Paraburkholderia dioscoreae strain Msb3 plasmid pII.
type: Entry
definition: Paraburkholderia dioscoreae strain Msb3 plasmid pII.
sequence version: NZ_LR699556.1
sequence date: 2022-12-12
sequence: sequence
division: CON
label: NZ_LR699556.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA5871251
keyword: RefSeq
source: Paraburkholderia dioscoreae
organism: Paraburkholderia dioscoreae
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR699556.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/12/2022 08:12:22\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,542\nCDSs (total) :: 7,456\nGenes (coding) :: 7,321\nCDSs (with protein) :: 7,321\nGenes (RNA) :: 86\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 64\nncRNAs :: 4\nPseudo Genes (total) :: 135\nCDSs (without protein) :: 135\nPseudo Genes (ambiguous residues) :: 0 of 135\nPseudo Genes (frameshifted) :: 55 of 135\nPseudo Genes (incomplete) :: 108 of 135\nPseudo Genes (internal stop) :: 11 of 135\nPseudo Genes (multiple problems) :: 34 of 135\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 93611
topology: linear
so has quality: SO_0000987
location: 1..93611
location: region:1-93611:1
RO_0002162: 2604047

NZ_LR699556
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA5871251
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Herpell B, J.
journal: Submitted (18-AUG-2019) UNIVERSITY OF VIENNA, Department of Ecogenomics and Systems Biology, UZA I, Althanstrasse 14, 1090 Vienna, Austria

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:93611:1
position: 93611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-93611:1:source
so part of: sequence
organism: Paraburkholderia dioscoreae
mol type: genomic DNA
strain: Msb3
isolation source: leaf
type material: type strain of Paraburkholderia dioscoreae
plasmid: pII

2604047
type: Taxonomy
SIO_000068: taxonomy

PDMSB3_RS36860
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36860
old locus tag: PDMSB3_0001
so part of: sequence
location: <1..1629
location: region:1-1629:1
so has part: feature:1-1629:1:exon
subclass of: SO_0000010

position:1629:1
position: 1629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1629:1:exon

PDMSB3_RS36860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36860
old locus tag: PDMSB3_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008344699.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MTNAPDLKRVPHAVQGYIHDLEERVAGDTKRIGELSQRIEQLEEQVRLLQSERYAPKSEKRQDRMFDEAEQLASEPSDEDAGPGLPDTGLPTIGQPERSKAGRKPLPAYLKRERVEYDLPEEQRGCPCCGNPMHRIGEDVSEQLHVEVKWTVRQNARAKYACRHCERHAEHTPVVLAPMPVQPIPGSHADASVIATVATAKYVDGMPLYRMQAALARWQIPVSRGTLAQWVIRPSELHYRRLYDALYRTLLSQPLIHGDETTLQVLNEPGRAAQSKSYAWVYRSAQDCAEPVVLFEYQPGRGQTHPQKFLGDYSGMLMSDGYSAWRTLKKATHFGCMAHARRLFVKADKAAQQKGDDGKPKAPNARVAKALEYFQALYRVEALAKGNLPAGQTRADYTYRLRQQHSAPVLETFKAWLDELAPKMVPQSLLGKAIAYTRNQWEYLARYATDGRAPIDNNVCERDIRPFATSRKSWLFSDTVDGAKASATIYSLVLTCRACGVEPYDYLLHVLTELPQRAPDADVTDLLPFNYARQQQVATGSG
SIO_010081: PDMSB3_RS36860
subclass of: SO_0000673
so part of: PDMSB3_RS36860
location: <1..1629
location: region:1-1629:1
so has part: feature:1-1629:1:exon

WP_165187048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1629:1:exon

PDMSB3_RS36865
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36865
old locus tag: PDMSB3_0002
pseudo: true
so part of: sequence
location: <1751..2308
location: region:1751-2308:1
so has part: feature:1751-2308:1:exon
subclass of: SO_0000010

position:1751:1
position: 1751
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2308:1
position: 2308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1751-2308:1:exon

PDMSB3_RS36865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36865
old locus tag: PDMSB3_0002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018417454.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 2
transl table: 11
product: transposase
SIO_010081: PDMSB3_RS36865
subclass of: SO_0000673
so part of: PDMSB3_RS36865
location: <1751..2308
location: region:1751-2308:1
so has part: feature:1751-2308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1751-2308:1:exon

PDMSB3_RS36870
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36870
old locus tag: PDMSB3_0003
pseudo: true
so part of: sequence
location: complement(<2328..3392)
location: region:2328-3392:-1
so has part: feature:2328-3392:-1:exon
subclass of: SO_0000010

position:2328:-1
position: 2328
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:3392:-1
position: 3392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2328-3392:-1:exon

PDMSB3_RS36870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36870
old locus tag: PDMSB3_0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010959400.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: PDMSB3_RS36870
subclass of: SO_0000673
so part of: PDMSB3_RS36870
location: complement(<2328..3392)
location: region:2328-3392:-1
so has part: feature:2328-3392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2328-3392:-1:exon

PDMSB3_RS36875
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36875
old locus tag: PDMSB3_0004
so part of: sequence
location: 3727..4320
location: region:3727-4320:1
so has part: feature:3727-4320:1:exon
subclass of: SO_0000010

position:3727:1
position: 3727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4320:1
position: 4320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3727-4320:1:exon

PDMSB3_RS36875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36875
old locus tag: PDMSB3_0004
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLRELQQHKRAITVDGVVKESRPVGCASPSWLACYPNFQDALRGGETSFRALPHFAKLPILKRTSTNPEAQAVVTSVILNEVRAAYVELNTTCVVEAVESYLSVGMHSENLQNIRSTILDTVVAQFPHVTVPQVARPPCLLSPGKGIFLDGWQRFFAYLSRDDKTIPLLAVDWPVLYERLASNPPEDGKTATNLPR
SIO_010081: PDMSB3_RS36875
subclass of: SO_0000673
so part of: PDMSB3_RS36875
location: 3727..4320
location: region:3727-4320:1
so has part: feature:3727-4320:1:exon

WP_165190169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3727-4320:1:exon

PDMSB3_RS36880
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36880
so part of: sequence
location: 4808..5590
location: region:4808-5590:1
so has part: feature:4808-5590:1:exon
subclass of: SO_0000010

position:4808:1
position: 4808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5590:1
position: 5590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4808-5590:1:exon

PDMSB3_RS36880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATTDANGNYQVPLAGLTAPFAIFATDPSGAAQPLTSVVASVPTSSSGPVIANVTTLTTAVSALMTQSGNPFDLADSKTLSTLVTPASVAGAVKTLNAALSRILRANNVDSKSFDPIATPFPANQTRPDAVIDTVQVIPATGSPGGLQLISNANPNSSAKLVLNSSASVAAPLPVPPADAVFSTQGSGPMDNIMGYGQGTGYAASVIYSMSVTAGIDQNGAQGCTTACSFAAVVLGIDRSLELDSNYGPISLGAYWGYSD
SIO_010081: PDMSB3_RS36880
subclass of: SO_0000673
so part of: PDMSB3_RS36880
location: 4808..5590
location: region:4808-5590:1
so has part: feature:4808-5590:1:exon

WP_165190171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4808-5590:1:exon

PDMSB3_RS36885
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36885
old locus tag: PDMSB3_0007
so part of: sequence
location: complement(5683..6312)
location: region:5683-6312:-1
so has part: feature:5683-6312:-1:exon
subclass of: SO_0000010

position:5683:-1
position: 5683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6312:-1
position: 6312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5683-6312:-1:exon

PDMSB3_RS36885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36885
old locus tag: PDMSB3_0007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020066993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSLRLHFWSITGTLIAFLISLWINQEVFTHTSFVRGINWIFLPSGVRLLSTLLVGFDGFVGLLVGGLLMDFFYWFPHDPVRAIAGAILGSMAPYLVYRLALERYELKASLTNLTPKRLLVLSVVYSVANPLLHHIWFALRGNMQNIAESFFMMFVGDLTGALIMLYTMKGILALLPKQPSNSRMSNRMFSIQLALSSAYTNQLATKPT
SIO_010081: PDMSB3_RS36885
subclass of: SO_0000673
so part of: PDMSB3_RS36885
location: complement(5683..6312)
location: region:5683-6312:-1
so has part: feature:5683-6312:-1:exon

WP_165190301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5683-6312:-1:exon

PDMSB3_RS36890
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36890
old locus tag: PDMSB3_0008
so part of: sequence
location: 6422..6769
location: region:6422-6769:1
so has part: feature:6422-6769:1:exon
subclass of: SO_0000010

position:6422:1
position: 6422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6769:1
position: 6769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6422-6769:1:exon

PDMSB3_RS36890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36890
old locus tag: PDMSB3_0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012214169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MTRPADIYLRFLQLTEALRGLPMLAALDPLEERILEFVARATRAKDRLSVRDMMAQSELGSPATLHARITSMREKGWIMLSDTEDARRKQIELTQAALRHFDKLGEAFTKAAKGT
SIO_010081: PDMSB3_RS36890
subclass of: SO_0000673
so part of: PDMSB3_RS36890
location: 6422..6769
location: region:6422-6769:1
so has part: feature:6422-6769:1:exon

WP_165190173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6422-6769:1:exon

PDMSB3_RS38135
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS38135
old locus tag: PDMSB3_0009
pseudo: true
so part of: sequence
location: complement(6804..>6976)
location: region:6804-6976:-1
so has part: feature:6804-6976:-1:exon
subclass of: SO_0000010

position:6804:-1
position: 6804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6976:-1
position: 6976
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6804-6976:-1:exon

PDMSB3_RS38135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS38135
old locus tag: PDMSB3_0009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004554083.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: porin
SIO_010081: PDMSB3_RS38135
subclass of: SO_0000673
so part of: PDMSB3_RS38135
location: complement(6804..>6976)
location: region:6804-6976:-1
so has part: feature:6804-6976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6804-6976:-1:exon

PDMSB3_RS36900
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: istB
locus tag: PDMSB3_RS36900
old locus tag: PDMSB3_0010
so part of: sequence
location: complement(7057..7893)
location: region:7057-7893:-1
so has part: feature:7057-7893:-1:exon
subclass of: SO_0000010

position:7057:-1
position: 7057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7893:-1
position: 7893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7057-7893:-1:exon

PDMSB3_RS36900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: istB
locus tag: PDMSB3_RS36900
old locus tag: PDMSB3_0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012431280.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MTPQLERLTVLCKQLNLLHLPTQIAHLGQMAAKRELGYLDFLEQALKDEAMARAERMRRMLTRLAGFPAIKTLDEFDFEFALGVPKALVLELGSLAFVERAENVVLLGPSGVGKTHLAVALGYRATQAGFRTRFITAADLLMQLTTALRRNQLEETIKRITKPYRLLIIDEMGYLPMDREQANLLFQVVAKRYETGSLILTSNLPFGQWDQTFADDATLTAALLDRLLHHAHVVPISGDSYRLKEKRQAGMINRIPPPHLNDADDVKRKRNSKEAALS
SIO_010081: PDMSB3_RS36900
subclass of: SO_0000673
so part of: PDMSB3_RS36900
location: complement(7057..7893)
location: region:7057-7893:-1
so has part: feature:7057-7893:-1:exon

WP_007176182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7057-7893:-1:exon

PDMSB3_RS36905
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: istA
locus tag: PDMSB3_RS36905
old locus tag: PDMSB3_0011
so part of: sequence
location: complement(7890..8936)
location: region:7890-8936:-1
so has part: feature:7890-8936:-1:exon
subclass of: SO_0000010

position:7890:-1
position: 7890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8936:-1
position: 8936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7890-8936:-1:exon

PDMSB3_RS36905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: istA
locus tag: PDMSB3_RS36905
old locus tag: PDMSB3_0011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011000214.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MEIEILRRQGNSLRDIAVETGMAVNTVRKYLESGPPQRKARQPVVGKLAPFKAYLQGRVEAAKPDWIPATVLKREIEERGYTGGLRRVQEYLQKLRPAARPDPVVRFETEPGHQMQMDWIEFRKPGHKLGMLAAFVATLGYSRVSYAEFVTDMRIETLLACHVRAFEAFGGVTREIVYDNMKTVILKRDAYGKKQHRYHPGFADFAKHHGFVPRVCKPYRAKTKGKVERMNGYLRYSFWVPLVSMLKQAGLTADCGLCNERVRLWLRDVANVRVHGTTKRVPAEVLLEERPHLLPLPAPYVGRSVRTGATPHQQPKPASRYATSEWNKPLQHPLSVYDAFSRAQEVSA
SIO_010081: PDMSB3_RS36905
subclass of: SO_0000673
so part of: PDMSB3_RS36905
location: complement(7890..8936)
location: region:7890-8936:-1
so has part: feature:7890-8936:-1:exon

WP_039339357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7890-8936:-1:exon

PDMSB3_RS38140
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS38140
old locus tag: PDMSB3_0012
pseudo: true
so part of: sequence
location: complement(<9216..9492)
location: region:9216-9492:-1
so has part: feature:9216-9492:-1:exon
subclass of: SO_0000010

position:9216:-1
position: 9216
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:9492:-1
position: 9492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9216-9492:-1:exon

PDMSB3_RS38140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS38140
old locus tag: PDMSB3_0012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012214169.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
SIO_010081: PDMSB3_RS38140
subclass of: SO_0000673
so part of: PDMSB3_RS38140
location: complement(<9216..9492)
location: region:9216-9492:-1
so has part: feature:9216-9492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9216-9492:-1:exon

PDMSB3_RS36910
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36910
old locus tag: PDMSB3_0013
so part of: sequence
location: complement(9529..9849)
location: region:9529-9849:-1
so has part: feature:9529-9849:-1:exon
subclass of: SO_0000010

position:9529:-1
position: 9529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9849:-1
position: 9849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9529-9849:-1:exon

