Komagataeibacter nataicola strain RZS01 plasmid pKNA02, complete sequence.
type: Entry
definition: Komagataeibacter nataicola strain RZS01 plasmid pKNA02, complete sequence.
sequence version: NZ_CP019877.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP019877.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN06368327
keyword: RefSeq
source: Komagataeibacter nataicola
organism: Komagataeibacter nataicola
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP019877.1.\nBacteria available from Chemicobiology and Functional Materials\nInstitute of Nanjing University of Science and Technology (No.200,\nXiaolingwei Road, Nanjing, China).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Coverage :: 76X\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 04:44:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,601\nCDSs (total) :: 3,523\nGenes (coding) :: 3,405\nCDSs (with protein) :: 3,405\nGenes (RNA) :: 78\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 59\nncRNAs :: 4\nPseudo Genes (total) :: 118\nCDSs (without protein) :: 118\nPseudo Genes (ambiguous residues) :: 0 of 118\nPseudo Genes (frameshifted) :: 57 of 118\nPseudo Genes (incomplete) :: 81 of 118\nPseudo Genes (internal stop) :: 21 of 118\nPseudo Genes (multiple problems) :: 36 of 118\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 38682
topology: circular
so has quality: SO_0000988
location: 1..38682
location: region:1-38682:1
RO_0002162: 265960

NZ_CP019877
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN06368327
type: BioSample
SIO_000068: biosample

1
title: zhang
author: Zhang, H.
journal: Unpublished

2
title: Direct Submission
author: Zhang, H.
journal: Submitted (15-FEB-2017) Chemicobiolgy and Functional Materials Institute, Nanjing University of Science and Technology, No. 200, Xiaolingwei Road, Nanjing, Jiangsu 210094, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38682:1
position: 38682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-38682:1:source
so part of: sequence
organism: Komagataeibacter nataicola
mol type: genomic DNA
strain: RZS01
plasmid: pKNA02
collection date: 2008-05-11

265960
type: Taxonomy
SIO_000068: taxonomy

B0W47_RS16580
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16580
old locus tag: B0W47_16865
so part of: sequence
location: complement(202..618)
location: region:202-618:-1
so has part: feature:202-618:-1:exon
subclass of: SO_0000010

position:202:-1
position: 202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618:-1
position: 618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202-618:-1:exon

B0W47_RS16580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16580
old locus tag: B0W47_16865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MRYPVVIERGSETTAFGVVFPDLPGCFSAGDTLDEAISNAEEAAAAWIDATLDAGEAVPFPSTLDAIQNNPDYEGWTVGFVTIDPAVLDDRVERANISLPRRVLERLDALARSSHESRSGMIAAMTLQARLTPVVRSK
SIO_010081: B0W47_RS16580
subclass of: SO_0000673
so part of: B0W47_RS16580
location: complement(202..618)
location: region:202-618:-1
so has part: feature:202-618:-1:exon

WP_078528456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202-618:-1:exon

B0W47_RS16585
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16585
old locus tag: B0W47_16870
so part of: sequence
location: complement(629..808)
location: region:629-808:-1
so has part: feature:629-808:-1:exon
subclass of: SO_0000010

position:629:-1
position: 629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808:-1
position: 808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629-808:-1:exon

B0W47_RS16585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16585
old locus tag: B0W47_16870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019087453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MKSANLIRELEKAGWKLDRVRGSHNVFKHPSRPGIVVVPHPKKDLGTGLVAAIRKQAGL
SIO_010081: B0W47_RS16585
subclass of: SO_0000673
so part of: B0W47_RS16585
location: complement(629..808)
location: region:629-808:-1
so has part: feature:629-808:-1:exon

WP_078528458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:629-808:-1:exon

B0W47_RS18990
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS18990
old locus tag: B0W47_16875
so part of: sequence
location: 1570..2157
location: region:1570-2157:1
so has part: feature:1570-2157:1:exon
subclass of: SO_0000010

position:1570:1
position: 1570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2157:1
position: 2157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1570-2157:1:exon

B0W47_RS18990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS18990
old locus tag: B0W47_16875
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MSDNQELDIILLRSFLAVSETLHFTSAAQMRGVTQSTISQHINRLEQAVGASLLHRTTKQVELTPQGMQMVSFAQNIIHAQEMAMDYFRSGTLRAELRLGIAEDMVVSRFPEMLKRFRRLYPHVEVRLTVGLSRELYNLLDAGALDLICTKRKEGDERGIPLWRERLQWLGGGNFDTLAEGAVPLVCSRQQHYPG
SIO_010081: B0W47_RS18990
subclass of: SO_0000673
so part of: B0W47_RS18990
location: 1570..2157
location: region:1570-2157:1
so has part: feature:1570-2157:1:exon

WP_236944711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1570-2157:1:exon

B0W47_RS18995
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS18995
old locus tag: B0W47_16880
so part of: sequence
location: 2208..2486
location: region:2208-2486:1
so has part: feature:2208-2486:1:exon
subclass of: SO_0000010

position:2208:1
position: 2208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486:1
position: 2486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2208-2486:1:exon

B0W47_RS18995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS18995
old locus tag: B0W47_16880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSNLGALVAAVRSGYGVFAQSGLLVSQEIVPVPASAGLPPLPDVDFVMVGATEQLEGATRDLADLVIENIEGLAPPEAASVPAHPLRARCA
SIO_010081: B0W47_RS18995
subclass of: SO_0000673
so part of: B0W47_RS18995
location: 2208..2486
location: region:2208-2486:1
so has part: feature:2208-2486:1:exon

WP_236944712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2208-2486:1:exon

B0W47_RS19000
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS19000
so part of: sequence
location: 2558..3037
location: region:2558-3037:1
so has part: feature:2558-3037:1:exon
subclass of: SO_0000010

position:2558:1
position: 2558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3037:1
position: 3037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2558-3037:1:exon

B0W47_RS19000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS19000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: Plug domain-containing protein
translation: MVPCLSAPWRRQLFLHASFVMLVSPVISQAATLTTPTKVTHRDRVPPAATPAHTTAHAPAHQTPAAPESIKVSSQKMHFMRQQHVADSATHIDHQELVNRNVRQMTDIVRVAPNLTIQPSFGSAGLNFALRGVGLMDFTQNNTPSVMPYVDGVAIPSAS
SIO_010081: B0W47_RS19000
subclass of: SO_0000673
so part of: B0W47_RS19000
location: 2558..3037
location: region:2558-3037:1
so has part: feature:2558-3037:1:exon

WP_236944713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2558-3037:1:exon

B0W47_RS19005
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS19005
so part of: sequence
location: 3046..3273
location: region:3046-3273:1
so has part: feature:3046-3273:1:exon
subclass of: SO_0000010

position:3046:1
position: 3046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3273:1
position: 3273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3046-3273:1:exon

