Microvenator marinus strain V1718 chromosome, complete genome.
Bacteria; Deltaproteobacteria; Bradymonadales; Microvenatoraceae; Microvenator.
Submitted (05-AUG-2019) College of Marine Science, Shandong University at Weihai, 180 Wen Hua Xi Lu, Weihai 264209, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP042467.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nBacteria and source DNA available from the Lab of Zong-jun Du.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT Link v. 5.0.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 350.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/27/2023 02:42:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,853\nCDSs (total) :: 4,797\nGenes (coding) :: 4,758\nCDSs (with protein) :: 4,758\nGenes (RNA) :: 56\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 3\nPseudo Genes (total) :: 39\nCDSs (without protein) :: 39\nPseudo Genes (ambiguous residues) :: 0 of 39\nPseudo Genes (frameshifted) :: 2 of 39\nPseudo Genes (incomplete) :: 38 of 39\nPseudo Genes (internal stop) :: 2 of 39\nPseudo Genes (multiple problems) :: 2 of 39\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0015616 - DNA translocase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF025141.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012708.2
GO:0051219 - phosphoprotein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:TIGR01770.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01972.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF005141.0
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF004320.0
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: protein motif:HMM:NF010120.0
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: protein motif:HMM:TIGR01958.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: protein motif:HMM:NF025054.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00649.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004540 - RNA nuclease activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016955.2
TerB family tellurite resistance protein
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: protein motif:HMM:NF040105.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012304.2
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF014665.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0006784 - heme A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024572.2
GO:0005515 - protein binding [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
GO:0004672 - protein kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:TIGR00070.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024785.2
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: protein motif:HMM:NF013106.2
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF002634.0
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001490.0
GO:0008252 - nucleotidase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF012488.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00420.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF014470.2
GO:0015031 - protein transport [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR00255.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03263.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00691.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA]
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF001399.0
GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007302170.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016448039.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: protein motif:HMM:NF002874.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:NF001413.0
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00374.1
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF018743.2
COORDINATES: protein motif:HMM:NF022188.2
Rossmann-like and DUF2520 domain-containing protein
COORDINATES: protein motif:HMM:NF019344.2
COORDINATES: protein motif:HMM:TIGR00004.1
GO:0019239 - deaminase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015376.2
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.; Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR03598.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:NF002320.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IEA]; GO:0009165 - nucleotide biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF025637.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF039815.1
COORDINATES: protein motif:HMM:NF013003.2
COORDINATES: protein motif:HMM:NF014629.2
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:NF015402.2
COORDINATES: protein motif:HMM:NF012869.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter ATP-binding protein/permease
COORDINATES: protein motif:HMM:NF013134.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014758.2
COORDINATES: protein motif:HMM:NF015131.2
COORDINATES: protein motif:HMM:NF008744.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015898.2
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:TIGR00914.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF007763.0
GO:0140078 - class I DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000703 - oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03156.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:TIGR02734.1
GO:0016166 - phytoene dehydrogenase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: protein motif:HMM:NF012596.2
GO:0003824 - catalytic activity [Evidence IEA]
enoyl-CoA hydratase/isomerase family protein
COORDINATES: protein motif:HMM:NF014068.2
GO:0019172 - glyoxalase III activity [Evidence IEA]
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: protein motif:HMM:NF016435.2
COORDINATES: protein motif:HMM:NF025594.2
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: protein motif:HMM:NF013989.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023425.2
COORDINATES: protein motif:HMM:NF012514.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024810.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF019886.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF038283.1
viperin family antiviral radical SAM protein
COORDINATES: protein motif:HMM:NF025442.2
COORDINATES: protein motif:HMM:NF020376.2
COORDINATES: protein motif:HMM:NF038317.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF001221.0
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004328438.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019456581.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:NF019334.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017442.2
COORDINATES: protein motif:HMM:NF024852.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF000818.0
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF013725.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014641.2
GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00562.1
GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012964.2
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: protein motif:HMM:TIGR01953.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF013417.2
COORDINATES: protein motif:HMM:TIGR00487.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: protein motif:HMM:TIGR01292.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00653.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012753.2
COORDINATES: protein motif:HMM:TIGR00046.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018076.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:TIGR00036.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: protein motif:HMM:NF012904.2
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF024754.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012200.0
choice-of-anchor D domain-containing protein
COORDINATES: protein motif:HMM:NF025053.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF027681.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF021387.2
GO:0050043 - lactate racemase activity [Evidence IEA]
lactate racemase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01490.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016791 - phosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00051.1
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012436.2
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013607.2
GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
low molecular weight protein-tyrosine-phosphatase
COORDINATES: protein motif:HMM:TIGR02796.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020480666.1
COORDINATES: protein motif:HMM:NF024503.2
TonB C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015980.2
COORDINATES: protein motif:HMM:NF017939.2
COORDINATES: protein motif:HMM:NF014427.2
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: protein motif:HMM:NF000586.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF014774.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: protein motif:HMM:NF013094.2
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:TIGR01134.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021981.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_146956849.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:TIGR03303.1
GO:0009279 - cell outer membrane [Evidence IEA]
outer membrane protein assembly factor BamA
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR04565.1
outer membrane beta-barrel domain-containing protein
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016291381.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002032.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: protein motif:HMM:NF009475.0
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013618.2
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
lytic transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00560.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF016271.2
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
penicillin-insensitive murein endopeptidase
COORDINATES: protein motif:HMM:NF025343.2
COORDINATES: protein motif:HMM:NF021355.2
beta-propeller domain-containing protein
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF024660.2
PHP-associated domain-containing protein
COORDINATES: protein motif:HMM:NF016102.2
COORDINATES: protein motif:HMM:TIGR00414.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF008805.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292151.1
COORDINATES: protein motif:HMM:NF012314.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF025178.2
COORDINATES: protein motif:HMM:NF015758.2
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:TIGR04201.1
COORDINATES: protein motif:HMM:NF016895.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013663.2
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014564.2
CaiB/BaiF CoA-transferase family protein
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: protein motif:HMM:NF012630.2
GO:0031012 - extracellular matrix [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013129.2
COORDINATES: similar to AA sequence:RefSeq:WP_001692972.1
COORDINATES: protein motif:HMM:NF015289.2
EutN/CcmL family microcompartment protein
COORDINATES: protein motif:HMM:NF011927.0
COORDINATES: protein motif:HMM:NF014826.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0006465 - signal peptide processing [Evidence IEA]
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017319.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF028007.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF008453.0
COORDINATES: similar to AA sequence:RefSeq:WP_017953349.1
COORDINATES: protein motif:HMM:NF012738.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: protein motif:HMM:TIGR00459.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01016.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018287377.1
COORDINATES: protein motif:HMM:NF001908.0
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF014466.2
GO:0005509 - calcium ion binding [Evidence IEA]
GO:0007155 - cell adhesion [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
thrombospondin type 3 repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_263577165.1
COORDINATES: similar to AA sequence:RefSeq:WP_263577166.1
COORDINATES: protein motif:HMM:NF018624.2
COORDINATES: protein motif:HMM:NF019325.2
COORDINATES: protein motif:HMM:NF018894.2
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003296.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292428.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF025690.2
COORDINATES: protein motif:HMM:TIGR00150.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF025885.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma 54-interacting transcriptional regulator
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:TIGR02757.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04563.1
COORDINATES: protein motif:HMM:NF018504.2
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:NF012640.2
anthranilate synthase component I family protein
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: protein motif:HMM:TIGR00566.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]; GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF017568.2
COORDINATES: protein motif:HMM:TIGR00261.1
COORDINATES: protein motif:HMM:NF019284.2
toxin-antitoxin system YwqK family antitoxin
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014216.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - RNA nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: protein motif:HMM:NF014605.2