PDMSB3_RS36910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36910
old locus tag: PDMSB3_0013
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLMEGAENTDSLSFATVKDWQIDATSQHVAMRLSVEGASEVSIAAGEHGFLLAPEQARQIIRDLSAAVLAMDVKMLAGREDANDSNANLREEADSDRYDETVFAS
SIO_010081: PDMSB3_RS36910
subclass of: SO_0000673
so part of: PDMSB3_RS36910
location: complement(9529..9849)
location: region:9529-9849:-1
so has part: feature:9529-9849:-1:exon

WP_165190175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9529-9849:-1:exon

PDMSB3_RS36915
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36915
old locus tag: PDMSB3_0014
so part of: sequence
location: complement(10114..11544)
location: region:10114-11544:-1
so has part: feature:10114-11544:-1:exon
subclass of: SO_0000010

position:10114:-1
position: 10114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11544:-1
position: 11544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10114-11544:-1:exon

PDMSB3_RS36915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36915
old locus tag: PDMSB3_0014
EC number: 2.7.7.13
EC number: 5.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008920857.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
translation: MQIHPVILCGGSGTRLWPMSRGGYPKQYLKLTGENTLVQQTALRLRGVADIAAPIVVTNNEQRFLVAEQLRQVDVASSAIVLEPVSRNTAAAIAVSALLALRDSPESLLLVLPSDHVIADEPAFVKAARAAAQIAKDGYLVTFGITPTEPHTGYGYIRAGAALVDGASTFAVDSFVEKPDAATARRFIVEGGYYWNSGMFMLKASTYMEELRCYEPEIALQAELSLKAAQHDNDFVRLDAQAFAASPNISVDHAVMEKTRRAAVVAVANLGWNDIGSWTALAGIAERDTQGNAQIGDVFTDAVTNSYIRAEHRLVAAIGLDNVVIVETADAVLVAHRDQAQDVKKIVEQLNTLGRHESVTHRRVVRPWGSYEGIDSGDRFQVKRIVVSPGAQLSLQMHHHRAEHWIVVKGTALVTNGDKEIILTENQSTYIPLGITHRLLNPGKIPLELIEVQSGAYLGEDDIVRFEDTYGRAPKA
SIO_010081: PDMSB3_RS36915
subclass of: SO_0000673
so part of: PDMSB3_RS36915
location: complement(10114..11544)
location: region:10114-11544:-1
so has part: feature:10114-11544:-1:exon

WP_165190177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10114-11544:-1:exon

PDMSB3_RS36920
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36920
old locus tag: PDMSB3_0015
so part of: sequence
location: complement(11692..12375)
location: region:11692-12375:-1
so has part: feature:11692-12375:-1:exon
subclass of: SO_0000010

position:11692:-1
position: 11692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12375:-1
position: 12375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11692-12375:-1:exon

PDMSB3_RS36920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36920
old locus tag: PDMSB3_0015
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008920856.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MYAVQAERTEGRHRHSEPGLLRFRPARPEDAEACAPLIFTSGVREFGFFLGVLPWTCIEFLEFAFTSKRGRFSYRRHRVAVTDDDRVVAVLAVHDGRQTWFDDPHVALMLLLFFGVRRTVRMLLRGLVLESELPAPKSSQTLIAHCATDELRRGTGVFSALFMNALHTGLIHGDGGQQIVLDVLVSNTRAYDLYRRLGFVELPRRGPLAQRLPRELESVRMQFAGRT
SIO_010081: PDMSB3_RS36920
subclass of: SO_0000673
so part of: PDMSB3_RS36920
location: complement(11692..12375)
location: region:11692-12375:-1
so has part: feature:11692-12375:-1:exon

WP_165190179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11692-12375:-1:exon

PDMSB3_RS36925
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36925
old locus tag: PDMSB3_0016
so part of: sequence
location: complement(12391..13728)
location: region:12391-13728:-1
so has part: feature:12391-13728:-1:exon
subclass of: SO_0000010

position:12391:-1
position: 12391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13728:-1
position: 13728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12391-13728:-1:exon

PDMSB3_RS36925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36925
old locus tag: PDMSB3_0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004194209.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
translation: MGLGNHIRQQLAAKALMRQLERVSEEVKTPGAPLAVSGTRAAQDASRAALCSFETMPGYQQVEILRQMSEKLQVQSPFFRVHEGMAGATTRIGGAEYLNYANYNYLGLAGDPLVSGRAKEAIDRYGTSASASRMVAGERPVQRELETALASFYEADDCVVFVSGHATNVTVIGSLFGQGDLIVHDSLAHNSIVQGAQLSGAKRLSFPHNDWQALDALLARVRHDYRRVLIAIEGLYSMDGDIPDLAQFVAIKHRHAAFLMVDEAHSLGVLGARGKGVREHCEVASADVDIWMGTLSKTLAGCGGFIAGSQALVDILRHLAPGFLYSVGLAPSLAAASLAALERLIAEPERVVLLRARGKQFLDEARAAGLDTGKSAGYAVVPIITGSTLKAAQWANAMFADGINVQPIFYPAVEEKAARLRFFICSTHEPEQISRTIAALRRLPR
SIO_010081: PDMSB3_RS36925
subclass of: SO_0000673
so part of: PDMSB3_RS36925
location: complement(12391..13728)
location: region:12391-13728:-1
so has part: feature:12391-13728:-1:exon

WP_165190181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12391-13728:-1:exon

PDMSB3_RS36930
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36930
old locus tag: PDMSB3_0017
so part of: sequence
location: complement(13772..14686)
location: region:13772-14686:-1
so has part: feature:13772-14686:-1:exon
subclass of: SO_0000010

position:13772:-1
position: 13772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14686:-1
position: 14686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13772-14686:-1:exon

PDMSB3_RS36930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36930
old locus tag: PDMSB3_0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010116897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-3-O-acyl N-acetylglycosamine deacetylase
translation: MRPPAGWSHREGTLGRPLALSGHGLHTGRRVNVSILPGNAGSARGIVFRRIQDGRVLAELPVSPALRRGQPLCTMLEASGGVRVRTIEHLLASLLTCEIDRATVELDAEEVPILDGSARPWIDAIRACGRVELPDAKRFIRVLRPVKIADGEGTRDERSISIEPSRVYEMTVRNDLKGFGVLRWDGVLTPASFADEIAPSRSYGRVKWAIPAILAGYVRGMPILRGARLSCTAAIVGNRVVGGMRVPDEFVRHRVLDLVGDMAMAGSPLIGRVCALRPSHEMNYRLVAELLATRDAWEWAEFTA
SIO_010081: PDMSB3_RS36930
subclass of: SO_0000673
so part of: PDMSB3_RS36930
location: complement(13772..14686)
location: region:13772-14686:-1
so has part: feature:13772-14686:-1:exon

WP_165190183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13772-14686:-1:exon

PDMSB3_RS36935
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36935
old locus tag: PDMSB3_0018
so part of: sequence
location: complement(14686..22344)
location: region:14686-22344:-1
so has part: feature:14686-22344:-1:exon
subclass of: SO_0000010

position:22344:-1
position: 22344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14686-22344:-1:exon

PDMSB3_RS36935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36935
old locus tag: PDMSB3_0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011402028.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I polyketide synthase
translation: MTKQIAIVGMACRFPGHVESPEDFWTLLRDEKDAVTQVPTDRFGTEFYQHPSKREAGKSYTFSAGVLDDVAGFDAPFFGISPREAQQMDPQQRLLLELAWETFEDAGVRPRDMEGSNCAVYVGVASPDYGNRFVDDLNAIDPYSATGNTLSIAANRLSYLFDLRGPSVSVDTACSSSLVALHQACQALQSGDAEMALAGGVNLLLHPFGFVTFSKASMLSPRGRCRAFDASGDGYVRSEGGALVMLKTLERALADGDTIHAVIAGSGVNSDGYSQGGISVPGAATQAALLRTVYKRAGIDPRSLAYVEAHGTGTAVGDPIEARALMEVASAGRPVDRPLLIGSVKTNVGHLETASGMAGLMKAILCLKHRAVPKTLHFETPNPAIDFVGGRLRVVDRLTPLDSGAEPLVIGVNSFGFGGTNAHIVLREAPAQAMAEERVESVDTTLPPLILSTRSQAALSALAARYLSMLHNGTPWATLASNAAHRRQWLKHRAILAPSTESEARAILAALAAPTPEQTEPALVQGEAPGDDTRLALVFSGNGAQWAGMGKQLLEQESVFRAALDELDALWRADGSPSLVEVLRDGVSAEWLESTEHAQPLLFALQVGVVRVIEARGVGYDVCLGHSVGEVAAAWAAGALTLKQAVHVIKIRSRAQGSTRGMGRMAAAGLGEGAMRALMAQVGVDGAVEIAGANSPQAVTLAGPLAALQILEAAVKESGRFFQMLELDYAFHSRQMDPIEPSVLHGLADLVPKVAARSFVSTVTGAELAGTALDAHYWWRNIREPVRFGDAIAQVAQSGVRLFLEVGPHSILRSYVTQTLDEAHVSGRSLPTLKRNHDSAQMLHHAIYAALANGARVDAERFAPAGARVALPSYPWQHEHYWLGPTPEAYNLVNRRREHPLLGYRLREHALAWENQLDPAGLPMLADHVVDGGVAFPGAGYVEMALAAARVHFGTDSAAVENLEIRLPVVFQPQHSKLFRFTVDVRTSGFTIETRDRMSDEAWSLNVTGRLLASGCALSTEGDARALPAITLTGLFAQPAMCGTTLYANTTAIGLSYGPAFQWVRAVHVDANADMALAEVEVPAVLAQTESELSAYALHPALMDSGFHPLFALLASADPAGTEHAAYVPVQIGRIDYLRGDAVRYVVARIERRSPHSVVASFDFADAHGAIVARLGACRFRRVDLMGRRHHAPARYAYIVEAKPLDADRGARMLPEPTALLEDAAAALAAQEDQSRRQAHLTEMLPLLDVLASAYALNALDAINVFAEPSLPDCAHPALLTRLVQIVVEDGLAQRDGTRLVRDAVACANLPGIDELWRDLLAQSPAHVAELTLLAHCGAALPAVLRGEVSGAQILPPSRSSLVEHFFEASPTWAHVNALTGACLHRAIEGWSEPRRLRVLELDSPSSDVLQPLAMHMPVPRCDYTIAGTHEQLSGFDASEHPSVRIANIEFGDAPRLSGIEAGERYDIVVASHVLAAQTEPRALLAALRGWLAPGALVVIAEPRNSRFADIVFDLDADAAHANARRAAWLSPVALAKHLEEAGFDQVTRHTEQGLDLEGAPTLIVAREPLTGASAGNETGAQTPPPAHWSLLYAAETGADDTLAAALQAAGHTTSNSTLKVLRHDMSKLAAPAGRPHHVVFIAPDQTLSADADGADVMHAQQQTSLALAQLVRDLVAVAEVMQPQLWIVTRGGAPVVTPFADAVALRPEQAAMWGLGRVLANEHPELSCRLIDVSPACRDADAELARELLASDGEEEVLLTSQGRYVLRMLPAASAALRSESATPVCPRNEAAVLGFASPGSLRNLEWFALPQRELSANEVEIEPVATGLNFRDVMYAMGLLSDEAVENGFAGATIGMELSGRVARVGRDVRRFAPGDAVLGFAPASFASLVHTKAEAIAHKPERLTFEEAATVPTTFFTAYYALCELARLRRGERVLVHGAAGGVGIAAIQLARHLGAEVFATAGSREKREFVRLLGADHVFDSRSLAFADEIRERTQG…
SIO_010081: PDMSB3_RS36935
subclass of: SO_0000673
so part of: PDMSB3_RS36935
location: complement(14686..22344)
location: region:14686-22344:-1
so has part: feature:14686-22344:-1:exon

WP_165190185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14686-22344:-1:exon

PDMSB3_RS36940
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36940
old locus tag: PDMSB3_0019
so part of: sequence
location: complement(22341..23876)
location: region:22341-23876:-1
so has part: feature:22341-23876:-1:exon
subclass of: SO_0000010

position:22341:-1
position: 22341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23876:-1
position: 23876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22341-23876:-1:exon

PDMSB3_RS36940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36940
old locus tag: PDMSB3_0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018437969.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LTA synthase family protein
translation: METTLALSFAAAAGLALLPEAIAVPRASLRRSPIAFALHIAAIVFICLCLLLVTGRVRFSAFVAIALVALLAGVSNAKYASLREPFVFTDLSLFSQLFAHPRLYLPFLSAGTVAAIVVGIAVVIGGFVADKPMASRPLGAIAIAAAACLAAAYLLATRLPLILNPCDDQKRHGFFAVFIAYLLNGMKPATSRQLRNALATGPFATGAPRSTPDVILIQSESFFDARRLTESITPAILHHFDTARRESVQHGELTVPAWGANTMRTEFAVLTGIEGAQLGYARFYPYAFVRRACVSLASWFKQGGYQTKAIHPYYADFFGRERAFKHLQIDSFLDIKSFADAHRAGPYVADMAVAESITEALDEPRDKPAFIFAMTMENHGPLHLEPVQAGEGAAFHTLGDDARWRDLTAYLRHLANADAMLGRLLSALRARRRDTLLCFYGDHVPALPHVFSELGCKPARSDYIIWRNYGDAPATNKDLGAEQLGLTLIRALEPGLPSTESARTLHPTTER
SIO_010081: PDMSB3_RS36940
subclass of: SO_0000673
so part of: PDMSB3_RS36940
location: complement(22341..23876)
location: region:22341-23876:-1
so has part: feature:22341-23876:-1:exon

WP_165190187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22341-23876:-1:exon

