Candidatus Sneabacter namystus isolate 1621 plasmid unnamed.
type: Entry
definition: Candidatus Sneabacter namystus isolate 1621 plasmid unnamed.
sequence version: NZ_CP043313.1
sequence date: 2023-05-05
sequence: sequence
division: CON
label: NZ_CP043313.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN12491245
keyword: RefSeq
source: Candidatus Sneabacter namystus
organism: Candidatus Sneabacter namystus
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Candidatus Sneabacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP043313.1.\nAssembly not circularized.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. v3.11.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 500x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/05/2023 04:20:20\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 624\nCDSs (total) :: 585\nGenes (coding) :: 578\nCDSs (with protein) :: 578\nGenes (RNA) :: 39\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 34\nncRNAs :: 2\nPseudo Genes (total) :: 7\nCDSs (without protein) :: 7\nPseudo Genes (ambiguous residues) :: 0 of 7\nPseudo Genes (frameshifted) :: 0 of 7\nPseudo Genes (incomplete) :: 7 of 7\nPseudo Genes (internal stop) :: 0 of 7\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 27732
topology: circular
so has quality: SO_0000988
location: 1..27732
location: region:1-27732:1
RO_0002162: 2601646

NZ_CP043313
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN12491245
type: BioSample
SIO_000068: biosample

1
title: Highly reduced genomes of protist endosymbionts show evolutionary convergence
author: George, E.
author: Husnik, F.
author: Tashyreva, D.
author: Prokopchuk, G.
author: Horak, A.
author: Kwong, W.K.
author: Lukes, J.
author: Keeling, P.J.
journal: Unpublished

2
title: Direct Submission
author: George, E.
author: Husnik, F.
author: Tashyreva, D.
author: Prokopchuk, G.
author: Horak, A.
author: Kwong, W.K.
author: Lukes, J.
author: Keeling, P.J.
journal: Submitted (25-AUG-2019) Botany, University of British Columbia, 3200-6270 University Blvd., Vancouver, BC V6T 1Z4, Canada

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27732:1
position: 27732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27732:1:source
so part of: sequence
organism: Candidatus Sneabacter namystus
mol type: genomic DNA
isolate: 1621
isolation source: Shikinejima Island, Tokyo
host: Diplonemea
plasmid: unnamed
country: Japan
lat lon: 34.3244 N 139.2115 E
collection date: 2016-05-05

2601646
type: Taxonomy
SIO_000068: taxonomy

FZC37_RS03000
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03000
old locus tag: FZC37_03000
pseudo: true
so part of: sequence
location: complement(<153..479)
location: region:153-479:-1
so has part: feature:153-479:-1:exon
subclass of: SO_0000010

position:153:-1
position: 153
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:479:-1
position: 479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153-479:-1:exon

FZC37_RS03000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03000
old locus tag: FZC37_03000
inference: COORDINATES: protein motif:HMM:NF018516.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type VI secretion system ImpA family N-terminal domain-containing protein
SIO_010081: FZC37_RS03000
subclass of: SO_0000673
so part of: FZC37_RS03000
location: complement(<153..479)
location: region:153-479:-1
so has part: feature:153-479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153-479:-1:exon

FZC37_RS03005
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03005
old locus tag: FZC37_03005
so part of: sequence
location: complement(514..858)
location: region:514-858:-1
so has part: feature:514-858:-1:exon
subclass of: SO_0000010

position:514:-1
position: 514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858:-1
position: 858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514-858:-1:exon

FZC37_RS03005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03005
old locus tag: FZC37_03005
inference: COORDINATES: protein motif:HMM:NF025472.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4280 domain-containing protein
translation: MAFGLSAGGLMMCVLGAAPMPNKTLPKSKVLGPSGFFGNIMDKLPMVNIGSFVMCTLPPFPKPCTAPIASPWIPPKVKILISNMPAEDNSGKAMCSLGGMVSISVPTQFKVLFS
SIO_010081: FZC37_RS03005
subclass of: SO_0000673
so part of: FZC37_RS03005
location: complement(514..858)
location: region:514-858:-1
so has part: feature:514-858:-1:exon

WP_172619356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514-858:-1:exon

FZC37_RS03010
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03010
old locus tag: FZC37_03010
so part of: sequence
location: complement(1202..1591)
location: region:1202-1591:-1
so has part: feature:1202-1591:-1:exon
subclass of: SO_0000010

position:1202:-1
position: 1202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591:-1
position: 1591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202-1591:-1:exon

FZC37_RS03010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03010
old locus tag: FZC37_03010
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MQKMVVLDSSAVIALLEEERGHEVVQEHMQGALISSINVAEIFKYILNEKKLSEQDGISLLDTLGIKMINFDYRQAWLTATLSLRTRHKGLSLGDRACIALGMVHNLPVLTCDRIWQECELDVKIIAVR
SIO_010081: FZC37_RS03010
subclass of: SO_0000673
so part of: FZC37_RS03010
location: complement(1202..1591)
location: region:1202-1591:-1
so has part: feature:1202-1591:-1:exon

WP_148952252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1202-1591:-1:exon