MazG nucleotide pyrophosphohydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF013406.2
GO:0005283 - amino acid:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
alanine/glycine:cation symporter family protein
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:TIGR03625.1
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013382.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016291787.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000848.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF015607.2
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033768.1
AgmX/PglI C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013283.2
GO:0019867 - outer membrane [Evidence IEA]
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:NF014533.2
GO:0009294 - DNA-mediated transformation [Evidence IEA]
alanine--glyoxylate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR00184.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: protein motif:HMM:NF014790.2
COORDINATES: similar to AA sequence:RefSeq:WP_016293396.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020967.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017953348.1
COORDINATES: protein motif:HMM:TIGR00878.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:NF012745.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04282.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
TIGR04282 family arsenosugar biosynthesis glycosyltransferase
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR01499.1
COORDINATES: protein motif:HMM:NF015912.2
RNA polymerase sigma factor region1.1 domain-containing protein
COORDINATES: protein motif:HMM:TIGR02795.1
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012632.2
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: protein motif:HMM:NF021188.2
polyhydroxyalkanoic acid system family protein
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: protein motif:HMM:TIGR00113.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_012270584.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00739.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01129.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:TIGR00630.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF024879.2
glycine zipper domain-containing protein
COORDINATES: protein motif:HMM:NF004491.0
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015506.2
COORDINATES: protein motif:HMM:NF015956.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF013143.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF040873.1
zinc ABC transporter ATP-binding protein AztA
COORDINATES: protein motif:HMM:NF013465.2
metal ABC transporter substrate-binding protein
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF009455.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002355133.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013473.2
COORDINATES: protein motif:HMM:NF013843.2
low molecular weight phosphotyrosine protein phosphatase
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:TIGR02824.1
COORDINATES: protein motif:HMM:NF007972.0
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016156.2
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF024850.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
COORDINATES: protein motif:HMM:NF012730.2
GO:0006813 - potassium ion transport [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF013930.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
CHC2 zinc finger domain-containing protein
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF006367.0
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: protein motif:HMM:NF019850.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018190.2
carbohydrate-binding family 9-like protein
COORDINATES: protein motif:HMM:TIGR03594.1
COORDINATES: protein motif:HMM:TIGR00436.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013781.2
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020295.2
COORDINATES: protein motif:HMM:TIGR01994.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_020359689.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0006534 - cysteine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: similar to AA sequence:RefSeq:WP_002514361.1
COORDINATES: protein motif:HMM:NF008773.0
COORDINATES: protein motif:HMM:TIGR00738.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF015915.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF013665.2
GO:0004471 - malate dehydrogenase (decarboxylating) (NAD+) activity [Evidence IEA]; GO:0004470 - malic enzyme activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00575.1
GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF024876.2
COORDINATES: protein motif:HMM:NF016959.2
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00044.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF014591.2
COORDINATES: protein motif:HMM:NF006444.0
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: protein motif:HMM:TIGR00228.1
GO:0008821 - crossover junction DNA endonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:TIGR00084.2
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: protein motif:HMM:NF000868.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:NF013398.2
COORDINATES: protein motif:HMM:NF019604.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00344.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:TIGR00056.1
COORDINATES: protein motif:HMM:NF014460.2
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:NF016800.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF012387.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF021733.2
COORDINATES: protein motif:HMM:NF025892.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF026927.2
COORDINATES: protein motif:HMM:NF013252.2
COORDINATES: protein motif:HMM:TIGR00730.1
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:TIGR02151.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:NF002270.0
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: protein motif:HMM:NF001567.0
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:NF014881.2
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:TIGR00091.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF001886.0
COORDINATES: protein motif:HMM:NF016584.2
GO:0005576 - extracellular region [Evidence IEA]
GO:0007275 - multicellular organism development [Evidence IEA]; GO:0030178 - negative regulation of Wnt signaling pathway [Evidence IEA]
Dickkopf N-terminal cysteine-rich domain-containing protein
COORDINATES: protein motif:HMM:TIGR00050.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00065.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF007009.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:NF002378.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:TIGR02614.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00445.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF016860.2
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00006.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR00242.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:TIGR00005.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:NF012797.2
GO:0003723 - RNA binding [Evidence IEA]; GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF002290.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: protein motif:HMM:TIGR01737.1
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: protein motif:HMM:TIGR00302.1
phosphoribosylformylglycinamidine synthase subunit PurS
COORDINATES: protein motif:HMM:NF006868.0
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:TIGR00928.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF015945.2
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:TIGR00619.1
GO:0004527 - exonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF015746.2
GO:0015558 - secondary active p-aminobenzoyl-glutamate transmembrane transporter activity [Evidence IEA]
GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: protein motif:HMM:NF022182.2
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO:0030551 - cyclic nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012616.2
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF012791.2
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006870.0
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF013086.2
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022750.2
COORDINATES: protein motif:HMM:NF014114.2
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: protein motif:HMM:NF012673.2
GO:0008934 - inositol monophosphate 1-phosphatase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006020 - inositol metabolic process [Evidence IEA]; GO:0046855 - obsolete inositol phosphate dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024915.2
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: protein motif:HMM:TIGR00418.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF008113.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:NF019042.2
COORDINATES: protein motif:HMM:NF013225.2
GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020397.2
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_012096464.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF010200.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
GO:0035998 - 7,8-dihydroneopterin 3'-triphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00857.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00195.1
GO:0008311 - double-stranded DNA 3'-5' DNA exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020290.2
GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF012621.2
heavy metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF013702.2
COORDINATES: protein motif:HMM:NF018597.2
COORDINATES: protein motif:HMM:NF012743.2
COORDINATES: protein motif:HMM:NF038074.1
COORDINATES: protein motif:HMM:NF038075.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006067.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF038073.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:TIGR00253.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00029.2
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01241.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: protein motif:HMM:NF012946.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF028121.2
TRAP transporter TatT component family protein
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016200.2
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018513.2
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01932.1
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01933.1
COORDINATES: protein motif:HMM:NF023418.2
DUF3488 and transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR02074.1
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF015692.2
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF016041.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: protein motif:HMM:NF013362.2
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF016262.2
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: protein motif:HMM:NF013046.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF028259.2
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: protein motif:HMM:NF008900.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF009288.0
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter subunit A
COORDINATES: protein motif:HMM:NF006372.0
COORDINATES: protein motif:HMM:NF009309.0
monovalent cation/H+ antiporter subunit D
COORDINATES: protein motif:HMM:NF014012.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF004812.0
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF009316.0
COORDINATES: protein motif:HMM:NF013706.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:TIGR01262.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024030.2
COORDINATES: protein motif:HMM:NF019222.2
COORDINATES: protein motif:HMM:NF019259.2
COORDINATES: protein motif:HMM:NF025939.2
COORDINATES: protein motif:HMM:NF004846.0
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF013691.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00430.1
COORDINATES: protein motif:HMM:NF012337.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_263577169.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF013250.2
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: similar to AA sequence:RefSeq:WP_016293128.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF013125.2
COORDINATES: protein motif:HMM:NF025086.2
COORDINATES: protein motif:HMM:NF018757.2
COORDINATES: protein motif:HMM:TIGR02095.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004126.0
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF017743.2
COORDINATES: protein motif:HMM:NF014585.2
hydantoinase B/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF012434.2
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: protein motif:HMM:TIGR00518.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: protein motif:HMM:TIGR01081.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF015316.2
outer membrane protein transport protein
COORDINATES: protein motif:HMM:NF023683.2
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01399.1
type III secretion system export apparatus subunit SctV
COORDINATES: protein motif:HMM:NF014448.2
COORDINATES: protein motif:HMM:NF004208.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: protein motif:HMM:NF001401.0