PDMSB3_RS36945
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36945
old locus tag: PDMSB3_0020
so part of: sequence
location: complement(23877..24671)
location: region:23877-24671:-1
so has part: feature:23877-24671:-1:exon
subclass of: SO_0000010

position:23877:-1
position: 23877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24671:-1
position: 24671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23877-24671:-1:exon

PDMSB3_RS36945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36945
old locus tag: PDMSB3_0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009904087.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MTEMAEPAQRFIIITGASAGIGRALALAYAQPGMTLGLIGRNESRLQACADACCAKGATVITGLLDVRNAQAMQAWLEAFDENHPIDLLIVNAGVASTLASVDDWEARERTATIVDTNFYGAMHAALPVIDRMRTRGHGQIALISSIAALRGMAISPAYCASKAALKAWGDSVRPILARDGIRVSVVLPGFVKTAMSDVFPGDKPFLWSADKAAQHIQRKLKAGRAEIAFPTLPAFGMRLLPLLPAAIADAILDGLSYLPREER
SIO_010081: PDMSB3_RS36945
subclass of: SO_0000673
so part of: PDMSB3_RS36945
location: complement(23877..24671)
location: region:23877-24671:-1
so has part: feature:23877-24671:-1:exon

WP_165190189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23877-24671:-1:exon

PDMSB3_RS36950
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36950
old locus tag: PDMSB3_0021
so part of: sequence
location: complement(24664..25869)
location: region:24664-25869:-1
so has part: feature:24664-25869:-1:exon
subclass of: SO_0000010

position:24664:-1
position: 24664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25869:-1
position: 25869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24664-25869:-1:exon

PDMSB3_RS36950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36950
old locus tag: PDMSB3_0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009889311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: capsular biosynthesis protein
translation: MRRSFLALQGTASPFFARLAVALRSRGHVVRRVNFCGGDVVYGNDTEGWNYTGKSEDLGDWYRALLGGQQFTDIMMFGDCRAIHTPMHPLAAEAGVDVHVFEEGYVRPHWLTLESHGVNGRSLMSRDPGWYLEQRKLMPPSVPPKATGYNLQERAYHDIRYRVANTLYSARFPHYRSHRPRNGLSEYSGLARRAMIQRRHHRNAEAVTRSLLDSQAAYYLFPLQLNSDSQIVVHSPFDGVRDAIAKVMRSFASNAPGDAKLVIKNHPLDTGLFDYKRYSESLAGELGMRDRLHFIDAGHLPTLLEHAKSAVVVNSTVGLSALHHRCPLIALGTAIYDIAGLTWQGSIDDFWRLAEAPDVNLYEAFLDYVIHHTQINGDFYTRTGIEMAVQGAVRRLELAHD
SIO_010081: PDMSB3_RS36950
subclass of: SO_0000673
so part of: PDMSB3_RS36950
location: complement(24664..25869)
location: region:24664-25869:-1
so has part: feature:24664-25869:-1:exon

WP_165190191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24664-25869:-1:exon

PDMSB3_RS36955
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36955
old locus tag: PDMSB3_0023
so part of: sequence
location: complement(26254..27696)
location: region:26254-27696:-1
so has part: feature:26254-27696:-1:exon
subclass of: SO_0000010

position:26254:-1
position: 26254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27696:-1
position: 27696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26254-27696:-1:exon

PDMSB3_RS36955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36955
old locus tag: PDMSB3_0023
inference: COORDINATES: protein motif:HMM:NF016145.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide pyruvyl transferase family protein
translation: MLNNSLGKIKSIGAEEFSFTPKGVKGYAIVGPYHSLPAGNYKVEFGFADVDPDHGREDDIVAIVDVTYNFGRETVARREILHRDLTGCEQRAFALDFSIKSTENMEFRVLVTGARDLATRLRRRISFNGKSIDFPPTINEAPAQDARHFSPYLSLDRAIIDGDGKVPMFWVTGHSETSFGNFGDALSPVVVEALSGLSSHHQSPNESLVRLVTAGTVLNWQESGYIHVWGTGLDPAYDHSHQLTQHGYKKPRHLNMRVHAVRGALTRKTLLDVGIDCPAVFGDPGWLLPKIVPPSDEKTYELGIIPHISDFESQTPTSSILERLKRYDIGNESGIKIISTRHAPTWEGFVDKIREITSCQRIISTSFHGLIVPQAYGIPAILFSKKKNDCLGSGDLLDEYSHIDHRVRDFMLGAGYTSLPMYSRCDSEMTDWDDVIKSIDKAAEPVIIDATPFIESFPLHLLPPEKRWRITGERAGQIRF
SIO_010081: PDMSB3_RS36955
subclass of: SO_0000673
so part of: PDMSB3_RS36955
location: complement(26254..27696)
location: region:26254-27696:-1
so has part: feature:26254-27696:-1:exon

WP_165190193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26254-27696:-1:exon

PDMSB3_RS36960
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36960
old locus tag: PDMSB3_0024
so part of: sequence
location: complement(27803..28450)
location: region:27803-28450:-1
so has part: feature:27803-28450:-1:exon
subclass of: SO_0000010

position:27803:-1
position: 27803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28450:-1
position: 28450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27803-28450:-1:exon

PDMSB3_RS36960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36960
old locus tag: PDMSB3_0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006025394.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIALRNLNKYYRTRAGRRHVLNDISFSLEKGERIGILGRNGAGKSTLIRMIGGAELPSSGQIERRMSVSWPLAFNGGFQGSLTGFDNIRFICRVYEADYHTVLPFIEEFTELGQYLREPLKTYSSGMSARLAFGLSMAIEFDCFLIDEVISVGDSNFHRKCQRELFEKRSDRAMIVVSHDPHLIREHCSKASVLRAGRLHHFPTLDDAYAFYENS
SIO_010081: PDMSB3_RS36960
subclass of: SO_0000673
so part of: PDMSB3_RS36960
location: complement(27803..28450)
location: region:27803-28450:-1
so has part: feature:27803-28450:-1:exon

WP_165190195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27803-28450:-1:exon

PDMSB3_RS36965
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36965
old locus tag: PDMSB3_0025
so part of: sequence
location: complement(28447..29250)
location: region:28447-29250:-1
so has part: feature:28447-29250:-1:exon
subclass of: SO_0000010

position:28447:-1
position: 28447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29250:-1
position: 29250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28447-29250:-1:exon

PDMSB3_RS36965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36965
old locus tag: PDMSB3_0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013831335.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MPSYVGTSFYRSLQIQGRVLFALLMREIITRYGRHNIGFAWLFAEPMLFTSGIAALWTLLKEGGATSHHINVIAYAITSYSTVLVWRNTISRCTLAIEPNMSLLVHRNVRPIDFFIARVVLELAGSSLSALAMLSMFIVIGVIPAPVDILTMLKGWFVLCWYSAAMAFLIGGLTEYSDLVEKLWHPIAYFQLPLSGVFAMAAWLPPKLRHIVLLFPVPNAVEVFRLGYFGDMIRPYYDMKYTCTVCLVLTWLGLLVVSGASRRLDAK
SIO_010081: PDMSB3_RS36965
subclass of: SO_0000673
so part of: PDMSB3_RS36965
location: complement(28447..29250)
location: region:28447-29250:-1
so has part: feature:28447-29250:-1:exon

WP_165190197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28447-29250:-1:exon

PDMSB3_RS36970
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36970
old locus tag: PDMSB3_0026
so part of: sequence
location: complement(29253..30347)
location: region:29253-30347:-1
so has part: feature:29253-30347:-1:exon
subclass of: SO_0000010

position:29253:-1
position: 29253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30347:-1
position: 30347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29253-30347:-1:exon

PDMSB3_RS36970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36970
old locus tag: PDMSB3_0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006025396.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRLKRVNWLFALTVLVPTALASIYYGFVASDVYVSESRFVVRSAQQQPQMSMMGQLLSGSGYSQVDQDTYPVIDYVESRDALKELNGNDFILNHYSRFGDFISRFHVGLDNSFEALWRYYSKHIIAIDVDDTSGITILRVKAYNAEDARNISVSLIRMAERLINKMNERAATDTVSLAQQEVKEASVRSREAAVALAAYRNSHSIFDPDRQSAMRLQQVTLLQTQLFSAQSQLSQIEAVSPQNPQIPVLRKNIDLIQKQIDVTTGAVAGKQDSLSQKMTDFERLQLDSEFADKQLASTMAALENARSGAARKQLYLEELVQPNFPDVAIEPKRIRNIATVFALGLICWGTLSLLIASVREHRD
SIO_010081: PDMSB3_RS36970
subclass of: SO_0000673
so part of: PDMSB3_RS36970
location: complement(29253..30347)
location: region:29253-30347:-1
so has part: feature:29253-30347:-1:exon

WP_232064482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29253-30347:-1:exon

PDMSB3_RS36975
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36975
old locus tag: PDMSB3_0027
so part of: sequence
location: complement(30604..35955)
location: region:30604-35955:-1
so has part: feature:30604-35955:-1:exon
subclass of: SO_0000010

position:30604:-1
position: 30604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35955:-1
position: 35955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30604-35955:-1:exon

PDMSB3_RS36975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36975
old locus tag: PDMSB3_0027
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024831.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MRIVIDLQSCQNGSRHRGIGRYAMSIAKAMIRVGSVHEFLILLTDRFPNTIESIRKELEGYVPQDRILVCSLFEGTTAADPNNAWRNHAAETLRSAFITRLEPDMVFIPSLFEGFWDDTVVSVDPAPYPTAVTLHDLIPLEEPERYIPARNDQDAYFRRLRDAKRADLLIAISAFVAEEARQRMAADPDRVVVAYNGIDERFRRPVHGSIDRADLMKRMGIARPFIFNTSPLEYRKNLEGLIAAFASMSKAVREEHQLVIAGKMDDYARKYLNGLAKAEGLPADTIVLPGYVSDEDLIALYSECSLFSFPSWSEGFGLPPLEAMACGTPVIVANTTSLPEVVGREDLQADPSKPPEMGAAMERVLTNSSLRNELVAFGIERSKEFTWERPARIILAEFERVHVERQAYRAADASLSARPRVAFVCPQMDSISHVGGRIAGLVSALARVCHVTLIASRRPTSDQWAVAQVEWRELGWLDWNAARFDQIIYAGDAIGAAEFAHIVAAYPGIYLQLETIGRTFDTTAELPVPIQRDIVASAGIGGIIKAATTRYYAADLRAIVGTSVRQAARQTLEEGTAGLPWLPLAGDREAAARYREAVGVPRRVPLLVAIVARDESAGNCIAAFRAVVASEGDAHFVVHALDEASVENTKSSVLHMQGQIRRAEGDLSPYYRGIFSTVDLVLVGSDISPELARRIHADAESLKVKVLFSAELHHDLTGEMKNTLALLRQGGERAAALIAPPDPRPIEAWVRSIVSSMATVTRHKPAQLELVEKNLCGSVRDRRANSRDVALVSIALSNNLALEREPLFCIDISAYAAPGAIRRLDPSTRQKLLALIQRGNRHVRAVFFNEGKFVVANQFIANLVGLRNFYLPDEILVARPGDRIVGVDYLYSFAQASIPALLDLQTRGAAVLYVATGDAARAGGNEKALADIVYAWAEKVAFSIARRVNTSSATAGRTSSDQTLATIMRAASAAKMPLEILALDGPPDGLFDDTTSPSDFVQERVPSALEVAVARVANRTGEEAAQPVAALDYTVMGHLLGSYSLAIINRAVASALERALPGHVYYSAYETDPINHTEGVPADEQPLMIELCERPRPRQDREIVISQHWPIMPPKGQPRLALSLFPWEESHVPAGIVQTLTNGFDAVIAPAQCVTDALSVSGMRLPVATIGQAVDLAPFHDVARQRISRPIRRFLHISSCFPRKGVDVLLKAWAKAFVSEDDVVLVIKTFPNPHNDVEQQLDALRAQYPDMAPVEVVNRDAERKEMASFYADADVMVLPSRGEGYNLPALEAMAAGLPLIVTGHGGQRDFCGPDQARMIRFRFARSSSHVTGSHSMWVEPDVDDLVAALREHVDPAKAADVERRRQNALTAAAVEGDADAWVNRLNGTVSDLLKPQKLGSPKLGWVSTWEIQCGIAQYSGYLLNRMSADQRKSTMILCDYRTKVPAKLADGALPHTPVWQFIGDKAQEIVQAAREHEVEALVIQHQDGLISWEQLGRIGADPKLEAIVSIVVLHNARNLRRVGGEEAAMVIEGLSKMTRVLVHNIDDMNFLLGLGLRRNLGLFPHGAFTPRQTGWPRFIGPSDSPIIGCHGFFFRHKGIDKLIRAAAKLRREWPGLRLRLVNARFSGAEHDHTINECRAIAREVGMEDAIEWHLDFLPVEEIERLLSECDLIALPYSESDDSASGAVRTVMATMVPLVATRVQIFAELDEAAAWANDNDPDELVRTIAPLLKSPAKRREIQAGMNSWLTAHDWQRMATTLEDMVYGLVRQKRLGWGKPRNNVG
SIO_010081: PDMSB3_RS36975
subclass of: SO_0000673
so part of: PDMSB3_RS36975
location: complement(30604..35955)
location: region:30604-35955:-1
so has part: feature:30604-35955:-1:exon

WP_268738035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30604-35955:-1:exon

PDMSB3_RS36980
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36980
old locus tag: PDMSB3_0028
so part of: sequence
location: complement(35963..36943)
location: region:35963-36943:-1
so has part: feature:35963-36943:-1:exon
subclass of: SO_0000010

position:35963:-1
position: 35963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36943:-1
position: 36943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35963-36943:-1:exon

