Rhincodon typus isolate 14 chromosome 49, sRhiTyp1.1, whole genome shotgun sequence.
type: Entry
definition: Rhincodon typus isolate 14 chromosome 49, sRhiTyp1.1, whole genome shotgun sequence.
sequence version: NC_063380.1
sequence date: 2022-06-09
sequence: sequence
division: CON
label: NC_063380.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA842712
dblink: SAMN19519256
keyword: WGS
keyword: RefSeq
source: Rhincodon typus (whale shark)
organism: Rhincodon typus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038846.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 4160643
topology: linear
so has quality: SO_0000987
location: 1..4160643
location: region:1-4160643:1
RO_0002162: 259920

NC_063380
type: RefSeq
SIO_000068: refseq

PRJNA842712
type: BioProject
SIO_000068: bioproject

SAMN19519256
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4160643:1
position: 4160643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4160643:1:source
so part of: sequence
organism: Rhincodon typus
mol type: genomic DNA
isolate: 14
chromosome: 49
sex: male
tissue type: blood
dev stage: adult
collected by: 2018-05-24

259920
type: Taxonomy
SIO_000068: taxonomy

LOC125488106
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 392..11841
location: region:392-11841:1
so has part: feature:392-11841:1:exon
subclass of: SO_0000011

125488106
type: Gene
SIO_000068: ncbigene

position:392:1
position: 392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11841:1
position: 11841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392-11841:1:exon

LOC125488106
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125488106
product: uncharacterized LOC125488106
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007266217.1
SIO_010081: LOC125488106
subclass of: SO_0000673
so part of: LOC125488106
location: join(392..780,1791..1808,3826..3846,7746..7763,10403..10423,11824..11841)
location: region:392-11841:1
so has part: feature:392-780:1:exon
so has part: feature:1791-1808:1:exon
so has part: feature:3826-3846:1:exon
so has part: feature:7746-7763:1:exon
so has part: feature:10403-10423:1:exon
so has part: feature:11824-11841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392-780:1:exon

position:780:1
position: 780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1791-1808:1:exon

position:1791:1
position: 1791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1808:1
position: 1808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3826-3846:1:exon

position:3826:1
position: 3826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3846:1
position: 3846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7746-7763:1:exon

position:7746:1
position: 7746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7763:1
position: 7763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10403-10423:1:exon

position:10403:1
position: 10403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10423:1
position: 10423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11824-11841:1:exon

position:11824:1
position: 11824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926524
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926524
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13335..30873)
location: region:13335-30873:-1
so has part: feature:13335-30873:-1:exon
subclass of: SO_0000010

109926524
type: Gene
SIO_000068: ncbigene

position:13335:-1
position: 13335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30873:-1
position: 30873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13335-30873:-1:exon

LOC109926524
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926524
product: ubiquitin carboxyl-terminal hydrolase 5-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 long SRA reads, 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620973.1
SIO_010081: LOC109926524
subclass of: SO_0000673
so part of: LOC109926524
location: complement(join(13335..13429,14134..14287,15038..15315,16162..16354,17190..17435,18684..18837,19082..19201,21145..21238,21452..21523,21659..21852,22792..22886,23406..23590,23896..24041,24484..24617,25257..25323,26619..26744,30731..30873))
location: region:13335-30873:-1
so has part: feature:30731-30873:-1:exon
so has part: feature:26619-26744:-1:exon
so has part: feature:25257-25323:-1:exon
so has part: feature:24484-24617:-1:exon
so has part: feature:23896-24041:-1:exon
so has part: feature:23406-23590:-1:exon
so has part: feature:22792-22886:-1:exon
so has part: feature:21659-21852:-1:exon
so has part: feature:21452-21523:-1:exon
so has part: feature:21145-21238:-1:exon
so has part: feature:19082-19201:-1:exon
so has part: feature:18684-18837:-1:exon
so has part: feature:17190-17435:-1:exon
so has part: feature:16162-16354:-1:exon
so has part: feature:15038-15315:-1:exon
so has part: feature:14134-14287:-1:exon
so has part: feature:13335-13429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30731-30873:-1:exon

position:30731:-1
position: 30731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26619-26744:-1:exon

position:26619:-1
position: 26619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26744:-1
position: 26744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25257-25323:-1:exon

position:25257:-1
position: 25257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25323:-1
position: 25323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24484-24617:-1:exon

position:24484:-1
position: 24484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24617:-1
position: 24617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23896-24041:-1:exon

position:23896:-1
position: 23896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24041:-1
position: 24041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:23406-23590:-1:exon

position:23406:-1
position: 23406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23590:-1
position: 23590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22792-22886:-1:exon

position:22792:-1
position: 22792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22886:-1
position: 22886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:21659-21852:-1:exon

position:21659:-1
position: 21659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21852:-1
position: 21852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:21452-21523:-1:exon

position:21452:-1
position: 21452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21523:-1
position: 21523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:21145-21238:-1:exon

position:21145:-1
position: 21145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21238:-1
position: 21238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:19082-19201:-1:exon

position:19082:-1
position: 19082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19201:-1
position: 19201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:18684-18837:-1:exon

position:18684:-1
position: 18684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18837:-1
position: 18837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:17190-17435:-1:exon

position:17190:-1
position: 17190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17435:-1
position: 17435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:16162-16354:-1:exon

position:16162:-1
position: 16162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16354:-1
position: 16354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:15038-15315:-1:exon

position:15038:-1
position: 15038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15315:-1
position: 15315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:14134-14287:-1:exon

position:14134:-1
position: 14134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14287:-1
position: 14287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13335-13429:-1:exon

position:13429:-1
position: 13429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926524
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926524
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(17257..17259),aa:OTHER)
transl except: (pos:complement(17218..17220),aa:OTHER)
product: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 5-like
translation: MAEHGDLLLSVLSSIRVPRPGDRVHKDECAFSFDTPESDGGLYVCMNTFLGFGKQHVERHYQKTGQRVYLHLRRTRLPKVDDGSSGAGDPPKKKPTRLAIGVEGGFDVEGENFEYDEEVKVVILPEHATIPRESLSLMPAAACDRVTASVDGLLAADSASRKQEIQAWDGEVRQVSKHALNLKQMDNDVRIPPCGWKCTRCDLKENLWLNLTDGSILCGRRYFDGSGGNNHALEHYKQCGYPLAVKLGTITPDGADVYCYDEDEMVLDPNLAEHLSHFGIDMMKMQKTDKTMTELEIDMNQRIGEWETIQESSVHLKPLYGPEYTGLQNLGNSCYLNSVMQVVFSIPDFQTKYVANREKIFKDCPSDPTQDFNTQLAKLGYGLLSGEHSKGPPEQTTAAPTPRKLKEQDGIAPRMFKTLVGRGHPEFSTNRQQDAQEFFLHFINMVERNCRSSQNPNEAFRFLVEERINCLASGKVKYTQRVDYIMQLPVPIDVAVNKEELAEYEMKKREAEADKSVILEMVRAKIPFESCLQAYAEPEQVDDFWSTALLAKSVAVKXVMDPAPPTAPTWXYLGIPPPPHNVSIEMPDELDISALRGSGLQPGEEELPELAPPLVTPDETKGSLGLCGLDDDDSLCSAQFSSPTSPVLDESVVVQLVEMGFPVEACRKAVYYAANSGLEAALNWVMAHLEDPGKDPPTKEGGCVCTYGQVRRSTGSVSTLCWSGFGSHSPSHPVSSCNNSLERAVDWIFSRIDDLDTEVDMDVSEARSAPESLSESVPPGPKVRDGHGRYQLFAFISHMGTSTMCGHYVCHIKKEGR
SIO_010081: LOC109926524
subclass of: SO_0000673
so part of: LOC109926524
location: complement(join(13341..13429,14134..14287,15038..15315,16162..16354,17190..17435,18684..18837,19082..19201,21145..21238,21452..21523,21659..21852,22792..22886,23406..23590,23896..24041,24484..24617,25257..25323,26619..26744,30731..30838))
location: region:13341-30838:-1
so has part: feature:30731-30838:-1:exon
so has part: feature:26619-26744:-1:exon
so has part: feature:25257-25323:-1:exon
so has part: feature:24484-24617:-1:exon
so has part: feature:23896-24041:-1:exon
so has part: feature:23406-23590:-1:exon
so has part: feature:22792-22886:-1:exon
so has part: feature:21659-21852:-1:exon
so has part: feature:21452-21523:-1:exon
so has part: feature:21145-21238:-1:exon
so has part: feature:19082-19201:-1:exon
so has part: feature:18684-18837:-1:exon
so has part: feature:17190-17435:-1:exon
so has part: feature:16162-16354:-1:exon
so has part: feature:15038-15315:-1:exon
so has part: feature:14134-14287:-1:exon
so has part: feature:13341-13429:-1:exon

XP_048476930.1
type: Protein
SIO_000068: ncbiprotein

position:13341:-1
position: 13341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30838:-1
position: 30838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30731-30838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26619-26744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25257-25323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24484-24617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23896-24041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23406-23590:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22792-22886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21659-21852:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21452-21523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21145-21238:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:19082-19201:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18684-18837:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17190-17435:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:16162-16354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15038-15315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14134-14287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13341-13429:-1:exon

cdca3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cdca3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 34627..37373
location: region:34627-37373:1
so has part: feature:34627-37373:1:exon
subclass of: SO_0000010

125488108
type: Gene
SIO_000068: ncbigene

position:34627:1
position: 34627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37373:1
position: 37373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34627-37373:1:exon

cdca3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cdca3
product: cell division cycle associated 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620975.1
SIO_010081: cdca3
subclass of: SO_0000673
so part of: cdca3
location: join(34627..34778,34879..35062,35223..35543,35892..36013,36752..37373)
location: region:34627-37373:1
so has part: feature:34627-34778:1:exon
so has part: feature:34879-35062:1:exon
so has part: feature:35223-35543:1:exon
so has part: feature:35892-36013:1:exon
so has part: feature:36752-37373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34627-34778:1:exon

position:34778:1
position: 34778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34879-35062:1:exon

position:34879:1
position: 34879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35062:1
position: 35062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35223-35543:1:exon

position:35223:1
position: 35223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35543:1
position: 35543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35892-36013:1:exon

position:35892:1
position: 35892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36013:1
position: 36013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:36752-37373:1:exon

position:36752:1
position: 36752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cdca3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cdca3
product: cell division cycle associated 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620976.1
SIO_010081: cdca3
subclass of: SO_0000673
so part of: cdca3
location: join(34627..34778,34879..35062,35223..35543,35892..36013,36755..37373)
location: region:34627-37373:1
so has part: feature:34627-34778:1:exon
so has part: feature:34879-35062:1:exon
so has part: feature:35223-35543:1:exon
so has part: feature:35892-36013:1:exon
so has part: feature:36755-37373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34627-34778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34879-35062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35223-35543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35892-36013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36755-37373:1:exon

position:36755:1
position: 36755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cdca3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cdca3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle-associated protein 3 isoform X1
translation: MGTSGSTCAETPVRAPYNRHLSNALDPRSPSAGIVRTPIEVLSSPSPDRADAESEEEEEEELATATATSTATVGARGSSGPSDPRSPTPGVNRTPFKISVTAKLNHLVRQLSGVFVSEEAEGHLPAERGDGAGDDDKEEEEGASGTAVDQLLDCEEEGGDGSELPTSDQDDGETWPAPKEMAAATIPSGTGPARPGNRPLVWTDSLPRGPTAAKRNPAPGKLPAPGTIRSPLQPLAGGNSPGSALGLRQQIHKAAVSERIQDPEARSTMKAAPPDPAVCQDKENNYCLLTSRGRLCPP
SIO_010081: cdca3
subclass of: SO_0000673
so part of: cdca3
location: join(34659..34778,34879..35062,35223..35543,35892..36013,36752..36901)
location: region:34659-36901:1
so has part: feature:34659-34778:1:exon
so has part: feature:34879-35062:1:exon
so has part: feature:35223-35543:1:exon
so has part: feature:35892-36013:1:exon
so has part: feature:36752-36901:1:exon

XP_048476932.1
type: Protein
SIO_000068: ncbiprotein

position:34659:1
position: 34659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36901:1
position: 36901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34659-34778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34879-35062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35223-35543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35892-36013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36752-36901:1:exon

cdca3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cdca3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle-associated protein 3 isoform X2
translation: MGTSGSTCAETPVRAPYNRHLSNALDPRSPSAGIVRTPIEVLSSPSPDRADAESEEEEEEELATATATSTATVGARGSSGPSDPRSPTPGVNRTPFKISVTAKLNHLVRQLSGVFVSEEAEGHLPAERGDGAGDDDKEEEEGASGTAVDQLLDCEEEGGDGSELPTSDQDDGETWPAPKEMAAATIPSGTGPARPGNRPLVWTDSLPRGPTAAKRNPAPGKLPAPGTIRSPLQPLAGGNSPGSALGLRQIHKAAVSERIQDPEARSTMKAAPPDPAVCQDKENNYCLLTSRGRLCPP
SIO_010081: cdca3
subclass of: SO_0000673
so part of: cdca3
location: join(34659..34778,34879..35062,35223..35543,35892..36013,36755..36901)
location: region:34659-36901:1
so has part: feature:34659-34778:1:exon
so has part: feature:34879-35062:1:exon
so has part: feature:35223-35543:1:exon
so has part: feature:35892-36013:1:exon
so has part: feature:36755-36901:1:exon

XP_048476933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34659-34778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34879-35062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35223-35543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35892-36013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36755-36901:1:exon

LOC125488073
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 278456..279328
location: region:278456-279328:1
so has part: feature:278456-279328:1:exon
subclass of: SO_0000010

125488073
type: Gene
SIO_000068: ncbigene

position:278456:1
position: 278456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279328:1
position: 279328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278456-279328:1:exon

LOC125488073
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488073
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048620895.1
SIO_010081: LOC125488073
subclass of: SO_0000673
so part of: LOC125488073
location: 278456..279328
location: region:278456-279328:1
so has part: feature:278456-279328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278456-279328:1:exon

LOC125488073
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MSIVILSRGNCGLSRCISLYMLAMASADLLVMIINVIVYHIFSYNFLFSFLYHTSVCKLILYLTAVTLDLSTWFTIFFTFDRFAVICCRKFKTLYCNERTAAVVITFFPLLTLFKNIPFFFAYNHEKIINKVHWGCQPSGAFFSSSIGVVFFWFHIAWGVWLPFTLIALFNCLTIRRISLANGARRKLKSNVTENKYDAEIDNRRKSVTLLFTVSSSFLLLWLTAVISFVTTRIVNVNSYRGDRTNPGYIATEIGTMLKFLSSCPNTFIYAAAQKNFRKELKKVLRCLTF
SIO_010081: LOC125488073
subclass of: SO_0000673
so part of: LOC125488073
location: 278456..279328
location: region:278456-279328:1
so has part: feature:278456-279328:1:exon

XP_048476852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278456-279328:1:exon

LOC125488074
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488074
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(287170..311765)
location: region:287170-311765:-1
so has part: feature:287170-311765:-1:exon
subclass of: SO_0000010

125488074
type: Gene
SIO_000068: ncbigene

position:287170:-1
position: 287170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311765:-1
position: 311765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287170-311765:-1:exon

LOC125488074
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488074
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_048620896.1
SIO_010081: LOC125488074
subclass of: SO_0000673
so part of: LOC125488074
location: complement(join(287170..287759,295543..296445,311675..311765))
location: region:287170-311765:-1
so has part: feature:311675-311765:-1:exon
so has part: feature:295543-296445:-1:exon
so has part: feature:287170-287759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311675-311765:-1:exon

position:311675:-1
position: 311675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295543-296445:-1:exon

position:295543:-1
position: 295543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296445:-1
position: 296445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287170-287759:-1:exon

position:287759:-1
position: 287759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488074
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488074
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MGRNDSESRPVRRQKSAVTTGISHGGGGFLVNLVAIAILSRGKCGLSTCTTRYLVSMAAADLMVIVAEVVLRQFRYYYFPLCFLDITPACSVTYFLARAAADCSVWYTVTFTFDRFVLICCRNLKTKYCTRKTAGVVLATTGLLFLSKNIPFYCAYEPGTIIDKVPWYCHTKPSYYTDPAWLGFDWLDTVLTPLLPFTLILLLNALTVRYILMASRVRKGLKGHSKASNHKDTEMESRKKSAILLFTISGSFILLWLNRVIYFISSRITGTDPLNYNSSSYIFGEIGLMLRNLSCCTNTVIYGVTQAKFREQLKTAVKYPLTTIIQFVNEQRSISSTCDFTLPYRTLKAVITPKLPVPATKHRPLPPTKSSTLPRTSPTIYLAPLTIRSRSHHLLTPPTSSHSPTSTTLFPGTTSDATATAAHTADAAASVAKTQTATYSKDAAAAANIQENVNSPTPLRPPPTPALLTVPTATSCTANTSPRPFRVFTVPPDLLLAEHELSVLRKGLTFIPLYPNINEYCSRLYVE
SIO_010081: LOC125488074
subclass of: SO_0000673
so part of: LOC125488074
location: complement(join(287170..287759,295543..296445,311675..311765))
location: region:287170-311765:-1
so has part: feature:311675-311765:-1:exon
so has part: feature:295543-296445:-1:exon
so has part: feature:287170-287759:-1:exon

XP_048476853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311675-311765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295543-296445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287170-287759:-1:exon

LOC125488075
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(357632..358537)
location: region:357632-358537:-1
so has part: feature:357632-358537:-1:exon
subclass of: SO_0000010

125488075
type: Gene
SIO_000068: ncbigene

position:357632:-1
position: 357632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358537:-1
position: 358537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357632-358537:-1:exon

LOC125488075
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488075
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048620897.1
SIO_010081: LOC125488075
subclass of: SO_0000673
so part of: LOC125488075
location: complement(357632..358537)
location: region:357632-358537:-1
so has part: feature:357632-358537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357632-358537:-1:exon

LOC125488075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MLGIVILSCRNCGLSICTTYYLVAMAAADLLVIITEVMLRQISNYYFQWTFLDFTPVCSLIAVLVSTATDCSVWFTVSFSFDHFVAICCQQMKTKYCTMKTAIVVLSTTCILLCLKNIPFYFIYEPWLIVNNIPWFCSAKPIYYTDSGWVGFDWCDQVLNPLLPFTLILFINTLMARHILQASRVHKALRGQRKGENRSDPEMESRKKSVILLFTLSGSFILLWSVCVIEVIYYNMTGKDPGDYTVSEINFQQVGSMLQNLNCCTNTFIYVVTQSKFREQLSSVVKFPVTSIIQKMKKHKN
SIO_010081: LOC125488075
subclass of: SO_0000673
so part of: LOC125488075
location: complement(357632..358537)
location: region:357632-358537:-1
so has part: feature:357632-358537:-1:exon

XP_048476854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357632-358537:-1:exon

LOC125488110
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(371772..374725)
location: region:371772-374725:-1
so has part: feature:371772-374725:-1:exon
subclass of: SO_0000011

125488110
type: Gene
SIO_000068: ncbigene

position:371772:-1
position: 371772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374725:-1
position: 374725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371772-374725:-1:exon

LOC125488110
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125488110
product: uncharacterized LOC125488110
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007266218.1
SIO_010081: LOC125488110
subclass of: SO_0000673
so part of: LOC125488110
location: complement(join(371772..371919,372710..372834,374476..374725))
location: region:371772-374725:-1
so has part: feature:374476-374725:-1:exon
so has part: feature:372710-372834:-1:exon
so has part: feature:371772-371919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374476-374725:-1:exon

position:374476:-1
position: 374476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:372710-372834:-1:exon

position:372710:-1
position: 372710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372834:-1
position: 372834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:371772-371919:-1:exon

position:371919:-1
position: 371919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488076
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(396959..397876)
location: region:396959-397876:-1
so has part: feature:396959-397876:-1:exon
subclass of: SO_0000010

125488076
type: Gene
SIO_000068: ncbigene

position:396959:-1
position: 396959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397876:-1
position: 397876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396959-397876:-1:exon

LOC125488076
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488076
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048620898.1
SIO_010081: LOC125488076
subclass of: SO_0000673
so part of: LOC125488076
location: complement(396959..397876)
location: region:396959-397876:-1
so has part: feature:396959-397876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396959-397876:-1:exon

LOC125488076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MITVFILLRRNCGLSKCISAYMVAMATSDLLVIVNSIIIYNILSYHFPFSFLSHTPVCKLIVYMTAMSLDLTVWFTVSFTFDRFVVICCQRFKAKYCTKRTATMVLIVISVLILSKNILVLFAYEPEQIINNTQWGCRSSVNILTSSPAFAWFHSAWIAWLPFLLIFLFNSLTIHRIVVANRTRIGLRGHRSENHNNSAMESRRKSIILLFSISVSFILLWLTHSTSLVITRLSNPNYYRGDLNNPEYIITETGNILKLLSCFLNPCIYAVTQNKFREELNNVVKSLLKQIVRLVEKHKEKTNAF
SIO_010081: LOC125488076
subclass of: SO_0000673
so part of: LOC125488076
location: complement(396959..397876)
location: region:396959-397876:-1
so has part: feature:396959-397876:-1:exon

XP_048476855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396959-397876:-1:exon

LOC125488077
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 451061..473996
location: region:451061-473996:1
so has part: feature:451061-473996:1:exon

125488077
type: Gene
SIO_000068: ncbigene

position:451061:1
position: 451061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473996:1
position: 473996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451061-473996:1:exon

LOC125488077
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125488077
subclass of: SO_0000673
so part of: LOC125488077
location: 451061..451184
location: region:451061-451184:1
so has part: feature:451061-451184:1:exon

position:451184:1
position: 451184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451061-451184:1:exon

LOC125488077
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125488077
subclass of: SO_0000673
so part of: LOC125488077
location: 452096..452193
location: region:452096-452193:1
so has part: feature:452096-452193:1:exon

position:452096:1
position: 452096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452193:1
position: 452193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452096-452193:1:exon

LOC125488077
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125488077
subclass of: SO_0000673
so part of: LOC125488077
location: 469264..469309
location: region:469264-469309:1
so has part: feature:469264-469309:1:exon

position:469264:1
position: 469264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469309:1
position: 469309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469264-469309:1:exon

LOC125488077
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125488077
subclass of: SO_0000673
so part of: LOC125488077
location: 473088..473996
location: region:473088-473996:1
so has part: feature:473088-473996:1:exon

position:473088:1
position: 473088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473088-473996:1:exon

LOC109919539
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109919539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 951604..978137
location: region:951604-978137:1
so has part: feature:951604-978137:1:exon
subclass of: SO_0000010

109919539
type: Gene
SIO_000068: ncbigene

position:951604:1
position: 951604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978137:1
position: 978137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951604-978137:1:exon