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00472.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00468.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012095718.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000973215.1
COORDINATES: protein motif:HMM:NF001380.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00163.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017142.2
COORDINATES: protein motif:HMM:NF025597.2
COORDINATES: protein motif:HMM:NF014697.2
COORDINATES: protein motif:HMM:TIGR01280.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:TIGR02181.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00159.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: protein motif:HMM:NF008139.0
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006762396.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02093.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:NF017009.2
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:NF015510.2
GO:0044874 - lipoprotein localization to outer membrane [Evidence IEA]; GO:0042953 - lipoprotein transport [Evidence IEA]
outer membrane lipoprotein carrier protein LolA
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:NF018485.2
COORDINATES: protein motif:HMM:NF025875.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012602.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF015851.2
NrfD/PsrC family molybdoenzyme membrane anchor subunit
COORDINATES: protein motif:HMM:NF023249.2
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: protein motif:HMM:TIGR02891.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: protein motif:HMM:NF015582.2
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:NF003349.0
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0048034 - heme O biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003465.0
COORDINATES: protein motif:HMM:NF014193.2
COORDINATES: similar to AA sequence:RefSeq:WP_016291128.1
COORDINATES: protein motif:HMM:NF022281.2
COORDINATES: protein motif:HMM:NF025384.2
ABC transporter transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF008035.0
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF005489.0
COORDINATES: protein motif:HMM:NF013714.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF019430.2
GO:0042597 - periplasmic space [Evidence IEA]
Spy/CpxP family protein refolding chaperone
COORDINATES: protein motif:HMM:NF006186.0
GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA synthase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019976.2
nuclease-related domain-containing protein
COORDINATES: protein motif:HMM:NF011291.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF014228.2
GO:0070403 - NAD+ binding [Evidence IEA]
Sir2 family NAD-dependent protein deacetylase
COORDINATES: protein motif:HMM:NF036933.2
COORDINATES: similar to AA sequence:RefSeq:WP_002439184.1
GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF019271.2
COORDINATES: protein motif:HMM:NF015331.2
COORDINATES: protein motif:HMM:TIGR02147.1
COORDINATES: protein motif:HMM:TIGR01099.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: protein motif:HMM:NF013915.2
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00229.1
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004244664.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016152.2
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF012305.2
COORDINATES: protein motif:HMM:TIGR00357.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF012503.2
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF023580.2
GO:0016018 - cyclosporin A binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF013784.2
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
FMN-binding glutamate synthase family protein
COORDINATES: protein motif:HMM:NF005869.0
GuaB1 family IMP dehydrogenase-related protein
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: protein motif:HMM:NF024869.2
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF020804.2
small ribosomal subunit Rsm22 family protein
COORDINATES: protein motif:HMM:NF012372.2
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF004952.0
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014300.2
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0006298 - mismatch repair [Evidence IEA]
MYXO-CTERM sorting domain-containing protein
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF016875.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:TIGR02607.1
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:NF040143.1
COORDINATES: protein motif:HMM:TIGR00178.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF039186.1
lycopene cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:TIGR01443.1
COORDINATES: protein motif:HMM:NF024854.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF013487.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02148.1
COORDINATES: protein motif:HMM:NF011635.0
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
hydrogen peroxide-inducible genes activator
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: protein motif:HMM:NF002098.0
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008750.0
COORDINATES: protein motif:HMM:NF006673.0
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF015722.2
formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:TIGR02376.1
GO:0050421 - nitrite reductase (NO-forming) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021021.2
COORDINATES: protein motif:HMM:TIGR01581.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015378.2
COORDINATES: protein motif:HMM:NF016143.2
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: similar to AA sequence:RefSeq:WP_001239389.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011829936.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF024921.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR02033.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013636.2
proprotein convertase P-domain-containing protein
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:NF036525.2
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF013695.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF037241.2
COORDINATES: protein motif:HMM:NF019351.2
COORDINATES: protein motif:HMM:NF021505.2
COORDINATES: protein motif:HMM:NF017119.2
COORDINATES: protein motif:HMM:TIGR01480.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
copper resistance system multicopper oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_008063311.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000509876.1
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF021563.2
COORDINATES: protein motif:HMM:NF012273.2
COORDINATES: similar to AA sequence:RefSeq:WP_003776553.1
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: similar to AA sequence:RefSeq:WP_013362653.1
GO:0043295 - glutathione binding [Evidence IEA]; GO:0004602 - glutathione peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00266.1
COORDINATES: protein motif:HMM:NF017475.2
COORDINATES: protein motif:HMM:TIGR02232.1
myxococcus cysteine-rich repeat containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011906133.1
COORDINATES: protein motif:HMM:TIGR00589.1
bifunctional helix-turn-helix domain-containing protein/methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:TIGR03652.1
GO:0005506 - iron ion binding [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
iron-sulfur cluster repair di-iron protein
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF012699.2
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF025006.2
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: protein motif:HMM:NF025029.2
murein L,D-transpeptidase catalytic domain family protein
COORDINATES: protein motif:HMM:NF017493.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004333 - fumarate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF011765.0
GO:0004089 - carbonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014080.2
winged helix-turn-helix domain-containing protein
GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008731.0
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione-dependent disulfide-bond oxidoreductase
COORDINATES: protein motif:HMM:NF017536.2
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033510.3
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: protein motif:HMM:NF013390.2
GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF024685.2
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00367.1
COORDINATES: protein motif:HMM:NF021982.2
GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
calcium-binding EGF-like domain-containing protein
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF012437.2
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019819.2
COORDINATES: protein motif:HMM:NF012280.2
Kazal-type serine protease inhibitor domain-containing protein
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017953234.1
COORDINATES: protein motif:HMM:TIGR00234.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019040.2
COORDINATES: protein motif:HMM:NF019256.2
COORDINATES: protein motif:HMM:NF012497.2
COORDINATES: protein motif:HMM:NF019339.2
COORDINATES: protein motif:HMM:NF012382.2
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF008808.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
COORDINATES: protein motif:HMM:NF025711.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03330.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002010.0
COORDINATES: protein motif:HMM:TIGR01230.1
GO:0008783 - agmatinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03719.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:NF012913.2
COORDINATES: protein motif:HMM:NF021998.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012880.2
dehydrogenase E1 component subunit alpha/beta
COORDINATES: protein motif:HMM:NF016056.2
COORDINATES: protein motif:HMM:NF016286.2
ClpXP protease specificity-enhancing factor SspB
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: protein motif:HMM:NF013237.2
PLP-dependent aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR00496.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005328724.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00116.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006236109.1
COORDINATES: protein motif:HMM:TIGR00461.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase
COORDINATES: protein motif:HMM:NF014708.2
COORDINATES: protein motif:HMM:NF012369.2
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: protein motif:HMM:NF037170.2
COORDINATES: protein motif:HMM:NF020893.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF012863.2
COORDINATES: protein motif:HMM:NF013253.2
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: protein motif:HMM:TIGR02100.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005544 - calcium-dependent phospholipid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012861.2
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF002541.0
COORDINATES: protein motif:HMM:NF019311.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF025316.2
COORDINATES: protein motif:HMM:NF007914.0
COORDINATES: protein motif:HMM:TIGR00235.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012958.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_263577171.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF009789.0
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: protein motif:HMM:NF012862.2
COORDINATES: protein motif:HMM:NF008292.0
GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_263577181.1
COORDINATES: protein motif:HMM:TIGR00413.1
septal ring lytic transglycosylase RlpA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_263577176.1
COORDINATES: protein motif:HMM:TIGR00088.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024483.2
COORDINATES: similar to AA sequence:RefSeq:WP_005606737.1
COORDINATES: protein motif:HMM:TIGR00365.1
COORDINATES: protein motif:HMM:NF013851.2
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: protein motif:HMM:NF014757.2
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: protein motif:HMM:TIGR01930.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF009554.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04283.1
TIGR04283 family arsenosugar biosynthesis glycosyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: protein motif:HMM:NF024645.2
COORDINATES: protein motif:HMM:NF014601.2
2-dehydropantoate 2-reductase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: protein motif:HMM:NF015983.2
B12-binding domain-containing radical SAM protein
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF004160.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: protein motif:HMM:NF024122.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF014375.2
COORDINATES: protein motif:HMM:NF016158.2
COORDINATES: protein motif:HMM:TIGR01777.1
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF014910.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00158.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: protein motif:HMM:TIGR01104.1
COORDINATES: protein motif:HMM:NF013368.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016445698.1
COORDINATES: protein motif:HMM:NF012784.2
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00510.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001503.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00030.1