FZC37_RS03015
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03015
old locus tag: FZC37_03015
so part of: sequence
location: complement(1576..1845)
location: region:1576-1845:-1
so has part: feature:1576-1845:-1:exon
subclass of: SO_0000010

position:1576:-1
position: 1576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845:-1
position: 1845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1576-1845:-1:exon

FZC37_RS03015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03015
old locus tag: FZC37_03015
inference: COORDINATES: protein motif:HMM:TIGR01439.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MKTKMVRIDKNGRMALPAKMRKQLNIVSGGNVTVEMKKDKIIISGPDTALEAARRLFNSNRKPDGSGVAKLLADRRKEFELEEEKCKKW
SIO_010081: FZC37_RS03015
subclass of: SO_0000673
so part of: FZC37_RS03015
location: complement(1576..1845)
location: region:1576-1845:-1
so has part: feature:1576-1845:-1:exon

WP_148952253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1576-1845:-1:exon

FZC37_RS03020
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03020
old locus tag: FZC37_03020
so part of: sequence
location: 2305..2823
location: region:2305-2823:1
so has part: feature:2305-2823:1:exon
subclass of: SO_0000010

position:2305:1
position: 2305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2823:1
position: 2823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2305-2823:1:exon

FZC37_RS03020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03020
old locus tag: FZC37_03020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTNFLGSKNEFVVTIDGIKPLDSKNHFGIPGSFVVRNIHFAERLRVADSLSDNTMREEFQHAALELYSPDASSANKLSATELSQLQEELVKLCKKSETKKVCMFQLVQVARDGVAADVATWEPEFTQECVGTFAMLGSSKLAFGLKAKEYTCGDGVKCANKYKLSAVGEAE
SIO_010081: FZC37_RS03020
subclass of: SO_0000673
so part of: FZC37_RS03020
location: 2305..2823
location: region:2305-2823:1
so has part: feature:2305-2823:1:exon

WP_148952254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2305-2823:1:exon

FZC37_RS03025
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03025
old locus tag: FZC37_03025
so part of: sequence
location: 2888..4216
location: region:2888-4216:1
so has part: feature:2888-4216:1:exon
subclass of: SO_0000010

position:2888:1
position: 2888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4216:1
position: 4216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2888-4216:1:exon

FZC37_RS03025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03025
old locus tag: FZC37_03025
inference: COORDINATES: protein motif:HMM:NF017730.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system contractile sheath large subunit
translation: MEKNYISLQKVQRRARILISLIDDIVEQQVRAVVKHPAFQDMLTVWSGVHYLTKSCAENITYIRIFDVKMSELTKFMDAESGIDSVISTKILNEQDIPSYSPLSLIITSYSFDLTQKTHVDILEQLALVSSYAFTPFLFDLTFNILGVQEISNLEYFSLADIDKSPLFKKACNLSSIPHSCFLFPIMPKINLPSIQKNSTKHLFLSHLELNKTVLSSGAFGVAAVIMQSFISTRWFLDMMGLPIDDTGKILPYGLIQNLVSQGVFNTKKMNIVFSKANIPFAISEKKEKELCDLGITPLSHIKNTSYVVLFNSQSLRTLYFKRQAIHFKDPSCILPYLLCACRFAAYIKIIGRNKVGEFTNAQEYQAFLNKWILQYVAANPDVKPELKRKFPLLAATIEVRKSHMLKNNYQCTMSLKPHLMSSAIATELVLKTEIDDTIKAS
SIO_010081: FZC37_RS03025
subclass of: SO_0000673
so part of: FZC37_RS03025
location: 2888..4216
location: region:2888-4216:1
so has part: feature:2888-4216:1:exon

WP_148952255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2888-4216:1:exon

FZC37_RS03030
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03030
old locus tag: FZC37_03030
so part of: sequence
location: complement(4213..5046)
location: region:4213-5046:-1
so has part: feature:4213-5046:-1:exon
subclass of: SO_0000010

position:4213:-1
position: 4213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5046:-1
position: 5046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4213-5046:-1:exon

FZC37_RS03030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03030
old locus tag: FZC37_03030
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MKIEDAKIRVPEKQDSDLEHKRKKSRTSAYTDDFVEEYYNIDATKLIPFKNQARKSFDKESLESLASTIKQHGIRQPLTVVVSPTMEGKYEIVSGERRYRAGLLVGKKTMPCIILQDYKKANEIAIIENIQRENLHPVELMQAYSNLLDEEICFSMGDIASKLGVSKSSVVEVLNLRKLSSNVRDLLLNNKIVSREFLRTLLKTPESKHEKSINNFLEYQIARKSSKKSLRKRVFSVVIDEKGMANIECAKLDHLSVAQKNDVKRLIGSVFNNNADC
SIO_010081: FZC37_RS03030
subclass of: SO_0000673
so part of: FZC37_RS03030
location: complement(4213..5046)
location: region:4213-5046:-1
so has part: feature:4213-5046:-1:exon

WP_148952256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4213-5046:-1:exon

