Pukyongiella litopenaei strain SH-1 plasmid p2, complete sequence.
type: Entry
definition: Pukyongiella litopenaei strain SH-1 plasmid p2, complete sequence.
sequence version: NZ_CP043620.1
sequence date: 2023-04-26
sequence: sequence
division: CON
label: NZ_CP043620.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN08643256
keyword: RefSeq
source: Pukyongiella litopenaei
organism: Pukyongiella litopenaei
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Pukyongiella.
reference: 1
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP043620.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 06-MAR-2018\nAssembly Method :: HGAP v. 3.0\nAssembly Name :: SH-1 chromosome and plasmids\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 218.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/26/2023 06:03:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,189\nCDSs (total) :: 4,141\nGenes (coding) :: 4,049\nCDSs (with protein) :: 4,049\nGenes (RNA) :: 48\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 42\nncRNAs :: 3\nPseudo Genes (total) :: 92\nCDSs (without protein) :: 92\nPseudo Genes (ambiguous residues) :: 0 of 92\nPseudo Genes (frameshifted) :: 22 of 92\nPseudo Genes (incomplete) :: 75 of 92\nPseudo Genes (internal stop) :: 14 of 92\nPseudo Genes (multiple problems) :: 17 of 92\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 78245
topology: circular
so has quality: SO_0000988
location: 1..78245
location: region:1-78245:1
RO_0002162: 2605946

NZ_CP043620
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN08643256
type: BioSample
SIO_000068: biosample

1
title: Novel bacterium SH-1
author: Kim, Y.-S.
author: Kim, K.-H.
journal: Unpublished

2
title: Direct Submission
author: Kim, Y.-S.
author: Kim, K.-H.
journal: Submitted (11-SEP-2019) Microbiology, Pukyong National University, Yongso-Ro, Busan KS012, South Korea
comments: Annotation update by database at the request of the submitter due to the addition of plasmids to the assembly

3
title: Direct Submission
author: Kim, Y.-S.
author: Kim, K.-H.
journal: Submitted (29-AUG-2019) Microbiology, Pukyong National University, Yongso-Ro, Busan KS012, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78245:1
position: 78245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-78245:1:source
so part of: sequence
organism: Pukyongiella litopenaei
mol type: genomic DNA
strain: SH-1
isolation source: intestine content
host: Penaeus vannamei (shrimp)
culture collection: KCTC:62276
type material: type strain of Pukyongiella litopenaei
plasmid: p2
country: South Korea
collection date: 2017-05-19

2605946
type: Taxonomy
SIO_000068: taxonomy

C6Y53_RS19820
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
gene: repB
locus tag: C6Y53_RS19820
old locus tag: C6Y53_19915
so part of: sequence
location: join(77704..78245,1..388)
location: region:1-78245:1
so has part: feature:77704-78245:1:exon
so has part: feature:1-388:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:77704-78245:1:exon

position:77704:1
position: 77704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-388:1:exon

position:388:1
position: 388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C6Y53_RS19820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
gene: repB
locus tag: C6Y53_RS19820
old locus tag: C6Y53_19915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820070.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MARKPKLGLPLQTLRNAPDALEGRRLRGGVFEIDPAQIVTEGRLDDRLQIEVEGLKNSISKNGQRVPVLVRPLEGDRYNLIYGRRRLEACRELGIKVRAIVTEVDGDQALRDQLLENQERRDLSFIERALVATALLDGDHLEGAERTNRGVAEVLNLHEAGVSQLLSVVRAVGEELIQAIGAAPGIGRPRWEELKKALGTYDGDRDQLQAVAHAAKSESSGSVDEVSERAFLAVLAAAKSPEKKANPSRKGVPALAIPGVGAATVKTGRQGKQLKLDLTTDEPDFISWLEGNAPKLITELHERWKRSGD
SIO_010081: C6Y53_RS19820
subclass of: SO_0000673
so part of: C6Y53_RS19820
location: join(77704..78245,1..388)
location: region:1-78245:1
so has part: feature:77704-78245:1:exon
so has part: feature:1-388:1:exon

WP_149615696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77704-78245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-388:1:exon

C6Y53_RS19825
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
gene: repC
locus tag: C6Y53_RS19825
old locus tag: C6Y53_19920
so part of: sequence
location: 602..1813
location: region:602-1813:1
so has part: feature:602-1813:1:exon
subclass of: SO_0000010

position:602:1
position: 602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1813:1
position: 1813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602-1813:1:exon

C6Y53_RS19825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
gene: repC
locus tag: C6Y53_RS19825
old locus tag: C6Y53_19920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187387.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MEYTPISPFMRPISHAHLRVIERPEASVPGRPVNKWELLRELSKAQAAFGVSERDLTVLQGLLSFFPDDALGGNAEMVVFPSNKAICERLNGMPCSTMRRHLARLVEAGLLQRRDSPNGKRYVRKHGEERVAFGFDLSPLYCQSEEIARAAEAVREAEERVRRLREVVSLMRRDLAALAEFGDEMQPGLGFWDQLRDKAILTARALRRKLSIEDLAAYRADLEALLDQARNIIDGSETEEMNTNDARSERHHHNSNKESIELEPALEKSGAAAGVPDVDRDEPVADVDEQDTRHLPKIPLHLVIAACPSLKTFYQGEIRHWHQLFDAACHVRPAMGISASAWEEAQRFMGPEQASIVVSAMLERFEDIRSPGGYLRALTAKAVAGEFSCGPMVMALIGRRSAA
SIO_010081: C6Y53_RS19825
subclass of: SO_0000673
so part of: C6Y53_RS19825
location: 602..1813
location: region:602-1813:1
so has part: feature:602-1813:1:exon

WP_149615729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:602-1813:1:exon

C6Y53_RS19830
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19830
old locus tag: C6Y53_19925
so part of: sequence
location: 1994..4162
location: region:1994-4162:1
so has part: feature:1994-4162:1:exon
subclass of: SO_0000010

position:1994:1
position: 1994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4162:1
position: 4162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994-4162:1:exon

C6Y53_RS19830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19830
old locus tag: C6Y53_19925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574206.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MAKSAQKVTLSPSRDIPFDKLVLSQANVRRIKAGISVEELAEDIARRGLLQSLSVRPILADDGSETGKFEIPAGGRRFQALSLLVKQKRLAKTTPIPCIVRDATSAILAEDDSLAENMQRAALHPLDQFRAFVVLREKGQGDEEIAAAFFVTPQVVKQRLKLAAVAPALLEFYAEDEMTLEQLMAFTVNPDHERQVQVWEAIKSSWNKEPYQIRRMLTETSVRASDRRAVFVGVEAYEAAGGTMLHDLFQGDDGGWLEDPALLDRLVSEKLQAEAEAIATESWKWIEVSLDLPYGYSHGLRRLSGDPAPMTDDEGAAHAKLLAEYRALEEEYEGQDEFPEEIDARLGALEVAMEKLEARPLIFDDEEIARAGAFVTLDRYGELAVYRGFVRPEDEPREDADVHIGEHGAGGQGAELSAGSNVDGIGHGTVITSAGQALGANVPDDEDDGALKPLPERLVMELTAHRTLALREAVGRSPDVALTLLLLKLVNDTFRTSSSAGSCLDASVRHVYMSAQASDLKDSVVAKLVDERHAEWEADLPLGNDAALWDYLASLDQVSRLSLLAHCLSFGINALHEKVNPYGAGISASGLTKRMTQSDLVAQAVELDMVEAGWEPTADTYLNRVPKARILEAVREAKGEVTSQLLDHLKKGEMATEAERLLKGSGWLPEVLRRHDLVALDGAEGQGAPEPVSDAEQAEDVDLPAFLTADLPGDDASMMAAE
SIO_010081: C6Y53_RS19830
subclass of: SO_0000673
so part of: C6Y53_RS19830
location: 1994..4162
location: region:1994-4162:1
so has part: feature:1994-4162:1:exon

WP_149615697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1994-4162:1:exon

C6Y53_RS19835
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19835
old locus tag: C6Y53_19930
pseudo: true
so part of: sequence
location: 4262..>4663
location: region:4262-4663:1
so has part: feature:4262-4663:1:exon
subclass of: SO_0000010

position:4262:1
position: 4262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4663:1
position: 4663
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4262-4663:1:exon

C6Y53_RS19835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19835
old locus tag: C6Y53_19930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009827215.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: C6Y53_RS19835
subclass of: SO_0000673
so part of: C6Y53_RS19835
location: 4262..>4663
location: region:4262-4663:1
so has part: feature:4262-4663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4262-4663:1:exon

C6Y53_RS19840
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19840
old locus tag: C6Y53_19935
so part of: sequence
location: 4751..5155
location: region:4751-5155:1
so has part: feature:4751-5155:1:exon
subclass of: SO_0000010

position:4751:1
position: 4751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5155:1
position: 5155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4751-5155:1:exon

C6Y53_RS19840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19840
old locus tag: C6Y53_19935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MQNIVILAGNIGQTPEVRTTQSGTKITNFSLATSRPRLSEGRVMRDENGYRVMDTEWHRITCFNGLGKTVAEHCEKGMKVLVHGRIHYTKWIDSMGNDRYGCEIIAEKVDFLSRPKSAENENPELVDRDDEIPF
SIO_010081: C6Y53_RS19840
subclass of: SO_0000673
so part of: C6Y53_RS19840
location: 4751..5155
location: region:4751-5155:1
so has part: feature:4751-5155:1:exon

WP_008335991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4751-5155:1:exon

C6Y53_RS19845
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19845
old locus tag: C6Y53_19940
so part of: sequence
location: complement(5295..6434)
location: region:5295-6434:-1
so has part: feature:5295-6434:-1:exon
subclass of: SO_0000010

position:5295:-1
position: 5295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6434:-1
position: 6434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5295-6434:-1:exon

C6Y53_RS19845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19845
old locus tag: C6Y53_19940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTENDQLKTLKLLAKRYARATGQPQHVALDFVAARLGFPHWNALTVSAKGEWAPSEAQVAAIKAFVQRITSYEGTTFDHIFGGLDAITRGEVRGHPYELSTMLGDVRMEGDSWRIVLPENPSAAPRVEVDIEHAQNSPMNDRVLLAEAIGIAKELMKSVKARRFADWPRRATKPDAEGKVRHPFLEIEESNLWYCLHCNAEITGPQIAGNQWHCPCCGASPINIFPEAFWLGPNDEKPVPVQSRAERQEIEPIVSIIDPRPRLDLDSDQVTHLIRAALFEDATNASERMGASLAEIWVDDDLDVVVSFEDHYWPEDKELTAAIEVAALLGIEIELEVTWSDPLFAWPGLGTVTQSTAEYTRLMLDAYRSHGATRTKDEI
SIO_010081: C6Y53_RS19845
subclass of: SO_0000673
so part of: C6Y53_RS19845
location: complement(5295..6434)
location: region:5295-6434:-1
so has part: feature:5295-6434:-1:exon

WP_244615042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5295-6434:-1:exon

C6Y53_RS19850
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19850
old locus tag: C6Y53_19945
so part of: sequence
location: 6738..7937
location: region:6738-7937:1
so has part: feature:6738-7937:1:exon
subclass of: SO_0000010

position:6738:1
position: 6738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7937:1
position: 7937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6738-7937:1:exon

C6Y53_RS19850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19850
old locus tag: C6Y53_19945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009827208.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF932 domain-containing protein
translation: MGVVEVLDSVQPTRAGGWKVDVSRGERNGRVSSEWFNRPDDERYLSLDDLWANVKGRSERSRSRVVQTADIRVEAARDSAERLHLVLPKAQEPVAPTHWAFGQLASIVGAPASYLRQLPAPLAGINLQYGLTNHRAEQVKTFETEDGRTELRAVTGPDYGRIHDFELVEAVQRIAGNGTGDTRWKVPGVLDWSTGVYNPDVEISRDTTTLYASDRDVFLFLVDDRNPIEAGKLADGSPDLYFRGFYCWNSEVGAKTLGMASFYLRAVCQNRNLWGVEDFQEIKIRHSKYAALRFAHEAAPALTRFANSSPQGFVNGIRAARQQVVARSDEDRADFLRKRGFSKAESGKIIEKVLMEEGRPPESIFDFVQGITRLARDKTQQDARLDMEGRAKKLLDRVG
SIO_010081: C6Y53_RS19850
subclass of: SO_0000673
so part of: C6Y53_RS19850
location: 6738..7937
location: region:6738-7937:1
so has part: feature:6738-7937:1:exon

WP_149615698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6738-7937:1:exon

C6Y53_RS19855
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
gene: radC
locus tag: C6Y53_RS19855
old locus tag: C6Y53_19950
so part of: sequence
location: 8066..8506
location: region:8066-8506:1
so has part: feature:8066-8506:1:exon
subclass of: SO_0000010

position:8066:1
position: 8066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8506:1
position: 8506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8066-8506:1:exon

C6Y53_RS19855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
gene: radC
locus tag: C6Y53_RS19855
old locus tag: C6Y53_19950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018065906.1
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: MTPQEETVILEAREILGRYLSRNPVIDSWQALLDYCALTVRGPIERFHVLYLDRKNRIISDELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADLSMTKEIQKGCRYLGLTLHDHIIVGAGTELSLGALAKL
SIO_010081: C6Y53_RS19855
subclass of: SO_0000673
so part of: C6Y53_RS19855
location: 8066..8506
location: region:8066-8506:1
so has part: feature:8066-8506:1:exon