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: protein motif:HMM:NF041103.1
diphosphate--fructose-6-phosphate 1-phosphotransferase
COORDINATES: protein motif:HMM:TIGR01349.1
GO:0045254 - pyruvate dehydrogenase complex [Evidence IEA]
GO:0004742 - dihydrolipoyllysine-residue acetyltransferase activity [Evidence IEA]; GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
COORDINATES: protein motif:HMM:NF006667.0
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
pyruvate dehydrogenase complex E1 component subunit beta
COORDINATES: protein motif:HMM:TIGR03182.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: protein motif:HMM:NF002956.0
COORDINATES: protein motif:HMM:NF039677.1
COORDINATES: protein motif:HMM:TIGR00467.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
methylthioribulose 1-phosphate dehydratase
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002049.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:NF016432.2
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011996181.1
COORDINATES: protein motif:HMM:NF013126.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016071.2
COORDINATES: protein motif:HMM:NF008653.0
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:TIGR01420.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
type IV pilus twitching motility protein PilT
COORDINATES: protein motif:HMM:TIGR00200.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019428.2
COORDINATES: protein motif:HMM:NF024792.2
pilus assembly protein TadG-related protein
COORDINATES: protein motif:HMM:TIGR02012.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF015054.2
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:TIGR01307.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF007989.0
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF024701.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_002387688.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006873.0
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:TIGR00214.1
GO:0016979 - lipoate-protein ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016362.2
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019770973.1
COORDINATES: protein motif:HMM:NF004231.0
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000672.0
COORDINATES: protein motif:HMM:TIGR02639.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: protein motif:HMM:TIGR01970.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01026.1
GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF017952.2
COORDINATES: protein motif:HMM:NF013664.2
COORDINATES: protein motif:HMM:NF006515.0
bifunctional aspartate kinase/diaminopimelate decarboxylase
COORDINATES: protein motif:HMM:NF012933.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0140078 - class I DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012422.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF015679.2
COORDINATES: protein motif:HMM:TIGR00810.1
COORDINATES: protein motif:HMM:NF004225.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0017136 - NAD-dependent histone deacetylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006944.0
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006958.0
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF001808.0
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: protein motif:HMM:NF024484.2
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF006396.0
bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_002336979.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028441.2
outer membrane lipoprotein-sorting protein
bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_000229532.1
GO:0015103 - inorganic anion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012336.2
COORDINATES: protein motif:HMM:NF024779.2
putative DNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_263577173.1
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013798.2
GO:0046983 - protein dimerization activity [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
OAM dimerization domain-containing protein
COORDINATES: protein motif:HMM:NF013584.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF008909.0
GO:0004333 - fumarate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018604.2
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF022137.2
COORDINATES: protein motif:HMM:TIGR00667.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: protein motif:HMM:NF001159.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_003210966.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_263577167.1
COORDINATES: protein motif:HMM:TIGR00639.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_263577168.1
COORDINATES: similar to AA sequence:RefSeq:WP_263577177.1
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF020473.2
COORDINATES: protein motif:HMM:NF027528.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00768.1
COORDINATES: protein motif:HMM:NF016701.2
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004349.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024827.2
COORDINATES: protein motif:HMM:NF005600.0
COORDINATES: protein motif:HMM:NF006707.0
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013168.2
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:NF002111.0
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: protein motif:HMM:NF012385.2
COORDINATES: protein motif:HMM:NF017819.2
COORDINATES: protein motif:HMM:NF023428.2
replication-associated recombination protein A
GO:0016208 - AMP binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF040671.1
COORDINATES: protein motif:HMM:NF040673.1
COORDINATES: protein motif:HMM:NF040674.1
MrtP family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF041515.1
COORDINATES: protein motif:HMM:TIGR02517.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02533.1
COORDINATES: protein motif:HMM:TIGR02120.1
type II secretion system inner membrane protein GspF
COORDINATES: protein motif:HMM:NF019934.2
COORDINATES: protein motif:HMM:TIGR02532.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF023044.2
COORDINATES: protein motif:HMM:NF015867.2
COORDINATES: protein motif:HMM:NF022554.2
COORDINATES: protein motif:HMM:TIGR04411.1
COORDINATES: protein motif:HMM:NF012379.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018980.2
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: protein motif:HMM:NF013232.2
GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02515.1
GO:0009297 - pilus assembly [Evidence IEA]; GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: protein motif:HMM:NF016254.2
COORDINATES: protein motif:HMM:NF016253.2
GO:0043683 - type IV pilus assembly [Evidence IEA]; GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:TIGR01175.1
GO:0009297 - pilus assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF040455.1
COORDINATES: protein motif:HMM:TIGR01027.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005122.0
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
vitamin B12-dependent ribonucleotide reductase
COORDINATES: protein motif:HMM:NF017633.2
NFACT RNA binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR04226.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
zinc dependent phospholipase C family protein
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: protein motif:HMM:TIGR01701.1
COORDINATES: protein motif:HMM:NF001943.0
GO:0016783 - sulfurtransferase activity [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
GO:0005525 - GTP binding [Evidence IEA]; GO:0061603 - molybdenum cofactor guanylyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF024232.2
COORDINATES: protein motif:HMM:NF012239.2
COORDINATES: protein motif:HMM:NF003587.0
sulfate adenylyltransferase subunit CysD
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:NF023048.2
COORDINATES: protein motif:HMM:NF006053.0
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:TIGR01216.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01039.1
COORDINATES: protein motif:HMM:TIGR01146.1
COORDINATES: protein motif:HMM:NF009884.0
COORDINATES: protein motif:HMM:NF012439.2
COORDINATES: protein motif:HMM:NF012645.2
COORDINATES: protein motif:HMM:NF025124.2
COORDINATES: protein motif:HMM:TIGR03382.1
COORDINATES: protein motif:HMM:NF024991.2
COORDINATES: protein motif:HMM:NF025158.2
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: protein motif:HMM:NF019301.2
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: protein motif:HMM:NF013696.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01007.1
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:TIGR00757.1
GO:0004540 - RNA nuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039580.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290306.1
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF019494.2
polyhydroxyalkanoate synthesis regulator DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR04551.1
COORDINATES: protein motif:HMM:NF021246.2
poly(R)-hydroxyalkanoic acid synthase subunit PhaE
COORDINATES: protein motif:HMM:NF019285.2
nucleoside transporter C-terminal domain-containing protein
aminoglycoside phosphotransferase family protein
MTAP family purine nucleoside phosphorylase
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: protein motif:HMM:NF020932.2
COORDINATES: protein motif:HMM:NF018269.2
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290910.1
COORDINATES: protein motif:HMM:NF006757.0
GO:0003994 - aconitate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013214.2
COORDINATES: protein motif:HMM:TIGR00049.1
iron-sulfur cluster assembly accessory protein
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: protein motif:HMM:NF014626.2
GO:0008233 - peptidase activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
phosphocholine cytidylyltransferase family protein
COORDINATES: protein motif:HMM:NF022481.2
COORDINATES: protein motif:HMM:NF008965.0
COORDINATES: protein motif:HMM:NF016146.2
COORDINATES: protein motif:HMM:NF006960.0
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00092.1
COORDINATES: protein motif:HMM:NF024907.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:NF013227.2
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF023454.2
COORDINATES: protein motif:HMM:NF009438.0
type III secretion system export apparatus subunit SctR
COORDINATES: protein motif:HMM:TIGR01402.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF013478.2
COORDINATES: protein motif:HMM:NF013479.2
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:TIGR01509.1
COORDINATES: protein motif:HMM:NF017551.2
COORDINATES: protein motif:HMM:NF012705.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004659 - prenyltransferase activity [Evidence IEA]
phytoene/squalene synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010919829.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: protein motif:HMM:TIGR00945.1
COORDINATES: protein motif:HMM:NF017652.2
3-keto-5-aminohexanoate cleavage protein
COORDINATES: protein motif:HMM:NF012442.2
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00478.1
COORDINATES: protein motif:HMM:TIGR00661.1
COORDINATES: protein motif:HMM:TIGR00435.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:TIGR03216.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
2-hydroxymuconic semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:TIGR02098.1
COORDINATES: protein motif:HMM:NF008978.0
decaprenyl-phosphate phosphoribosyltransferase
COORDINATES: protein motif:HMM:NF025704.2
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016828.2
COORDINATES: similar to AA sequence:RefSeq:WP_002213087.1
histidine triad nucleotide-binding protein
COORDINATES: protein motif:HMM:TIGR00256.1
COORDINATES: protein motif:HMM:TIGR00688.1
putative metal-binding motif-containing protein
COORDINATES: protein motif:HMM:NF038402.1
COORDINATES: protein motif:HMM:NF018917.2
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
GO:0005829 - cytosol [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA]
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity [Evidence IEA]; GO:0008413 - 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity [Evidence IEA]; GO:0003986 - acetyl-CoA hydrolase activity [Evidence IEA]; GO:0010945 - CoA pyrophosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0015938 - coenzyme A catabolic process [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009132 - nucleoside diphosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: protein motif:HMM:NF003765.0
GO:0000175 - 3'-5'-RNA exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014453.2
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF008623.0
bifunctional nicotinamidase/pyrazinamidase
COORDINATES: protein motif:HMM:TIGR00482.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00233.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024675.2
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: protein motif:HMM:NF006421.0
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025702.2
COORDINATES: protein motif:HMM:NF012575.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: protein motif:HMM:NF023266.2
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0003997 - acyl-CoA oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
GO:0008784 - alanine racemase activity [Evidence IEA]
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00573.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: similar to AA sequence:RefSeq:WP_008813493.1
GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF027464.2
COORDINATES: protein motif:HMM:TIGR00232.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033503.1
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:NF001484.0
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF014027.2
GO:0008612 - peptidyl-lysine modification to peptidyl-hypusine [Evidence IEA]
COORDINATES: protein motif:HMM:NF013866.2
von Willebrand factor type A domain-containing protein
COORDINATES: protein motif:HMM:NF012981.2
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006754.0
GO:0031956 - medium-chain fatty acid-CoA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013722.2
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:TIGR03901.2
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: protein motif:HMM:NF013264.2
COORDINATES: protein motif:HMM:NF013132.2
GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - monoatomic anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: protein motif:HMM:NF016228.2
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013885.2
GO:0015293 - symporter activity [Evidence IEA]
bile acid:sodium symporter family protein
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF016627.2
GO:0003839 - gamma-glutamylcyclotransferase activity [Evidence IEA]
GO:0006751 - glutathione catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF013026.2
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: protein motif:HMM:NF012478.2
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:TIGR04039.1
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF008053.0
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003745.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_016290037.1
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013927.2
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF001208.0
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: protein motif:HMM:NF027637.2
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: protein motif:HMM:TIGR00217.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017022.2
ChuX/HutX family heme-like substrate-binding protein
COORDINATES: protein motif:HMM:NF013219.2
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF025430.2
GO:0015267 - channel activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016822.2
GO:0008791 - arginine N-succinyltransferase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025391.2
COORDINATES: protein motif:HMM:NF012349.2
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020904.2
COORDINATES: protein motif:HMM:TIGR00593.1
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: protein motif:HMM:NF012296.2
COORDINATES: protein motif:HMM:NF021466.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF016169.2
COORDINATES: protein motif:HMM:NF025068.2
COORDINATES: protein motif:HMM:NF013661.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan recognition family protein
COORDINATES: protein motif:HMM:NF013730.2
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01034.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015608.2
COORDINATES: protein motif:HMM:NF012340.2
COORDINATES: protein motif:HMM:NF000940.0
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046167 - glycerol-3-phosphate biosynthetic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF028169.2
COORDINATES: protein motif:HMM:NF006914.0
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: protein motif:HMM:NF022995.2
COORDINATES: protein motif:HMM:TIGR00211.2
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014896110.1
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01068.1
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF022427.2
COORDINATES: protein motif:HMM:NF026048.2
COORDINATES: protein motif:HMM:NF015922.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA gyrase C-terminal beta-propeller domain-containing protein
COORDINATES: protein motif:HMM:NF019421.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF013739.2
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF004314.0
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021945.2
COORDINATES: protein motif:HMM:TIGR00621.2
COORDINATES: protein motif:HMM:NF017559.2
COORDINATES: protein motif:HMM:TIGR02745.1
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cytochrome c oxidase accessory protein CcoG
cbb3-type cytochrome c oxidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF011053.0
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: protein motif:HMM:NF024778.2
COORDINATES: protein motif:HMM:NF013427.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015232.2
COORDINATES: protein motif:HMM:NF001591.0
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF004189.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011244903.1
COORDINATES: protein motif:HMM:TIGR00103.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: protein motif:HMM:TIGR03026.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF013624.2
COORDINATES: protein motif:HMM:NF013255.2
COORDINATES: protein motif:HMM:NF039905.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF019323.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024820.2
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:TIGR04564.1
Synerg-CTERM sorting domain-containing protein
class I SAM-dependent rRNA methyltransferase
COORDINATES: protein motif:HMM:NF013592.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03900.1
COORDINATES: protein motif:HMM:NF012700.2
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF021483.2
COORDINATES: protein motif:HMM:NF018813.2
COORDINATES: protein motif:HMM:TIGR01350.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013632.2
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017501.2
GO:1990107 - thiazole synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01683.1
amino acid ABC transporter substrate-binding protein
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019306798.1
GO:0000062 - fatty-acyl-CoA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:TIGR00464.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:TIGR00268.1
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:TIGR01510.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF038353.1
COORDINATES: protein motif:HMM:NF027592.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF017686.2
GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]
GO:0008218 - bioluminescence [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01430.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF019265.2
COORDINATES: protein motif:HMM:NF014896.2
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:TIGR01574.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_016292024.1
COORDINATES: protein motif:HMM:NF001810.0
COORDINATES: protein motif:HMM:NF014200.2
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: protein motif:HMM:NF004309.0
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: protein motif:HMM:NF025004.2
gluconate 2-dehydrogenase subunit 3 family protein
COORDINATES: protein motif:HMM:NF012935.2
COORDINATES: protein motif:HMM:NF024436.2
penicillin-binding protein activator LpoB
COORDINATES: protein motif:HMM:NF012308.2
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00473.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF013932.2
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF024211.2
heavy metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF018837.2
COORDINATES: protein motif:HMM:NF016906.2
COORDINATES: protein motif:HMM:NF003661.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: protein motif:HMM:TIGR03593.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012865047.1
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_312665.1
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:TIGR00089.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF016274.2
GO:0004668 - protein-arginine deiminase activity [Evidence IEA]
GO:0009446 - putrescine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00019.1
COORDINATES: similar to AA sequence:RefSeq:WP_017631298.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00690.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: protein motif:HMM:NF025638.2
COORDINATES: protein motif:HMM:NF012335.2
COORDINATES: protein motif:HMM:NF014573.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0008753 - NADPH dehydrogenase (quinone) activity [Evidence IEA]
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: protein motif:HMM:NF014999.2
COORDINATES: protein motif:HMM:NF025151.2
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:TIGR00238.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF001824.0
COORDINATES: protein motif:HMM:NF024890.2
COORDINATES: protein motif:HMM:NF004044.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:TIGR00126.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: similar to AA sequence:RefSeq:WP_016292161.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
biosynthetic peptidoglycan transglycosylase
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:TIGR01923.1
GO:0008756 - o-succinylbenzoate-CoA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013959.2
COORDINATES: protein motif:HMM:NF014305.2
alpha/beta hydrolase fold domain-containing protein
COORDINATES: protein motif:HMM:NF012493.2
COORDINATES: protein motif:HMM:NF022812.2
COORDINATES: protein motif:HMM:NF020962.2
type IV toxin-antitoxin system AbiEi family antitoxin
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: protein motif:HMM:NF014630.2
C4-type zinc ribbon domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF006871.0
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01051.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: protein motif:HMM:NF009763.0
GO:0000334 - 3-hydroxyanthranilate 3,4-dioxygenase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016658.2
COORDINATES: protein motif:HMM:NF004751.0
GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
1,4-dihydroxy-2-naphthoate polyprenyltransferase
COORDINATES: protein motif:HMM:TIGR00173.1
GO:0070204 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase activity [Evidence IEA]
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
COORDINATES: protein motif:HMM:TIGR00543.1
GO:0008909 - isochorismate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014659.2
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: protein motif:HMM:NF016032.2
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
glutamate-cysteine ligase family protein
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:NF017243.2
COORDINATES: protein motif:HMM:NF016811.2
COORDINATES: similar to AA sequence:RefSeq:WP_011239024.1
GO:0004803 - transposase activity [Evidence IEA]
GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]; GO:0043682 - P-type divalent copper transporter activity [Evidence IEA]
heavy metal-responsive transcriptional regulator
COORDINATES: protein motif:HMM:NF014465.2
mercuric transporter MerT family protein
COORDINATES: protein motif:HMM:TIGR02053.1
GO:0016152 - mercury (II) reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00003.1
GO:0005507 - copper ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003251.0
type II glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: protein motif:HMM:NF040319.1
COORDINATES: protein motif:HMM:NF025614.2
CPXCG motif-containing cysteine-rich protein
COORDINATES: protein motif:HMM:NF040165.1
COORDINATES: protein motif:HMM:TIGR03643.1
COORDINATES: protein motif:HMM:NF025028.2
COORDINATES: protein motif:HMM:NF013315.2
COORDINATES: protein motif:HMM:NF015770.2
COORDINATES: protein motif:HMM:NF018437.2
GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF039417.1
COORDINATES: protein motif:HMM:NF006959.0
GO:0004072 - aspartate kinase activity [Evidence IEA]; GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009067 - aspartate family amino acid biosynthetic process [Evidence IEA]
bifunctional aspartate kinase/homoserine dehydrogenase I
COORDINATES: protein motif:HMM:NF002288.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0006566 - threonine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014816.2
COORDINATES: protein motif:HMM:NF019313.2
COORDINATES: protein motif:HMM:NF015077.2
GO:0010038 - response to metal ion [Evidence IEA]
COORDINATES: protein motif:HMM:NF013491.2
PEP/pyruvate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016946.2
GO:0008488 - gamma-glutamyl carboxylase activity [Evidence IEA]
GO:0017187 - peptidyl-glutamic acid carboxylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021028.2
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF020588.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: protein motif:HMM:NF004384.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
aminopeptidase P N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: protein motif:HMM:NF020977.2
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: protein motif:HMM:TIGR00097.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF018880.2
COORDINATES: protein motif:HMM:NF011405.0
COORDINATES: protein motif:HMM:NF000823.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00663.1
COORDINATES: protein motif:HMM:NF006592.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021127.2
GO:0045227 - capsule polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002469.0
