Streptomyces phaeolivaceus strain GY16 plasmid unnamed1, complete sequence.
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.
Streptomyces sp. strain GY16 isolated from leaves of Broussonetia papyrifera
Submitted (08-OCT-2019) College of Life Science and Technology, Central South University of Forestry and Technology, No. 498, Shaoshan South Road, Changsha, Hunan 410004, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP045095.1.\nBacteria and source DNA available from Yunlin Zhao.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 15-AUG-2019\nAssembly Method :: HGAP v. v. 1.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 120.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/30/2022 07:08:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 9,099\nCDSs (total) :: 9,010\nGenes (coding) :: 8,591\nCDSs (with protein) :: 8,591\nGenes (RNA) :: 89\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 68\nncRNAs :: 3\nPseudo Genes (total) :: 419\nCDSs (without protein) :: 419\nPseudo Genes (ambiguous residues) :: 0 of 419\nPseudo Genes (frameshifted) :: 132 of 419\nPseudo Genes (incomplete) :: 333 of 419\nPseudo Genes (internal stop) :: 26 of 419\nPseudo Genes (multiple problems) :: 68 of 419\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Streptomyces phaeolivaceus
COORDINATES: similar to AA sequence:RefSeq:WP_014386324.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020477443.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386326.1
TraM recognition domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014386328.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386329.1
COORDINATES: similar to AA sequence:RefSeq:WP_017238144.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386332.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386333.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386336.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386338.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386339.1
nuclease-related domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014386340.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386341.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386342.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386345.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386346.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386347.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386348.1
COORDINATES: similar to AA sequence:RefSeq:WP_019061668.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019061667.1
COORDINATES: similar to AA sequence:RefSeq:WP_018844147.1
COORDINATES: similar to AA sequence:RefSeq:WP_003979003.1
DUF6415 family natural product biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_014043917.1
COORDINATES: similar to AA sequence:RefSeq:WP_007490576.1
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007505234.1
COORDINATES: protein motif:HMM:NF040364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386356.1
COORDINATES: similar to AA sequence:RefSeq:WP_017238185.1
COORDINATES: similar to AA sequence:RefSeq:WP_017238186.1
COORDINATES: similar to AA sequence:RefSeq:WP_020665677.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386305.1
COORDINATES: protein motif:HMM:NF013122.2
COORDINATES: similar to AA sequence:RefSeq:WP_018534253.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386311.1
COORDINATES: similar to AA sequence:RefSeq:WP_017238203.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386313.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386314.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386315.1
COORDINATES: similar to AA sequence:RefSeq:WP_017238129.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274011.1
COORDINATES: similar to AA sequence:RefSeq:WP_016640616.1
COORDINATES: similar to AA sequence:RefSeq:WP_019521249.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014386319.1
COORDINATES: similar to AA sequence:RefSeq:WP_017238134.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386321.1
COORDINATES: similar to AA sequence:RefSeq:WP_014386322.1