B0W47_RS19005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS19005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLFDMDSISVNPGPGGYTHGQMTTGGEINFHTADPTEQFHAGITEDIASYDRNRVTGFISGPLHAPFCSVSRGSP
SIO_010081: B0W47_RS19005
subclass of: SO_0000673
so part of: B0W47_RS19005
location: 3046..3273
location: region:3046-3273:1
so has part: feature:3046-3273:1:exon

WP_236944714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3046-3273:1:exon

B0W47_RS19010
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS19010
so part of: sequence
location: 3270..4484
location: region:3270-4484:1
so has part: feature:3270-4484:1:exon
subclass of: SO_0000010

position:3270:1
position: 3270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4484:1
position: 4484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3270-4484:1:exon

B0W47_RS19010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS19010
inference: COORDINATES: protein motif:HMM:NF012801.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MTGGGYQHSASGQRFGNADLGALRAKLRWNIDDTTHLDIGGHWTTDQSEAASGHNLYNGYGVPINSDLMQTSWGLDPRFAKIIGIDGRNTKPREDNMFWGANIRFTKDFTWGRLTTLSAYESIDEHELSNQTDSVLSYGNMFRNNQSNVFSQEVKLESINPAARFHWTAGMYYSRTEQAQNFWYDSSDRPGTTPLNKTSYTEGMQTFNQYVELSYRVLPKLRLIGSITHESDDRHIRNVTSTNYNLNTGAIEGTPTNFGDAGALANEFSGHVGLQYQFRPNIMGYAMFSRGFKPGGFSANITELASQLKPFKPEQVITYEGGFKTTFFKNKLRFNGAGFYYDYRDQQVVSTVLVPPFGALSGYVNAPRSYIYGAEFDLEAHPIHGLSLTQNFGYQHGVYSQFQS
SIO_010081: B0W47_RS19010
subclass of: SO_0000673
so part of: B0W47_RS19010
location: 3270..4484
location: region:3270-4484:1
so has part: feature:3270-4484:1:exon

WP_250637990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3270-4484:1:exon

B0W47_RS19075
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS19075
so part of: sequence
location: 4535..4900
location: region:4535-4900:1
so has part: feature:4535-4900:1:exon
subclass of: SO_0000010

position:4535:1
position: 4535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4900:1
position: 4900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4535-4900:1:exon

B0W47_RS19075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS19075
inference: COORDINATES: protein motif:HMM:NF012801.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MNTNYDNYSMGLANLTLSGAATYSWHVLRDYQMTFDVDYSYRGAQTQPQHIGDSGIYRAPAYFLVNSFLTFASPKQHWSATVYAQNLADRRYWLSGGTQATFYGVIPGLPRFVGARLNYTY
SIO_010081: B0W47_RS19075
subclass of: SO_0000673
so part of: B0W47_RS19075
location: 4535..4900
location: region:4535-4900:1
so has part: feature:4535-4900:1:exon

WP_250637991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4535-4900:1:exon

B0W47_RS16605
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16605
old locus tag: B0W47_16890
so part of: sequence
location: 5004..6242
location: region:5004-6242:1
so has part: feature:5004-6242:1:exon
subclass of: SO_0000010

position:5004:1
position: 5004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6242:1
position: 6242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5004-6242:1:exon

B0W47_RS16605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16605
old locus tag: B0W47_16890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014106245.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015293 - symporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:dicarboxylase symporter family transporter
translation: MFMQVVIASVLGLGLGLIDPALAMQTRWTTDIFLRLIVMAVGPLLFCIVVMGIVGAGSLRTVGRMGIKALVYFEVMTTFALVMAVGIGMLVQPGRAIVFTPTVEDAQMVASYAQNAHLLHEGGITAFILSLIPHSPTDAFAQANVLQILFFAILFGCCLSLIGEAGAPLVRLVDALAVLFARMMRLIIALAPLGVFGAMATTTAHYGMNAIMHLAAFVGLYFVVIALFIIIALGGCLRLSGVNPWCFLRYFREELAITFTTTTSDAVLPSVMEKLRRMGVDPQVVGLVVPAGYSFNLDALSIYLGLAVVFLAQATGTHLSTWQMVIMLTTALFTSKGAHGVPGIAIVVLAATLAAIPSIPVASLVMLLAVDWFIGIARAVGNLAGNCVAPIVIGAWEGRLDREKMARVLAQD
SIO_010081: B0W47_RS16605
subclass of: SO_0000673
so part of: B0W47_RS16605
location: 5004..6242
location: region:5004-6242:1
so has part: feature:5004-6242:1:exon

WP_205836734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5004-6242:1:exon

B0W47_RS16610
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16610
old locus tag: B0W47_16895
so part of: sequence
location: 6276..7307
location: region:6276-7307:1
so has part: feature:6276-7307:1:exon
subclass of: SO_0000010

position:6276:1
position: 6276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7307:1
position: 7307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6276-7307:1:exon

B0W47_RS16610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16610
old locus tag: B0W47_16895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014106246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ldh family oxidoreductase
translation: MSEIFHASADILETRTRNALLEAGASTETAEATTQALLYASRIGVDSHGVRLVTHYAAMLRAGRLNGTPALKVHRTAPATALLDADDGLGHYACYHAMQLAIEMAAQTGIGAVGVMRSSHCGAAGAYALKAPEAGMVGIMTSNSDANVTPFRGTHAFHGTNPIAMAAPVEGQMPWLLDMATSSIPFNRVRLYRSLGLPLPAGVAADAEGNMTQDAMQASMLLPLGGESYGFKGAGLAGMVSILSAVLTGAMIDPRMIQMTDTSDFTTPRNVGHFCIVLDPARFVGREGFDRALKDYLAMLRAILSTTAGESVMAPGDREWKTMEERKRTGIPVDPDTRGFLKL
SIO_010081: B0W47_RS16610
subclass of: SO_0000673
so part of: B0W47_RS16610
location: 6276..7307
location: region:6276-7307:1
so has part: feature:6276-7307:1:exon

WP_078528463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6276-7307:1:exon

B0W47_RS16615
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16615
pseudo: true
so part of: sequence
location: complement(7443..>8067)
location: region:7443-8067:-1
so has part: feature:7443-8067:-1:exon
subclass of: SO_0000010

position:7443:-1
position: 7443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8067:-1
position: 8067
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7443-8067:-1:exon

B0W47_RS16615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015073739.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: B0W47_RS16615
subclass of: SO_0000673
so part of: B0W47_RS16615
location: complement(7443..>8067)
location: region:7443-8067:-1
so has part: feature:7443-8067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7443-8067:-1:exon

B0W47_RS18580
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS18580
pseudo: true
so part of: sequence
location: complement(<8069..8239)
location: region:8069-8239:-1
so has part: feature:8069-8239:-1:exon
subclass of: SO_0000010

position:8069:-1
position: 8069
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:8239:-1
position: 8239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8069-8239:-1:exon

B0W47_RS18580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS18580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015821555.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: B0W47_RS18580
subclass of: SO_0000673
so part of: B0W47_RS18580
location: complement(<8069..8239)
location: region:8069-8239:-1
so has part: feature:8069-8239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8069-8239:-1:exon