WP_149615699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8066-8506:1:exon

C6Y53_RS19860
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19860
old locus tag: C6Y53_19955
so part of: sequence
location: 8617..9135
location: region:8617-9135:1
so has part: feature:8617-9135:1:exon
subclass of: SO_0000010

position:8617:1
position: 8617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9135:1
position: 9135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8617-9135:1:exon

C6Y53_RS19860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19860
old locus tag: C6Y53_19955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010138202.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: MFDLPLQTQPETQKTGLPPSFLTVLADQDLPFALTTACHASAALMSGQAHPKALERFATLAEAMDGAIVHAENVTPEDAPRILAILDREGRLVLAGAVHGGGVAWCHPVSDAAEARAVVSEASQARGQAMRATEWHEHGLARRLRHHADVLDARLVDPLWRVFASRALQIAA
SIO_010081: C6Y53_RS19860
subclass of: SO_0000673
so part of: C6Y53_RS19860
location: 8617..9135
location: region:8617-9135:1
so has part: feature:8617-9135:1:exon

WP_149615700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8617-9135:1:exon

C6Y53_RS19865
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19865
old locus tag: C6Y53_19960
so part of: sequence
location: 9231..9722
location: region:9231-9722:1
so has part: feature:9231-9722:1:exon
subclass of: SO_0000010

position:9231:1
position: 9231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9722:1
position: 9722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9231-9722:1:exon

C6Y53_RS19865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19865
old locus tag: C6Y53_19960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803272.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKIEPTLAAPMAPSRIDFAAVLARQSERDARIAALRPANKERLFDGLTAAGITHVTVSFDGYGDSGQVESIEAYAGDAEVTFPKTQIAYAALTWDDPEVEMRALSLEDVVEQLAYDLLSDTHGGWENNDGAYGEFCFDASARSIHLEFNERFTSSELYTHDF
SIO_010081: C6Y53_RS19865
subclass of: SO_0000673
so part of: C6Y53_RS19865
location: 9231..9722
location: region:9231-9722:1
so has part: feature:9231-9722:1:exon

WP_149615701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9231-9722:1:exon

C6Y53_RS19870
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19870
old locus tag: C6Y53_19965
so part of: sequence
location: 9733..10110
location: region:9733-10110:1
so has part: feature:9733-10110:1:exon
subclass of: SO_0000010

position:9733:1
position: 9733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10110:1
position: 10110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9733-10110:1:exon

C6Y53_RS19870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19870
old locus tag: C6Y53_19965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574197.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAHPYHHALSSVKKWGGTVEDYLAVHSWFDQSKEITADFRHRALRHHAEGIFMAETIFGPTLTLSTGRIIPTRWVGEQHVKEDLGFIPSFADWVKAIRPEPWMGRTERIEAQVDPHLASPVVEVM
SIO_010081: C6Y53_RS19870
subclass of: SO_0000673
so part of: C6Y53_RS19870
location: 9733..10110
location: region:9733-10110:1
so has part: feature:9733-10110:1:exon

WP_149615702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9733-10110:1:exon

C6Y53_RS19875
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19875
old locus tag: C6Y53_19970
so part of: sequence
location: 10112..10309
location: region:10112-10309:1
so has part: feature:10112-10309:1:exon
subclass of: SO_0000010

position:10112:1
position: 10112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10309:1
position: 10309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10112-10309:1:exon

C6Y53_RS19875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19875
old locus tag: C6Y53_19970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574196.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDPTYLSLGLPPTASRLAVVRAAVRALHPDTRAVCSLRLARKRFYWQMLCAHAARQAAGDTPTG
SIO_010081: C6Y53_RS19875
subclass of: SO_0000673
so part of: C6Y53_RS19875
location: 10112..10309
location: region:10112-10309:1
so has part: feature:10112-10309:1:exon

WP_149615703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10112-10309:1:exon

C6Y53_RS19880
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19880
old locus tag: C6Y53_19975
so part of: sequence
location: 10385..10804
location: region:10385-10804:1
so has part: feature:10385-10804:1:exon
subclass of: SO_0000010

position:10385:1
position: 10385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10804:1
position: 10804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10385-10804:1:exon

C6Y53_RS19880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19880
old locus tag: C6Y53_19975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADYFTHFSCLLDVGSPDKAARALALFQEIRAADQDADDPEIAGFDLVLQDAPEGCTLWIHDDDHGDVEAVIRFVLRLAEDLDLTGLWGFQYALTCSRPRLDAFGGGAHVIDLGARKSVGWTSSQEWLAAALNGEDVDA
SIO_010081: C6Y53_RS19880
subclass of: SO_0000673
so part of: C6Y53_RS19880
location: 10385..10804
location: region:10385-10804:1
so has part: feature:10385-10804:1:exon

WP_149615704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10385-10804:1:exon

C6Y53_RS19885
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19885
old locus tag: C6Y53_19980
so part of: sequence
location: 10797..11441
location: region:10797-11441:1
so has part: feature:10797-11441:1:exon
subclass of: SO_0000010

position:10797:1
position: 10797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11441:1
position: 11441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10797-11441:1:exon

C6Y53_RS19885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19885
old locus tag: C6Y53_19980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009450564.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin of toxin-antitoxin stability system
translation: MPEVICTTVYQFPELSDAAKEKARSWYRELGPHDDWWDAVYDDFERVCEILGICLKTTAVRLMGGGARAKPCIWFSGFWSQGDGACFEGYWSHAKGAATRIRDYAPTDTTLHGIADRLQAIQRRNFYQLAAEASHRGRYYHEYTMSIDVTRDSPRWQPPTEDAEELVTEALRDLARWLYRQLEAEYDHLTSDEAIEEGIIVNEYTFTEGGRRFG
SIO_010081: C6Y53_RS19885
subclass of: SO_0000673
so part of: C6Y53_RS19885
location: 10797..11441
location: region:10797-11441:1
so has part: feature:10797-11441:1:exon

WP_149615705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10797-11441:1:exon

C6Y53_RS19890
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19890
old locus tag: C6Y53_19985
so part of: sequence
location: 11507..11908
location: region:11507-11908:1
so has part: feature:11507-11908:1:exon
subclass of: SO_0000010

position:11507:1
position: 11507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11908:1
position: 11908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11507-11908:1:exon

C6Y53_RS19890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19890
old locus tag: C6Y53_19985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020038226.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MbcA/ParS/Xre antitoxin family protein
translation: MEDAMYVAEKIREPAQINAVALKAYARVADAWGLSLKEAAGLADMSESTWKRAKKPDFAGELTKDQLLRLSAVIGIFKSLELYFSEPLAKSWFTRPNKGPLFGGSRPVDTAIDGGLPQILAVRTYLDALRGGA
SIO_010081: C6Y53_RS19890
subclass of: SO_0000673
so part of: C6Y53_RS19890
location: 11507..11908
location: region:11507-11908:1
so has part: feature:11507-11908:1:exon

WP_028095451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11507-11908:1:exon

C6Y53_RS19895
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19895
old locus tag: C6Y53_19990
so part of: sequence
location: 11905..12606
location: region:11905-12606:1
so has part: feature:11905-12606:1:exon
subclass of: SO_0000010

position:11905:1
position: 11905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12606:1
position: 12606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11905-12606:1:exon

C6Y53_RS19895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19895
old locus tag: C6Y53_19990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RES family NAD+ phosphorylase
translation: MKQTEISDRGLVRLLPATYHKPPSLRGLVDTDDEMEILAEIEGLTSGRLQAERGRNPHLDPRELAWQRRSRDLRIYGDSHVNAAFTYTRAGGNRFNAEERGAWYCAWDVMVSVSEVAWHRTRELGFTGSFHDSARYVELLADFIGVFDDMTDEAGHPALHPDPAVGYPEGQSLAQHLRRGGSKGLIYPSVRAPAPGGNCLVCFEPHAIQNVRPGASWDLVWDGTPHYSIAAVG
SIO_010081: C6Y53_RS19895
subclass of: SO_0000673
so part of: C6Y53_RS19895
location: 11905..12606
location: region:11905-12606:1
so has part: feature:11905-12606:1:exon

WP_028095452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11905-12606:1:exon

C6Y53_RS19900
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19900
old locus tag: C6Y53_19995
so part of: sequence
location: 12643..12819
location: region:12643-12819:1
so has part: feature:12643-12819:1:exon
subclass of: SO_0000010

position:12643:1
position: 12643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12819:1
position: 12819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12643-12819:1:exon

C6Y53_RS19900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19900
old locus tag: C6Y53_19995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MATPDIESPDRTDLKQIDHEHFFEAIDSPPLPTEALRSAFHRAKTRSFQRNTGLGSAD
SIO_010081: C6Y53_RS19900
subclass of: SO_0000673
so part of: C6Y53_RS19900
location: 12643..12819
location: region:12643-12819:1
so has part: feature:12643-12819:1:exon

WP_107818284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12643-12819:1:exon

C6Y53_RS19905
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19905
old locus tag: C6Y53_20000
so part of: sequence
location: complement(12902..13819)
location: region:12902-13819:-1
so has part: feature:12902-13819:-1:exon
subclass of: SO_0000010

position:12902:-1
position: 12902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13819:-1
position: 13819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12902-13819:-1:exon

C6Y53_RS19905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19905
old locus tag: C6Y53_20000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MARETYEAQVALLVRILPHVADENVFALKGGTAINLFYRDLPQLSVDIDLTYLPIKDRAESLDEINAAMDRIAAAIETGIRGAKSQRIQGGGGGATRLLARFGNAEIKIETSPVTRGVVHDPEIRTVSAAVEDAYGYAEMQIVSFEDLFAGKLHAALDRQHPRDLYDVTLLYENEGLTQDLFQTFLIYVASSPRPAHELLDPNLIDLEQPYAREFEGMTRAPVPLDTLLATRLKLVADLQSRLDDKARQFLLTLQDGEPDFAAIDRSQAADLPAVKWKLLNLNKLKRDNPEKHAAHRDALLKLLG
SIO_010081: C6Y53_RS19905
subclass of: SO_0000673
so part of: C6Y53_RS19905
location: complement(12902..13819)
location: region:12902-13819:-1
so has part: feature:12902-13819:-1:exon

WP_149615706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12902-13819:-1:exon

C6Y53_RS19910
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19910
old locus tag: C6Y53_20005
so part of: sequence
location: complement(13809..14621)
location: region:13809-14621:-1
so has part: feature:13809-14621:-1:exon
subclass of: SO_0000010

position:13809:-1
position: 13809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14621:-1
position: 14621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13809-14621:-1:exon

C6Y53_RS19910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19910
old locus tag: C6Y53_20005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018065917.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
translation: MDTARSQNLKKVLDAVPAGYLVDAAWLVSQGIAYESFRDYVKRGWLERIARGVFRRPVPNMQASNSIDWKTCILSMQHIMGHDLHVGSTTALGEQGHAHYLRLGESAPVWVYGDKVPNWLIKLPTDAPINIRPRSLFTDQKLGVIEGKTTGQPWDWGLTMSTPERAILEAMDELPHHESFHTLDMVFESLTTLRPRLISDLLQACQKIKVKRLFFVFADRHDHPWRKRIDPQAFDLGSGDRALVRGGKIHPRYRIMVPEDFVKPEAGSGA
SIO_010081: C6Y53_RS19910
subclass of: SO_0000673
so part of: C6Y53_RS19910
location: complement(13809..14621)
location: region:13809-14621:-1
so has part: feature:13809-14621:-1:exon

WP_149615707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13809-14621:-1:exon

C6Y53_RS19915
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19915
old locus tag: C6Y53_20010
so part of: sequence
location: complement(14987..15283)
location: region:14987-15283:-1
so has part: feature:14987-15283:-1:exon
subclass of: SO_0000010

position:14987:-1
position: 14987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15283:-1
position: 15283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14987-15283:-1:exon

C6Y53_RS19915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19915
old locus tag: C6Y53_20010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820102.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESTKHALPATPKQIAYARSLALRNRTLLPWEVQQDRRSLSAWIEAQAQLKPVSDMDRLPTSKQVAFAEKLARIKRRAVPDECFRDKRLMSKWIDGNR
SIO_010081: C6Y53_RS19915
subclass of: SO_0000673
so part of: C6Y53_RS19915
location: complement(14987..15283)
location: region:14987-15283:-1
so has part: feature:14987-15283:-1:exon

WP_149615708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14987-15283:-1:exon

C6Y53_RS19920
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19920
old locus tag: C6Y53_20015
pseudo: true
so part of: sequence
location: 15461..>18073
location: region:15461-18073:1
so has part: feature:15461-18073:1:exon
subclass of: SO_0000010

position:15461:1
position: 15461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18073:1
position: 18073
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15461-18073:1:exon

C6Y53_RS19920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19920
old locus tag: C6Y53_20015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018065919.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: strawberry notch family protein
SIO_010081: C6Y53_RS19920
subclass of: SO_0000673
so part of: C6Y53_RS19920
location: 15461..>18073
location: region:15461-18073:1
so has part: feature:15461-18073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15461-18073:1:exon