PDMSB3_RS36980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36980
old locus tag: PDMSB3_0028
inference: COORDINATES: protein motif:HMM:NF024824.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MFTDKILRNKARNAARSGNWDMAIRYYRQLCRTHFDNAKDAIQLGHALKESDDSEQALAVYLRAADVHREDVDAQRQAALFLMRLGRRNDAAVYFARTLILDSRLDDIRAQLQGLGFTDPLALDVIMLKAGLIGSDRLLKPISPIRRFLMGAALKQARASSKQNKWSNAESSYRAVLKHASGQPRVLIQLGHALREQGKLEEALIEYRRATLLFPRDPDPYVHIGHALKQLERRDSALEAYLVSWRLRPGQPEVLREIHAFRSDFSGDVLDSGNVSPPDQGNLEVRQLVIERVERIERSQLAEESWLDHRQKVIFKYLSGSLAYKE
SIO_010081: PDMSB3_RS36980
subclass of: SO_0000673
so part of: PDMSB3_RS36980
location: complement(35963..36943)
location: region:35963-36943:-1
so has part: feature:35963-36943:-1:exon

WP_165190203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35963-36943:-1:exon

PDMSB3_RS36985
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36985
old locus tag: PDMSB3_0029
so part of: sequence
location: complement(36999..38306)
location: region:36999-38306:-1
so has part: feature:36999-38306:-1:exon
subclass of: SO_0000010

position:36999:-1
position: 36999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38306:-1
position: 38306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36999-38306:-1:exon

PDMSB3_RS36985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36985
old locus tag: PDMSB3_0029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012327954.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 1 protein
translation: MNRIVAIDGHNLALQRGTGVATYAKSLADNIREMGGKGWTLYGAPISQKQKPMLREISFFDYLGGAGRPRRQWWSRTAKDVSRYLRSPLGYSAIEIPQNGVVESRCFDSRLPRGARLFNVDDLFLMARDHFKQHRKFLKIRFDEKPDVMHWTYPLPIVVEGVPNIYTLHDLVPLRLPYTTLDNKRYYQRLIGGCIEYGDRICTVSEKSKEDILRLFDVPEEKVKNTYQAVDTFAFKGEKSDRNAEQEVSGIYGLEPYDYFLFFGAIEPKKNVGRLVEAYLSSEAASKLVIVGSRAWKSEEETKLLDALEKHNSAMSKNVRLFDYAPRAFLISLIRCAKAVVFPSLYEGFGLPVLEAMQLGVPTLCSTEGSLPEIAGNASLIVNPYDVAEIARALERLDADAGLRADLAELGLAQAGRFSAENYRNRLTELYDSVL
SIO_010081: PDMSB3_RS36985
subclass of: SO_0000673
so part of: PDMSB3_RS36985
location: complement(36999..38306)
location: region:36999-38306:-1
so has part: feature:36999-38306:-1:exon

WP_165190205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36999-38306:-1:exon

PDMSB3_RS36990
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36990
old locus tag: PDMSB3_0030
so part of: sequence
location: complement(38356..39534)
location: region:38356-39534:-1
so has part: feature:38356-39534:-1:exon
subclass of: SO_0000010

position:38356:-1
position: 38356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39534:-1
position: 39534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38356-39534:-1:exon

PDMSB3_RS36990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36990
old locus tag: PDMSB3_0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012435383.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide biosynthesis/export family protein
translation: MHSICRRTRFALIGAVIGVSACSSIPNSGPSRSQVNDAAAQNRVAGIQIVDVTDAIVKRLYSERSSADFSSVLGAGNDFRQQLGVGDEVQVSIWEAPPATLFGGGVSAAGGSDSTVMPSGTRATTLPSQIIDGDGTINVPFVGSVKAAGSTPTQLQAYIAGRLKNIAHDPQVLVQLARNETSYVTVVGDVSNSTRMQLSARGERVLDALASAGGVKDPVDKIMIQVTRADTVASAPMQKVIRDPHQNVRLKAGDVVTALFQPYSFTSLGATGKNQEVNFEAQGISLAQALARSGGLDDSRSDARGVFIFRLQDAHALDWPNQPIRTTADGKVPVIYRINLRDPDSFFMAQSFMMDNNDVLYVSNAPVTEMQKVLNLVFSVVYPVVNGVQTFK
SIO_010081: PDMSB3_RS36990
subclass of: SO_0000673
so part of: PDMSB3_RS36990
location: complement(38356..39534)
location: region:38356-39534:-1
so has part: feature:38356-39534:-1:exon

WP_232064483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38356-39534:-1:exon

PDMSB3_RS36995
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS36995
old locus tag: PDMSB3_0031
so part of: sequence
location: 39671..40822
location: region:39671-40822:1
so has part: feature:39671-40822:1:exon
subclass of: SO_0000010

position:39671:1
position: 39671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40822:1
position: 40822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39671-40822:1:exon

PDMSB3_RS36995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS36995
old locus tag: PDMSB3_0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006484962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 1 protein
translation: MSNIFLDISRLLARVSNALHPTGVDRVGLAYMEHYRPRARAVLSEFGFSTILSEKASRQAFDLVLGSQPSRHAIRARVVRGIVGLRRDVPKRGVLLHTSHTGMQYPRYFRAMRRRGIRSVFMIHDLIPITHAEYCRPGIKEVHRERIHTALSHADGLVLNSQDTLDELQAEADRANLPMPPNVIARLAPGISSRIDAPSPLEHPYFVMLGTIEPRKNHWFMLHVWRKLVEQLGALAPKLVIIGRRGWECENVIDMLERCESVRCAVIELPDCTDEQMLTWLQHACALVFPSFVEGYGMPLVEALVLGVPVLASDLDVFHEIAGEIPDYLDPLDGPAWVAKIRAYAQPFSAERAAQLARIEHFNIPTWREHFEHIDRFVEMLVQ
SIO_010081: PDMSB3_RS36995
subclass of: SO_0000673
so part of: PDMSB3_RS36995
location: 39671..40822
location: region:39671-40822:1
so has part: feature:39671-40822:1:exon

WP_165190303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39671-40822:1:exon

PDMSB3_RS37000
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37000
old locus tag: PDMSB3_0032
so part of: sequence
location: 40831..42681
location: region:40831-42681:1
so has part: feature:40831-42681:1:exon
subclass of: SO_0000010

position:40831:1
position: 40831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42681:1
position: 42681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40831-42681:1:exon

PDMSB3_RS37000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37000
old locus tag: PDMSB3_0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011351041.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: capsular biosynthesis protein
translation: MSRRQAAKTGAWANGIMPRASGPVLSWFVAPSHEITTSGWLDCIDAELAKHPSAGPGTASLMERFRAACAFDPANCVPRAHTGLQVPAKSERVLLIDEPTATDFDNDEKTRARQFVRMATAAHAAHHGAEFWLARSGAQHVDKWLATLCPLREISPRLIGQPDSLCASIPHFDHVYTVSAPEGMQALLCNVPLHVFGTPWYAGRGLTYDHARQPEHRTTSSLDALFEAAFVRLARHLDPVTRESGSLDALLTGIEVHRATVLRFADMPRVAGVRFQWWKRPLATPYLTAGGSTLRWVSEAKHVQPGEHAAFWGARSPEGLPAHIPAIRIEDGFLHSTGLGSDHVAPLSQVIDRRGLYFDASCPNDLTHILNDTEFGEAELARARALRSDITRLGLTKYNLGRRKPGWLCPSGKRMLLVPGQVADDASIRLGTSGISTAEELLREVRASNPGAFIVYKPHPDVLSGNRPGLIEAEKLADIVETNADLISLLEVANEVHTLSSLAGFEALIRGKPVSTYGLPFYAGWGLTQDALEQRWRRRKLSLDMLTAGVLLRYPLYWDWSLRLFTTPEAIVRQLAVPSTRPLDKIYRNNLRPLIKATRWSRNVLLHARWRYGKRN
SIO_010081: PDMSB3_RS37000
subclass of: SO_0000673
so part of: PDMSB3_RS37000
location: 40831..42681
location: region:40831-42681:1
so has part: feature:40831-42681:1:exon

WP_232064471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40831-42681:1:exon

PDMSB3_RS37005
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37005
old locus tag: PDMSB3_0033
pseudo: true
so part of: sequence
location: 42845..>43418
location: region:42845-43418:1
so has part: feature:42845-43418:1:exon
subclass of: SO_0000010

position:42845:1
position: 42845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43418:1
position: 43418
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42845-43418:1:exon

PDMSB3_RS37005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37005
old locus tag: PDMSB3_0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004194323.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sugar phosphate nucleotidyltransferase
SIO_010081: PDMSB3_RS37005
subclass of: SO_0000673
so part of: PDMSB3_RS37005
location: 42845..>43418
location: region:42845-43418:1
so has part: feature:42845-43418:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42845-43418:1:exon

PDMSB3_RS37010
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37010
old locus tag: PDMSB3_0036
so part of: sequence
location: 43431..45098
location: region:43431-45098:1
so has part: feature:43431-45098:1:exon
subclass of: SO_0000010

position:43431:1
position: 43431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45098:1
position: 45098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43431-45098:1:exon

PDMSB3_RS37010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37010
old locus tag: PDMSB3_0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012432223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTKFSVLLALALFTCVSAFAQNRTLPALTSSTATTDGKTQPIAGITTTALANQLKGAVTPIEFGAKGNGSSDDTAAVQAAIDSAAARHVTLDLGGHVYGIASALTASQLVIITGSGGGSGLYGHTCTEGFRALRANLSLLTLQAPQSEVSHVCFESGPGVSNTGGYYIKSVAGANSSKIADSSFYGGCLSVIVTGSSSMQNVNSVIDRNIFVPAQSALCTAVELGSDSKHGLTVDTVVSNNEIYCHGGTSGAVGMLFSDASGYYVTNNDIYACSYGTKLYPGASQIVGPGFFTNTVLGDTPGYVGMLVKTSDSTAQILSNKFVNTWATSSANRGPAILVNQVNGRIRGTSFTSLRAYNATGATNQDIVDIQGGWGTRILNSAVCLQGNADRAAGISITRGARYTAIQNNEINGACDLAGGVLGTAIKVDSTIDEVQIDGNDIGEGVTTPIDWNKTSNNINAVVGNNIGVDTTVGSVASAATLSLPANPIVKITGTTPVKALNGAWNGRVVQIITSNGLTFTKGGNICNASDLTTAANGSVTASWGGGLGCWMIH
SIO_010081: PDMSB3_RS37010
subclass of: SO_0000673
so part of: PDMSB3_RS37010
location: 43431..45098
location: region:43431-45098:1
so has part: feature:43431-45098:1:exon

WP_165190165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43431-45098:1:exon

PDMSB3_RS37015
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37015
old locus tag: PDMSB3_0037
so part of: sequence
location: complement(45616..46476)
location: region:45616-46476:-1
so has part: feature:45616-46476:-1:exon
subclass of: SO_0000010

position:45616:-1
position: 45616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46476:-1
position: 46476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45616-46476:-1:exon

PDMSB3_RS37015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37015
old locus tag: PDMSB3_0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013691736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MNDLLRAVRPLDQEIPLEAAELVASMAIELGASPDEILEVDGRIKGTVAMSRALVNAQHGLSLNEKRLMMTALRSIDSRKSPYQHGKADGYVSVRIRAEEFAAVAALAPRSGEKQAAAAYQGMKEACASLLERKLSYMDGKKRVQLRWVWKATYHDGEAWAEICFSPDLTPHIFLLQRKFVSYQLDFARGLQSIYSWRLLELLMREKDRGVLLITVEDLRTALEVPPTYRFADIKRRVIDMAVSELNEKADLVIDWKGIKRGRAVHSLEFRFIENPQRRLPIDMAD
SIO_010081: PDMSB3_RS37015
subclass of: SO_0000673
so part of: PDMSB3_RS37015
location: complement(45616..46476)
location: region:45616-46476:-1
so has part: feature:45616-46476:-1:exon

WP_232064473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45616-46476:-1:exon

PDMSB3_RS38145
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS38145
pseudo: true
so part of: sequence
location: complement(<47134..>47274)
location: region:47134-47274:-1
so has part: feature:47134-47274:-1:exon
subclass of: SO_0000010

position:47134:-1
position: 47134
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:47274:-1
position: 47274
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47134-47274:-1:exon

PDMSB3_RS38145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS38145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011235908.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: PDMSB3_RS38145
subclass of: SO_0000673
so part of: PDMSB3_RS38145
location: complement(<47134..>47274)
location: region:47134-47274:-1
so has part: feature:47134-47274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47134-47274:-1:exon

PDMSB3_RS37025
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37025
old locus tag: PDMSB3_0040
so part of: sequence
location: 48783..49118
location: region:48783-49118:1
so has part: feature:48783-49118:1:exon
subclass of: SO_0000010

position:48783:1
position: 48783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49118:1
position: 49118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48783-49118:1:exon

PDMSB3_RS37025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37025
old locus tag: PDMSB3_0040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPADGINAYAAGRKTVTSPAMGKVHVPATMTAFIAKDNGGEISKKDKYLPRSRGSPSLRDFCGVPNPADYRVSVILTTTATFASITTAAFTVKRTTRIVHEKWIYRTHEQL
SIO_010081: PDMSB3_RS37025
subclass of: SO_0000673
so part of: PDMSB3_RS37025
location: 48783..49118
location: region:48783-49118:1
so has part: feature:48783-49118:1:exon

WP_165190213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48783-49118:1:exon

PDMSB3_RS37030
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37030
old locus tag: PDMSB3_0041
so part of: sequence
location: 49105..49926
location: region:49105-49926:1
so has part: feature:49105-49926:1:exon
subclass of: SO_0000010

position:49105:1
position: 49105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49926:1
position: 49926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49105-49926:1:exon

