subclass of: SO_0000010

position:13523:1
position: 13523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14026:1
position: 14026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13523-14026:1:exon

B0W47_RS17115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17115
old locus tag: B0W47_17440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092368.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucR family transcriptional regulator
translation: MTDHEIRSSGSDTVRELTTRIVTAYVSSHTVPADTLPGLIATVFQALGSLRQATTETPTLVPAVPVKKSVFPDYIVCLEDGKKLKMLKRHLQSSYGMTPQQYRAKWGLPESYPMTAPSYAARRSVLAQEIGLGRTIKATPKPSDVSEAEVPVTRLPEKKPGRRPKLA
SIO_010081: B0W47_RS17115
subclass of: SO_0000673
so part of: B0W47_RS17115
location: 13523..14026
location: region:13523-14026:1
so has part: feature:13523-14026:1:exon

WP_078528623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13523-14026:1:exon

B0W47_RS17120
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17120
old locus tag: B0W47_17445
pseudo: true
so part of: sequence
location: complement(14527..>14772)
location: region:14527-14772:-1
so has part: feature:14527-14772:-1:exon
subclass of: SO_0000010

position:14527:-1
position: 14527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14772:-1
position: 14772
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14527-14772:-1:exon

B0W47_RS17120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17120
old locus tag: B0W47_17445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006560442.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: B0W47_RS17120
subclass of: SO_0000673
so part of: B0W47_RS17120
location: complement(14527..>14772)
location: region:14527-14772:-1
so has part: feature:14527-14772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14527-14772:-1:exon

B0W47_RS17125
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17125
old locus tag: B0W47_17450
so part of: sequence
location: 15477..16577
location: region:15477-16577:1
so has part: feature:15477-16577:1:exon
subclass of: SO_0000010

position:15477:1
position: 15477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16577:1
position: 16577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15477-16577:1:exon

B0W47_RS17125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17125
old locus tag: B0W47_17450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010511350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MKPRIKATRQRNPELALTVSETPNVDGRSVLLPERYPTPDLFICDVLDAIPKDDMASMEHPIFSLATKPDRRIFRYEHNGNTVEIVPSVKGLATIHDKDILIYCISQLIAKMNQGEQPNRTLHLTARDLLVWTNRQTDGDGYKRLRSAFERLAGTRITTNIKADGEEITEGFGLINEWRIVRKTNSGQMSEIKVTLSEWLFRMIEGRSVLTLHRDYFRLRKPLERRIYELARKHCGAQEKWVVSIEILQKKTGASSHIRVFRSMLRDLAINNHLPDYAVEINSNTVTFRNRETMDTVKVIEPKLQRPFVDPEGFHDARGVAPGYDVYALYDEWVSWWNDSGQPELQNPSAAFVGFCRNRHKRNPIR
SIO_010081: B0W47_RS17125
subclass of: SO_0000673
so part of: B0W47_RS17125
location: 15477..16577
location: region:15477-16577:1
so has part: feature:15477-16577:1:exon

WP_078528626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15477-16577:1:exon

B0W47_RS17130
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17130
old locus tag: B0W47_17455
so part of: sequence
location: complement(16621..16872)
location: region:16621-16872:-1
so has part: feature:16621-16872:-1:exon
subclass of: SO_0000010

position:16621:-1
position: 16621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16872:-1
position: 16872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16621-16872:-1:exon

B0W47_RS17130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17130
old locus tag: B0W47_17455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006559415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDRAKGSGEAMPAPAPKPDISSRKPTLNGRKGTKLIGGHFSPEVSTQLRIIAAEEGTTVQSLLGEALDDLFVKKGRSRIVSG
SIO_010081: B0W47_RS17130
subclass of: SO_0000673
so part of: B0W47_RS17130
location: complement(16621..16872)
location: region:16621-16872:-1
so has part: feature:16621-16872:-1:exon

WP_078528643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16621-16872:-1:exon

B0W47_RS17135
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17135
old locus tag: B0W47_17460
so part of: sequence
location: complement(16899..17534)
location: region:16899-17534:-1
so has part: feature:16899-17534:-1:exon
subclass of: SO_0000010

position:16899:-1
position: 16899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17534:-1
position: 17534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16899-17534:-1:exon