C6Y53_RS19925
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19925
old locus tag: C6Y53_20020
so part of: sequence
location: 18219..19745
location: region:18219-19745:1
so has part: feature:18219-19745:1:exon
subclass of: SO_0000010

position:18219:1
position: 18219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19745:1
position: 19745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18219-19745:1:exon

C6Y53_RS19925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19925
old locus tag: C6Y53_20020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187105.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNSPSNSPVGGRAEAEDHTLVRAYFADNPRLSAGALSAARHFLKWARAREISIRDLDASVLDRFLRHRCRCGRYSPAQLRKPVYATDTRRFLSYLEGTGAVTIADDVARLGQYLEAYAGKLSAAGYSKVTYSMRLSQARHFAEWALQMRVSVHNIDDALMDQFAHHDCRCGIRTKRGKRVAGSGPRDRRRGARAFIQFLRDEGLIPAEVLECFVPCDPRLTAFSEWLRRERGVTSETVRRYLNEAGRWLDRLGKTPKDYNAASIRSIVLDQGEERSRSSVRMTVTVLRSFLRFTITKGQCAPSLVHAVPPAVRRRLSTVPRTIPMVKIEEIIASCRTDTSVEIRDRAILLLLARLALRAGDIWQLRLSDIDWRASRLRLHGKGRRGVMMPLPQDAGDALLAYIEDARPVVATDRVFLRTQAPFTPLRSAAEIAGIVSRVLSRGGFTGLPTGSHVFRHSLASAWLRGGADLDQIGVALRHSSRDTTAIYAKVDVGMLTDVAQPWPGCAS
SIO_010081: C6Y53_RS19925
subclass of: SO_0000673
so part of: C6Y53_RS19925
location: 18219..19745
location: region:18219-19745:1
so has part: feature:18219-19745:1:exon

WP_149615622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18219-19745:1:exon

C6Y53_RS19930
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19930
old locus tag: C6Y53_20025
so part of: sequence
location: 19742..20653
location: region:19742-20653:1
so has part: feature:19742-20653:1:exon
subclass of: SO_0000010

position:19742:1
position: 19742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20653:1
position: 20653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19742-20653:1:exon

C6Y53_RS19930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19930
old locus tag: C6Y53_20025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187106.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MIHHHVDRFVQFNRALGMKFAAQERSLRAFADFAAERSITHLTAALILEWAGGAATPYAAQERFDRARALAVFLHAEDMRHEIPAMGLLGRSRRRRPAPHILTQDQIRRIMQEALLVPGLTPISPLTYHNLFGLLASTGLRISEALSLQRGDLTEDGLMIRKGKFGKTRLVPIHASTRAALDRYLEARNSLRKVGDALFVLGHGRPPTATRVHVVFVRIVRKLGYRNPTGPGPRVHDLRHTFAVRSLEACGNNPQAVLRHMKALSTYLGHVDIANTYWYLEATPVLLQMIASTAEETWIGGAT
SIO_010081: C6Y53_RS19930
subclass of: SO_0000673
so part of: C6Y53_RS19930
location: 19742..20653
location: region:19742-20653:1
so has part: feature:19742-20653:1:exon

WP_149615692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19742-20653:1:exon

C6Y53_RS19935
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19935
old locus tag: C6Y53_20030
so part of: sequence
location: 20650..21654
location: region:20650-21654:1
so has part: feature:20650-21654:1:exon
subclass of: SO_0000010

position:20650:1
position: 20650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21654:1
position: 21654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20650-21654:1:exon

C6Y53_RS19935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19935
old locus tag: C6Y53_20030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187107.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTPLAPDLSAFLQTHLPDECGASRHTIAAYARAFALLLRFVAGRLKRTPSELFIEDIDVQMVRAFLEHIEEGRTNSIRSRNARLAAIKSFFRFIEHRHPACLEQAMMIRAMPTKRTDAKLIDYLTKEEVRALLAAPNRHTRGGLRDRAMLHLAYAAGLRASELLAVRMDDFPDGSFSSLRILGKGRRERVLPLWKETQGAIRAWLAVRPGNVGPELFLNRDGRQMTRDGFAYRLRQHVTVAERSAPSIAAKHVTPHVLRHSCAMHTLQATGDIRKVALWLGHASIQTTEMYLRADPTEKLALLEAHHAPLIKPGKFREPSDKLMQILAVAAQRS
SIO_010081: C6Y53_RS19935
subclass of: SO_0000673
so part of: C6Y53_RS19935
location: 20650..21654
location: region:20650-21654:1
so has part: feature:20650-21654:1:exon

WP_149615621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20650-21654:1:exon

C6Y53_RS19940
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19940
old locus tag: C6Y53_20035
so part of: sequence
location: complement(21694..24135)
location: region:21694-24135:-1
so has part: feature:21694-24135:-1:exon
subclass of: SO_0000010

position:21694:-1
position: 21694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24135:-1
position: 24135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21694-24135:-1:exon

C6Y53_RS19940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19940
old locus tag: C6Y53_20035
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007424858.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MADRSDIEAELARVRARLADLDVERTQLQRDVAALEARLAAEHVPAVRQSSFENAPVTNASPSHQKVELFRRLFAGRPDVFPVRWENRRTGRSGYSPACGNEWVKGICGKPKVKCGECPHQKFIPPDEGVIARHLRGDDGRGGDFVAGVYPLLPGDTCWFLAADFDKTSWSEDANALLETCRVKGVPAALERSRSGNGGHVWIFFAEAVSARLARQLGSVLITETMERRPEIGFASYDRLFPNQDIMPLGGFGNLIALPLQNTARKVGNSVFVDADMRPYDDQWAYLSSLPRMTAAAVTNLVEAAELSGRVLGVRMPVEDEQADEPWKMPPSRRSTPRRLEVPIPQTIKVTVADQIYIDRSDLPSAMIAQLVRLAAFQNPEFYRAQAMRLPTFGKPRIVSCAELHPRHVALPRGCFDEVTGFFSDHGATVEVDDLREDGAPLPEIVRFRGELRRQQSQAFDALVEHDTGVLAATTAFGKTVVASALIAHRARNTLVLVHRRELLNQWVERLGSFLQIDPKLIGAIGAGKRKPTGVIDVALIQSLVRKGEVDDIVADYGHLVVDECHHLSAASFELVARRSKARYVTGLSATVARKDGHHPIIFMQCGPVRHQVSAKSQAAESGLRHRARERHTRFRLPEALAMAERPSMPAIYAALAADETRNDLIFDDVLKSLEAKRSPIVLTERKDHLDYLQQRFSRFARNIAVLRGGMSATDRKAAQTALSVADDEERLILATGRYIGEGFDDARLDTLFLTMPIAWKGTLAQYVGRLHRRHDDKKDVLVVDYVDSSVPVLARMAAKRRTGYRALGYVME
SIO_010081: C6Y53_RS19940
subclass of: SO_0000673
so part of: C6Y53_RS19940
location: complement(21694..24135)
location: region:21694-24135:-1
so has part: feature:21694-24135:-1:exon

WP_149615620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21694-24135:-1:exon

C6Y53_RS19945
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19945
old locus tag: C6Y53_20040
pseudo: true
so part of: sequence
location: <24286..26166
location: region:24286-26166:1
so has part: feature:24286-26166:1:exon
subclass of: SO_0000010

position:24286:1
position: 24286
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:26166:1
position: 26166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24286-26166:1:exon

C6Y53_RS19945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19945
old locus tag: C6Y53_20040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574191.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: strawberry notch C-terminal domain-containing protein
SIO_010081: C6Y53_RS19945
subclass of: SO_0000673
so part of: C6Y53_RS19945
location: <24286..26166
location: region:24286-26166:1
so has part: feature:24286-26166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24286-26166:1:exon

C6Y53_RS19950
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19950
old locus tag: C6Y53_20045
so part of: sequence
location: 26170..27201
location: region:26170-27201:1
so has part: feature:26170-27201:1:exon
subclass of: SO_0000010

position:26170:1
position: 26170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27201:1
position: 27201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26170-27201:1:exon

C6Y53_RS19950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19950
old locus tag: C6Y53_20045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008336055.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toprim domain-containing protein
translation: MYSETEDLVRDLAENAEGVCRAYLPAGRREGSYWIVGDLQNNPGRSLFVRLTGPASGPGAAGKFTDGATGEHGDLLDIIRARTGITRFPDLLAEARAHLGRPQPVVPDRQEPRKAKAPGGTPAAAARLFAASNPITGTLAETYLRSRGIAQFGANGALRFHPKCWHREEGQTRSIPRPAMIAAVTDGAGAVQGVHRTWLAPDGQGKAAVNPERRAMGHLLGNAVRLTPHDDILVVGEGIETMLSLSEAAPGLPVWAALSSGHLGAVLLPEGLKRLYVAIDRDPAGQRAAEKLSARASEVGVRVRVLEPRLGDFNDDLRANGKDALRQHLAGQIGPEDRHRLLG
SIO_010081: C6Y53_RS19950
subclass of: SO_0000673
so part of: C6Y53_RS19950
location: 26170..27201
location: region:26170-27201:1
so has part: feature:26170-27201:1:exon

WP_149615709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26170-27201:1:exon

C6Y53_RS19955
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19955
old locus tag: C6Y53_20050
so part of: sequence
location: 27563..28489
location: region:27563-28489:1
so has part: feature:27563-28489:1:exon
subclass of: SO_0000010

position:27563:1
position: 27563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28489:1
position: 28489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27563-28489:1:exon

C6Y53_RS19955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19955
old locus tag: C6Y53_20050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803302.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2493 domain-containing protein
translation: MTIHTHDDAYEPAHSASQTAHALDELQLYGYRPFDEPDPRPMPDGQRLAVADIFDALVATLEDTRMEPDLEEVLWGQVNLFHRAAARIERTLDENEQAQRRLQREQDGSEVKSVELERLTAEGLTLVERRNCMDMMRDHAATEFVHHTGSTWRPRTGSMVNRQHMTAALIDSRDFLAAKRRAENEVMLPAGPKVALTGGTDFNDHRLIWGKLDQVRTKYPDMVLLHGGSPKGAELIAAKWAEARGVTQVAFKPDWTKHAKAAPFKRNDAMLDVLPVGVLVFPGTGIQENLADKAKKLGIPVMKFEKGA
SIO_010081: C6Y53_RS19955
subclass of: SO_0000673
so part of: C6Y53_RS19955
location: 27563..28489
location: region:27563-28489:1
so has part: feature:27563-28489:1:exon

WP_149615710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27563-28489:1:exon

C6Y53_RS19960
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19960
old locus tag: C6Y53_20055
so part of: sequence
location: 28574..28843
location: region:28574-28843:1
so has part: feature:28574-28843:1:exon
subclass of: SO_0000010

position:28574:1
position: 28574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28843:1
position: 28843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28574-28843:1:exon

C6Y53_RS19960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19960
old locus tag: C6Y53_20055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MFDISQQMEVFPTTVDLKRIDPSLNMRRFYRMSVQPDLFGGACLVREWGRIGFRGQMLIEQHPDEGRAVTALMKLAATKKRRGYRLLEG
SIO_010081: C6Y53_RS19960
subclass of: SO_0000673
so part of: C6Y53_RS19960
location: 28574..28843
location: region:28574-28843:1
so has part: feature:28574-28843:1:exon

WP_149615711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28574-28843:1:exon

C6Y53_RS19965
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19965
old locus tag: C6Y53_20060
so part of: sequence
location: 28913..30247
location: region:28913-30247:1
so has part: feature:28913-30247:1:exon
subclass of: SO_0000010

position:28913:1
position: 28913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30247:1
position: 30247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28913-30247:1:exon

C6Y53_RS19965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19965
old locus tag: C6Y53_20060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKVVVPFPKGQRLRSPLAQFFRVGDSHNKFAEMFASGGLPASRVVFDAGRLNRQTALAKELKAEGVEITIDTGAAELSSPARHRTFVRNSAWLTKVPMSPLGPDDYNADVIERIAEMAVAVGADRVLAPSHFLGDPSFDGWLKVDAASCSALRTALDRLGGGRIRIDYPVIQSVQGLVDPTSRKALAETLSILPVDAVWMRLSGLGKEPGPQKVRSLIRMLSGFHNIGKPVILDYCSGLNSEATEAFGVASGSASGILELDQFNARDWHKMPEEPDPDARFARPRIVQVPGLGRGFYANEFELLAKSRGGRKLLLQSEFVTVSSVEEMVRTRKQIQALHLVRSQEALQSVPDLNRAGHFLSKTMADAERRAKDVSFLKPTEAQAQAAGVDLTSLRKRTRAHAETMGKVADALEKLHEERGMESPRARACDFNVDTALRRGDQR
SIO_010081: C6Y53_RS19965
subclass of: SO_0000673
so part of: C6Y53_RS19965
location: 28913..30247
location: region:28913-30247:1
so has part: feature:28913-30247:1:exon

WP_149615712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28913-30247:1:exon

C6Y53_RS19970
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19970
old locus tag: C6Y53_20065
so part of: sequence
location: 30263..30589
location: region:30263-30589:1
so has part: feature:30263-30589:1:exon
subclass of: SO_0000010

position:30263:1
position: 30263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30589:1
position: 30589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30263-30589:1:exon