PDMSB3_RS37030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37030
old locus tag: PDMSB3_0041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017842830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MNSFDQTKVIAIANHKGGCGKTTTVINLAAEFGRLGLKVLVVDMDPQANASLHIGKTHPSRVDFTSAELLLSNVASLPAAIHEETNVEGVSLIYGSLALGKTEDELKDVTPRPSEELRSKLEPADGIYDVILIDCPPSLKLLTSNAMASATHIIVPVESGSQYGLYGADDLLKHIDKIKRINPSVRLLGALLIKHDERQTVCKLLESTALKTFGHILPVKISTSTKVNQAAVMQQSLHALDRSSKVAREFRQLAASLAQTLELNAAEEGGKNE
SIO_010081: PDMSB3_RS37030
subclass of: SO_0000673
so part of: PDMSB3_RS37030
location: 49105..49926
location: region:49105-49926:1
so has part: feature:49105-49926:1:exon

WP_165190215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49105-49926:1:exon

PDMSB3_RS37035
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37035
old locus tag: PDMSB3_0042
so part of: sequence
location: 49919..50800
location: region:49919-50800:1
so has part: feature:49919-50800:1:exon
subclass of: SO_0000010

position:49919:1
position: 49919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50800:1
position: 50800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49919-50800:1:exon

PDMSB3_RS37035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37035
old locus tag: PDMSB3_0042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006999614.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSKSLKALLAQKAEENTQRHREANYRDDFDVGRQHTKLPLDRIDPNPYQPRTSFPEEEIRELAVSISAVGLLQPISVRAVGERYELIAGERRLRAHKLLTRPTIEALVISADEATSATLALAENIEREDLSDFEIGESIKRLEEHFPRRTKLAESLGIQRSDLYRYLSFASLPDSIRKRLAARPKLLSRSAAADIVRVLKEAGNDESISRKLEEAWALLESGKLDQTKLASFLCNSATTTAGTRQRPTHIMKQGAKVGTFSQTPHEFVMKVANNVLTDEQKLKIQQFVLELLA
SIO_010081: PDMSB3_RS37035
subclass of: SO_0000673
so part of: PDMSB3_RS37035
location: 49919..50800
location: region:49919-50800:1
so has part: feature:49919-50800:1:exon

WP_165190217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49919-50800:1:exon

PDMSB3_RS37040
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37040
old locus tag: PDMSB3_0044
so part of: sequence
location: 51229..51384
location: region:51229-51384:1
so has part: feature:51229-51384:1:exon
subclass of: SO_0000010

position:51229:1
position: 51229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51384:1
position: 51384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51229-51384:1:exon

PDMSB3_RS37040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37040
old locus tag: PDMSB3_0044
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLIESVEYKTGVPHEYQFEITTGELIALIGTHSVLLSKEKRGNPVPAKAA
SIO_010081: PDMSB3_RS37040
subclass of: SO_0000673
so part of: PDMSB3_RS37040
location: 51229..51384
location: region:51229-51384:1
so has part: feature:51229-51384:1:exon

WP_165190219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51229-51384:1:exon

PDMSB3_RS37045
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37045
old locus tag: PDMSB3_0045
so part of: sequence
location: 51902..52174
location: region:51902-52174:1
so has part: feature:51902-52174:1:exon
subclass of: SO_0000010

position:51902:1
position: 51902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52174:1
position: 52174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51902-52174:1:exon

PDMSB3_RS37045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37045
old locus tag: PDMSB3_0045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018245369.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MISADLGPQLEGYIARLVETGRYRSKSEVLREGVRLIQDRETQLAALDTVIERGLADSDAGRGTPADEVFDRLEAKYQAMARQATDQRDS
SIO_010081: PDMSB3_RS37045
subclass of: SO_0000673
so part of: PDMSB3_RS37045
location: 51902..52174
location: region:51902-52174:1
so has part: feature:51902-52174:1:exon

WP_165190221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51902-52174:1:exon

PDMSB3_RS37050
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37050
old locus tag: PDMSB3_0046
so part of: sequence
location: 52171..52470
location: region:52171-52470:1
so has part: feature:52171-52470:1:exon
subclass of: SO_0000010

position:52171:1
position: 52171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52470:1
position: 52470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52171-52470:1:exon

PDMSB3_RS37050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37050
old locus tag: PDMSB3_0046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006397720.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MIVRILPAAEAELEAIGDYIARDNLSRAVSFVRELRERCLDLADMPLAFPLVPRYEGRGIRHRVHGHYQIFYRGVGQPAERVDVIHVLHSARNTAAILF
SIO_010081: PDMSB3_RS37050
subclass of: SO_0000673
so part of: PDMSB3_RS37050
location: 52171..52470
location: region:52171-52470:1
so has part: feature:52171-52470:1:exon

WP_165190223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52171-52470:1:exon

PDMSB3_RS37055
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37055
old locus tag: PDMSB3_0047
so part of: sequence
location: 52596..54491
location: region:52596-54491:1
so has part: feature:52596-54491:1:exon
subclass of: SO_0000010

position:52596:1
position: 52596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54491:1
position: 54491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52596-54491:1:exon

PDMSB3_RS37055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37055
old locus tag: PDMSB3_0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007731387.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MANRPQQLTLPLPRSYTRTDFAALRAFVQRVPLPAIARLYFDPDTAPHAASADALERYLRTMRDDLVHLATLHGSSVLADHLKASTRHHGSAKLTAVTLRMVEQASRLAAAAPAATHPVGLWFRPLVARRLVGEGIPTLGALVDFCNRRGGSWWRAVPRIGLLRARVLVAWLRQHAGTLGAVVTDDVELADPLEAPSSAARVALVPAGTGRASELAPLERVTLPHALSGGEGPHGNGTRGLNRAPGLCYLQAQHDLDAVRAWLHRYRDRPQALRAYTRELERLLLWAVTVRGTALSSLTVDDCEAYKDFLAVPSAAFVGLRTRRDSPRWRPFAPDGLSPDSQRYAVRALRAAFDWFVNVHYLAGNPWQAVSDPVTVTREHAMRIERALPLDLWSRVRRFAEDRGASLGPAAPRWRAARAALLLMGDSGLRNAEAALARREQLRYVPPDGEVPATWELEVTGKGRKQRIVPVSGACVEALAAHWRDRELDLKAPPPSAPLVAPLVIPATPAAQRRHAGAPDGHGRQGQQGGAGYSGNGLRELVNWAVRQIRAQLDLTEDERRQLAGTTPHAFRHTFGTQAAVDVPLDVVQQVLGHASLQTTTIYVQAERKRVRRELAGYYQRMTGADASQSG
SIO_010081: PDMSB3_RS37055
subclass of: SO_0000673
so part of: PDMSB3_RS37055
location: 52596..54491
location: region:52596-54491:1
so has part: feature:52596-54491:1:exon

WP_165190243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52596-54491:1:exon

PDMSB3_RS37060
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37060
old locus tag: PDMSB3_0048
so part of: sequence
location: complement(54723..54920)
location: region:54723-54920:-1
so has part: feature:54723-54920:-1:exon
subclass of: SO_0000010

position:54723:-1
position: 54723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54920:-1
position: 54920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54723-54920:-1:exon

PDMSB3_RS37060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37060
old locus tag: PDMSB3_0048
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIALIGIDHLRDVLEHFPELAGVSHFRVTMADQTVVHQMTRAGLFELAQTCEAPRITFSPLKPV
SIO_010081: PDMSB3_RS37060
subclass of: SO_0000673
so part of: PDMSB3_RS37060
location: complement(54723..54920)
location: region:54723-54920:-1
so has part: feature:54723-54920:-1:exon

WP_165190245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54723-54920:-1:exon

PDMSB3_RS37065
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37065
old locus tag: PDMSB3_0049
pseudo: true
so part of: sequence
location: <55374..55538
location: region:55374-55538:1
so has part: feature:55374-55538:1:exon
subclass of: SO_0000010

position:55374:1
position: 55374
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:55538:1
position: 55538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55374-55538:1:exon

PDMSB3_RS37065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37065
old locus tag: PDMSB3_0049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017279408.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: PDMSB3_RS37065
subclass of: SO_0000673
so part of: PDMSB3_RS37065
location: <55374..55538
location: region:55374-55538:1
so has part: feature:55374-55538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55374-55538:1:exon

PDMSB3_RS37070
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37070
old locus tag: PDMSB3_0050
so part of: sequence
location: complement(56417..57367)
location: region:56417-57367:-1
so has part: feature:56417-57367:-1:exon
subclass of: SO_0000010

position:56417:-1
position: 56417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57367:-1
position: 57367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56417-57367:-1:exon

PDMSB3_RS37070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37070
old locus tag: PDMSB3_0050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017279408.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSVLSRPVEPGKRLTAAQFHQLAAVPAEVEWFANLDNPRTRRAYRIDLQDFMGFAGITRPDEFRIVTRAHVLAWRKVLEERALSGATIRRKLAALSSLFEYLCEKNAVETNPVKGAKRPKVESGEGKTSALGDHQARALLDAPDPETLKGKRDRALLSVLLYHGLRREELCLLKVRDIQARRGVLHLRIHGKGNKLRYLPLHPGSAERIHTYLEVAGHGDTPAAPLFQPVRRKTGAGLTADGVYKVVLNYAAKARIQLQGFGVHSLRATAATNALEHEADIAKVQEWLGHANIATTRIYDRRKGRPEDSPTFKVAY
SIO_010081: PDMSB3_RS37070
subclass of: SO_0000673
so part of: PDMSB3_RS37070
location: complement(56417..57367)
location: region:56417-57367:-1
so has part: feature:56417-57367:-1:exon

WP_165190247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56417-57367:-1:exon

PDMSB3_RS37075
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37075
old locus tag: PDMSB3_0051
so part of: sequence
location: complement(57342..57575)
location: region:57342-57575:-1
so has part: feature:57342-57575:-1:exon
subclass of: SO_0000010

position:57342:-1
position: 57342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57575:-1
position: 57575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57342-57575:-1:exon

PDMSB3_RS37075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37075
old locus tag: PDMSB3_0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017331031.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLLTQCDTETGRLCRSVHLQASGDGKSVLLVEIDERKVGLRREYRFEITTGELIALIRAQGAELPGENHVRTVEAS
SIO_010081: PDMSB3_RS37075
subclass of: SO_0000673
so part of: PDMSB3_RS37075
location: complement(57342..57575)
location: region:57342-57575:-1
so has part: feature:57342-57575:-1:exon

WP_232064475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57342-57575:-1:exon

PDMSB3_RS37080
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37080
old locus tag: PDMSB3_0052
so part of: sequence
location: complement(58202..58444)
location: region:58202-58444:-1
so has part: feature:58202-58444:-1:exon
subclass of: SO_0000010

position:58202:-1
position: 58202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58444:-1
position: 58444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58202-58444:-1:exon

PDMSB3_RS37080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37080
old locus tag: PDMSB3_0052
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKIDRILVGMVLNLFLNINRRLSATGELVFHPVLADRLFAVISGADKITEQTDRVLPLPAGFYAASICEGASRCQRCAF
SIO_010081: PDMSB3_RS37080
subclass of: SO_0000673
so part of: PDMSB3_RS37080
location: complement(58202..58444)
location: region:58202-58444:-1
so has part: feature:58202-58444:-1:exon

WP_165190167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58202-58444:-1:exon

PDMSB3_RS37085
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: wecB
locus tag: PDMSB3_RS37085
old locus tag: PDMSB3_0053
so part of: sequence
location: 58413..59627
location: region:58413-59627:1
so has part: feature:58413-59627:1:exon
subclass of: SO_0000010

position:58413:1
position: 58413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59627:1
position: 59627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58413-59627:1:exon

PDMSB3_RS37085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: wecB
locus tag: PDMSB3_RS37085
old locus tag: PDMSB3_0053
EC number: 5.1.3.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013339757.1
GO function: GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
translation: MPTRILSIFGTRPEAIKMAPLVKQLEESPEIESVVCVTGQHQKMLDQVLDLFEIRPHHNLALMTGNQTLNGLVSRLIGSVDEVLAAVAPDRVLVHGDTTTASAAALSAFHRRIPIGHVEAGLRTGNLLQPWPEEMNRRIVDVMSDLMFAPTAGSKANLVREALPGKIVVTGNTVIDALNLTTARIDSDAALRTELDARLPFLDGALPVLLVTGHRRESFGAGLANICAALADLAQTNAVQIVYPVHLNPNVRGPVQNSLGRARNVHLIEPLDYLGFVRLMQRASIILTDSGGVQEEAPALGKPVLVMREITERPEAVAAGTVRLVGTQREAIVRAVTGLLEDAHQRDGFAQRINPYGDGHASRRIVAALTGRPYVEFDAAASQASSPDRSGHALSQEAVDAALP
SIO_010081: PDMSB3_RS37085
subclass of: SO_0000673
so part of: PDMSB3_RS37085
location: 58413..59627
location: region:58413-59627:1
so has part: feature:58413-59627:1:exon

WP_165190249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58413-59627:1:exon

PDMSB3_RS37090
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37090
old locus tag: PDMSB3_0054
so part of: sequence
location: 59867..62038
location: region:59867-62038:1
so has part: feature:59867-62038:1:exon
subclass of: SO_0000010

position:59867:1
position: 59867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62038:1
position: 62038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59867-62038:1:exon