B0W47_RS16620
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16620
old locus tag: B0W47_16910
so part of: sequence
location: 8501..8914
location: region:8501-8914:1
so has part: feature:8501-8914:1:exon
subclass of: SO_0000010

position:8501:1
position: 8501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8914:1
position: 8914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8501-8914:1:exon

B0W47_RS16620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16620
old locus tag: B0W47_16910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011982806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTRVGYARISTTDQNLDIQIAHLKAGGCEIIRSETGSGGSRNGRTELETIMQFLRSGDELVVLRLDRLGRSTRDVLNLVHELEEKGASLRVLEPDVTTAGAMGRMVITILGMVADMELKFIKDRQRAGIEAAKAQRT
SIO_010081: B0W47_RS16620
subclass of: SO_0000673
so part of: B0W47_RS16620
location: 8501..8914
location: region:8501-8914:1
so has part: feature:8501-8914:1:exon

WP_078528466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8501-8914:1:exon

B0W47_RS16625
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16625
so part of: sequence
location: complement(8924..9681)
location: region:8924-9681:-1
so has part: feature:8924-9681:-1:exon
subclass of: SO_0000010

position:8924:-1
position: 8924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9681:-1
position: 9681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8924-9681:-1:exon

B0W47_RS16625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611976.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MSDLFWLTDEQMERLRPFFPKSHGKPRVDDRRVLNGIIFVNRNGMRWRDAPREYGPHKTLYNRWKRWGDMGIFMRMMDGLSAAKAEPQTIMIDATYLKAHRTASSLRFKKGDPGRLIGRTKGGMNTKLHAITDQNGRPLSFFMTAGQISDYTGASALLSSLPMAQWLLADRGYDADWFRDALEEKGIRPCIPGRRSRGKPVKYDKRKYKRRNRIEIMFGRLKDWRRVATRYDRCPNVFFSAICLAATVIFWL
SIO_010081: B0W47_RS16625
subclass of: SO_0000673
so part of: B0W47_RS16625
location: complement(join(8924..9360,9360..9681))
location: region:8924-9681:-1
so has part: feature:9360-9681:-1:exon
so has part: feature:8924-9360:-1:exon

WP_151892027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9360-9681:-1:exon

position:9360:-1
position: 9360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8924-9360:-1:exon

B0W47_RS16630
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16630
old locus tag: B0W47_16925
so part of: sequence
location: 9791..9880
location: region:9791-9880:1
so has part: feature:9791-9880:1:exon
subclass of: SO_0000010

position:9791:1
position: 9791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9880:1
position: 9880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9791-9880:1:exon

B0W47_RS16630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16630
old locus tag: B0W47_16925
inference: COORDINATES: protein motif:HMM:NF014814.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MAAGESKAGVARELKISRMTVYRALETID
SIO_010081: B0W47_RS16630
subclass of: SO_0000673
so part of: B0W47_RS16630
location: 9791..9880
location: region:9791-9880:1
so has part: feature:9791-9880:1:exon

WP_236944715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9791-9880:1:exon

B0W47_RS16635
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16635
old locus tag: B0W47_16930
so part of: sequence
location: complement(10101..10382)
location: region:10101-10382:-1
so has part: feature:10101-10382:-1:exon
subclass of: SO_0000010

position:10101:-1
position: 10101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10382:-1
position: 10382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10101-10382:-1:exon

B0W47_RS16635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16635
old locus tag: B0W47_16930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017276173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MKYEWTAKAVSDLQTLAANFDHPSGAARVMRRLTAAPDVLIQFPRMGTLLPVFSPREVRRFIVDDYEIRYEVTADALFITDVFHTRQDRETFH
SIO_010081: B0W47_RS16635
subclass of: SO_0000673
so part of: B0W47_RS16635
location: complement(10101..10382)
location: region:10101-10382:-1
so has part: feature:10101-10382:-1:exon

WP_078528469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10101-10382:-1:exon

B0W47_RS16640
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16640
old locus tag: B0W47_16935
so part of: sequence
location: complement(10379..10666)
location: region:10379-10666:-1
so has part: feature:10379-10666:-1:exon
subclass of: SO_0000010

position:10379:-1
position: 10379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10666:-1
position: 10666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10379-10666:-1:exon

B0W47_RS16640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16640
old locus tag: B0W47_16935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003631008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MSEKLSAGKQVVSVQMPADLVDAMDRYGEAIERPRSWVMREAVASYLAYEAEKDRVTRRALADVDAGRTISAEAVKAWADSLDQANPLPLPEPKR
SIO_010081: B0W47_RS16640
subclass of: SO_0000673
so part of: B0W47_RS16640
location: complement(10379..10666)
location: region:10379-10666:-1
so has part: feature:10379-10666:-1:exon

WP_078528472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10379-10666:-1:exon

B0W47_RS16645
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16645
old locus tag: B0W47_16940
so part of: sequence
location: complement(11485..12390)
location: region:11485-12390:-1
so has part: feature:11485-12390:-1:exon
subclass of: SO_0000010

position:11485:-1
position: 11485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12390:-1
position: 12390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11485-12390:-1:exon

B0W47_RS16645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16645
old locus tag: B0W47_16940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007284615.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MSKRKLPSEQSELVLSPTTARVIQLSAEIQATPPDEIEFMHTVLCQVGLPRKRTKETRFERNNGKASLLITAGEMFNDGHWEKLFVPYGTKPRLALFHISTEAIRTKSRIVAVGRTISEFMKRLNISQNGPSREAFRAQMNALCACEMKLGYGSRNLNARPVDEFDAWTKNLAKDSTIELSEKFWHELKENAVPLDPRALEGLQHSALALDIYTWLAHRLHRVRRPGEKLTWANLRLQFGQEYTDDKNFKKAFLIALRQVAAVYPDARLEQVRTGLRLIASPPPVPRQTIISYQKTIGSDT
SIO_010081: B0W47_RS16645
subclass of: SO_0000673
so part of: B0W47_RS16645
location: complement(11485..12390)
location: region:11485-12390:-1
so has part: feature:11485-12390:-1:exon

WP_078528475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11485-12390:-1:exon

B0W47_RS16650
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16650
old locus tag: B0W47_16945
so part of: sequence
location: complement(12592..12846)
location: region:12592-12846:-1
so has part: feature:12592-12846:-1:exon
subclass of: SO_0000010

position:12592:-1
position: 12592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12846:-1
position: 12846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12592-12846:-1:exon

B0W47_RS16650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16650
old locus tag: B0W47_16945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004167347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family transcriptional regulator
translation: MAIHRKAKPTSVESAADAFVTGAPDAGKTQPLSYDKGLPKGHKRQISLTIAPDLLRRVDERAEAMGTGRAAFISMAIFKALEES
SIO_010081: B0W47_RS16650
subclass of: SO_0000673
so part of: B0W47_RS16650
location: complement(12592..12846)
location: region:12592-12846:-1
so has part: feature:12592-12846:-1:exon

