Paraburkholderia dioscoreae strain Msb3 plasmid pIII.
type: Entry
definition: Paraburkholderia dioscoreae strain Msb3 plasmid pIII.
sequence version: NZ_LR699557.1
sequence date: 2022-12-12
sequence: sequence
division: CON
label: NZ_LR699557.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA5871251
keyword: RefSeq
source: Paraburkholderia dioscoreae
organism: Paraburkholderia dioscoreae
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR699557.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/12/2022 08:12:22\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,542\nCDSs (total) :: 7,456\nGenes (coding) :: 7,321\nCDSs (with protein) :: 7,321\nGenes (RNA) :: 86\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 64\nncRNAs :: 4\nPseudo Genes (total) :: 135\nCDSs (without protein) :: 135\nPseudo Genes (ambiguous residues) :: 0 of 135\nPseudo Genes (frameshifted) :: 55 of 135\nPseudo Genes (incomplete) :: 108 of 135\nPseudo Genes (internal stop) :: 11 of 135\nPseudo Genes (multiple problems) :: 34 of 135\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 64284
topology: linear
so has quality: SO_0000987
location: 1..64284
location: region:1-64284:1
RO_0002162: 2604047

NZ_LR699557
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA5871251
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Herpell B, J.
journal: Submitted (18-AUG-2019) UNIVERSITY OF VIENNA, Department of Ecogenomics and Systems Biology, UZA I, Althanstrasse 14, 1090 Vienna, Austria

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64284:1
position: 64284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-64284:1:source
so part of: sequence
organism: Paraburkholderia dioscoreae
mol type: genomic DNA
strain: Msb3
isolation source: leaf
type material: type strain of Paraburkholderia dioscoreae
plasmid: pIII

2604047
type: Taxonomy
SIO_000068: taxonomy

PDMSB3_RS37250
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37250
so part of: sequence
location: complement(<1..1639)
location: region:1-1639:-1
so has part: feature:1-1639:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1639:-1
position: 1639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1639:-1:exon

PDMSB3_RS37250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585041.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC family ATPase
translation: MRPLKLTLEGFYGVRDGMRRESFTLDLESLPEGLIALVGPNGAGKTTIMDNLHPYPIMPSHASMLSVDAFSYWDHICGTSALKELEWEHDGIRYRSTFSFRKPGKTGKAEYYLAWHGSDGTWHPVTLPDGTVSDGKAATYNRCVEAINGSLQSFFTSVFSAQNRRPLASYGAGEIKTLLAEMLGIEHLKALSAKAGDVAKILGRALDEIQTDLTALAGKRQRKADVERSVLAQGELLRDTRAQRDLKLEEAAKLTQERATLAAKAGESATVEARLRELSVRAHELVKGVQSLDGDEQAASVRTQQRVNSLKQAVVTHQATLARKEAILGAAAKRDEAQLLIGREEAKLEPLQRMIADLEAKQVSHATLQTAISGLMTQGQTKAAHFETLTKQAAVVDQVPCVGHAMHATCPLLSQALQAKSQAEEQRVSVAELRAQYREKKAQADLLAPVVAELAAKRSELNTVARTLTDARRDLQAATELAASKPLLDAAATGLETANAELGGVANEAAARSARYESERARMTAEMTRIQQESKQLAAVDVTAAI
SIO_010081: PDMSB3_RS37250
subclass of: SO_0000673
so part of: PDMSB3_RS37250
location: complement(<1..1639)
location: region:1-1639:-1
so has part: feature:1-1639:-1:exon

WP_165190313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1639:-1:exon

PDMSB3_RS37255
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37255
old locus tag: PDMSB3_0001
so part of: sequence
location: complement(1627..2160)
location: region:1627-2160:-1
so has part: feature:1627-2160:-1:exon
subclass of: SO_0000010

position:1627:-1
position: 1627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2160:-1
position: 2160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1627-2160:-1:exon

PDMSB3_RS37255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37255
old locus tag: PDMSB3_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585043.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGLYPAGSDWARIFANDDQDIRDVQKSLVEHAGFSAAILHQPFGKDRGAVLAQSGQMLVLSATTAGASQVVVTPAVEMQHLLWSYHTGMATQWSPMEIRTLTGYAGWDELLTCARREFARACEKVEAAIAGKLRAPMAVAERVDPMVESFPHDDDVAFYSRMAAMSEAAEVSPCAL
SIO_010081: PDMSB3_RS37255
subclass of: SO_0000673
so part of: PDMSB3_RS37255
location: complement(1627..2160)
location: region:1627-2160:-1
so has part: feature:1627-2160:-1:exon

WP_165190314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1627-2160:-1:exon

PDMSB3_RS37260
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37260
old locus tag: PDMSB3_0002
so part of: sequence
location: complement(2380..3777)
location: region:2380-3777:-1
so has part: feature:2380-3777:-1:exon
subclass of: SO_0000010

position:2380:-1
position: 2380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3777:-1
position: 3777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2380-3777:-1:exon

PDMSB3_RS37260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37260
old locus tag: PDMSB3_0002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343256.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphatase family protein
translation: MKIAHMSDLHYSPENLDEADRCFSFAVRDAMNRCMDVAVISGDSTDHRLDAHAPALNRLAWNINHLSLSMPVLMLQGTFSHEPPGTLRNFALMGTNHPVFIAERVQQVSLLEGKFFGSAGPVFNEEELHSVLTLGADVVFTCLPSINKGQLAAAVGAKDAATGLEAVLGDYLAAAGRVNAQLRAAGIRTVGVSHGTVNGCTTEHGVTMAGFDHEFSLGALFEAECDAFMLGHIHKSQQWERGGRVVAYAGSPGRFHYGEEGDKGYLAWDVETGSARALLVPTPARETICVDFDGPPDMERLAAIAADAGDKFVRVRWQVDEEHRQSVDRDAIEALFAGASALKLEPRILPVTRSRSQGISIEPTVDRKIERWAEHANVEAAPIVERYRLLEAGYAEAIAAAVLAGLAGEDVGAAVAQPVPEPVSSSGQLPVDIPLEPESDTVPDATVEVLPAAQMSWLEDDLFAA
SIO_010081: PDMSB3_RS37260
subclass of: SO_0000673
so part of: PDMSB3_RS37260
location: complement(2380..3777)
location: region:2380-3777:-1
so has part: feature:2380-3777:-1:exon

WP_197740330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2380-3777:-1:exon

PDMSB3_RS37265
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37265
old locus tag: PDMSB3_0003
so part of: sequence
location: complement(3857..4339)
location: region:3857-4339:-1
so has part: feature:3857-4339:-1:exon
subclass of: SO_0000010

position:3857:-1
position: 3857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4339:-1
position: 4339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3857-4339:-1:exon

PDMSB3_RS37265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37265
old locus tag: PDMSB3_0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADAR family protein
translation: MRKIANFTLFFGEQDALSNWHRCQFAYHDVNFTSVEQFMMFSKAKLFGDEAAAEAILAARHPKDQKAIGRGVKGFDLAAWEAKRESIVYVGCREKFAQNPGLRSLLLATAPTELVEASPYDRIWGVGLGERDPLILDKANWRGTNLLGVTLMKVRDTLSG
SIO_010081: PDMSB3_RS37265
subclass of: SO_0000673
so part of: PDMSB3_RS37265
location: complement(3857..4339)
location: region:3857-4339:-1
so has part: feature:3857-4339:-1:exon

WP_165190315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3857-4339:-1:exon

PDMSB3_RS37270
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37270
old locus tag: PDMSB3_0004
so part of: sequence
location: complement(4351..4560)
location: region:4351-4560:-1
so has part: feature:4351-4560:-1:exon
subclass of: SO_0000010

position:4351:-1
position: 4351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4560:-1
position: 4560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4351-4560:-1:exon

PDMSB3_RS37270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37270
old locus tag: PDMSB3_0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011831589.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNDLGTLTGLQQMRCGGCGGDLFKVFTADRTQRIVVQCQQCMSTSFIEPEPAKLQINWGEGDGCMTVF
SIO_010081: PDMSB3_RS37270
subclass of: SO_0000673
so part of: PDMSB3_RS37270
location: complement(4351..4560)
location: region:4351-4560:-1
so has part: feature:4351-4560:-1:exon

WP_088177004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4351-4560:-1:exon

PDMSB3_RS37275
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37275
old locus tag: PDMSB3_0005
so part of: sequence
location: complement(4726..6054)
location: region:4726-6054:-1
so has part: feature:4726-6054:-1:exon
subclass of: SO_0000010

position:4726:-1
position: 4726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6054:-1
position: 6054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4726-6054:-1:exon

PDMSB3_RS37275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37275
old locus tag: PDMSB3_0005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585048.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAVVQMFDNAPRSLVEERAIRPPVIGKIRPGIKVLTRAAQGNPKAVEMYNAMVAAGDSYETIGKVIETKLKLRNALIPRNVAHFTCRRSDFSNPDTADEILRLYGADRGDGVKLHRFPVMFAFDDWLRNVPNQMAAYTTTGRQYFSEYGRDGKRYCKTYAPVERDERAKRVRRSFGGRLVIQRQDDDIPDGLCDPHVCPQYQDRKCNLSANFVFAIPDVKGLGLIELPTNSIYVLQKAYSAMQTVSLARGRLTGTRFWLSKKEFDITRIDENGQAVRQKQMLTVLDADIDLGALLDAGDEPQPALDAANRAVALIEAAGNVEVLPQTFGEADVGEPETGGPMHGETDSAGGADVEGGGTAGRPEPDETLEDKRHRMSDLLNRLGMSQPDRQQDFRRYAHVTFGRGWAERPADVDQMNARLTAALDDPVAFDDDIKQANSYV
SIO_010081: PDMSB3_RS37275
subclass of: SO_0000673
so part of: PDMSB3_RS37275
location: complement(4726..6054)
location: region:4726-6054:-1
so has part: feature:4726-6054:-1:exon

WP_165190316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4726-6054:-1:exon

PDMSB3_RS37280
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37280
old locus tag: PDMSB3_0006
so part of: sequence
location: complement(6051..6317)
location: region:6051-6317:-1
so has part: feature:6051-6317:-1:exon
subclass of: SO_0000010

position:6051:-1
position: 6051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6317:-1
position: 6317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6051-6317:-1:exon

PDMSB3_RS37280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37280
old locus tag: PDMSB3_0006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018432949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLHDRLNERIAEAIKLQLDNERGALDTTSDAWRSRCEVAKVAMFSDAERSVFIHHVSERRGNVAAREMESQATTLRTNAIFFLARKPS
SIO_010081: PDMSB3_RS37280
subclass of: SO_0000673
so part of: PDMSB3_RS37280
location: complement(6051..6317)
location: region:6051-6317:-1
so has part: feature:6051-6317:-1:exon

WP_165190415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6051-6317:-1:exon

PDMSB3_RS37285
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37285
old locus tag: PDMSB3_0008
so part of: sequence
location: 6979..7584
location: region:6979-7584:1
so has part: feature:6979-7584:1:exon
subclass of: SO_0000010

position:6979:1
position: 6979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7584:1
position: 7584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6979-7584:1:exon

PDMSB3_RS37285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37285
old locus tag: PDMSB3_0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1845 domain-containing protein
translation: MSGFETEKPEAADPERLIAPSAAAQTGAGGLRPIKRLTSDDRLARIHPETLAKTELLYYSDFARTFVRSDYNFCAAKMTVARGGKLLALEAEFHTAEAFFRKALAWANKLHGRSTGLEPERVTLEIKHPMSGRLVRLLTIYDQLFSKTMEALVGRSVMAHDRKSALDAAAARIKQIPILCMPDNDRYTPEGVLLPDHDDTH
SIO_010081: PDMSB3_RS37285
subclass of: SO_0000673
so part of: PDMSB3_RS37285
location: 6979..7584
location: region:6979-7584:1
so has part: feature:6979-7584:1:exon