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01513.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01966.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003585.0
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0003957 - NAD(P)+ transhydrogenase (B-specific) activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:NF014307.2
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: protein motif:HMM:TIGR00561.1
GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: protein motif:HMM:NF019314.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025587.2
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: protein motif:HMM:NF016817.2
succinylglutamate desuccinylase/aspartoacylase family protein
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03709.1
COORDINATES: protein motif:HMM:NF025167.2
COORDINATES: protein motif:HMM:NF020136.2
COORDINATES: protein motif:HMM:NF014218.2
NCS1 family nucleobase:cation symporter-1
COORDINATES: protein motif:HMM:NF016300.2
COORDINATES: protein motif:HMM:NF037276.2
COORDINATES: protein motif:HMM:NF004490.0
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011897301.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF012389.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: protein motif:HMM:NF003921.0
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02289.1
COORDINATES: protein motif:HMM:TIGR00016.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024554.2
COORDINATES: protein motif:HMM:NF019122.2
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: protein motif:HMM:TIGR01173.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: protein motif:HMM:NF013239.2
COORDINATES: protein motif:HMM:NF014893.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: protein motif:HMM:NF017071.2
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013766.2
COORDINATES: protein motif:HMM:NF017889.2
GO:0007160 - cell-matrix adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00362.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR03723.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0120225 - coenzyme A binding [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0019136 - deoxynucleoside kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024628.2
COORDINATES: protein motif:HMM:NF012593.2
dicarboxylate/amino acid:cation symporter
COORDINATES: protein motif:HMM:TIGR02352.1
GO:0016647 - oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor [Evidence IEA]
L-erythro-3,5-diaminohexanoate dehydrogenase
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:NF021253.2
COORDINATES: protein motif:HMM:NF016876.2
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF012570.2
COORDINATES: protein motif:HMM:NF014398.2
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
ammonia-forming cytochrome c nitrite reductase subunit c552
COORDINATES: protein motif:HMM:TIGR03153.1
GO:0022900 - electron transport chain [Evidence IEA]
cytochrome c nitrite reductase small subunit
COORDINATES: protein motif:HMM:NF003555.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025742.2
COORDINATES: protein motif:HMM:NF016268.2
COORDINATES: protein motif:HMM:NF025873.2
COORDINATES: similar to AA sequence:RefSeq:WP_020801803.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015657.2
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_001954004.1
COORDINATES: protein motif:HMM:TIGR00614.1
GO:0043138 - 3'-5' DNA helicase activity [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019404.2
COORDINATES: protein motif:HMM:NF024694.2
DNA polymerase ligase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: protein motif:HMM:NF003792.0
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: protein motif:HMM:TIGR00078.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:TIGR04255.1
COORDINATES: protein motif:HMM:NF013331.2
COORDINATES: protein motif:HMM:NF041621.1
MXAN_5187 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012523.2
COORDINATES: protein motif:HMM:NF020076.2
COORDINATES: protein motif:HMM:NF021384.2
COORDINATES: protein motif:HMM:NF006617.0
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: protein motif:HMM:NF025100.2
beta-ketoacyl synthase chain length factor
COORDINATES: similar to AA sequence:RefSeq:WP_000091668.1
COORDINATES: protein motif:HMM:NF006587.0
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: protein motif:HMM:NF012447.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023089.2
COORDINATES: protein motif:HMM:NF016693.2
COORDINATES: protein motif:HMM:NF026121.2
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF024371.2
COORDINATES: protein motif:HMM:NF013844.2
COORDINATES: protein motif:HMM:NF020132.2
hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF013426.2
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: protein motif:HMM:NF013720.2
WD40 repeat domain-containing serine/threonine protein kinase
COORDINATES: protein motif:HMM:NF024603.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015057.2
COORDINATES: protein motif:HMM:NF023521.2
COORDINATES: similar to AA sequence:RefSeq:WP_002375372.1
COORDINATES: protein motif:HMM:NF033438.1
COORDINATES: protein motif:HMM:NF033443.1
COORDINATES: protein motif:HMM:NF012647.2
COORDINATES: protein motif:HMM:NF033455.1
BREX-6 system adenine-specific DNA-methyltransferase PglX
COORDINATES: protein motif:HMM:NF033441.0
COORDINATES: protein motif:HMM:NF020329.2
COORDINATES: protein motif:HMM:NF033448.0
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: protein motif:HMM:NF024976.2
type I restriction enzyme HsdR N-terminal domain-containing protein
leucine-rich repeat domain-containing protein
COORDINATES: protein motif:HMM:NF025803.2
RING finger family 4 domain-containing protein
COORDINATES: protein motif:HMM:NF033611.0
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:NF037510.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017007.2
COORDINATES: protein motif:HMM:NF015210.2
glutathione S-transferase family protein
COORDINATES: protein motif:HMM:TIGR04350.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04344.1
COORDINATES: protein motif:HMM:NF013460.2
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:NF023701.2
GSU2403 family nucleotidyltransferase fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_012204557.1
GO:0016987 - sigma factor activity [Evidence IEA]
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF024634.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012267.2
COORDINATES: protein motif:HMM:TIGR04107.1
heme anaerobic degradation radical SAM methyltransferase ChuW/HutW
COORDINATES: protein motif:HMM:TIGR04108.1
heme utilization cystosolic carrier protein HutX
COORDINATES: protein motif:HMM:NF013705.2
DnaJ C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF016103.2
COORDINATES: protein motif:HMM:NF013421.2
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF000801.0
GO:0016891 - RNA endonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014740.2
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:TIGR00532.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012424.2
COORDINATES: similar to AA sequence:RefSeq:WP_018003337.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040596.1
MXAN_2562 family outer membrane beta-barrel protein
COORDINATES: protein motif:HMM:NF006681.0
COORDINATES: protein motif:HMM:NF017538.2
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: protein motif:HMM:NF025468.2
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: protein motif:HMM:NF013887.2
COORDINATES: protein motif:HMM:NF015818.2
COORDINATES: protein motif:HMM:NF005298.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015272.2
GO:0020037 - heme binding [Evidence IEA]; GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
tryptophan 2,3-dioxygenase family protein
COORDINATES: protein motif:HMM:NF013328.2
GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
DNA-formamidopyrimidine glycosylase family protein
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:NF016985.2
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF016223.2
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:NF014206.2
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF014195.2
GO:0009427 - bacterial-type flagellum basal body, distal rod, L ring [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
flagellar basal body L-ring protein FlgH
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: protein motif:HMM:TIGR02488.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02490.1
COORDINATES: protein motif:HMM:NF005413.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF012662.2
COORDINATES: protein motif:HMM:TIGR01398.1
GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF013480.2
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: protein motif:HMM:TIGR02480.1
COORDINATES: protein motif:HMM:NF014235.2
FliM/FliN family flagellar motor switch protein
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: protein motif:HMM:NF020084.2
FIST N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF018852.2
COORDINATES: protein motif:HMM:TIGR00208.1
COORDINATES: protein motif:HMM:TIGR01396.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01395.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00205.1
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: protein motif:HMM:TIGR00207.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:NF025229.2
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: protein motif:HMM:NF027495.2
BtrH N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01814.1
GO:0030429 - kynureninase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015651.2
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004718.0
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:TIGR01722.1
GO:0102662 - malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity [Evidence IEA]
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF006183.0
GO:0017113 - dihydropyrimidine dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006210 - thymine catabolic process [Evidence IEA]; GO:0006212 - uracil catabolic process [Evidence IEA]
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
COORDINATES: protein motif:HMM:NF013670.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003384.0
GO:0016597 - amino acid binding [Evidence IEA]; GO:0043857 - N-acetylornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:NF003385.0
COORDINATES: protein motif:HMM:NF027116.2
COORDINATES: protein motif:HMM:NF025670.2
COORDINATES: protein motif:HMM:NF020795.2
COORDINATES: protein motif:HMM:TIGR03570.1
COORDINATES: similar to AA sequence:RefSeq:WP_001100785.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003984083.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: protein motif:HMM:NF013884.2
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
S-(hydroxymethyl)glutathione dehydrogenase
COORDINATES: protein motif:HMM:NF014409.2
acylneuraminate cytidylyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002349733.1
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03568.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0006047 - UDP-N-acetylglucosamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - DNA transposition [Evidence IEA]
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF033679.1
COORDINATES: protein motif:HMM:NF025585.2
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003820.0
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF011501.0
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_020886703.1
GO:0110001 - toxin-antitoxin complex [Evidence IEA]
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: protein motif:HMM:TIGR00557.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF013854.2
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0009146 - purine nucleoside triphosphate catabolic process [Evidence IEA]
non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF012905.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00838.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01850.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: protein motif:HMM:NF003387.0
COORDINATES: protein motif:HMM:NF006439.0
COORDINATES: protein motif:HMM:NF012936.2
asparagine synthase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF017239.2
COORDINATES: protein motif:HMM:NF024862.2
COORDINATES: protein motif:HMM:NF026257.2
COORDINATES: similar to AA sequence:RefSeq:WP_018003268.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_018003270.1
COORDINATES: similar to AA sequence:RefSeq:WP_012084982.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03953.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016293505.1
COORDINATES: similar to AA sequence:RefSeq:WP_004924105.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
COORDINATES: similar to AA sequence:RefSeq:WP_010896322.1
COORDINATES: similar to AA sequence:RefSeq:WP_009388013.1
COORDINATES: similar to AA sequence:RefSeq:WP_006784437.1
COORDINATES: similar to AA sequence:RefSeq:WP_004754241.1
COORDINATES: similar to AA sequence:RefSeq:WP_002514860.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: protein motif:HMM:TIGR01079.1
COORDINATES: similar to AA sequence:RefSeq:WP_003638072.1
COORDINATES: similar to AA sequence:RefSeq:WP_010750653.1
COORDINATES: protein motif:HMM:NF001109.0
COORDINATES: protein motif:HMM:TIGR03654.1
COORDINATES: similar to AA sequence:RefSeq:WP_006784446.1
COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1
COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1
COORDINATES: similar to AA sequence:RefSeq:WP_016911111.1
COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1
COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_000090796.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
COORDINATES: protein motif:HMM:NF003513.0
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_017042856.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: protein motif:HMM:TIGR03215.1
GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
acetaldehyde dehydrogenase (acetylating)
COORDINATES: protein motif:HMM:NF025114.2
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF025152.2
COORDINATES: protein motif:HMM:NF015406.2
cryptochrome/deoxyribodipyrimidine photo-lyase family protein
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: protein motif:HMM:NF017388.2
COORDINATES: protein motif:HMM:NF037081.2
COORDINATES: protein motif:HMM:NF024747.2
COORDINATES: protein motif:HMM:NF003916.0
GO:0016615 - malate dehydrogenase activity [Evidence IEA]
GO:0006108 - malate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016873.2
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006133.0
COORDINATES: protein motif:HMM:NF013500.2
COORDINATES: protein motif:HMM:NF026924.2
COORDINATES: protein motif:HMM:NF025569.2
COORDINATES: protein motif:HMM:NF027602.2
COORDINATES: protein motif:HMM:NF033546.1
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF028503.2
AbiEi antitoxin N-terminal domain-containing protein
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
MiaB/RimO family radical SAM methylthiotransferase
COORDINATES: protein motif:HMM:NF039309.1
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: protein motif:HMM:TIGR01891.1
COORDINATES: protein motif:HMM:NF014602.2
COORDINATES: protein motif:HMM:NF005557.0
COORDINATES: protein motif:HMM:NF016212.2
COORDINATES: protein motif:HMM:NF016242.2
COORDINATES: protein motif:HMM:NF008512.0
quaternary ammonium compound efflux SMR transporter SugE
dihydrolipoamide acetyltransferase family protein
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF003673.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:NF004283.0
COORDINATES: protein motif:HMM:NF013341.2
COORDINATES: protein motif:HMM:NF021606.2
COORDINATES: protein motif:HMM:NF024562.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF006763.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
zinc-regulated TonB-dependent outer membrane receptor
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF004939.0
COORDINATES: protein motif:HMM:NF015559.2
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF024842.2
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:TIGR01180.1
iron ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002290823.1
COORDINATES: protein motif:HMM:TIGR01224.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017922.2
COORDINATES: protein motif:HMM:NF012618.2
COORDINATES: protein motif:HMM:NF006829.0
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: protein motif:HMM:NF009538.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00526.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013236.2
COORDINATES: protein motif:HMM:NF024758.2
GO:0008233 - peptidase activity [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR00392.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013955.2
COORDINATES: protein motif:HMM:TIGR01512.1
COORDINATES: protein motif:HMM:NF013380.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
tRNA-dihydrouridine synthase family protein
COORDINATES: protein motif:HMM:NF001204.0
GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
symmetrical bis(5'-nucleosyl)-tetraphosphatase
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:NF024809.2
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF006720.0
COORDINATES: protein motif:HMM:NF024822.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290038.1
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF012428.2
COORDINATES: protein motif:HMM:NF006375.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014606.2
GO:0016020 - membrane [Evidence IEA]; GO:0042597 - periplasmic space [Evidence IEA]
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: protein motif:HMM:NF007024.0
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002076.0
COORDINATES: protein motif:HMM:NF033488.1
COORDINATES: protein motif:HMM:NF001211.0
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF009118.0
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF009166.1
COORDINATES: protein motif:HMM:TIGR02429.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207360.1
COORDINATES: protein motif:HMM:NF012975.2
GO:0003723 - RNA binding [Evidence IEA]; GO:0004540 - RNA nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019262.2
c-type cytochrome domain-containing protein
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021382.2
short-chain fatty acyl-CoA regulator family protein
COORDINATES: protein motif:HMM:NF013442.2
GO:0004474 - malate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF011645.0
GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008730.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015055.2
GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004668 - protein-arginine deiminase activity [Evidence IEA]
protein-arginine deiminase family protein
COORDINATES: protein motif:HMM:NF014600.2
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF025198.2
COORDINATES: protein motif:HMM:NF012471.2
COORDINATES: protein motif:HMM:NF020700.2
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04074.1
3' terminal RNA ribose 2'-O-methyltransferase Hen1
COORDINATES: protein motif:HMM:TIGR04075.1
GO:0004113 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity [Evidence IEA]; GO:0051731 - polynucleotide 5'-hydroxyl-kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020610.2
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013967.2
COORDINATES: protein motif:HMM:TIGR01137.1
GO:0004122 - cystathionine beta-synthase activity [Evidence IEA]
GO:0019344 - cysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013286.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_007921418.1
COORDINATES: protein motif:HMM:NF022591.2
COORDINATES: protein motif:HMM:NF013413.2
GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006054.0
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004064.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: protein motif:HMM:NF013319.2
GO:0008452 - RNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012470.2
COORDINATES: protein motif:HMM:NF037997.1
GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010434567.1
COORDINATES: protein motif:HMM:NF004326.0
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF004015.0
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:TIGR00132.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: protein motif:HMM:TIGR00135.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:TIGR00815.1
COORDINATES: protein motif:HMM:NF015438.2
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: protein motif:HMM:NF005057.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012203085.1
COORDINATES: protein motif:HMM:TIGR00014.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF001452.0
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:TIGR00018.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019958.2
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit beta/FixA family protein
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: protein motif:HMM:NF016356.2
COORDINATES: protein motif:HMM:TIGR00409.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF001273.0
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00186.1
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:NF025224.2
COORDINATES: similar to AA sequence:RefSeq:WP_003640798.1
COORDINATES: protein motif:HMM:NF012793.2
COORDINATES: protein motif:HMM:TIGR00922.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_016293571.1
COORDINATES: similar to AA sequence:RefSeq:WP_003225765.1
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002854784.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF006820.0
GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF024741.2
COORDINATES: protein motif:HMM:NF003573.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004363 - glutathione synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter-2 (CPA2) family protein
COORDINATES: protein motif:HMM:NF027474.2
COORDINATES: protein motif:HMM:NF022853.2
COORDINATES: protein motif:HMM:TIGR03346.1
COORDINATES: protein motif:HMM:NF019606.2
COORDINATES: protein motif:HMM:NF016489.2
COORDINATES: protein motif:HMM:NF013923.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF001136.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF007034.0
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014443.2
COORDINATES: protein motif:HMM:NF040138.1
LamG-like jellyroll fold domain-containing protein
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: protein motif:HMM:TIGR01845.1
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: protein motif:HMM:NF025605.2
COORDINATES: protein motif:HMM:NF041551.1
COORDINATES: protein motif:HMM:NF017015.2
COORDINATES: protein motif:HMM:NF018663.2
COORDINATES: protein motif:HMM:TIGR04141.1
TIGR04141 family sporadically distributed protein
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04113.1
type I-U CRISPR-associated protein Csx17
COORDINATES: protein motif:HMM:TIGR02570.1
type I-U CRISPR-associated RAMP protein Csb1/Cas7u
COORDINATES: protein motif:HMM:TIGR02165.1
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: protein motif:HMM:NF017355.2
toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:NF021356.2
GO:0004521 - RNA endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - DNA endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003715.0
COORDINATES: protein motif:HMM:NF020075.2
COORDINATES: protein motif:HMM:NF009381.0
COORDINATES: protein motif:HMM:NF012211.1
COORDINATES: similar to AA sequence:RefSeq:WP_011520372.1
COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:TIGR01131.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:TIGR01063.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF024748.2
COORDINATES: protein motif:HMM:TIGR01447.1
GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012952.2
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF014414.2
COORDINATES: protein motif:HMM:NF024861.2
COORDINATES: protein motif:HMM:NF006049.0
GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014684.2
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF002872.1
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012678.2
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014425.2
COORDINATES: protein motif:HMM:NF013742.2
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF020091.2
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
alpha-isopropylmalate synthase regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
(deoxy)nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF017932.2
GO:0008670 - 2,4-dienoyl-CoA reductase (NADPH) activity [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0033543 - fatty acid beta-oxidation, unsaturated, even number, reductase/isomerase pathway [Evidence IEA]
NADPH-dependent 2,4-dienoyl-CoA reductase
COORDINATES: protein motif:HMM:TIGR00426.1
COORDINATES: protein motif:HMM:TIGR01448.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:TIGR01790.1
COORDINATES: protein motif:HMM:TIGR00636.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: protein motif:HMM:NF021469.2
COORDINATES: protein motif:HMM:NF023462.2
COORDINATES: protein motif:HMM:NF003717.0
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02013.1
DNA-directed RNA polymerase subunit beta
COORDINATES: protein motif:HMM:TIGR02386.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: protein motif:HMM:TIGR02210.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: protein motif:HMM:TIGR00219.1
COORDINATES: similar to AA sequence:RefSeq:NP_462284.1
GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
SurA N-terminal domain-containing protein
GO:0008233 - peptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF037183.2
permease-like cell division protein FtsX
COORDINATES: protein motif:HMM:NF039824.1
COORDINATES: protein motif:HMM:NF025341.2
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: protein motif:HMM:NF024845.2
COORDINATES: protein motif:HMM:NF012534.2
COORDINATES: protein motif:HMM:TIGR01070.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
bifunctional metallophosphatase/5'-nucleotidase
COORDINATES: protein motif:HMM:TIGR00613.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014997.2
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023128.2
COORDINATES: protein motif:HMM:NF019605.2
COORDINATES: protein motif:HMM:NF036516.2
COORDINATES: protein motif:HMM:NF015853.2
cytochrome c-type biogenesis protein CcmH
COORDINATES: protein motif:HMM:NF039904.1
COORDINATES: protein motif:HMM:TIGR02037.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:TIGR01691.1
GO:0016862 - intramolecular oxidoreductase activity, interconverting keto- and enol-groups [Evidence IEA]; GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002023.0