LOC109919539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919539
product: prolyl 3-hydroxylase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048620935.1
SIO_010081: LOC109919539
subclass of: SO_0000673
so part of: LOC109919539
location: join(951604..952167,953145..953297,954151..954340,957536..957667,958243..958382,959166..959255,959961..960013,960250..960356,960986..961113,961351..961446,961561..961708,962071..962179,976673..976748,976924..977064,977877..978137)
location: region:951604-978137:1
so has part: feature:951604-952167:1:exon
so has part: feature:953145-953297:1:exon
so has part: feature:954151-954340:1:exon
so has part: feature:957536-957667:1:exon
so has part: feature:958243-958382:1:exon
so has part: feature:959166-959255:1:exon
so has part: feature:959961-960013:1:exon
so has part: feature:960250-960356:1:exon
so has part: feature:960986-961113:1:exon
so has part: feature:961351-961446:1:exon
so has part: feature:961561-961708:1:exon
so has part: feature:962071-962179:1:exon
so has part: feature:976673-976748:1:exon
so has part: feature:976924-977064:1:exon
so has part: feature:977877-978137:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:951604-952167:1:exon

position:952167:1
position: 952167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:953145-953297:1:exon

position:953145:1
position: 953145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953297:1
position: 953297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:954151-954340:1:exon

position:954151:1
position: 954151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954340:1
position: 954340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957536-957667:1:exon

position:957536:1
position: 957536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957667:1
position: 957667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958243-958382:1:exon

position:958243:1
position: 958243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958382:1
position: 958382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:959166-959255:1:exon

position:959166:1
position: 959166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959255:1
position: 959255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:959961-960013:1:exon

position:959961:1
position: 959961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960013:1
position: 960013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:960250-960356:1:exon

position:960250:1
position: 960250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960356:1
position: 960356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:960986-961113:1:exon

position:960986:1
position: 960986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961113:1
position: 961113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:961351-961446:1:exon

position:961351:1
position: 961351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961446:1
position: 961446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:961561-961708:1:exon

position:961561:1
position: 961561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961708:1
position: 961708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:962071-962179:1:exon

position:962071:1
position: 962071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962179:1
position: 962179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:976673-976748:1:exon

position:976673:1
position: 976673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976748:1
position: 976748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:976924-977064:1:exon

position:976924:1
position: 976924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977064:1
position: 977064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:977877-978137:1:exon

position:977877:1
position: 977877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109919539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolyl 3-hydroxylase 1-like
translation: MSLLPVLLLLVLLFGSGDHRTALPEPSLREPYNLLFSSGLQHYHQGDWEQAAGLLQRSLLSRSALRRLLAHCRRLCRERGSEVGEGFFARVLGTATCLDSCLRFPSTRPRVSGQVRDAFRSRAAYNYLQLSYYKLGELPKAAAAAQTFFEANPDHKEMRENIATYRKMEGVKPEHFQDLEAQPHWVAYDEGLRLYEEERFEDAIPQLEEVPREFLSALEECQAECEGPYDPEEYSYLTYQSHLYEAISDHNLQVLTCAQECVGELSNKPGHSESRTNFLPSVFYLLQEAYHKVGNYQKAVECIQTFLLFQPTDRSALHNRAFYQSRLPANQGTDIPPREEIKSYIEESLLQKEMLYLAMESLGHHFIDPDSWTPHELIPQSIQSNTRKENKSVHHPPKATERGPDRQRKSKMGQEDTLDKLRASALSLANLKLVMDGVRLRGTDRLVFDGALARQECATLRNVAHTVAALEEESPRDSSAGPRSANLEELSIQQALTLAHDSLLDPPAARLYYDASARVRRITQQLFDTLPLQPSISNLSCRGPVTGDQAAGEDAVSRDPCHWEPEGLRCWRESLPALTGDYRAFLYLNDEFEGGEFYFADRGGKRVSEEISPKCGRLVVFLSGQENAHSVRPVTEGQRCALTFSFTEKTQHEQEVNPSVDSLLELLYPASSTLGEPEQAPGPALHDRESPEQRERAHTQTRQARDGRQRQYKRPRPTAGAESPALRDEL
SIO_010081: LOC109919539
subclass of: SO_0000673
so part of: LOC109919539
location: join(951766..952167,953145..953297,954151..954340,957536..957667,958243..958382,959166..959255,959961..960013,960250..960356,960986..961113,961351..961446,961561..961708,962071..962179,976673..976748,976924..977064,977877..978104)
location: region:951766-978104:1
so has part: feature:951766-952167:1:exon
so has part: feature:953145-953297:1:exon
so has part: feature:954151-954340:1:exon
so has part: feature:957536-957667:1:exon
so has part: feature:958243-958382:1:exon
so has part: feature:959166-959255:1:exon
so has part: feature:959961-960013:1:exon
so has part: feature:960250-960356:1:exon
so has part: feature:960986-961113:1:exon
so has part: feature:961351-961446:1:exon
so has part: feature:961561-961708:1:exon
so has part: feature:962071-962179:1:exon
so has part: feature:976673-976748:1:exon
so has part: feature:976924-977064:1:exon
so has part: feature:977877-978104:1:exon

XP_048476892.1
type: Protein
SIO_000068: ncbiprotein

position:951766:1
position: 951766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978104:1
position: 978104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951766-952167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:953145-953297:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:954151-954340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957536-957667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958243-958382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959166-959255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:959961-960013:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960250-960356:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960986-961113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:961351-961446:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:961561-961708:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962071-962179:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:976673-976748:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:976924-977064:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:977877-978104:1:exon

LOC125488078
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1195274..1243733)
location: region:1195274-1243733:-1
so has part: feature:1195274-1243733:-1:exon

125488078
type: Gene
SIO_000068: ncbigene

position:1195274:-1
position: 1195274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243733:-1
position: 1243733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195274-1243733:-1:exon

LOC125488078
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488078
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC125488078
subclass of: SO_0000673
so part of: LOC125488078
location: complement(1195274..1196970)
location: region:1195274-1196970:-1
so has part: feature:1195274-1196970:-1:exon

position:1196970:-1
position: 1196970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195274-1196970:-1:exon

LOC125488078
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488078
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC125488078
subclass of: SO_0000673
so part of: LOC125488078
location: complement(1206664..1206839)
location: region:1206664-1206839:-1
so has part: feature:1206664-1206839:-1:exon

position:1206664:-1
position: 1206664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206839:-1
position: 1206839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206664-1206839:-1:exon

LOC125488078
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488078
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC125488078
subclass of: SO_0000673
so part of: LOC125488078
location: complement(1209369..1209506)
location: region:1209369-1209506:-1
so has part: feature:1209369-1209506:-1:exon

position:1209369:-1
position: 1209369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209506:-1
position: 1209506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209369-1209506:-1:exon

LOC125488078
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488078
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC125488078
subclass of: SO_0000673
so part of: LOC125488078
location: complement(1243488..1243733)
location: region:1243488-1243733:-1
so has part: feature:1243488-1243733:-1:exon

position:1243488:-1
position: 1243488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243488-1243733:-1:exon

LOC109933072
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109933072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1283582..1296389)
location: region:1283582-1296389:-1
so has part: feature:1283582-1296389:-1:exon
subclass of: SO_0000010

109933072
type: Gene
SIO_000068: ncbigene

position:1283582:-1
position: 1283582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296389:-1
position: 1296389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283582-1296389:-1:exon

LOC109933072
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109933072
product: MYC binding protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020532080.2
SIO_010081: LOC109933072
subclass of: SO_0000673
so part of: LOC109933072
location: complement(join(1283582..1284563,1288538..1288664,1291485..1291533,1293649..1293721,1296279..1296389))
location: region:1283582-1296389:-1
so has part: feature:1296279-1296389:-1:exon
so has part: feature:1293649-1293721:-1:exon
so has part: feature:1291485-1291533:-1:exon
so has part: feature:1288538-1288664:-1:exon
so has part: feature:1283582-1284563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1296279-1296389:-1:exon

position:1296279:-1
position: 1296279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1293649-1293721:-1:exon

position:1293649:-1
position: 1293649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293721:-1
position: 1293721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1291485-1291533:-1:exon

position:1291485:-1
position: 1291485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291533:-1
position: 1291533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1288538-1288664:-1:exon

position:1288538:-1
position: 1288538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288664:-1
position: 1288664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1283582-1284563:-1:exon

position:1284563:-1
position: 1284563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109933072
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109933072
product: MYC binding protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620939.1
SIO_010081: LOC109933072
subclass of: SO_0000673
so part of: LOC109933072
location: complement(join(1283582..1284563,1288538..1288664,1291485..1291546,1293649..1293721))
location: region:1283582-1293721:-1
so has part: feature:1293649-1293721:-1:exon
so has part: feature:1291485-1291546:-1:exon
so has part: feature:1288538-1288664:-1:exon
so has part: feature:1283582-1284563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1293649-1293721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291485-1291546:-1:exon

position:1291546:-1
position: 1291546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1288538-1288664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283582-1284563:-1:exon

LOC109933072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109933072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-Myc-binding protein isoform X1
translation: MARFGAADLQREQFRRYLEKGNVLDMLTKVLVILYEEPEKPNNVMDFLKQHLAIGPEPSDALALRLEMIELRQKYQLQLEENKELKAKLAQFELPKEAGQTE
SIO_010081: LOC109933072
subclass of: SO_0000673
so part of: LOC109933072
location: complement(join(1284519..1284563,1288538..1288664,1291485..1291533,1293649..1293721,1296279..1296293))
location: region:1284519-1296293:-1
so has part: feature:1296279-1296293:-1:exon
so has part: feature:1293649-1293721:-1:exon
so has part: feature:1291485-1291533:-1:exon
so has part: feature:1288538-1288664:-1:exon
so has part: feature:1284519-1284563:-1:exon

XP_020387669.1
type: Protein
SIO_000068: ncbiprotein

position:1284519:-1
position: 1284519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296293:-1
position: 1296293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296279-1296293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1293649-1293721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291485-1291533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288538-1288664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284519-1284563:-1:exon

LOC109933072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109933072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-Myc-binding protein isoform X2
translation: MCWICLQKFYFSVLVILYEEPEKPNNVMDFLKQHLAIGPEPSDALALRLEMIELRQKYQLQLEENKELKAKLAQFELPKEAGQTE
SIO_010081: LOC109933072
subclass of: SO_0000673
so part of: LOC109933072
location: complement(join(1284519..1284563,1288538..1288664,1291485..1291546,1293649..1293672))
location: region:1284519-1293672:-1
so has part: feature:1293649-1293672:-1:exon
so has part: feature:1291485-1291546:-1:exon
so has part: feature:1288538-1288664:-1:exon
so has part: feature:1284519-1284563:-1:exon

XP_048476896.1
type: Protein
SIO_000068: ncbiprotein

position:1293672:-1
position: 1293672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293649-1293672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291485-1291546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288538-1288664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284519-1284563:-1:exon

LOC109933073
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109933073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1316882..1350348)
location: region:1316882-1350348:-1
so has part: feature:1316882-1350348:-1:exon
subclass of: SO_0000010

109933073
type: Gene
SIO_000068: ncbigene

position:1316882:-1
position: 1316882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350348:-1
position: 1350348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1316882-1350348:-1:exon

LOC109933073
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109933073
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620932.1
SIO_010081: LOC109933073
subclass of: SO_0000673
so part of: LOC109933073
location: complement(join(1316882..1317662,1317831..1317998,1320460..1320630,1320800..1320970,1321182..1321268,1322938..1324675,1347577..1347802,1350181..1350348))
location: region:1316882-1350348:-1
so has part: feature:1350181-1350348:-1:exon
so has part: feature:1347577-1347802:-1:exon
so has part: feature:1322938-1324675:-1:exon
so has part: feature:1321182-1321268:-1:exon
so has part: feature:1320800-1320970:-1:exon
so has part: feature:1320460-1320630:-1:exon
so has part: feature:1317831-1317998:-1:exon
so has part: feature:1316882-1317662:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1350181-1350348:-1:exon

position:1350181:-1
position: 1350181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1347577-1347802:-1:exon

position:1347577:-1
position: 1347577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347802:-1
position: 1347802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1322938-1324675:-1:exon

position:1322938:-1
position: 1322938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324675:-1
position: 1324675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1321182-1321268:-1:exon

position:1321182:-1
position: 1321182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321268:-1
position: 1321268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1320800-1320970:-1:exon

position:1320800:-1
position: 1320800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320970:-1
position: 1320970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1320460-1320630:-1:exon

position:1320460:-1
position: 1320460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320630:-1
position: 1320630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1317831-1317998:-1:exon

position:1317831:-1
position: 1317831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1317998:-1
position: 1317998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1316882-1317662:-1:exon

position:1317662:-1
position: 1317662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109933073
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109933073
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620934.1
SIO_010081: LOC109933073
subclass of: SO_0000673
so part of: LOC109933073
location: complement(join(1316882..1317662,1317831..1317998,1320460..1320630,1320800..1320970,1321182..1321268,1322938..1324675,1350181..1350300))
location: region:1316882-1350300:-1
so has part: feature:1350181-1350300:-1:exon
so has part: feature:1322938-1324675:-1:exon
so has part: feature:1321182-1321268:-1:exon
so has part: feature:1320800-1320970:-1:exon
so has part: feature:1320460-1320630:-1:exon
so has part: feature:1317831-1317998:-1:exon
so has part: feature:1316882-1317662:-1:exon

position:1350300:-1
position: 1350300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350181-1350300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1322938-1324675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1321182-1321268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1320800-1320970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1320460-1320630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1317831-1317998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1316882-1317662:-1:exon

LOC109933073
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109933073
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620933.1
SIO_010081: LOC109933073
subclass of: SO_0000673
so part of: LOC109933073
location: complement(join(1316882..1317662,1317831..1317998,1320460..1320630,1320800..1320970,1321182..1321268,1322938..1324675,1340302..1340367,1340479..1340650,1347577..1347676))
location: region:1316882-1347676:-1
so has part: feature:1347577-1347676:-1:exon
so has part: feature:1340479-1340650:-1:exon
so has part: feature:1340302-1340367:-1:exon
so has part: feature:1322938-1324675:-1:exon
so has part: feature:1321182-1321268:-1:exon
so has part: feature:1320800-1320970:-1:exon
so has part: feature:1320460-1320630:-1:exon
so has part: feature:1317831-1317998:-1:exon
so has part: feature:1316882-1317662:-1:exon

position:1347676:-1
position: 1347676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1347577-1347676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340479-1340650:-1:exon

position:1340479:-1
position: 1340479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340650:-1
position: 1340650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1340302-1340367:-1:exon

position:1340302:-1
position: 1340302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340367:-1
position: 1340367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1322938-1324675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1321182-1321268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1320800-1320970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1320460-1320630:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1317831-1317998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1316882-1317662:-1:exon

LOC109933073
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109933073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like isoform X1
translation: MEDGVDGLSSLLTYKRIFNGQEHQTCVQMDSRTELIPKRQLAWSPKDLTGIGLGSRGFKRIKMGSQRIRPESQRIWCKRISLGSWRSPKDLLGSQRIREGAQQKHKEMLRVQTETLRVNTVQIKEKVKIFQLVDRYADLTVISTVRDRILVEHELLARGRDHEEWRQKCLWRGLEKIQTNQLFQSRFSQTNFSSGSTVAVSGVPGIGKTTMIQKIVYDWAIGKIYQQFQFVFYFKFRDLNTINCRINLKNLILDQYPYFGNILGNLWKKPESLLFIFDSLDEFKGRIDFSDDRRNTGPQFTCTDPECWCEVSDIVYSLIQHKLLPGCSVLVTTRPTELCLLEKAEITVWAEILGFADDDRREYFNKFFEDRTVAAAVYKHVKENEILYTMTYNPSYCWILCQSLGPFLSQSDRKEQRVPKTITQLYSYYIYNILKHHGRKIENPRDVILKLGEMAFKGVSEKNIVFRNGELIQYSLQPSQFLSGFLMELLERDDSVQTVVYTFPHLTIQEFVAALAQFLTPNPRDIQKLLSGAHSKADGRYEIFLRFVAGLSSPQAAWPLEEFLGPFLHQTTCQVIDWLKGIGEGQIRNTGSKTDKRDLLNRLQYLFESQNKALVRSIVGSMKTLAFSGLHLTPVDCFVVSHVIGLCDTVKLLDLENCYIQPEGLQRLGPVLYKCRELRLRNNDLQDQGMKLLSEALRNPDCQIEKLQLNDNSLSDSCAQDLASALGTNQSLMSLNLGENKLKDLGVKRLFVVLRNVNCKLQELVLLGNHLTHSCIEELACTLSTVQSLTVLNLGNNKLGDTGVKLLSVALSNPACKIVNLSLWGTSLSDSCTKDLASALSTNQSLTILKLGTNLFTDQSVPAISRLILDCKSLERIELWENQFTPTGKRHLESLQESRHRLKVIV
SIO_010081: LOC109933073
subclass of: SO_0000673
so part of: LOC109933073
location: complement(join(1317575..1317662,1317831..1317998,1320460..1320630,1320800..1320970,1321182..1321268,1322938..1324675,1347577..1347802,1350181..1350252))
location: region:1317575-1350252:-1
so has part: feature:1350181-1350252:-1:exon
so has part: feature:1347577-1347802:-1:exon
so has part: feature:1322938-1324675:-1:exon
so has part: feature:1321182-1321268:-1:exon
so has part: feature:1320800-1320970:-1:exon
so has part: feature:1320460-1320630:-1:exon
so has part: feature:1317831-1317998:-1:exon
so has part: feature:1317575-1317662:-1:exon

XP_048476889.1
type: Protein
SIO_000068: ncbiprotein

position:1317575:-1
position: 1317575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350252:-1
position: 1350252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350181-1350252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347577-1347802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1322938-1324675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1321182-1321268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1320800-1320970:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1320460-1320630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1317831-1317998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1317575-1317662:-1:exon

LOC109933073
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109933073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like isoform X2
translation: MEKGSRARRVMWESFVRMRHALPKLDKILKQVQELGSNPFDAMEHAQGLSKIPSHLKGAQQKHKEMLRVQTETLRVNTVQIKEKVKIFQLVDRYADLTVISTVRDRILVEHELLARGRDHEEWRQKCLWRGLEKIQTNQLFQSRFSQTNFSSGSTVAVSGVPGIGKTTMIQKIVYDWAIGKIYQQFQFVFYFKFRDLNTINCRINLKNLILDQYPYFGNILGNLWKKPESLLFIFDSLDEFKGRIDFSDDRRNTGPQFTCTDPECWCEVSDIVYSLIQHKLLPGCSVLVTTRPTELCLLEKAEITVWAEILGFADDDRREYFNKFFEDRTVAAAVYKHVKENEILYTMTYNPSYCWILCQSLGPFLSQSDRKEQRVPKTITQLYSYYIYNILKHHGRKIENPRDVILKLGEMAFKGVSEKNIVFRNGELIQYSLQPSQFLSGFLMELLERDDSVQTVVYTFPHLTIQEFVAALAQFLTPNPRDIQKLLSGAHSKADGRYEIFLRFVAGLSSPQAAWPLEEFLGPFLHQTTCQVIDWLKGIGEGQIRNTGSKTDKRDLLNRLQYLFESQNKALVRSIVGSMKTLAFSGLHLTPVDCFVVSHVIGLCDTVKLLDLENCYIQPEGLQRLGPVLYKCRELRLRNNDLQDQGMKLLSEALRNPDCQIEKLQLNDNSLSDSCAQDLASALGTNQSLMSLNLGENKLKDLGVKRLFVVLRNVNCKLQELVLLGNHLTHSCIEELACTLSTVQSLTVLNLGNNKLGDTGVKLLSVALSNPACKIVNLSLWGTSLSDSCTKDLASALSTNQSLTILKLGTNLFTDQSVPAISRLILDCKSLERIELWENQFTPTGKRHLESLQESRHRLKVIV
SIO_010081: LOC109933073
subclass of: SO_0000673
so part of: LOC109933073
location: complement(join(1317575..1317662,1317831..1317998,1320460..1320630,1320800..1320970,1321182..1321268,1322938..1324675,1340302..1340367,1340479..1340584))
location: region:1317575-1340584:-1
so has part: feature:1340479-1340584:-1:exon
so has part: feature:1340302-1340367:-1:exon
so has part: feature:1322938-1324675:-1:exon
so has part: feature:1321182-1321268:-1:exon
so has part: feature:1320800-1320970:-1:exon
so has part: feature:1320460-1320630:-1:exon
so has part: feature:1317831-1317998:-1:exon
so has part: feature:1317575-1317662:-1:exon

XP_048476890.1
type: Protein
SIO_000068: ncbiprotein

position:1340584:-1
position: 1340584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340479-1340584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340302-1340367:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1322938-1324675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1321182-1321268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1320800-1320970:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1320460-1320630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1317831-1317998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1317575-1317662:-1:exon

LOC109933073
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109933073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like isoform X3
translation: MLRVQTETLRVNTVQIKEKVKIFQLVDRYADLTVISTVRDRILVEHELLARGRDHEEWRQKCLWRGLEKIQTNQLFQSRFSQTNFSSGSTVAVSGVPGIGKTTMIQKIVYDWAIGKIYQQFQFVFYFKFRDLNTINCRINLKNLILDQYPYFGNILGNLWKKPESLLFIFDSLDEFKGRIDFSDDRRNTGPQFTCTDPECWCEVSDIVYSLIQHKLLPGCSVLVTTRPTELCLLEKAEITVWAEILGFADDDRREYFNKFFEDRTVAAAVYKHVKENEILYTMTYNPSYCWILCQSLGPFLSQSDRKEQRVPKTITQLYSYYIYNILKHHGRKIENPRDVILKLGEMAFKGVSEKNIVFRNGELIQYSLQPSQFLSGFLMELLERDDSVQTVVYTFPHLTIQEFVAALAQFLTPNPRDIQKLLSGAHSKADGRYEIFLRFVAGLSSPQAAWPLEEFLGPFLHQTTCQVIDWLKGIGEGQIRNTGSKTDKRDLLNRLQYLFESQNKALVRSIVGSMKTLAFSGLHLTPVDCFVVSHVIGLCDTVKLLDLENCYIQPEGLQRLGPVLYKCRELRLRNNDLQDQGMKLLSEALRNPDCQIEKLQLNDNSLSDSCAQDLASALGTNQSLMSLNLGENKLKDLGVKRLFVVLRNVNCKLQELVLLGNHLTHSCIEELACTLSTVQSLTVLNLGNNKLGDTGVKLLSVALSNPACKIVNLSLWGTSLSDSCTKDLASALSTNQSLTILKLGTNLFTDQSVPAISRLILDCKSLERIELWENQFTPTGKRHLESLQESRHRLKVIV
SIO_010081: LOC109933073
subclass of: SO_0000673
so part of: LOC109933073
location: complement(join(1317575..1317662,1317831..1317998,1320460..1320630,1320800..1320970,1321182..1321268,1322938..1324652))
location: region:1317575-1324652:-1
so has part: feature:1322938-1324652:-1:exon
so has part: feature:1321182-1321268:-1:exon
so has part: feature:1320800-1320970:-1:exon
so has part: feature:1320460-1320630:-1:exon
so has part: feature:1317831-1317998:-1:exon
so has part: feature:1317575-1317662:-1:exon

XP_048476891.1
type: Protein
SIO_000068: ncbiprotein

position:1324652:-1
position: 1324652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322938-1324652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1321182-1321268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1320800-1320970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1320460-1320630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1317831-1317998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1317575-1317662:-1:exon

LOC125488096
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1383498..1430385
location: region:1383498-1430385:1
so has part: feature:1383498-1430385:1:exon
subclass of: SO_0000010

125488096
type: Gene
SIO_000068: ncbigene

position:1383498:1
position: 1383498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430385:1
position: 1430385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383498-1430385:1:exon

