Halorussus halophilus strain ZS-3 plasmid unnamed1, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haladaptataceae; Halorussus.
Complete genome of Halorussus sp. ZS-3, an extremely halophlic archaeon isolated from a marine solar saltern
Submitted (30-SEP-2019) School of Food & Biological Engineering, Jiangsu University, 301 Xuefu Road, Jingkou District, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP044524.1.\nBacteria and source DNA available from School of Food and\nBiological EngineeringJiangsu University.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: JUL-2018\nAssembly Method :: Celera Assembler v. June-2018\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 279.0x\nSequencing Technology :: PacBio; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 10:55:07\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,476\nCDSs (total) :: 4,419\nGenes (coding) :: 4,384\nCDSs (with protein) :: 4,384\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 2\nPseudo Genes (total) :: 35\nCDSs (without protein) :: 35\nPseudo Genes (ambiguous residues) :: 0 of 35\nPseudo Genes (frameshifted) :: 3 of 35\nPseudo Genes (incomplete) :: 28 of 35\nPseudo Genes (internal stop) :: 8 of 35\nPseudo Genes (multiple problems) :: 3 of 35\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014039310.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
transglutaminaseTgpA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006067653.1
COORDINATES: similar to AA sequence:RefSeq:WP_008609311.1
COORDINATES: protein motif:HMM:NF012514.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006076434.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007977096.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF037270.2
COORDINATES: protein motif:HMM:NF021601.2
COORDINATES: protein motif:HMM:NF025025.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004056835.1
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004215105.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008418946.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015321456.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008323672.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007539250.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021127.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO:0045227 - capsule polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012807630.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091993.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008424828.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418206.1
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF014686.2
COORDINATES: similar to AA sequence:RefSeq:WP_006068193.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008457469.1
COORDINATES: similar to AA sequence:RefSeq:WP_008455938.1
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004976528.1
heavy metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007977117.1
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF016831.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008323959.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977258.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945401.1
GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020221253.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021577.2
COORDINATES: protein motif:HMM:NF014442.2
TaqI-like C-terminal specificity domain-containing protein
COORDINATES: protein motif:HMM:NF016144.2
COORDINATES: similar to AA sequence:RefSeq:WP_006054410.1
ribonuclease H-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007978148.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008895309.1
COORDINATES: similar to AA sequence:RefSeq:WP_004973734.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009761046.1
COORDINATES: similar to AA sequence:RefSeq:WP_005042314.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762095.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976802.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008414829.1
COORDINATES: similar to AA sequence:RefSeq:WP_006431069.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012945328.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188241.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274155.1
COORDINATES: similar to AA sequence:RefSeq:WP_008849128.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077819.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007141092.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014050645.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007141089.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367322.1
COORDINATES: similar to AA sequence:RefSeq:WP_008389710.1
acyl-CoA thioesterase/bile acid-CoA:amino acid N-acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006886011.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007188559.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977165.1
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007257598.1
COORDINATES: similar to AA sequence:RefSeq:WP_008416582.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977160.1
COORDINATES: similar to AA sequence:RefSeq:WP_008427627.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977142.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652990.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056970.1
GO:0016208 - AMP binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006090343.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008324715.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006666237.1
COORDINATES: similar to AA sequence:RefSeq:WP_007702999.1
COORDINATES: similar to AA sequence:RefSeq:WP_004064425.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978089.1
COORDINATES: protein motif:HMM:TIGR04126.1
PGF-CTERM sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008417207.1
COORDINATES: similar to AA sequence:RefSeq:WP_007997758.1
GO:0008869 - galactonate dehydratase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006089691.1
menaquinone-dependent protoporphyrinogen IX dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004965345.1
COORDINATES: protein motif:HMM:NF036897.2
COORDINATES: similar to AA sequence:RefSeq:WP_007978096.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978099.1
COORDINATES: similar to AA sequence:RefSeq:WP_006057022.1