C6Y53_RS19970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19970
old locus tag: C6Y53_20065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011388540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2384 domain-containing protein
translation: MSRYIGELADIGGLKGTDIANITDVSKATVSRWKAGDIKPQPKNELILSDLYYIVGRLNEYYTPDEVRAWLYARHPQLGGERAMDLIHNDRSLEVLAVIDRLDNDVYV
SIO_010081: C6Y53_RS19970
subclass of: SO_0000673
so part of: C6Y53_RS19970
location: 30263..30589
location: region:30263-30589:1
so has part: feature:30263-30589:1:exon

WP_232786339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30263-30589:1:exon

C6Y53_RS19975
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19975
old locus tag: C6Y53_20070
so part of: sequence
location: 30599..31150
location: region:30599-31150:1
so has part: feature:30599-31150:1:exon
subclass of: SO_0000010

position:30599:1
position: 30599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31150:1
position: 31150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30599-31150:1:exon

C6Y53_RS19975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19975
old locus tag: C6Y53_20070
inference: COORDINATES: protein motif:HMM:NF020387.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RES family NAD+ phosphorylase
translation: MVKARRDNRLIDAIEAIDPVVFEGNVWRLVRDGRDPLICSASGGRWDDGTFDVLYTSLARSGALEEMRFHLMRGQPVMPSKVKYRMFEIELSLGRALQFLDLEALSKVGLNTETFGRLSYEQKNDEYPRTQEIGEVAHFLDFDGLIVPSARAEAKNVVVFCDKVGGLRESTVSDRGMIDWSRE
SIO_010081: C6Y53_RS19975
subclass of: SO_0000673
so part of: C6Y53_RS19975
location: 30599..31150
location: region:30599-31150:1
so has part: feature:30599-31150:1:exon

WP_149615713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30599-31150:1:exon

C6Y53_RS19980
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19980
old locus tag: C6Y53_20075
so part of: sequence
location: complement(31265..35350)
location: region:31265-35350:-1
so has part: feature:31265-35350:-1:exon
subclass of: SO_0000010

position:31265:-1
position: 31265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35350:-1
position: 35350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31265-35350:-1:exon

C6Y53_RS19980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19980
old locus tag: C6Y53_20075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008227318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease
translation: MSSEIASQGSLFTSDFLTETIQGVSEWNTLGNADLDRFETSLRSIFENFPISQTPNESQTEDDLIWPILEALGWTQSLRQQNLSPRGREDVPDGLLFESAETKAKANGFPEEWKRYEFGRAVVESKRWARPLDRRSGRRGEETAPSTQMLRYLRRIDDITNGALRWGILTNGSKWRLYFSGARSVSEQFFELDIAAILDLPRHNEGLFALNEADRRHWLKVFYLVFCREAFEPAGADPRTFHEKALEEGKFYEERVAEDLSNKVFGEVFPDLVRAIVKAAPEADLQGVREAALILLYRLLFILYAEDRDLLPVKDTRYDDYGLRNKVRLDVKERKDNNDVFSDTAARYWGAMADLFLAIDQGDASIGLPPYNGGLFDQGRHAILTNIRIPDAVMARVIDALSFELTPEGRKYINYRNLSVQQLGSIYERLLEYEVTRDGEDITVQPNIFARKGSGSYYTPDDLVQLILTETLEPLVEERKRAFKDKIEELGQGDLPDHRKIGQLKRLDPATALLDLKICDPAMGSGHFLVSLVDFMADQVIAAMAEAELDAPEEWGDYISPLGERIDTIRNTILANADERSWTIDEEQLDDRHIIRRMVLKRCIYGVDKNPMAVELAKVALWLHTFTVGAPLSFLDHHLRCGDSLFGSWVKSGIDKAATYGTPLLLHEPMRRALRAASKMQIVEGLTDAEIAEAHRSADVFAEVQEMTAPLDALLKFIHALEWIGVKDKAGKAALKVFFDGQFGDPLAIAMGKRDPRIKRDADKRFAEILEEARTLIAEENFLNWQVAFPGIWSDWEDDLLNGGFDAIVGNPPWDRIKLQQVEWFAARRPAIARVQRASDRKVLIADLQKAGDPLASEFEKANARAETTSRMARKGGDYPLLSGGDTNFNSLFVERARKIIAPGGIVGLLIPSGIATETSSQEFFSQLIEGHAASCYFDFFNKRASGPLFFPDVYYRFKFSVLVFSGGDKTFDQCRFATFVRDIVELKDPRKVFSMGVDHFKHVNPNSKTAPVYRATRDREISTAIYDRFPVLVDRSSGEEVKAWPVQYATLYHMANSSDQFRTAKELQEKEGAWPESGGVWGSSQGTWVPLYEGKMVQAFDHRASGITTVDANLHRSGQGAATTEEQRHDPNHVIAPRYFVLDPGDLRVELAIKDVTSTTNARSLISCIIPPFGAGHTLPILRIEIEDAKERAEAQAILAASLNSTMVDFVARTKILSNHASWYILEQLPMIPPAEFQSTRFGSKSASQIVCETVLELTYTSHDMAPFARDLGYIDDAGAVRPPFGWDESRRAMLRAKLDALFFILYGLTDRDDVRYVFSTFPIVERQEEEAFGEFRSRELCLAWLNALASGNPDAKIRL
SIO_010081: C6Y53_RS19980
subclass of: SO_0000673
so part of: C6Y53_RS19980
location: complement(31265..35350)
location: region:31265-35350:-1
so has part: feature:31265-35350:-1:exon

WP_149615714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31265-35350:-1:exon

C6Y53_RS19985
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19985
old locus tag: C6Y53_20080
pseudo: true
so part of: sequence
location: complement(35471..>36328)
location: region:35471-36328:-1
so has part: feature:35471-36328:-1:exon
subclass of: SO_0000010

position:35471:-1
position: 35471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36328:-1
position: 36328
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35471-36328:-1:exon

C6Y53_RS19985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19985
old locus tag: C6Y53_20080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009819739.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Fic family protein
SIO_010081: C6Y53_RS19985
subclass of: SO_0000673
so part of: C6Y53_RS19985
location: complement(35471..>36328)
location: region:35471-36328:-1
so has part: feature:35471-36328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35471-36328:-1:exon

C6Y53_RS19990
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19990
old locus tag: C6Y53_20085
so part of: sequence
location: 36391..38454
location: region:36391-38454:1
so has part: feature:36391-38454:1:exon
subclass of: SO_0000010

position:36391:1
position: 36391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38454:1
position: 38454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36391-38454:1:exon

C6Y53_RS19990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19990
old locus tag: C6Y53_20085
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MARRFENQWNERYSPKLGHTSHLLMAFPVGTSGEEVRDITQAVCEKFFQGEGSQFDYIAAIHQDRAHPHAHIVLNRRSKDGEMFFLGKDHHFNYDAFREAMVEAARGHGIRLEATRRLDRGVTTYRAEIDEIYKARDEGRPPVERQRTDADLAAALETVRQNALIYRGLAAEASRSNFEDVAEALERASTILASGGQIQSDGAIYMSQDEAAFDTLITEFSQNIRQIEAAIDRAPAAEKPVIERKLTDVLASVAHLNPLGDRSAALVDAPSRDGIYARPNASEDHLARLDDGEVAPKLAEALQGTGIDAEAVAARLWEGAGNAALERQWLAQDLQAIAKEGGLDLERPADREEALDRLEAVHVRLGDVLTDVRVLRAPTEVDKVDDAEVVLGERLATPGGDLVKDGPDIFAPSERQAFRALVAQFRRTDFDHPFSDDPSVRRAGAVEVEEARAAFDAYAQKSPQHAELASMAWEQITDSRMPPQYAVSAQDRTLHAGDMDLALRDPSDHLGPITEELRTLARYRTEMPDEEFGQAVQDEINHLRSLGASRAYISERSFEIEDQARQDYAERRYLEETAPSVMAFVRNADVEGPLSESEQQDIVRQINERLSPDAIDALRAGNADVLDTFTEDPLRQLELAKTYLQSSEVTAHGPAMERVLDALAEEQIEAQRARHAAADGEKGITHG
SIO_010081: C6Y53_RS19990
subclass of: SO_0000673
so part of: C6Y53_RS19990
location: 36391..38454
location: region:36391-38454:1
so has part: feature:36391-38454:1:exon

WP_244615043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36391-38454:1:exon

C6Y53_RS19995
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS19995
old locus tag: C6Y53_20090
so part of: sequence
location: 38447..40402
location: region:38447-40402:1
so has part: feature:38447-40402:1:exon
subclass of: SO_0000010

position:38447:1
position: 38447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40402:1
position: 40402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38447-40402:1:exon

C6Y53_RS19995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS19995
old locus tag: C6Y53_20090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859685.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MDKGKIALGVLSLVLIGLAMGYVVATGFVMFRYGLSPTRFDVTLLAREYRGLSQSAPKDFLWVNLILGGFGLASLMLSVTLLGDALTRFGTTHWQTRSEMKRNGFFAKPGGGFLLGKLGSPKSKRPFLVSKTFPHALIVAPTGRGKGVGFVIPNLLTYKGSAVVLDVKGENFRETSRFRASTGDKVFRFAPTDWDRPTHRYNPLARIAAMTNPDRQQMELKLTAKLFLQTDNEKLSGLLAGGIDLFVAAGLLAFERGVPTIGEIYRITASGGDKQKEYLKRSQEVKNKSAKLIFERMASTNNDTLTSYLSLLMTSGLDTWDNRAIDAATATSDFSFRDIRRRPHAIYLVVESEMIRPLAPLIRLFFSDLIASLQAQEPGDDEPWPVMIMLDEFDRLGKMPIVAESIKTLRSFGGNLAIVTQTIPALDEIYGENTRRSLQGGAGVKLYLTPSDQKTIEELSQAVGKTTKRVVTRSRAVGRNPFEGRSVSERTEDTPLLTEDEARRMDLDEVILVIDAQMPIRARRVKYFEDPALKVLHAGQSGSFPYPDEDGLRRDRQMSETRETVERLKQELQEVRAAAGPREVGPNAPNAAKTDPVSAAKVRGRAARAAASGGGQGQLALNFEGLGIASADRTMLTSAVQTTRAIIAEHA
SIO_010081: C6Y53_RS19995
subclass of: SO_0000673
so part of: C6Y53_RS19995
location: 38447..40402
location: region:38447-40402:1
so has part: feature:38447-40402:1:exon

WP_149615715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38447-40402:1:exon

C6Y53_RS20000
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20000
old locus tag: C6Y53_20095
so part of: sequence
location: complement(40544..40819)
location: region:40544-40819:-1
so has part: feature:40544-40819:-1:exon
subclass of: SO_0000010

position:40544:-1
position: 40544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40819:-1
position: 40819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40544-40819:-1:exon

C6Y53_RS20000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20000
old locus tag: C6Y53_20095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDENGVLTANRIFPDIIVHERGNNLRNLLVVEVKKSTSAVSDEHDHAKLQALCWQFDYRHGLFLRLSTGPDAQLERVQRNWFEGPAIENP
SIO_010081: C6Y53_RS20000
subclass of: SO_0000673
so part of: C6Y53_RS20000
location: complement(40544..40819)
location: region:40544-40819:-1
so has part: feature:40544-40819:-1:exon

WP_149615716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40544-40819:-1:exon

C6Y53_RS20005
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20005
old locus tag: C6Y53_20100
pseudo: true
so part of: sequence
location: 41339..>41863
location: region:41339-41863:1
so has part: feature:41339-41863:1:exon
subclass of: SO_0000010

position:41339:1
position: 41339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41863:1
position: 41863
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41339-41863:1:exon

C6Y53_RS20005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20005
old locus tag: C6Y53_20100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002718002.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: C6Y53_RS20005
subclass of: SO_0000673
so part of: C6Y53_RS20005
location: 41339..>41863
location: region:41339-41863:1
so has part: feature:41339-41863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41339-41863:1:exon

C6Y53_RS20010
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20010
old locus tag: C6Y53_20105
so part of: sequence
location: 41977..43005
location: region:41977-43005:1
so has part: feature:41977-43005:1:exon
subclass of: SO_0000010

position:41977:1
position: 41977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43005:1
position: 43005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41977-43005:1:exon

C6Y53_RS20010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20010
old locus tag: C6Y53_20105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: Qat anti-phage system QueC-like protein QatC
translation: MLRFLSGDRWRVFFRDRTKRTKTLAVAPKRLAIDGLTKVSLLSGGLDSLIGAVDLLSGGVRPLFVSHYWDSETAKAQAYILERLETQFGKEAFKSLRVRLGFDKHHLTTGETENTQRGRSFLFYSLATLAASAINGRTAVDIPENGLIALNVPLDPLRFGALSTRTAHPHFIASMQRLIDALALDVELNNPYRHMTKGEMVANCADKLFLQKIVANSMSCSSPAKARYKKLSPRHCGYCVPCLIRRASLEVGLDGDDETLYTVEDLKGHILASDQPEGEHVRSFQLMAKRIRAKPDLAKILVHKPGPLHDKPDEIPDYADVFRRGVLEVAELLKGVRARPGG
SIO_010081: C6Y53_RS20010
subclass of: SO_0000673
so part of: C6Y53_RS20010
location: 41977..43005
location: region:41977-43005:1
so has part: feature:41977-43005:1:exon

WP_149615717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41977-43005:1:exon