LOC125488096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488096
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620936.1
SIO_010081: LOC125488096
subclass of: SO_0000673
so part of: LOC125488096
location: join(1383498..1385217,1388135..1388211,1393201..1393367,1399051..1399117,1426317..1426403,1427932..1428102,1428248..1428418,1428666..1428836,1428954..1429121,1429274..1430385)
location: region:1383498-1430385:1
so has part: feature:1383498-1385217:1:exon
so has part: feature:1388135-1388211:1:exon
so has part: feature:1393201-1393367:1:exon
so has part: feature:1399051-1399117:1:exon
so has part: feature:1426317-1426403:1:exon
so has part: feature:1427932-1428102:1:exon
so has part: feature:1428248-1428418:1:exon
so has part: feature:1428666-1428836:1:exon
so has part: feature:1428954-1429121:1:exon
so has part: feature:1429274-1430385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383498-1385217:1:exon

position:1385217:1
position: 1385217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1388135-1388211:1:exon

position:1388135:1
position: 1388135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388211:1
position: 1388211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1393201-1393367:1:exon

position:1393201:1
position: 1393201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393367:1
position: 1393367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1399051-1399117:1:exon

position:1399051:1
position: 1399051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399117:1
position: 1399117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1426317-1426403:1:exon

position:1426317:1
position: 1426317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426403:1
position: 1426403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1427932-1428102:1:exon

position:1427932:1
position: 1427932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428102:1
position: 1428102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1428248-1428418:1:exon

position:1428248:1
position: 1428248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428418:1
position: 1428418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1428666-1428836:1:exon

position:1428666:1
position: 1428666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428836:1
position: 1428836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1428954-1429121:1:exon

position:1428954:1
position: 1428954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429121:1
position: 1429121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1429274-1430385:1:exon

position:1429274:1
position: 1429274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125488096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488096
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620938.1
SIO_010081: LOC125488096
subclass of: SO_0000673
so part of: LOC125488096
location: join(1383498..1385217,1388135..1388211,1393283..1393367,1399051..1399117,1426317..1426403,1427932..1428102,1428248..1428418,1428666..1428836,1428954..1429121,1429274..1430385)
location: region:1383498-1430385:1
so has part: feature:1383498-1385217:1:exon
so has part: feature:1388135-1388211:1:exon
so has part: feature:1393283-1393367:1:exon
so has part: feature:1399051-1399117:1:exon
so has part: feature:1426317-1426403:1:exon
so has part: feature:1427932-1428102:1:exon
so has part: feature:1428248-1428418:1:exon
so has part: feature:1428666-1428836:1:exon
so has part: feature:1428954-1429121:1:exon
so has part: feature:1429274-1430385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383498-1385217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388135-1388211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1393283-1393367:1:exon

position:1393283:1
position: 1393283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1399051-1399117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1426317-1426403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427932-1428102:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1428248-1428418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1428666-1428836:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428954-1429121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1429274-1430385:1:exon

LOC125488096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488096
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620937.1
SIO_010081: LOC125488096
subclass of: SO_0000673
so part of: LOC125488096
location: join(1388230..1388333,1393201..1393367,1399051..1399117,1426317..1426403,1427932..1428102,1428248..1428418,1428666..1428836,1428954..1429121,1429274..1430385)
location: region:1388230-1430385:1
so has part: feature:1388230-1388333:1:exon
so has part: feature:1393201-1393367:1:exon
so has part: feature:1399051-1399117:1:exon
so has part: feature:1426317-1426403:1:exon
so has part: feature:1427932-1428102:1:exon
so has part: feature:1428248-1428418:1:exon
so has part: feature:1428666-1428836:1:exon
so has part: feature:1428954-1429121:1:exon
so has part: feature:1429274-1430385:1:exon

position:1388230:1
position: 1388230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1388230-1388333:1:exon

position:1388333:1
position: 1388333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1393201-1393367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1399051-1399117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426317-1426403:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427932-1428102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428248-1428418:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1428666-1428836:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1428954-1429121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1429274-1430385:1:exon

LOC125488096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like
translation: MKVLAEALREPNGKIHELWLDNNNLTDSCVIDLVSALCTNRSLTVLDLGNNKLRDSGVNLLSEALKNLECKIQKLWLDRLEITHSSARHLCSALSTNRSLRDLNLSNNELGNSGVNLLSTALRNPGCKIQKLVLDQIGFTASCARELALNLSSSQSLRVLKLNFNHLADSRMKLSSVALKNENCKMQTLELASVGLTDSCVNDFASAVSANQPLIGPNLSLNFFTDKSVPALHQLIKNYQSLKWIRLWCNRFSFNGEIQLRKLHKIRSNLSVEV
SIO_010081: LOC125488096
subclass of: SO_0000673
so part of: LOC125488096
location: join(1426348..1426403,1427932..1428102,1428248..1428418,1428666..1428836,1428954..1429121,1429274..1429361)
location: region:1426348-1429361:1
so has part: feature:1426348-1426403:1:exon
so has part: feature:1427932-1428102:1:exon
so has part: feature:1428248-1428418:1:exon
so has part: feature:1428666-1428836:1:exon
so has part: feature:1428954-1429121:1:exon
so has part: feature:1429274-1429361:1:exon

XP_048476893.1
type: Protein
SIO_000068: ncbiprotein

position:1426348:1
position: 1426348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429361:1
position: 1429361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1426348-1426403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427932-1428102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428248-1428418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428666-1428836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428954-1429121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1429274-1429361:1:exon

LOC125488096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like
translation: MKVLAEALREPNGKIHELWLDNNNLTDSCVIDLVSALCTNRSLTVLDLGNNKLRDSGVNLLSEALKNLECKIQKLWLDRLEITHSSARHLCSALSTNRSLRDLNLSNNELGNSGVNLLSTALRNPGCKIQKLVLDQIGFTASCARELALNLSSSQSLRVLKLNFNHLADSRMKLSSVALKNENCKMQTLELASVGLTDSCVNDFASAVSANQPLIGPNLSLNFFTDKSVPALHQLIKNYQSLKWIRLWCNRFSFNGEIQLRKLHKIRSNLSVEV
SIO_010081: LOC125488096
subclass of: SO_0000673
so part of: LOC125488096
location: join(1426348..1426403,1427932..1428102,1428248..1428418,1428666..1428836,1428954..1429121,1429274..1429361)
location: region:1426348-1429361:1
so has part: feature:1426348-1426403:1:exon
so has part: feature:1427932-1428102:1:exon
so has part: feature:1428248-1428418:1:exon
so has part: feature:1428666-1428836:1:exon
so has part: feature:1428954-1429121:1:exon
so has part: feature:1429274-1429361:1:exon

XP_048476894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1426348-1426403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427932-1428102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428248-1428418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428666-1428836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428954-1429121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1429274-1429361:1:exon

LOC125488096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like
translation: MKVLAEALREPNGKIHELWLDNNNLTDSCVIDLVSALCTNRSLTVLDLGNNKLRDSGVNLLSEALKNLECKIQKLWLDRLEITHSSARHLCSALSTNRSLRDLNLSNNELGNSGVNLLSTALRNPGCKIQKLVLDQIGFTASCARELALNLSSSQSLRVLKLNFNHLADSRMKLSSVALKNENCKMQTLELASVGLTDSCVNDFASAVSANQPLIGPNLSLNFFTDKSVPALHQLIKNYQSLKWIRLWCNRFSFNGEIQLRKLHKIRSNLSVEV
SIO_010081: LOC125488096
subclass of: SO_0000673
so part of: LOC125488096
location: join(1426348..1426403,1427932..1428102,1428248..1428418,1428666..1428836,1428954..1429121,1429274..1429361)
location: region:1426348-1429361:1
so has part: feature:1426348-1426403:1:exon
so has part: feature:1427932-1428102:1:exon
so has part: feature:1428248-1428418:1:exon
so has part: feature:1428666-1428836:1:exon
so has part: feature:1428954-1429121:1:exon
so has part: feature:1429274-1429361:1:exon

XP_048476895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1426348-1426403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427932-1428102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428248-1428418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428666-1428836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428954-1429121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1429274-1429361:1:exon

LOC125488097
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1531621..1534477)
location: region:1531621-1534477:-1
so has part: feature:1531621-1534477:-1:exon
subclass of: SO_0000010

125488097
type: Gene
SIO_000068: ncbigene

position:1531621:-1
position: 1531621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1534477:-1
position: 1534477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531621-1534477:-1:exon

LOC125488097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488097
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_048620940.1
SIO_010081: LOC125488097
subclass of: SO_0000673
so part of: LOC125488097
location: complement(join(1531621..1532528,1534408..1534477))
location: region:1531621-1534477:-1
so has part: feature:1534408-1534477:-1:exon
so has part: feature:1531621-1532528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1534408-1534477:-1:exon

position:1534408:-1
position: 1534408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1531621-1532528:-1:exon

position:1532528:-1
position: 1532528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MHGSPRSLVFALYYHILAAVGIPANLAVIVILSQRRCGLSTCIIYYLVSMAVTDLLVILTAVVLNRITGIYFPLSFLSITPICSLRSALIYASIDSSVWLTVVFTFDRFMAICCRKLKIKYCTEKTAARVIATVCLLSCLKNTFLYFIYEPLYIINDIPWFCSIKLMFYTSVMWAAFEWIHRIFTPCLPFILILLLNALTVRHILAANSARRRLRNQNSGLNQSDPEMESRRKSIILLFAISGSFILLYSLFLITFLYVRIASVSYFSGTNFVASNFILEESGFMLQLLSSCVNPFTYAGTQSKFRGEVKNLVKYPFSVLAKLIK
SIO_010081: LOC125488097
subclass of: SO_0000673
so part of: LOC125488097
location: complement(join(1531621..1532528,1534408..1534477))
location: region:1531621-1534477:-1
so has part: feature:1534408-1534477:-1:exon
so has part: feature:1531621-1532528:-1:exon

XP_048476897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1534408-1534477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1531621-1532528:-1:exon

LOC109923306
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923306
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1580854..1618879)
location: region:1580854-1618879:-1
so has part: feature:1580854-1618879:-1:exon
subclass of: SO_0000010

109923306
type: Gene
SIO_000068: ncbigene

position:1580854:-1
position: 1580854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618879:-1
position: 1618879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580854-1618879:-1:exon

LOC109923306
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923306
product: integrin alpha-M-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620899.1
SIO_010081: LOC109923306
subclass of: SO_0000673
so part of: LOC109923306
location: complement(join(1580854..1580952,1589474..1589578,1590347..1590460,1594116..1594205,1596055..1596162,1605460..1605532,1608646..1608729,1609023..1609102,1609459..1609566,1618742..1618879))
location: region:1580854-1618879:-1
so has part: feature:1618742-1618879:-1:exon
so has part: feature:1609459-1609566:-1:exon
so has part: feature:1609023-1609102:-1:exon
so has part: feature:1608646-1608729:-1:exon
so has part: feature:1605460-1605532:-1:exon
so has part: feature:1596055-1596162:-1:exon
so has part: feature:1594116-1594205:-1:exon
so has part: feature:1590347-1590460:-1:exon
so has part: feature:1589474-1589578:-1:exon
so has part: feature:1580854-1580952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1618742-1618879:-1:exon

position:1618742:-1
position: 1618742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1609459-1609566:-1:exon

position:1609459:-1
position: 1609459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609566:-1
position: 1609566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1609023-1609102:-1:exon

position:1609023:-1
position: 1609023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609102:-1
position: 1609102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1608646-1608729:-1:exon

position:1608646:-1
position: 1608646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608729:-1
position: 1608729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1605460-1605532:-1:exon

position:1605460:-1
position: 1605460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605532:-1
position: 1605532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1596055-1596162:-1:exon

position:1596055:-1
position: 1596055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596162:-1
position: 1596162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1594116-1594205:-1:exon

position:1594116:-1
position: 1594116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594205:-1
position: 1594205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1590347-1590460:-1:exon

position:1590347:-1
position: 1590347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590460:-1
position: 1590460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1589474-1589578:-1:exon

position:1589474:-1
position: 1589474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589578:-1
position: 1589578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1580854-1580952:-1:exon

position:1580952:-1
position: 1580952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109923306
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923306
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-M-like
translation: MVSLENAHEDSDKPQLHFYYPSCLNFRKISPVQPANVLVLCNDVDNSRRLNSGNLTCDVDHPIFPKHSRVTFSAEFDISDSETEERTANFTITATSGNSVRITNESTLSRTLFLRYTVNVVTSGIEYTRHINVTAGTQEVRLVKHSYQVENLGDRSLPIGLTLAVPDLLSGQPFWNVTVSSQNQMNHSVCPPPVKRDTWLERMSVQDRRDSVSEDCGIAPCILLRCHVSELQGHKRLIVDIQGELRTEAITQLNIKEPRLVTKLRLSYDEDKYVDVSNENSRSKEAVIKWKMARATAMAQVLGMGQACSMYNNRERTHT
SIO_010081: LOC109923306
subclass of: SO_0000673
so part of: LOC109923306
location: complement(join(1580854..1580952,1589474..1589578,1590347..1590460,1594116..1594205,1596055..1596162,1605460..1605532,1608646..1608729,1609023..1609102,1609459..1609566,1618742..1618840))
location: region:1580854-1618840:-1
so has part: feature:1618742-1618840:-1:exon
so has part: feature:1609459-1609566:-1:exon
so has part: feature:1609023-1609102:-1:exon
so has part: feature:1608646-1608729:-1:exon
so has part: feature:1605460-1605532:-1:exon
so has part: feature:1596055-1596162:-1:exon
so has part: feature:1594116-1594205:-1:exon
so has part: feature:1590347-1590460:-1:exon
so has part: feature:1589474-1589578:-1:exon
so has part: feature:1580854-1580952:-1:exon

XP_048476856.1
type: Protein
SIO_000068: ncbiprotein

position:1618840:-1
position: 1618840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1618742-1618840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1609459-1609566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1609023-1609102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1608646-1608729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1605460-1605532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596055-1596162:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594116-1594205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1590347-1590460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589474-1589578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1580854-1580952:-1:exon

LOC125488079
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1624684..1642645)
location: region:1624684-1642645:-1
so has part: feature:1624684-1642645:-1:exon
subclass of: SO_0000010

125488079
type: Gene
SIO_000068: ncbigene

position:1624684:-1
position: 1624684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642645:-1
position: 1642645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1624684-1642645:-1:exon

LOC125488079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488079
product: integrin alpha-X-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048620900.1
SIO_010081: LOC125488079
subclass of: SO_0000673
so part of: LOC125488079
location: complement(join(1624684..1624916,1627940..1628097,1629287..1629417,1630761..1630964,1632834..1632974,1633870..1634015,1634599..1634725,1639732..1639808,1640255..1640405,1640827..1640980,1642499..1642645))
location: region:1624684-1642645:-1
so has part: feature:1642499-1642645:-1:exon
so has part: feature:1640827-1640980:-1:exon
so has part: feature:1640255-1640405:-1:exon
so has part: feature:1639732-1639808:-1:exon
so has part: feature:1634599-1634725:-1:exon
so has part: feature:1633870-1634015:-1:exon
so has part: feature:1632834-1632974:-1:exon
so has part: feature:1630761-1630964:-1:exon
so has part: feature:1629287-1629417:-1:exon
so has part: feature:1627940-1628097:-1:exon
so has part: feature:1624684-1624916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1642499-1642645:-1:exon

position:1642499:-1
position: 1642499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1640827-1640980:-1:exon

position:1640827:-1
position: 1640827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1640980:-1
position: 1640980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1640255-1640405:-1:exon

position:1640255:-1
position: 1640255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1640405:-1
position: 1640405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1639732-1639808:-1:exon

position:1639732:-1
position: 1639732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1639808:-1
position: 1639808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1634599-1634725:-1:exon

position:1634599:-1
position: 1634599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634725:-1
position: 1634725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1633870-1634015:-1:exon

position:1633870:-1
position: 1633870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634015:-1
position: 1634015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1632834-1632974:-1:exon

position:1632834:-1
position: 1632834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1632974:-1
position: 1632974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1630761-1630964:-1:exon

position:1630761:-1
position: 1630761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1630964:-1
position: 1630964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1629287-1629417:-1:exon

position:1629287:-1
position: 1629287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629417:-1
position: 1629417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1627940-1628097:-1:exon

position:1627940:-1
position: 1627940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1628097:-1
position: 1628097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1624684-1624916:-1:exon

position:1624916:-1
position: 1624916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-X-like
translation: MQFSDLVKKEFNFEEYELSRRNETLVRRIRQIKGDTYTPTAIKQLVEEIFVEDSGLRTDSKRVMVVITDGKSNDPDTTFPKAIRLAEDKQILRFAVGVGPDFQSAEGRQELEIIASNSTNNTVFSIKNFNALKTIQDQLQAKIFAIEGAHGSENLTYFKNEMSQEGFSSILTSDTVVLGSPGAYRWSGGVLLYRGDNETFVNITIMDGDLRNSYLGYSVQKATRSGLDYYIVGAPRYRHTGAVVIFQRGSNGTWENRQRIPGEQIGSYFGSELCTMDVNGNGETDLLLIGAPLHQYQRFGGMVLVCTMSPQGNFSCGHSLRGAEESGLGRFGSSVAVLSDLNGDGLSDVAIGAPLEDEHRGRVYIFHGESGGIKLQYSQCLEGVKQSPSLTYFGQSVSGVMDVSGDLLTDLVIGSLGMVTVFRTRPIVNFSASAVFHPQPIPLALYRCHQVVEPGSLISNVTVCLRMASLAPGNLGELKANVTYNLFLDFGRQQGRATFLSFARKLTTNRLHSTKMTMCEQYTIHLSVRHVYLPSPESNTPLPSQNHYCQFH
SIO_010081: LOC125488079
subclass of: SO_0000673
so part of: LOC125488079
location: complement(join(1624684..1624916,1627940..1628097,1629287..1629417,1630761..1630964,1632834..1632974,1633870..1634015,1634599..1634725,1639732..1639808,1640255..1640405,1640827..1640980,1642499..1642635))
location: region:1624684-1642635:-1
so has part: feature:1642499-1642635:-1:exon
so has part: feature:1640827-1640980:-1:exon
so has part: feature:1640255-1640405:-1:exon
so has part: feature:1639732-1639808:-1:exon
so has part: feature:1634599-1634725:-1:exon
so has part: feature:1633870-1634015:-1:exon
so has part: feature:1632834-1632974:-1:exon
so has part: feature:1630761-1630964:-1:exon
so has part: feature:1629287-1629417:-1:exon
so has part: feature:1627940-1628097:-1:exon
so has part: feature:1624684-1624916:-1:exon

XP_048476857.1
type: Protein
SIO_000068: ncbiprotein

position:1642635:-1
position: 1642635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642499-1642635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640827-1640980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1640255-1640405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1639732-1639808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1634599-1634725:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1633870-1634015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1632834-1632974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1630761-1630964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1629287-1629417:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1627940-1628097:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1624684-1624916:-1:exon

LOC109922870
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109922870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1653528..1675170)
location: region:1653528-1675170:-1
so has part: feature:1653528-1675170:-1:exon
subclass of: SO_0000010

109922870
type: Gene
SIO_000068: ncbigene

position:1653528:-1
position: 1653528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1675170:-1
position: 1675170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1653528-1675170:-1:exon

LOC109922870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109922870
product: integrin alpha-X-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048620901.1
SIO_010081: LOC109922870
subclass of: SO_0000673
so part of: LOC109922870
location: complement(join(1653528..1653661,1655015..1655121,1662846..1662963,1673081..1673341,1674076..1675170))
location: region:1653528-1675170:-1
so has part: feature:1674076-1675170:-1:exon
so has part: feature:1673081-1673341:-1:exon
so has part: feature:1662846-1662963:-1:exon
so has part: feature:1655015-1655121:-1:exon
so has part: feature:1653528-1653661:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1674076-1675170:-1:exon

position:1674076:-1
position: 1674076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1673081-1673341:-1:exon

position:1673081:-1
position: 1673081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673341:-1
position: 1673341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1662846-1662963:-1:exon

position:1662846:-1
position: 1662846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1662963:-1
position: 1662963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1655015-1655121:-1:exon

position:1655015:-1
position: 1655015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655121:-1
position: 1655121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1653528-1653661:-1:exon

position:1653661:-1
position: 1653661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109922870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109922870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-X-like
translation: MADFLHSHAFNIETEAAQSFSGTKDSRFGQMVAQFQSSTETWIIVSAPLEVNETGTRTGRIYKCNYTRGQCRPLLVVAPPEAGDISLGLSLAPRTVGEPSLLVSIVSHTIPLLTVPSCGKV
SIO_010081: LOC109922870
subclass of: SO_0000673
so part of: LOC109922870
location: complement(join(1653528..1653661,1655015..1655121,1662846..1662963,1673081..1673087))
location: region:1653528-1673087:-1
so has part: feature:1673081-1673087:-1:exon
so has part: feature:1662846-1662963:-1:exon
so has part: feature:1655015-1655121:-1:exon
so has part: feature:1653528-1653661:-1:exon

XP_048476858.1
type: Protein
SIO_000068: ncbiprotein

position:1673087:-1
position: 1673087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673081-1673087:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1662846-1662963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1655015-1655121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653528-1653661:-1:exon

LOC109922871
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109922871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1674134..1678217
location: region:1674134-1678217:1
so has part: feature:1674134-1678217:1:exon
subclass of: SO_0000010

109922871
type: Gene
SIO_000068: ncbigene

position:1674134:1
position: 1674134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678217:1
position: 1678217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1674134-1678217:1:exon

LOC109922871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109922871
product: cardiotrophin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048620942.1
SIO_010081: LOC109922871
subclass of: SO_0000673
so part of: LOC109922871
location: join(1674134..1674469,1675112..1675207,1676719..1678217)
location: region:1674134-1678217:1
so has part: feature:1674134-1674469:1:exon
so has part: feature:1675112-1675207:1:exon
so has part: feature:1676719-1678217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1674134-1674469:1:exon

position:1674469:1
position: 1674469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1675112-1675207:1:exon

position:1675112:1
position: 1675112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675207:1
position: 1675207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1676719-1678217:1:exon

position:1676719:1
position: 1676719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109922871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109922871
product: cardiotrophin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048620941.1
SIO_010081: LOC109922871
subclass of: SO_0000673
so part of: LOC109922871
location: join(1675008..1675207,1676719..1678217)
location: region:1675008-1678217:1
so has part: feature:1675008-1675207:1:exon
so has part: feature:1676719-1678217:1:exon

position:1675008:1
position: 1675008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675008-1675207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676719-1678217:1:exon

LOC109922871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109922871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cardiotrophin-1-like isoform X1
translation: MLFLFWQMSNMDSVNETLERSYNLSVWLAHEASSLLELYIDMQGFRDGPPGIPDDHLQLPMPPTPDDEDWEPTRRLCQHRTACRLLATLLDHVLGEQRELNETRHHLHQQLQLAITGLQGLDANLGRVLSSLGSSEEEGDGQSQVLSGPSSDTAHWEAKVNGYHIIARYTHWVARTVEDLERLKDHLKPEA
SIO_010081: LOC109922871
subclass of: SO_0000673
so part of: LOC109922871
location: join(1675091..1675207,1676719..1677177)
location: region:1675091-1677177:1
so has part: feature:1675091-1675207:1:exon
so has part: feature:1676719-1677177:1:exon