B0W47_RS17135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17135
old locus tag: B0W47_17460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006559416.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MKVLAVLSQKGGVGKTTLATCLAVAAEQAGKVVAIIDLDPQATASFWKDVRQLDTPAVASIQPIRLPAMLKACADAGTDLVIIDGAAVARDVAYEAARHADFVLIPTKTAVFDTMSMTHTLDVVRQLDKAFAVVLTFVPPQGQETGDAIKAVTELGATVCPVTVGNRKAFFRAQAAGQAVQEFEVHGPAANEIKRLYEYTDIQLYKNREVV
SIO_010081: B0W47_RS17135
subclass of: SO_0000673
so part of: B0W47_RS17135
location: complement(16899..17534)
location: region:16899-17534:-1
so has part: feature:16899-17534:-1:exon

WP_078528629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16899-17534:-1:exon

B0W47_RS17140
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17140
old locus tag: B0W47_17465
so part of: sequence
location: complement(17577..18194)
location: region:17577-18194:-1
so has part: feature:17577-18194:-1:exon
subclass of: SO_0000010

position:17577:-1
position: 17577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18194:-1
position: 18194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17577-18194:-1:exon

B0W47_RS17140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17140
old locus tag: B0W47_17465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006559417.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MGQRAVIYCRVSTADQSCARQKDELKRFAERAGYEVLDVFMETGSGVRVDRAERRKVMALAQAREIDAILVTELSRWGRSTIDLISTLQELESYRVSLIAITGMTFDLATPHGRMLATVLAGIAEFERDLISERVKSGLAAARARGKVLGRQKGERPKSDRLAPKVLALVGEKRSYRWIARDLGISKNTVAAIVQRDKVRSSLPS
SIO_010081: B0W47_RS17140
subclass of: SO_0000673
so part of: B0W47_RS17140
location: complement(17577..18194)
location: region:17577-18194:-1
so has part: feature:17577-18194:-1:exon

WP_078528632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17577-18194:-1:exon

B0W47_RS17145
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17145
old locus tag: B0W47_17470
pseudo: true
so part of: sequence
location: complement(18402..>18806)
location: region:18402-18806:-1
so has part: feature:18402-18806:-1:exon
subclass of: SO_0000010

position:18402:-1
position: 18402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18806:-1
position: 18806
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18402-18806:-1:exon

B0W47_RS17145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17145
old locus tag: B0W47_17470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012813138.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cation:proton antiporter
SIO_010081: B0W47_RS17145
subclass of: SO_0000673
so part of: B0W47_RS17145
location: complement(18402..>18806)
location: region:18402-18806:-1
so has part: feature:18402-18806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18402-18806:-1:exon

B0W47_RS17150
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17150
old locus tag: B0W47_17475
so part of: sequence
location: 18846..19334
location: region:18846-19334:1
so has part: feature:18846-19334:1:exon
subclass of: SO_0000010

position:18846:1
position: 18846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19334:1
position: 19334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18846-19334:1:exon

B0W47_RS17150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17150
old locus tag: B0W47_17475
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSDLRDRDAVLPASVAGSTAERLQRSGRETGERDRLADASRIEIVSDRRRWHAPEFRARVVIASYESRRPIREVAAQYGIHPSLVFRWRREARAKAQAKGGTSFIPVMVAPAPEPPPLERRREQGTLSGQAVSLVFPDGVRLEFDTGLSADRLREIVGALRS
SIO_010081: B0W47_RS17150
subclass of: SO_0000673
so part of: B0W47_RS17150
location: 18846..19334
location: region:18846-19334:1
so has part: feature:18846-19334:1:exon

WP_052280042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18846-19334:1:exon

B0W47_RS17155
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
gene: tnpB
locus tag: B0W47_RS17155
old locus tag: B0W47_17480
so part of: sequence
location: 19331..19678
location: region:19331-19678:1
so has part: feature:19331-19678:1:exon
subclass of: SO_0000010

position:19331:1
position: 19331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19678:1
position: 19678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19331-19678:1:exon