WP_078528478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12592-12846:-1:exon

B0W47_RS16655
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16655
old locus tag: B0W47_16950
so part of: sequence
location: complement(12876..13526)
location: region:12876-13526:-1
so has part: feature:12876-13526:-1:exon
subclass of: SO_0000010

position:12876:-1
position: 12876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13526:-1
position: 13526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12876-13526:-1:exon

B0W47_RS16655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16655
old locus tag: B0W47_16950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIIAIGNTKGGVGKTTLAVQLAIIRATAGREVWLIDGDRQGTAAAAIAARSEAGKLPGIACAQYPDGPNLRAQVQQQRDKWDDIIIDVGGRDSTALRAALILADTLLVPFAPRSYDVWALDDMAVLIDEARSVRDGLRAVAVMNQADPGDHSTDNAEAAAAVKEVPQFIYLPIPIRRRKAFSNAGGAGLAVSELTPRDPKAVAEISALASAVFNPI
SIO_010081: B0W47_RS16655
subclass of: SO_0000673
so part of: B0W47_RS16655
location: complement(12876..13526)
location: region:12876-13526:-1
so has part: feature:12876-13526:-1:exon

WP_078528481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12876-13526:-1:exon

B0W47_RS16660
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16660
old locus tag: B0W47_16955
so part of: sequence
location: complement(13665..14300)
location: region:13665-14300:-1
so has part: feature:13665-14300:-1:exon
subclass of: SO_0000010

position:13665:-1
position: 13665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14300:-1
position: 14300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13665-14300:-1:exon

B0W47_RS16660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16660
old locus tag: B0W47_16955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092484.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSGTRKPGQRATPAGAPGGMQLFDRDGSRKYLTVAERARFLRAAEPAPREARTLCMTLAWSGCRLSEALALTADRVDLAGGVLVFATLKKRQDGIYRAVPVPPSLLEALDLVHGIREAQRRRGRGSAARLWPWSRMTGWRAVHAVMVAAGLSGPAASPKGLRHAFGVAAVSSGIPLNMVQKWLGHAQLSTTAIYADAVGAEEQDIARKMWG
SIO_010081: B0W47_RS16660
subclass of: SO_0000673
so part of: B0W47_RS16660
location: complement(13665..14300)
location: region:13665-14300:-1
so has part: feature:13665-14300:-1:exon

WP_078528484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13665-14300:-1:exon

B0W47_RS16665
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16665
old locus tag: B0W47_16960
so part of: sequence
location: complement(14297..14593)
location: region:14297-14593:-1
so has part: feature:14297-14593:-1:exon
subclass of: SO_0000010

position:14297:-1
position: 14297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14593:-1
position: 14593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14297-14593:-1:exon

B0W47_RS16665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16665
old locus tag: B0W47_16960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092577.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MPRPAPKAPVRPPRQLSLFPETAALVRVDPAINCWRFYHLSLQPDLFGGTALVRQWGRIGTAGRQVCERHHDAGSARDALARQLRAKRRRGYRDRTAG
SIO_010081: B0W47_RS16665
subclass of: SO_0000673
so part of: B0W47_RS16665
location: complement(14297..14593)
location: region:14297-14593:-1
so has part: feature:14297-14593:-1:exon

WP_078528487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14297-14593:-1:exon

B0W47_RS16670
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16670
old locus tag: B0W47_16965
pseudo: true
so part of: sequence
location: 14904..>15410
location: region:14904-15410:1
so has part: feature:14904-15410:1:exon
subclass of: SO_0000010

position:14904:1
position: 14904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15410:1
position: 15410
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14904-15410:1:exon

B0W47_RS16670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16670
old locus tag: B0W47_16965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018307960.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage integrase N-terminal SAM-like domain-containing protein
SIO_010081: B0W47_RS16670
subclass of: SO_0000673
so part of: B0W47_RS16670
location: 14904..>15410
location: region:14904-15410:1
so has part: feature:14904-15410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14904-15410:1:exon

B0W47_RS16675
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
gene: dnaE2
locus tag: B0W47_RS16675
old locus tag: B0W47_16970
pseudo: true
so part of: sequence
location: complement(<15420..>15766)
location: region:15420-15766:-1
so has part: feature:15420-15766:-1:exon
subclass of: SO_0000010

position:15420:-1
position: 15420
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:15766:-1
position: 15766
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15420-15766:-1:exon

B0W47_RS16675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
gene: dnaE2
locus tag: B0W47_RS16675
old locus tag: B0W47_16970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015072467.1
note: DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: error-prone DNA polymerase
SIO_010081: B0W47_RS16675
subclass of: SO_0000673
so part of: B0W47_RS16675
location: complement(<15420..>15766)
location: region:15420-15766:-1
so has part: feature:15420-15766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15420-15766:-1:exon

B0W47_RS16680
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16680
old locus tag: B0W47_16975
pseudo: true
so part of: sequence
location: complement(<15762..15928)
location: region:15762-15928:-1
so has part: feature:15762-15928:-1:exon
subclass of: SO_0000010

position:15762:-1
position: 15762
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:15928:-1
position: 15928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15762-15928:-1:exon

B0W47_RS16680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16680
old locus tag: B0W47_16975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015075058.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: B0W47_RS16680
subclass of: SO_0000673
so part of: B0W47_RS16680
location: complement(<15762..15928)
location: region:15762-15928:-1
so has part: feature:15762-15928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15762-15928:-1:exon

B0W47_RS16685
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16685
old locus tag: B0W47_16980
so part of: sequence
location: complement(16085..17632)
location: region:16085-17632:-1
so has part: feature:16085-17632:-1:exon
subclass of: SO_0000010

position:16085:-1
position: 16085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17632:-1
position: 17632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16085-17632:-1:exon

B0W47_RS16685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16685
old locus tag: B0W47_16980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006560188.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MNTSEFLDAFERTFKARVPFILIQTTERSRAVELIRDVCARQSVTAYVHTLSKGTMDITTNRVTNEDRSVIGAVDFAAQQMMQRQNLTFVLTELDDVDTDSAFARQLLDTVILASEKGGAIVAVTTKTVWSQVQRLGVSLMLSPPDQDETYINISRQIDDYRGLMPIEWDESDMRRAATILGGVTKIEAENIIAMMAARGSVRKSDFPELMRAKDSVFSDVSGIERVALRSETLNLGGLSGLQKWLQRKRPLLTADLRERVIRPPRGVLLVGVPGCGKSLSAKTIAAQFEIPLYRLDLANLMGMYVGQSEGRLKEALEAADRVAPCVLWIDEIEKGLAAGGSDSSGVTTRMIGQFLFWLQESQARVFVVATANDVSKLPPELLRRGRFDELFFVDLPGSDERREIISLYVERGKLQPLDAGLLEELVELSEGFAGADLEAAVREVVEEAFLNGDAGITPNLYRSSFQNIVPLSRTSPEQIEAIRAWGRERAVPASGQPIGNSATTAPMRRAVLLG
SIO_010081: B0W47_RS16685
subclass of: SO_0000673
so part of: B0W47_RS16685
location: complement(16085..17632)
location: region:16085-17632:-1
so has part: feature:16085-17632:-1:exon