XP_048476898.1
type: Protein
SIO_000068: ncbiprotein

position:1675091:1
position: 1675091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1677177:1
position: 1677177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675091-1675207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676719-1677177:1:exon

LOC109922871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109922871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cardiotrophin-1-like isoform X2
translation: MSNMDSVNETLERSYNLSVWLAHEASSLLELYIDMQGFRDGPPGIPDDHLQLPMPPTPDDEDWEPTRRLCQHRTACRLLATLLDHVLGEQRELNETRHHLHQQLQLAITGLQGLDANLGRVLSSLGSSEEEGDGQSQVLSGPSSDTAHWEAKVNGYHIIARYTHWVARTVEDLERLKDHLKPEA
SIO_010081: LOC109922871
subclass of: SO_0000673
so part of: LOC109922871
location: join(1675112..1675207,1676719..1677177)
location: region:1675112-1677177:1
so has part: feature:1675112-1675207:1:exon
so has part: feature:1676719-1677177:1:exon

XP_048476899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1675112-1675207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676719-1677177:1:exon

LOC125488098
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1749717..1770676)
location: region:1749717-1770676:-1
so has part: feature:1749717-1770676:-1:exon
subclass of: SO_0000011

125488098
type: Gene
SIO_000068: ncbigene

position:1749717:-1
position: 1749717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770676:-1
position: 1770676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1749717-1770676:-1:exon

LOC125488098
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125488098
product: uncharacterized LOC125488098
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007266211.1
SIO_010081: LOC125488098
subclass of: SO_0000673
so part of: LOC125488098
location: complement(join(1749717..1749956,1751639..1752681,1770511..1770676))
location: region:1749717-1770676:-1
so has part: feature:1770511-1770676:-1:exon
so has part: feature:1751639-1752681:-1:exon
so has part: feature:1749717-1749956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1770511-1770676:-1:exon

position:1770511:-1
position: 1770511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1751639-1752681:-1:exon

position:1751639:-1
position: 1751639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752681:-1
position: 1752681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1749717-1749956:-1:exon

position:1749956:-1
position: 1749956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109919992
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109919992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1786452..1809121)
location: region:1786452-1809121:-1
so has part: feature:1786452-1809121:-1:exon
subclass of: SO_0000010

109919992
type: Gene
SIO_000068: ncbigene

position:1786452:-1
position: 1786452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809121:-1
position: 1809121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1786452-1809121:-1:exon

LOC109919992
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919992
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620944.1
SIO_010081: LOC109919992
subclass of: SO_0000673
so part of: LOC109919992
location: complement(join(1786452..1789593,1789761..1789928,1790049..1790219,1795707..1795877,1796229..1796315,1800118..1801888,1803252..1803317,1803407..1803578,1804050..1804216,1807973..1808082,1808905..1809121))
location: region:1786452-1809121:-1
so has part: feature:1808905-1809121:-1:exon
so has part: feature:1807973-1808082:-1:exon
so has part: feature:1804050-1804216:-1:exon
so has part: feature:1803407-1803578:-1:exon
so has part: feature:1803252-1803317:-1:exon
so has part: feature:1800118-1801888:-1:exon
so has part: feature:1796229-1796315:-1:exon
so has part: feature:1795707-1795877:-1:exon
so has part: feature:1790049-1790219:-1:exon
so has part: feature:1789761-1789928:-1:exon
so has part: feature:1786452-1789593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1808905-1809121:-1:exon

position:1808905:-1
position: 1808905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1807973-1808082:-1:exon

position:1807973:-1
position: 1807973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808082:-1
position: 1808082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1804050-1804216:-1:exon

position:1804050:-1
position: 1804050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1804216:-1
position: 1804216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1803407-1803578:-1:exon

position:1803407:-1
position: 1803407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803578:-1
position: 1803578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1803252-1803317:-1:exon

position:1803252:-1
position: 1803252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803317:-1
position: 1803317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1800118-1801888:-1:exon

position:1800118:-1
position: 1800118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1801888:-1
position: 1801888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1796229-1796315:-1:exon

position:1796229:-1
position: 1796229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1796315:-1
position: 1796315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1795707-1795877:-1:exon

position:1795707:-1
position: 1795707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795877:-1
position: 1795877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1790049-1790219:-1:exon

position:1790049:-1
position: 1790049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1790219:-1
position: 1790219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1789761-1789928:-1:exon

position:1789761:-1
position: 1789761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789928:-1
position: 1789928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1786452-1789593:-1:exon

position:1789593:-1
position: 1789593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109919992
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919992
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620945.1
SIO_010081: LOC109919992
subclass of: SO_0000673
so part of: LOC109919992
location: complement(join(1786452..1789593,1789761..1789928,1790049..1790219,1795707..1795877,1796229..1796315,1800118..1801888,1803407..1803578,1804050..1804216,1807973..1809121))
location: region:1786452-1809121:-1
so has part: feature:1807973-1809121:-1:exon
so has part: feature:1804050-1804216:-1:exon
so has part: feature:1803407-1803578:-1:exon
so has part: feature:1800118-1801888:-1:exon
so has part: feature:1796229-1796315:-1:exon
so has part: feature:1795707-1795877:-1:exon
so has part: feature:1790049-1790219:-1:exon
so has part: feature:1789761-1789928:-1:exon
so has part: feature:1786452-1789593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1807973-1809121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1804050-1804216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803407-1803578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1800118-1801888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796229-1796315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1795707-1795877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1790049-1790219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789761-1789928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786452-1789593:-1:exon

LOC109919992
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919992
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620946.1
SIO_010081: LOC109919992
subclass of: SO_0000673
so part of: LOC109919992
location: complement(join(1786452..1789593,1790049..1790219,1795707..1795877,1796229..1796315,1800118..1801888,1803252..1803317,1803407..1803578,1804050..1804216,1807973..1808303))
location: region:1786452-1808303:-1
so has part: feature:1807973-1808303:-1:exon
so has part: feature:1804050-1804216:-1:exon
so has part: feature:1803407-1803578:-1:exon
so has part: feature:1803252-1803317:-1:exon
so has part: feature:1800118-1801888:-1:exon
so has part: feature:1796229-1796315:-1:exon
so has part: feature:1795707-1795877:-1:exon
so has part: feature:1790049-1790219:-1:exon
so has part: feature:1786452-1789593:-1:exon

position:1808303:-1
position: 1808303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1807973-1808303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1804050-1804216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803407-1803578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803252-1803317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1800118-1801888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796229-1796315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1795707-1795877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790049-1790219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786452-1789593:-1:exon

LOC109919992
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919992
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620943.1
SIO_010081: LOC109919992
subclass of: SO_0000673
so part of: LOC109919992
location: complement(join(1786452..1789593,1789761..1789928,1790049..1790219,1795707..1795877,1796229..1796315,1800118..1801888,1803252..1803317,1803407..1803578,1804050..1804216,1807973..1808303))
location: region:1786452-1808303:-1
so has part: feature:1807973-1808303:-1:exon
so has part: feature:1804050-1804216:-1:exon
so has part: feature:1803407-1803578:-1:exon
so has part: feature:1803252-1803317:-1:exon
so has part: feature:1800118-1801888:-1:exon
so has part: feature:1796229-1796315:-1:exon
so has part: feature:1795707-1795877:-1:exon
so has part: feature:1790049-1790219:-1:exon
so has part: feature:1789761-1789928:-1:exon
so has part: feature:1786452-1789593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1807973-1808303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1804050-1804216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803407-1803578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803252-1803317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1800118-1801888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796229-1796315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1795707-1795877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790049-1790219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789761-1789928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1786452-1789593:-1:exon

LOC109919992
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like isoform X2
translation: MADSSYRGEDPATSTRMLMDTDPNLTTTKLLTTCDDYWLFQLTKFYSIRLAEAIEEMLEGLSLTLADEANFTGQEYDKVIELVEKGNRADSSKLLLNLVMEKGSQAQRVMWQSLVKLRHGVPKLDEILKEMEHLDVQQKHKKILRVQTEALRVNTVLVKEKIFPLADRYTELTVISTAQDQKLEYEHELLARGRDHEKWREKHFQKELQKIQIDQLFRSGFCKRHGSLWKIKRFFRHSKSGSSVAVGGVPGIGKTTMVQKIVFDWAIGKIYPQFQFVFSFKFRYLNTIQCRINLRNLILDQYPYFGNVLGKLWKNPEGLLFIFDGLDEFKDSIDFSDNRRNRDPRSMCTDPECWCEVSDIVCSLIQHKLLPGCSVLVTSRPATLHLLEKAEISVSAEILGFLADERKEYFNKFFEDQTVAAAVYKHVNENDILYTMSYNPSFCWILCLSLGPFFTYGDWKQQQVPKTITQLYSYYIYNILKHHSREIENPHDVLLKLGELAFTGVSEKKIVFRNGDLIQYNLQPSQFLSGFMMEVLERDDSVQSVVYTFPHLTIQEFMAALAQFLIPDPMDIQKLLNEVQRKRDGRFELFLHFITGLTSPQAAQPLEEFLGPFPHQTTCRVIDWLTEVTKREIWDAWYEPGEGSIVSCLHYLFESQSKAVAQATVGSVQTFAFSDLKLTQIDCAILSHVIGFCDTLKQLDLFACFIQCEGLQRLVSVLHKCQDLRLTLNNLQDSGVKLLCAALRNPDCKIQELKLGINDLTASCAEDLAAALVANQSLTLLDLGHNGLGDVGVKLLSVALKNPDCKIQSLRLDKNGLTDSCTEELSSALITNESLIDLSLGNNNLQDSGVKLLSVALSNPDCGIKKLNLEMNGITDSCIEDLSSALSTNQSLTLLTLNSNSLTDRSVPTLQCLVQACRNLELIQLKNNLFSPIGRGQLETLQGSRLCVTV
SIO_010081: LOC109919992
subclass of: SO_0000673
so part of: LOC109919992
location: complement(join(1789512..1789593,1789761..1789928,1790049..1790219,1795707..1795877,1796229..1796315,1800118..1801888,1803407..1803578,1804050..1804216,1807973..1808036))
location: region:1789512-1808036:-1
so has part: feature:1807973-1808036:-1:exon
so has part: feature:1804050-1804216:-1:exon
so has part: feature:1803407-1803578:-1:exon
so has part: feature:1800118-1801888:-1:exon
so has part: feature:1796229-1796315:-1:exon
so has part: feature:1795707-1795877:-1:exon
so has part: feature:1790049-1790219:-1:exon
so has part: feature:1789761-1789928:-1:exon
so has part: feature:1789512-1789593:-1:exon

XP_048476902.1
type: Protein
SIO_000068: ncbiprotein

position:1789512:-1
position: 1789512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808036:-1
position: 1808036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1807973-1808036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1804050-1804216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803407-1803578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1800118-1801888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796229-1796315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1795707-1795877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1790049-1790219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789761-1789928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789512-1789593:-1:exon

LOC109919992
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like isoform X3
translation: MADSSYRGEDPATSTRMLMDTDPNLTTTKLLTTCDDYWLFQLTKFYSIRLAEAIEEMLEGLSLTLADEANFTGQEYDKVIELVEKGNRADSSKLLLNLVMEKGSQAQRVMWQSLVKLRHGVPKLDEILKEMEHLGSDPFNCVNVGRYSSKVAIHLKDVQQKHKKILRVQTEALRVNTVLVKEKIFPLADRYTELTVISTAQDQKLEYEHELLARGRDHEKWREKHFQKELQKIQIDQLFRSGFCKRHGSLWKIKRFFRHSKSGSSVAVGGVPGIGKTTMVQKIVFDWAIGKIYPQFQFVFSFKFRYLNTIQCRINLRNLILDQYPYFGNVLGKLWKNPEGLLFIFDGLDEFKDSIDFSDNRRNRDPRSMCTDPECWCEVSDIVCSLIQHKLLPGCSVLVTSRPATLHLLEKAEISVSAEILGFLADERKEYFNKFFEDQTVAAAVYKHVNENDILYTMSYNPSFCWILCLSLGPFFTYGDWKQQQVPKTITQLYSYYIYNILKHHSREIENPHDVLLKLGELAFTGVSEKKIVFRNGDLIQYNLQPSQFLSGFMMEVLERDDSVQSVVYTFPHLTIQEFMAALAQFLIPDPMDIQKLLNEVQRKRDGRFELFLHFITGLTSPQAAQPLEEFLGPFPHQTTCRVIDWLTEVTKREIWDAWYEPGEGSIVSCLHYLFESQSKAVAQATVGSVQTFAFSDLKLTQIDCAILSHVIGFCDTLKQLDLFACFIQCEGLQRLVSVLHKCQDLRLTLNNLQDSGVKLLCAALRNPDCKIQELKLGINDLTASCAEDLAAALVANQSLTLLDLGHNGLGDVGVKLLSVALKNPDCKIQSLRLDKNGLTDSCTEELSSALITNESLIDLSLGNNNLQDSGVKLLSVALSNPDCGIKKLKLKNNLFSPIGRGQLETLQGSRLCVTV
SIO_010081: LOC109919992
subclass of: SO_0000673
so part of: LOC109919992
location: complement(join(1789512..1789593,1790049..1790219,1795707..1795877,1796229..1796315,1800118..1801888,1803252..1803317,1803407..1803578,1804050..1804216,1807973..1808036))
location: region:1789512-1808036:-1
so has part: feature:1807973-1808036:-1:exon
so has part: feature:1804050-1804216:-1:exon
so has part: feature:1803407-1803578:-1:exon
so has part: feature:1803252-1803317:-1:exon
so has part: feature:1800118-1801888:-1:exon
so has part: feature:1796229-1796315:-1:exon
so has part: feature:1795707-1795877:-1:exon
so has part: feature:1790049-1790219:-1:exon
so has part: feature:1789512-1789593:-1:exon

XP_048476903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1807973-1808036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1804050-1804216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803407-1803578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803252-1803317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1800118-1801888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796229-1796315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1795707-1795877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790049-1790219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789512-1789593:-1:exon

LOC109919992
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like isoform X1
translation: MADSSYRGEDPATSTRMLMDTDPNLTTTKLLTTCDDYWLFQLTKFYSIRLAEAIEEMLEGLSLTLADEANFTGQEYDKVIELVEKGNRADSSKLLLNLVMEKGSQAQRVMWQSLVKLRHGVPKLDEILKEMEHLGSDPFNCVNVGRYSSKVAIHLKDVQQKHKKILRVQTEALRVNTVLVKEKIFPLADRYTELTVISTAQDQKLEYEHELLARGRDHEKWREKHFQKELQKIQIDQLFRSGFCKRHGSLWKIKRFFRHSKSGSSVAVGGVPGIGKTTMVQKIVFDWAIGKIYPQFQFVFSFKFRYLNTIQCRINLRNLILDQYPYFGNVLGKLWKNPEGLLFIFDGLDEFKDSIDFSDNRRNRDPRSMCTDPECWCEVSDIVCSLIQHKLLPGCSVLVTSRPATLHLLEKAEISVSAEILGFLADERKEYFNKFFEDQTVAAAVYKHVNENDILYTMSYNPSFCWILCLSLGPFFTYGDWKQQQVPKTITQLYSYYIYNILKHHSREIENPHDVLLKLGELAFTGVSEKKIVFRNGDLIQYNLQPSQFLSGFMMEVLERDDSVQSVVYTFPHLTIQEFMAALAQFLIPDPMDIQKLLNEVQRKRDGRFELFLHFITGLTSPQAAQPLEEFLGPFPHQTTCRVIDWLTEVTKREIWDAWYEPGEGSIVSCLHYLFESQSKAVAQATVGSVQTFAFSDLKLTQIDCAILSHVIGFCDTLKQLDLFACFIQCEGLQRLVSVLHKCQDLRLTLNNLQDSGVKLLCAALRNPDCKIQELKLGINDLTASCAEDLAAALVANQSLTLLDLGHNGLGDVGVKLLSVALKNPDCKIQSLRLDKNGLTDSCTEELSSALITNESLIDLSLGNNNLQDSGVKLLSVALSNPDCGIKKLNLEMNGITDSCIEDLSSALSTNQSLTLLTLNSNSLTDRSVPTLQCLVQACRNLELIQLKNNLFSPIGRGQLETLQGSRLCVTV
SIO_010081: LOC109919992
subclass of: SO_0000673
so part of: LOC109919992
location: complement(join(1789512..1789593,1789761..1789928,1790049..1790219,1795707..1795877,1796229..1796315,1800118..1801888,1803252..1803317,1803407..1803578,1804050..1804216,1807973..1808036))
location: region:1789512-1808036:-1
so has part: feature:1807973-1808036:-1:exon
so has part: feature:1804050-1804216:-1:exon
so has part: feature:1803407-1803578:-1:exon
so has part: feature:1803252-1803317:-1:exon
so has part: feature:1800118-1801888:-1:exon
so has part: feature:1796229-1796315:-1:exon
so has part: feature:1795707-1795877:-1:exon
so has part: feature:1790049-1790219:-1:exon
so has part: feature:1789761-1789928:-1:exon
so has part: feature:1789512-1789593:-1:exon

XP_048476900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1807973-1808036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1804050-1804216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803407-1803578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803252-1803317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1800118-1801888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796229-1796315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1795707-1795877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790049-1790219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789761-1789928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1789512-1789593:-1:exon

LOC109919992
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like isoform X1
translation: MADSSYRGEDPATSTRMLMDTDPNLTTTKLLTTCDDYWLFQLTKFYSIRLAEAIEEMLEGLSLTLADEANFTGQEYDKVIELVEKGNRADSSKLLLNLVMEKGSQAQRVMWQSLVKLRHGVPKLDEILKEMEHLGSDPFNCVNVGRYSSKVAIHLKDVQQKHKKILRVQTEALRVNTVLVKEKIFPLADRYTELTVISTAQDQKLEYEHELLARGRDHEKWREKHFQKELQKIQIDQLFRSGFCKRHGSLWKIKRFFRHSKSGSSVAVGGVPGIGKTTMVQKIVFDWAIGKIYPQFQFVFSFKFRYLNTIQCRINLRNLILDQYPYFGNVLGKLWKNPEGLLFIFDGLDEFKDSIDFSDNRRNRDPRSMCTDPECWCEVSDIVCSLIQHKLLPGCSVLVTSRPATLHLLEKAEISVSAEILGFLADERKEYFNKFFEDQTVAAAVYKHVNENDILYTMSYNPSFCWILCLSLGPFFTYGDWKQQQVPKTITQLYSYYIYNILKHHSREIENPHDVLLKLGELAFTGVSEKKIVFRNGDLIQYNLQPSQFLSGFMMEVLERDDSVQSVVYTFPHLTIQEFMAALAQFLIPDPMDIQKLLNEVQRKRDGRFELFLHFITGLTSPQAAQPLEEFLGPFPHQTTCRVIDWLTEVTKREIWDAWYEPGEGSIVSCLHYLFESQSKAVAQATVGSVQTFAFSDLKLTQIDCAILSHVIGFCDTLKQLDLFACFIQCEGLQRLVSVLHKCQDLRLTLNNLQDSGVKLLCAALRNPDCKIQELKLGINDLTASCAEDLAAALVANQSLTLLDLGHNGLGDVGVKLLSVALKNPDCKIQSLRLDKNGLTDSCTEELSSALITNESLIDLSLGNNNLQDSGVKLLSVALSNPDCGIKKLNLEMNGITDSCIEDLSSALSTNQSLTLLTLNSNSLTDRSVPTLQCLVQACRNLELIQLKNNLFSPIGRGQLETLQGSRLCVTV
SIO_010081: LOC109919992
subclass of: SO_0000673
so part of: LOC109919992
location: complement(join(1789512..1789593,1789761..1789928,1790049..1790219,1795707..1795877,1796229..1796315,1800118..1801888,1803252..1803317,1803407..1803578,1804050..1804216,1807973..1808036))
location: region:1789512-1808036:-1
so has part: feature:1807973-1808036:-1:exon
so has part: feature:1804050-1804216:-1:exon
so has part: feature:1803407-1803578:-1:exon
so has part: feature:1803252-1803317:-1:exon
so has part: feature:1800118-1801888:-1:exon
so has part: feature:1796229-1796315:-1:exon
so has part: feature:1795707-1795877:-1:exon
so has part: feature:1790049-1790219:-1:exon
so has part: feature:1789761-1789928:-1:exon
so has part: feature:1789512-1789593:-1:exon

XP_048476901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1807973-1808036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1804050-1804216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803407-1803578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803252-1803317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1800118-1801888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796229-1796315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1795707-1795877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790049-1790219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789761-1789928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1789512-1789593:-1:exon

LOC125488100
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1809419..1835277
location: region:1809419-1835277:1
so has part: feature:1809419-1835277:1:exon
subclass of: SO_0000011

125488100
type: Gene
SIO_000068: ncbigene

position:1809419:1
position: 1809419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1835277:1
position: 1835277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1809419-1835277:1:exon

LOC125488100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125488100
product: uncharacterized LOC125488100
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007266212.1
SIO_010081: LOC125488100
subclass of: SO_0000673
so part of: LOC125488100
location: join(1809419..1809745,1812804..1813082,1834059..1835277)
location: region:1809419-1835277:1
so has part: feature:1809419-1809745:1:exon
so has part: feature:1812804-1813082:1:exon
so has part: feature:1834059-1835277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809419-1809745:1:exon

position:1809745:1
position: 1809745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1812804-1813082:1:exon

position:1812804:1
position: 1812804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1813082:1
position: 1813082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1834059-1835277:1:exon

position:1834059:1
position: 1834059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109937690
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109937690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1950589..1978051)
location: region:1950589-1978051:-1
so has part: feature:1950589-1978051:-1:exon
subclass of: SO_0000010

109937690
type: Gene
SIO_000068: ncbigene

position:1950589:-1
position: 1950589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978051:-1
position: 1978051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1950589-1978051:-1:exon

LOC109937690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937690
product: nuclear factor of activated T cells 2 interacting protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620949.1
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1950589..1954195,1963662..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1976717..1976887))
location: region:1950589-1976887:-1
so has part: feature:1976717-1976887:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963662-1963848:-1:exon
so has part: feature:1950589-1954195:-1:exon

position:1976887:-1
position: 1976887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1976717-1976887:-1:exon

position:1976717:-1
position: 1976717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

position:1975902:-1
position: 1975902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1976036:-1
position: 1976036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

position:1975057:-1
position: 1975057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975135:-1
position: 1975135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

position:1974491:-1
position: 1974491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974626:-1
position: 1974626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

position:1973752:-1
position: 1973752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973841:-1
position: 1973841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

position:1973310:-1
position: 1973310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973493:-1
position: 1973493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

position:1972724:-1
position: 1972724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972868:-1
position: 1972868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

position:1971432:-1
position: 1971432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971535:-1
position: 1971535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1963662-1963848:-1:exon

position:1963662:-1
position: 1963662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963848:-1
position: 1963848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1950589-1954195:-1:exon

position:1954195:-1
position: 1954195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109937690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937690
product: nuclear factor of activated T cells 2 interacting protein, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620953.1
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963411..1963848,1971432..1971535,1972724..1972790,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1977937..1978051))
location: region:1963411-1978051:-1
so has part: feature:1977937-1978051:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972790:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963411-1963848:-1:exon

position:1963411:-1
position: 1963411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977937-1978051:-1:exon

position:1977937:-1
position: 1977937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972790:-1:exon

position:1972790:-1
position: 1972790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963411-1963848:-1:exon