FZC37_RS03035
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03035
old locus tag: FZC37_03035
so part of: sequence
location: complement(5054..6028)
location: region:5054-6028:-1
so has part: feature:5054-6028:-1:exon
subclass of: SO_0000010

position:5054:-1
position: 5054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6028:-1
position: 6028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5054-6028:-1:exon

FZC37_RS03035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03035
old locus tag: FZC37_03035
inference: COORDINATES: protein motif:HMM:NF013793.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MEAFFSQSVICYLSGAIPSNVSRYMTSSDISPVKRGKRKSFSYQDTRKLVKHFGYKGLVPKKKVQVFFNFKGGTGKTSVCYHISSFFALCGFNVLVVDCDPQAHLSYSWGFDIYDDYKTLYDVIVNHVPFEEAVVEVCEGVHCLPSNLSLTRLELPLNQMPNRERVFGKLISPIKDKYDFIFIDTNPTISTINRNVTLASDELNVVCETQPYSLRGLEILIDEILHLSEVMDMQISYKIIPNKYESKTATSQEALGKLRLDYKNHLMNSVIRKCEDVNVAAKRMLPVFFWGNKNSNAFEDFCDLGKEMIENSTSQGTFYNTNNQ
SIO_010081: FZC37_RS03035
subclass of: SO_0000673
so part of: FZC37_RS03035
location: complement(5054..6028)
location: region:5054-6028:-1
so has part: feature:5054-6028:-1:exon

WP_148952257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5054-6028:-1:exon

FZC37_RS03040
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03040
old locus tag: FZC37_03040
so part of: sequence
location: 6563..7729
location: region:6563-7729:1
so has part: feature:6563-7729:1:exon
subclass of: SO_0000010

position:6563:1
position: 6563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7729:1
position: 7729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6563-7729:1:exon

FZC37_RS03040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03040
old locus tag: FZC37_03040
inference: COORDINATES: protein motif:HMM:NF023069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaA N-terminal domain-containing protein
translation: MESQNKISGNIIPHEWYKVVTTCGKPDLVAITILGEVFFRHRLDNKKIFHWQVGYRYFEEKFSLSKNQVRSALLRLESLGIVKRQISTAIVNNIKHSGIVTLVFFAQKLSNLVVKNFAQDSRKFSNPLSKISNPDNKSIEYKEDLSEKKDFRLFIDQELLEKINKRTKKAFTLNFASQIIEKLNSVYPEKTFSSLLRMENYLVKVFDGEKNYKHESLTASSTCDIPFDTKVKRQILKDYSSSSIHPLILSCRFIKKENQIHVFVNVKHLSSEQEQTALNVIRNIAPECNVKFLFDKKHCVDINTCSYLGKELMQYFGKNIYSGWFSKLTLDLLTEKKCVLGVSSNFIKDWIDSNYYDTILSCIKNVNKNLHSLEVCVNDNFYDTGSYS
SIO_010081: FZC37_RS03040
subclass of: SO_0000673
so part of: FZC37_RS03040
location: 6563..7729
location: region:6563-7729:1
so has part: feature:6563-7729:1:exon

WP_148952258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6563-7729:1:exon

FZC37_RS03045
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03045
old locus tag: FZC37_03045
so part of: sequence
location: 7726..7953
location: region:7726-7953:1
so has part: feature:7726-7953:1:exon
subclass of: SO_0000010

position:7726:1
position: 7726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7953:1
position: 7953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7726-7953:1:exon

FZC37_RS03045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03045
old locus tag: FZC37_03045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MIDENGEKIWKVQEAKLRFSELLKQSFIQPQYILLSNNNECKKAVVMSLQHLEDMQAQKPSFIELMETVPCRIKV
SIO_010081: FZC37_RS03045
subclass of: SO_0000673
so part of: FZC37_RS03045
location: 7726..7953
location: region:7726-7953:1
so has part: feature:7726-7953:1:exon

WP_148952259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7726-7953:1:exon

FZC37_RS03050
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03050
old locus tag: FZC37_03050
so part of: sequence
location: 7955..8356
location: region:7955-8356:1
so has part: feature:7955-8356:1:exon
subclass of: SO_0000010

position:7955:1
position: 7955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8356:1
position: 8356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7955-8356:1:exon

FZC37_RS03050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03050
old locus tag: FZC37_03050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MYLLNHDVVFELLKSSSCDNVSNWCKAIAPSDLYISVITIGNLIKKVQKDISIQQKSLFQFWLQTNFLAWFGENVLSVDLRIIQRWGHVIPDSYTSTVDSLLIATAIEHNLVLVTSLYATNRISYLKLFNPFI
SIO_010081: FZC37_RS03050
subclass of: SO_0000673
so part of: FZC37_RS03050
location: 7955..8356
location: region:7955-8356:1
so has part: feature:7955-8356:1:exon

WP_148952260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7955-8356:1:exon

FZC37_RS03055
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03055
old locus tag: FZC37_03055
so part of: sequence
location: complement(8459..9073)
location: region:8459-9073:-1
so has part: feature:8459-9073:-1:exon
subclass of: SO_0000010

position:8459:-1
position: 8459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9073:-1
position: 9073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8459-9073:-1:exon