PDMSB3_RS37090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37090
old locus tag: PDMSB3_0054
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015002288.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose synthase
translation: MSVALCCALAGWAGAARAQGDSFAVALANAGDTVTSRSVALTRLGIRDVSTLDAPDSRREYYFPVPAGVPVSDAQLQLDANYLRGDGGRTTMLVTIDGAPAQARAFTQPQGDAAATLAVSGEPRPSGYVRIGLGWASVINDVVCADQTAIGNLLRVAPTTHLSYRYDTREVKDLRTAWTGLPPTPVIAIAGKHVGATSYDTAWRVAALMQRDGREPVVQGWAKVGDTVELGALDVPAPLRALPAFAALAAGGSHRLADPAELGALLVAAPGRVMPADVIVADDALRAAVNASLDALQAQAAGVSASAADAFAMWRKTTMTPLVAPLSAGEARLVHLAGQASIVVGDSKAVSLLAQVWRPINVSNQLVVHEIDSAANGKSDVVALAALGGEPRTVEVLREASWTAAFDLGAVASGGRLPADVVLDLAGTPNTHGSAVVASVYFNDVLIGAKLLGTEGRAQQVVAHIPRFALAARNQLRVTFQRQSDAGCATNQGYPVEVLPSSHLTLVKAEGDANFAGMVARFASSARVIVPASYLADAFETLPRVARLADATGVAPQRAVLTVAPDGQNVAPTGPFLALDVPLAEPKSHVRVTDNGLTILGPDERTLYDVSGIANLTGVGVIDVEHSGSTAGVVYRSIGARAPVLPVALQLARGDVAVVDGSGVLRQLDTVHAGGVELGDSGAPWTRDWLTWVIPAALVSVFVVVLLFAGYTRRRKQRKQGGE
SIO_010081: PDMSB3_RS37090
subclass of: SO_0000673
so part of: PDMSB3_RS37090
location: 59867..62038
location: region:59867-62038:1
so has part: feature:59867-62038:1:exon

WP_165190251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59867-62038:1:exon

PDMSB3_RS37095
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37095
old locus tag: PDMSB3_0055
so part of: sequence
location: 62050..64176
location: region:62050-64176:1
so has part: feature:62050-64176:1:exon
subclass of: SO_0000010

position:62050:1
position: 62050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64176:1
position: 64176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62050-64176:1:exon

PDMSB3_RS37095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37095
old locus tag: PDMSB3_0055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013587925.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyl transferase family protein
translation: MDLHLGYYAAQYYELLQYCAGVIAVLILLSSVDDLVIDAWYWVREAYRAYTIKRVHRPLTTEQLRAREEQPIAIMVPAWLEYDVIAAMVEDMVRVLDYRNYVVFVGTYQNDVRTIAEVERMRRRYKQLRRVEVPHDGPTCKADCLNWVIQAIFKYEQEARIEFAGVVLHDSEDMLHPIELKFFNYLLPRKDMIQLPVASLERHWYELVAGTYMDEFAEWHAKDLVVRESMVGSVPSAGVGTCFSRRALLALIETTGNQPFNTDSLTEDYDVGARLGKLGMQSIFARFPVQFRSRRASWFGLGKDREVTVTMPLCVREFFPDTLRTAYRQRARWALGIGLQGWQQTGWSGSFANRYLLFRDRKGIVTAFVGMMAYALVLQFLAFMVADALGLSGEIPPSPFIDTRWLHVVLLLNAIAVVLRVVQRCYFVTRLYGWEHGLMAIPRMVVGNFINFLAVSRAWRMFLGHLVTGKRLAWDKTMHDFPSVDGLMGGRRQRLGELLLSWQAIDENQLAAALGDEHAREAPLGRVLMAKGWLDEETLAEAIAFQSDLPRAALDPVQLRTDRARLPFEVAIRHRVLAQGKDGDGRAILLAASPLGDEVLAELAQALGQPVTQQIVRESEIATGLRVLRGEQEALAVGAARVPLIGDLLIELGHVTRERFNEALQLYRPDLDGRIGDFMMTRGVITAVALNAAIQAQARARQSGALVT
SIO_010081: PDMSB3_RS37095
subclass of: SO_0000673
so part of: PDMSB3_RS37095
location: 62050..64176
location: region:62050-64176:1
so has part: feature:62050-64176:1:exon

WP_165190253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62050-64176:1:exon

PDMSB3_RS37100
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37100
old locus tag: PDMSB3_0056
so part of: sequence
location: 64173..64997
location: region:64173-64997:1
so has part: feature:64173-64997:1:exon
subclass of: SO_0000010

position:64173:1
position: 64173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64997:1
position: 64997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64173-64997:1:exon

PDMSB3_RS37100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37100
old locus tag: PDMSB3_0056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014900174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQAGVLARGFAALCLAALAGCQSQPASEGIVWQIDNQHNEPHGDWNRLGVTDLLIQWTAVDDTAFVSGTTLREAQRLPDWRRIAAEPWANSVLVGLAGRFDERAARANATQLVEQSLQLVAAAPPLHIEGWYFPVEVDPSWQDARSLAPLLERLPRPLWISVYDRSNIGGKALADWLDSWLPHDVGVLFQDGVGVYAREPRVARDYADALAVTLGKARVRVIAEVFRPGPNQTFRSATAAELMPQLKAYHGYRTYLFDGPHYVSPELVEELLK
SIO_010081: PDMSB3_RS37100
subclass of: SO_0000673
so part of: PDMSB3_RS37100
location: 64173..64997
location: region:64173-64997:1
so has part: feature:64173-64997:1:exon

WP_232064476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64173-64997:1:exon

PDMSB3_RS37105
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37105
old locus tag: PDMSB3_0057
so part of: sequence
location: 64994..67846
location: region:64994-67846:1
so has part: feature:64994-67846:1:exon
subclass of: SO_0000010

position:64994:1
position: 64994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67846:1
position: 67846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64994-67846:1:exon

PDMSB3_RS37105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37105
old locus tag: PDMSB3_0057
inference: COORDINATES: protein motif:HMM:NF024679.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacteriophage N4 adsorption protein A
translation: MTDRLPLSAKRRVRPMLAVAFALASLSAGADEILPLPLSGAAYRIADQAYREYASGDYEAAARDAREAVRLRPDVARLRSLLQQAESAVRNRGKPAPAARVAPAGAKVPAPALVAPATQPSSAAAQRASDLASQALDLLAHNEVENASSDIDQAVTLAPEISQYRLLQVSLLIRLQHYAAAETASRAALVAASDDSMVYVLHGYLLQRADHYDAARQYYAQALTGDSLGDGDLRAVRLLIADLMLGAGDTQSALDALQSLPDSDTDVGERRVYAHTIAADGKTLRPALKPPVLQCVVNRFGPVCSLFPSGRPSQALANEAFHAAAENRQQDALDLFQLALKIGGANRELEGRRDSVRRQLAQQPAAAAYRAMADNDPDLAQKEIARAIVYAPDVMPYRLLQIEALDRKQQYAVAEAAASEAMHVDDEDAVPVLLRGYLRQMQGKYAAARVDYGNALKNDTLSDDDLHNLRLYVVDAAMAAGDTKFAGDTLHTLPASDEEAAWRRSLMTFYARHSGHPRLQAPFLDCRETPYGTACTARAADNASNAMIEAIYKALGRKENATALSLARDLSAASPKNEQYRRVLVQALQANGRNDEAQRVTASLKDPVPDLSFAYLASMSDASALALQTFQQMDAAGKLPPRALQDAGFAAINADQRLVAVNYFKRSIDAAADGSLDLPPQSLYETRRAVSELERQWGAYVSLSYRGSNNMQAGQNQSALVGDNLQIGTEAYWRPPALDHDGSYVDLYARLIDNVYSAPTTSTNTVTGDTFSGKSPTGLPSLLSAFGVRWKPLASQNVIIAFERQQAIGSAAQSDWLPRLGYSYGTGTDLRVDLPSWNTLQIYAETGYYLRAQTYYFTSEWQSGRSFRLPEAWLGHTVLFPHAVFGADYNNAYSRPWAVGAGVGVNLRHWFREDRYHAPQSSFDLSLQYRLKVAGDERAKGWFIRSVFNY
SIO_010081: PDMSB3_RS37105
subclass of: SO_0000673
so part of: PDMSB3_RS37105
location: 64994..67846
location: region:64994-67846:1
so has part: feature:64994-67846:1:exon

WP_165190255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64994-67846:1:exon

PDMSB3_RS37110
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37110
old locus tag: PDMSB3_0058
so part of: sequence
location: 67859..68542
location: region:67859-68542:1
so has part: feature:67859-68542:1:exon
subclass of: SO_0000010

position:67859:1
position: 67859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68542:1
position: 68542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67859-68542:1:exon

PDMSB3_RS37110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37110
old locus tag: PDMSB3_0058
inference: COORDINATES: protein motif:HMM:NF022630.2
GO process: GO:0042121 - alginic acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alginate O-acetyltransferase AlgF
translation: MMKIQTLYIRAACTVGAAVSFSLSPPVAAQEIARLYAPQAPAGSSYLRVVNPSAKAVNVEFAGKRDALDPKRRVVTDYRVVDASLEVAINVDGHPLKHFKVKPGTFNTMVLTGADQPQVIADATNDRDDLKAELRFYNVARECNGALAIQDGATVFDHVNTGDSRKRAINPVQAHLVGRCDGAAVSEPAALPLLKSGDHASVFLLGDKASPRLVTQVDATEAYSGAH
SIO_010081: PDMSB3_RS37110
subclass of: SO_0000673
so part of: PDMSB3_RS37110
location: 67859..68542
location: region:67859-68542:1
so has part: feature:67859-68542:1:exon

WP_165190257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67859-68542:1:exon

PDMSB3_RS37115
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37115
old locus tag: PDMSB3_0059
so part of: sequence
location: 68554..69939
location: region:68554-69939:1
so has part: feature:68554-69939:1:exon
subclass of: SO_0000010

position:68554:1
position: 68554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69939:1
position: 69939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68554-69939:1:exon

PDMSB3_RS37115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37115
old locus tag: PDMSB3_0059
EC number: 2.3.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008326667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBOAT family O-acyltransferase
translation: MVFASISFVFLFLPLFLLAYAAVGMRWRNLAILAFSWIFYAWWRLDFLPLIVSIAVWSWCTGRWIERAQGRQRRYALLVAIGWPLLALIWFKYANMLAGTLQWMGASPSGWQAVLLPIGLSFFVFGAISYSVDVYRGTVPAEPSFVNYATYQSMFGHLVAGPVVRYKWVAERLQMRSFHRTEFAIGVERFMHGFAQKILLADTLAPLVGSGYQLASPSAADAALTVLAYTLQLYFDFSAYSSMAIGLGLIVGLKFPENFDTPYLSGALSEFWRRWHISLSSWLRDYLYIPLGGNRQSLSRGCINLMITMALGGLWHGASWTFMVWGLWHGLGLVTERLWRTRGGPRLPFWFGHALTLLFVMLGWLLFRAQTWTEVSTMLLALSGQNGWQLSSAFAAALRPNQLACLLIGVLLVYLPLLWARSQKCTACSRALLRYLTVPLWLVALWVLQGRTVVPFLYFQF
SIO_010081: PDMSB3_RS37115
subclass of: SO_0000673
so part of: PDMSB3_RS37115
location: 68554..69939
location: region:68554-69939:1
so has part: feature:68554-69939:1:exon

WP_165190259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68554-69939:1:exon

PDMSB3_RS37120
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37120
old locus tag: PDMSB3_0060
so part of: sequence
location: 69834..71006
location: region:69834-71006:1
so has part: feature:69834-71006:1:exon
subclass of: SO_0000010

position:69834:1
position: 69834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71006:1
position: 71006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69834-71006:1:exon

PDMSB3_RS37120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37120
old locus tag: PDMSB3_0060
inference: COORDINATES: protein motif:HMM:NF028132.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQSRTAALSDGAAMAGGVVGVARAHRGSISLFPVLIMIRKINTIAFVIIILCGGAALLWRLSKAGQLFTHTVTSSSWLDGGVTQALDERVAQAAPPDAHINRVLNGLLFAVTGDPDPQVRSGCPGWLFLTEEVVETPGGERNLLRRVELTRKLQADFEHRGIELVTVAVPDKVEQAAGELCGLTVSRQARGRRAAWQQASEGLALHQVDLHSGWIAPGYWRTDSHWNRAGASFAAQRVAVIARAFAPPGDSSMELQSAVATHARSGDLMRLAGIDRNTPPFAPPVDTDHEVQLVIHRSGSLLDNVAAPVVMLAGSSYSLNSGFIDYLQLGMKQEIAQQSRLGSGFAGSVLELLKHHPERLDGIKLMIWEWPLRSLYQPLTDEENNYLAQP
SIO_010081: PDMSB3_RS37120
subclass of: SO_0000673
so part of: PDMSB3_RS37120
location: 69834..71006
location: region:69834-71006:1
so has part: feature:69834-71006:1:exon

WP_165190261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69834-71006:1:exon

PDMSB3_RS37125
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37125
old locus tag: PDMSB3_0061
so part of: sequence
location: 71003..72016
location: region:71003-72016:1
so has part: feature:71003-72016:1:exon
subclass of: SO_0000010

position:71003:1
position: 71003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72016:1
position: 72016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71003-72016:1:exon

PDMSB3_RS37125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37125
old locus tag: PDMSB3_0061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020294305.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocation pathway signal
translation: MIFTLTTFNLLNKRTSRLLKYAVGLGALGVALQATPGNAASSVIEGQDGWLFPGWEHTDKVDRAQLVSNIKVIEETRDALAAKHIGLVVMVVPAKAPFYPQRLPAGLSLSPEIKSRYVDVLGMLSAADIATFDDKEVLRAVEHDRQTAFYRADYHWTAWAAEASADETAKVIRSKFELPPFGTGTELGEWTNDRRYGDLATNFMSPEDRKRIGRDTYTVRKQPDASAGLLDSAPSQVQVVGNSFVQPYLGYPQKLSNAIGQPVGLTWNPGNIGPWKTFLDAVESPDFSRNKPKVIVWQFNEAQLENNSNSSDNWDAKGVMPVNTWRSRVAAALSNKP
SIO_010081: PDMSB3_RS37125
subclass of: SO_0000673
so part of: PDMSB3_RS37125
location: 71003..72016
location: region:71003-72016:1
so has part: feature:71003-72016:1:exon