WP_078528490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16085-17632:-1:exon

B0W47_RS16690
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16690
old locus tag: B0W47_16985
so part of: sequence
location: complement(17650..18210)
location: region:17650-18210:-1
so has part: feature:17650-18210:-1:exon
subclass of: SO_0000010

position:17650:-1
position: 17650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18210:-1
position: 18210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17650-18210:-1:exon

B0W47_RS16690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16690
old locus tag: B0W47_16985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGLWRERAAPDGPNAGNAPETYAEWSAWFERFEHGGEDDVLLGLAQRGKVNWTRGMANSFATRAAGTLHARMETIRLMLQRHLEKSTDVNDLGRAMVNARRAFAQLSRYATLSCWPDPLPAQLADMIRQTTASIQKSLLESAASDRTGRLAKMLRDNPIDRDLAPTTMVTENGHASQTSGRRILL
SIO_010081: B0W47_RS16690
subclass of: SO_0000673
so part of: B0W47_RS16690
location: complement(17650..18210)
location: region:17650-18210:-1
so has part: feature:17650-18210:-1:exon

WP_078528493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17650-18210:-1:exon

B0W47_RS16695
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16695
old locus tag: B0W47_16990
so part of: sequence
location: complement(18420..20132)
location: region:18420-20132:-1
so has part: feature:18420-20132:-1:exon
subclass of: SO_0000010

position:18420:-1
position: 18420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20132:-1
position: 20132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18420-20132:-1:exon

B0W47_RS16695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16695
old locus tag: B0W47_16990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAERIIHTADLSAISGGLRTLSRNIEDVGERIDKVDDTVTITRKELFDLQAQFHQFLDIYNRATQVSLAETRLIKIRQELTSKFGHYDDVRRAAVGLLQATDISVVHTATMRDITEELMVLTPAYWLAPALVALAAWLRDDQPLAQRALGEALRRDDEKTSLFFALISRRAGRGNACATWLDRFLGQQNPMQLKRQTIILINATAGGVFGPNVQQVCYERLQAWIGELSDRAGFVEEQRVQWREALLSKIPEDQHGARYPHLERLCTNWADLNGQLNCAGLNTVFLDYMREIFESPLPASTRLAEAVDDLLTHLVTDHDAAELPLRKEEARLQSIIAQDGRVDIAEKHHDLEREAFEENVSFTQLLTNAAMHAERSGASRASQRLAFALSRAWVHNAFSDLTIETRRNQPDTAYLQIGNWTGQTHDGTEEKALRSSLEQHIHSECLAALALVKLGPKHVICGILGVLLLLSMFTGNFIFAFIGAALLAWVFFEYRGLEKKRDMVRDSFDRRAQSEKADLDGCLAEYVEWLRDFAARDAVATQTNAYIDAIAPDSHLALREESSRRILSNS
SIO_010081: B0W47_RS16695
subclass of: SO_0000673
so part of: B0W47_RS16695
location: complement(18420..20132)
location: region:18420-20132:-1
so has part: feature:18420-20132:-1:exon

WP_078528496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18420-20132:-1:exon

B0W47_RS16700
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16700
old locus tag: B0W47_16995
so part of: sequence
location: complement(20138..20635)
location: region:20138-20635:-1
so has part: feature:20138-20635:-1:exon
subclass of: SO_0000010

position:20138:-1
position: 20138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20635:-1
position: 20635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20138-20635:-1:exon

B0W47_RS16700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16700
old locus tag: B0W47_16995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006560184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTGLSLSFMVRQIFINKPGTIKLQTARQTAPMVSSSGRQLSVEQLRRRRSSSYVDALRKLDTGGPVSATGIDAIRDAVAAEFPDGPASWPLGWVSKCYLGAPYEVHIVDISGHIIRHFKRGEAMPGGMERARSLAASGRYAAIEVFSDRLVAIADDGTTSVSMG
SIO_010081: B0W47_RS16700
subclass of: SO_0000673
so part of: B0W47_RS16700
location: complement(20138..20635)
location: region:20138-20635:-1
so has part: feature:20138-20635:-1:exon

WP_236944710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20138-20635:-1:exon

B0W47_RS16705
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16705
old locus tag: B0W47_17000
pseudo: true
so part of: sequence
location: complement(20984..>21781)
location: region:20984-21781:-1
so has part: feature:20984-21781:-1:exon
subclass of: SO_0000010

position:20984:-1
position: 20984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21781:-1
position: 21781
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20984-21781:-1:exon

B0W47_RS16705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16705
old locus tag: B0W47_17000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612098.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: B0W47_RS16705
subclass of: SO_0000673
so part of: B0W47_RS16705
location: complement(20984..>21781)
location: region:20984-21781:-1
so has part: feature:20984-21781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20984-21781:-1:exon

B0W47_RS16710
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16710
old locus tag: B0W47_17005
so part of: sequence
location: complement(22054..23076)
location: region:22054-23076:-1
so has part: feature:22054-23076:-1:exon
subclass of: SO_0000010

position:22054:-1
position: 22054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23076:-1
position: 23076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22054-23076:-1:exon

B0W47_RS16710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16710
old locus tag: B0W47_17005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018860470.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MKDTVIGVDLAKNIFQVHGASRAGEVMFRKKLRRQQFMQFMATQPPALVVLEACGSAHYWARELAGAGHEVRLIAPQYVKPFVKRQKNDAADAEAIVIAARQPEMRFVEPRTEAQQARGVLFRARQRLVHQRTELVNALRAVLYEFGLVVPQGIAHIKRIEAMLDDAVLPDLVRQECLDLLQQISEQSVRIDARTKKIRMLAQESENTCRLQSMPGVGPLTALAIEAFAPDLQSFRRGRDFAAWLGLVPRQFSSGGKERLGKISKAGQADIRRLLIMGAMTLVNWASRKAPAPGSWLARMLARKPRMLVAIALANRMARAIWAMATKQEDYRDPALSVAA
SIO_010081: B0W47_RS16710
subclass of: SO_0000673
so part of: B0W47_RS16710
location: complement(22054..23076)
location: region:22054-23076:-1
so has part: feature:22054-23076:-1:exon

WP_078524646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22054-23076:-1:exon

B0W47_RS16715
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16715
old locus tag: B0W47_17010
pseudo: true
so part of: sequence
location: complement(<23179..23597)
location: region:23179-23597:-1
so has part: feature:23179-23597:-1:exon
subclass of: SO_0000010

position:23179:-1
position: 23179
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:23597:-1
position: 23597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23179-23597:-1:exon

B0W47_RS16715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16715
old locus tag: B0W47_17010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612098.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: B0W47_RS16715
subclass of: SO_0000673
so part of: B0W47_RS16715
location: complement(<23179..23597)
location: region:23179-23597:-1
so has part: feature:23179-23597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23179-23597:-1:exon