C6Y53_RS20015
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20015
old locus tag: C6Y53_20110
so part of: sequence
location: 43008..43757
location: region:43008-43757:1
so has part: feature:43008-43757:1:exon
subclass of: SO_0000010

position:43008:1
position: 43008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43757:1
position: 43757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43008-43757:1:exon

C6Y53_RS20015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20015
old locus tag: C6Y53_20110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015599826.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Qat anti-phage system TatD family nuclease QatD
translation: MRPDYVDFHTHLDLYPDLARAIAACDRKRVATLAVTTTPKAFERNVELSADSDFVRVGLGLHPQLVADRHLELDLFEKLLPRTRYVGEIGLDRGPAHYRSFELQQSVFGRILRACAQQGDKILSLHSVRATKPVLDMLDEHLPPDRAGVVLHWFTGSKADVRRAVDRGCYFSVNEGMLASDTGMRVMREIPIDRVLTETDGPFVARGDKPVDPGDVGYTVEVIASTIGLSAEATRMQILLNLKRLLNTG
SIO_010081: C6Y53_RS20015
subclass of: SO_0000673
so part of: C6Y53_RS20015
location: 43008..43757
location: region:43008-43757:1
so has part: feature:43008-43757:1:exon

WP_149615718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43008-43757:1:exon

C6Y53_RS20020
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20020
old locus tag: C6Y53_20115
so part of: sequence
location: complement(43879..44892)
location: region:43879-44892:-1
so has part: feature:43879-44892:-1:exon
subclass of: SO_0000010

position:43879:-1
position: 43879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44892:-1
position: 44892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43879-44892:-1:exon

C6Y53_RS20020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20020
old locus tag: C6Y53_20115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008336079.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MGVVSWMVGTADAFLVDAAESQFGAVASNVGAIVLLMATLSLIGVCINMFFQFRSMDGASFFWYLIKLMLIGLFAFNWANFNAVANAIIGGLDYVAGALISSVGGGGAGATYFAAEFDDLITEFSQYLNAIGSNLNWMTGAILGGIGLVLLSLLGFMTGIVLIFAKMMLTLMLGLAPIMIALSLFDATKDFFHRWVSTTVSYAFYPIVIAAMFSTVVGMANSLLAQLGDPSSATNIGSLVPFFVMVFLAKGFIAATPLIVRGISGNLMVAAAPAVVAGSTGIMRGLFNTAGVKGRSRIGALTTGEVIGRGVTQSPAAIRTASVRLARMAERARRLGA
SIO_010081: C6Y53_RS20020
subclass of: SO_0000673
so part of: C6Y53_RS20020
location: complement(43879..44892)
location: region:43879-44892:-1
so has part: feature:43879-44892:-1:exon

WP_149615719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43879-44892:-1:exon

C6Y53_RS20025
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20025
old locus tag: C6Y53_20120
so part of: sequence
location: complement(44892..45311)
location: region:44892-45311:-1
so has part: feature:44892-45311:-1:exon
subclass of: SO_0000010

position:45311:-1
position: 45311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44892-45311:-1:exon

C6Y53_RS20025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20025
old locus tag: C6Y53_20120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018001740.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKPILALMLAALAGPLVAQTSPQVSNDLTVDMSPQQYRICNERPARPTWMDEIDPREAYKARTMMRLYELRSWQAIKSSGDCGCAIRFPPWDAASAEYEERFATSTQAEHTQARLALRDQQNQIAREVQDICEAQGTW
SIO_010081: C6Y53_RS20025
subclass of: SO_0000673
so part of: C6Y53_RS20025
location: complement(44892..45311)
location: region:44892-45311:-1
so has part: feature:44892-45311:-1:exon

WP_149615720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44892-45311:-1:exon

C6Y53_RS20030
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20030
old locus tag: C6Y53_20125
so part of: sequence
location: complement(45328..46362)
location: region:45328-46362:-1
so has part: feature:45328-46362:-1:exon
subclass of: SO_0000010

position:45328:-1
position: 45328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46362:-1
position: 46362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45328-46362:-1:exon

C6Y53_RS20030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20030
old locus tag: C6Y53_20125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MAASYLEASLDRFGPEVLRDDTIEICINPDGQVWGEFQGDHFMRGLGSPLSQTEIKDLGNQIASAASTTLSTKKPIVSVSILYRDRPIRAQVIQPPAVEGGFSISLRFFSSLPLEAIRLGFLYGKERSLEGLRRERNAALRNVVASGDIDAALRFCVENKLNMIVSGGTSTGKTVAARKILSLIPPEERIITIEEAAELRPEQPNAVTLIADRDTDARSADVLLASTLRMRPDRIVLGEVRGREAMTFLEAINTGHGGSLTTLHAETPQLAVRRLAIAALKTDVPMTYADMIDYIEGSIDVIIQAGRHEGARGITEFFLPGQTRDLNLDMVDGRGNMSPSVAAE
SIO_010081: C6Y53_RS20030
subclass of: SO_0000673
so part of: C6Y53_RS20030
location: complement(45328..46362)
location: region:45328-46362:-1
so has part: feature:45328-46362:-1:exon

WP_149615721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45328-46362:-1:exon

C6Y53_RS20035
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20035
old locus tag: C6Y53_20130
so part of: sequence
location: complement(46364..47689)
location: region:46364-47689:-1
so has part: feature:46364-47689:-1:exon
subclass of: SO_0000010

position:46364:-1
position: 46364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47689:-1
position: 47689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46364-47689:-1:exon

C6Y53_RS20035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20035
old locus tag: C6Y53_20130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008336084.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MTEGTEDLAARLAALEGSTGKEKANKRPAPLAAILGAVGIAAAGGLAWAALQPSAEAPMATAAPEEFQSSGPGFGDLAPISAPEPSQAPPADTGPSESELALMESLATLRAELEELRARPAEAADSGAEQAIADLTAQIATLQEASAEAQRALERQLTERDRELDQLRMDLELARLVPPEPTSLGPSEEELRLAELERRRAAEAEARAERIASPMIAFSGMGAGADRENTLEAARLNADEAFVRSGAQPAQVTRAEVIANPSNTVVQGTMIQAVTETALDSTLPGAIRAIVSEDVHSFDGTRILIPRGARLIGRYRSDVALAQSRVMVAWDRIILPDNQTVQISAFGGDELGRTGTTGFVDTRFAQRFGSAALISLIGALPAAAAGQIDSEAAADVASDVGTDLRDSTQSVMQDYLAIRPVIHVDQGTRITVMVDRDLEIF
SIO_010081: C6Y53_RS20035
subclass of: SO_0000673
so part of: C6Y53_RS20035
location: complement(46364..47689)
location: region:46364-47689:-1
so has part: feature:46364-47689:-1:exon

WP_149615722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46364-47689:-1:exon

C6Y53_RS20040
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20040
old locus tag: C6Y53_20135
so part of: sequence
location: complement(47686..48387)
location: region:47686-48387:-1
so has part: feature:47686-48387:-1:exon
subclass of: SO_0000010

position:47686:-1
position: 47686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48387:-1
position: 48387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47686-48387:-1:exon

C6Y53_RS20040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20040
old locus tag: C6Y53_20135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574160.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MTRTPISALLAASILAFAGTTALAETTPRPGSHDNRVRVATWTEGQVYRVVTTLTRVTTVEFGEGETIRSIIAGDTVGFQFDGVPGGRAFAIKPTASGVATNITVYTNRRSYYFHVVEARQTPHYVVQFRYPENHVQPTRAVAADAPNANYAVSAREEFTPTAIWDDGTFTYFRFARNAPVPAIFRYSNGRERAVNSHTSSDGVIRVSGVNRQWVLRLGEDVVCVQDAGQAAS
SIO_010081: C6Y53_RS20040
subclass of: SO_0000673
so part of: C6Y53_RS20040
location: complement(47686..48387)
location: region:47686-48387:-1
so has part: feature:47686-48387:-1:exon

WP_149615723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47686-48387:-1:exon

C6Y53_RS20045
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20045
old locus tag: C6Y53_20140
so part of: sequence
location: complement(48384..49031)
location: region:48384-49031:-1
so has part: feature:48384-49031:-1:exon
subclass of: SO_0000010

position:48384:-1
position: 48384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49031:-1
position: 49031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48384-49031:-1:exon

C6Y53_RS20045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20045
old locus tag: C6Y53_20140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010139194.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MTARELVEEELVYGALRREQLWRMIGLSGAGFGVFGCLTAAAVALMVETPPPVVVPYDPATGMALPNATVETVSLAERPAVIEAQIYRYILDRETYNQLDNDLRVRRVLAQSSGSAEASMRAMWTSGQESYPPTRYGAAAEMAVEIASITLIGENRAQVRFRKRLTSPQGVQDGSFTATLMFEFRPERTRAIDDVWQNPFGFTVTQYAIRSDRSE
SIO_010081: C6Y53_RS20045
subclass of: SO_0000673
so part of: C6Y53_RS20045
location: complement(48384..49031)
location: region:48384-49031:-1
so has part: feature:48384-49031:-1:exon

WP_149615724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48384-49031:-1:exon

C6Y53_RS20050
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20050
old locus tag: C6Y53_20145
so part of: sequence
location: complement(49046..49843)
location: region:49046-49843:-1
so has part: feature:49046-49843:-1:exon
subclass of: SO_0000010

position:49046:-1
position: 49046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49843:-1
position: 49843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49046-49843:-1:exon

C6Y53_RS20050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20050
old locus tag: C6Y53_20145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010139195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MNLRLPRSLFAGSIALALALNVTGPVAAQGVPTVDTQNIAQEIRQLQQMLQDFGIQTDLLDNALEQLDMLQSQLDQLNEMYASLTGPRSILGLAMGGDLDTLLEANFEDIPGLIRGIQAGDWSALIGPNAGPMRTQMEQALASAGFDEDSLREIATSGNPGAEGVATRATTGAVMSAAAQNSHAEAEQSLERVERLVEMIPDMEDLKASMDHNTRVTAELAIAMTRMWELEAIQTLGAGNAGVVDAATVAEERRYMDFTLPDLEP
SIO_010081: C6Y53_RS20050
subclass of: SO_0000673
so part of: C6Y53_RS20050
location: complement(49046..49843)
location: region:49046-49843:-1
so has part: feature:49046-49843:-1:exon

WP_028095516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49046-49843:-1:exon

C6Y53_RS20055
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20055
old locus tag: C6Y53_20150
so part of: sequence
location: complement(49840..51006)
location: region:49840-51006:-1
so has part: feature:49840-51006:-1:exon
subclass of: SO_0000010

position:49840:-1
position: 49840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51006:-1
position: 51006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49840-51006:-1:exon

C6Y53_RS20055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20055
old locus tag: C6Y53_20150
EC number: 4.2.2.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859624.1
GO function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MRTWLPLSMIGFALAGPTAGPAAAQGVPTFDLRLFAERQAILEQTDRDLALQQVRLSREEELAEIGRQQLASFESLMDAMSLGAGDVAGTVAGLEAGQGAVDDVESAAASLYAPEDTNPAAARMFGDAREGIEELIIRAARDTHGLPGVGRAGLSLVQWRCLLQALIWQESRFQIGARSPVGAFGLTQIMPGTAGDLGIYPAYYDDPYLQVTGGARYLAQMLNMFDGNIIHALAAYNAGPGNVQDYGGVPPFTETQHYVVVIPQQYNSYLAAVGGIDALGTIDPVLLANASFSLSAHGAGVYGDYSLVSVRAAALRVQDIITRIGETEDLHEAIALNTYARAELARLVAIRTRIKAARTEPLSAEQIALAAAQAAERQYMDFSQEDLR
SIO_010081: C6Y53_RS20055
subclass of: SO_0000673
so part of: C6Y53_RS20055
location: complement(49840..51006)
location: region:49840-51006:-1
so has part: feature:49840-51006:-1:exon

WP_149615725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49840-51006:-1:exon

C6Y53_RS20060
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20060
old locus tag: C6Y53_20155
so part of: sequence
location: complement(51011..51226)
location: region:51011-51226:-1
so has part: feature:51011-51226:-1:exon
subclass of: SO_0000010

position:51011:-1
position: 51011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51226:-1
position: 51226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51011-51226:-1:exon

C6Y53_RS20060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20060
old locus tag: C6Y53_20155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859623.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRTIIRSVVLLGLGLTLTACAQHNPPQANCFNFREAPAQAGTATATISTMGAEVTRRDTACDFVLLGAGG
SIO_010081: C6Y53_RS20060
subclass of: SO_0000673
so part of: C6Y53_RS20060
location: complement(51011..51226)
location: region:51011-51226:-1
so has part: feature:51011-51226:-1:exon

WP_028095514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51011-51226:-1:exon

C6Y53_RS20065
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20065
old locus tag: C6Y53_20160
so part of: sequence
location: complement(51223..53607)
location: region:51223-53607:-1
so has part: feature:51223-53607:-1:exon
subclass of: SO_0000010

position:51223:-1
position: 51223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53607:-1
position: 53607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51223-53607:-1:exon