WP_128589943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6979-7584:1:exon

PDMSB3_RS37290
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37290
old locus tag: PDMSB3_0009
so part of: sequence
location: 7679..8584
location: region:7679-8584:1
so has part: feature:7679-8584:1:exon
subclass of: SO_0000010

position:7679:1
position: 7679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8584:1
position: 8584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7679-8584:1:exon

PDMSB3_RS37290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37290
old locus tag: PDMSB3_0009
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIREIQRLHAQFAPDSMVIDLPRQIAALPAPGDHSESDPSRAMHARMAGVAPRARQGAIGLAIAAMVAMSGMGAASLYRNFQAGHHSASTVSTAPEQKSDASPQTTEKPAFQEVDATPAHPVSAAPTLSASDFASAGSLGLTADQFRNSLRSPARAGQPVTSPSAPALSSEAQLAAVSPIHRAGASREAAAAATQPTPRADPAPAQAVVVAKPAPAAQTKAQSAQAAQVTQPPAAAAQAPAPMAQPAQPAQPVQPAEAAKPARAAHRHISRPRAEQNAESNSDAKPSAESRAGSTEVKMF
SIO_010081: PDMSB3_RS37290
subclass of: SO_0000673
so part of: PDMSB3_RS37290
location: 7679..8584
location: region:7679-8584:1
so has part: feature:7679-8584:1:exon

WP_165190317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7679-8584:1:exon

PDMSB3_RS37295
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37295
old locus tag: PDMSB3_0010
so part of: sequence
location: 8596..9048
location: region:8596-9048:1
so has part: feature:8596-9048:1:exon
subclass of: SO_0000010

position:8596:1
position: 8596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9048:1
position: 9048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8596-9048:1:exon

PDMSB3_RS37295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37295
old locus tag: PDMSB3_0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polymer-forming cytoskeletal protein
translation: MKNELSITLVSAGCTISGDMIVDHGVSYFGLLDGGLISTQGLLHVGDGGLIKGNVQGDHVRIDGRVDGNVHARGTLEINGHVSGDIMYCGTIRLGPRAALNGTLKRVARMLTVEPEASESANPVLAATSPAAAAPERPESNVTEFSRAKA
SIO_010081: PDMSB3_RS37295
subclass of: SO_0000673
so part of: PDMSB3_RS37295
location: 8596..9048
location: region:8596-9048:1
so has part: feature:8596-9048:1:exon

WP_165190318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8596-9048:1:exon

PDMSB3_RS37300
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37300
old locus tag: PDMSB3_0011
so part of: sequence
location: 9124..9630
location: region:9124-9630:1
so has part: feature:9124-9630:1:exon
subclass of: SO_0000010

position:9124:1
position: 9124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9630:1
position: 9630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9124-9630:1:exon

PDMSB3_RS37300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37300
old locus tag: PDMSB3_0011
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTLALLLTAFATSAFAQGIADPIPTNSPAIGQRTQTLTLQDSEHSVPAQVFYQVTLSWGGHIVKSLTILTDDRKQATAATEEELPYLSACDAASCSAGELHSGFMLSVTPAVAADGSILTFYKMVISAALPAETTDTSSGAFHLSQGQAMTIPLNGLLLTIKARVV
SIO_010081: PDMSB3_RS37300
subclass of: SO_0000673
so part of: PDMSB3_RS37300
location: 9124..9630
location: region:9124-9630:1
so has part: feature:9124-9630:1:exon

WP_165190319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9124-9630:1:exon

PDMSB3_RS37305
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37305
old locus tag: PDMSB3_0012
so part of: sequence
location: 9696..10121
location: region:9696-10121:1
so has part: feature:9696-10121:1:exon
subclass of: SO_0000010

position:9696:1
position: 9696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10121:1
position: 10121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9696-10121:1:exon

PDMSB3_RS37305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37305
old locus tag: PDMSB3_0012
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVKDAITWVAVAVSIAMPFTVINMVEAYLENGSALTRASLIEVDMVRLSQLSGDVRSLPAPDGSLLLTRHGLSSSEALQQRIKLAQTTFAQTRADVENTARRVWRNTAIGFFCVAISSWLAVTLAIVLPRKRADGSAAAA
SIO_010081: PDMSB3_RS37305
subclass of: SO_0000673
so part of: PDMSB3_RS37305
location: 9696..10121
location: region:9696-10121:1
so has part: feature:9696-10121:1:exon

WP_165190320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9696-10121:1:exon

PDMSB3_RS37310
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37310
old locus tag: PDMSB3_0013
so part of: sequence
location: 10141..10350
location: region:10141-10350:1
so has part: feature:10141-10350:1:exon
subclass of: SO_0000010

position:10141:1
position: 10141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10350:1
position: 10350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10141-10350:1:exon

PDMSB3_RS37310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37310
old locus tag: PDMSB3_0013
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYHTRDWEAAAQEAAFDGLCFCMLSDGRFINRQAMPDETPHRSRFALASDFFEQHIALITPVPHPSRI
SIO_010081: PDMSB3_RS37310
subclass of: SO_0000673
so part of: PDMSB3_RS37310
location: 10141..10350
location: region:10141-10350:1
so has part: feature:10141-10350:1:exon

WP_165190321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10141-10350:1:exon

PDMSB3_RS37315
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37315
old locus tag: PDMSB3_0014
so part of: sequence
location: 10390..10899
location: region:10390-10899:1
so has part: feature:10390-10899:1:exon
subclass of: SO_0000010

position:10390:1
position: 10390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10899:1
position: 10899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10390-10899:1:exon

PDMSB3_RS37315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37315
old locus tag: PDMSB3_0014
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQFVRKTLFATAVAASLIASAHGATTVQTLDITWYKDGQVIDSGRHIINDDTGPAPYLNRSGKEVGYAVCSGTAGAMRLSAEKKFVGRSLLIEPVSVNSGKVRLSVSAIDTVLDGIRKVGTADCTSEVVDVHGYTASDLPVELADGQTVEVPMKNPQYRLVLNLHRDAL
SIO_010081: PDMSB3_RS37315
subclass of: SO_0000673
so part of: PDMSB3_RS37315
location: 10390..10899
location: region:10390-10899:1
so has part: feature:10390-10899:1:exon

WP_165190322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10390-10899:1:exon

PDMSB3_RS37320
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37320
old locus tag: PDMSB3_0018
so part of: sequence
location: complement(11774..12928)
location: region:11774-12928:-1
so has part: feature:11774-12928:-1:exon
subclass of: SO_0000010

position:11774:-1
position: 11774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12928:-1
position: 12928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11774-12928:-1:exon

PDMSB3_RS37320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37320
old locus tag: PDMSB3_0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015004435.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MGNDQGYQSGTDEIVLAVSLELAAKKWKVALHDGRRERPAVHTVDQPQAAARLQAVLALIDQHRERWSLPAGVRIVVCYEAGQDAFWIWRALQAHSIECYVVDPASIPVQRHKRRAKTDRLDAIKLVVNLRAWLHGERDRMHVVHVPSAQDEASRHLMRERGQLQKEELQHLDRMRKLLATLGCWEDVTHRAFADRLARDEVRCHDGTPLPPELRERLLRECERRAFVAQQLAVLEKTRQASVPAPSRARSDALARLKGVGEVSASRLALELYWRDFHNRRQVGACVGLVPQPYDSGESQTDQGISKQGNRRVRALLVEIAWTWLRYQPGSALTQWFNRRTQGTGPNRRARRIAIVAVARRLAIALWRYLKDGVIPEGAQLKPA
SIO_010081: PDMSB3_RS37320
subclass of: SO_0000673
so part of: PDMSB3_RS37320
location: complement(11774..12928)
location: region:11774-12928:-1
so has part: feature:11774-12928:-1:exon

WP_197740331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11774-12928:-1:exon

PDMSB3_RS37325
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37325
old locus tag: PDMSB3_0019
so part of: sequence
location: 13056..13676
location: region:13056-13676:1
so has part: feature:13056-13676:1:exon
subclass of: SO_0000010

position:13056:1
position: 13056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13676:1
position: 13676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13056-13676:1:exon

PDMSB3_RS37325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37325
old locus tag: PDMSB3_0019
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGAFRVVVGMWISPDLAAVRRVSADSPIVDHGSFDAAAIGQALDEFNPCGERIRIRFADDTVDLATARARIDGTLLGPPDCRDFAQAVLTAAGRSRGPVIKVREQWSTLPSRKVQQATAAPPSLLLFALYGTFYSTMIWLQQFQMRLRIRAAEPMNFMLDGPGKADLQGTLPRELSDLFEAHFGFAYRPDCLVARLAHSRLPDWMQ
SIO_010081: PDMSB3_RS37325
subclass of: SO_0000673
so part of: PDMSB3_RS37325
location: 13056..13676
location: region:13056-13676:1
so has part: feature:13056-13676:1:exon

WP_165190324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13056-13676:1:exon

PDMSB3_RS37330
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37330
old locus tag: PDMSB3_0020
so part of: sequence
location: complement(13723..15447)
location: region:13723-15447:-1
so has part: feature:13723-15447:-1:exon
subclass of: SO_0000010

position:13723:-1
position: 13723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15447:-1
position: 15447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13723-15447:-1:exon

PDMSB3_RS37330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37330
old locus tag: PDMSB3_0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018310256.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent helicase
translation: MLDELNPQQREVAQLRQNCVAIACPGAGKTKTIATKAALLLQEGAAVVGAVTFSKDAAVELRERILTVAGKAVKKRLIAGTFHSLAYKQLQRLGGRSLDIASDGDRLGLLIRVMQDLGLEGKAEDVIPTIEKIKTNFGRCDVNSADGQLYSAYQEALARNGKIDFQDMLRLAVEGMQNGTILPYPFAYLLVDEFQDTDPLQYRWIELHAKAGSIVTVVGDDDQSIYAFREALGYRGMESFIKEFEAKPVVLGSNYRCRAEILAAADRVIRNNPDRIPKVLRAEKGVGGRVEASRHADEYMEAEAAIEALAPLLRNGKTCAVLARTNRILDPLEAVCRSYGVKYHRASGASVLNRPEGALLCNLLEIIEGVKATGLDAVLAHSGLHADHLRALHASMGAELVQKPRAELVELGMPEDVATNYREFMKRLAEWRGLCERKFYSLVLSGVNEWLLKYTKKENGIRTIQATYDVLSRLNGTFAERLLFLRQDNNEPAPDALVLTTMHSSKGLEWDHVWIARSEDTIVPDAKSTEPEERRLFYVAMTRARETLMISGTSKNFASRFVTEAQIETAAHLA
SIO_010081: PDMSB3_RS37330
subclass of: SO_0000673
so part of: PDMSB3_RS37330
location: complement(13723..15447)
location: region:13723-15447:-1
so has part: feature:13723-15447:-1:exon

WP_165190325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13723-15447:-1:exon

PDMSB3_RS37335
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37335
old locus tag: PDMSB3_0021
so part of: sequence
location: complement(15457..16326)
location: region:15457-16326:-1
so has part: feature:15457-16326:-1:exon
subclass of: SO_0000010

position:15457:-1
position: 15457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16326:-1
position: 16326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15457-16326:-1:exon