FZC37_RS03055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03055
old locus tag: FZC37_03055
inference: COORDINATES: protein motif:HMM:NF019284.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQDDKNSKTVITHFDNGNIESEYQLVDDQVHGMYKAFYENGMPEKQLHMKEGVLHGKYISYYENGSVEQELLFKNGELDGVCIFFDKDKQKSQISKFKDNKLHGNTLIYANGNIILLNRYKDGELNGESIGVGINNIITARINYKNGKKHGTTKAYSEDGLSLILEENYENDVLHGKRVVFHPKNGLVVSSEEYDMGSVVEAN
SIO_010081: FZC37_RS03055
subclass of: SO_0000673
so part of: FZC37_RS03055
location: complement(8459..9073)
location: region:8459-9073:-1
so has part: feature:8459-9073:-1:exon

WP_148952261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8459-9073:-1:exon

FZC37_RS03060
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03060
old locus tag: FZC37_03060
so part of: sequence
location: complement(9079..11289)
location: region:9079-11289:-1
so has part: feature:9079-11289:-1:exon
subclass of: SO_0000010

position:9079:-1
position: 9079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11289:-1
position: 11289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9079-11289:-1:exon

FZC37_RS03060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03060
old locus tag: FZC37_03060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTITIEWEAPLKDKNVYGDVAKVKGKAFCADGNYLAKLAKEDSVSSLSKISRITTDDPSPGIFQYSATGLTSNQSILDSLKDLVGKEAGFTISWKDENGAVVEKATYKGTIIDYAVADCSSSPQSDITMKEYTLVMQDNFFYKANSIKKANRIFAGEDQNLKTVIEKVFQETKLDAPTWKVTPGADSFTVQVCKQTHETNYNFIRRLCAQAGWEILLNTEGKVVISNKADYEEVKDLDSKGKVNNISLVYKGKKPDFSKVEVTARTDKGSIVKKEATINDHLDGRTNIECPCEINVQLREVKNVQILEAMAKGILHKEQNSPYFIFGKTEHIGLQVGKKIKGESLVLNASKEKNIKSKQFVIVGLNFVAENQSIVGLAPSEKIAHSAEYIAAPLGMYFTPSFMQTSASEEYDAKIVTKDGKDTGSVPAKEVLESKLQQYAQILNDEVTFKALLSTPPAATSLLKPGDIVKVRFPRTNSYEDLPRIVSALPIKDAGGEVLDREKDEDDPCSTFGTVHTKQEKDLFNYMKTDDTKDKQFFTFYAPHTMVTHVKQKRQAQVGGDKIEEQKNEKAKDFLKIDGGSVINCKDLYSITTTEKDAQITSTVAEGKYLITCKEAVITVKEKMTITCENLEVKAKDSMKFVADKDISIDAKGNLNLSSGKNTSITAKGTMSSTATGKNSISGQDVNVEGKVNCNLQAVNANVTAKANATLKANAKAAVEGSAMTAISGGIIKAG
SIO_010081: FZC37_RS03060
subclass of: SO_0000673
so part of: FZC37_RS03060
location: complement(9079..11289)
location: region:9079-11289:-1
so has part: feature:9079-11289:-1:exon

WP_148952262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9079-11289:-1:exon

FZC37_RS03065
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03065
old locus tag: FZC37_03065
so part of: sequence
location: complement(11294..13459)
location: region:11294-13459:-1
so has part: feature:11294-13459:-1:exon
subclass of: SO_0000010

position:11294:-1
position: 11294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13459:-1
position: 13459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11294-13459:-1:exon

FZC37_RS03065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03065
old locus tag: FZC37_03065
inference: COORDINATES: protein motif:HMM:NF018470.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ImcF-related family protein
translation: MKNNTLKEAFFDHFARNIQPNTETAKRSEKISVFTMFLFSVLAISFSICILILFVAYQQNVSEIHFMEEVTKNMTSSKKNTSKNVEGIRRTLNAVEKNWASLLYNFSLSNSQINKLLENKLITTTKNSCAPSLLYLSHERVQTYLSKGKWDDLLSAFRVYLMLHNKESFDIKLVSQWFYEHKDSLQQLTSTTDKEIKYILDNMSPKMFSNARIDGNLCAKIIATVQSPTLSQSVYNMIVHNLSKQPPIKVIDCIPKGMTYLLHPSITEAQMPYLYTKEGYKALKTWKKKIVNSLVGISYLENALDISVVQTALEDMEEIYKDNYENQWFSLLAKIRIKPTSNIRDFLKFSKTLSAELSTIFLLITQLEKKILIQDNSHLSNVISDVTSNILAKKDIEIEALKPEKFIQYTPLQREEAHAIKAKIQENLQEIISYSASIVSANDPNLACHRIFSAIQQEDSAIRKGETLANTLPTPIDAIYADFISGLEHLLHKHSAEHVNSVWDKKIRSYYIKHLAKKYPFCSANYNDQVNLAYFKEFFAEGGHLSTFKQEYVDKGLHLLSPDAIKAMKFFENIQNHWFAKDEQLKVAFSVTHVTIEPKVKKVAVSMCGKTTHVTHSNPGPNEFIWEDPTVDIAKVVFSTRSSPSTSIVYVGPWSWYKLLQLDHVGKSTPGKAIRRTFLSPGGEEMNFSLHFSTEFFSLCADKIKIPKEIVMTQNYHLKLE
SIO_010081: FZC37_RS03065
subclass of: SO_0000673
so part of: FZC37_RS03065
location: complement(11294..13459)
location: region:11294-13459:-1
so has part: feature:11294-13459:-1:exon