C6Y53_RS20065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20065
old locus tag: C6Y53_20160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein B4
translation: MPRDGLANEVAEALDPLTALPSWVKGEKRLSMMLPYVSLVNDRTIRTRGNELMQCIRLEGVNSTTSEDGHLDRIGGLLAGIVAQVGTEFSFYLHKVSKAVDVTLPPVPGEGFAAAVDKRWHEHLGRAGLRDKTLTLTVLKRPETGSRLPFGLGASRSRHAADTTRRLRKLDEVVGFLLSSFDELKPRLLAASTGELLGFLGSLNTGEEHPLFPRSRLGVIAEDVANTRVTFRGTTIALSDGAVGDKLGAIFAVKNYPAKTDSLMLDELNLPVDMVVTHSFVPINANIMAGRIKRQLRLMQAANDGAVSLAQELELAQDDLESKRLIFGEHHMTVAVYARTQSALDDIAAEIRNISATSGINLISEAFGARAHFMAQHPGNTGARSRKAAITNHNFADLATFHRTPLGKTGREVPWGVPITLFPTPERSGFRFNFHEQGAPDREPTGGHTLILGRPGSGKSVLAAFLMTMARRAGARVFVFDYRAGMEMAVRALGGSYSTVRAGRPTGLNPLQTEIDVRGQAWLADWLASLLERRDRPLTPVQTNRLQEVVRQNASAGHAGLRNWSDFASLLVSTDDEGDLFERMQEWTAEGRYGWIFGANAEDSFSIDGDVAGFDLTDILDSESERERMAVLSYLFRRVERVIEDRKPTIIVIDEAWKALDNAYFAERLSNWLVTARKQNAVVVMMTQYASQLERTRTGKTIVEAVPTQVLLPNIRASAADYAMLGLTEKELDVLLGVGSASRLALVRDDRGSVVIDADLSALGPLVTILGGMEKGEALVGADYRERPDFWRVT
SIO_010081: C6Y53_RS20065
subclass of: SO_0000673
so part of: C6Y53_RS20065
location: complement(51223..53607)
location: region:51223-53607:-1
so has part: feature:51223-53607:-1:exon

WP_149615726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51223-53607:-1:exon

C6Y53_RS20070
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20070
old locus tag: C6Y53_20165
so part of: sequence
location: complement(53597..53875)
location: region:53597-53875:-1
so has part: feature:53597-53875:-1:exon
subclass of: SO_0000010

position:53597:-1
position: 53597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53875:-1
position: 53875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53597-53875:-1:exon

C6Y53_RS20070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20070
old locus tag: C6Y53_20165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MADQSRVFIGLLRPPKLMGLPIMYAMVWLFGSTLLFLWVQSWVVAVFAGLAWPALWKAADWDPNFLDVLVITLQETPPTTNRKLHGGDSYAP
SIO_010081: C6Y53_RS20070
subclass of: SO_0000673
so part of: C6Y53_RS20070
location: complement(53597..53875)
location: region:53597-53875:-1
so has part: feature:53597-53875:-1:exon

WP_009574151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53597-53875:-1:exon

C6Y53_RS20075
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20075
old locus tag: C6Y53_20170
so part of: sequence
location: complement(53897..54151)
location: region:53897-54151:-1
so has part: feature:53897-54151:-1:exon
subclass of: SO_0000010

position:53897:-1
position: 53897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54151:-1
position: 54151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53897-54151:-1:exon

C6Y53_RS20075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20075
old locus tag: C6Y53_20170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859619.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MALIVLAGPALAQSIDLSPVQTLLQGIVDAITGPLGIVIGTLALIGVFLSWLFGILDFRQALWVVVAIAGIAAAPTIVAAIWTT
SIO_010081: C6Y53_RS20075
subclass of: SO_0000673
so part of: C6Y53_RS20075
location: complement(53897..54151)
location: region:53897-54151:-1
so has part: feature:53897-54151:-1:exon

WP_036745219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53897-54151:-1:exon

C6Y53_RS20080
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20080
old locus tag: C6Y53_20175
so part of: sequence
location: complement(54208..54891)
location: region:54208-54891:-1
so has part: feature:54208-54891:-1:exon
subclass of: SO_0000010

position:54208:-1
position: 54208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54891:-1
position: 54891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54208-54891:-1:exon

C6Y53_RS20080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20080
old locus tag: C6Y53_20175
EC number: 4.2.2.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859617.1
GO function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MAASATPRLRSKAADRATALVVALGTGVCSAPPALADGFIFSVGPDGQLISSSQEANGRLFLFAEPRVPDATSETAIQARSAARATPEILHAIETTALRYAGHGALRRAGLSVTDWALLYRANIEVESAYNPAARSPVGAIGLGQLMPDTARDLGVDPHDIAQNLDGSARYLLMMLDQFGEGSLALAAYNAGPEAVARHGGIPPFRETQGHVARVTAVFERLRGDLS
SIO_010081: C6Y53_RS20080
subclass of: SO_0000673
so part of: C6Y53_RS20080
location: complement(54208..54891)
location: region:54208-54891:-1
so has part: feature:54208-54891:-1:exon

WP_149615731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54208-54891:-1:exon

C6Y53_RS20085
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20085
old locus tag: C6Y53_20180
so part of: sequence
location: complement(54848..55174)
location: region:54848-55174:-1
so has part: feature:54848-55174:-1:exon
subclass of: SO_0000010

position:54848:-1
position: 54848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55174:-1
position: 55174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54848-55174:-1:exon

C6Y53_RS20085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20085
old locus tag: C6Y53_20180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010138156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEEAPNVVTEDGLRGLLAEGYLIEVVCKERAEKRHNSWYGSWVIRAVAADGRDDKMLVTSRSVLKLRDFKTIVGLVSFLADMGCTTASIPLEEGGRERHAAPPVKGS
SIO_010081: C6Y53_RS20085
subclass of: SO_0000673
so part of: C6Y53_RS20085
location: complement(54848..55174)
location: region:54848-55174:-1
so has part: feature:54848-55174:-1:exon

WP_127109604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54848-55174:-1:exon

C6Y53_RS20090
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20090
old locus tag: C6Y53_20185
so part of: sequence
location: 55420..55647
location: region:55420-55647:1
so has part: feature:55420-55647:1:exon
subclass of: SO_0000010

position:55420:1
position: 55420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55647:1
position: 55647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55420-55647:1:exon

C6Y53_RS20090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20090
old locus tag: C6Y53_20185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859613.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVAAAADCAPPERPFLPQSREDIREYADLLRSDFEGYIADIQEYFRCLDAERQRAFQEAREVSEDYGKLVELLE
SIO_010081: C6Y53_RS20090
subclass of: SO_0000673
so part of: C6Y53_RS20090
location: 55420..55647
location: region:55420-55647:1
so has part: feature:55420-55647:1:exon

WP_149615732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55420-55647:1:exon

C6Y53_RS20095
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20095
old locus tag: C6Y53_20190
so part of: sequence
location: complement(55662..55982)
location: region:55662-55982:-1
so has part: feature:55662-55982:-1:exon
subclass of: SO_0000010

position:55662:-1
position: 55662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55982:-1
position: 55982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55662-55982:-1:exon

C6Y53_RS20095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20095
old locus tag: C6Y53_20190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008336095.1
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MTIRLSGRARADLEEIRAYTVETWGRDQWLVYYRQLVNAFEQITGDPDRGRDRSLFVPGMRSVNCQRHVIFYKRLDAADGAAVILRIVHQRRNMPALVYYEDLDGG
SIO_010081: C6Y53_RS20095
subclass of: SO_0000673
so part of: C6Y53_RS20095
location: complement(55662..55982)
location: region:55662-55982:-1
so has part: feature:55662-55982:-1:exon

WP_149615727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55662-55982:-1:exon

C6Y53_RS20100
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20100
old locus tag: C6Y53_20195
so part of: sequence
location: complement(55988..56230)
location: region:55988-56230:-1
so has part: feature:55988-56230:-1:exon
subclass of: SO_0000010

position:55988:-1
position: 55988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56230:-1
position: 56230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55988-56230:-1:exon

C6Y53_RS20100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20100
old locus tag: C6Y53_20195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018001728.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MPNVHLTEPMQKYVQAQIESGAYANLSEVVRAGVRMLMEKDGARQFYALKADLEEAASLAENGDFAEFDAHAFEPDAFDR
SIO_010081: C6Y53_RS20100
subclass of: SO_0000673
so part of: C6Y53_RS20100
location: complement(55988..56230)
location: region:55988-56230:-1
so has part: feature:55988-56230:-1:exon

WP_009573607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55988-56230:-1:exon

C6Y53_RS20105
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20105
old locus tag: C6Y53_20200
so part of: sequence
location: 56705..57358
location: region:56705-57358:1
so has part: feature:56705-57358:1:exon
subclass of: SO_0000010

position:56705:1
position: 56705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57358:1
position: 57358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56705-57358:1:exon

C6Y53_RS20105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20105
old locus tag: C6Y53_20200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010398642.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHVIHGVATATAISISGLMASSAPAQAYQVDCAILLCLAGGWPASAPCAHARAVFIRRITPWPIEPPLQIWRCPMGVSFKDPSPMSPMERLYDITFRDPPEPQESTPIPLVRVKADEQADIDISGDAFDFVRSIRVYHIQYRQHENRDGDCNRSDSTRLGSYGVQGDYRWTRSTVGQVPAASGLSIPNGCGSYFYRSVFVDWRDHAGNYGSEEVRY
SIO_010081: C6Y53_RS20105
subclass of: SO_0000673
so part of: C6Y53_RS20105
location: 56705..57358
location: region:56705-57358:1
so has part: feature:56705-57358:1:exon

WP_244615041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56705-57358:1:exon

C6Y53_RS20110
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20110
old locus tag: C6Y53_20205
so part of: sequence
location: 57595..58437
location: region:57595-58437:1
so has part: feature:57595-58437:1:exon
subclass of: SO_0000010

position:57595:1
position: 57595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58437:1
position: 58437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57595-58437:1:exon

C6Y53_RS20110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20110
old locus tag: C6Y53_20205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008336115.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEPTTGLILRRITQTNLSVAAHKLATLILDAIAWKDGYNGLSRGTAAFTLSALAEKMGVSRQYLSVLLSELETSELQLERAKPNGKFAPWIFRFSAFDEESETHDLVSGEGDTSLSRDNNNKTIFSGLIEITASSNVFQTSWAELIKAAKATLPCWNIDTQVIWDRFLAFNRSRGNGKVPAGFLLGFMRRWRNSWGTPTRPAVKPPARPITDPKERELLRQMQAAPTANRQFHASDLCRLIGHAAYEARVLEVIRKFGCQRFSATLAVHGRAVLAGEISR
SIO_010081: C6Y53_RS20110
subclass of: SO_0000673
so part of: C6Y53_RS20110
location: 57595..58437
location: region:57595-58437:1
so has part: feature:57595-58437:1:exon

WP_149615728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57595-58437:1:exon

C6Y53_RS20115
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20115
old locus tag: C6Y53_20210
so part of: sequence
location: complement(58704..58982)
location: region:58704-58982:-1
so has part: feature:58704-58982:-1:exon
subclass of: SO_0000010

position:58704:-1
position: 58704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58982:-1
position: 58982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58704-58982:-1:exon

C6Y53_RS20115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20115
old locus tag: C6Y53_20210
inference: COORDINATES: protein motif:HMM:NF023390.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STAS/SEC14 domain-containing protein
translation: MHALLHERLGTTDNPGLVLDLTSFEGYEEPSAMLEDLKVDTAHANDFGRIAVVGERRWMEWGARVVNLLTGSEMQWFESSDTESAIAWARDG
SIO_010081: C6Y53_RS20115
subclass of: SO_0000673
so part of: C6Y53_RS20115
location: complement(58704..58982)
location: region:58704-58982:-1
so has part: feature:58704-58982:-1:exon

WP_234988885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58704-58982:-1:exon

C6Y53_RS20120
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20120
old locus tag: C6Y53_20215
so part of: sequence
location: complement(59038..60003)
location: region:59038-60003:-1
so has part: feature:59038-60003:-1:exon
subclass of: SO_0000010

position:59038:-1
position: 59038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60003:-1
position: 60003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59038-60003:-1:exon

C6Y53_RS20120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20120
old locus tag: C6Y53_20215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010138164.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MPHDHGHAHIDPDSGDRRVAIAIWANGLLTVAQIVGGILSGSLALIADALHNFSDMASLVIAFAARKIARRPADERMTFGYGRVEIVAALINYTTLIVIGFYLIYEGGMRMIDPPEVMGWTVVILGGIALVVDTLTAMLTYSMQKGSVNIRALFLHNLSDALASVAVIVAGSLIILYDMRWVDPAITIGIATYILYLSFTEIGGPIRTLMLGSPPDIDNEAVVEAMRKVEGVADVHHVHLWQMQEHEAALDCHVVVAAEGWSKIEEIKSAIKERLKEEFGISHSSLEFEHEDRAHQNADLYGHGNASEKEKTNVQGNADRA
SIO_010081: C6Y53_RS20120
subclass of: SO_0000673
so part of: C6Y53_RS20120
location: complement(59038..60003)
location: region:59038-60003:-1
so has part: feature:59038-60003:-1:exon

WP_010138164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59038-60003:-1:exon

C6Y53_RS20125
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20125
old locus tag: C6Y53_20220
so part of: sequence
location: complement(59993..60748)
location: region:59993-60748:-1
so has part: feature:59993-60748:-1:exon
subclass of: SO_0000010

position:59993:-1
position: 59993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60748:-1
position: 60748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59993-60748:-1:exon