PDMSB3_RS37335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37335
old locus tag: PDMSB3_0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase
translation: MSTVAETELDKAETAGALAASDASVHAQASHADHEPRLDGAEEGEGEIERELSQMEADADRLQKEGVISPDDANMKRAEVAKTRKAFRDLPASERISIIKRRREIGRQLMERQLSGAAVVAAQVRLNHTRLKPLFEQWWPYLNRMSVNMQRFGDSTFGADDKNAVNSFFEKQIKSIEEYVDEAVRVAGGYREQKEAELRDAGEFVFEPTIPMPALDMQVEVYSRFSMRVLTAIMKFDRAMDHFDFMVWNGIRDQSDVDDETVRFLKKVNPLGVRGYMTHLRLMTTVRGL
SIO_010081: PDMSB3_RS37335
subclass of: SO_0000673
so part of: PDMSB3_RS37335
location: complement(15457..16326)
location: region:15457-16326:-1
so has part: feature:15457-16326:-1:exon

WP_165190326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15457-16326:-1:exon

PDMSB3_RS37340
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37340
old locus tag: PDMSB3_0022
so part of: sequence
location: complement(16611..17225)
location: region:16611-17225:-1
so has part: feature:16611-17225:-1:exon
subclass of: SO_0000010

position:16611:-1
position: 16611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17225:-1
position: 17225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16611-17225:-1:exon

PDMSB3_RS37340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37340
old locus tag: PDMSB3_0022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4400 domain-containing protein
translation: MASRFGSHLKVWFLLVPVLSIAVMPAIPDRKLFEVPDVETESLVASVGQDRADAAVRAANELFKRSFVDNGLLHRTLAASSNVGGLNDGGMSTFAHTWTENFWLLAYRAMFRAMVMKMWIVGTLCFALGMFIDGTARRKIKAAAAGFVSPLSFHLAGHGLLIVTGTLFGVLLVPVPVLAGYWLVVAALLGALLWKAAESFQSAR
SIO_010081: PDMSB3_RS37340
subclass of: SO_0000673
so part of: PDMSB3_RS37340
location: complement(16611..17225)
location: region:16611-17225:-1
so has part: feature:16611-17225:-1:exon

WP_165190327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16611-17225:-1:exon

PDMSB3_RS37345
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37345
old locus tag: PDMSB3_0023
so part of: sequence
location: complement(17218..17469)
location: region:17218-17469:-1
so has part: feature:17218-17469:-1:exon
subclass of: SO_0000010

position:17218:-1
position: 17218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17469:-1
position: 17469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17218-17469:-1:exon

PDMSB3_RS37345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37345
old locus tag: PDMSB3_0023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343225.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLTVTIIAKLSRVDSDMARRALNTASAFDEPDATPPEEFTWGAGARCYALASIAVNRPQLFWGGMLAITAIPLLAVVRLIHG
SIO_010081: PDMSB3_RS37345
subclass of: SO_0000673
so part of: PDMSB3_RS37345
location: complement(17218..17469)
location: region:17218-17469:-1
so has part: feature:17218-17469:-1:exon

WP_232064489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17218-17469:-1:exon

PDMSB3_RS37350
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37350
old locus tag: PDMSB3_0024
so part of: sequence
location: complement(17426..17944)
location: region:17426-17944:-1
so has part: feature:17426-17944:-1:exon
subclass of: SO_0000010

position:17426:-1
position: 17426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17944:-1
position: 17944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17426-17944:-1:exon

PDMSB3_RS37350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37350
old locus tag: PDMSB3_0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAVFKNIIRDHKLSHKLIPVFNVAPDLELACSRVADFIGERFVGDSGPLAAEMIESALASFKRAKRTGDQHVAFMQGLFEPAKSLYARRYVARRGDKVSVWSPMLEPIPAFEERHQNSELEMVDERCPEHITERTAAFQLASRVLQGEAFRRYFEEYDVAHRYDNSEVVAG
SIO_010081: PDMSB3_RS37350
subclass of: SO_0000673
so part of: PDMSB3_RS37350
location: complement(17426..17944)
location: region:17426-17944:-1
so has part: feature:17426-17944:-1:exon

WP_090812843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17426-17944:-1:exon

PDMSB3_RS37355
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: traD
locus tag: PDMSB3_RS37355
old locus tag: PDMSB3_0025
so part of: sequence
location: complement(17955..19826)
location: region:17955-19826:-1
so has part: feature:17955-19826:-1:exon
subclass of: SO_0000010

position:17955:-1
position: 17955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19826:-1
position: 19826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17955-19826:-1:exon

PDMSB3_RS37355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: traD
locus tag: PDMSB3_RS37355
old locus tag: PDMSB3_0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585069.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Members of this protein family are the putative conjugative coupling factor, TraD, as the term is used for the SXT and TOL plasmid systems; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer system coupling protein TraD
translation: MNYINHFRPIYEFRPLIVWPVAIVGIFVSGMPYGWAFALACFAMLAVRAVQVWRALSFRMAISTKWLSKIHIGKLLELQRKMREREDSMYLGTGFEWTQKHTQIAHDILRMPVTDIPSLPKWLNKTDLGRKTEARIERLFAPNDSIRDRMPQGSSWIHGMEPKKVRVPFHYKAMGGHTLVGGTTGAGKTRTYEVISTQVIHNPKDVLIIVDPKNDDEWKKRVEKECARAGRKFLYFNQAKPHESIRLNPLENWSQPSEIPSRIAQLMEEGPFRDFAFLFIDRAVKGELYVGDKPNLRSILKYAQSGIGTLLDRSLRRFFLENGLPNWEELTVAQTVKDSVRKNDVSLVDGMAKLYMDRFAAHDRGHETIDGLIATHTHDREHYMRIIASALPLLQMLATGETGLMLAPKADDFEDEREIWDIDKIIKQKAVLYMGLDSLSNNIVQKAIASMALSDVAAVCGSIYNFYAEKPDVVLIIDEIAEAINEQVIQILNKGRGAGFKAFVAFQARADLEAKLGNAAKMLQVLGNLNNQVILRLEDSDTAKWFSDKVGETAIRVVNISNSTNTTTESHAMEFSGSQSRTLQLEKVPLIPMPLIHRLPNLQYFMRISGGAVYQGRIPIIEG
SIO_010081: PDMSB3_RS37355
subclass of: SO_0000673
so part of: PDMSB3_RS37355
location: complement(17955..19826)
location: region:17955-19826:-1
so has part: feature:17955-19826:-1:exon

WP_165190328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17955-19826:-1:exon

PDMSB3_RS37360
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37360
old locus tag: PDMSB3_0026
so part of: sequence
location: complement(19823..21178)
location: region:19823-21178:-1
so has part: feature:19823-21178:-1:exon
subclass of: SO_0000010

position:19823:-1
position: 19823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21178:-1
position: 21178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19823-21178:-1:exon

PDMSB3_RS37360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37360
old locus tag: PDMSB3_0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011875538.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraI domain-containing protein
translation: MTASHRPAVVNDLLNTHAKRIELVRQCANESTEAEFERKWLSVLRRCAAWFSSMPLTPELHAEPGGAFRATIESTFYAMRLAGGQKFAADMTSDKRRRLEPQYIYAVFLAAASSSLDEPCRHFEFVRVADRTPWSPAAHGAFGNWIGDGDYVVHRRPAPLKGERMRTAMFAQTVITPELLSGLDNAVLADLFGAINPEKSPQGFEALVHKVVRQAMDVSVEFERKAQRGVFAPVKFDVPSAVHVALELQPQVAPVAAPPDQAGAAVATSAAAAEVATSPGAQPAASPPAPAAAPASGAVPGGPQLSQSLLDALERSEAQAATAAATGPVEPAVTAAPAVDPSRMAGGTPSAARQTRTGPTEEELTEILGPGSAMLREFFRALAGDVAAGKAKVTWEEKGLAVQKRLIGGYGITSDTLVEQLRKRTLLLRAAGNDICIVERAGRLIMERPAA
SIO_010081: PDMSB3_RS37360
subclass of: SO_0000673
so part of: PDMSB3_RS37360
location: complement(19823..21178)
location: region:19823-21178:-1
so has part: feature:19823-21178:-1:exon

WP_165190329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19823-21178:-1:exon

PDMSB3_RS37365
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37365
old locus tag: PDMSB3_0027
so part of: sequence
location: complement(21175..22221)
location: region:21175-22221:-1
so has part: feature:21175-22221:-1:exon
subclass of: SO_0000010

position:21175:-1
position: 21175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22221:-1
position: 22221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21175-22221:-1:exon

PDMSB3_RS37365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37365
old locus tag: PDMSB3_0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585071.1
GO process: GO:0030255 - protein secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MAIFSLKRLRWLSVMVCLLVTTLAEPAAFADDNMTLPDGSTLSTGSPATGSSTSAKPLTSADGDFGKGSTDAVSQIQTLLGGIIPAAVTASASVMDEANKFAWGLGVISLVLLGVRFSGTHHPISAWVNLFEEVAVLGIFVALYLGYSTSAAGFWTWFEQLATHISGGSSNSIPAQMATLAGTMFDAVKTRFVSIKLLTDLTGTVVDAIGLFLAFVVVLIASIVFAYYSAVGQIQAAVGIVLGPIAIALGFSSYTRNYFMKWLDWMIHSGMYIVMVAVLIRLMGANIATAVQKATNVSGATSTGAYAFDLAVFILLLSFEIPKLAGMFGSGAGATGTGALKLARSFIP
SIO_010081: PDMSB3_RS37365
subclass of: SO_0000673
so part of: PDMSB3_RS37365
location: complement(21175..22221)
location: region:21175-22221:-1
so has part: feature:21175-22221:-1:exon

WP_165190331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21175-22221:-1:exon

PDMSB3_RS37370
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37370
old locus tag: PDMSB3_0028
so part of: sequence
location: complement(22225..22992)
location: region:22225-22992:-1
so has part: feature:22225-22992:-1:exon
subclass of: SO_0000010

position:22225:-1
position: 22225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22992:-1
position: 22992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22225-22992:-1:exon

PDMSB3_RS37370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37370
old locus tag: PDMSB3_0028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585072.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion protein
translation: MIKTLLRTATATAALTLGLMSQAYAQLAVIDPTNLIQNTMTAIGAVKGEVYQDTNLVYQYQMMLNQLKQATNLNPSAMLAQATSITNDITSLTKYTDTLKSLYGGLQSNAEYATKVQALITQSGKTPAQWFSDQSTLISNNDQTAKQMFQMGNDVISHVSTLAKRRQEIQDQLNMSPTAEATAQLTTHLLDIVASQNSDMLQMMASKQQADSVTKAQTASSDQANNTARSALQAQLDQQRATYNATIGSSKVLGQ
SIO_010081: PDMSB3_RS37370
subclass of: SO_0000673
so part of: PDMSB3_RS37370
location: complement(22225..22992)
location: region:22225-22992:-1
so has part: feature:22225-22992:-1:exon

WP_165190333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22225-22992:-1:exon

PDMSB3_RS37375
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37375
old locus tag: PDMSB3_0029
so part of: sequence
location: complement(23022..25484)
location: region:23022-25484:-1
so has part: feature:23022-25484:-1:exon
subclass of: SO_0000010

position:23022:-1
position: 23022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25484:-1
position: 25484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23022-25484:-1:exon