WP_148952263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11294-13459:-1:exon

FZC37_RS03070
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03070
old locus tag: FZC37_03070
so part of: sequence
location: complement(13449..14558)
location: region:13449-14558:-1
so has part: feature:13449-14558:-1:exon
subclass of: SO_0000010

position:13449:-1
position: 13449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14558:-1
position: 14558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13449-14558:-1:exon

FZC37_RS03070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03070
old locus tag: FZC37_03070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSPLLFFFQSLGLTIFSPKFIAMLLRTLFVAVLVFLFCPLLFKSLSLGNKLQIFILCVLLLELISFRLFLVTQGNINPSKTRNQTNKDFIVRSFKGFLSKKNLSLLVLSNTVSIKDFVPKDTYYELAVEDINTEHVTLLDHFSKPLVAISLDHLRDVLKNIAMHPIIQKILDVIKSNSSDTVTFVVGFQDLISMQSKNNITIAMQSCCNMLHTYMNKRFNINFVVENLHLVTGFHEICNEIYPNNPDLTSLSIPISLEDEQITFTTFESVYANFIKKVVNVIGNCHFSESDKFQLIYIFMQQLHYLKEPLKEIMAIAIKTSKISTIRTRNQIQFNIFFLGKTESVTPPEQQISLVAKDLQLCLDKNEK
SIO_010081: FZC37_RS03070
subclass of: SO_0000673
so part of: FZC37_RS03070
location: complement(13449..14558)
location: region:13449-14558:-1
so has part: feature:13449-14558:-1:exon

WP_148952264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13449-14558:-1:exon

FZC37_RS03075
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
gene: icmH
locus tag: FZC37_RS03075
old locus tag: FZC37_03075
so part of: sequence
location: complement(14555..15298)
location: region:14555-15298:-1
so has part: feature:14555-15298:-1:exon
subclass of: SO_0000010

position:14555:-1
position: 14555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15298:-1
position: 15298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14555-15298:-1:exon

FZC37_RS03075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
gene: icmH
locus tag: FZC37_RS03075
old locus tag: FZC37_03075
inference: COORDINATES: protein motif:HMM:TIGR03349.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IVB secretion system protein IcmH/DotU
translation: MNLLHSTTPNIESTFEQENEKVWDKTVIITLATKEIIYICCILNQALYAVNLSKLYALLIHKMEDLTTSLVENNFSNEEITKIRYMLCAALDEATGVYARKTEDFTAFSRSLIQYYYKENTGGEKIFNILETTLHNPIAYLPISTLGYIILATGFKGKYAISENGLTDLSDIKDRIFYAVKRALSIKEKHKKTEKQLPYNAILVKSIIKKIVPTMAVVIVIVYLVSLYNIEQKKKQLHLMIKESLEL
SIO_010081: FZC37_RS03075
subclass of: SO_0000673
so part of: FZC37_RS03075
location: complement(14555..15298)
location: region:14555-15298:-1
so has part: feature:14555-15298:-1:exon

WP_148952265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14555-15298:-1:exon

FZC37_RS03080
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
gene: tssK
locus tag: FZC37_RS03080
old locus tag: FZC37_03080
so part of: sequence
location: complement(15300..16631)
location: region:15300-16631:-1
so has part: feature:15300-16631:-1:exon
subclass of: SO_0000010

position:15300:-1
position: 15300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16631:-1
position: 16631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15300-16631:-1:exon

FZC37_RS03080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
gene: tssK
locus tag: FZC37_RS03080
old locus tag: FZC37_03080
inference: COORDINATES: protein motif:HMM:TIGR03353.2
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system baseplate subunit TssK
translation: MKTFNKVLWKDGMFMHPHHFQQQDFYVEHLISSYVNILPYASYGLFKLDLDYDALSINKILLKSCIGVLPDGTFFSAPNKDPLPQPIEIPDEFSDDMVYLGVCIDRTCQSNFNDQKFSKTQIRYLADTNTVSDMNLEQKDCVKEIEVAKLNLMLFTKKEDKNSVSYIPIVKIKDALEGITLTEEYTPPSLVVHNSQNLSSYLNKILINLNNYINASLKLLGSDNAIKHMNKTENLLVFQTIFKYTQIFTLMSKDIHLTPYKLFERLIEVLSSICIFTTENEFSKKEITYNHNKLHESFTPLLDILGNTCAKLSKQTALHLDARQQNQFFYINIPKSINLQDANCIIEIELEPQDKPKNTLLHHIKCASEEHIKSVVSARVTGLKTTLMQAVPPYVDFSENALYLNIEKSGTIWQQIIETRTLSVYVGGLITQVKIVQLWIVSV
SIO_010081: FZC37_RS03080
subclass of: SO_0000673
so part of: FZC37_RS03080
location: complement(15300..16631)
location: region:15300-16631:-1
so has part: feature:15300-16631:-1:exon