LOC109937690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937690
product: nuclear factor of activated T cells 2 interacting protein, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020536194.2
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963411..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1977937..1978051))
location: region:1963411-1978051:-1
so has part: feature:1977937-1978051:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963411-1963848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1977937-1978051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963411-1963848:-1:exon

LOC109937690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937690
product: nuclear factor of activated T cells 2 interacting protein, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620950.1
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963411..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1977919..1977997))
location: region:1963411-1977997:-1
so has part: feature:1977919-1977997:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963411-1963848:-1:exon

position:1977997:-1
position: 1977997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977919-1977997:-1:exon

position:1977919:-1
position: 1977919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963411-1963848:-1:exon

LOC109937690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937690
product: nuclear factor of activated T cells 2 interacting protein, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620951.1
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963411..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1977850..1977869))
location: region:1963411-1977869:-1
so has part: feature:1977850-1977869:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963411-1963848:-1:exon

position:1977869:-1
position: 1977869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977850-1977869:-1:exon

position:1977850:-1
position: 1977850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963411-1963848:-1:exon

LOC109937690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937690
product: nuclear factor of activated T cells 2 interacting protein, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620952.1
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963411..1963848,1971432..1971535,1972724..1972790,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1976717..1976888))
location: region:1963411-1976888:-1
so has part: feature:1976717-1976888:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972790:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963411-1963848:-1:exon

position:1976888:-1
position: 1976888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1976717-1976888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963411-1963848:-1:exon

LOC109937690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937690
product: nuclear factor of activated T cells 2 interacting protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620947.1
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963411..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1976717..1976886))
location: region:1963411-1976886:-1
so has part: feature:1976717-1976886:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963411-1963848:-1:exon

position:1976886:-1
position: 1976886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1976717-1976886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963411-1963848:-1:exon

LOC109937690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NFATC2-interacting protein isoform X6
translation: MAPKVKNQRQKQKLELSSDSDSELELIDCPRHVRRPGIKRRRILDGTNVHAVPIYTGRVSRTLTLYQENPEEVDRAFQRLASEPDSEDDPDGNSELESRRHRRRKRPSAQAQRRGLHSDSEQDEDLNLSVSSSHKDRSPSPPSTPSTPSRRTRRACIAIREADRNLKQLKVFHSSPVNTRVQCESEDVVLVGVLPTVPTTPREITVKVRCRGEIYRIPMRVKDVEVPRIGTPESQNIGVADILDCFVMSEYPAQLTDKICLRVRGVEKNSFQVITIGKTESLKRLMEDYKERMDLQRCRLTFHFDGTELLENSTPQDNEMESDDVIDVRICSS
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963681..1963848,1971432..1971535,1972724..1972790,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1977937..1977975))
location: region:1963681-1977975:-1
so has part: feature:1977937-1977975:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972790:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963681-1963848:-1:exon

XP_048476910.1
type: Protein
SIO_000068: ncbiprotein

position:1963681:-1
position: 1963681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1977975:-1
position: 1977975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977937-1977975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963681-1963848:-1:exon

LOC109937690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NFATC2-interacting protein isoform X3
translation: MAPKVKNQRQKQKLELSSDSDSELELIDCPRHVRRPGIKRRRILDGTNVHAVPIYTGRVSRTLTLYQENPEEVDRAFQRLASEPDSEDDPDGNSELESRRHRRRKRPSAQAQRRGLHSDSEQDEDLNLSVSSSHKDRSPSPPSTPSTPSRRTRRACIAIREADRNLKQLKVFHSSPVNTRVQCESEDVVLVGVLPTVPTTPREITVKVRCRGEIYRIPMRVTEPLQKVIDYLSGRLKVKADRILLLQKDVEVPRIGTPESQNIGVADILDCFVMSEYPAQLTDKICLRVRGVEKNSFQVITIGKTESLKRLMEDYKERMDLQRCRLTFHFDGTELLENSTPQDNEMESDDVIDVRICSS
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963681..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1977937..1977975))
location: region:1963681-1977975:-1
so has part: feature:1977937-1977975:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963681-1963848:-1:exon

XP_020391783.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1977937-1977975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963681-1963848:-1:exon

LOC109937690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NFATC2-interacting protein isoform X2
translation: MAPKVKNQRQKQKVRNEEKLELSSDSDSELELIDCPRHVRRPGIKRRRILDGTNVHAVPIYTGRVSRTLTLYQENPEEVDRAFQRLASEPDSEDDPDGNSELESRRHRRRKRPSAQAQRRGLHSDSEQDEDLNLSVSSSHKDRSPSPPSTPSTPSRRTRRACIAIREADRNLKQLKVFHSSPVNTRVQCESEDVVLVGVLPTVPTTPREITVKVRCRGEIYRIPMRVTEPLQKVIDYLSGRLKVKADRILLLQKDVEVPRIGTPESQNIGVADILDCFVMSEYPAQLTDKICLRVRGVEKNSFQVITIGKTESLKRLMEDYKERMDLQRCRLTFHFDGTELLENSTPQDNEMESDDVIDVRICSS
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963681..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1977919..1977975))
location: region:1963681-1977975:-1
so has part: feature:1977919-1977975:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963681-1963848:-1:exon

XP_048476907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1977919-1977975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963681-1963848:-1:exon

LOC109937690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NFATC2-interacting protein isoform X4
translation: MNTAGQLELSSDSDSELELIDCPRHVRRPGIKRRRILDGTNVHAVPIYTGRVSRTLTLYQENPEEVDRAFQRLASEPDSEDDPDGNSELESRRHRRRKRPSAQAQRRGLHSDSEQDEDLNLSVSSSHKDRSPSPPSTPSTPSRRTRRACIAIREADRNLKQLKVFHSSPVNTRVQCESEDVVLVGVLPTVPTTPREITVKVRCRGEIYRIPMRVTEPLQKVIDYLSGRLKVKADRILLLQKDVEVPRIGTPESQNIGVADILDCFVMSEYPAQLTDKICLRVRGVEKNSFQVITIGKTESLKRLMEDYKERMDLQRCRLTFHFDGTELLENSTPQDNEMESDDVIDVRICSS
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963681..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1977850..1977867))
location: region:1963681-1977867:-1
so has part: feature:1977850-1977867:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963681-1963848:-1:exon

XP_048476908.1
type: Protein
SIO_000068: ncbiprotein

position:1977867:-1
position: 1977867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977850-1977867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963681-1963848:-1:exon

LOC109937690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NFATC2-interacting protein isoform X5
translation: MSRSGAPHLGSRCGGGIGNRGSHPCRMLELSSDSDSELELIDCPRHVRRPGIKRRRILDGTNVHAVPIYTGRVSRTLTLYQENPEEVDRAFQRLASEPDSEDDPDGNSELESRRHRRRKRPSAQAQRRGLHSDSEQDEDLNLSVSSSHKDRSPSPPSTPSTPSRRTRRACIAIREADRNLKQLKVFHSSPVNTRVQCESEDVVLVGVLPTVPTTPREITVKVRCRGEIYRIPMRVKDVEVPRIGTPESQNIGVADILDCFVMSEYPAQLTDKICLRVRGVEKNSFQVITIGKTESLKRLMEDYKERMDLQRCRLTFHFDGTELLENSTPQDNEMESDDVIDVRICSS
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963681..1963848,1971432..1971535,1972724..1972790,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1976717..1976797))
location: region:1963681-1976797:-1
so has part: feature:1976717-1976797:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972790:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963681-1963848:-1:exon

XP_048476909.1
type: Protein
SIO_000068: ncbiprotein

position:1976797:-1
position: 1976797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1976717-1976797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963681-1963848:-1:exon

LOC109937690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NFATC2-interacting protein isoform X1
translation: MSRSGAPHLGSRCGGGIGNRGSHPCRMLELSSDSDSELELIDCPRHVRRPGIKRRRILDGTNVHAVPIYTGRVSRTLTLYQENPEEVDRAFQRLASEPDSEDDPDGNSELESRRHRRRKRPSAQAQRRGLHSDSEQDEDLNLSVSSSHKDRSPSPPSTPSTPSRRTRRACIAIREADRNLKQLKVFHSSPVNTRVQCESEDVVLVGVLPTVPTTPREITVKVRCRGEIYRIPMRVTEPLQKVIDYLSGRLKVKADRILLLQKDVEVPRIGTPESQNIGVADILDCFVMSEYPAQLTDKICLRVRGVEKNSFQVITIGKTESLKRLMEDYKERMDLQRCRLTFHFDGTELLENSTPQDNEMESDDVIDVRICSS
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963681..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1976717..1976797))
location: region:1963681-1976797:-1
so has part: feature:1976717-1976797:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963681-1963848:-1:exon

XP_048476904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1976717-1976797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963681-1963848:-1:exon

LOC109937690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NFATC2-interacting protein isoform X1
translation: MSRSGAPHLGSRCGGGIGNRGSHPCRMLELSSDSDSELELIDCPRHVRRPGIKRRRILDGTNVHAVPIYTGRVSRTLTLYQENPEEVDRAFQRLASEPDSEDDPDGNSELESRRHRRRKRPSAQAQRRGLHSDSEQDEDLNLSVSSSHKDRSPSPPSTPSTPSRRTRRACIAIREADRNLKQLKVFHSSPVNTRVQCESEDVVLVGVLPTVPTTPREITVKVRCRGEIYRIPMRVTEPLQKVIDYLSGRLKVKADRILLLQKDVEVPRIGTPESQNIGVADILDCFVMSEYPAQLTDKICLRVRGVEKNSFQVITIGKTESLKRLMEDYKERMDLQRCRLTFHFDGTELLENSTPQDNEMESDDVIDVRICSS
SIO_010081: LOC109937690
subclass of: SO_0000673
so part of: LOC109937690
location: complement(join(1963681..1963848,1971432..1971535,1972724..1972868,1973310..1973493,1973752..1973841,1974491..1974626,1975057..1975135,1975902..1976036,1976717..1976797))
location: region:1963681-1976797:-1
so has part: feature:1976717-1976797:-1:exon
so has part: feature:1975902-1976036:-1:exon
so has part: feature:1975057-1975135:-1:exon
so has part: feature:1974491-1974626:-1:exon
so has part: feature:1973752-1973841:-1:exon
so has part: feature:1973310-1973493:-1:exon
so has part: feature:1972724-1972868:-1:exon
so has part: feature:1971432-1971535:-1:exon
so has part: feature:1963681-1963848:-1:exon

XP_048476906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1976717-1976797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975902-1976036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1975057-1975135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1974491-1974626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973752-1973841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973310-1973493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972724-1972868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971432-1971535:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963681-1963848:-1:exon

LOC109918637
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109918637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1982560..1987161
location: region:1982560-1987161:1
so has part: feature:1982560-1987161:1:exon
subclass of: SO_0000010

109918637
type: Gene
SIO_000068: ncbigene

position:1982560:1
position: 1982560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1987161:1
position: 1987161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1982560-1987161:1:exon

LOC109918637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918637
product: gastrula zinc finger protein XlCGF7.1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620961.1
SIO_010081: LOC109918637
subclass of: SO_0000673
so part of: LOC109918637
location: join(1982560..1982657,1982770..1982987,1983616..1987161)
location: region:1982560-1987161:1
so has part: feature:1982560-1982657:1:exon
so has part: feature:1982770-1982987:1:exon
so has part: feature:1983616-1987161:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1982560-1982657:1:exon

position:1982657:1
position: 1982657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1982770-1982987:1:exon

position:1982770:1
position: 1982770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982987:1
position: 1982987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1983616-1987161:1:exon

position:1983616:1
position: 1983616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109918637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918637
product: gastrula zinc finger protein XlCGF7.1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620960.1
SIO_010081: LOC109918637
subclass of: SO_0000673
so part of: LOC109918637
location: join(1982625..1982733,1983616..1987161)
location: region:1982625-1987161:1
so has part: feature:1982625-1982733:1:exon
so has part: feature:1983616-1987161:1:exon

position:1982625:1
position: 1982625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1982625-1982733:1:exon

position:1982733:1
position: 1982733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1983616-1987161:1:exon

LOC109918637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918637
product: gastrula zinc finger protein XlCGF7.1-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620963.1
SIO_010081: LOC109918637
subclass of: SO_0000673
so part of: LOC109918637
location: join(1982643..1982733,1983588..1987161)
location: region:1982643-1987161:1
so has part: feature:1982643-1982733:1:exon
so has part: feature:1983588-1987161:1:exon

position:1982643:1
position: 1982643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1982643-1982733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1983588-1987161:1:exon

position:1983588:1
position: 1983588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109918637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918637
product: gastrula zinc finger protein XlCGF7.1-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620962.1
SIO_010081: LOC109918637
subclass of: SO_0000673
so part of: LOC109918637
location: join(1982644..1982733,1983584..1987161)
location: region:1982644-1987161:1
so has part: feature:1982644-1982733:1:exon
so has part: feature:1983584-1987161:1:exon

position:1982644:1
position: 1982644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1982644-1982733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1983584-1987161:1:exon

position:1983584:1
position: 1983584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109918637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF7.1-like
translation: MNKSWKCGHCGEGFPSPSALDIHERRHTGERPFTCFVCEKGFISVSNLLRHQQVHTVERPFTCAVCGKGFSDSHNLLQHQRIHTGERPFTCSQCGKGFTQLSNLHVHQRVHTGEKPFTCSQCGKGFTQLSNLQAHQRVHTGEKPFTCSQCGEGFSRLSNLQKHQRVHTGERPFICSQCGKGFTQSSHLQKHQQIHTKEKLFTCSQCGKEFTRLSSLQKHQRGHE
SIO_010081: LOC109918637
subclass of: SO_0000673
so part of: LOC109918637
location: 1983977..1984651
location: region:1983977-1984651:1
so has part: feature:1983977-1984651:1:exon

XP_048476917.1
type: Protein
SIO_000068: ncbiprotein

position:1983977:1
position: 1983977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1984651:1
position: 1984651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1983977-1984651:1:exon

LOC109918637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF7.1-like
translation: MNKSWKCGHCGEGFPSPSALDIHERRHTGERPFTCFVCEKGFISVSNLLRHQQVHTVERPFTCAVCGKGFSDSHNLLQHQRIHTGERPFTCSQCGKGFTQLSNLHVHQRVHTGEKPFTCSQCGKGFTQLSNLQAHQRVHTGEKPFTCSQCGEGFSRLSNLQKHQRVHTGERPFICSQCGKGFTQSSHLQKHQQIHTKEKLFTCSQCGKEFTRLSSLQKHQRGHE
SIO_010081: LOC109918637
subclass of: SO_0000673
so part of: LOC109918637
location: 1983977..1984651
location: region:1983977-1984651:1
so has part: feature:1983977-1984651:1:exon

XP_048476918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1983977-1984651:1:exon

LOC109918637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF7.1-like
translation: MNKSWKCGHCGEGFPSPSALDIHERRHTGERPFTCFVCEKGFISVSNLLRHQQVHTVERPFTCAVCGKGFSDSHNLLQHQRIHTGERPFTCSQCGKGFTQLSNLHVHQRVHTGEKPFTCSQCGKGFTQLSNLQAHQRVHTGEKPFTCSQCGEGFSRLSNLQKHQRVHTGERPFICSQCGKGFTQSSHLQKHQQIHTKEKLFTCSQCGKEFTRLSSLQKHQRGHE
SIO_010081: LOC109918637
subclass of: SO_0000673
so part of: LOC109918637
location: 1983977..1984651
location: region:1983977-1984651:1
so has part: feature:1983977-1984651:1:exon

XP_048476919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1983977-1984651:1:exon

LOC109918637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF7.1-like
translation: MNKSWKCGHCGEGFPSPSALDIHERRHTGERPFTCFVCEKGFISVSNLLRHQQVHTVERPFTCAVCGKGFSDSHNLLQHQRIHTGERPFTCSQCGKGFTQLSNLHVHQRVHTGEKPFTCSQCGKGFTQLSNLQAHQRVHTGEKPFTCSQCGEGFSRLSNLQKHQRVHTGERPFICSQCGKGFTQSSHLQKHQQIHTKEKLFTCSQCGKEFTRLSSLQKHQRGHE
SIO_010081: LOC109918637
subclass of: SO_0000673
so part of: LOC109918637
location: 1983977..1984651
location: region:1983977-1984651:1
so has part: feature:1983977-1984651:1:exon

XP_048476920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1983977-1984651:1:exon

LOC125488102
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1990214..2001624
location: region:1990214-2001624:1
so has part: feature:1990214-2001624:1:exon
subclass of: SO_0000011

125488102
type: Gene
SIO_000068: ncbigene

position:1990214:1
position: 1990214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001624:1
position: 2001624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1990214-2001624:1:exon

LOC125488102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125488102
product: uncharacterized LOC125488102, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007266214.1
SIO_010081: LOC125488102
subclass of: SO_0000673
so part of: LOC125488102
location: join(1990214..1990297,1994124..1994259,1994692..1994773,2001430..2001624)
location: region:1990214-2001624:1
so has part: feature:1990214-1990297:1:exon
so has part: feature:1994124-1994259:1:exon
so has part: feature:1994692-1994773:1:exon
so has part: feature:2001430-2001624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1990214-1990297:1:exon

position:1990297:1
position: 1990297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1994124-1994259:1:exon

position:1994124:1
position: 1994124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994259:1
position: 1994259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1994692-1994773:1:exon

position:1994692:1
position: 1994692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994773:1
position: 1994773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2001430-2001624:1:exon

position:2001430:1
position: 2001430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125488102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125488102
product: uncharacterized LOC125488102, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_007266213.1
SIO_010081: LOC125488102
subclass of: SO_0000673
so part of: LOC125488102
location: join(1990214..1990297,1994124..1994259,1994692..1994773,1998453..1999089)
location: region:1990214-1999089:1
so has part: feature:1990214-1990297:1:exon
so has part: feature:1994124-1994259:1:exon
so has part: feature:1994692-1994773:1:exon
so has part: feature:1998453-1999089:1:exon

position:1999089:1
position: 1999089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1990214-1990297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1994124-1994259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1994692-1994773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1998453-1999089:1:exon

position:1998453:1
position: 1998453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924347
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2745530..2745985)
location: region:2745530-2745985:-1
so has part: feature:2745530-2745985:-1:exon
subclass of: SO_0000010

109924347
type: Gene
SIO_000068: ncbigene

position:2745530:-1
position: 2745530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2745985:-1
position: 2745985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2745530-2745985:-1:exon

LOC109924347
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924347
product: cardiotrophin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_020524355.1
SIO_010081: LOC109924347
subclass of: SO_0000673
so part of: LOC109924347
location: complement(2745530..2745985)
location: region:2745530-2745985:-1
so has part: feature:2745530-2745985:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2745530-2745985:-1:exon

LOC109924347
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cardiotrophin-2-like
translation: MGLPFSEPDFTLPDVFLLGLPSPSIGYLAWRRLTDGERLSETYRVYNLQLEYLQLVLDDLRALDLGQGPGQLSEQLTFTQAQLQGFVTNLRSLLESLAQPLPTVGKTLDSEAHRPSDFERKLRGYLVCREYVHWIDRTLRDFTLLLDKFPA
SIO_010081: LOC109924347
subclass of: SO_0000673
so part of: LOC109924347
location: complement(2745530..2745985)
location: region:2745530-2745985:-1
so has part: feature:2745530-2745985:-1:exon

XP_020379944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2745530-2745985:-1:exon

LOC109924054
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2767919..2814459
location: region:2767919-2814459:1
so has part: feature:2767919-2814459:1:exon
subclass of: SO_0000010

109924054
type: Gene
SIO_000068: ncbigene

position:2767919:1
position: 2767919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814459:1
position: 2814459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2767919-2814459:1:exon

LOC109924054
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924054
product: gastrula zinc finger protein XlCGF57.1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620956.1
SIO_010081: LOC109924054
subclass of: SO_0000673
so part of: LOC109924054
location: join(2767919..2768030,2771358..2772065,2773653..2773750,2776704..2776833,2779577..2779679,2783374..2785705,2792000..2792357,2793689..2794954,2810191..2814459)
location: region:2767919-2814459:1
so has part: feature:2767919-2768030:1:exon
so has part: feature:2771358-2772065:1:exon
so has part: feature:2773653-2773750:1:exon
so has part: feature:2776704-2776833:1:exon
so has part: feature:2779577-2779679:1:exon
so has part: feature:2783374-2785705:1:exon
so has part: feature:2792000-2792357:1:exon
so has part: feature:2793689-2794954:1:exon
so has part: feature:2810191-2814459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2767919-2768030:1:exon

position:2768030:1
position: 2768030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2771358-2772065:1:exon

position:2771358:1
position: 2771358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2772065:1
position: 2772065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2773653-2773750:1:exon

position:2773653:1
position: 2773653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2773750:1
position: 2773750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2776704-2776833:1:exon

position:2776704:1
position: 2776704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2776833:1
position: 2776833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2779577-2779679:1:exon

position:2779577:1
position: 2779577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2779679:1
position: 2779679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2783374-2785705:1:exon

position:2783374:1
position: 2783374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2785705:1
position: 2785705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2792000-2792357:1:exon

position:2792000:1
position: 2792000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2792357:1
position: 2792357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2793689-2794954:1:exon

position:2793689:1
position: 2793689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2794954:1
position: 2794954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2810191-2814459:1:exon

position:2810191:1
position: 2810191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924348
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2768026..2771123
location: region:2768026-2771123:1
so has part: feature:2768026-2771123:1:exon
subclass of: SO_0000010

109924348
type: Gene
SIO_000068: ncbigene

position:2768026:1
position: 2768026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771123:1
position: 2771123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2768026-2771123:1:exon

LOC109924348
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924348
product: gastrula zinc finger protein XlCGF26.1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620954.1
SIO_010081: LOC109924348
subclass of: SO_0000673
so part of: LOC109924348
location: 2768026..2771123
location: region:2768026-2771123:1
so has part: feature:2768026-2771123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2768026-2771123:1:exon

LOC109924348
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF26.1-like
translation: MNKSWKCGHCRQGLPSPSALEIHERRHTGERPFTCFVCEKGFSAVCDLLTHQKAHAVEQPFTSDCGKGLTDISTHLTHKRVDNQKRVFPCSECGKVFTNSTSLLRHQRVHTGERPFNCSQCGKGFSDSHTVLRHERIHTGERPFTCSHCGKGFMQLPDLQKHQRVHTGERPFTCSQCGKGFTQISNLQRHQRAHTGERPFTCSECGKGFTQLSSLQKHQRIHKEERQFTCSQCGKEFTQLSNLQRHQRVHTGERPFTCSQCGKGFAESSDLVIHQRTHTGERPFTCSLCGKGFSHLHVMLQHERIHTGERPFVCSQCGKGFTQLSNLQRHQRVHSGERPFNCVQCGKGFTQLSNLQRHQRVHTGERPFSCSQCGKGFAESSDLVIHQLIHTGERPFTCSRCGKGFSDPRAVPQHERIHTGDRPFACSQCGKGFYRLSSLQNHQRVHTGERLFTCSQCGKGFTQSSNLQAHQRVHTGEKPFTCSQCGKGFTQLSSLQKHHRFHTKERLITCSRLGK
SIO_010081: LOC109924348
subclass of: SO_0000673
so part of: LOC109924348
location: 2768195..2769742
location: region:2768195-2769742:1
so has part: feature:2768195-2769742:1:exon