PDMSB3_RS37375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37375
old locus tag: PDMSB3_0029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585074.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion system protein
translation: MLIGTFSKRAVQEIAPWMTLVTPELVLDKDGSLVTVFEFDGIDADTPNPGDITAARDNLDHACRNFDHRVTAWWRVSHRRIRGGVEGEFVNEADARVDAINQENIGSGKYFRNSHSLALAFTPETGLSRVFDKIGYHMTVGGKNVAVAMFEAAKDMLLARSAFVFDLTKLQNEIKRFEAVIDGFTGGVTRLKMKRLQLQNALSFLHQRANPGTPKRRMRYPVTMLDTHLTETQVTIGAEQLMFESAHGKVYARIIGVKEWMGFQEAALDVLSQVDAELDVCVMFRFLDTSRASAYIRKIRGFYKAAAFNPVAIIKQWATKEEQKNDEGREQLAKEASEALAKLEAEGQQYGFANISIIVYGNTPEECEDATRQVVGVIGNAGFGVIAEKDNLFAAWSSTLPGRWDQQKRLQFVETPAVSDIAPLCSVGEGSTLNEWLTQQSGKKTGPLTCLPTRHRTLQNVDLHHPGGKAHTLVVGPIGAGKSVLLNYLMSQTGRHGARRIRFDKDRSTRIPTLLGGGKFIDATGRFEAATSVNPLSLIGDEKHWSYVAEWVKLVIEGEDYTCTPQQETIIFERIRTLAKAYGREKWRLTGLITLLPDDLRERLAVWTEGQKNGRFFDHVDDGFSLSDDLSIEMGDLFQNFPVAAALFMDYAFYRIAQILDGKRYTVIEIEEAGFFFTYPKFYARLEIWAVTIRKLNAALLMATQSLGQLARVANFEIMKENIPNIIYLPNSDAINNQTLYREIFGLTEHQIRMISNAVPNRDYLWVTSTQTRMLQASFPKESLAYLRSDGRAQAILDKHVKSGVDNWQDAYVRDVLANA
SIO_010081: PDMSB3_RS37375
subclass of: SO_0000673
so part of: PDMSB3_RS37375
location: complement(23022..25484)
location: region:23022-25484:-1
so has part: feature:23022-25484:-1:exon

WP_165190335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23022-25484:-1:exon

PDMSB3_RS37380
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37380
old locus tag: PDMSB3_0030
so part of: sequence
location: complement(25478..25786)
location: region:25478-25786:-1
so has part: feature:25478-25786:-1:exon
subclass of: SO_0000010

position:25478:-1
position: 25478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25786:-1
position: 25786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25478-25786:-1:exon

PDMSB3_RS37380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37380
old locus tag: PDMSB3_0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585076.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MRQHKVSRGLSLPRQMGGADRMLAILNGTLTALLTYTSWTPSFLALGVVAHFYLRWRSSKDPWWRMVMLIYNRYPDVYAPEPHGKFSARFKRPYGFDQDLSC
SIO_010081: PDMSB3_RS37380
subclass of: SO_0000673
so part of: PDMSB3_RS37380
location: complement(25478..25786)
location: region:25478-25786:-1
so has part: feature:25478-25786:-1:exon

WP_165190337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25478-25786:-1:exon

PDMSB3_RS37385
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37385
old locus tag: PDMSB3_0031
so part of: sequence
location: complement(25788..26141)
location: region:25788-26141:-1
so has part: feature:25788-26141:-1:exon
subclass of: SO_0000010

position:25788:-1
position: 25788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26141:-1
position: 26141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25788-26141:-1:exon

PDMSB3_RS37385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37385
old locus tag: PDMSB3_0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbC
translation: MKQGKFFSTAATVAKKLRPGKPLIVGALLSVASAAAMAAGDYASLTGLTDIICTISNLISGPYLYGIGIVLITLGGVAVANSESNIAKTFSVVLIGLGIASVAVPIMRDHFHMTVAC
SIO_010081: PDMSB3_RS37385
subclass of: SO_0000673
so part of: PDMSB3_RS37385
location: complement(25788..26141)
location: region:25788-26141:-1
so has part: feature:25788-26141:-1:exon

WP_165190339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25788-26141:-1:exon

PDMSB3_RS37390
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37390
old locus tag: PDMSB3_0032
so part of: sequence
location: complement(26154..27203)
location: region:26154-27203:-1
so has part: feature:26154-27203:-1:exon
subclass of: SO_0000010

position:26154:-1
position: 26154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27203:-1
position: 27203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26154-27203:-1:exon

PDMSB3_RS37390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37390
old locus tag: PDMSB3_0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011875532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MHDVDDNPLLKLQPLKAEAVAMFFEALNPLKGLLDAPDLAEIMVNDHRNVWIEHRGVMSRVNVDLRPEHLEGAIHSLASSVDKSAHAGSDKGIINAGHKNLRIAAVMNPTAIDGHALSIRKHRETKLTLEDYVSMGAFSAANARPEEAEAISFEEGIQDEALMRALKALVQSRKNVLVAGGTSAGKTTFLNAMVGVIPEDQRVITIEDTMELKVQVPNRVRLLSNADTNVTTQLLVALCLRFRPDRIIVGEVRGGEGYDLLQALNTGHDGGLASLHANNGRTALSRLESLAMLGIPPGSRWELDDMRKNIADCFNYVVHFKRTGEMRHVSEILEIRGFRNNDYDLRRVF
SIO_010081: PDMSB3_RS37390
subclass of: SO_0000673
so part of: PDMSB3_RS37390
location: complement(26154..27203)
location: region:26154-27203:-1
so has part: feature:26154-27203:-1:exon

WP_165190341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26154-27203:-1:exon

PDMSB3_RS37395
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37395
old locus tag: PDMSB3_0033
so part of: sequence
location: complement(27534..28811)
location: region:27534-28811:-1
so has part: feature:27534-28811:-1:exon
subclass of: SO_0000010

position:27534:-1
position: 27534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28811:-1
position: 28811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27534-28811:-1:exon

PDMSB3_RS37395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37395
old locus tag: PDMSB3_0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585082.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA-like domain-containing protein
translation: MDRTVTVAGNGAVHPRIAKQRTELVLSQPFFGSLALRLKMVEDRSTKECWVDGESLGYNPEYVDKLSDLELRGVLALKVMQVANGHCWRQGAREAGRWSDSSQYAITPILRSSDFVLPRGALNDARFAGKSVEEIYGALTQEAKQKHPKPDQQPESDQQSKPQQQPEPDGQSSGPDGKGGGPRPQPGDGQGDPEPSAGSSCGEVRQYSGTDKPVKEAEWKVAVVQAAKAAQMRGKLPGDLQAMAGEAVRPVVDWRAVLHRFAQQSSPTDYSFATPNRRYLHLGFYLPSLHTPAVGDAVFVRDSSGSVFDETQAQFDAEILSVFHTLKPARLIVMDCDTRVTQVQVFERGDSPEIKPVCGGGGTAFTDPFNRVAADGLNPAFLVYLTDMVGSFPASAPHYPVLWASTTPLTRARRAPFGETVEVIC
SIO_010081: PDMSB3_RS37395
subclass of: SO_0000673
so part of: PDMSB3_RS37395
location: complement(27534..28811)
location: region:27534-28811:-1
so has part: feature:27534-28811:-1:exon

WP_165190343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27534-28811:-1:exon

PDMSB3_RS37400
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37400
old locus tag: PDMSB3_0034
so part of: sequence
location: complement(28822..29733)
location: region:28822-29733:-1
so has part: feature:28822-29733:-1:exon
subclass of: SO_0000010

position:28822:-1
position: 28822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29733:-1
position: 29733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28822-29733:-1:exon

PDMSB3_RS37400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37400
old locus tag: PDMSB3_0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585084.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTNIQSKVMLCSVTISTWVARRFDGKATEEVENKHHAKGIGRFNKRLLPENSPSFQEVVTIAGRIRKYFYDHSLKYDQLGVRLLPTMIYMEFADKMRSLKDEFDLAVSVFLTDYLDLKERARAELNGLFNEADYPTLAELSTKFGVKMAVLPFPDASQFGVDLPADVLTTLKSELDEHVLASIATANEDLVERMYTAVSQMASRLYATGNVRLDVANNVRDLCALLPKLNFSNDPKLTHILDQAKTHLAVHTGADLKESNVLRSQVASKAQEIEGLMAAFMGITPETEIEPADHSAQLRLVA
SIO_010081: PDMSB3_RS37400
subclass of: SO_0000673
so part of: PDMSB3_RS37400
location: complement(28822..29733)
location: region:28822-29733:-1
so has part: feature:28822-29733:-1:exon

WP_086916698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28822-29733:-1:exon

PDMSB3_RS37405
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37405
old locus tag: PDMSB3_0035
so part of: sequence
location: complement(29853..30878)
location: region:29853-30878:-1
so has part: feature:29853-30878:-1:exon
subclass of: SO_0000010

position:29853:-1
position: 29853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30878:-1
position: 30878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29853-30878:-1:exon

PDMSB3_RS37405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37405
old locus tag: PDMSB3_0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013700032.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MKVTPAQLTELLSLYVPKRLPVLITGRPGIGKSDIVEQVAHATDHDLLISHPVVEDPTDSKGLPFPAPDGLNAKFLPFGDLERAMKARRPLIWFLDDLGQASPAVQAAKMQLLLARRIGEHVLPPHVTFLAATNRRTDNAGVTGILDPVISRFATVVELEATIDGWTKWAVRNNVPPELIAFLRFRPDLLSVQKTSRDIENMPSPRSWGFIAKTMGVVPKHLEHISHAGSVGEGAATELVSFLQIYRELPNPDALLATPDKAMIPQTPSTLYAIATALAARATEANFDRVVTYTERMIEAGHREFAALLVRDALERTPEIANSYAFIRAQGGEIGAIIKGD
SIO_010081: PDMSB3_RS37405
subclass of: SO_0000673
so part of: PDMSB3_RS37405
location: complement(29853..30878)
location: region:29853-30878:-1
so has part: feature:29853-30878:-1:exon

WP_165190345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29853-30878:-1:exon

PDMSB3_RS37410
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37410
old locus tag: PDMSB3_0036
so part of: sequence
location: complement(31146..32480)
location: region:31146-32480:-1
so has part: feature:31146-32480:-1:exon
subclass of: SO_0000010

position:31146:-1
position: 31146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32480:-1
position: 32480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31146-32480:-1:exon

PDMSB3_RS37410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37410
old locus tag: PDMSB3_0036
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYQLSFAGLTLPFATLLEVLAVFRTDARLLALESSDIVLKHSGQAVQVLRHNGTLTVRRPGTARDVFLSLVDEIDGAYFRPNGVLQAAWQIRRSHWKLLYDAFDLTSTPRLIFSSEQIEAAANSRGRLDLHELLQQECERRFGFRYAGPEYGRTRDRNGRHEVHVAYALAEGWAVPEAVLEEYRQLPDRFTTDMSWGRVLVDVPELRGAMSPHKVRVLVSVMRHEKGGISSANAALLAMVMRLAPNSPTFEEVDDLLFHHGLVQAYNLPDRYATPQPLGTPVSKLAEVYRQNMADKRRDTSIARLKKERAAGRMSQRTVDQQTQIALLEHGRETFMLGNEMSNAIDSGDVHYLLQIMDCPDDRNRVAKQTVREVFGIKLLGVRAATRRRAIFALAGYDEACQAEWESAGSPQARQRVIELHQATRAAASVHPAVFARTQVAHHA
SIO_010081: PDMSB3_RS37410
subclass of: SO_0000673
so part of: PDMSB3_RS37410
location: complement(31146..32480)
location: region:31146-32480:-1
so has part: feature:31146-32480:-1:exon

WP_165190347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31146-32480:-1:exon

PDMSB3_RS37415
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37415
old locus tag: PDMSB3_0037
so part of: sequence
location: complement(32585..33028)
location: region:32585-33028:-1
so has part: feature:32585-33028:-1:exon
subclass of: SO_0000010

position:32585:-1
position: 32585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33028:-1
position: 33028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32585-33028:-1:exon