WP_148952266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15300-16631:-1:exon

FZC37_RS03085
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03085
old locus tag: FZC37_03085
so part of: sequence
location: complement(16628..17119)
location: region:16628-17119:-1
so has part: feature:16628-17119:-1:exon
subclass of: SO_0000010

position:16628:-1
position: 16628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17119:-1
position: 17119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16628-17119:-1:exon

FZC37_RS03085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03085
old locus tag: FZC37_03085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLRFPLLILCSLLLNGCIDEAKQILELLKKEPAEFMLIVDSMTMATQGMPKNLTLKVFFIRHRKLLKGTVTLPDKILEQSYKNTPKRKETKKLNVYQIIPEQMIQDSVIIPKEAERLICILNSPDRILHRREIIIDPTISSTVVVKIVGTDMYIQLATRDKS
SIO_010081: FZC37_RS03085
subclass of: SO_0000673
so part of: FZC37_RS03085
location: complement(16628..17119)
location: region:16628-17119:-1
so has part: feature:16628-17119:-1:exon

WP_148952267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16628-17119:-1:exon

FZC37_RS03090
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03090
old locus tag: FZC37_03090
so part of: sequence
location: complement(17343..18296)
location: region:17343-18296:-1
so has part: feature:17343-18296:-1:exon
subclass of: SO_0000010

position:17343:-1
position: 17343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18296:-1
position: 18296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17343-18296:-1:exon

FZC37_RS03090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03090
old locus tag: FZC37_03090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNTTVLQSQSNGDRVREIFKRLFPRKYKYWINLMETTGIMRLLPKKQTSYAELFIETNKAIQQTWRTTSNVEIRDLSDCFSRKERAQIFEALMAMNLYKEKMPSQKHYDVIILKSATQERVLRRVKYLKSMLKRGITASTVYAIVGNRELDPRHESLAHLLQMNKLPQDELAMVRCVITKHLPWSLCKTIKYIYIPNGDNTKKTSGQTLNQLWLEKFNKTYRKPNTKILVISNQPFVQYHTVSLVKTLTNNFEHIPQINGYISFKIQDDIEIEGAGPDGNSAQLALGLDALAATLDIRIPLFLKRVEKLFGEKSTT
SIO_010081: FZC37_RS03090
subclass of: SO_0000673
so part of: FZC37_RS03090
location: complement(17343..18296)
location: region:17343-18296:-1
so has part: feature:17343-18296:-1:exon

WP_148952268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17343-18296:-1:exon

FZC37_RS03095
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
gene: tssE
locus tag: FZC37_RS03095
old locus tag: FZC37_03095
so part of: sequence
location: 18630..19067
location: region:18630-19067:1
so has part: feature:18630-19067:1:exon
subclass of: SO_0000010

position:18630:1
position: 18630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19067:1
position: 19067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18630-19067:1:exon

FZC37_RS03095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
gene: tssE
locus tag: FZC37_RS03095
old locus tag: FZC37_03095
inference: COORDINATES: protein motif:HMM:TIGR03357.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system baseplate subunit TssE
translation: MYAIDILLGYITQEGDSAKAFIEGSEEAIVREIVGDVTNLLNSRPQYCMQEEESCSILGYGIPDLSQYTPYSIKDRERVVVIIQKCLERFEPRLEDLSVVPVEKQDQYTSEFHFIIRAALKVSGRYISFSADSRFDSANNTFIIR
SIO_010081: FZC37_RS03095
subclass of: SO_0000673
so part of: FZC37_RS03095
location: 18630..19067
location: region:18630-19067:1
so has part: feature:18630-19067:1:exon

WP_148952269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18630-19067:1:exon

FZC37_RS03100
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
gene: tssF
locus tag: FZC37_RS03100
old locus tag: FZC37_03100
so part of: sequence
location: 19075..20823
location: region:19075-20823:1
so has part: feature:19075-20823:1:exon
subclass of: SO_0000010

position:19075:1
position: 19075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20823:1
position: 20823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19075-20823:1:exon