B0W47_RS16715
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 265960
locus tag: B0W47_RS16715
old locus tag: B0W47_17010
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.1
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: B0W47_RS16715
subclass of: SO_0000673
so part of: B0W47_RS16715
location: complement(23194..23310)
location: region:23194-23310:-1
so has part: feature:23194-23310:-1:exon

position:23194:-1
position: 23194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23310:-1
position: 23310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23194-23310:-1:exon

B0W47_RS16720
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16720
so part of: sequence
location: complement(23739..25388)
location: region:23739-25388:-1
so has part: feature:23739-25388:-1:exon
subclass of: SO_0000010

position:23739:-1
position: 23739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25388:-1
position: 25388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23739-25388:-1:exon

B0W47_RS16720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16720
inference: COORDINATES: protein motif:HMM:NF025587.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-oxoglutarate and iron-dependent oxygenase domain-containing protein
translation: MSTVIDGGRRELHAGECGIFINTTGRRSTYAPGSQVQWCETPLLELPAPVEQDFLGDRIRASPRIRTLFREGIGCGPYVSLALDTLRNALGEALFAAWRIEAGEGMAGHMPAPLLAARSYIDLHYAEKPDLETLAAVAGITPPYLIDLFRRHQGTTPMRYLRAVRAQAALRLIRHTDMSLARIADSTGYGSAFHLSREIRQFHDLSPRQIRQQGTHSNPSTQAGDAGRLPADSRFSPGPEVKRSSPMTHDIPVIDIGPLRQGNDAEREVVASAIGRACRETGFFYITGHGVSPDTIAKLFEAAHTFFTQPAAAKEAVAMSRVGRNRGYVGLGVERLDTTSLPDRKEAFNISPNQPDGQDAWPALPGWQDLMMAYFATCLDIGAALHRGFARDLGVDEDFFVDKFRHPMATLRLLRYPPAQQASTAPGAGAHTDYGNVTILAVNGVSGLQVRPRGSDWTDAPLIPGTFICNIGDCLMRWSNDVYVSTPHRVLRPAGERYSIAFFLDPDADALVEPIVTGSGKHAHYPPVTGHDYLQERLQATYGHKNQRH
SIO_010081: B0W47_RS16720
subclass of: SO_0000673
so part of: B0W47_RS16720
location: complement(23739..25388)
location: region:23739-25388:-1
so has part: feature:23739-25388:-1:exon

WP_078528507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23739-25388:-1:exon

B0W47_RS16725
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16725
old locus tag: B0W47_17030
so part of: sequence
location: complement(25779..26549)
location: region:25779-26549:-1
so has part: feature:25779-26549:-1:exon
subclass of: SO_0000010

position:25779:-1
position: 25779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26549:-1
position: 26549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25779-26549:-1:exon

B0W47_RS16725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16725
old locus tag: B0W47_17030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010511393.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: StbB
translation: MSDCHPVSAPRICVLSAAGGCGKTVIAFHLLAPFLQNPLLVCVKERIDFSGGLSPDNLLLVRNGDFGVVFEELTLNQGRPIIIDIDMTALEATCAKMKRFSGADEDIDVFLIPFTPEVYSIQRMIWTVRKLQACGISGQKIILVPNRLQDRTVSSSIEDVMKICEGPDAPRFFWDVFVEEDEIYNHFFRKQASFRSLLPCEFYRQKARDRHATREDRQNYASYAALAARAERVEPRLKQTFARLMAHISPGMAAAA
SIO_010081: B0W47_RS16725
subclass of: SO_0000673
so part of: B0W47_RS16725
location: complement(25779..26549)
location: region:25779-26549:-1
so has part: feature:25779-26549:-1:exon

WP_078528510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25779-26549:-1:exon

B0W47_RS16730
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16730
old locus tag: B0W47_17035
so part of: sequence
location: 26644..26868
location: region:26644-26868:1
so has part: feature:26644-26868:1:exon
subclass of: SO_0000010

position:26644:1
position: 26644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26868:1
position: 26868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26644-26868:1:exon

B0W47_RS16730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16730
old locus tag: B0W47_17035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010511395.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MDMRRLVGWNFSRIRRNKGLTQEQVAERSGFSQQYLSGLEKGVRNPTVVTLYELACVLDISPVEFLMPVEETGS
SIO_010081: B0W47_RS16730
subclass of: SO_0000673
so part of: B0W47_RS16730
location: 26644..26868
location: region:26644-26868:1
so has part: feature:26644-26868:1:exon

WP_078528513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26644-26868:1:exon

B0W47_RS18585
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS18585
so part of: sequence
location: 26906..27082
location: region:26906-27082:1
so has part: feature:26906-27082:1:exon
subclass of: SO_0000010

position:26906:1
position: 26906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27082:1
position: 27082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26906-27082:1:exon

B0W47_RS18585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS18585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010511397.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATDTNRFDRDREAEKDAATRQALAEIAAGRVVSAEAANAWIESLGTDHPLPMPEPGQ
SIO_010081: B0W47_RS18585
subclass of: SO_0000673
so part of: B0W47_RS18585
location: 26906..27082
location: region:26906-27082:1
so has part: feature:26906-27082:1:exon

WP_167370271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26906-27082:1:exon

B0W47_RS16740
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16740
old locus tag: B0W47_17045
so part of: sequence
location: complement(27504..27758)
location: region:27504-27758:-1
so has part: feature:27504-27758:-1:exon
subclass of: SO_0000010

position:27504:-1
position: 27504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27758:-1
position: 27758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27504-27758:-1:exon

B0W47_RS16740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16740
old locus tag: B0W47_17045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007396253.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRTYHHSRRHGRDHRWANRPDRCGYGGSREASESPNWYSHLHDIRPGRHHDRHIARLVIKGDLDPVEAVFPYTGTRRPHEYYW
SIO_010081: B0W47_RS16740
subclass of: SO_0000673
so part of: B0W47_RS16740
location: complement(27504..27758)
location: region:27504-27758:-1
so has part: feature:27504-27758:-1:exon

WP_078528516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27504-27758:-1:exon

B0W47_RS16745
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16745
old locus tag: B0W47_17050
so part of: sequence
location: complement(27835..28251)
location: region:27835-28251:-1
so has part: feature:27835-28251:-1:exon
subclass of: SO_0000010

position:27835:-1
position: 27835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28251:-1
position: 28251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27835-28251:-1:exon

B0W47_RS16745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16745
old locus tag: B0W47_17050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MRYPVVIERGSETTAFGVVFPDLPGCFSAGDTLDEAISNAEEAAAAWIDATLDAGEAVPFPSTLDAIQNNPDYEGWTVGFVTIDPAVLDDRVERANISLPRRVLERLDALARSSHESRSGMIAAMTLQARLTPVVRSK
SIO_010081: B0W47_RS16745
subclass of: SO_0000673
so part of: B0W47_RS16745
location: complement(27835..28251)
location: region:27835-28251:-1
so has part: feature:27835-28251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27835-28251:-1:exon