B0W47_RS17155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
gene: tnpB
locus tag: B0W47_RS17155
old locus tag: B0W47_17480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIPLPSTLRIWLAAGVTDMRLGMPGLALKVQEALGRDPFAGDVYAFRGRRGDLVKLIWHDGIGLSLYAKRIERGHFLWPSAKDGAIHLSPSQLTCLLEGVDWRNPQKTWRPELAG
SIO_010081: B0W47_RS17155
subclass of: SO_0000673
so part of: B0W47_RS17155
location: 19331..19678
location: region:19331-19678:1
so has part: feature:19331-19678:1:exon

WP_019092242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19331-19678:1:exon

B0W47_RS17160
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17160
old locus tag: B0W47_17485
so part of: sequence
location: 19744..21312
location: region:19744-21312:1
so has part: feature:19744-21312:1:exon
subclass of: SO_0000010

position:19744:1
position: 19744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21312:1
position: 21312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19744-21312:1:exon

B0W47_RS17160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17160
old locus tag: B0W47_17485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396037.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MTGDTDDIIALRAALAAAEARAEVAEARAASAEAQVAHLKHLIARMRQDRFGASSERGRRLLAQLELELEELETTLAEDAPENAVNPAVRATAPRSNRGRQPLRADLPRERVVIPAPTQCPCCGSDRLSKLGESVTETLEVIPRQFKVIQTVREKFTCRDCESITQPPAPFHPIARGRAGPWLLSTILCDKFLQHLPLNRQSDAFAREGIDLDTSTLADWVGACTATLAPLTTLIRAHVLAAQRLHADDTTVPVLAKGRTVTGRLWNYVRDDGPFGGPAPPAVWFRYSRDRKGEHPTDHLTGWTGILQSDAYAGYNTLAKPGRQPAPVVSAGCWAHGRRGLFKIAERDKAPLAIEAVGRIDAIFQAERTINGTPPEHRLAVRQTDIAPLVDDLFDWMRECCRRMSTKNPVAHAMNYFLRRADTFTRFLTDGRICLSNNAAERALRGIALGRKAWLFAGSDRGGERAAAMYSLIVTARLNDVDPHAWLADVLARINDIPNPRLHELLPWHWKAHQQVHNTIAA
SIO_010081: B0W47_RS17160
subclass of: SO_0000673
so part of: B0W47_RS17160
location: 19744..21312
location: region:19744-21312:1
so has part: feature:19744-21312:1:exon

WP_078524623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19744-21312:1:exon

B0W47_RS17165
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17165
old locus tag: B0W47_17490
so part of: sequence
location: complement(21224..22228)
location: region:21224-22228:-1
so has part: feature:21224-22228:-1:exon
subclass of: SO_0000010

position:21224:-1
position: 21224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22228:-1
position: 22228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21224-22228:-1:exon

B0W47_RS17165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17165
old locus tag: B0W47_17490
inference: COORDINATES: protein motif:HMM:NF013188.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:proton antiporter
translation: MDTISLLALLLTLSAGFSILNHHTFRLPVTIGVLVFSLLASLLVMILNPLIPAYDLQALPRSVLGAINLPTALLNGALSLLLFAGSTQVDVRHLRAKLASVTALSVLGTVLAVAFLAIAAWYVFPLLGHAIPFTWCIVLGAILAPTDPVSVVGMLKRLGLPAPLQAVFAGESLFNDGVGVVIFGVTIGLATGDSQGVTASEIALSFCREAIGGGLLGALTGWIALRVLKGQRDPHIDLLTSLALATGTFSIANQLGMSGAIAVVVAGLCFGTSYSHSVFDEASRKELDIAWTLIDGNHPARDAGVFRRRWYCGPAGGLSSARAGVHGGVDWECH
SIO_010081: B0W47_RS17165
subclass of: SO_0000673
so part of: B0W47_RS17165
location: complement(21224..22228)
location: region:21224-22228:-1
so has part: feature:21224-22228:-1:exon

WP_078528635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21224-22228:-1:exon

B0W47_RS19190
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS19190
old locus tag: B0W47_17495
pseudo: true
so part of: sequence
location: complement(<22647..22907)
location: region:22647-22907:-1
so has part: feature:22647-22907:-1:exon
subclass of: SO_0000010

position:22647:-1
position: 22647
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:22907:-1
position: 22907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22647-22907:-1:exon