TrmB family transcriptional regulator sugar-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006111103.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007978109.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006885105.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007692400.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - monoatomic anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: similar to AA sequence:RefSeq:WP_008579246.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004056249.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007981765.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980959.1
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005580815.1
COORDINATES: similar to AA sequence:RefSeq:WP_007107565.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005578060.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008323045.1
COORDINATES: protein motif:HMM:TIGR02504.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_007978114.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041929.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_007978120.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978122.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008849709.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267201.1
COORDINATES: similar to AA sequence:RefSeq:WP_008091488.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015789384.1
spore germination protein GerW family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008417150.1
COORDINATES: similar to AA sequence:RefSeq:WP_006179631.1
COORDINATES: similar to AA sequence:RefSeq:WP_004044564.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
translation elongation factor EF-1 subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012996684.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007693027.1
COORDINATES: similar to AA sequence:RefSeq:WP_007539248.1
COORDINATES: similar to AA sequence:RefSeq:WP_006664362.1
COORDINATES: similar to AA sequence:RefSeq:WP_004215339.1
COORDINATES: similar to AA sequence:RefSeq:WP_015910702.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007345991.1
COORDINATES: similar to AA sequence:RefSeq:WP_007697266.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666421.1
COORDINATES: similar to AA sequence:RefSeq:WP_008423943.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007976937.1
COORDINATES: similar to AA sequence:RefSeq:WP_007273318.1
COORDINATES: similar to AA sequence:RefSeq:WP_004516649.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976921.1
COORDINATES: similar to AA sequence:RefSeq:WP_012996944.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF014200.2
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_006091148.1
COORDINATES: similar to AA sequence:RefSeq:WP_006092881.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213470.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652867.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976929.1
COORDINATES: similar to AA sequence:RefSeq:WP_018128809.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213479.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004213463.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976935.1
COORDINATES: similar to AA sequence:RefSeq:WP_005042323.1
COORDINATES: similar to AA sequence:RefSeq:WP_018257981.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008575086.1
COORDINATES: similar to AA sequence:RefSeq:WP_008442447.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143389.1
COORDINATES: protein motif:HMM:NF014567.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_004516743.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006886004.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009367328.1
COORDINATES: similar to AA sequence:RefSeq:WP_007141090.1
COORDINATES: similar to AA sequence:RefSeq:WP_008576013.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012944420.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977184.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007977186.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007691609.1
COORDINATES: similar to AA sequence:RefSeq:WP_009366575.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_013440600.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980594.1
COORDINATES: similar to AA sequence:RefSeq:WP_008528372.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007980596.1
COORDINATES: similar to AA sequence:RefSeq:WP_015789926.1
COORDINATES: similar to AA sequence:RefSeq:WP_006064589.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388610.1
COORDINATES: similar to AA sequence:RefSeq:WP_008321346.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007980618.1
COORDINATES: protein motif:HMM:NF027245.2
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
bacterio-opsin activator domain-containing protein
COORDINATES: protein motif:HMM:NF024583.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007143480.1
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:NF016908.2
COORDINATES: similar to AA sequence:RefSeq:WP_007980648.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977130.1
COORDINATES: similar to AA sequence:RefSeq:WP_010902785.1
GO:0016829 - lyase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
CbiX/SirB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015320337.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981965.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006432345.1
COORDINATES: similar to AA sequence:RefSeq:WP_004046530.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977132.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980330.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060466.1
COORDINATES: similar to AA sequence:RefSeq:WP_013881929.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213995.1
COORDINATES: similar to AA sequence:RefSeq:WP_004598248.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007977139.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978064.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978070.1
COORDINATES: protein motif:HMM:NF028516.2
COORDINATES: similar to AA sequence:RefSeq:WP_008848796.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007978060.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978059.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007139985.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007993349.1
GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA]
CDGSH iron-sulfur domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006092851.1
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: similar to AA sequence:RefSeq:WP_006886080.1
cation:proton antiporter regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009761580.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_014050987.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004055461.1
COORDINATES: similar to AA sequence:RefSeq:WP_015761632.1
GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007981810.1
COORDINATES: similar to AA sequence:RefSeq:WP_006169162.1
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885885.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_007541293.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978150.1
COORDINATES: similar to AA sequence:RefSeq:WP_006884266.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016906.2
COORDINATES: similar to AA sequence:RefSeq:WP_008894021.1
COORDINATES: similar to AA sequence:RefSeq:WP_008012753.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_004977965.1
COORDINATES: similar to AA sequence:RefSeq:WP_013862914.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076099.1
COORDINATES: similar to AA sequence:RefSeq:WP_009377313.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006020061.1
formylglycine-generating enzyme family protein
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006092803.1
COORDINATES: similar to AA sequence:RefSeq:WP_004057478.1
COORDINATES: similar to AA sequence:RefSeq:WP_006181501.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383808.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006078791.1
COORDINATES: similar to AA sequence:RefSeq:WP_008317181.1
cytochrome C oxidase subunit IV family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006054377.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600239.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009375625.1
COORDINATES: similar to AA sequence:RefSeq:WP_005537519.1
COORDINATES: similar to AA sequence:RefSeq:WP_018257751.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875648.1
COORDINATES: similar to AA sequence:RefSeq:WP_013440767.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004976090.1
COORDINATES: similar to AA sequence:RefSeq:WP_005537298.1
COORDINATES: similar to AA sequence:RefSeq:WP_004967151.1
GO:0050421 - nitrite reductase (NO-forming) activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006076851.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385149.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344028.1
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_009487255.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061603.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968593.1
COORDINATES: similar to AA sequence:RefSeq:WP_007689753.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055799.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267143.1
COORDINATES: protein motif:HMM:NF024804.2
COORDINATES: similar to AA sequence:RefSeq:WP_005044102.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693915.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885910.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008322008.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - DNA transposition [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004048351.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222290.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018257633.1
COORDINATES: similar to AA sequence:RefSeq:WP_006180867.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827323.1
COORDINATES: similar to AA sequence:RefSeq:WP_009761883.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_007980703.1
COORDINATES: similar to AA sequence:RefSeq:WP_010903278.1
COORDINATES: similar to AA sequence:RefSeq:WP_004973360.1
COORDINATES: similar to AA sequence:RefSeq:WP_006430457.1
COORDINATES: similar to AA sequence:RefSeq:WP_015302058.1
COORDINATES: similar to AA sequence:RefSeq:WP_007700431.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388562.1
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: similar to AA sequence:RefSeq:WP_007540958.1
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
CPBP family glutamic-type intramembrane protease
COORDINATES: similar to AA sequence:RefSeq:WP_006666995.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385350.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653818.1
COORDINATES: similar to AA sequence:RefSeq:WP_008094437.1
COORDINATES: similar to AA sequence:RefSeq:WP_008325968.1
COORDINATES: similar to AA sequence:RefSeq:WP_008004979.1
COORDINATES: similar to AA sequence:RefSeq:WP_004048654.1
COORDINATES: similar to AA sequence:RefSeq:WP_012659333.1
COORDINATES: similar to AA sequence:RefSeq:WP_007699075.1
COORDINATES: similar to AA sequence:RefSeq:WP_007703237.1
COORDINATES: similar to AA sequence:RefSeq:WP_007703238.1
COORDINATES: similar to AA sequence:RefSeq:WP_007703241.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762155.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762156.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043519.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594581.1
GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]; GO:0043682 - P-type divalent copper transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015299307.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055406.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: similar to AA sequence:RefSeq:WP_014051996.1
COORDINATES: similar to AA sequence:RefSeq:WP_006651826.1
COORDINATES: similar to AA sequence:RefSeq:WP_008002898.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007141704.1
mRNA cleavage and polyadenylation specificity factor-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_009378327.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572866.1
COORDINATES: similar to AA sequence:RefSeq:WP_005045583.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_015188137.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008422767.1
COORDINATES: similar to AA sequence:RefSeq:WP_009761707.1