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024376.2
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024423.2
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: protein motif:HMM:NF012485.2
pilus assembly protein N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015344.2
GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF027651.2
cytochrome c-type biogenesis CcmF C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015085.2
COORDINATES: protein motif:HMM:NF008954.0
COORDINATES: similar to AA sequence:RefSeq:WP_009598768.1
COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1
COORDINATES: similar to AA sequence:RefSeq:WP_017171142.1
COORDINATES: protein motif:HMM:NF017198.2
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]
COORDINATES: protein motif:HMM:NF025611.2
COORDINATES: protein motif:HMM:TIGR00813.1
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR02046.1
succinate dehydrogenase cytochrome b subunit
COORDINATES: protein motif:HMM:NF005749.0
fumarate reductase/succinate dehydrogenase flavoprotein subunit
COORDINATES: protein motif:HMM:NF005746.0
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF021631.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01240.1
GO:0004163 - diphosphomevalonate decarboxylase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: protein motif:HMM:NF012509.2
DNA starvation/stationary phase protection protein
COORDINATES: protein motif:HMM:NF015515.2
GO:0015297 - antiporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017016.2
GO:0000917 - division septum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013934.2
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03319.1
COORDINATES: protein motif:HMM:NF002852.0
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]
GO:0006562 - proline catabolic process [Evidence IEA]
L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:TIGR00396.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013408.2
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:NF040941.1
fibrinogen-like YCDxxxxGGGW domain-containing protein
COORDINATES: protein motif:HMM:NF015065.2
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_000290472.1
COORDINATES: protein motif:HMM:TIGR00689.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00244.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: protein motif:HMM:TIGR00187.1
COORDINATES: protein motif:HMM:TIGR00506.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: protein motif:HMM:NF000812.0
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013216.2
COORDINATES: protein motif:HMM:NF012413.2
GO:0004146 - dihydrofolate reductase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00959.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03302.1
GO:0065003 - protein-containing complex assembly [Evidence IEA]
outer membrane protein assembly factor BamD
COORDINATES: similar to AA sequence:RefSeq:WP_020063210.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293468.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292883.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
TRAP transporter substrate-binding protein DctP
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: similar to AA sequence:RefSeq:WP_005606730.1
COORDINATES: protein motif:HMM:NF000595.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014119.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024574.2
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF024805.2
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: protein motif:HMM:NF015418.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025181.2
COORDINATES: protein motif:HMM:NF017001.2
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF015298.2
RlpA-like double-psi beta-barrel domain-containing protein
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: protein motif:HMM:TIGR00281.1
COORDINATES: protein motif:HMM:TIGR02538.1
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01036.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006222 - UMP biosynthetic process [Evidence IEA]
quinone-dependent dihydroorotate dehydrogenase
COORDINATES: protein motif:HMM:NF016201.2
COORDINATES: protein motif:HMM:NF003711.0
COORDINATES: protein motif:HMM:NF019902.2
COORDINATES: protein motif:HMM:TIGR03081.1
COORDINATES: protein motif:HMM:NF018738.2
COORDINATES: protein motif:HMM:NF017855.2
COORDINATES: protein motif:HMM:NF016281.2
COORDINATES: protein motif:HMM:NF014703.2
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012571.2
COORDINATES: protein motif:HMM:NF008899.0
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019032.2
COORDINATES: protein motif:HMM:NF021539.2
COORDINATES: protein motif:HMM:NF024864.2
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:TIGR01263.1
GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006886.1
COORDINATES: protein motif:HMM:NF013715.2
COORDINATES: protein motif:HMM:NF003843.0
COORDINATES: protein motif:HMM:NF013488.2
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020250.2
COORDINATES: protein motif:HMM:TIGR00538.1
oxygen-independent coproporphyrinogen III oxidase
COORDINATES: protein motif:HMM:NF006762.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025008.2
COORDINATES: protein motif:HMM:NF015581.2
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: protein motif:HMM:NF012717.2
COORDINATES: similar to AA sequence:RefSeq:WP_001187988.1
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: protein motif:HMM:TIGR01962.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF012373.2
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: protein motif:HMM:NF013212.2
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]; GO:0051087 - protein-folding chaperone binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018613.2
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:NF010738.0
COORDINATES: protein motif:HMM:TIGR02349.1
COORDINATES: protein motif:HMM:TIGR01379.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF013589.2
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF006718.0
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:NF016973.2
COORDINATES: protein motif:HMM:NF014534.2
COORDINATES: protein motif:HMM:NF016064.2
YeeE/YedE thiosulfate transporter family protein
COORDINATES: protein motif:HMM:NF024958.2
COORDINATES: protein motif:HMM:NF009044.0
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF015953.2
COORDINATES: protein motif:HMM:NF037625.2
COORDINATES: protein motif:HMM:TIGR02814.1
PfaD family polyunsaturated fatty acid/polyketide biosynthesis protein
COORDINATES: protein motif:HMM:NF012901.2
COORDINATES: protein motif:HMM:NF020928.2
GO:0003729 - mRNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015047.2
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016819.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014795.2
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019227.2
polymorphic toxin-type HINT domain-containing protein
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:TIGR04052.1
metallo-mystery pair system four-Cys motif protein
COORDINATES: protein motif:HMM:NF021509.2
GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012675.2
COORDINATES: protein motif:HMM:NF021510.2
COORDINATES: protein motif:HMM:NF015947.2
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012876.2
COORDINATES: protein motif:HMM:NF028235.2
COORDINATES: protein motif:HMM:NF040011.1
COORDINATES: protein motif:HMM:NF024899.2
S1-like domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:NF036760.2
COORDINATES: protein motif:HMM:NF039470.1
COORDINATES: protein motif:HMM:NF024706.2
COORDINATES: protein motif:HMM:NF021352.2
COORDINATES: protein motif:HMM:NF025448.2
COORDINATES: protein motif:HMM:NF020442.2
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF024406.2
IS66 family transposase zinc-finger binding domain-containing protein
COORDINATES: protein motif:HMM:NF015038.2
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013087.2
GO:0008171 - O-methyltransferase activity [Evidence IEA]
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024180.2
COORDINATES: protein motif:HMM:NF024642.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021622.2
COORDINATES: protein motif:HMM:NF007277.0
5-methylcytosine-specific restriction endonuclease system specificity protein McrC
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019371.2
COORDINATES: protein motif:HMM:NF021429.2
COORDINATES: protein motif:HMM:NF013995.2
COORDINATES: protein motif:HMM:NF025024.2
COORDINATES: protein motif:HMM:NF023542.2
COORDINATES: similar to AA sequence:RefSeq:WP_000237816.1
COORDINATES: protein motif:HMM:NF014722.2
protein adenylyltransferase SelO family protein
COORDINATES: protein motif:HMM:NF012754.2
COORDINATES: protein motif:HMM:NF017984.2
winged helix DNA-binding domain-containing protein
medium chain dehydrogenase/reductase family protein
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: protein motif:HMM:NF014312.2
COORDINATES: protein motif:HMM:NF014110.2
COORDINATES: protein motif:HMM:NF024744.2
protein-tyrosine phosphatase family protein
COORDINATES: protein motif:HMM:NF015368.2
COORDINATES: protein motif:HMM:NF017672.2
GO:0006672 - ceramide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014066.2
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: protein motif:HMM:NF024515.2
COORDINATES: protein motif:HMM:NF003763.0
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02962.1
GO:0019628 - urate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03180.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
COORDINATES: protein motif:HMM:TIGR02961.1
GO:0004037 - allantoicase activity [Evidence IEA]
GO:0000256 - allantoin catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03178.1
GO:0004038 - allantoinase activity [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017945.2
COORDINATES: protein motif:HMM:NF041518.1
choice-of-anchor Q domain-containing protein
COORDINATES: protein motif:HMM:NF024760.2
PrsW family intramembrane metalloprotease
COORDINATES: protein motif:HMM:TIGR03904.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00181.1
COORDINATES: protein motif:HMM:NF017534.2
COORDINATES: protein motif:HMM:NF039641.1
GO:0000036 - acyl carrier activity [Evidence IEA]
procyclic acidic repetitive family protein
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012263.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
cytochrome b N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:NF012343.2
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:NF012344.2
COORDINATES: protein motif:HMM:NF017727.2
COORDINATES: protein motif:HMM:NF006879.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0043169 - cation binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024765.2
COORDINATES: protein motif:HMM:NF019352.2
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: protein motif:HMM:NF011649.1
COORDINATES: protein motif:HMM:NF003971.0
GO:0008851 - ethanolamine ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF011934.0
GO:0031469 - bacterial microcompartment [Evidence IEA]
ethanolamine utilization microcompartment protein EutL
COORDINATES: protein motif:HMM:NF001095.0
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012601.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015400.2
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: protein motif:HMM:NF036804.2
COORDINATES: protein motif:HMM:TIGR00189.1
GO:0006637 - acyl-CoA metabolic process [Evidence IEA]
acyl-CoA dehydrogenase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF026066.2
COORDINATES: protein motif:HMM:TIGR00742.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0002943 - tRNA dihydrouridine synthesis [Evidence IEA]
tRNA dihydrouridine(20/20a) synthase DusA
COORDINATES: protein motif:HMM:NF020976.2
COORDINATES: protein motif:HMM:NF007825.0
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013543.2
COORDINATES: protein motif:HMM:TIGR00153.1
COORDINATES: protein motif:HMM:TIGR00066.1
COORDINATES: protein motif:HMM:TIGR00657.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013322.2
COORDINATES: protein motif:HMM:NF019935.2
COORDINATES: protein motif:HMM:NF023273.2
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: protein motif:HMM:TIGR00033.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:NF002017.0
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: protein motif:HMM:NF041131.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: protein motif:HMM:NF014173.2
COORDINATES: protein motif:HMM:NF015951.2
YhjD/YihY/BrkB family envelope integrity protein
COORDINATES: protein motif:HMM:NF016231.2
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: protein motif:HMM:NF014805.2
COORDINATES: similar to AA sequence:RefSeq:WP_003021871.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
fibronectin type III domain-containing protein
COORDINATES: protein motif:HMM:NF015597.2
COORDINATES: protein motif:HMM:NF014522.2
COORDINATES: protein motif:HMM:TIGR00500.1
COORDINATES: protein motif:HMM:TIGR00633.1
COORDINATES: protein motif:HMM:NF017495.2
COORDINATES: protein motif:HMM:NF017266.2
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00433.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00508.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: protein motif:HMM:NF024891.2
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0015252 - proton channel activity [Evidence IEA]