XP_048476911.1
type: Protein
SIO_000068: ncbiprotein

position:2768195:1
position: 2768195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2769742:1
position: 2769742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2768195-2769742:1:exon

LOC109924054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF6-like isoform X2
translation: MNKSWKCGYCGKGFPSPPALEIHERRHTGERPFTCFVCEKGFSAVCDLLTHQKAHTVEQPFTSDCGKGLTDISTPLTHKRVDNQKRVFPCSECGKKFTNSTNLLRHKRVHTGERPFTCSQCGKGFSDSHAVLRHELIHTGERPFVCSQCGKGFTQISYLQRHQRVHTGEKPFTCSQCGKGFTQLSSVQRHKRVHTGERPYTCCECGKGFAQTSDLVIHQRIHNGERPFTCSQCGKGFTQLSNLQSHQRVHTGERPYTCSECGKRFTHLSNLQKHQRVHTGERPFTCSQCGKGFTQLSNLQKHHQIHTEEREFPCSDCGKGFSNSANLLRHKRVHTGERPYTCCECGKQFAQSAGLVIHQRIHTGERPFTCSQCGKGFSDSHTLLQHERIHTGERPFICSQCGKGFTQVSNLQAHQRVHTGERPFTCSQCGKGFTHLSSLQIHQRVHTGERPFTCSQCGKGFSRLSSLQKHQRVHTGERPFNCSQCGKGFTQLSNLQRHQRVHTRERPFTCSQCGKGFTQSLHLQAHQQVHTGERPFTCSQCGKEFTCSSRLQRHQRVHTRERSFNCSQCGKGFTQSSHLQAHQRVHTGERPFTCPQCGKGFTCSSHLQRHQRVHTGEKLFTCSQCGKGFSQLSNLQAHQRVHTGERPFTCSQCGKGFTHLSNLLRHQRVHTGDRPFTCSQCGKRFTQLSNLQKHQRRHK
SIO_010081: LOC109924054
subclass of: SO_0000673
so part of: LOC109924054
location: join(2794026..2794954,2810191..2811361)
location: region:2794026-2811361:1
so has part: feature:2794026-2794954:1:exon
so has part: feature:2810191-2811361:1:exon

XP_048476913.1
type: Protein
SIO_000068: ncbiprotein

position:2794026:1
position: 2794026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2811361:1
position: 2811361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2794026-2794954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2810191-2811361:1:exon

LOC109924054
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924054
product: gastrula zinc finger protein XlCGF57.1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620955.1
SIO_010081: LOC109924054
subclass of: SO_0000673
so part of: LOC109924054
location: join(2808395..2808507,2809584..2814459)
location: region:2808395-2814459:1
so has part: feature:2808395-2808507:1:exon
so has part: feature:2809584-2814459:1:exon

position:2808395:1
position: 2808395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2808395-2808507:1:exon

position:2808507:1
position: 2808507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2809584-2814459:1:exon

position:2809584:1
position: 2809584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF57.1-like isoform X1
translation: MSKSWKCGYCGKGFHYPSALEIHERRHTGERPFTCFVCEKGFSAVSNLLTHQKVHVVEKPFTSDCGNGLADISTPLTRKRVHTKKREFPCSDCGKGFSNSANLLRHKRVHTGERPYTCCECGKQFAQSAGLVIHQRIHTGERPFTCSQCGKGFSDSHTLLQHERIHTGERPFICSQCGKGFTQVSNLQAHQRVHTGERPFTCSQCGKGFTHLSSLQIHQRVHTGERPFTCSQCGKGFSRLSSLQKHQRVHTGERPFNCSQCGKGFTQLSNLQRHQRVHTRERPFTCSQCGKGFTQSLHLQAHQQVHTGERPFTCSQCGKEFTCSSRLQRHQRVHTRERSFNCSQCGKGFTQSSHLQAHQRVHTGERPFTCPQCGKGFTCSSHLQRHQRVHTGEKLFTCSQCGKGFSQLSNLQAHQRVHTGERPFTCSQCGKGFTHLSNLLRHQRVHTGDRPFTCSQCGKRFTQLSNLQKHQRRHK
SIO_010081: LOC109924054
subclass of: SO_0000673
so part of: LOC109924054
location: 2809934..2811361
location: region:2809934-2811361:1
so has part: feature:2809934-2811361:1:exon

XP_048476912.1
type: Protein
SIO_000068: ncbiprotein

position:2809934:1
position: 2809934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2809934-2811361:1:exon

trnat-ugu
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnat-ugu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2881340..2881412)
location: region:2881340-2881412:-1
so has part: feature:2881340-2881412:-1:exon
subclass of: SO_0000663

125488111
type: Gene
SIO_000068: ncbigene

position:2881340:-1
position: 2881340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2881412:-1
position: 2881412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881340-2881412:-1:exon

trnat-ugu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnat-ugu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2881377..2881379),aa:Thr, seq:tgt)
SIO_010081: trnat-ugu
subclass of: SO_0000673
so part of: trnat-ugu
location: complement(2881340..2881412)
location: region:2881340-2881412:-1
so has part: feature:2881340-2881412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881340-2881412:-1:exon

LOC125488103
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2893759..2944165
location: region:2893759-2944165:1
so has part: feature:2893759-2944165:1:exon
subclass of: SO_0000011

125488103
type: Gene
SIO_000068: ncbigene

position:2893759:1
position: 2893759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2944165:1
position: 2944165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893759-2944165:1:exon

LOC125488103
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125488103
product: uncharacterized LOC125488103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007266215.1
SIO_010081: LOC125488103
subclass of: SO_0000673
so part of: LOC125488103
location: join(2893759..2893930,2942234..2942327,2943938..2944165)
location: region:2893759-2944165:1
so has part: feature:2893759-2893930:1:exon
so has part: feature:2942234-2942327:1:exon
so has part: feature:2943938-2944165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2893759-2893930:1:exon

position:2893930:1
position: 2893930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2942234-2942327:1:exon

position:2942234:1
position: 2942234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2942327:1
position: 2942327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2943938-2944165:1:exon

position:2943938:1
position: 2943938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109932427
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109932427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2907487..2914402)
location: region:2907487-2914402:-1
so has part: feature:2907487-2914402:-1:exon
subclass of: SO_0000010

109932427
type: Gene
SIO_000068: ncbigene

position:2907487:-1
position: 2907487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2914402:-1
position: 2914402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907487-2914402:-1:exon

LOC109932427
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932427
product: cardiotrophin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048620964.1
SIO_010081: LOC109932427
subclass of: SO_0000673
so part of: LOC109932427
location: complement(join(2907487..2908584,2910894..2911030,2914335..2914402))
location: region:2907487-2914402:-1
so has part: feature:2914335-2914402:-1:exon
so has part: feature:2910894-2911030:-1:exon
so has part: feature:2907487-2908584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2914335-2914402:-1:exon

position:2914335:-1
position: 2914335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2910894-2911030:-1:exon

position:2910894:-1
position: 2910894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2911030:-1
position: 2911030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2907487-2908584:-1:exon

position:2908584:-1
position: 2908584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109932427
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cardiotrophin-2-like
translation: MQDLRGILSLLLIQLLGHSQGAPIAVPTLIGQTHDLLLLLQEKASALLSTYLTAMGLPFSEPGFSLPDMTLIGLPSPSIGYLAWRRLTDGQRLSENYRAYSLQLEYLQLVLDDLQALGLGQSSGKLTEQLTTCRTQIQGLLANLRSLLEALAQPLPAIGEPLDSKAYGTSDFERKLRGYIVCREYVRWIDRTLRDFALLSDSAST
SIO_010081: LOC109932427
subclass of: SO_0000673
so part of: LOC109932427
location: complement(join(2908120..2908584,2910894..2911030,2914335..2914350))
location: region:2908120-2914350:-1
so has part: feature:2914335-2914350:-1:exon
so has part: feature:2910894-2911030:-1:exon
so has part: feature:2908120-2908584:-1:exon

XP_048476921.1
type: Protein
SIO_000068: ncbiprotein

position:2908120:-1
position: 2908120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2914350:-1
position: 2914350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2914335-2914350:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2910894-2911030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2908120-2908584:-1:exon

LOC125488080
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2999949..3036580)
location: region:2999949-3036580:-1
so has part: feature:2999949-3036580:-1:exon
subclass of: SO_0000010

125488080
type: Gene
SIO_000068: ncbigene

position:2999949:-1
position: 2999949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3036580:-1
position: 3036580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2999949-3036580:-1:exon

LOC125488080
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488080
product: uncharacterized LOC125488080
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048620902.1
SIO_010081: LOC125488080
subclass of: SO_0000673
so part of: LOC125488080
location: complement(join(2999949..3000865,3011741..3011924,3022607..3022717,3025576..3025729,3036306..3036580))
location: region:2999949-3036580:-1
so has part: feature:3036306-3036580:-1:exon
so has part: feature:3025576-3025729:-1:exon
so has part: feature:3022607-3022717:-1:exon
so has part: feature:3011741-3011924:-1:exon
so has part: feature:2999949-3000865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3036306-3036580:-1:exon

position:3036306:-1
position: 3036306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3025576-3025729:-1:exon

position:3025576:-1
position: 3025576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3025729:-1
position: 3025729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3022607-3022717:-1:exon

position:3022607:-1
position: 3022607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022717:-1
position: 3022717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3011741-3011924:-1:exon

position:3011741:-1
position: 3011741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3011924:-1
position: 3011924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2999949-3000865:-1:exon

position:3000865:-1
position: 3000865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125488080
translation: MLLEREVESVHVTPRGTECESQHAARTTACGALNIAELPVILRGFKARGVKDHSEYRWSESEREAVTGECYMVVDTSFSKYLVKYVRGRKESEKTVAVVLGTVTTVSSLKKIFWYFALTSEYQQMNFPWFRAALDNVRSSPVWLHSDRMDQLEEKLEALRSIQAAESVIDRSFSEVVTSQGKKLRGCGVPLGVKEEWTSVSRREQCLQKTDKEGEGSMRLVVAPSREVTEMVVHDLLNVDAANLATIWILSQRKCGLSKCVIVYMLAMATTDLLVLINNVILYHIFSYHFPLSFLSYTSICRLIIYMTAFTPDLSVWCIVSFTFDRFVAICCQKFQTKYCTKRTAIMLLIAITVVIVLKEIPVLFAYEPEKIINKIQWGCRSDAAFFASSAGIGYVWFYSACVIWIPFTLIILCNSLTVQRIVLANRTRTGLRSSKNRNQRDSEMENRRKSIILLFSISVSFLLLWLTNAVSLGVTKLTGTVYYRGKFTNPAFIAIELGNALKFFSCLLNPFIYAATQSKFRAELKNMVKFPWILFDCFVRQKPTK
SIO_010081: LOC125488080
subclass of: SO_0000673
so part of: LOC125488080
location: complement(join(2999949..3000865,3011741..3011924,3022607..3022717,3025576..3025729,3036306..3036580))
location: region:2999949-3036580:-1
so has part: feature:3036306-3036580:-1:exon
so has part: feature:3025576-3025729:-1:exon
so has part: feature:3022607-3022717:-1:exon
so has part: feature:3011741-3011924:-1:exon
so has part: feature:2999949-3000865:-1:exon

XP_048476859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036306-3036580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3025576-3025729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3022607-3022717:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3011741-3011924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2999949-3000865:-1:exon

LOC109924359
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3163347..3168624
location: region:3163347-3168624:1
so has part: feature:3163347-3168624:1:exon
subclass of: SO_0000010

109924359
type: Gene
SIO_000068: ncbigene

position:3163347:1
position: 3163347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3168624:1
position: 3168624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3163347-3168624:1:exon

LOC109924359
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924359
product: zinc finger protein 229-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020524366.2
SIO_010081: LOC109924359
subclass of: SO_0000673
so part of: LOC109924359
location: join(3163347..3163458,3164369..3168624)
location: region:3163347-3168624:1
so has part: feature:3163347-3163458:1:exon
so has part: feature:3164369-3168624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3163347-3163458:1:exon

position:3163458:1
position: 3163458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3164369-3168624:1:exon

position:3164369:1
position: 3164369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924359
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 229-like
translation: MNKSWKCGHCGDGFRCPSKLEIHQRRHTGERPFTCFVCRKGFSTVSSLLRHQHIHNVERPFTCSECGKGFTDSGNLLRHKRVHTGERPFTCCECGKGFTQSFALVIHQRIHTGEKPFTCSQCGKGFSESCNLLQHQRIHTKEKPFICSQCGKGFTQLSKLKVHQRVHTGERPFTCSQCGKGFTQLSSLQVHQRLHTGERPFTCSQCGKGFTQLSNLQAHQRVHTKERSFTCSQCGKEFTRLSSLQKHQRVHTSEKPFTCSQCGKGFSRLSNLQAHQRVHTGERPFTCSQCGKGFSRLCNLQAHQRVHTGERPFTCSQCRKGFTELSSLQAHQRVHTGERPFTCSQCGKGFKQLSSLQAHQRVHTRERPFTCSQCGKGFTQLSNLQSHQRVHTREKPFTCSQCGKGFTRLPSLQKHQRDHE
SIO_010081: LOC109924359
subclass of: SO_0000673
so part of: LOC109924359
location: 3164733..3165995
location: region:3164733-3165995:1
so has part: feature:3164733-3165995:1:exon

XP_020379955.2
type: Protein
SIO_000068: ncbiprotein

position:3164733:1
position: 3164733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3165995:1
position: 3165995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3164733-3165995:1:exon

LOC125488104
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3173749..3189322
location: region:3173749-3189322:1
so has part: feature:3173749-3189322:1:exon
subclass of: SO_0000011

125488104
type: Gene
SIO_000068: ncbigene

position:3173749:1
position: 3173749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3189322:1
position: 3189322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3173749-3189322:1:exon

LOC125488104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125488104
product: uncharacterized LOC125488104
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007266216.1
SIO_010081: LOC125488104
subclass of: SO_0000673
so part of: LOC125488104
location: join(3173749..3174679,3188025..3189322)
location: region:3173749-3189322:1
so has part: feature:3173749-3174679:1:exon
so has part: feature:3188025-3189322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3173749-3174679:1:exon

position:3174679:1
position: 3174679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3188025-3189322:1:exon

position:3188025:1
position: 3188025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125488101
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3196170..3203157)
location: region:3196170-3203157:-1
so has part: feature:3196170-3203157:-1:exon
subclass of: SO_0000010

125488101
type: Gene
SIO_000068: ncbigene

position:3196170:-1
position: 3196170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203157:-1
position: 3203157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3196170-3203157:-1:exon

LOC125488101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488101
product: probable G-protein coupled receptor 139, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048620958.1
SIO_010081: LOC125488101
subclass of: SO_0000673
so part of: LOC125488101
location: complement(join(3196170..3197491,3202592..3202684,3203105..3203157))
location: region:3196170-3203157:-1
so has part: feature:3203105-3203157:-1:exon
so has part: feature:3202592-3202684:-1:exon
so has part: feature:3196170-3197491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3203105-3203157:-1:exon

position:3203105:-1
position: 3203105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3202592-3202684:-1:exon

position:3202592:-1
position: 3202592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3202684:-1
position: 3202684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3196170-3197491:-1:exon

position:3197491:-1
position: 3197491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488101
product: probable G-protein coupled receptor 139, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048620957.1
SIO_010081: LOC125488101
subclass of: SO_0000673
so part of: LOC125488101
location: complement(join(3196170..3197491,3202592..3202998))
location: region:3196170-3202998:-1
so has part: feature:3202592-3202998:-1:exon
so has part: feature:3196170-3197491:-1:exon

position:3202998:-1
position: 3202998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202592-3202998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3196170-3197491:-1:exon

LOC125488101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MEFNLVAIVILYQGNCGLSKCITCYLMAMSAADLLLVIINIILNRINNIYFPLTFLFITPVCAVRAVLLLAALDCSVWFTVAFTFDRFVAICCQKLKPRYCTEKTATVVIVIVAVISCLRSTVWYFLFVPSIIIDNVPWFCIQGPDYYTSPLWAAYEWIDSILTPLLPIFLILVFNGLTVRNIIKANRLRRGFRCHGSGQDNIDPEMENRRKSIILLFALSANFILLWMTYVTHSLNWQVINYNYLDKTISGPVYVAQQFGFMLRLLSSCTNTCIYALTQTKFREELKNGIKYPFTLIVTLFK
SIO_010081: LOC125488101
subclass of: SO_0000673
so part of: LOC125488101
location: complement(join(3196587..3197491,3202592..3202598))
location: region:3196587-3202598:-1
so has part: feature:3202592-3202598:-1:exon
so has part: feature:3196587-3197491:-1:exon

XP_048476914.1
type: Protein
SIO_000068: ncbiprotein

position:3196587:-1
position: 3196587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3202598:-1
position: 3202598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202592-3202598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3196587-3197491:-1:exon

LOC125488101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MEFNLVAIVILYQGNCGLSKCITCYLMAMSAADLLLVIINIILNRINNIYFPLTFLFITPVCAVRAVLLLAALDCSVWFTVAFTFDRFVAICCQKLKPRYCTEKTATVVIVIVAVISCLRSTVWYFLFVPSIIIDNVPWFCIQGPDYYTSPLWAAYEWIDSILTPLLPIFLILVFNGLTVRNIIKANRLRRGFRCHGSGQDNIDPEMENRRKSIILLFALSANFILLWMTYVTHSLNWQVINYNYLDKTISGPVYVAQQFGFMLRLLSSCTNTCIYALTQTKFREELKNGIKYPFTLIVTLFK
SIO_010081: LOC125488101
subclass of: SO_0000673
so part of: LOC125488101
location: complement(join(3196587..3197491,3202592..3202598))
location: region:3196587-3202598:-1
so has part: feature:3202592-3202598:-1:exon
so has part: feature:3196587-3197491:-1:exon

XP_048476915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3202592-3202598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3196587-3197491:-1:exon

LOC125488081
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3227297..3237703
location: region:3227297-3237703:1
so has part: feature:3227297-3237703:1:exon
subclass of: SO_0000010

125488081
type: Gene
SIO_000068: ncbigene

position:3227297:1
position: 3227297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3237703:1
position: 3237703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3227297-3237703:1:exon

LOC125488081
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488081
product: zinc finger protein 595-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048620903.1
SIO_010081: LOC125488081
subclass of: SO_0000673
so part of: LOC125488081
location: join(3227297..3227366,3230587..3231501,3237282..3237703)
location: region:3227297-3237703:1
so has part: feature:3227297-3227366:1:exon
so has part: feature:3230587-3231501:1:exon
so has part: feature:3237282-3237703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3227297-3227366:1:exon

position:3227366:1
position: 3227366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3230587-3231501:1:exon

position:3230587:1
position: 3230587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231501:1
position: 3231501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3237282-3237703:1:exon

position:3237282:1
position: 3237282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125488081
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 595-like
translation: MHAPPKNLLFSIYYPVLAVIGIPANLAVIAILPRRGCGLSVCITYYLVSMAVTDLFVMVIAVILNRIAGMFFPSSFLFITPICSLRIVLIYIAIDSSVWLTVAFTFDRFVAICCQKLKMKYCTKKMAVRIITIVMVLVCGKDTFLYFVYEPVYISNNVPWFCVLKLMFYSSPAWVAYDVIRSVLNPCLPFILILLLNGLTVRHILAANRARRRLRTRNSGENRRDPEMEKRKKSMVLLFTISGSFILLYSLFFVTILYVRIGKVIYFSGSNSNGSSFNLEETGYMLQFLSSCINAFIYTGTQNKFRTELKNGVKYPISLFIKIANLRKKHQQVHTWKTPFSCSECGRGFTRSSNLLRHQQVHTAERSFKCPDCGKCYRSSWELNCHQCVHTEERHFKCSDYGNPYAHSWGRFYRQRVHTEESPFKRLVCGKCYRSSVELMSRQHFHMMRHLSGAFIVGLGPGDHLNSE
SIO_010081: LOC125488081
subclass of: SO_0000673
so part of: LOC125488081
location: join(3227297..3227366,3230587..3231501,3237282..3237703)
location: region:3227297-3237703:1
so has part: feature:3227297-3227366:1:exon
so has part: feature:3230587-3231501:1:exon
so has part: feature:3237282-3237703:1:exon

XP_048476860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3227297-3227366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3230587-3231501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3237282-3237703:1:exon

LOC125488082
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3273139..3285170
location: region:3273139-3285170:1
so has part: feature:3273139-3285170:1:exon

125488082
type: Gene
SIO_000068: ncbigene

position:3273139:1
position: 3273139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3285170:1
position: 3285170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3273139-3285170:1:exon

LOC125488082
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488082
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125488082
subclass of: SO_0000673
so part of: LOC125488082
location: 3273139..3273939
location: region:3273139-3273939:1
so has part: feature:3273139-3273939:1:exon

position:3273939:1
position: 3273939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3273139-3273939:1:exon

LOC125488082
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488082
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125488082
subclass of: SO_0000673
so part of: LOC125488082
location: 3274316..3274385
location: region:3274316-3274385:1
so has part: feature:3274316-3274385:1:exon

position:3274316:1
position: 3274316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3274385:1
position: 3274385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3274316-3274385:1:exon

LOC125488082
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488082
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125488082
subclass of: SO_0000673
so part of: LOC125488082
location: 3284855..3285170
location: region:3284855-3285170:1
so has part: feature:3284855-3285170:1:exon

position:3284855:1
position: 3284855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3284855-3285170:1:exon

LOC125488083
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3289907..3290737
location: region:3289907-3290737:1
so has part: feature:3289907-3290737:1:exon
subclass of: SO_0000010

125488083
type: Gene
SIO_000068: ncbigene

position:3289907:1
position: 3289907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3290737:1
position: 3290737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3289907-3290737:1:exon

LOC125488083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488083
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048620905.1
SIO_010081: LOC125488083
subclass of: SO_0000673
so part of: LOC125488083
location: 3289907..3290737
location: region:3289907-3290737:1
so has part: feature:3289907-3290737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3289907-3290737:1:exon

LOC125488083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MAVADLLVIINAILLNRIPAIYFPSSFLSVTPLCSLSIMLIYAARDISVWLTVVFTFDRFVAISCQKLKLKYCTEKMASAIIGTVSVLGCLKNIPWYFLHEPVYIIDDIPWYCRLKQIRYTSSMWGAFQWTDRILTPCLPFFLILFLNTLTVRNIMAANKACKTFQIWRSKDNQNDPEMENRRKSIILLFSISGSFDILWVVYVAQFFVDRFMKNYTISGFSDPLFILRECANMLQLLSCCTNTFIYAVTQSKFREQLHNLIYYLLTPIVAHKNMK
SIO_010081: LOC125488083
subclass of: SO_0000673
so part of: LOC125488083
location: 3289907..3290737
location: region:3289907-3290737:1
so has part: feature:3289907-3290737:1:exon

XP_048476862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3289907-3290737:1:exon

LOC109916364
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109916364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3443734..3477523)
location: region:3443734-3477523:-1
so has part: feature:3443734-3477523:-1:exon