FZC37_RS03100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
gene: tssF
locus tag: FZC37_RS03100
old locus tag: FZC37_03100
inference: COORDINATES: protein motif:HMM:TIGR03359.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system baseplate subunit TssF
translation: MQDPEIKKQLALRLSALYEDVKDFSKHYSDTYLGSVTENPHITRLIESFAFLHNNFLNYALDVKHSYLVSSILDLLYPHLTRPIPSVMFIKMVPDAKQEQSIFISNKTLLEVEYKEMNATFKVGYDTEVVPLAIDSIKSFNVENDKSSPTGSVSCMSLLVSSTNDHSIDTLGVKKIRFFLQDIKHISYMLYESLFSYLTGIIIEDETSCKKVVLSKESVSSVGLKLDENLLYHNNKTFPGYLFLTEFFLFPQKFLFFDLNVENKLSNFSSSVKIKFYFSNHFVIDSVSNNTLAMNVIPTINLFEKESDPVVMEDGKIEYPLIIDKQKPQQYSIYSIQKVVVGLGDEQMLAKPLAQSASETSDTILWHVERKTSASLNSVPYISFVTKNSTKEKPYFYANALCFNGNIPYEIFLTSQRQVQLRFMDDTILTGKIEVIKNPSKVQYICSNVDKKIQVLTHLSAHYISIIGSDVKGFLKDIISVYQGAIPALNNSILDSIADVAVETAVERVNTVNGPKFCTGFLCKVVFVLPEKSDIDRGVLYLFSQIFEKVLIYYCSMNSFIKLNTYISDQALYVGPLRISST
SIO_010081: FZC37_RS03100
subclass of: SO_0000673
so part of: FZC37_RS03100
location: 19075..20823
location: region:19075-20823:1
so has part: feature:19075-20823:1:exon

WP_148952270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19075-20823:1:exon

FZC37_RS03105
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03105
old locus tag: FZC37_03105
so part of: sequence
location: 20820..21821
location: region:20820-21821:1
so has part: feature:20820-21821:1:exon
subclass of: SO_0000010

position:20820:1
position: 20820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21821:1
position: 21821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20820-21821:1:exon

FZC37_RS03105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03105
old locus tag: FZC37_03105
inference: COORDINATES: protein motif:HMM:NF018675.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system baseplate subunit TssG
translation: MISIKTCKAEKYFSDDLDFESLVKYLELFRSTQEQGCEIKFSCYLKSRLDHNGIANISYFHDARGVGKHTYNISSSMLSLIGSNGVFPSHYTDFAIAKKKEGDASLSDFLDIFYNRIMTLLYRVIKWNDLYLNFQQCLLGSKKQTPRLVSEISSYIGIKYNDTTKPLHILLGYGGGFAFKTRPAFFIKAMLSEILDSEVDLRQFIPLVIPLKDEQKAILGRQNSILGVSFYIGSNIYLYQNKILIKINHLNLNQYEKIYSSLQMKNSKVINILNVYLGYKSKYEIQFDVDASHQVNQLSGNHPAILGKMAWCRSAQISYPTSCTNKELSTLEL
SIO_010081: FZC37_RS03105
subclass of: SO_0000673
so part of: FZC37_RS03105
location: 20820..21821
location: region:20820-21821:1
so has part: feature:20820-21821:1:exon

WP_148952271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20820-21821:1:exon

FZC37_RS03110
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03110
old locus tag: FZC37_03110
so part of: sequence
location: complement(21854..24760)
location: region:21854-24760:-1
so has part: feature:21854-24760:-1:exon
subclass of: SO_0000010

position:21854:-1
position: 21854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24760:-1
position: 24760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21854-24760:-1:exon

FZC37_RS03110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03110
old locus tag: FZC37_03110
inference: COORDINATES: protein motif:HMM:NF019344.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MQISTKSLIKKLDHSSIKALEAAINLAVTRKTSEVSVAHFLCKVAEDSNSLFCALLQKADIKPEDFIRAISPSAYDLRGTHKGVPSLSTALTTLIHDGWSLASVDYQSQEINSGHICICFLSNTSGFYINSLTQALLKNVDIEMLKSTLHDLIKERDEKKVSGMELPADGLGADENNTLRKFTVDLVAEAAQGKIDRAIGRGKELNQIMDILCRRKQSNPVLVGEAGTGKTSVVLELAHRILAKQVPDLLQNASLRSLDVAALHAGASVQGEFESRIKDLLSAIEKSEKKIILFVDEIHNFLGASGKGADAANLLKPALAGGLSVIGATTWAEYKKFFEKDAALSRRFQLVKVLEPDEEHTVDIMRGVAQLLEKHHSVHITDKAIINSVNLSARYLTHLRLPDKAVSLLDSSCARVKIQNSLPPLSLRQLQEKINIKKHLKKRIEKDFFATDVSVQSIEDEINSMQKEFDDAAKRWQEQIEIVSEMMLARKNKDKEAYLIQSQVLQNAQKESDTISECVDEHVVADVLTNWTGIPVSSKGQEQELINVLTLDDKIAERVIGQQHAVERIVDSIRISKANMSDARKPIGVFLLVGESGVGKTETALSIAEVIYGHESRIITINMSEYKEGHKVASLIGAPPGYVGYGEGGRLTEQVRRNPYSVILLDEIEKAHPNVQELFLQVFDKGTLADSEGVVVDFKNTVIILTSNLGAKTVRDFCLGKYEEHRKRKQKQEENEQNASLDSEDSVDNAVGDGGARAAQFEEEKDLKNGEENEQDDTQQQDQKCDNTQEDGKNDEVNEKGQDEEEGQEEEPEEEKEHVIQDSDIKKLTETVHTELLKHLKPEFIGRLVVVPYLSLTHETLRGIIRIHLKRIEKRLNDNHEADLTYDDSVVEKILADCAISPMGARQIEHIISEKIMPDLAIAILDIKSQGMRFGQVNLSVRFGHFLIEMKKVTKDQKINVENIQSSG
SIO_010081: FZC37_RS03110
subclass of: SO_0000673
so part of: FZC37_RS03110
location: complement(21854..24760)
location: region:21854-24760:-1
so has part: feature:21854-24760:-1:exon