PDMSB3_RS37415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37415
old locus tag: PDMSB3_0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013954393.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATGNGAVAGAIAGARADALPCGDRLDVEGKTVGEVCSMLCKVLRSTELEPEWLVTANMLDDADEATNGARMDRVWPADSVWNRVAVSVAIGRSEGWIVHVDWISRTEIPDAVGRGYAVMPLLRAKVFVPDQAWQLARFIARSIDVA
SIO_010081: PDMSB3_RS37415
subclass of: SO_0000673
so part of: PDMSB3_RS37415
location: complement(32585..33028)
location: region:32585-33028:-1
so has part: feature:32585-33028:-1:exon

WP_232064490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32585-33028:-1:exon

PDMSB3_RS37420
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37420
old locus tag: PDMSB3_0038
so part of: sequence
location: complement(33314..33766)
location: region:33314-33766:-1
so has part: feature:33314-33766:-1:exon
subclass of: SO_0000010

position:33314:-1
position: 33314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33766:-1
position: 33766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33314-33766:-1:exon

PDMSB3_RS37420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37420
old locus tag: PDMSB3_0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007582533.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLAKVKVEYSCGTTITDRVTLDPETGQVHLPPRLQTLLQAMDATECSPSFVLEHDGATLSVSEDSSGLRKIGKPSGRKSGFEQLLNPTKDQRQQNARFLHTLSAASVGGLVGYVHAASKLDFTTGAGTAILAVIAILLWYVGFIGMKGE
SIO_010081: PDMSB3_RS37420
subclass of: SO_0000673
so part of: PDMSB3_RS37420
location: complement(33314..33766)
location: region:33314-33766:-1
so has part: feature:33314-33766:-1:exon

WP_165190349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33314-33766:-1:exon

PDMSB3_RS37425
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37425
old locus tag: PDMSB3_0039
so part of: sequence
location: complement(33763..34155)
location: region:33763-34155:-1
so has part: feature:33763-34155:-1:exon
subclass of: SO_0000010

position:33763:-1
position: 33763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34155:-1
position: 34155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33763-34155:-1:exon

PDMSB3_RS37425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37425
old locus tag: PDMSB3_0039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007582531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFPKLFYADRRAAGAGATAALQQQATRVLRRVAQDLRLRSHEIVVEPSRRNLPGRVSLRTETLFVDVLDRPCQKPVALSFRTRRGRSDLTGGGENYVPLDQIETTRGYQSFLDGLRLAGGIDTTSGGRR
SIO_010081: PDMSB3_RS37425
subclass of: SO_0000673
so part of: PDMSB3_RS37425
location: complement(33763..34155)
location: region:33763-34155:-1
so has part: feature:33763-34155:-1:exon

WP_197740332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33763-34155:-1:exon

PDMSB3_RS37430
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37430
old locus tag: PDMSB3_0040
so part of: sequence
location: complement(34238..34699)
location: region:34238-34699:-1
so has part: feature:34238-34699:-1:exon
subclass of: SO_0000010

position:34238:-1
position: 34238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34699:-1
position: 34699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34238-34699:-1:exon

PDMSB3_RS37430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37430
old locus tag: PDMSB3_0040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007582529.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKLLISIALLSLLTACASADFGSPNTYQRYDVQHLGQMEQATIIRVRQVTIESSSDSSGLTSIVSSAASAFLGSQIIGNGRGRYISGALSGAAAGFISQHVSAAMSRHSGVEVFLRRANGQTVVVTQVDDQQFAPGEHVYLVSSGSGYRITH
SIO_010081: PDMSB3_RS37430
subclass of: SO_0000673
so part of: PDMSB3_RS37430
location: complement(34238..34699)
location: region:34238-34699:-1
so has part: feature:34238-34699:-1:exon

WP_165190351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34238-34699:-1:exon

PDMSB3_RS37435
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37435
old locus tag: PDMSB3_0042
so part of: sequence
location: complement(35077..35361)
location: region:35077-35361:-1
so has part: feature:35077-35361:-1:exon
subclass of: SO_0000010

position:35077:-1
position: 35077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35361:-1
position: 35361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35077-35361:-1:exon

PDMSB3_RS37435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37435
old locus tag: PDMSB3_0042
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQQIIVSEELAGVLAVSADPHRVQEKWGFREKQRVFAQAVSKLPIRQFSGTILSLWSDGTATVKFDHDFAFDAERELVKSGRVDLHYLTRLAS
SIO_010081: PDMSB3_RS37435
subclass of: SO_0000673
so part of: PDMSB3_RS37435
location: complement(35077..35361)
location: region:35077-35361:-1
so has part: feature:35077-35361:-1:exon

WP_165190353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35077-35361:-1:exon

PDMSB3_RS37440
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37440
old locus tag: PDMSB3_0043
so part of: sequence
location: complement(35642..35791)
location: region:35642-35791:-1
so has part: feature:35642-35791:-1:exon
subclass of: SO_0000010

position:35642:-1
position: 35642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35791:-1
position: 35791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35642-35791:-1:exon

PDMSB3_RS37440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37440
old locus tag: PDMSB3_0043
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSTLKHAFSSLAWYTRQDAEAWKMLTFLVGVVALATAIASVSNVPFSL
SIO_010081: PDMSB3_RS37440
subclass of: SO_0000673
so part of: PDMSB3_RS37440
location: complement(35642..35791)
location: region:35642-35791:-1
so has part: feature:35642-35791:-1:exon

WP_165190355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35642-35791:-1:exon

PDMSB3_RS37445
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: ltrA
locus tag: PDMSB3_RS37445
old locus tag: PDMSB3_0044
so part of: sequence
location: complement(35937..37307)
location: region:35937-37307:-1
so has part: feature:35937-37307:-1:exon
subclass of: SO_0000010

position:35937:-1
position: 35937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37307:-1
position: 37307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35937-37307:-1:exon

PDMSB3_RS37445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: ltrA
locus tag: PDMSB3_RS37445
old locus tag: PDMSB3_0044
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007181179.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MGAQQKTHRVLDSGGRGEAPRAADRGAEPMAANPESESPSACDRLMEEVCERENLKRALKRVKANKGASGVDGVTVQALPALLREQWPSIRDTLLNGTYKPQPVRCVEIPKPDGGGVRKLGIPCALDRFVQQAVLQVLQRQWDPTFSEASYGFRPGRSAHQAVAKAQGYIQSGYRWVVDLDLEKFFDRVSHDILMSRVAKRVSDRRVLKLIRSFLTAGVMEHGLVGATDEGTPQGGPLSPLLSNLMLDDLDRELGRRGLRFVRYADDCNVYVRSERAGQRVMVGVKAFLTGKLKLKVNEAKSAVARPHTRKFLGFSFTPQARAKRRIAPKALARFKERIRELTQRTRGNSVDRMIGTLKRYLTGWRGYFGFCETPSVLKQLDEWIRRRLRCFFWKQWKRGRTRFRELVARGVSRNLAAQTAGSPHGVWHLSNSPALNKALSNRYFRSLGLPSVGPV
SIO_010081: PDMSB3_RS37445
subclass of: SO_0000673
so part of: PDMSB3_RS37445
location: complement(35937..37307)
location: region:35937-37307:-1
so has part: feature:35937-37307:-1:exon

WP_165190357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35937-37307:-1:exon

PDMSB3_RS37450
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37450
so part of: sequence
location: 38161..38382
location: region:38161-38382:1
so has part: feature:38161-38382:1:exon
subclass of: SO_0000010

position:38161:1
position: 38161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38382:1
position: 38382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38161-38382:1:exon

PDMSB3_RS37450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLQIIDLSSLLERLTSPATRVHRTIASTAEVNALLDGDAVVAARYDSLLAARATAGATQSEPETPAQKAFVF
SIO_010081: PDMSB3_RS37450
subclass of: SO_0000673
so part of: PDMSB3_RS37450
location: 38161..38382
location: region:38161-38382:1
so has part: feature:38161-38382:1:exon

WP_165190359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38161-38382:1:exon

PDMSB3_RS37455
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37455
old locus tag: PDMSB3_0047
so part of: sequence
location: 38447..38842
location: region:38447-38842:1
so has part: feature:38447-38842:1:exon
subclass of: SO_0000010

position:38447:1
position: 38447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38842:1
position: 38842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38447-38842:1:exon

PDMSB3_RS37455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37455
old locus tag: PDMSB3_0047
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNDATSSLLVLFVLAIIGGLFWISRTLGASFSSVCTATVPILFSAVILFAAWRFLDDFALPLLAGFFVIAWPSTWPVLDSIASGGRDTEDFFRPMGDPLINSDWVKWGVEGLLVGLLAAAIYARRRRRYW
SIO_010081: PDMSB3_RS37455
subclass of: SO_0000673
so part of: PDMSB3_RS37455
location: 38447..38842
location: region:38447-38842:1
so has part: feature:38447-38842:1:exon

WP_165190361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38447-38842:1:exon

PDMSB3_RS37460
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37460
old locus tag: PDMSB3_0048
so part of: sequence
location: complement(38885..39973)
location: region:38885-39973:-1
so has part: feature:38885-39973:-1:exon
subclass of: SO_0000010

position:38885:-1
position: 38885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39973:-1
position: 39973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38885-39973:-1:exon

PDMSB3_RS37460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37460
old locus tag: PDMSB3_0048
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGATVLTGKKAGAFQTTDGEWMFALFERTYEKNCYPHIDHWSAIAFGRYADVMRRVFRHASSCEGGMLQSRAGYIKPENYIGTWRSLLTKPFRLPEQKIRLEVSKSFRAAIPEASIEDVRSSLSAAGFAERVDEVVGGQAELSLHGDASLLETIYGESGALSAWRVLSEHDCSSVPVAGDLKLPSRDSSAMDRMPAVRCYKIDDENRLLSFDEQPWDNGGWQYSAIGSFITDVAYPIEMEAPGFAKGAIPAYRQLLTNAGPLPGETVINVTRQPEGVEDYCARVADELAGYLGRADGEGRAPERFSFRFGDVPAEPRGSAMYKLCNLRSQQVTWTLPQDAASTQPVQEVPYTDLAQMILELG
SIO_010081: PDMSB3_RS37460
subclass of: SO_0000673
so part of: PDMSB3_RS37460
location: complement(38885..39973)
location: region:38885-39973:-1
so has part: feature:38885-39973:-1:exon

WP_165190363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38885-39973:-1:exon

PDMSB3_RS37465
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37465
old locus tag: PDMSB3_0049
so part of: sequence
location: complement(40078..40548)
location: region:40078-40548:-1
so has part: feature:40078-40548:-1:exon
subclass of: SO_0000010

position:40078:-1
position: 40078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40548:-1
position: 40548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40078-40548:-1:exon

PDMSB3_RS37465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37465
old locus tag: PDMSB3_0049
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPQKPSTPVGKMFIRWAQSAAAGAAVSYAANHYGVVPVLQSVARAVLCHEALVGPEVGKRLLMVLAVAALLFAASLATEKRRNAFLDAVASRGRRLADWLLAGVAVKVCFVCGALAGFGGLGWLAGLLTLVMYGVVLLCVRHLVMTALMPRISRS
SIO_010081: PDMSB3_RS37465
subclass of: SO_0000673
so part of: PDMSB3_RS37465
location: complement(40078..40548)
location: region:40078-40548:-1
so has part: feature:40078-40548:-1:exon

WP_165190365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40078-40548:-1:exon