109916364
type: Gene
SIO_000068: ncbigene

position:3443734:-1
position: 3443734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3477523:-1
position: 3477523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3443734-3477523:-1:exon

LOC109916364
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC109916364
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC109916364
subclass of: SO_0000673
so part of: LOC109916364
location: complement(3443734..3444273)
location: region:3443734-3444273:-1
so has part: feature:3443734-3444273:-1:exon

position:3444273:-1
position: 3444273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3443734-3444273:-1:exon

LOC109916364
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC109916364
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC109916364
subclass of: SO_0000673
so part of: LOC109916364
location: complement(3477433..3477523)
location: region:3477433-3477523:-1
so has part: feature:3477433-3477523:-1:exon

position:3477433:-1
position: 3477433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3477433-3477523:-1:exon

LOC125488105
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3593432..3598153
location: region:3593432-3598153:1
so has part: feature:3593432-3598153:1:exon
subclass of: SO_0000010

125488105
type: Gene
SIO_000068: ncbigene

position:3593432:1
position: 3593432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3598153:1
position: 3598153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3593432-3598153:1:exon

LOC125488105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488105
product: perforin-1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620968.1
SIO_010081: LOC125488105
subclass of: SO_0000673
so part of: LOC125488105
location: join(3593432..3593534,3594666..3595141,3596188..3598153)
location: region:3593432-3598153:1
so has part: feature:3593432-3593534:1:exon
so has part: feature:3594666-3595141:1:exon
so has part: feature:3596188-3598153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3593432-3593534:1:exon

position:3593534:1
position: 3593534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3594666-3595141:1:exon

position:3594666:1
position: 3594666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3595141:1
position: 3595141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3596188-3598153:1:exon

position:3596188:1
position: 3596188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125488105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488105
product: perforin-1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620969.1
SIO_010081: LOC125488105
subclass of: SO_0000673
so part of: LOC125488105
location: join(3593489..3593534,3594435..3595141,3596188..3598153)
location: region:3593489-3598153:1
so has part: feature:3593489-3593534:1:exon
so has part: feature:3594435-3595141:1:exon
so has part: feature:3596188-3598153:1:exon

position:3593489:1
position: 3593489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3593489-3593534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3594435-3595141:1:exon

position:3594435:1
position: 3594435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3596188-3598153:1:exon

LOC125488105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488105
product: perforin-1-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620971.1
SIO_010081: LOC125488105
subclass of: SO_0000673
so part of: LOC125488105
location: join(3593548..3593652,3594666..3595141,3596188..3598153)
location: region:3593548-3598153:1
so has part: feature:3593548-3593652:1:exon
so has part: feature:3594666-3595141:1:exon
so has part: feature:3596188-3598153:1:exon

position:3593548:1
position: 3593548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3593548-3593652:1:exon

position:3593652:1
position: 3593652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3594666-3595141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3596188-3598153:1:exon

LOC125488105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488105
product: perforin-1-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620970.1
SIO_010081: LOC125488105
subclass of: SO_0000673
so part of: LOC125488105
location: join(3593635..3593652,3594435..3595141,3596188..3598153)
location: region:3593635-3598153:1
so has part: feature:3593635-3593652:1:exon
so has part: feature:3594435-3595141:1:exon
so has part: feature:3596188-3598153:1:exon

position:3593635:1
position: 3593635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3593635-3593652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3594435-3595141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3596188-3598153:1:exon

LOC125488105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perforin-1-like
translation: MAAVHLKPSCFLFLCLFFQDALRACTTGLASECRDANFVPGAQLAGLGYDVVTLQPKGAFVIDVNTWRFANGSCTLCHNEHLGNVRQRLPISLVDWRTLSSCQRSLSSQFYRSADMLAQSATSAITNDWRVDLHLNAANLVLAGSKSKLVSFGTSRSKSDRYSFTSHQFQCRYYQYRVKDKPLLAPEFARSLSSLPPNGKKYQYRKLVATYGTHYVMSVELGGHFKDVTAIRTCETASEGYTIEEVKDCLSIEAGLTAQLRAKASVRNENCQKMARAMKHGDKVYQAFNDRETELTGGKVQQGADLFFSRDSSAFSGWMNSLTSHPGTVRYDLVPLHHMLPMSDPKRKNLQRYISDYIVHNALSKQCRVGATCPHGSYRNPYQPCNCVCREDNQVDRNCCSKQKGLGHLVVTVKEGRDLWGDIFSGTDGYVVVRYDRREARTNVIWNNNNPRWNTKLDLGKVRVSDEHKLTIEVWDEDAIKRNDLLGKCEVRLTSGTHREVCYLRYGKVTYDYTFTCGPHLGGAICQSYVPLPGSMAFTPYVGTTNHTVHLNTVKLNRSEPSFPVVYFP
SIO_010081: LOC125488105
subclass of: SO_0000673
so part of: LOC125488105
location: 3596219..3597928
location: region:3596219-3597928:1
so has part: feature:3596219-3597928:1:exon

XP_048476925.1
type: Protein
SIO_000068: ncbiprotein

position:3596219:1
position: 3596219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3597928:1
position: 3597928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3596219-3597928:1:exon

LOC125488105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perforin-1-like
translation: MAAVHLKPSCFLFLCLFFQDALRACTTGLASECRDANFVPGAQLAGLGYDVVTLQPKGAFVIDVNTWRFANGSCTLCHNEHLGNVRQRLPISLVDWRTLSSCQRSLSSQFYRSADMLAQSATSAITNDWRVDLHLNAANLVLAGSKSKLVSFGTSRSKSDRYSFTSHQFQCRYYQYRVKDKPLLAPEFARSLSSLPPNGKKYQYRKLVATYGTHYVMSVELGGHFKDVTAIRTCETASEGYTIEEVKDCLSIEAGLTAQLRAKASVRNENCQKMARAMKHGDKVYQAFNDRETELTGGKVQQGADLFFSRDSSAFSGWMNSLTSHPGTVRYDLVPLHHMLPMSDPKRKNLQRYISDYIVHNALSKQCRVGATCPHGSYRNPYQPCNCVCREDNQVDRNCCSKQKGLGHLVVTVKEGRDLWGDIFSGTDGYVVVRYDRREARTNVIWNNNNPRWNTKLDLGKVRVSDEHKLTIEVWDEDAIKRNDLLGKCEVRLTSGTHREVCYLRYGKVTYDYTFTCGPHLGGAICQSYVPLPGSMAFTPYVGTTNHTVHLNTVKLNRSEPSFPVVYFP
SIO_010081: LOC125488105
subclass of: SO_0000673
so part of: LOC125488105
location: 3596219..3597928
location: region:3596219-3597928:1
so has part: feature:3596219-3597928:1:exon

XP_048476926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3596219-3597928:1:exon

LOC125488105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perforin-1-like
translation: MAAVHLKPSCFLFLCLFFQDALRACTTGLASECRDANFVPGAQLAGLGYDVVTLQPKGAFVIDVNTWRFANGSCTLCHNEHLGNVRQRLPISLVDWRTLSSCQRSLSSQFYRSADMLAQSATSAITNDWRVDLHLNAANLVLAGSKSKLVSFGTSRSKSDRYSFTSHQFQCRYYQYRVKDKPLLAPEFARSLSSLPPNGKKYQYRKLVATYGTHYVMSVELGGHFKDVTAIRTCETASEGYTIEEVKDCLSIEAGLTAQLRAKASVRNENCQKMARAMKHGDKVYQAFNDRETELTGGKVQQGADLFFSRDSSAFSGWMNSLTSHPGTVRYDLVPLHHMLPMSDPKRKNLQRYISDYIVHNALSKQCRVGATCPHGSYRNPYQPCNCVCREDNQVDRNCCSKQKGLGHLVVTVKEGRDLWGDIFSGTDGYVVVRYDRREARTNVIWNNNNPRWNTKLDLGKVRVSDEHKLTIEVWDEDAIKRNDLLGKCEVRLTSGTHREVCYLRYGKVTYDYTFTCGPHLGGAICQSYVPLPGSMAFTPYVGTTNHTVHLNTVKLNRSEPSFPVVYFP
SIO_010081: LOC125488105
subclass of: SO_0000673
so part of: LOC125488105
location: 3596219..3597928
location: region:3596219-3597928:1
so has part: feature:3596219-3597928:1:exon

XP_048476927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3596219-3597928:1:exon

LOC125488105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perforin-1-like
translation: MAAVHLKPSCFLFLCLFFQDALRACTTGLASECRDANFVPGAQLAGLGYDVVTLQPKGAFVIDVNTWRFANGSCTLCHNEHLGNVRQRLPISLVDWRTLSSCQRSLSSQFYRSADMLAQSATSAITNDWRVDLHLNAANLVLAGSKSKLVSFGTSRSKSDRYSFTSHQFQCRYYQYRVKDKPLLAPEFARSLSSLPPNGKKYQYRKLVATYGTHYVMSVELGGHFKDVTAIRTCETASEGYTIEEVKDCLSIEAGLTAQLRAKASVRNENCQKMARAMKHGDKVYQAFNDRETELTGGKVQQGADLFFSRDSSAFSGWMNSLTSHPGTVRYDLVPLHHMLPMSDPKRKNLQRYISDYIVHNALSKQCRVGATCPHGSYRNPYQPCNCVCREDNQVDRNCCSKQKGLGHLVVTVKEGRDLWGDIFSGTDGYVVVRYDRREARTNVIWNNNNPRWNTKLDLGKVRVSDEHKLTIEVWDEDAIKRNDLLGKCEVRLTSGTHREVCYLRYGKVTYDYTFTCGPHLGGAICQSYVPLPGSMAFTPYVGTTNHTVHLNTVKLNRSEPSFPVVYFP
SIO_010081: LOC125488105
subclass of: SO_0000673
so part of: LOC125488105
location: 3596219..3597928
location: region:3596219-3597928:1
so has part: feature:3596219-3597928:1:exon

XP_048476928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3596219-3597928:1:exon

LOC125488084
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3622483..3625179
location: region:3622483-3625179:1
so has part: feature:3622483-3625179:1:exon

125488084
type: Gene
SIO_000068: ncbigene

position:3622483:1
position: 3622483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3625179:1
position: 3625179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3622483-3625179:1:exon

LOC125488084
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488084
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125488084
subclass of: SO_0000673
so part of: LOC125488084
location: 3622483..3622581
location: region:3622483-3622581:1
so has part: feature:3622483-3622581:1:exon

position:3622581:1
position: 3622581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3622483-3622581:1:exon

LOC125488084
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125488084
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125488084
subclass of: SO_0000673
so part of: LOC125488084
location: 3623835..3625179
location: region:3623835-3625179:1
so has part: feature:3623835-3625179:1:exon

position:3623835:1
position: 3623835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3623835-3625179:1:exon

LOC125488085
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<3711680..3716998)
location: region:3711680-3716998:-1
so has part: feature:3711680-3716998:-1:exon
subclass of: SO_0000010

125488085
type: Gene
SIO_000068: ncbigene

position:3711680:-1
position: 3711680
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:3716998:-1
position: 3716998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3711680-3716998:-1:exon

LOC125488085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488085
product: pseudouridylate synthase RPUSD4, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_048620906.1
SIO_010081: LOC125488085
subclass of: SO_0000673
so part of: LOC125488085
location: complement(join(<3711680..3711700,3712085..3712182,3713546..3713696,3713923..3714016,3714874..3715075,3715218..3715389,3716770..3716998))
location: region:3711680-3716998:-1
so has part: feature:3716770-3716998:-1:exon
so has part: feature:3715218-3715389:-1:exon
so has part: feature:3714874-3715075:-1:exon
so has part: feature:3713923-3714016:-1:exon
so has part: feature:3713546-3713696:-1:exon
so has part: feature:3712085-3712182:-1:exon
so has part: feature:3711680-3711700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3716770-3716998:-1:exon

position:3716770:-1
position: 3716770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3715218-3715389:-1:exon

position:3715218:-1
position: 3715218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3715389:-1
position: 3715389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3714874-3715075:-1:exon

position:3714874:-1
position: 3714874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3715075:-1
position: 3715075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3713923-3714016:-1:exon

position:3713923:-1
position: 3713923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3714016:-1
position: 3714016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3713546-3713696:-1:exon

position:3713546:-1
position: 3713546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3713696:-1
position: 3713696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3712085-3712182:-1:exon

position:3712085:-1
position: 3712085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3712182:-1
position: 3712182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3711680-3711700:-1:exon

position:3711700:-1
position: 3711700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pseudouridylate synthase RPUSD4, mitochondrial-like
translation: MAARAALFGWRLGHRRGLLQREGWGPLPTFGPGIRRSLQSGRERPRPQETASVGHQPSTSSGASSQSVEELRRLSRRLQKVHPNVLAKVLRKSVTTHGQDLLAVDKPFGVPMSAAPGEGPSIEEVLPVLAKMMFGMKAPPLHLCHRLDKDSSGAMLLARDLYTAQAVQHLFRQHRVIKKYWVITVGVPVPPEGVIDIPIIEREVSSPRKHFKMALAPLFRVGDVEGTMLRVRQSRAAHSAVTQYRVMESCGSAALLEVQPLTGVKHQLRVHLALALSCPILGDHKYSKWNSLQPQKLPEGML
SIO_010081: LOC125488085
subclass of: SO_0000673
so part of: LOC125488085
location: complement(join(<3711680..3711700,3712085..3712182,3713546..3713696,3713923..3714016,3714874..3715075,3715218..3715389,3716770..3716937))
location: region:3711680-3716937:-1
so has part: feature:3716770-3716937:-1:exon
so has part: feature:3715218-3715389:-1:exon
so has part: feature:3714874-3715075:-1:exon
so has part: feature:3713923-3714016:-1:exon
so has part: feature:3713546-3713696:-1:exon
so has part: feature:3712085-3712182:-1:exon
so has part: feature:3711680-3711700:-1:exon

XP_048476863.1
type: Protein
SIO_000068: ncbiprotein

position:3716937:-1
position: 3716937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3716770-3716937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3715218-3715389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3714874-3715075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3713923-3714016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3713546-3713696:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3712085-3712182:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3711680-3711700:-1:exon

pus3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pus3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3717899..3721071)
location: region:3717899-3721071:-1
so has part: feature:3717899-3721071:-1:exon
subclass of: SO_0000010

109924813
type: Gene
SIO_000068: ncbigene

position:3717899:-1
position: 3717899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3721071:-1
position: 3721071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3717899-3721071:-1:exon

pus3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pus3
product: pseudouridylate synthase 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620972.1
SIO_010081: pus3
subclass of: SO_0000673
so part of: pus3
location: complement(join(3717899..3718315,3719688..3719878,3720505..3721071))
location: region:3717899-3721071:-1
so has part: feature:3720505-3721071:-1:exon
so has part: feature:3719688-3719878:-1:exon
so has part: feature:3717899-3718315:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3720505-3721071:-1:exon

position:3720505:-1
position: 3720505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3719688-3719878:-1:exon

position:3719688:-1
position: 3719688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3719878:-1
position: 3719878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3717899-3718315:-1:exon

position:3718315:-1
position: 3718315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pus3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pus3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase
translation: MLNRVLPADIRALAWAPVGPDFSARFSCLHRTYHYYFPGAGLALGPMDQAARLFEGTHDFRNLCKMDVANGVTSFRRTVLRARVEVLPGEGQAAPGAGPSAYGMCRFEVRGQAFLYHQVRCMAAVLLLIGQGLEEPGVIAELLDVERNPCKPQYSMAVDYPLVLYDCAYENLEWIVDPDAQSFTVSNLHTMWTQHAIKTRILYSMLQGLGQAPSVEEPGSGRDPLRDGAPLPEATAGQADALTEGVRPRRYKRLLERERCEGLESRIRHYAKRGRIELPGAMREAGEGQEDGYRSEDGATPALRLPPR
SIO_010081: pus3
subclass of: SO_0000673
so part of: pus3
location: complement(join(3718044..3718315,3719688..3719878,3720505..3720968))
location: region:3718044-3720968:-1
so has part: feature:3720505-3720968:-1:exon
so has part: feature:3719688-3719878:-1:exon
so has part: feature:3718044-3718315:-1:exon

XP_048476929.1
type: Protein
SIO_000068: ncbiprotein

position:3718044:-1
position: 3718044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3720968:-1
position: 3720968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3720505-3720968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3719688-3719878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3718044-3718315:-1:exon

rusf1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: rusf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3728375..>3733673)
location: region:3728375-3733673:-1
so has part: feature:3728375-3733673:-1:exon
subclass of: SO_0000010

125488086
type: Gene
SIO_000068: ncbigene

position:3728375:-1
position: 3728375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3733673:-1
position: 3733673
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3728375-3733673:-1:exon

rusf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rusf1
product: RUS family member 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620907.1
SIO_010081: rusf1
subclass of: SO_0000673
so part of: rusf1
location: complement(join(3728375..3728828,3730539..3730712,3731038..3731116,3731808..3731909,3733193..3733298,3733627..>3733673))
location: region:3728375-3733673:-1
so has part: feature:3733627-3733673:-1:exon
so has part: feature:3733193-3733298:-1:exon
so has part: feature:3731808-3731909:-1:exon
so has part: feature:3731038-3731116:-1:exon
so has part: feature:3730539-3730712:-1:exon
so has part: feature:3728375-3728828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3733627-3733673:-1:exon

position:3733627:-1
position: 3733627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3733193-3733298:-1:exon

position:3733193:-1
position: 3733193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3733298:-1
position: 3733298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3731808-3731909:-1:exon

position:3731808:-1
position: 3731808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3731909:-1
position: 3731909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3731038-3731116:-1:exon

position:3731038:-1
position: 3731038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3731116:-1
position: 3731116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3730539-3730712:-1:exon

position:3730539:-1
position: 3730539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3730712:-1
position: 3730712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3728375-3728828:-1:exon

position:3728828:-1
position: 3728828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rusf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rusf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUS1 family protein C16orf58 homolog
translation: LFSLRSTLDCDAKKWRLFADILNDLAIFIEIIAPAFPSFFTLIVCTSGVFKSIVGVSGGATRAALTVHQAQRDNMADVSAKDGSQETLVNLIGLACSLILTPLISDNIVYVGILLKGAVCVSLREGADSVDVIHAAFHAEVLHHLLYGEVHTFSVESSTFTELRRKAVSAQDERLWDVVAATHLLVDQLFPRLLTEARAAGWVTDRNHLGADEWRARWAPGEGKKGQ
SIO_010081: rusf1
subclass of: SO_0000673
so part of: rusf1
location: complement(join(3728653..3728828,3730539..3730712,3731038..3731116,3731808..3731909,3733193..3733298,3733627..>3733673))
location: region:3728653-3733673:-1
so has part: feature:3733627-3733673:-1:exon
so has part: feature:3733193-3733298:-1:exon
so has part: feature:3731808-3731909:-1:exon
so has part: feature:3731038-3731116:-1:exon
so has part: feature:3730539-3730712:-1:exon
so has part: feature:3728653-3728828:-1:exon

XP_048476864.1
type: Protein
SIO_000068: ncbiprotein

position:3728653:-1
position: 3728653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733627-3733673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3733193-3733298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3731808-3731909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3731038-3731116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3730539-3730712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3728653-3728828:-1:exon

LOC109925712
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3734294..3743608)
location: region:3734294-3743608:-1
so has part: feature:3734294-3743608:-1:exon
subclass of: SO_0000010

109925712
type: Gene
SIO_000068: ncbigene

position:3734294:-1
position: 3734294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3743608:-1
position: 3743608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3734294-3743608:-1:exon

LOC109925712
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925712
product: E3 ubiquitin-protein ligase BRE1B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 13 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620908.1
SIO_010081: LOC109925712
subclass of: SO_0000673
so part of: LOC109925712
location: complement(join(3734294..3734732,3734859..3734976,3735889..3736412,3736692..3736813,3737299..3737434,3739497..3739676,3740457..3740576,3742996..3743070,3743290..3743436,3743519..3743608))
location: region:3734294-3743608:-1
so has part: feature:3743519-3743608:-1:exon
so has part: feature:3743290-3743436:-1:exon
so has part: feature:3742996-3743070:-1:exon
so has part: feature:3740457-3740576:-1:exon
so has part: feature:3739497-3739676:-1:exon
so has part: feature:3737299-3737434:-1:exon
so has part: feature:3736692-3736813:-1:exon
so has part: feature:3735889-3736412:-1:exon
so has part: feature:3734859-3734976:-1:exon
so has part: feature:3734294-3734732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3743519-3743608:-1:exon

position:3743519:-1
position: 3743519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3743290-3743436:-1:exon

position:3743290:-1
position: 3743290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3743436:-1
position: 3743436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3742996-3743070:-1:exon

position:3742996:-1
position: 3742996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3743070:-1
position: 3743070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3740457-3740576:-1:exon

position:3740457:-1
position: 3740457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3740576:-1
position: 3740576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3739497-3739676:-1:exon

position:3739497:-1
position: 3739497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3739676:-1
position: 3739676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3737299-3737434:-1:exon

position:3737299:-1
position: 3737299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3737434:-1
position: 3737434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3736692-3736813:-1:exon

position:3736692:-1
position: 3736692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3736813:-1
position: 3736813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3735889-3736412:-1:exon

position:3735889:-1
position: 3735889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3736412:-1
position: 3736412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3734859-3734976:-1:exon

position:3734859:-1
position: 3734859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3734976:-1
position: 3734976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3734294-3734732:-1:exon

position:3734732:-1
position: 3734732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109925712
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase BRE1B-like
translation: MDKLGRRASFRAVDLCVRAGRVQGTDYRDVYNELQDKVQSAETKVSEMETTIEDLQWDIEKLRKREQKLNRHLAEALEQLNSGYHVSGGPAGFQGGQITLNIHKFEMLSAELEENRELANSRMAELEKLEQELQEAVRQNEKLKVDMRNIPEEVVKETPEYKCLQSQFSLLYNESLQVKTQLDEARALLLTTKNTHLRQIEHMESDELNLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLINSLQNHNHQLKGDVQRYKRKLREAQTEINKARVQCYPSPAPSSSSGSPAMSTTYTATANAGSSTSTTTAVSVEEIKEEEGTEVKKEAKECPSAAPPAVTVKKEKEEKEQAESKEEEPPPPVRRDPDKPKTKERERDREPERERERERDRDRERDRDRDKDRERERERDRDRDRDRDRDKDKDKSKTDDSKKKDSDVLKQLKVELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAEKKAKAEVEEVKLKIKDMEDKEKRESKKLADEDAVKKIKFAEEQIEHLQKKLAATKQVGRGRWGPIGLGPVKGPQGHLWPHCPHACASSCPFPGVSRVARPSSRSASLFYVFCFVC
SIO_010081: LOC109925712
subclass of: SO_0000673
so part of: LOC109925712
location: complement(join(3734403..3734732,3734859..3734976,3735889..3736412,3736692..3736813,3737299..3737434,3739497..3739676,3740457..3740576,3742996..3743070,3743290..3743436,3743519..3743608))
location: region:3734403-3743608:-1
so has part: feature:3743519-3743608:-1:exon
so has part: feature:3743290-3743436:-1:exon
so has part: feature:3742996-3743070:-1:exon
so has part: feature:3740457-3740576:-1:exon
so has part: feature:3739497-3739676:-1:exon
so has part: feature:3737299-3737434:-1:exon
so has part: feature:3736692-3736813:-1:exon
so has part: feature:3735889-3736412:-1:exon
so has part: feature:3734859-3734976:-1:exon
so has part: feature:3734403-3734732:-1:exon