WP_148952272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21854-24760:-1:exon

FZC37_RS03115
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
gene: tssC
locus tag: FZC37_RS03115
old locus tag: FZC37_03115
so part of: sequence
location: complement(24828..26318)
location: region:24828-26318:-1
so has part: feature:24828-26318:-1:exon
subclass of: SO_0000010

position:24828:-1
position: 24828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26318:-1
position: 26318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24828-26318:-1:exon

FZC37_RS03115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
gene: tssC
locus tag: FZC37_RS03115
old locus tag: FZC37_03115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005396386.1
GO component: GO:0033104 - type VI protein secretion system complex [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system contractile sheath large subunit
translation: MSTEGQKEESQSAETASEQVSILDEVLEATSADSDKDYTEGLIKILADEAIKGSVTWEKSIIKTVEFAIAKMDQIVSDQVRTVMHHPDFQKLEGTWRGLHYMVKNTLCSAQLKIKVLNVDKKTLLKDFDKAVEFDQSQLFKKVYEEEYGTAGGAPYSTLVADYEFKNHPQDISLLKYLSEVSAAAFAPCITAADSSVMGMKSWKELGDPTDLERIFDSPLYAQWNNFRKSDESRFITLTMPRTLARVPYGSATCPIEDFSYEEFETRNDGLSLQTDASKYCWMNSAFVYGAVLTRAFSEFGWCTAIRGVENGGKVESLPVHTFLSDDGEIDLSCPTEIGITDRREAELSKLGFLPLCHYKGEDYSVFFGAQTMNKPAQYDDPDATANSEIAARIPYIFATSRIAHYLKVIARDKIGSFMERTDVESWLNKWIFNYVNSNPDSGQALKARYPLADAKVVVEEVPGKPGSYNAVAYLRPWLQLEELTTSLRLVAKIPG
SIO_010081: FZC37_RS03115
subclass of: SO_0000673
so part of: FZC37_RS03115
location: complement(24828..26318)
location: region:24828-26318:-1
so has part: feature:24828-26318:-1:exon

WP_148952273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24828-26318:-1:exon

FZC37_RS03120
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
gene: tssB
locus tag: FZC37_RS03120
old locus tag: FZC37_03120
so part of: sequence
location: complement(26356..26907)
location: region:26356-26907:-1
so has part: feature:26356-26907:-1:exon
subclass of: SO_0000010

position:26356:-1
position: 26356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26907:-1
position: 26907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26356-26907:-1:exon

FZC37_RS03120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
gene: tssB
locus tag: FZC37_RS03120
old locus tag: FZC37_03120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014747169.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system contractile sheath small subunit
translation: MAQSIYDKIKKVRKPRVQISYEVEDGGATVKKELPFVVGVLGDFSGKPVKPLKALKKRKFVNIHGENFNEVMSSMTPGVEIRVENKVTNDGTELPVKLAFNSMDDFSPGKVAQGIEPLKKLMDIRAQLKELLSKAERSEKLEAALEKVLSSEENLKSISEAFKDKGDSDADGDQAPDEEKPTE
SIO_010081: FZC37_RS03120
subclass of: SO_0000673
so part of: FZC37_RS03120
location: complement(26356..26907)
location: region:26356-26907:-1
so has part: feature:26356-26907:-1:exon

WP_148952274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26356-26907:-1:exon

FZC37_RS03125
type: Gene
subclass of: SO_0000704
RO_0002162: 2601646
locus tag: FZC37_RS03125
old locus tag: FZC37_03125
so part of: sequence
location: complement(26942..>27632)
location: region:26942-27632:-1
so has part: feature:26942-27632:-1:exon
subclass of: SO_0000010

position:26942:-1
position: 26942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27632:-1
position: 27632
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26942-27632:-1:exon

FZC37_RS03125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2601646
locus tag: FZC37_RS03125
old locus tag: FZC37_03125
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 2
transl table: 11
product: hypothetical protein
translation: PTHSDELLNAWSVRQMLEESDGAKDLRSEILESIDEIKSVISVIDKAGFIQVEKDVLECEKAFEQFDSALSKVFSRHAPKLQQVSQSLTYCVSLVKGIKEIIQKREEEEARQAAAALAEKERLAALSEGGVGGSPAATSSLALESLSPDQLNKEQALSLLVVLSKFFKNSDPHSPIAYSLERIERWAKLSLPEMMLDIVSSDVMMSYCKITGVPFAKSGNEERDGDYYD
SIO_010081: FZC37_RS03125
subclass of: SO_0000673
so part of: FZC37_RS03125
location: complement(26942..>27632)
location: region:26942-27632:-1
so has part: feature:26942-27632:-1:exon

WP_172619358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26942-27632:-1:exon