PDMSB3_RS37470
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37470
old locus tag: PDMSB3_0050
so part of: sequence
location: complement(40640..41452)
location: region:40640-41452:-1
so has part: feature:40640-41452:-1:exon
subclass of: SO_0000010

position:40640:-1
position: 40640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41452:-1
position: 41452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40640-41452:-1:exon

PDMSB3_RS37470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37470
old locus tag: PDMSB3_0050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007582516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRTRC system ThiF family protein
translation: MTLLHTTPQHMLSGPWKVVVVGAGGTGSALLPSLARLHHAMIELGHPGGIECVVYDDDTVSEFNVGRQGFYPNDVGQYKATLLVNRLNLLMGTNWTAEPRRVDSKLNLYADMVIGCVDSRRARHAIAQAAKRGKVRYYLDCGNETDRGQVILGEFGKARHDRLPHVGDLFPDLLNPKNDKGDDAPSCSMADALRKQSLVINQAISVQAFNLLWSLFRNGGLNFSGVFVNLATGRTNPIPIDPAAWARFGYDAPKPPVKKTRKPAKGKVSV
SIO_010081: PDMSB3_RS37470
subclass of: SO_0000673
so part of: PDMSB3_RS37470
location: complement(40640..41452)
location: region:40640-41452:-1
so has part: feature:40640-41452:-1:exon

WP_165190367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40640-41452:-1:exon

PDMSB3_RS37475
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37475
old locus tag: PDMSB3_0051
so part of: sequence
location: complement(41449..42093)
location: region:41449-42093:-1
so has part: feature:41449-42093:-1:exon
subclass of: SO_0000010

position:41449:-1
position: 41449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42093:-1
position: 42093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41449-42093:-1:exon

PDMSB3_RS37475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37475
old locus tag: PDMSB3_0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007582514.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRTRC system protein A
translation: MNPVDQVLQGSFPSVMVPTREPVVPMSAPGERLLIASNGVFIEIDRPWIRLVRRLGSFSWRTPVPYGKAADATEVRCGAVPAELVAGFARMARAALPNEVGAWITWNASTGAFRLLPLPSLSHRPVHLQYERPELQAGEWLVVDCHSHGRGRAYFSPTDDRDDQHDVKLALVLGHCHQVPSVALRLCVKGRFEVQSAVPERWKAALATLAAEVV
SIO_010081: PDMSB3_RS37475
subclass of: SO_0000673
so part of: PDMSB3_RS37475
location: complement(41449..42093)
location: region:41449-42093:-1
so has part: feature:41449-42093:-1:exon

WP_165190369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41449-42093:-1:exon

PDMSB3_RS37480
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37480
old locus tag: PDMSB3_0052
so part of: sequence
location: complement(42090..42818)
location: region:42090-42818:-1
so has part: feature:42090-42818:-1:exon
subclass of: SO_0000010

position:42090:-1
position: 42090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42818:-1
position: 42818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42090-42818:-1:exon

PDMSB3_RS37480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37480
old locus tag: PDMSB3_0052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007582512.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRTRC system protein B
translation: MKNVSIGQTGHDVALSSALLLYTAQNGSHYATVHPVAAERETGRPIIGAGRPLDRKALIDALMQLDRNAAPKADFLPATVLGVTSAAVTWWCPPAPRRVFFKCEELGERSAIVPHPGLVFQASTNGFSVFALKGDSRPEPSTPLFEPPYFNTWDRGKICIGSANVPRRIEVAAIAGWEEGFFTSAFTHPNHGSKRVEYKNGFYAFWKDMLDGGFEAFPLGVLVPMKGATAGKLVAGQIGGQE
SIO_010081: PDMSB3_RS37480
subclass of: SO_0000673
so part of: PDMSB3_RS37480
location: complement(42090..42818)
location: region:42090-42818:-1
so has part: feature:42090-42818:-1:exon

WP_165190371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42090-42818:-1:exon

PDMSB3_RS37485
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37485
old locus tag: PDMSB3_0053
so part of: sequence
location: complement(42829..43974)
location: region:42829-43974:-1
so has part: feature:42829-43974:-1:exon
subclass of: SO_0000010

position:42829:-1
position: 42829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43974:-1
position: 43974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42829-43974:-1:exon

PDMSB3_RS37485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37485
old locus tag: PDMSB3_0053
inference: COORDINATES: protein motif:HMM:TIGR03742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRTRC system protein F
translation: MLFDPSFTDRPVDAGAGASWQPPVAAVARHRSADCVLTLPDVAEDVPVRASLKWREDTSVDAVVLEQFRHGPLLAADVEAPVSPVDAFQQAFFAWARRQLPAPLRHMSFGLDLCDTNAVTDAIQHQYDHDEFKPRTPLHLGVKCSDEWVHQVGDLAEPLRRAHPLLLHTIFETVDRVSGKTVLIRTPGWFLCEASCMHWEGDESATDEDVREWLQEMNGDDSDVIDRYLPSVLRPLLCPDEIRAPAKVEGRRSRSPTLSDNELRELRKASPAMVARVCVELLALKHLLRKAGKSGCLSDGYDAQPIYSGCTLLLAHNERTGELLDDHMENAFQAGEATEYSRFITFSNTRQGIREQYTRWSLGLRMLHHLDRLLALVVDPN
SIO_010081: PDMSB3_RS37485
subclass of: SO_0000673
so part of: PDMSB3_RS37485
location: complement(42829..43974)
location: region:42829-43974:-1
so has part: feature:42829-43974:-1:exon

WP_165190373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42829-43974:-1:exon

PDMSB3_RS37490
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37490
old locus tag: PDMSB3_0055
so part of: sequence
location: complement(44071..44289)
location: region:44071-44289:-1
so has part: feature:44071-44289:-1:exon
subclass of: SO_0000010

position:44071:-1
position: 44071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44289:-1
position: 44289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44071-44289:-1:exon

PDMSB3_RS37490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37490
old locus tag: PDMSB3_0055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012217989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRTRC system protein C
translation: MSISITALVRQFSYNGVAFADPGPAFSPEDVRDLYSAQYPELTTASVDGPEFAGDVATYKFVRAAGAKGSYA
SIO_010081: PDMSB3_RS37490
subclass of: SO_0000673
so part of: PDMSB3_RS37490
location: complement(44071..44289)
location: region:44071-44289:-1
so has part: feature:44071-44289:-1:exon

WP_128584721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44071-44289:-1:exon

PDMSB3_RS37495
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37495
old locus tag: PDMSB3_0056
so part of: sequence
location: complement(44302..44778)
location: region:44302-44778:-1
so has part: feature:44302-44778:-1:exon
subclass of: SO_0000010

position:44302:-1
position: 44302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44778:-1
position: 44778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44302-44778:-1:exon

PDMSB3_RS37495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37495
old locus tag: PDMSB3_0056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007582506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRTRC system protein E
translation: MFVELEALLKSCGGLKLAMKMKGDAMVVVVMPEGEAKDTALRQPLVMTATAAELDAGFAEHLATYTGAHASLAEQVAATTAILGEAQKAQVTKATKALSGKAGRSSPAAAKASPDEDAEDDDSESSESDAPVAANEGKGDAPAPAEPASSGTDLASLF
SIO_010081: PDMSB3_RS37495
subclass of: SO_0000673
so part of: PDMSB3_RS37495
location: complement(44302..44778)
location: region:44302-44778:-1
so has part: feature:44302-44778:-1:exon

WP_128584720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44302-44778:-1:exon

PDMSB3_RS37500
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37500
old locus tag: PDMSB3_0057
so part of: sequence
location: complement(44877..46547)
location: region:44877-46547:-1
so has part: feature:44877-46547:-1:exon
subclass of: SO_0000010

position:44877:-1
position: 44877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46547:-1
position: 46547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44877-46547:-1:exon

PDMSB3_RS37500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37500
old locus tag: PDMSB3_0057
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343161.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRTRC system ParB family protein
translation: MQQQPTLALKQITIAANPRTYFDAAEMEELTASVREKGVIQPVIVRTLADGGFALVAGGRRYRAAMTAHGEDYEIPVVVKEIDEVEAKQLAIIENIQRADMSPAEEAIAAAEQVGLCKGDRDEVARIFGWSRATLDKRLALMNCSAAVLEALNTRQILLGHAELLAALPKETQDKLLPVIVKEGKSVAEVKKTIEQVACSLSAAIFDKTDCVSCPHNSSTQGEMFGESIATGNCTNRTCFNEKTEKQLEVVATGLRDDFPVVRIVRAGDNHTRIQLAVEGAKGVGEEQAKACHACQNYGAAVSGLPDSVGKVYKGQCFDTVCNMKMVAKRLQAEKPAVAPKSEAKADGTGTAKAAAKASGTAPSTTGNPPATVVAESDRIKTYRVALWRKALRREVGQNAALAQRYLVSIALAGQARCVDDSTMKGIWEKLTEEKIAVSDVAKAATSVAAADGDKFALALTGVTVAAIQGLDVHHLTSLCRHHRLDLNQHWKLCKEFLELITKSEMMVVADELGIRAALGDEFKKVFSKSKAEVIDALLNVKGFDYTGKIPKVLKY
SIO_010081: PDMSB3_RS37500
subclass of: SO_0000673
so part of: PDMSB3_RS37500
location: complement(44877..46547)
location: region:44877-46547:-1
so has part: feature:44877-46547:-1:exon

WP_165190375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44877-46547:-1:exon

PDMSB3_RS37505
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37505
old locus tag: PDMSB3_0058
so part of: sequence
location: complement(46834..47079)
location: region:46834-47079:-1
so has part: feature:46834-47079:-1:exon
subclass of: SO_0000010

position:46834:-1
position: 46834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47079:-1
position: 47079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46834-47079:-1:exon

PDMSB3_RS37505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37505
old locus tag: PDMSB3_0058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585604.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKESKVSVLVGDGVVTVKREGSNRALQANILGTVEADGVQVFCLDRLVHASHEQQFGEWTLAGAVTTLLSRPLKLAAVALQ
SIO_010081: PDMSB3_RS37505
subclass of: SO_0000673
so part of: PDMSB3_RS37505
location: complement(46834..47079)
location: region:46834-47079:-1
so has part: feature:46834-47079:-1:exon

WP_165190377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46834-47079:-1:exon

PDMSB3_RS37510
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37510
old locus tag: PDMSB3_0059
so part of: sequence
location: complement(47076..50195)
location: region:47076-50195:-1
so has part: feature:47076-50195:-1:exon
subclass of: SO_0000010

position:47076:-1
position: 47076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50195:-1
position: 50195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47076-50195:-1:exon