WP_165190263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71003-72016:1:exon

PDMSB3_RS37130
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: iscB
locus tag: PDMSB3_RS37130
so part of: sequence
location: 73293..74579
location: region:73293-74579:1
so has part: feature:73293-74579:1:exon
subclass of: SO_0000010

position:73293:1
position: 73293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74579:1
position: 74579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73293-74579:1:exon

PDMSB3_RS37130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: iscB
locus tag: PDMSB3_RS37130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020308273.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease IscB
translation: MAVFVLDRRGRPLMPCSEKRARLMLERQRARVHRLMPFVIRLTDRLIEESTLQPVRIKIESGSKITGLALVREDGESTAVLNLFELIHRGRQISEGLSSRSNFRRRRRSANLRYRAPHYANPARTNGWLPPSLRHRIDTTKSWVRRFIRWAPVSGLASELVRYDLAAVEGDERVSDNQEHAEIAAQEIRAYLLDKWGHQCVYCDSDRQHVQIDPIDLRTAGEPARDISGLILACTSCIARRAGRDISEFVTDRARLERLRNWTKAPQRDRAAVDGARSAIAQFLATTGLPVELASGGRTKWNRTRFALPKSQALDAVCVGAVTAVVCWRIPVIKIKCTGRGRYQRTLVNAHGFPRAHLMRNKRIHNVQTGDRVRATVPTGKKAGIHTGRVAVRSRGYFDVHKPDGPVTGIHHRYCVVLQRADGYSYSM
SIO_010081: PDMSB3_RS37130
subclass of: SO_0000673
so part of: PDMSB3_RS37130
location: 73293..74579
location: region:73293-74579:1
so has part: feature:73293-74579:1:exon

WP_165190265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73293-74579:1:exon

PDMSB3_RS37135
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37135
old locus tag: PDMSB3_0069
so part of: sequence
location: 74814..76595
location: region:74814-76595:1
so has part: feature:74814-76595:1:exon
subclass of: SO_0000010

position:74814:1
position: 74814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76595:1
position: 76595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74814-76595:1:exon

PDMSB3_RS37135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37135
old locus tag: PDMSB3_0069
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006401411.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin
translation: MLGINSNINSLVAQQNLAGSQSALSQAITRLSSGKRINSAADDAAGLAISTGMQSQINGLNQGVSNANDGVSMIQTASSGLAQITSSLQRIRQLAVQASNGGLTADNQAALQQEVSQQIAEVNRIASQTTYNGKNVLDGSAGNVSFQVGANVGQTINLNLTQNVSSTALGKGLVGAGTSLGTIANVNVDSATGGTYNAQTSTGYQVTSINVLSDGKGGFTYTDQNNQALTSTATKALFGNSTGVGGSLNITTNASGTSALDVTNQVSAISSANNVTNYPVGTGTTIGTITGISIDAKTGADVAAGTAGAITSITVKTDGSGGFTFADQSGNALASGLVGNTTTAGSLFTITAGTGGAGNKLALTSSTAQATAISLASSGATFGSISAGSTIGTLTGLSLDPNSGAAVAAGSAGAITSITVQEGTAGHLNFLDQNGNAISSSLVGAAGSLITVTAGDGSTTNDSFVFAGTAPTSSPALAAFAQIDSNNNPGTVANINISTTTGANSAIESIDNALNTVNNIQATLGAAQNRFTAISTTQQAESTDLSQAQSNITDANFAQETANLSKAQVLQQAGISVLAQANSLPQQVLKLLQ
SIO_010081: PDMSB3_RS37135
subclass of: SO_0000673
so part of: PDMSB3_RS37135
location: 74814..76595
location: region:74814-76595:1
so has part: feature:74814-76595:1:exon

WP_165190267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74814-76595:1:exon

PDMSB3_RS37140
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: fliD
locus tag: PDMSB3_RS37140
so part of: sequence
location: 76742..78562
location: region:76742-78562:1
so has part: feature:76742-78562:1:exon
subclass of: SO_0000010

position:76742:1
position: 76742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78562:1
position: 78562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76742-78562:1:exon

PDMSB3_RS37140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: fliD
locus tag: PDMSB3_RS37140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013340878.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0007155 - cell adhesion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar filament capping protein FliD
translation: MSTVSTASAAATTAANNAALQQAAQSIISGSTGNSSLDVSSLVTALVNSKTAGQLSALTAQQTADNTKISAVGTLKAALSALQASLTNLANGKTLASYTATASGSGLSATAGVGAVAGSYAIAVSQIAQAQTISSSAFSATAPVGTGTLNVSLGGQPMSVTIDSTNNTLSGIASAINSAANNPGVSATVVTGTDGAHLVLRSASTGAANTISISSSDAGLSSLGVTSSPVLTSGTFSSSQASQALGTGTMTISVGGKSTNLTIDGTNNTLQKIADAITNADLGVTANVVSSSSGSQQLVVTSSNGSSNSISITTSGVANDQGLSSLGSMVTTSAVTSTGGGAWKQPQSAQDALFTVDGTPVSSSTNSSTTAIAGVTLNLTAAALGTTSSSGTITGNAQTLTIASDTTSQATAITNFVSLYNTLVTTMGTLTSFDSTQAQGSQAGPLLGDSMTNTIENSLASIVSGGVKNGNVAVTLASIGITLNADGSMTTDSTALNNALTNSPATVASLFNSTNGVAAQLNNSITNFTQTGGIMDTETTAINADLTSIASQQTTLAAYTAQLTSQYQAQFTALNTLMATMNNNSQYLTQLFGGTNSAGALANGKS
SIO_010081: PDMSB3_RS37140
subclass of: SO_0000673
so part of: PDMSB3_RS37140
location: 76742..78562
location: region:76742-78562:1
so has part: feature:76742-78562:1:exon

WP_165190269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76742-78562:1:exon

PDMSB3_RS37145
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37145
old locus tag: PDMSB3_0071
so part of: sequence
location: 78584..78883
location: region:78584-78883:1
so has part: feature:78584-78883:1:exon
subclass of: SO_0000010

position:78584:1
position: 78584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78883:1
position: 78883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78584-78883:1:exon

PDMSB3_RS37145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37145
old locus tag: PDMSB3_0071
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007179992.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FliT
translation: MESRELIERLLKLSEAIEHAAQLADWPEAARRTEERSPLLMSLTGDVEDETRNIIRRIQALDESVLTLAATGKEELNTEYQEALRRAAATRQYLRTACD
SIO_010081: PDMSB3_RS37145
subclass of: SO_0000673
so part of: PDMSB3_RS37145
location: 78584..78883
location: region:78584-78883:1
so has part: feature:78584-78883:1:exon

WP_165190271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78584-78883:1:exon

PDMSB3_RS37150
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37150
old locus tag: PDMSB3_0073
so part of: sequence
location: complement(78970..79158)
location: region:78970-79158:-1
so has part: feature:78970-79158:-1:exon
subclass of: SO_0000010

position:78970:-1
position: 78970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79158:-1
position: 79158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78970-79158:-1:exon

PDMSB3_RS37150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37150
old locus tag: PDMSB3_0073
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIVITASQAAALLPLARSALLRAIMELEKAGHTDLEDEQREQNLHTIVHEWQEIVEVLSKE
SIO_010081: PDMSB3_RS37150
subclass of: SO_0000673
so part of: PDMSB3_RS37150
location: complement(78970..79158)
location: region:78970-79158:-1
so has part: feature:78970-79158:-1:exon

WP_165190273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78970-79158:-1:exon

PDMSB3_RS37155
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37155
old locus tag: PDMSB3_0075
so part of: sequence
location: 79470..80495
location: region:79470-80495:1
so has part: feature:79470-80495:1:exon
subclass of: SO_0000010

position:79470:1
position: 79470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80495:1
position: 80495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79470-80495:1:exon

PDMSB3_RS37155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37155
old locus tag: PDMSB3_0075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014192387.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MANATLVGIDLGKHCFFLHAQDAHGHEVWRKKATRTQLYTLMANCAACTVAMEACAGAHWLARKFQGFGHQVRLIAPQFVKPFVKGNKTDFADAEAICEAASRPSMRFVAIKTPEQQTLLALHRMREALVRERTATGNQIHAFLLEFGVSLPIGSVAITRLPILLDDPAHALPPPMVTLLLRLYHRFGQLSNEIVELETELKRQLAGNEAGQRLLTIPGIGPMTASSLLAMAGDVHGFRRGRDFAASLGLVPRQHSTGGRATLLGISKRGDKHLRSLLVQGARAVLRCAQRRTDALGVWVQDLLRRRHTNVVACALANKMARIVWAILARGGEYQAHPRPA
SIO_010081: PDMSB3_RS37155
subclass of: SO_0000673
so part of: PDMSB3_RS37155
location: 79470..80495
location: region:79470-80495:1
so has part: feature:79470-80495:1:exon

WP_165190275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79470-80495:1:exon

PDMSB3_RS37160
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37160
old locus tag: PDMSB3_0077
so part of: sequence
location: 80933..81154
location: region:80933-81154:1
so has part: feature:80933-81154:1:exon
subclass of: SO_0000010

position:80933:1
position: 80933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81154:1
position: 81154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80933-81154:1:exon

PDMSB3_RS37160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37160
old locus tag: PDMSB3_0077
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERFFLSRASAVAYLLGIRRATPGGIDNLRVGEADVRLQDLDTLDRLLLDVRAGRVREFRLDKPQAIEVTVTD
SIO_010081: PDMSB3_RS37160
subclass of: SO_0000673
so part of: PDMSB3_RS37160
location: 80933..81154
location: region:80933-81154:1
so has part: feature:80933-81154:1:exon

WP_165190277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80933-81154:1:exon

PDMSB3_RS37165
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37165
old locus tag: PDMSB3_0080
so part of: sequence
location: complement(81895..82155)
location: region:81895-82155:-1
so has part: feature:81895-82155:-1:exon
subclass of: SO_0000010

position:81895:-1
position: 81895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82155:-1
position: 82155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81895-82155:-1:exon

PDMSB3_RS37165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37165
old locus tag: PDMSB3_0080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGIPAGVQTIEIDGEKALALMDAPLELEEALRRWLQSRPELVREDSPQYALRIDSRERTAIPWDVWEEFLDWMQLTLAAAFNKAD
SIO_010081: PDMSB3_RS37165
subclass of: SO_0000673
so part of: PDMSB3_RS37165
location: complement(81895..82155)
location: region:81895-82155:-1
so has part: feature:81895-82155:-1:exon

WP_165190279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81895-82155:-1:exon

PDMSB3_RS37170
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37170
old locus tag: PDMSB3_0081
so part of: sequence
location: complement(82189..82515)
location: region:82189-82515:-1
so has part: feature:82189-82515:-1:exon
subclass of: SO_0000010

position:82189:-1
position: 82189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82515:-1
position: 82515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82189-82515:-1:exon

PDMSB3_RS37170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37170
old locus tag: PDMSB3_0081
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRVTIELLPDGDAELTRTLAVMTVANDDTGTPMNGHYDVELTHIEADGTTFTKTARVADFDRDRPAVDLVAAALSVVNPLKRGMASFDDRHETGKAVAAYDDDELRL
SIO_010081: PDMSB3_RS37170
subclass of: SO_0000673
so part of: PDMSB3_RS37170
location: complement(82189..82515)
location: region:82189-82515:-1
so has part: feature:82189-82515:-1:exon

WP_165190281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82189-82515:-1:exon

PDMSB3_RS37175
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37175
old locus tag: PDMSB3_0082
so part of: sequence
location: complement(82537..82914)
location: region:82537-82914:-1
so has part: feature:82537-82914:-1:exon
subclass of: SO_0000010

position:82537:-1
position: 82537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82914:-1
position: 82914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82537-82914:-1:exon

PDMSB3_RS37175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37175
old locus tag: PDMSB3_0082
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSADFDTPLRIDEAVTVHLHLDKHRRSLALHRLIAGKIRRDPALLDQVRDTVDRRMAIQPHNHADPYLIEWRVTINQGIDTTIALMTDPGEHATDLRQSAPFTGILTDDERRAFLAGWRARNPRP
SIO_010081: PDMSB3_RS37175
subclass of: SO_0000673
so part of: PDMSB3_RS37175
location: complement(82537..82914)
location: region:82537-82914:-1
so has part: feature:82537-82914:-1:exon

WP_165190283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82537-82914:-1:exon

PDMSB3_RS37180
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37180
old locus tag: PDMSB3_0083
so part of: sequence
location: complement(82921..83229)
location: region:82921-83229:-1
so has part: feature:82921-83229:-1:exon
subclass of: SO_0000010

position:82921:-1
position: 82921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83229:-1
position: 83229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82921-83229:-1:exon

PDMSB3_RS37180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37180
old locus tag: PDMSB3_0083
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIAELIDYLHAFPANARVVLPHFNSGFDDIVTVYALPIRLGTIQFGSGAHTGPDMFSDIPFEPDETAIVIDFEAATRLAEPVASQPGSAGAPRRRLGTLAG
SIO_010081: PDMSB3_RS37180
subclass of: SO_0000673
so part of: PDMSB3_RS37180
location: complement(82921..83229)
location: region:82921-83229:-1
so has part: feature:82921-83229:-1:exon

WP_165190285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82921-83229:-1:exon

PDMSB3_RS37185
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37185
old locus tag: PDMSB3_0084
so part of: sequence
location: complement(83226..83549)
location: region:83226-83549:-1
so has part: feature:83226-83549:-1:exon
subclass of: SO_0000010

position:83226:-1
position: 83226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83549:-1
position: 83549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83226-83549:-1:exon