B0W47_RS19190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS19190
old locus tag: B0W47_17495
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: B0W47_RS19190
subclass of: SO_0000673
so part of: B0W47_RS19190
location: complement(<22647..22907)
location: region:22647-22907:-1
so has part: feature:22647-22907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22647-22907:-1:exon

B0W47_RS17175
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17175
old locus tag: B0W47_17500
so part of: sequence
location: 23279..24550
location: region:23279-24550:1
so has part: feature:23279-24550:1:exon
subclass of: SO_0000010

position:23279:1
position: 23279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24550:1
position: 24550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23279-24550:1:exon

B0W47_RS17175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17175
old locus tag: B0W47_17500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019087017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chloride channel protein
translation: MYCTGAVLIGIISVIFAHLGDWAAELRYHIVTRNPWSMLVIAPLGLVAISWLTRLLFNGAQGSGIPQTIATLHMHNFVLVDRILTLRIALGKILMTCLGLICGASIGREGPSVQIGASIMHAFSRAMGQHNNVTRHGMILAGGAAGMAAAFNTPLAGVVFAIEELAHSFEQKASGRTLTVIIFSGITAIALLGNYTYFGRTNVFIPVGRAWLAVLVCGVSGGLAGGIFARLVIRLSKGLPAFLGRFSRRFPLVFIALCGLLLALIGLASDGATYGTGYLQARGIVDGSLHYPASFFLLKYISMLITFCSGIPGGMFAPSLAIGAGMGGWVEQFLPHTSPGGVVLLGMAAYFCGVAQSPLTATIIVMEICDNQQVTLALLATAFLAFGVSRMVCPRPLYSALANGFLEKTERMARQASHDKLEK
SIO_010081: B0W47_RS17175
subclass of: SO_0000673
so part of: B0W47_RS17175
location: 23279..24550
location: region:23279-24550:1
so has part: feature:23279-24550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23279-24550:1:exon

B0W47_RS17185
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17185
old locus tag: B0W47_17510
so part of: sequence
location: 25247..25516
location: region:25247-25516:1
so has part: feature:25247-25516:1:exon
subclass of: SO_0000010

position:25247:1
position: 25247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25516:1
position: 25516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25247-25516:1:exon

B0W47_RS17185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17185
old locus tag: B0W47_17510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVTQNKPTHEIMDTDAMMVAFLREYGLSGARERARHHIGRCVEAGLEDDAAFWMRVSNQLENLASSDYGPGNLFTPSGQISPTATRPG
SIO_010081: B0W47_RS17185
subclass of: SO_0000673
so part of: B0W47_RS17185
location: 25247..25516
location: region:25247-25516:1
so has part: feature:25247-25516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25247-25516:1:exon

B0W47_RS17190
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17190
old locus tag: B0W47_17515
so part of: sequence
location: 25528..25923
location: region:25528-25923:1
so has part: feature:25528-25923:1:exon
subclass of: SO_0000010

position:25528:1
position: 25528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25923:1
position: 25923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25528-25923:1:exon

B0W47_RS17190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17190
old locus tag: B0W47_17515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010511654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rrf2 family transcriptional regulator
translation: MRTDYAFRVLIHLARHGHTQNRMTVRHIAERHNISHNHLVKVVNDLCHHGLLVGTRGRNGGVSLARSPKDINVGHVIRLMETEGEVMTGCAPLQGRPCILADACRLRHLTRQATDAFMAILDGMSVHDLLS
SIO_010081: B0W47_RS17190
subclass of: SO_0000673
so part of: B0W47_RS17190
location: 25528..25923
location: region:25528-25923:1
so has part: feature:25528-25923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25528-25923:1:exon

B0W47_RS17195
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17195
old locus tag: B0W47_17520
pseudo: true
so part of: sequence
location: complement(25932..26599)
location: region:25932-26599:-1
so has part: feature:25932-26599:-1:exon
subclass of: SO_0000010

position:25932:-1
position: 25932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26599:-1
position: 26599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25932-26599:-1:exon

B0W47_RS17195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17195
old locus tag: B0W47_17520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512507.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF6118 family protein
SIO_010081: B0W47_RS17195
subclass of: SO_0000673
so part of: B0W47_RS17195
location: complement(25932..26599)
location: region:25932-26599:-1
so has part: feature:25932-26599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25932-26599:-1:exon