PDMSB3_RS37510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37510
old locus tag: PDMSB3_0059
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585606.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SNF2-related protein
translation: MQRDLFSFAPDWYEPLRSLLSLGSQAAPVAHQGELAAARRQHLGQFFTPDAIAAFMWSFVSGWRLGRRIRLLDNSVGSGRLFQYADPERYAVYGVDVHADVITQCQKVFEEAGFDCEFRHAGMEDIQPTNFDIAIINPPFSVHLESPHLKPFSCTSWGRYGANTSALSHEYAVHQALDAANIVVALLPITTAEAVLAGGLGDSAQRRAAGLFELPPDAFRSEGANVRTAVVVFDRYRSRPSDFVRTKIENLALPGPDLGLHHEDRSFGEPRLRFQKLDDSVPAITRPVTGNKSVVISHDGRRVRLGFACGFNEAMVLNSVFVERIYSRDGHRLPRGFRYDGQGLLDIETYLMQGDPRGALGKLLDRIRSVGGEPQFAPGFLEHLERRSRRSERQATPLRHVAWTTGAGSADVVTGKARETHKIDLSRWASPLVMAGEPVSFTREDDGRYRYAVKGATYHLSVDELNARFAVDNVAEGWEVVHEGLAVKFPQQAAALRARVRALGVDRWLNWEFQTEDLVETLMKPSGCVIAWEQGCGKSRLAIALILVAKVRHGLIVVESRLIDEMMKEIAMLPLNADDVKVIGCAADLNDLRRFNLISYERLRMPVDKGASKRVTYAHRLRRRIGLLVADEGERLANPTSDQSRALWQLSARRRYVLTGSPIPNYPRDAFGLIAFSGGDGTAAQPYGYRLGYLEENWINTVQYAMRGVDRFRDDFVVLEWVTWQFAESLQEGAKREVPKIGNLHGYRAMLAPHIKRRLVAEPEVAKYIQIDPPEFEVETVDWDRGHLATYLRAADEFADWYCSSRDDRKACNLITILARIRAVHFAANFPQYGMEGVDRIRGLTSKQRAVISRMREIAAEGKQAIVFAENPGVLDLLARELESHGVQSVAFHGEIPIKRRVSDKDKRFLTGLATGLLATKASGRAGYNLPNADYILFYDRSWTWRIEYQAMRRALRWNRKGTLKVLYFHLPGSIDEYQDQMVAHKRDATQAGLDWATPELEDETFLHMDSLLDRFVHDLALNADRESGDMRKLLKEAA
SIO_010081: PDMSB3_RS37510
subclass of: SO_0000673
so part of: PDMSB3_RS37510
location: complement(47076..50195)
location: region:47076-50195:-1
so has part: feature:47076-50195:-1:exon

WP_165190379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47076-50195:-1:exon

PDMSB3_RS37515
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37515
old locus tag: PDMSB3_0060
so part of: sequence
location: complement(50273..50494)
location: region:50273-50494:-1
so has part: feature:50273-50494:-1:exon
subclass of: SO_0000010

position:50273:-1
position: 50273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50494:-1
position: 50494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50273-50494:-1:exon

PDMSB3_RS37515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37515
old locus tag: PDMSB3_0060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRQRIYLFSRYVARTYALSLDNLITIVRARECYSPMFRAAALRHVVLQAPLHVTGGQPFAARRRAVRKFYQL
SIO_010081: PDMSB3_RS37515
subclass of: SO_0000673
so part of: PDMSB3_RS37515
location: complement(50273..50494)
location: region:50273-50494:-1
so has part: feature:50273-50494:-1:exon

WP_088176886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50273-50494:-1:exon

PDMSB3_RS37520
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37520
old locus tag: PDMSB3_0061
so part of: sequence
location: complement(50508..51452)
location: region:50508-51452:-1
so has part: feature:50508-51452:-1:exon
subclass of: SO_0000010

position:50508:-1
position: 50508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51452:-1
position: 51452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50508-51452:-1:exon

PDMSB3_RS37520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37520
old locus tag: PDMSB3_0061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTHHPRIRASTTAHPRNHLTAASRGRSFNPDGIHPALAWCPVKSNEGYTMYTALVQQFKDAQTKAAAAYLEVRAAETALFPPDGQYSYCAAETRSEYKTERELSDFCNRLAHVLVREAVRRFSPPGGRLEIEDSRELANASIDIHEALRAGKCPDFDAFWTHLERTYSGDAGKRIGLIQAAKSIIDGFYIRPNSEIKRTSSAIVLEARIWSETCYRSSARKPTYQSGQTVVGLSRGLSAFAAHAGFDVLASELKHGRLADYEFETREKVCFRGVDIVMYNEKWQFKFSHEVGDALSLFISEFGADYLATRDRY
SIO_010081: PDMSB3_RS37520
subclass of: SO_0000673
so part of: PDMSB3_RS37520
location: complement(50508..51452)
location: region:50508-51452:-1
so has part: feature:50508-51452:-1:exon

WP_232064491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50508-51452:-1:exon

PDMSB3_RS37525
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37525
old locus tag: PDMSB3_0063
so part of: sequence
location: 51695..52297
location: region:51695-52297:1
so has part: feature:51695-52297:1:exon
subclass of: SO_0000010

position:51695:1
position: 51695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52297:1
position: 52297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51695-52297:1:exon

PDMSB3_RS37525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37525
old locus tag: PDMSB3_0063
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFCYAFPGTSLLRPFEPAFSNDPNAPFFSQLCARACLTTRPKIGAAPRSRARSTSVIMKLSQRATLSILAIAVLTSVATIGVAGLQLRPQRAAADVVIDTAIVSELTGVSDAIRDMPVALRTGVLARHEVQSEQALNESLNAQRANLATAERQRANELASSDRRSASLIALALFNAFATALGAISLFDAYRAKRGHPPS
SIO_010081: PDMSB3_RS37525
subclass of: SO_0000673
so part of: PDMSB3_RS37525
location: 51695..52297
location: region:51695-52297:1
so has part: feature:51695-52297:1:exon

WP_165190381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51695-52297:1:exon

PDMSB3_RS37530
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37530
old locus tag: PDMSB3_0064
so part of: sequence
location: 52303..52572
location: region:52303-52572:1
so has part: feature:52303-52572:1:exon
subclass of: SO_0000010

position:52303:1
position: 52303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52572:1
position: 52572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52303-52572:1:exon

PDMSB3_RS37530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37530
old locus tag: PDMSB3_0064
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQTKEQLQPATGYCIETRAVALSNGYFPGLVLERTFIQRHVVEGVTFLEFQNASGVRHVIDVATIERIVPLGRMAQRGDALRTSEIQP
SIO_010081: PDMSB3_RS37530
subclass of: SO_0000673
so part of: PDMSB3_RS37530
location: 52303..52572
location: region:52303-52572:1
so has part: feature:52303-52572:1:exon

WP_165190383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52303-52572:1:exon

PDMSB3_RS37535
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37535
old locus tag: PDMSB3_0065
so part of: sequence
location: 52569..52862
location: region:52569-52862:1
so has part: feature:52569-52862:1:exon
subclass of: SO_0000010

position:52569:1
position: 52569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52862:1
position: 52862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52569-52862:1:exon

PDMSB3_RS37535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37535
old locus tag: PDMSB3_0065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTIVFEFLDTTRGQSGPFGLAALGMPDCWMDALIGDGYIEHRDYIAPGILRRVVARFPTRDHRDQFACSVRQVSKLLGTYAFRGTAGVGVRWFQKD
SIO_010081: PDMSB3_RS37535
subclass of: SO_0000673
so part of: PDMSB3_RS37535
location: 52569..52862
location: region:52569-52862:1
so has part: feature:52569-52862:1:exon

WP_165190385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52569-52862:1:exon

PDMSB3_RS37540
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37540
old locus tag: PDMSB3_0066
so part of: sequence
location: 52866..54080
location: region:52866-54080:1
so has part: feature:52866-54080:1:exon
subclass of: SO_0000010

position:52866:1
position: 52866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54080:1
position: 54080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52866-54080:1:exon

PDMSB3_RS37540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37540
old locus tag: PDMSB3_0066
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1173 family protein
translation: MTDVTFDGLVTSLEEVQENPARFAARLERAKRSPGFAECICQSASGGKPLRLVVRRYGALFHLARWPEEGTHHNSKTCSFFAEATESGASAGDEQDAIRSTPAGLNARLDVSLTVRTVGTVKADGTAKAAGRSTSRRTAPLLGFLQRVWQDAGLNQWSGGLQRNWGTCSSQILAVLGEGKINGKPIQDVVHVMRRYEESEQATIKAEFDSFLNRIRTTPTASDRGVVIAEVKSIDPSKYGFILRLRQTFETFYASKQLVESAARSFRHAWPMIGKAEARIVAVLVIERTKDDNLRAIDLALQLCNRSFIPCDSSYEVDMANRLVEERRRFLKPIRRDDADKMLPDFRLLDTTPPTAIEVYGMESNDAYRARKTEKQALYARSKEPCVEWVPPSPLGSVMLPPAT
SIO_010081: PDMSB3_RS37540
subclass of: SO_0000673
so part of: PDMSB3_RS37540
location: 52866..54080
location: region:52866-54080:1
so has part: feature:52866-54080:1:exon

WP_165190387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52866-54080:1:exon

PDMSB3_RS37545
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37545
old locus tag: PDMSB3_0067
so part of: sequence
location: 54138..54632
location: region:54138-54632:1
so has part: feature:54138-54632:1:exon
subclass of: SO_0000010

position:54138:1
position: 54138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54632:1
position: 54632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54138-54632:1:exon

PDMSB3_RS37545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37545
old locus tag: PDMSB3_0067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343144.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESNSFFLRRAVARGADWHVSYPALCMASSTDPVDERRKQIVVAAADDATIRMAFFSSLGAILDFRAAWTEMDAATRGWLAFTTRWNRWWLPDVAALASIERYAHAPTDVRLAGGSASVAPHDTEAFRRYLDTVEQHYRRDEAISRALFPAEAPFALHSGCLTP
SIO_010081: PDMSB3_RS37545
subclass of: SO_0000673
so part of: PDMSB3_RS37545
location: 54138..54632
location: region:54138-54632:1
so has part: feature:54138-54632:1:exon

WP_232064492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54138-54632:1:exon

PDMSB3_RS37550
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37550
old locus tag: PDMSB3_0068
so part of: sequence
location: 54660..54971
location: region:54660-54971:1
so has part: feature:54660-54971:1:exon
subclass of: SO_0000010

position:54660:1
position: 54660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54971:1
position: 54971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54660-54971:1:exon

PDMSB3_RS37550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37550
old locus tag: PDMSB3_0068
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343143.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSVIPFARLRVTTDNRTHRPGECAHHNIKLDSRGGIVTCRDCGASLSPFWALTMLAEQYELALDHARRLEDRLARADSRILELSAELDGQTRTKGRLEPAST
SIO_010081: PDMSB3_RS37550
subclass of: SO_0000673
so part of: PDMSB3_RS37550
location: 54660..54971
location: region:54660-54971:1
so has part: feature:54660-54971:1:exon

WP_232064493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54660-54971:1:exon

PDMSB3_RS37555
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37555
old locus tag: PDMSB3_0069
so part of: sequence
location: 55031..55423
location: region:55031-55423:1
so has part: feature:55031-55423:1:exon
subclass of: SO_0000010

position:55031:1
position: 55031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55423:1
position: 55423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55031-55423:1:exon

PDMSB3_RS37555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37555
old locus tag: PDMSB3_0069
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRTFACGHSGKGKYCHACDATAKAKEEERLARQEKRLSKAEAASSDLIDLSCVDHLASVQREARLVLSKVRDGTHPCALKGKPIRSSNGQLFSVPVGHTYRLMFDAASLRPLRLLSHEVYNRAVDTFRV
SIO_010081: PDMSB3_RS37555
subclass of: SO_0000673
so part of: PDMSB3_RS37555
location: 55031..55423
location: region:55031-55423:1
so has part: feature:55031-55423:1:exon

WP_165190389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55031-55423:1:exon

PDMSB3_RS37560
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37560
old locus tag: PDMSB3_0070
so part of: sequence
location: 55521..56189
location: region:55521-56189:1
so has part: feature:55521-56189:1:exon
subclass of: SO_0000010

position:55521:1
position: 55521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56189:1
position: 56189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55521-56189:1:exon