B0W47_RS16750
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16750
old locus tag: B0W47_17055
so part of: sequence
location: complement(28262..28441)
location: region:28262-28441:-1
so has part: feature:28262-28441:-1:exon
subclass of: SO_0000010

position:28262:-1
position: 28262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28441:-1
position: 28441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28262-28441:-1:exon

B0W47_RS16750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16750
old locus tag: B0W47_17055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019087453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MKSANLIRELEKAGWKLDRVRGSHNVFKHPSRPGIVVVPHPKKDLGTGLVAAIRKQAGL
SIO_010081: B0W47_RS16750
subclass of: SO_0000673
so part of: B0W47_RS16750
location: complement(28262..28441)
location: region:28262-28441:-1
so has part: feature:28262-28441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28262-28441:-1:exon

B0W47_RS16760
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16760
old locus tag: B0W47_17060
so part of: sequence
location: 29203..30138
location: region:29203-30138:1
so has part: feature:29203-30138:1:exon
subclass of: SO_0000010

position:29203:1
position: 29203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30138:1
position: 30138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29203-30138:1:exon

B0W47_RS16760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16760
old locus tag: B0W47_17060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012228322.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MSDNQELDIILLRSFLAVSETLHFTSAAQMRGVTQSTISQHINRLEQAVGASLLHRTTKQVELTPQGMQMVSFAQNIIHAQEMAMDYFRSGTLRAELRLGIAEDMVVSRFPEMLKRFRRLYPHVEVRLTVGLSRELYNLLDAGALDLICTKRKEGDERGIPLWRERLQWLGGGNFDTLAEGAVPLVLFSGNSITRVAAITAMNKVGRAWRASFMSSNLGALVAAVRSGYGVFAQSGLLVSQEIVPVPASAGLPPLPDVDFVMVGATEQLEGATRDLADLVIENIEGLAPPGSRIIAGTSPCGPDAREITAI
SIO_010081: B0W47_RS16760
subclass of: SO_0000673
so part of: B0W47_RS16760
location: 29203..30138
location: region:29203-30138:1
so has part: feature:29203-30138:1:exon

WP_078528519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29203-30138:1:exon

B0W47_RS16765
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16765
old locus tag: B0W47_17065
so part of: sequence
location: 30194..32539
location: region:30194-32539:1
so has part: feature:30194-32539:1:exon
subclass of: SO_0000010

position:30194:1
position: 30194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32539:1
position: 32539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30194-32539:1:exon

B0W47_RS16765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16765
old locus tag: B0W47_17065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014106244.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MVPCLSAPWRRQLFLHASFVMLVSPVISQAATLTTPTKVTHRDRVPPAATPAHTTAHAPAHQTPAAPESIKVSSQKMHFMRQQHVADSATHIDHQELVNRNVRQMTDIVRVAPNLTIQPSFGSAGLNFALRGVGLMDFTQNNTPSVMPYVDGVAYPISIMTSGMLFDMDSISVNPGPGGYTHGQMTTGGEINFHTADPTEQFHAGITEDIASYDRNRVTGFISGPISRSVLFRISGQSMTGGGYQHSASGQRFGNADLGALRAKLRWNIDDTTHLDIGGHWTTDQSEAASGHNLYNGYGVPINSDLMQTSWGLDPRFAKIIGIDGRNTKPREDNMFWGANIRFTKDFTWGRLTTLSAYESIDEHELSNQTDSVLSYGNMFRNNQSNVFSQEVKLESINPAARFHWTAGMYYSRTEQAQNFWYDSSDRPGTTPLNKTSYTEGMQTFNQYVELSYRVLPKLRLIGSITHESDDRHIRNVTSTNYNLNTGAIEGTPTNFGDAGALANEFSGHVGLQYQFRPNIMGYAMFSRGFKPGGFSANITELASQLKPFKPEQVITYEGGFKTTFFKNKLRFNGAGFYYDYRDQQVVSTVLVPPFGALSGYVNAPRSYIYGAEFDLEAHPIHGLSLTQNFGYQHGVYSQFQSLNRTATTNQFTQTGVWSAINTNYDNYSMGLANLTLSGAATYSWHVLRDYQMTFDVDYSYRGAQTQPQHIGDSGIYRAPAYFLVNSFLTFASPKQHWSATVYAQNLADRRYWLSGGTQATFYGVIPGLPRFVGARLNYTY
SIO_010081: B0W47_RS16765
subclass of: SO_0000673
so part of: B0W47_RS16765
location: 30194..32539
location: region:30194-32539:1
so has part: feature:30194-32539:1:exon

WP_078528522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30194-32539:1:exon

B0W47_RS16770
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16770
old locus tag: B0W47_17070
so part of: sequence
location: 32643..33881
location: region:32643-33881:1
so has part: feature:32643-33881:1:exon
subclass of: SO_0000010

position:32643:1
position: 32643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33881:1
position: 33881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32643-33881:1:exon

B0W47_RS16770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16770
old locus tag: B0W47_17070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014106245.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015293 - symporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:dicarboxylase symporter family transporter
translation: MFMQVVIASVLGLGLGLIDPALAMQTRWTTDIFLRLIVMAVGPLLFCIVVMGIVGAGSLRTVGRMGIKALVYFEVMTTFALVMAVGIGMLVQPGRAIVFTPTVEDAQMVASYAQNAHLLHEGGITAFILSLIPHSPTDAFAQANVLQILFFAILFGCCLSLIGEAGAPLVRLVDALAVLFARMMRLIIALAPLGVFGAMATTTAHYGMNAIMHLAAFVGLYFVVIALFIIIALGGCLRLSGVNPWCFLRYFREELAITFTTTTSDAVLPSVMEKLRRMGVDPQVVGLVVPAGYSFNLDALSIYLGLAVVFLAQATGTHLSTWQMVIMLTTALFTSKGAHGVPGIAIVVLAATLAAIPSIPVASLVMLLAVDWFIGIARAVGNLAGNCVAPIVIGAWEGRLDREKMARVLAQD
SIO_010081: B0W47_RS16770
subclass of: SO_0000673
so part of: B0W47_RS16770
location: 32643..33881
location: region:32643-33881:1
so has part: feature:32643-33881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32643-33881:1:exon

B0W47_RS16775
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16775
old locus tag: B0W47_17075
pseudo: true
so part of: sequence
location: 33915..34632
location: region:33915-34632:1
so has part: feature:33915-34632:1:exon
subclass of: SO_0000010

position:33915:1
position: 33915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34632:1
position: 34632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33915-34632:1:exon

B0W47_RS16775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16775
old locus tag: B0W47_17075
inference: COORDINATES: protein motif:HMM:NF014653.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Ldh family oxidoreductase
SIO_010081: B0W47_RS16775
subclass of: SO_0000673
so part of: B0W47_RS16775
location: 33915..34632
location: region:33915-34632:1
so has part: feature:33915-34632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33915-34632:1:exon