C6Y53_RS20125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20125
old locus tag: C6Y53_20220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009815479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglutaminase family protein
translation: MIDPLLVPTKLLDFDAAPLARLIENRSWRGLSEYDRIGAAYDFVRNEIAFGYNRADDIPASEVLSDGYGQCNTKSTLLMALLRGVGIRCRLHGFTIHKGLQRGVVPELVYPLAPQEILHSWVEIEFQGAWINLEGFILDDAFLDVLQTSFSDTESLCGYGAGTDCLGAPPVAWNGEDTYIQKTGIVQDFGVFDTPDAFYFSHEQSFGWLRGALYRHIIRHWMNARVRGFRSDRLKTDRRATHAHEEPANAT
SIO_010081: C6Y53_RS20125
subclass of: SO_0000673
so part of: C6Y53_RS20125
location: complement(59993..60748)
location: region:59993-60748:-1
so has part: feature:59993-60748:-1:exon

WP_026155634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59993-60748:-1:exon

C6Y53_RS20130
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20130
old locus tag: C6Y53_20225
so part of: sequence
location: complement(60844..61422)
location: region:60844-61422:-1
so has part: feature:60844-61422:-1:exon
subclass of: SO_0000010

position:60844:-1
position: 60844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61422:-1
position: 61422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60844-61422:-1:exon

C6Y53_RS20130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20130
old locus tag: C6Y53_20225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009573601.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation transporter
translation: MERRTLWIVLALNIGLAVAFFATGAFGDSSALIANGLDNLSDSFVYAISLFALSRSAKWKRGAANVSGGLLILFAAGILYDAWRRYIGGSDPLGTIMIAMALIAAAINAVCVWLLAKLKNPNVNIRAANTFSYNDFAANLGIVVAGGLVAWLGTNWPDLVVGVIVAGIAAWGGIDILRDAHGEHHKAVHTDK
SIO_010081: C6Y53_RS20130
subclass of: SO_0000673
so part of: C6Y53_RS20130
location: complement(60844..61422)
location: region:60844-61422:-1
so has part: feature:60844-61422:-1:exon

WP_009573601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60844-61422:-1:exon

C6Y53_RS20135
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20135
old locus tag: C6Y53_20230
so part of: sequence
location: complement(61526..61954)
location: region:61526-61954:-1
so has part: feature:61526-61954:-1:exon
subclass of: SO_0000010

position:61526:-1
position: 61526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61954:-1
position: 61954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61526-61954:-1:exon

C6Y53_RS20135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20135
old locus tag: C6Y53_20230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018303599.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MLTIGTLSKKTGTKVQTIRYYEQIGLMPEPGRTEGGQRRYDNAQLDRLSFIRHSRQLGFSLDAIRELLDLSDHPNRPCDEADAIARRQLKQVEQRMARLKALRTELKRMVHECSGGRTGDCKVLEVLRDHSECLTEHEEIGA
SIO_010081: C6Y53_RS20135
subclass of: SO_0000673
so part of: C6Y53_RS20135
location: complement(61526..61954)
location: region:61526-61954:-1
so has part: feature:61526-61954:-1:exon

WP_013959865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61526-61954:-1:exon

C6Y53_RS20140
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20140
old locus tag: C6Y53_20235
so part of: sequence
location: 62162..62728
location: region:62162-62728:1
so has part: feature:62162-62728:1:exon
subclass of: SO_0000010

position:62162:1
position: 62162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62728:1
position: 62728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62162-62728:1:exon

C6Y53_RS20140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20140
old locus tag: C6Y53_20235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009827282.1
GO component: GO:0031966 - mitochondrial membrane [Evidence IEA]
GO process: GO:0033617 - mitochondrial cytochrome c oxidase assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCO family protein
translation: MAGVAALAFVWLLLWSDYRADSARTDAEPPFFAEFELTDHQGMVQTEEDFAGRWMLVFFGFTNCPDVCPTTLSEVAAVMDGLGDDAAKVQPIFITIDPERDTPAALAEYVPLFDAGIIGLTGTPEQIAATSETFPIFFERVEEAAAPDGYTMGHTSHLFLFDPDAGFADSWPYGTSAEEILADLEERF
SIO_010081: C6Y53_RS20140
subclass of: SO_0000673
so part of: C6Y53_RS20140
location: 62162..62728
location: region:62162-62728:1
so has part: feature:62162-62728:1:exon

WP_026155633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62162-62728:1:exon

C6Y53_RS20145
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20145
old locus tag: C6Y53_20240
so part of: sequence
location: 62734..63156
location: region:62734-63156:1
so has part: feature:62734-63156:1:exon
subclass of: SO_0000010

position:62734:1
position: 62734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63156:1
position: 63156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62734-63156:1:exon

C6Y53_RS20145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20145
old locus tag: C6Y53_20240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009815483.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: disulfide bond formation protein B
translation: MNRMSGETALGLAWIIALVASLAVLFVGEVLGQTPCVLCWFQRAFMFPLAIVLGLGLWWRDGRVGRYGIALALGGGAIALWHMGLYVGLVPERVQPCTATGPSCTDDNQLVFGIPIPLMALAAFALIGALSALSLKDTRT
SIO_010081: C6Y53_RS20145
subclass of: SO_0000673
so part of: C6Y53_RS20145
location: 62734..63156
location: region:62734-63156:1
so has part: feature:62734-63156:1:exon

WP_018001722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62734-63156:1:exon

C6Y53_RS20150
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20150
old locus tag: C6Y53_20245
so part of: sequence
location: 63153..63812
location: region:63153-63812:1
so has part: feature:63153-63812:1:exon
subclass of: SO_0000010

position:63153:1
position: 63153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63812:1
position: 63812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63153-63812:1:exon

C6Y53_RS20150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20150
old locus tag: C6Y53_20245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018001721.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin domain-containing protein
translation: MNRRGLILSVLALGAAGFGGATWFAIRPGPVAEAEPVAPELAEAMIRPYSPILGPADAPVTIVEFFDPACEACRAFHPIVKDIMAEHGEAVRVVIRYTPFHGAASEEAIRVLEAARMQDVYVPVLEAVLREQPRWASHGAPAPGLILQIAATAGLDAEAARTQMLAPGVVAILNQDRADVEAVGIRQTPTFFVNGKPLDPFGEAELRRLVAAEVAAAQS
SIO_010081: C6Y53_RS20150
subclass of: SO_0000673
so part of: C6Y53_RS20150
location: 63153..63812
location: region:63153-63812:1
so has part: feature:63153-63812:1:exon

WP_018001721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63153-63812:1:exon

C6Y53_RS20155
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20155
old locus tag: C6Y53_20250
so part of: sequence
location: 63836..64303
location: region:63836-64303:1
so has part: feature:63836-64303:1:exon
subclass of: SO_0000010

position:63836:1
position: 63836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64303:1
position: 64303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63836-64303:1:exon

C6Y53_RS20155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20155
old locus tag: C6Y53_20250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503840.1
GO function: GO:0016531 - copper chaperone activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper chaperone PCu(A)C
translation: MKKYILTGTLAALLTLGGLSVPALAGPEDVVVENAWSRASIGMNRPGAAYMTIRNTGDEPVTLIGLTTPLAMMPEIHETKTNAEGVSSMSPAGEIAIAPGESVALEPGGLHAMLMRLQEPMTEGDTFPLTLLFDDGGEVTVKVPILGIAARGPED
SIO_010081: C6Y53_RS20155
subclass of: SO_0000673
so part of: C6Y53_RS20155
location: 63836..64303
location: region:63836-64303:1
so has part: feature:63836-64303:1:exon

WP_018001720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63836-64303:1:exon

C6Y53_RS20160
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20160
old locus tag: C6Y53_20255
so part of: sequence
location: 64303..64929
location: region:64303-64929:1
so has part: feature:64303-64929:1:exon
subclass of: SO_0000010

position:64929:1
position: 64929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64303-64929:1:exon

C6Y53_RS20160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20160
old locus tag: C6Y53_20255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008889345.1
GO component: GO:0031966 - mitochondrial membrane [Evidence IEA]
GO process: GO:0033617 - mitochondrial cytochrome c oxidase assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCO family protein
translation: MRRRAVLGYGAAGVGAVALMLFVGWWQVDGPGGPEPVGQRPVALTEMDFRLTDHEGNAVGPETLIGRPTMAFFGFTYCPDVCPTTLSDISGWLDDLGDEADEMNVVFITVDPERDTVETMAEYVGYFHPAIRGWTGPEEQIARVADGFRATYERVPAESGDYTMNHTASVFLFAASGRFVTMIDYHEPKEFAVPKIRRALEEEMEGAT
SIO_010081: C6Y53_RS20160
subclass of: SO_0000673
so part of: C6Y53_RS20160
location: 64303..64929
location: region:64303-64929:1
so has part: feature:64303-64929:1:exon

WP_026155632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64303-64929:1:exon

C6Y53_RS20165
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20165
old locus tag: C6Y53_20260
so part of: sequence
location: 64926..66299
location: region:64926-66299:1
so has part: feature:64926-66299:1:exon
subclass of: SO_0000010

position:64926:1
position: 64926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66299:1
position: 66299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64926-66299:1:exon

C6Y53_RS20165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20165
old locus tag: C6Y53_20260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807977.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MRLRTLAACVAIAGTVSGAAIAISDSMSKEPVPPELAQAGSWMPQGPEAPQNVDIPVTLPAAAWADDAPDLSPLPLLQAAFADRPVQAIEPPLSTWSRDIAPGETLDFLLSEAGLAAPDRAEVALALGAEYDLRRLRPGHSVTVASTVDGSPRTVSLAVEDGVRIEVVFGEQMSTQVVAPDPEIVTLAGEAMIDSSIFAALDEAGIPARFSVDLAQMLGGTVDFRREMAGGETLRLLWREARVGEDRIGQPELAFAALEIGGSLYEIVWPDDGSGQATIYVDGEVLRVFAQPVEGARLSSVFGRRTHPVFGNVRMHTGVDFAAARGTPVQATAPGRVNFIGWRGGYGRVVEILHGSDTMTRYAHLSAVPEDLAQGQRVAAGDVIGRVGATGTATGPNLHYEVLVDGRPTDPLSDDRLAEAAESDADDTAALSRLAEARALLNENLGSEIAKTTTERL
SIO_010081: C6Y53_RS20165
subclass of: SO_0000673
so part of: C6Y53_RS20165
location: 64926..66299
location: region:64926-66299:1
so has part: feature:64926-66299:1:exon

WP_026155631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64926-66299:1:exon

C6Y53_RS20170
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20170
old locus tag: C6Y53_20265
so part of: sequence
location: 66303..66758
location: region:66303-66758:1
so has part: feature:66303-66758:1:exon
subclass of: SO_0000010

position:66303:1
position: 66303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66758:1
position: 66758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66303-66758:1:exon

C6Y53_RS20170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20170
old locus tag: C6Y53_20265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013959872.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF411 domain-containing protein
translation: MKRMTQVLAITLALFPAAQALAEATAIDVRKTNGCGCCLSWMKHLEENGFVPTGQDMFGGLLVRFKLDNGVPQRMVSCHTALIDGYVIEGHVPAADIRRLLEERPDAVGLAVPGMPYGSPGMGPEDDREAYDVFLIRKDGSTEVFSSYAEG
SIO_010081: C6Y53_RS20170
subclass of: SO_0000673
so part of: C6Y53_RS20170
location: 66303..66758
location: region:66303-66758:1
so has part: feature:66303-66758:1:exon

WP_018001717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66303-66758:1:exon

C6Y53_RS20175
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20175
old locus tag: C6Y53_20270
so part of: sequence
location: 66771..67553
location: region:66771-67553:1
so has part: feature:66771-67553:1:exon
subclass of: SO_0000010

position:66771:1
position: 66771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67553:1
position: 67553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66771-67553:1:exon

C6Y53_RS20175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20175
old locus tag: C6Y53_20270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803463.1
GO function: GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0030001 - metal ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ZIP family metal transporter
translation: MENLSPIMLGFLGSLAAGSLTAVGAVPVLFGRIPSRATRDLSLGFAAGVMLAASFFSLIIPALDAAEPMFENGAMPAAIVCVSILLGMGAVALMNEKLPHEHFKTGREGPEAASLRRVWLFIIAITIHNFPEGLAVGVGFGSGGMEGGLPLAIGIGLQNAPEGLAVAVSLLGEGYPKLRAWGIAALTGMIEPIGGLLGAGIITLSEPLLPWGLAFAAGAMLYVISHEIIPETHRSGHQNRATLGLAVGLVLMLFLDVWLG
SIO_010081: C6Y53_RS20175
subclass of: SO_0000673
so part of: C6Y53_RS20175
location: 66771..67553
location: region:66771-67553:1
so has part: feature:66771-67553:1:exon

WP_026155630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66771-67553:1:exon

C6Y53_RS20180
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
gene: lspA
locus tag: C6Y53_RS20180
old locus tag: C6Y53_20275
so part of: sequence
location: 67582..68040
location: region:67582-68040:1
so has part: feature:67582-68040:1:exon
subclass of: SO_0000010

position:67582:1
position: 67582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68040:1
position: 68040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67582-68040:1:exon