B0W47_RS18210
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS18210
so part of: sequence
location: complement(26625..26780)
location: region:26625-26780:-1
so has part: feature:26625-26780:-1:exon
subclass of: SO_0000010

position:26625:-1
position: 26625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26780:-1
position: 26780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26625-26780:-1:exon

B0W47_RS18210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS18210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAMMAFQSEVERYFSERAARTTPAHAKALLERIGTKGQIRDDDRLDVPEN
SIO_010081: B0W47_RS18210
subclass of: SO_0000673
so part of: B0W47_RS18210
location: complement(26625..26780)
location: region:26625-26780:-1
so has part: feature:26625-26780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26625-26780:-1:exon

B0W47_RS17200
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17200
old locus tag: B0W47_17525
so part of: sequence
location: complement(26799..27122)
location: region:26799-27122:-1
so has part: feature:26799-27122:-1:exon
subclass of: SO_0000010

position:26799:-1
position: 26799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27122:-1
position: 27122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26799-27122:-1:exon

B0W47_RS17200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17200
old locus tag: B0W47_17525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004356768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MPSGKAVPKRKKVRLPLRSDYTKQFEKDFQRLSRSGKYNMARLKVVMLLLIANEDPLGAEWLDHPLKGDWADHQECHVGGDFLLIYQKGEEKIVFVRTGSHADLFEN
SIO_010081: B0W47_RS17200
subclass of: SO_0000673
so part of: B0W47_RS17200
location: complement(26799..27122)
location: region:26799-27122:-1
so has part: feature:26799-27122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26799-27122:-1:exon

B0W47_RS17205
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS17205
old locus tag: B0W47_17530
so part of: sequence
location: complement(27064..27366)
location: region:27064-27366:-1
so has part: feature:27064-27366:-1:exon
subclass of: SO_0000010

position:27064:-1
position: 27064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27366:-1
position: 27366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27064-27366:-1:exon

B0W47_RS17205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS17205
old locus tag: B0W47_17530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017503755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MSGFVRARIDETLKEEASVVLDAIGLTVSDVVRMLLTRIAREKALPVDLVVPNAATIAAMEEGRMLLKDRTRGFENAQEMFDALGESGSKKKKSKTAASI
SIO_010081: B0W47_RS17205
subclass of: SO_0000673
so part of: B0W47_RS17205
location: complement(27064..27366)
location: region:27064-27366:-1
so has part: feature:27064-27366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27064-27366:-1:exon

B0W47_RS17210
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
gene: traA
locus tag: B0W47_RS17210
old locus tag: B0W47_17535
pseudo: true
so part of: sequence
location: complement(27452..30132)
location: region:27452-30132:-1
so has part: feature:27452-30132:-1:exon
subclass of: SO_0000010

position:27452:-1
position: 27452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30132:-1
position: 30132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27452-30132:-1:exon

B0W47_RS17210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
gene: traA
locus tag: B0W47_RS17210
old locus tag: B0W47_17535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092373.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
SIO_010081: B0W47_RS17210
subclass of: SO_0000673
so part of: B0W47_RS17210
location: complement(27452..30132)
location: region:27452-30132:-1
so has part: feature:27452-30132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27452-30132:-1:exon

B0W47_RS19035
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS19035
so part of: sequence
location: complement(30147..30545)
location: region:30147-30545:-1
so has part: feature:30147-30545:-1:exon
subclass of: SO_0000010

position:30147:-1
position: 30147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30545:-1
position: 30545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30147-30545:-1:exon

B0W47_RS19035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS19035
inference: COORDINATES: protein motif:HMM:NF015354.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MTQAQGIALARDFVREQFVERGMVADLNVHWDIGEDGQAKPHAHVMLSTRRIEVKTGEAVHGRRDGIPHPERGGRGAYNLAPDPGPDGAERDDDPLKLMIRLLTEIRETQRGILLKLSTLEKRLQRLEEQRD
SIO_010081: B0W47_RS19035
subclass of: SO_0000673
so part of: B0W47_RS19035
location: complement(30147..30545)
location: region:30147-30545:-1
so has part: feature:30147-30545:-1:exon

WP_236944720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30147-30545:-1:exon