B0W47_RS19080
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS19080
so part of: sequence
location: 34626..34943
location: region:34626-34943:1
so has part: feature:34626-34943:1:exon
subclass of: SO_0000010

position:34626:1
position: 34626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34943:1
position: 34943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34626-34943:1:exon

B0W47_RS19080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS19080
inference: COORDINATES: protein motif:HMM:NF014653.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ldh family oxidoreductase
translation: MVSILSAVLTGAMIDPRMIQMTDTSDFTTPRNVGHFCIVLDPARFVGREGFDRALKDYLAMLRAILSTTAGESVMAPGDREWKTMEERKRTGIPVDPDTRGFLKL
SIO_010081: B0W47_RS19080
subclass of: SO_0000673
so part of: B0W47_RS19080
location: 34626..34943
location: region:34626-34943:1
so has part: feature:34626-34943:1:exon

WP_250637989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34626-34943:1:exon

B0W47_RS16780
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16780
pseudo: true
so part of: sequence
location: complement(35078..>35696)
location: region:35078-35696:-1
so has part: feature:35078-35696:-1:exon
subclass of: SO_0000010

position:35078:-1
position: 35078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35696:-1
position: 35696
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35078-35696:-1:exon

B0W47_RS16780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019088886.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: B0W47_RS16780
subclass of: SO_0000673
so part of: B0W47_RS16780
location: complement(35078..>35696)
location: region:35078-35696:-1
so has part: feature:35078-35696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35078-35696:-1:exon

B0W47_RS18165
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS18165
old locus tag: B0W47_17090
pseudo: true
so part of: sequence
location: complement(<35705..35875)
location: region:35705-35875:-1
so has part: feature:35705-35875:-1:exon
subclass of: SO_0000010

position:35705:-1
position: 35705
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:35875:-1
position: 35875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35705-35875:-1:exon

B0W47_RS18165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS18165
old locus tag: B0W47_17090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015821555.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: B0W47_RS18165
subclass of: SO_0000673
so part of: B0W47_RS18165
location: complement(<35705..35875)
location: region:35705-35875:-1
so has part: feature:35705-35875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35705-35875:-1:exon

B0W47_RS16785
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16785
old locus tag: B0W47_17095
so part of: sequence
location: 36136..36549
location: region:36136-36549:1
so has part: feature:36136-36549:1:exon
subclass of: SO_0000010

position:36136:1
position: 36136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36549:1
position: 36549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36136-36549:1:exon

B0W47_RS16785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16785
old locus tag: B0W47_17095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011982806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTRVGYARISTTDQNLDIQIAHLKAGGCEIIRSETGSGGSRNGRTELETIMQFLRSGDELVVLRLDRLGRSTRDVLNLVHELEEKGASLRVLEPDVTTAGAMGRMVITILGMVADMELKFIKDRQRAGIEAAKAQRT
SIO_010081: B0W47_RS16785
subclass of: SO_0000673
so part of: B0W47_RS16785
location: 36136..36549
location: region:36136-36549:1
so has part: feature:36136-36549:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36136-36549:1:exon

B0W47_RS16790
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16790
so part of: sequence
location: complement(36559..37315)
location: region:36559-37315:-1
so has part: feature:36559-37315:-1:exon
subclass of: SO_0000010

position:36559:-1
position: 36559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37315:-1
position: 37315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36559-37315:-1:exon

B0W47_RS16790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611976.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MSDLFWLTDEQMERLRPFFPKSHGKPRVDDRRVLNGIIFVNRNGMRWRDAPREYGPHKTLYNRWMRMGDMGIFMLLMDGLSAAKAEPQTIMIVSTYLKSHRTASSLRLKKGSRGRLIGRTKGGMNTKLHAITDQNGRPLSFFMTAGQISDYTGASALLSSLPMAQWLLADRGYDADWFRDALEEKGIRPCIPGRRSRGKPVKYDKRKYKRRNRIEIMFGRLKDWRRVATRYDRCPNVFFSAICLAATVIFWL
SIO_010081: B0W47_RS16790
subclass of: SO_0000673
so part of: B0W47_RS16790
location: complement(join(36559..36979,36978..37315))
location: region:36559-37315:-1
so has part: feature:36978-37315:-1:exon
so has part: feature:36559-36979:-1:exon

WP_151892050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36978-37315:-1:exon

position:36978:-1
position: 36978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36559-36979:-1:exon

position:36979:-1
position: 36979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

B0W47_RS16795
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16795
old locus tag: B0W47_17110
so part of: sequence
location: 37425..37514
location: region:37425-37514:1
so has part: feature:37425-37514:1:exon
subclass of: SO_0000010

position:37425:1
position: 37425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37514:1
position: 37514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37425-37514:1:exon

B0W47_RS16795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16795
old locus tag: B0W47_17110
inference: COORDINATES: protein motif:HMM:NF014814.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MAAGESKAGVARELKISRMTVYRALETID
SIO_010081: B0W47_RS16795
subclass of: SO_0000673
so part of: B0W47_RS16795
location: 37425..37514
location: region:37425-37514:1
so has part: feature:37425-37514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37425-37514:1:exon

B0W47_RS16800
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16800
old locus tag: B0W47_17115
so part of: sequence
location: complement(37732..38013)
location: region:37732-38013:-1
so has part: feature:37732-38013:-1:exon
subclass of: SO_0000010

position:37732:-1
position: 37732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38013:-1
position: 38013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37732-38013:-1:exon

B0W47_RS16800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16800
old locus tag: B0W47_17115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017276173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MKYEWTAKAVSDLQTLAANFDHPSGAARVMRRLTAAPDVLIQFPRMGTLLPVFSPREVRRFIVDDYEIRYEVTADALFITDVFHTRQDRETFH
SIO_010081: B0W47_RS16800
subclass of: SO_0000673
so part of: B0W47_RS16800
location: complement(37732..38013)
location: region:37732-38013:-1
so has part: feature:37732-38013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37732-38013:-1:exon

B0W47_RS16805
type: Gene
subclass of: SO_0000704
RO_0002162: 265960
locus tag: B0W47_RS16805
old locus tag: B0W47_17120
so part of: sequence
location: complement(38010..38297)
location: region:38010-38297:-1
so has part: feature:38010-38297:-1:exon
subclass of: SO_0000010

position:38010:-1
position: 38010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38297:-1
position: 38297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38010-38297:-1:exon

B0W47_RS16805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 265960
locus tag: B0W47_RS16805
old locus tag: B0W47_17120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003631008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MSEKLSAGKQVVSVQMPADLVDAMDRYGEAIERPRSWVMREAVASYLAYEAEKDRVTRRALADVDAGRTISAEAVKAWADSLDQANPLPLPEPKR
SIO_010081: B0W47_RS16805
subclass of: SO_0000673
so part of: B0W47_RS16805
location: complement(38010..38297)
location: region:38010-38297:-1
so has part: feature:38010-38297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38010-38297:-1:exon