COORDINATES: similar to AA sequence:RefSeq:WP_014864570.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043980.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979334.1
COORDINATES: similar to AA sequence:RefSeq:WP_008414773.1
COORDINATES: similar to AA sequence:RefSeq:WP_008443931.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006076586.1
MTAP family purine nucleoside phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_010247385.1
D-lyxose/D-mannose family sugar isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007743001.1
COORDINATES: protein motif:HMM:NF016300.2
COORDINATES: similar to AA sequence:RefSeq:WP_004965208.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016873255.1
COORDINATES: similar to AA sequence:RefSeq:WP_009365799.1
COORDINATES: similar to AA sequence:RefSeq:WP_005577287.1
COORDINATES: similar to AA sequence:RefSeq:WP_004064019.1
COORDINATES: similar to AA sequence:RefSeq:WP_011572387.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005538350.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014556831.1
COORDINATES: similar to AA sequence:RefSeq:WP_014556832.1
COORDINATES: similar to AA sequence:RefSeq:WP_009359918.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_004041187.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: similar to AA sequence:RefSeq:WP_004055384.1
COORDINATES: protein motif:HMM:NF020897.2
COORDINATES: similar to AA sequence:RefSeq:WP_007189351.1
COORDINATES: similar to AA sequence:RefSeq:WP_014052871.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572117.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050747.1
COORDINATES: similar to AA sequence:RefSeq:WP_004040846.1
COORDINATES: similar to AA sequence:RefSeq:WP_008093868.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014050744.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143708.1
COORDINATES: similar to AA sequence:RefSeq:WP_006114773.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980535.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007980577.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266936.1
COORDINATES: protein motif:HMM:NF040371.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_008573904.1
COORDINATES: similar to AA sequence:RefSeq:WP_006884331.1
COORDINATES: similar to AA sequence:RefSeq:WP_009761800.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009761790.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_008326017.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007689985.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014102.2
COORDINATES: similar to AA sequence:RefSeq:WP_007977245.1
COORDINATES: similar to AA sequence:RefSeq:WP_005039930.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007976456.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056624.1
COORDINATES: similar to AA sequence:RefSeq:WP_012943175.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_008527013.1
COORDINATES: similar to AA sequence:RefSeq:WP_013880510.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385686.1
COORDINATES: similar to AA sequence:RefSeq:WP_008318683.1
COORDINATES: similar to AA sequence:RefSeq:WP_008607769.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: similar to AA sequence:RefSeq:WP_006053507.1
COORDINATES: similar to AA sequence:RefSeq:WP_004054120.1
COORDINATES: similar to AA sequence:RefSeq:WP_005044626.1
COORDINATES: protein motif:HMM:NF012452.2
COORDINATES: similar to AA sequence:RefSeq:WP_006112936.1
COORDINATES: similar to AA sequence:RefSeq:WP_012941858.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980732.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980731.1
COORDINATES: similar to AA sequence:RefSeq:WP_008417641.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014052947.1
COORDINATES: similar to AA sequence:RefSeq:WP_007690136.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006076304.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004516109.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896505.1
COORDINATES: similar to AA sequence:RefSeq:WP_015764099.1
COORDINATES: similar to AA sequence:RefSeq:WP_014868480.1
COORDINATES: similar to AA sequence:RefSeq:WP_006883485.1
COORDINATES: similar to AA sequence:RefSeq:WP_008014562.1
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:NF024842.2
COORDINATES: similar to AA sequence:RefSeq:WP_014863889.1
COORDINATES: similar to AA sequence:RefSeq:WP_009375824.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980698.1
GO:0004062 - aryl sulfotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005575924.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007692033.1
COORDINATES: similar to AA sequence:RefSeq:WP_007982936.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214320.1
COORDINATES: similar to AA sequence:RefSeq:WP_007742178.1
COORDINATES: similar to AA sequence:RefSeq:WP_006881825.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - intracellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007979205.1
COORDINATES: similar to AA sequence:RefSeq:WP_008003974.1
COORDINATES: similar to AA sequence:RefSeq:WP_006054861.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009376084.1
COORDINATES: similar to AA sequence:RefSeq:WP_009366991.1
COORDINATES: similar to AA sequence:RefSeq:WP_007539045.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980689.1
COORDINATES: similar to AA sequence:RefSeq:WP_008441677.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980687.1
GO:0020037 - heme binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009366710.1
COORDINATES: similar to AA sequence:RefSeq:WP_007982422.1
COORDINATES: similar to AA sequence:RefSeq:WP_005044629.1
COORDINATES: similar to AA sequence:RefSeq:WP_012942531.1
COORDINATES: similar to AA sequence:RefSeq:WP_004045090.1
COORDINATES: protein motif:HMM:NF019407.2
COORDINATES: similar to AA sequence:RefSeq:WP_006054675.1
COORDINATES: similar to AA sequence:RefSeq:WP_008893481.1
COORDINATES: similar to AA sequence:RefSeq:WP_004042036.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006054002.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978162.1
COORDINATES: protein motif:HMM:NF024948.2
COORDINATES: similar to AA sequence:RefSeq:WP_007978159.1
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_004050677.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013998.2