PDMSB3_RS37560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37560
old locus tag: PDMSB3_0070
inference: COORDINATES: protein motif:HMM:NF025712.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lar family restriction alleviation protein
translation: MTDELYPCAHCGGNWAFGWSQRVTGSRSRPSTEFLQIGSSRAPIMNDMEARSLSEPPMERLCCIVCEDCGMQTPWIVIDQDKNAALDEAGKIWNQRLNRPAATEGELLDLVRKEVSPIDAPYILDLMARTTEEWEKRGPVFAMLAQKVVDGKITTRDFWPIDPVLEDAARYRTLQQMARFVYIDGVASVQFPRIPATGGDEECAFETRVSAAVDDLPDRSRW
SIO_010081: PDMSB3_RS37560
subclass of: SO_0000673
so part of: PDMSB3_RS37560
location: 55521..56189
location: region:55521-56189:1
so has part: feature:55521-56189:1:exon

WP_165190391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55521-56189:1:exon

PDMSB3_RS37565
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37565
so part of: sequence
location: 56264..56404
location: region:56264-56404:1
so has part: feature:56264-56404:1:exon
subclass of: SO_0000010

position:56264:1
position: 56264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56404:1
position: 56404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56264-56404:1:exon

PDMSB3_RS37565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSPVEYIRAAYRHREKLMPQLMTLLALGIIVTYHALTSPALNWLLQ
SIO_010081: PDMSB3_RS37565
subclass of: SO_0000673
so part of: PDMSB3_RS37565
location: 56264..56404
location: region:56264-56404:1
so has part: feature:56264-56404:1:exon

WP_165190393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56264-56404:1:exon

PDMSB3_RS37570
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37570
old locus tag: PDMSB3_0071
so part of: sequence
location: complement(56577..57704)
location: region:56577-57704:-1
so has part: feature:56577-57704:-1:exon
subclass of: SO_0000010

position:56577:-1
position: 56577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57704:-1
position: 57704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56577-57704:-1:exon

PDMSB3_RS37570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37570
old locus tag: PDMSB3_0071
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase domain-containing protein
translation: MSAILNVRAVLRDYRLPADFKGALEQLLLDNVNRVHSRTRVSAKSLSIKTQTVRTQQICRSFEELRQNGYALQSPYSLKQKHVKFLVEFWIREKLSGGSIENKLTYLRALASWIKKPHLVGTLADYADREACSLIRSYVALKDKSWEGNGIDAAAKIAEIELTEPCVAVQLKLQAAFGLRVEESFLLRPGEAVRVQDLLSVTRGTKGGRDRVVPIEFKYEVLEEAAKLANPVTGSTIPLGMTKQQWKWRYYKVLAKHGVQQSGLGVTSHGLRHQFLQQMYERMTGVQAPIKQSVERVDRCTHKEAMQRIVEAAGHSRATKANAYLSTHNALAARKNRSLTREMALEAVAMAGGIKSHAATAMGISRQALYRLLEE
SIO_010081: PDMSB3_RS37570
subclass of: SO_0000673
so part of: PDMSB3_RS37570
location: complement(56577..57704)
location: region:56577-57704:-1
so has part: feature:56577-57704:-1:exon

WP_165190395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56577-57704:-1:exon

PDMSB3_RS37575
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37575
old locus tag: PDMSB3_0073
so part of: sequence
location: 58879..59898
location: region:58879-59898:1
so has part: feature:58879-59898:1:exon
subclass of: SO_0000010

position:58879:1
position: 58879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59898:1
position: 59898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58879-59898:1:exon

PDMSB3_RS37575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37575
old locus tag: PDMSB3_0073
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007585628.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRTRC system protein D
translation: MKVSVFAVDVGYGNTKSAFRMGSDIATQMFPSVAPIAVSDAVSSYGQGVLHSRKVLPIEVDGATYEIGPGVELSSAYGNAGRTLSEDFCLTANYAALLGGSLQFAGVTEVERMVLGLPVHTINKFSAHLRDAFTGTLNFGHGDIRVHSVKVVPQPLGSLVSFSEYGGSRFDRENAHMVIDVGYFTTDWVVAHGFTMNDRRSGGAPGGASQVYKSIASLIAKNEKEPVDDIERIDKCLREKKPLLFYGKDIDLLSYLEQSQAIINSTVKEMQNRVGRTADLRSIVLTGGGAALYEPAIRAAFPRVQLDVLEAPCYANAKGFLIVGEATLARERKALGVAA
SIO_010081: PDMSB3_RS37575
subclass of: SO_0000673
so part of: PDMSB3_RS37575
location: 58879..59898
location: region:58879-59898:1
so has part: feature:58879-59898:1:exon

WP_165190397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58879-59898:1:exon

PDMSB3_RS37580
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37580
old locus tag: PDMSB3_0074
so part of: sequence
location: 59895..60284
location: region:59895-60284:1
so has part: feature:59895-60284:1:exon
subclass of: SO_0000010

position:59895:1
position: 59895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60284:1
position: 60284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59895-60284:1:exon

PDMSB3_RS37580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37580
old locus tag: PDMSB3_0074
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGKAVVKVTLNEATDPDLFAYIKQFDNERMRAGALRALARAALNGGEARRGGSTAPLDAPFARTTDAPTPRRVADVTDVVESGPAPTFSTGAASLAAVQPIEPFAVDPTVTGAKRFDTDAIADQFAGF
SIO_010081: PDMSB3_RS37580
subclass of: SO_0000673
so part of: PDMSB3_RS37580
location: 59895..60284
location: region:59895-60284:1
so has part: feature:59895-60284:1:exon

WP_165190399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59895-60284:1:exon

PDMSB3_RS37585
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37585
old locus tag: PDMSB3_0075
so part of: sequence
location: 60522..60755
location: region:60522-60755:1
so has part: feature:60522-60755:1:exon
subclass of: SO_0000010

position:60522:1
position: 60522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60755:1
position: 60755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60522-60755:1:exon

PDMSB3_RS37585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37585
old locus tag: PDMSB3_0075
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLEKFRNLDPLARRAVIAAALFGLIGIDVLLPKCDFTVAVFMVCGIGFLWAIGILRPFLLMMMLLLKIVFRIKTSPW
SIO_010081: PDMSB3_RS37585
subclass of: SO_0000673
so part of: PDMSB3_RS37585
location: 60522..60755
location: region:60522-60755:1
so has part: feature:60522-60755:1:exon

WP_165190401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60522-60755:1:exon

PDMSB3_RS37590
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37590
old locus tag: PDMSB3_0076
so part of: sequence
location: complement(60830..61051)
location: region:60830-61051:-1
so has part: feature:60830-61051:-1:exon
subclass of: SO_0000010

position:60830:-1
position: 60830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61051:-1
position: 61051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60830-61051:-1:exon

PDMSB3_RS37590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37590
old locus tag: PDMSB3_0076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007582481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKMIVGRFEIIATSGVRNGSVRVGKSDAQAYDVIDRRQTGNVTPEKVGVELDDAWSYCVRHQGRAEGIALLH
SIO_010081: PDMSB3_RS37590
subclass of: SO_0000673
so part of: PDMSB3_RS37590
location: complement(60830..61051)
location: region:60830-61051:-1
so has part: feature:60830-61051:-1:exon

WP_165190403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60830-61051:-1:exon

PDMSB3_RS37595
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37595
old locus tag: PDMSB3_0077
so part of: sequence
location: complement(61155..62240)
location: region:61155-62240:-1
so has part: feature:61155-62240:-1:exon
subclass of: SO_0000010

position:61155:-1
position: 61155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62240:-1
position: 62240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61155-62240:-1:exon

PDMSB3_RS37595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37595
old locus tag: PDMSB3_0077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primase-helicase zinc-binding domain-containing protein
translation: MNVKDLKLSPEQWLALLQKYGVPATSLTGKGAPCPICGGNDRFTYDNKRGRGDWVCRKCNDGSMKAGDGFELICKSAGITFRELMLELDGGVPVAVPSGRSRSGQAPAPGRKADPEWARKRLQSMWDSAIANGRDDLISRYLRARVPGLDVAPSSALRLAMLDYRHEKKVIGKWPGILAAFTLPDGRLGTLHRTFLDRSRPAKASIITNDGEVLPSKMNEVTLNRLNGGAVRLMEPVNGEIGVGEGLETVLGAHMLFRVPVWYCLNRILLSDFVVPEGLGIRVVHIFADFDAADPKTRKSPGVVAALSLAKRLRADGYTAIVHRPKVRGTDFADEWLASRKEPCVPAVPVRIGRTPDALHI
SIO_010081: PDMSB3_RS37595
subclass of: SO_0000673
so part of: PDMSB3_RS37595
location: complement(61155..62240)
location: region:61155-62240:-1
so has part: feature:61155-62240:-1:exon

WP_165190405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61155-62240:-1:exon

PDMSB3_RS37600
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37600
old locus tag: PDMSB3_0078
so part of: sequence
location: complement(62514..63290)
location: region:62514-63290:-1
so has part: feature:62514-63290:-1:exon
subclass of: SO_0000010

position:62514:-1
position: 62514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63290:-1
position: 63290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62514-63290:-1:exon

PDMSB3_RS37600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37600
old locus tag: PDMSB3_0078
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007588669.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTTTFARVLGGIFGVGGNEPSTPAAPAPIVVGQGGCNERQVVIAGEARLFRDEGDVVVQFRPAFDYVLRDTPVGMKLVPSLEPHWAVVSEHQGSLRDAIAAAIRSAASPFPVEADAREIQPRARAPVAPGPATIDIDNEAPALASLAKAPTARRTERSHFGVVKEWGEREFPDGKRPGKTYEAFCLMLEHRGETSVLQGEGLRDAIAEAHCRLGDRVEVRRLGKTKVPAVDKRGQPKLDASGAQILWDKWLWSITKK
SIO_010081: PDMSB3_RS37600
subclass of: SO_0000673
so part of: PDMSB3_RS37600
location: complement(62514..63290)
location: region:62514-63290:-1
so has part: feature:62514-63290:-1:exon

WP_165190407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62514-63290:-1:exon

PDMSB3_RS37605
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37605
old locus tag: PDMSB3_0079
so part of: sequence
location: complement(63301..63735)
location: region:63301-63735:-1
so has part: feature:63301-63735:-1:exon
subclass of: SO_0000010

position:63301:-1
position: 63301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63735:-1
position: 63735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63301-63735:-1:exon

PDMSB3_RS37605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37605
old locus tag: PDMSB3_0079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008649407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METEITAWQLDMFGGDQPILASAPPKPDPLPDPQFWSEAVRDKMVDALVDLATDSRRGDNMPESLMDCCTLLSDRLRNRKKLELDDYRATLGWVMEFWDGALPYRYVCLINGVDPEILQDVIVSNPLLKRDMEDVRRNCFGSLL
SIO_010081: PDMSB3_RS37605
subclass of: SO_0000673
so part of: PDMSB3_RS37605
location: complement(63301..63735)
location: region:63301-63735:-1
so has part: feature:63301-63735:-1:exon

WP_165190409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63301-63735:-1:exon

PDMSB3_RS37610
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37610
old locus tag: PDMSB3_0080
so part of: sequence
location: complement(63844..64155)
location: region:63844-64155:-1
so has part: feature:63844-64155:-1:exon
subclass of: SO_0000010

position:63844:-1
position: 63844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64155:-1
position: 64155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63844-64155:-1:exon

PDMSB3_RS37610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37610
old locus tag: PDMSB3_0080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKQFVMKATQSPLSFLAVCFGLWFAAHSFFAALFVGFVVYRWIKASIRNAMKDEKETSDATAATSATAQPQAEAVKAAAVTPIKRQYAKSPVVVPLKTGTDE
SIO_010081: PDMSB3_RS37610
subclass of: SO_0000673
so part of: PDMSB3_RS37610
location: complement(63844..64155)
location: region:63844-64155:-1
so has part: feature:63844-64155:-1:exon

WP_165190411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63844-64155:-1:exon