C6Y53_RS20180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
gene: lspA
locus tag: C6Y53_RS20180
old locus tag: C6Y53_20275
EC number: 3.4.23.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009573591.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MIGVFAALAAFAIDQITKAIVVANAVTLSAGIPVFPGFNLVFYRNDGVTFGMLGGAPWWSLIAFALAICVWLGVMLFRADNAVETLAYGAIIGGALGNVIDRVRYRAVTDFLDFYIGTTHWPAFNLADVFVVSGVGLLLAAPWISARRSIKS
SIO_010081: C6Y53_RS20180
subclass of: SO_0000673
so part of: C6Y53_RS20180
location: 67582..68040
location: region:67582-68040:1
so has part: feature:67582-68040:1:exon

WP_018001715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67582-68040:1:exon

C6Y53_RS20185
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
gene: lnt
locus tag: C6Y53_RS20185
old locus tag: C6Y53_20280
so part of: sequence
location: 68007..69584
location: region:68007-69584:1
so has part: feature:68007-69584:1:exon
subclass of: SO_0000010

position:68007:1
position: 68007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69584:1
position: 69584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68007-69584:1:exon

C6Y53_RS20185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
gene: lnt
locus tag: C6Y53_RS20185
old locus tag: C6Y53_20280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009573590.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: apolipoprotein N-acyltransferase
translation: MDQRAAFDQVVKPEILNRIALRHRLLSRMTLGFAAGAMTVLTFPPLSILLLVPVAYSALFVGLRDLSFGRAFLVGWAFGLGQFGFGIWWIAESFYVEAERFGTMAIPAVAGLSAGLAIFPAIAAALFAEIARRGAMGSLLACLLFATSWTVAEWLRGHVLTGFPWNLAGYALVDYAALRQTAAWVGSYGLSFLTVFVAVLPGAAAMASGRQRLTISLMALAGIATMWAVGTLRLQSDAQQPPGVDLRIVQGNIPQEEKWAPENREATFARYLELSTRPGDFDVLLWPETAFPGFLDEDTEARARIAAALPDGRVLLTGVPDRVPSEDGTRYFNTVQAFDETGEILTGYAKHHLVPFGEYVPFRGWLPIERLTAGLGDFTPGPGPRTLALPGVPLVAVAICYEIIFPGHVVDDLFRPDWIFNATNDAWFGTSIGPEQHLASARMRAVEEGLPVIRAANTGISAVIDASGEIVARLDTGETGIIDASLPSARPPTLYASFGDWMLLALILASWSWAMAPMRRLTTAA
SIO_010081: C6Y53_RS20185
subclass of: SO_0000673
so part of: C6Y53_RS20185
location: 68007..69584
location: region:68007-69584:1
so has part: feature:68007-69584:1:exon

WP_018001714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68007-69584:1:exon

C6Y53_RS20190
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20190
old locus tag: C6Y53_20285
so part of: sequence
location: complement(69594..70106)
location: region:69594-70106:-1
so has part: feature:69594-70106:-1:exon
subclass of: SO_0000010

position:69594:-1
position: 69594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70106:-1
position: 70106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69594-70106:-1:exon

C6Y53_RS20190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20190
old locus tag: C6Y53_20285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008889351.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L,D-transpeptidase family protein
translation: MKTIRFPRRAVLLGGLVAFLSGCASKFRSYDGPEVTRVRLYKGQRLLVLDGADRVLQTYPVGLGFAPEGHKQFEGDGRTPEGVYTIDRRNPNSTYHLSIGISYPNEADIAFAEAQGLSPGGDIFIHGGPRPGIDPTNVRDWTAGCIAVTDREIEDIYAMVKDGTPIHIFA
SIO_010081: C6Y53_RS20190
subclass of: SO_0000673
so part of: C6Y53_RS20190
location: complement(69594..70106)
location: region:69594-70106:-1
so has part: feature:69594-70106:-1:exon

WP_018001713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69594-70106:-1:exon

C6Y53_RS20195
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20195
old locus tag: C6Y53_20290
so part of: sequence
location: complement(70170..72524)
location: region:70170-72524:-1
so has part: feature:70170-72524:-1:exon
subclass of: SO_0000010

position:70170:-1
position: 70170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72524:-1
position: 72524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70170-72524:-1:exon

C6Y53_RS20195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20195
old locus tag: C6Y53_20290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation-translocating P-type ATPase
translation: MPPDTHRHDHDHAEDAQTSGGSCCGSAGTCGDIVPATPAPAGGRSFQVSGLDCAEEVAILNKVVGPKIGGAEHLAFDVINGRMTILDSAKSLSDGEIAELVASTGMTAKPWDAENASVDQAAHLARQRLFTALSGGFWAAGFLWHIIETGMGGALGLFAGHGEAPMPLVEAGLFAVAILFGVWLVAPKAWSSARRLSPDMNLLMVVAVAGAIGLGEFFEAATVAFFFSLSLYLESWSVGRARNAVSALLDLAPPTARVLHDDGSEADVPASAVAINARFIVRGGDRIPLDGEVVDGAGAVDQAPITGESALVPKERGDEVYAGTINGEGTLTVRATKAASDTVLAKIIRMVGDAHARRAPVEQWVAKFARIYTPIVMALAIAIALLPPLIFGGAWDYWFYNALVLLVIACPCALVISTPVSIVAALTASARAGVLIKGGAYVEAPGKTTALAMDKTGTITMGEPEVAAVHPLGKASAQDLMTLAAGLEARSSHPLARAILARAEADGIKVSAAEDTRTVPGRGLEGRTDGRSIWLGSDRFAEEKGFGDAIPKDLRDRIEGAGSTLVAVGDDTGVTGILELRDRIRPDAKGIVAQLHAQGVKTIVMLTGDNERTARAVAAEVGIDEVRAELLPEDKVTAIEELVETHDMVAMIGDGVNDAPAMARAHYAIAMGAVGSDAAIETADIALMTDDLGKVPWLIGHSRRTMSIIHQNIGISLATKGVFVVATAFGLASMWGAIAADVGVSLLVVANALRLLNSQEAKAPPSGGEQVGPQMAKAALAHGH
SIO_010081: C6Y53_RS20195
subclass of: SO_0000673
so part of: C6Y53_RS20195
location: complement(70170..72524)
location: region:70170-72524:-1
so has part: feature:70170-72524:-1:exon

WP_018001712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70170-72524:-1:exon

C6Y53_RS20200
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20200
old locus tag: C6Y53_20295
so part of: sequence
location: 72707..72991
location: region:72707-72991:1
so has part: feature:72707-72991:1:exon
subclass of: SO_0000010

position:72707:1
position: 72707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72991:1
position: 72991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72707-72991:1:exon

C6Y53_RS20200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20200
old locus tag: C6Y53_20295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009815498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVLMLKQKIIVAVALSLTAGCAIQPTGPGDSADRRGKVPEAVIAMAAPDQDVATARLVPEDGCYWYKHSGPVETTLLPLRTANGNRICTPRET
SIO_010081: C6Y53_RS20200
subclass of: SO_0000673
so part of: C6Y53_RS20200
location: 72707..72991
location: region:72707-72991:1
so has part: feature:72707-72991:1:exon

WP_038068706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72707-72991:1:exon

C6Y53_RS20205
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20205
old locus tag: C6Y53_20300
so part of: sequence
location: complement(73017..73682)
location: region:73017-73682:-1
so has part: feature:73017-73682:-1:exon
subclass of: SO_0000010

position:73017:-1
position: 73017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73682:-1
position: 73682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73017-73682:-1:exon

C6Y53_RS20205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20205
old locus tag: C6Y53_20300
EC number: 2.3.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503854.1
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
GO process: GO:0018104 - peptidoglycan-protein cross-linking [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L,D-transpeptidase
translation: MLTRRHFIQTTTALFSVTGPGMAFADTWPTEAQKAEWDAQVTPQGYVAETSNPWGLHPRFLPQRVVAKAGLVPGDIHVDAVARYLYHIEEGGTAMRYGVAIARGNLYEPGVYTIKRKVRWPHWQPTQSMINRDPELYADIADGMEPGPENALGSRALYLYVGDRDTLLRIHGTPSPRSIGGRASSGCVRMVMAHINDLYPNVETGSTAYLYSAEDSVTARS
SIO_010081: C6Y53_RS20205
subclass of: SO_0000673
so part of: C6Y53_RS20205
location: complement(73017..73682)
location: region:73017-73682:-1
so has part: feature:73017-73682:-1:exon

WP_026155629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73017-73682:-1:exon

C6Y53_RS21340
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS21340
pseudo: true
so part of: sequence
location: <73931..>74038
location: region:73931-74038:1
so has part: feature:73931-74038:1:exon
subclass of: SO_0000010

position:73931:1
position: 73931
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:74038:1
position: 74038
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73931-74038:1:exon

C6Y53_RS21340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS21340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011102826.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: C6Y53_RS21340
subclass of: SO_0000673
so part of: C6Y53_RS21340
location: <73931..>74038
location: region:73931-74038:1
so has part: feature:73931-74038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73931-74038:1:exon

C6Y53_RS20210
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20210
old locus tag: C6Y53_20305
so part of: sequence
location: complement(74214..75284)
location: region:74214-75284:-1
so has part: feature:74214-75284:-1:exon
subclass of: SO_0000010

position:74214:-1
position: 74214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75284:-1
position: 75284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74214-75284:-1:exon

C6Y53_RS20210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20210
old locus tag: C6Y53_20305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTRASILTDGYDDPLITTEEDAEAHEKDLWFLPGPFEEEPDDLPPGPRAEPPDTAVIEDWAKAEGVHAARLAKVAGRLGALDDRLLRGPEGWRHRLALVEAAALSWVAGDRVSTDRLALWVSMRLSGAQDDPNALARVGWAVRRLTGGPGPMADLAAFLDRRDPENIEDSAERFEDRAGGWLDVMAAAKGLHPITRACMGYHLWSLAGLGRHGDQIEAAVTASRIATSDGSGAIFAPLAMAGAGGLRVSGLPPERLARWLDGMNSAILTAMRTLDDIEVWIGRAENVMAQLSGRTPVALRKVFTEWPLVSAPMAEAMTGASRAAVQRNLAWMEASGLIREVTGNGRYRMWKADLI
SIO_010081: C6Y53_RS20210
subclass of: SO_0000673
so part of: C6Y53_RS20210
location: complement(74214..75284)
location: region:74214-75284:-1
so has part: feature:74214-75284:-1:exon

WP_038068700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74214-75284:-1:exon

C6Y53_RS20215
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
locus tag: C6Y53_RS20215
old locus tag: C6Y53_20310
so part of: sequence
location: 75511..76392
location: region:75511-76392:1
so has part: feature:75511-76392:1:exon
subclass of: SO_0000010

position:75511:1
position: 75511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76392:1
position: 76392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75511-76392:1:exon

C6Y53_RS20215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
locus tag: C6Y53_RS20215
old locus tag: C6Y53_20310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010138187.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPLIGYARVSTEDQTPLPQSEALQSAGCAEIFEEHASGGNRARPVLARVLERIGKGDTLVVVRIDRLARSLSHLLEVIERLEGKGAFFRSLQDPIDTASPQGKFTLQVLGAAAEFERALIRERTKAGLASARSKGRVGGNPGLRAKDPEALRKVRLARQDGYMERLNETAQDWVPHVRRLRPDMAWEDVLRIINGPLPHDRRWTQSRLLRAVKAYVADGFLPAEVLGRAGRRETDDRLPAIVAAIKGADPEITLQAICDRLESMRERTPRGRTSWQPSSVRMLLERAEKLGLL
SIO_010081: C6Y53_RS20215
subclass of: SO_0000673
so part of: C6Y53_RS20215
location: 75511..76392
location: region:75511-76392:1
so has part: feature:75511-76392:1:exon

WP_071974352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75511-76392:1:exon

C6Y53_RS20220
type: Gene
subclass of: SO_0000704
RO_0002162: 2605946
gene: repA
locus tag: C6Y53_RS20220
old locus tag: C6Y53_20315
so part of: sequence
location: 76527..77720
location: region:76527-77720:1
so has part: feature:76527-77720:1:exon
subclass of: SO_0000010

position:76527:1
position: 76527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77720:1
position: 77720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76527-77720:1:exon

C6Y53_RS20220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2605946
gene: repA
locus tag: C6Y53_RS20220
old locus tag: C6Y53_20315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009827042.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MSEVEQDLDIAIGHYAELLASNLHAQRAAHFPPDAKKVMRTLTSGEAAELLGVDHTYLRKLHREGKIVDVETTAGSHRRYTLDDIWEIRQTLEGNAKKSGTYVPGRRDGDELQVVSVVNFKGGSGKTTTSAHLAQRLALKGYRVLAIDLDPQASLSALHGIQPELDLMEGGTLYDAVRYDDPVPIAEVIRKTYIRGLDLIPGNLELMEFEHETPAAIQRGGAKAFFARVHDALDSVEANYDVVVIDCPPQLGFLTMSALSASSGVLVTVHPQMLDLMSMSQFLRMTADLLGVIRDAGANLRFDWLRFLPTRYKVGDAPQTEVIAFIRGLFGRSVLTNHMVESTAISDAGLTKQTLYEADKKDFTRQTFDRAIESMNAVNDEIAEIIQNTWGRNGKKA
SIO_010081: C6Y53_RS20220
subclass of: SO_0000673
so part of: C6Y53_RS20220
location: 76527..77720
location: region:76527-77720:1
so has part: feature:76527-77720:1:exon

WP_043754416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76527-77720:1:exon