PDMSB3_RS37185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37185
old locus tag: PDMSB3_0084
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYEIEKSASSMEGMLSISEWKARLTIDADVGAVDLVDAELVDALDAAGEAGWQGEVQGEPRIFVLPAEENFEFGFMWTGLQTTMCTVSPFFRRRLATLADNNLWSGQ
SIO_010081: PDMSB3_RS37185
subclass of: SO_0000673
so part of: PDMSB3_RS37185
location: complement(83226..83549)
location: region:83226-83549:-1
so has part: feature:83226-83549:-1:exon

WP_165190287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83226-83549:-1:exon

PDMSB3_RS37190
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37190
old locus tag: PDMSB3_0085
so part of: sequence
location: 83850..85157
location: region:83850-85157:1
so has part: feature:83850-85157:1:exon
subclass of: SO_0000010

position:83850:1
position: 83850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85157:1
position: 85157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83850-85157:1:exon

PDMSB3_RS37190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37190
old locus tag: PDMSB3_0085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020704094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HipA domain-containing protein
translation: MDCTLQIFLDDRWVDCAQIELNGRLCQWNHLVMYAVEHTAAPLSLAEPVDMDLRTGPTIPAFLYDLAPQGAGRRFLLGELKLPDGPDADFPLICSGAFNPVGRIRVAEAAEYFEAHVARHPAARGLPGLTIDDVVVRSAEFKETMFLHGMLGTGTTGVQGAAPKYLLTRDRAGLLHGDAILPDADATQHLIAKLPRGNSAADDKVLRNEAAYMRVAAALGIRTHADLPILHGDVLLVPRFDRIASDGKVLRLHQESVASILGLSGFDLRPSLFEVVAGIRKVVTDPFAETLEFIKRDVLNLAMRNTDNHARNTAVQLVEGKVRLTPLFDFAPMYLDPELIPRALRWYRPDTRVELTDWVDVLAALPVPDHERRMLARALSRFAVQIERLPDIMDAQGVDHDIIEFLTQSIDTQVRQLKALQPPEAHHAPSEPTYP
SIO_010081: PDMSB3_RS37190
subclass of: SO_0000673
so part of: PDMSB3_RS37190
location: 83850..85157
location: region:83850-85157:1
so has part: feature:83850-85157:1:exon

WP_232064478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83850-85157:1:exon

PDMSB3_RS37195
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37195
old locus tag: PDMSB3_0086
so part of: sequence
location: 85210..85434
location: region:85210-85434:1
so has part: feature:85210-85434:1:exon
subclass of: SO_0000010

position:85210:1
position: 85210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85434:1
position: 85434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85210-85434:1:exon

PDMSB3_RS37195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37195
old locus tag: PDMSB3_0086
inference: COORDINATES: protein motif:HMM:NF024949.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTIPDAMKAMREMTGLTQAEFAAHRGVSRRVIQDIERGTGNPTVDSLNSVAKLFGLQVGFVPIRRNEAASPTSS
SIO_010081: PDMSB3_RS37195
subclass of: SO_0000673
so part of: PDMSB3_RS37195
location: 85210..85434
location: region:85210-85434:1
so has part: feature:85210-85434:1:exon

WP_232064480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85210-85434:1:exon

PDMSB3_RS37200
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37200
old locus tag: PDMSB3_0087
so part of: sequence
location: 85656..86135
location: region:85656-86135:1
so has part: feature:85656-86135:1:exon
subclass of: SO_0000010

position:85656:1
position: 85656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86135:1
position: 86135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85656-86135:1:exon

PDMSB3_RS37200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37200
old locus tag: PDMSB3_0087
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRVSFDVAQASAAVKAGGVLSAILRVENGAFYIELETRESGVVELVTANGRERRTFREPGQALKVVRELGVAIGRFALEEWDTRAPKAKAWTRPDQSAHMKVKHQRADEAAEYEADVLQALAEADDPTTQFVPHDEAMSRLDAKIAEVQKKAKRKARA
SIO_010081: PDMSB3_RS37200
subclass of: SO_0000673
so part of: PDMSB3_RS37200
location: 85656..86135
location: region:85656-86135:1
so has part: feature:85656-86135:1:exon

WP_165190291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85656-86135:1:exon

PDMSB3_RS37205
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37205
old locus tag: PDMSB3_0088
so part of: sequence
location: 86132..86413
location: region:86132-86413:1
so has part: feature:86132-86413:1:exon
subclass of: SO_0000010

position:86132:1
position: 86132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86413:1
position: 86413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86132-86413:1:exon

PDMSB3_RS37205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37205
old locus tag: PDMSB3_0088
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018312156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MTVGIEVIWLPVAIEQLLSIIDHISGDNPVAAVELAQTIRAAADTLTRYPNRYRAGRINGTRELVVKPNYIIVYRVTDRVEILRVRHARRQHL
SIO_010081: PDMSB3_RS37205
subclass of: SO_0000673
so part of: PDMSB3_RS37205
location: 86132..86413
location: region:86132-86413:1
so has part: feature:86132-86413:1:exon

WP_165190293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86132-86413:1:exon

PDMSB3_RS37210
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37210
old locus tag: PDMSB3_0090
so part of: sequence
location: complement(86777..87685)
location: region:86777-87685:-1
so has part: feature:86777-87685:-1:exon
subclass of: SO_0000010

position:86777:-1
position: 86777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87685:-1
position: 87685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86777-87685:-1:exon

PDMSB3_RS37210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37210
old locus tag: PDMSB3_0090
inference: COORDINATES: protein motif:HMM:NF024244.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase domain-containing protein
translation: MSKSTSPSNRPRSIEAKFMAASLHKGAATLTRQKMRTTFLAFAAHAKQRRYGPVDPATVTEKQLRNYVHARIEVGITPRTIQNEVSHLRRALRGAGRGEWADTVTNAQLGVPAGSRIGTGRVVNADVLAQALARAPADTRAWIELERYLGLRREEMIESHRSLKQWEAALARGKSFITIRHGTKGGRVRDTVIPAPYRERALAAVRAALAIMTKRQYLVDAPTGRAAQKQVHDRFAALGLTGGDSGHALRRAFCRDNYEHYLGEGYSVKEALGLCSRDLGHGEGRGRWVWNNYLRATYEQQT
SIO_010081: PDMSB3_RS37210
subclass of: SO_0000673
so part of: PDMSB3_RS37210
location: complement(86777..87685)
location: region:86777-87685:-1
so has part: feature:86777-87685:-1:exon

WP_165190295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86777-87685:-1:exon

PDMSB3_RS37215
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37215
old locus tag: PDMSB3_0092
pseudo: true
so part of: sequence
location: complement(88804..>89013)
location: region:88804-89013:-1
so has part: feature:88804-89013:-1:exon
subclass of: SO_0000010

position:88804:-1
position: 88804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89013:-1
position: 89013
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88804-89013:-1:exon

PDMSB3_RS37215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37215
old locus tag: PDMSB3_0092
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011000219.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PDMSB3_RS37215
subclass of: SO_0000673
so part of: PDMSB3_RS37215
location: complement(88804..>89013)
location: region:88804-89013:-1
so has part: feature:88804-89013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88804-89013:-1:exon

PDMSB3_RS37220
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37220
old locus tag: PDMSB3_0093
pseudo: true
so part of: sequence
location: 89261..>89773
location: region:89261-89773:1
so has part: feature:89261-89773:1:exon
subclass of: SO_0000010

position:89261:1
position: 89261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89773:1
position: 89773
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89261-89773:1:exon

PDMSB3_RS37220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37220
old locus tag: PDMSB3_0093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_060768813.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PDMSB3_RS37220
subclass of: SO_0000673
so part of: PDMSB3_RS37220
location: 89261..>89773
location: region:89261-89773:1
so has part: feature:89261-89773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89261-89773:1:exon

PDMSB3_RS37225
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: istB
locus tag: PDMSB3_RS37225
old locus tag: PDMSB3_0094
so part of: sequence
location: complement(89887..90645)
location: region:89887-90645:-1
so has part: feature:89887-90645:-1:exon
subclass of: SO_0000010

position:89887:-1
position: 89887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90645:-1
position: 90645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89887-90645:-1:exon

PDMSB3_RS37225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: istB
locus tag: PDMSB3_RS37225
old locus tag: PDMSB3_0094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516320.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MLHHPTVERLHDLRLFGMAAALADQQSQNSIDQLGFEERLGLLVEREASERQSRLLTARLRRAKLRFPDAVPEDINYREPRALDRALLARVLTGEWIRAHQNVILVAPTGLGKSWLACALVNQACRQGFSACYLRMPKFNEEMAIAHGSGRYAKLLAQWAKTDVLVMDDLAMAPLSDAARRDLLEVLDDRHGQRSVIVTSQIPVDSWHAAIGDPTLADAILDRLVHNAHRFTLSGESMRKRRNGLTTEGEKE
SIO_010081: PDMSB3_RS37225
subclass of: SO_0000673
so part of: PDMSB3_RS37225
location: complement(89887..90645)
location: region:89887-90645:-1
so has part: feature:89887-90645:-1:exon

WP_165190297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89887-90645:-1:exon

PDMSB3_RS37230
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: istA
locus tag: PDMSB3_RS37230
old locus tag: PDMSB3_0095
so part of: sequence
location: complement(90660..92201)
location: region:90660-92201:-1
so has part: feature:90660-92201:-1:exon
subclass of: SO_0000010

position:90660:-1
position: 90660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92201:-1
position: 92201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90660-92201:-1:exon

PDMSB3_RS37230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: istA
locus tag: PDMSB3_RS37230
old locus tag: PDMSB3_0095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516321.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MSNKRLSMRQIKEVLRLRFVCQRSQREIATTIGASSATVWDYLDRARRAQLDFDKAMTMEEAALDALLFPPPPSSSRARPAPNWPMVHRELGRKGVTLDLLWNEYKAQEPEGYGYSWFCKHYERWAAVLPVTLRQTHTPGEKLFIDYSGNRLGIVDPHTGEIREAELFVATLGASNYTYAEVTWTQQLEDWIGSHVRALNFIGGCVEILVPDNLRSGVHKADFYDPILNRTYGEMAAHYSVAIIPARKRRPRDKAKVEQSVLLAQRWILARLRNQRLFSLDEANRAIAALLVELNSRPFKKLPGCRRSAFEELDRPALRPLPERPYQYAQWKVARVGIDYHVELGEHFYSVPYCHAREQVDVRYTKTTVEIFLRGQRIAAHAKNERRGHHTTIAAHMPPNHRAATTEWNPQRLINWAIDIGPHTAAVIEHLLGGRQHPQQAYRACLGVLRMGKDYSHARLEAACQRAIDLKAPNYRFIASTLKNGLESKADEAAAQTELPLAHANVRGPSYYH
SIO_010081: PDMSB3_RS37230
subclass of: SO_0000673
so part of: PDMSB3_RS37230
location: complement(90660..92201)
location: region:90660-92201:-1
so has part: feature:90660-92201:-1:exon

WP_165190299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90660-92201:-1:exon

PDMSB3_RS37235
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37235
old locus tag: PDMSB3_0096
so part of: sequence
location: 92303..92599
location: region:92303-92599:1
so has part: feature:92303-92599:1:exon
subclass of: SO_0000010

position:92303:1
position: 92303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92599:1
position: 92599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92303-92599:1:exon

PDMSB3_RS37235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37235
old locus tag: PDMSB3_0096
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESLLGLPWNRRSACCGISVRFGVEYALTAQPLPMDERLGVEQRLRELDRLGEDLHEVDKALAQASIGDERLRRLLTITGVNATVAIGLLSAIGVVER
SIO_010081: PDMSB3_RS37235
subclass of: SO_0000673
so part of: PDMSB3_RS37235
location: 92303..92599
location: region:92303-92599:1
so has part: feature:92303-92599:1:exon

WP_232064481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92303-92599:1:exon

PDMSB3_RS37240
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
locus tag: PDMSB3_RS37240
old locus tag: PDMSB3_0098
so part of: sequence
location: 92681..93169
location: region:92681-93169:1
so has part: feature:92681-93169:1:exon
subclass of: SO_0000010

position:92681:1
position: 92681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93169:1
position: 93169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92681-93169:1:exon

PDMSB3_RS37240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
locus tag: PDMSB3_RS37240
old locus tag: PDMSB3_0098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012406576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTPDELDFLPLKVTHIDEGGRRCFDPDGKRRLIEACGKPGASVAGLALKAGVNANQLRKWIMLERRRVTQIDSQKPTRMGSAEFVPVVELAEPDAVTASANLPSSPGMTPVLRPREVVRGSPLPPSPSRLVARLPNGVSLELECSGQDPALITAMIDALRSR
SIO_010081: PDMSB3_RS37240
subclass of: SO_0000673
so part of: PDMSB3_RS37240
location: 92681..93169
location: region:92681-93169:1
so has part: feature:92681-93169:1:exon

WP_165187044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92681-93169:1:exon

PDMSB3_RS37245
type: Gene
subclass of: SO_0000704
RO_0002162: 2604047
gene: tnpB
locus tag: PDMSB3_RS37245
old locus tag: PDMSB3_0099
so part of: sequence
location: 93169..93522
location: region:93169-93522:1
so has part: feature:93169-93522:1:exon
subclass of: SO_0000010

position:93522:1
position: 93522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93169-93522:1:exon

PDMSB3_RS37245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2604047
gene: tnpB
locus tag: PDMSB3_RS37245
old locus tag: PDMSB3_0099
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MLRFANDLRVYLYREPVDFRCGINTLAVLVEESMRLDPLAGAVYAFRNRKCDRIKLLLYERTGFWLLLRRLEEDRFVWPRRDEDVIELTTQQLHWLLDGIDIDALRRHPARHYEHAG
SIO_010081: PDMSB3_RS37245
subclass of: SO_0000673
so part of: PDMSB3_RS37245
location: 93169..93522
location: region:93169-93522:1
so has part: feature:93169-93522:1:exon

WP_165187046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93169-93522:1:exon