XP_048476865.1
type: Protein
SIO_000068: ncbiprotein

position:3734403:-1
position: 3734403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3743519-3743608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3743290-3743436:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3742996-3743070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3740457-3740576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3739497-3739676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3737299-3737434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3736692-3736813:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3735889-3736412:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3734859-3734976:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3734403-3734732:-1:exon

mapk7
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mapk7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3754159..3762700
location: region:3754159-3762700:1
so has part: feature:3754159-3762700:1:exon
subclass of: SO_0000010

109925206
type: Gene
SIO_000068: ncbigene

position:3754159:1
position: 3754159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762700:1
position: 3762700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3754159-3762700:1:exon

mapk7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mapk7
product: mitogen-activated protein kinase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 87 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620926.1
SIO_010081: mapk7
subclass of: SO_0000673
so part of: mapk7
location: join(3754159..3754351,3755061..3755247,3756284..3757199,3757285..3757387,3759409..3760607,3761446..3761573,3762350..3762700)
location: region:3754159-3762700:1
so has part: feature:3754159-3754351:1:exon
so has part: feature:3755061-3755247:1:exon
so has part: feature:3756284-3757199:1:exon
so has part: feature:3757285-3757387:1:exon
so has part: feature:3759409-3760607:1:exon
so has part: feature:3761446-3761573:1:exon
so has part: feature:3762350-3762700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3754159-3754351:1:exon

position:3754351:1
position: 3754351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3755061-3755247:1:exon

position:3755061:1
position: 3755061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755247:1
position: 3755247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3756284-3757199:1:exon

position:3756284:1
position: 3756284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3757199:1
position: 3757199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3757285-3757387:1:exon

position:3757285:1
position: 3757285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3757387:1
position: 3757387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3759409-3760607:1:exon

position:3759409:1
position: 3759409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3760607:1
position: 3760607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3761446-3761573:1:exon

position:3761446:1
position: 3761446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3761573:1
position: 3761573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3762350-3762700:1:exon

position:3762350:1
position: 3762350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mapk7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mapk7
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:3755228..3755230,aa:OTHER)
product: LOW QUALITY PROTEIN: mitogen-activated protein kinase 7
translation: MEAIRSCAATARNLAFLKARSMDVTFDVGDEYEIIETIGTGAYGVVSSARHKHTGHQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILKPPGSYADFKSVXVAAHSLESDLHQIIHSSQPLSLEHARYFLYQLLRGLKYVHSANVVHRDLKPSNLLVNENCELKIGDFGMARGLGTGPGQPEPFLTEYVATRWYRAPELMLSLDGYSSAIDLWSAGCILAEMLGRRQIFPGKNYLDQLQLILTVLGTPPERLVASVGSERVRSYLRGLPARRPVPLPSLYPGQDPQALELLEQLLSFDPQRRPSASLALGHPFLAKYHDPQDEPVCCPPFDFSFDRPAPGREQLKEAIAWEIHDFHWRREGIRRGICRSRPPPPRPPPPPPPPPPPPPPPPPPRPAPGVDMGPGPGPWGGGAAPPTDARKECGISADTKAALKAALIKSALRQKQKETAGCGLEHPEARRSVTAQERQREREEKRRRRQERAKQRERKQRERERKELKEGDVLGGVVLSQGDKSLLQRWMRMTEGRQRPEAGDGAAPALNGGLDGPAAGAKPAAGLGPTPGLGPNPSLRPGVGLGPAPELRPGVGLGPTPELRPSMGLGPTPELRPGVGLGPTPELRPGVGLGPTPELRPGMGLGPTPELRPGVALGPAAELRPGVALGPTPELGPSVGLRPSVGFGPAPSLGPNVGFGAGPGLDPGLAPGPAPSLAFGAAPGLGFRPSLGFEQATVLQPGGGAPDGPGVGLEAGPAFPGPGQAWGSGQQRPPTLLYPPGLCEVPWGQGGELPHAAGFGELGLREVSPQPPAHYPQEEQQAPCPGPQPHLALPPTNASNTESPDINTVTQQLSKSQVKDLLPPGFSVTPKGSGAGYGLGFDLEEFLNQSFDMQGDNHESQGDSAPLSASLLADWLEVHRMNPAEMESLQQELQLGSPMILSDGHDL
SIO_010081: mapk7
subclass of: SO_0000673
so part of: mapk7
location: join(3754189..3754351,3755061..3755247,3756284..3757199,3757285..3757387,3759409..3760607,3761446..3761573,3762350..3762494)
location: region:3754189-3762494:1
so has part: feature:3754189-3754351:1:exon
so has part: feature:3755061-3755247:1:exon
so has part: feature:3756284-3757199:1:exon
so has part: feature:3757285-3757387:1:exon
so has part: feature:3759409-3760607:1:exon
so has part: feature:3761446-3761573:1:exon
so has part: feature:3762350-3762494:1:exon

XP_048476883.1
type: Protein
SIO_000068: ncbiprotein

position:3754189:1
position: 3754189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762494:1
position: 3762494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3754189-3754351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3755061-3755247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3756284-3757199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3757285-3757387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3759409-3760607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761446-3761573:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3762350-3762494:1:exon

LOC109924447
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<3763213..3800535)
location: region:3763213-3800535:-1
so has part: feature:3763213-3800535:-1:exon
subclass of: SO_0000010

109924447
type: Gene
SIO_000068: ncbigene

position:3763213:-1
position: 3763213
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:3800535:-1
position: 3800535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3763213-3800535:-1:exon

LOC109924447
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924447
product: Snf2-related CREBBP activator protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048620925.1
SIO_010081: LOC109924447
subclass of: SO_0000673
so part of: LOC109924447
location: complement(join(<3763213..3764796,3765473..3765556,3765756..3765941,3766646..3766789,3767021..3767135,3767793..3767989,3768391..3768560,3769297..3769499,3769874..3770202,3770297..3770505,3772192..3772434,3773299..3773505,3773647..3773817,3774161..3774511,3774985..3775187,3775290..3775459,3776022..3776208,3778854..3778990,3779996..3780188,3780781..3780950,3781669..3781805,3782343..3782520,3782971..3783200,3783386..3783556,3783773..3783862,3784295..3784376,3788380..3788651,3790558..3790786,3792249..3792389,3793430..3793615,3794061..3794330,3798685..3798923,3800470..3800535))
location: region:3763213-3800535:-1
so has part: feature:3800470-3800535:-1:exon
so has part: feature:3798685-3798923:-1:exon
so has part: feature:3794061-3794330:-1:exon
so has part: feature:3793430-3793615:-1:exon
so has part: feature:3792249-3792389:-1:exon
so has part: feature:3790558-3790786:-1:exon
so has part: feature:3788380-3788651:-1:exon
so has part: feature:3784295-3784376:-1:exon
so has part: feature:3783773-3783862:-1:exon
so has part: feature:3783386-3783556:-1:exon
so has part: feature:3782971-3783200:-1:exon
so has part: feature:3782343-3782520:-1:exon
so has part: feature:3781669-3781805:-1:exon
so has part: feature:3780781-3780950:-1:exon
so has part: feature:3779996-3780188:-1:exon
so has part: feature:3778854-3778990:-1:exon
so has part: feature:3776022-3776208:-1:exon
so has part: feature:3775290-3775459:-1:exon
so has part: feature:3774985-3775187:-1:exon
so has part: feature:3774161-3774511:-1:exon
so has part: feature:3773647-3773817:-1:exon
so has part: feature:3773299-3773505:-1:exon
so has part: feature:3772192-3772434:-1:exon
so has part: feature:3770297-3770505:-1:exon
so has part: feature:3769874-3770202:-1:exon
so has part: feature:3769297-3769499:-1:exon
so has part: feature:3768391-3768560:-1:exon
so has part: feature:3767793-3767989:-1:exon
so has part: feature:3767021-3767135:-1:exon
so has part: feature:3766646-3766789:-1:exon
so has part: feature:3765756-3765941:-1:exon
so has part: feature:3765473-3765556:-1:exon
so has part: feature:3763213-3764796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3800470-3800535:-1:exon

position:3800470:-1
position: 3800470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3798685-3798923:-1:exon

position:3798685:-1
position: 3798685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3798923:-1
position: 3798923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3794061-3794330:-1:exon

position:3794061:-1
position: 3794061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3794330:-1
position: 3794330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3793430-3793615:-1:exon

position:3793430:-1
position: 3793430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3793615:-1
position: 3793615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3792249-3792389:-1:exon

position:3792249:-1
position: 3792249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3792389:-1
position: 3792389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3790558-3790786:-1:exon

position:3790558:-1
position: 3790558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3790786:-1
position: 3790786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3788380-3788651:-1:exon

position:3788380:-1
position: 3788380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3788651:-1
position: 3788651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3784295-3784376:-1:exon

position:3784295:-1
position: 3784295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3784376:-1
position: 3784376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3783773-3783862:-1:exon

position:3783773:-1
position: 3783773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3783862:-1
position: 3783862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3783386-3783556:-1:exon

position:3783386:-1
position: 3783386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3783556:-1
position: 3783556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3782971-3783200:-1:exon

position:3782971:-1
position: 3782971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3783200:-1
position: 3783200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3782343-3782520:-1:exon

position:3782343:-1
position: 3782343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3782520:-1
position: 3782520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3781669-3781805:-1:exon

position:3781669:-1
position: 3781669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3781805:-1
position: 3781805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3780781-3780950:-1:exon

position:3780781:-1
position: 3780781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780950:-1
position: 3780950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3779996-3780188:-1:exon

position:3779996:-1
position: 3779996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780188:-1
position: 3780188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3778854-3778990:-1:exon

position:3778854:-1
position: 3778854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3778990:-1
position: 3778990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3776022-3776208:-1:exon

position:3776022:-1
position: 3776022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3776208:-1
position: 3776208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3775290-3775459:-1:exon

position:3775290:-1
position: 3775290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3775459:-1
position: 3775459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3774985-3775187:-1:exon

position:3774985:-1
position: 3774985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3775187:-1
position: 3775187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3774161-3774511:-1:exon

position:3774161:-1
position: 3774161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3774511:-1
position: 3774511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3773647-3773817:-1:exon

position:3773647:-1
position: 3773647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3773817:-1
position: 3773817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3773299-3773505:-1:exon

position:3773299:-1
position: 3773299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3773505:-1
position: 3773505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3772192-3772434:-1:exon

position:3772192:-1
position: 3772192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772434:-1
position: 3772434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3770297-3770505:-1:exon

position:3770297:-1
position: 3770297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3770505:-1
position: 3770505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3769874-3770202:-1:exon

position:3769874:-1
position: 3769874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3770202:-1
position: 3770202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3769297-3769499:-1:exon

position:3769297:-1
position: 3769297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3769499:-1
position: 3769499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3768391-3768560:-1:exon

position:3768391:-1
position: 3768391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3768560:-1
position: 3768560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3767793-3767989:-1:exon

position:3767793:-1
position: 3767793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3767989:-1
position: 3767989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3767021-3767135:-1:exon

position:3767021:-1
position: 3767021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3767135:-1
position: 3767135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3766646-3766789:-1:exon

position:3766646:-1
position: 3766646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3766789:-1
position: 3766789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3765756-3765941:-1:exon

position:3765756:-1
position: 3765756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3765941:-1
position: 3765941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3765473-3765556:-1:exon

position:3765473:-1
position: 3765473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3765556:-1
position: 3765556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3763213-3764796:-1:exon

position:3764796:-1
position: 3764796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109924447
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase SRCAP
translation: MQTNSPLHYNTHHNQIAHSKERMTGSSPVSPASSPASSAGGSPAHVGSLTNDSLDGPATFASPKLQPPEELACGLWVPDLGPCNQPVKGQAWDKAHAEIAEQAKHEAKIEHRIAELRREGLWSLKRLNRVQEAARPKSHWDYLCEEMQWLSADFTQERRWKRGVARKVARTVLRFHEEQRQKEERAKRDEQVKLRRIASSIAKDVKQFWTNVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLLSQSLNESLPASKPGSSQLGSSLAGSAASTPPISGSATEDEDFQPHEEEDDEETIEVEEKQAGNDDETRRREIELLRRESELPLDELLRSLPAGLAEQEGIGGEEEEGEEEEESSGSESSEDPPPRPRRVLQNAHRFPTRGKHRRGEPEDEEFTADEDEAEDEEETIEMEEALEGEVDHKAELDDLAKESEMPVEDLLKKYSGAFSDSFETPDSDSNDSSDSEEEEEEGDETTTEYEEEEESSSSTDSENSSVTDEEDEEEEEEDNTDEDIGVEYLIQGEDGDDEGNQDLVPGEARGPKKEITDIAAAAESLQPKGYTLATTQVKTPVPSLLRGTLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIALLAHLAIEKCNWGPHLIIVPTSVMLNWEMEFKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWKYMILDEAQNIKNFKSQRWQSLLNFNSQHRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNENLVKRLHKVLRPFLLRRIKLDVEKQMPKKYEHVVQCRLSKRQRYLYDDFMSQASTKETLETGHFMSVINILMQLRKVCNHPNLFDPRPIHSPFITQGICYTTASCVERALEYEPFKQVDLSIFDLINIEGRLSRYESEVFLPKHKVTKKLIEEIAEAPDPPPRPKPVRMKVNRMLQPNQKPDGRTVLLVNSPRPPAPGVQPALQRPSGGGVAELLHTVQGGTASLQTVVSPVSQTVIPSQGLSTTPLSLPLGTAGPPRTILAHARPSTPSPHLTLPVNAARPFPLSALRVTPTVQQQPGTAGYAVQAAASIPAHPPPPPPPPPPPPPPPPPAAPLPSPPVGLPQRFVLSPDVQARLPTGEVVSIGQLASLTNRQSGHPVSPGSKPVTFQIQGNKLTLAGAQVRQVAVGQPRQLQGNMVHLVSTGGHHIIGQPAQLALMQAMAQQNAHPTMGIQTPLQTVTGAQSTISTAATSPGLAVPVAAAQVPASVVTTSSVVKIVVRQAPKEGFPLAVHSPRPLAVSAARFPATVVTPGRVQLPVGALTLSTAAPRPVLRVLHTPAVNTEPAAPTVTRLVVTGPNVAEKEDSELPTLRPVIARPAAAPAPAPVEPVTSSTSLAALRPRRHQAPPTKSPFKLEALEQKRRQHRQERLERIVTVNERRCAASPVYGSELLRLCAFVERARAVGVDSPPEGTGWRGLGYAHCLAAQVSREARQPEAYWRSTRALDGAVHNPEERIEELADIIDRFIFVIPPVEAPAVQMHMSHPHPSSLHQQFLLADALHRELSPRTTRLHRTICNMRTQFPDLRLIQYDCGKLQVLDALLRQLKVGGHRVLLFTQMTRMLDILEQFLNFHGHIYLRLDGSTKVEQRQILMDRFNADKRIFCFILSTRSGGVGVNLTGADTVLFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISDRTVEENILKKANQKRMLGDLAIEGGNFTTAFFKEQTIRELFDLPTEEPKKELVPLTLPVPAPAPSQPEEEDSMSAKQTLILEQALCRAEDEEDIRAASQAKAEQVAELAEFNENIPLDGEDSSTRDEEEELSKAEQEIAALVEQLTPIERYAMNYLEASLEAVSKEELKQAEEQVEAARKDLDQAKDEVWKWTEDDESQLNEELRLKRQKKARHPAKAQSERVGTRTSERLRGARKAQLPREPSPPKPVVCGPLSYEAPVPARDLQIHISAE…
SIO_010081: LOC109924447
subclass of: SO_0000673
so part of: LOC109924447
location: complement(join(<3763213..3764796,3765473..3765556,3765756..3765941,3766646..3766789,3767021..3767135,3767793..3767989,3768391..3768560,3769297..3769499,3769874..3770202,3770297..3770505,3772192..3772434,3773299..3773505,3773647..3773817,3774161..3774511,3774985..3775187,3775290..3775459,3776022..3776208,3778854..3778990,3779996..3780188,3780781..3780950,3781669..3781805,3782343..3782520,3782971..3783200,3783386..3783556,3783773..3783862,3784295..3784376,3788380..3788651,3790558..3790786,3792249..3792389,3793430..3793615,3794061..3794330,3798685..3798729))
location: region:3763213-3798729:-1
so has part: feature:3798685-3798729:-1:exon
so has part: feature:3794061-3794330:-1:exon
so has part: feature:3793430-3793615:-1:exon
so has part: feature:3792249-3792389:-1:exon
so has part: feature:3790558-3790786:-1:exon
so has part: feature:3788380-3788651:-1:exon
so has part: feature:3784295-3784376:-1:exon
so has part: feature:3783773-3783862:-1:exon
so has part: feature:3783386-3783556:-1:exon
so has part: feature:3782971-3783200:-1:exon
so has part: feature:3782343-3782520:-1:exon
so has part: feature:3781669-3781805:-1:exon
so has part: feature:3780781-3780950:-1:exon
so has part: feature:3779996-3780188:-1:exon
so has part: feature:3778854-3778990:-1:exon
so has part: feature:3776022-3776208:-1:exon
so has part: feature:3775290-3775459:-1:exon
so has part: feature:3774985-3775187:-1:exon
so has part: feature:3774161-3774511:-1:exon
so has part: feature:3773647-3773817:-1:exon
so has part: feature:3773299-3773505:-1:exon
so has part: feature:3772192-3772434:-1:exon
so has part: feature:3770297-3770505:-1:exon
so has part: feature:3769874-3770202:-1:exon
so has part: feature:3769297-3769499:-1:exon
so has part: feature:3768391-3768560:-1:exon
so has part: feature:3767793-3767989:-1:exon
so has part: feature:3767021-3767135:-1:exon
so has part: feature:3766646-3766789:-1:exon
so has part: feature:3765756-3765941:-1:exon
so has part: feature:3765473-3765556:-1:exon
so has part: feature:3763213-3764796:-1:exon

XP_048476882.1
type: Protein
SIO_000068: ncbiprotein

position:3798729:-1
position: 3798729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3798685-3798729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3794061-3794330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3793430-3793615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3792249-3792389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3790558-3790786:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3788380-3788651:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3784295-3784376:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3783773-3783862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3783386-3783556:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3782971-3783200:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3782343-3782520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3781669-3781805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3780781-3780950:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3779996-3780188:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3778854-3778990:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3776022-3776208:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3775290-3775459:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3774985-3775187:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3774161-3774511:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3773647-3773817:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3773299-3773505:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3772192-3772434:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3770297-3770505:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3769874-3770202:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3769297-3769499:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3768391-3768560:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3767793-3767989:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3767021-3767135:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3766646-3766789:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3765756-3765941:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3765473-3765556:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3763213-3764796:-1:exon

LOC125488093
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3819332..3838154
location: region:3819332-3838154:1
so has part: feature:3819332-3838154:1:exon
subclass of: SO_0000011

125488093
type: Gene
SIO_000068: ncbigene

position:3819332:1
position: 3819332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3838154:1
position: 3838154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3819332-3838154:1:exon

LOC125488093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125488093
product: uncharacterized LOC125488093
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007266210.1
SIO_010081: LOC125488093
subclass of: SO_0000673
so part of: LOC125488093
location: join(3819332..3819346,3819585..3819798,3820553..3820630,3837006..3838154)
location: region:3819332-3838154:1
so has part: feature:3819332-3819346:1:exon
so has part: feature:3819585-3819798:1:exon
so has part: feature:3820553-3820630:1:exon
so has part: feature:3837006-3838154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3819332-3819346:1:exon

position:3819346:1
position: 3819346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3819585-3819798:1:exon

position:3819585:1
position: 3819585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3819798:1
position: 3819798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3820553-3820630:1:exon

position:3820553:1
position: 3820553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3820630:1
position: 3820630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3837006-3838154:1:exon

position:3837006:1
position: 3837006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926607
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3838207..3855601)
location: region:3838207-3855601:-1
so has part: feature:3838207-3855601:-1:exon
subclass of: SO_0000010

109926607
type: Gene
SIO_000068: ncbigene

position:3838207:-1
position: 3838207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3855601:-1
position: 3855601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838207-3855601:-1:exon

LOC109926607
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926607
product: autism susceptibility gene 2 protein homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620909.1
SIO_010081: LOC109926607
subclass of: SO_0000673
so part of: LOC109926607
location: complement(join(3838207..3838248,3839260..3840437,3841289..3841511,3842055..3842138,3842824..3842901,3843380..3843512,3847851..3847922,3848495..3848524,3848681..3848749,3850486..3850581,3851081..3851295,3852784..3853123,3853948..3854309,3854664..3854735,3855496..3855601))
location: region:3838207-3855601:-1
so has part: feature:3855496-3855601:-1:exon
so has part: feature:3854664-3854735:-1:exon
so has part: feature:3853948-3854309:-1:exon
so has part: feature:3852784-3853123:-1:exon
so has part: feature:3851081-3851295:-1:exon
so has part: feature:3850486-3850581:-1:exon
so has part: feature:3848681-3848749:-1:exon
so has part: feature:3848495-3848524:-1:exon
so has part: feature:3847851-3847922:-1:exon
so has part: feature:3843380-3843512:-1:exon
so has part: feature:3842824-3842901:-1:exon
so has part: feature:3842055-3842138:-1:exon
so has part: feature:3841289-3841511:-1:exon
so has part: feature:3839260-3840437:-1:exon
so has part: feature:3838207-3838248:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3855496-3855601:-1:exon

position:3855496:-1
position: 3855496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3854664-3854735:-1:exon

position:3854664:-1
position: 3854664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3854735:-1
position: 3854735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3853948-3854309:-1:exon

position:3853948:-1
position: 3853948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3854309:-1
position: 3854309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3852784-3853123:-1:exon

position:3852784:-1
position: 3852784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3853123:-1
position: 3853123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3851081-3851295:-1:exon

position:3851081:-1
position: 3851081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3851295:-1
position: 3851295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3850486-3850581:-1:exon

position:3850486:-1
position: 3850486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3850581:-1
position: 3850581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3848681-3848749:-1:exon

position:3848681:-1
position: 3848681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3848749:-1
position: 3848749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3848495-3848524:-1:exon

position:3848495:-1
position: 3848495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3848524:-1
position: 3848524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3847851-3847922:-1:exon

position:3847851:-1
position: 3847851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3847922:-1
position: 3847922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3843380-3843512:-1:exon

position:3843380:-1
position: 3843380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3843512:-1
position: 3843512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3842824-3842901:-1:exon

position:3842824:-1
position: 3842824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3842901:-1
position: 3842901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3842055-3842138:-1:exon

position:3842055:-1
position: 3842055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3842138:-1
position: 3842138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3841289-3841511:-1:exon

position:3841289:-1
position: 3841289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3841511:-1
position: 3841511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3839260-3840437:-1:exon

position:3839260:-1
position: 3839260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3840437:-1
position: 3840437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3838207-3838248:-1:exon

position:3838248:-1
position: 3838248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926607
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926607
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: autism susceptibility gene 2 protein homolog
translation: MLVMAEAMTRWRTAERPGPAHDHEEKEERRQQRAAAPLSCSQATSDDGLSNLFTTATKIASDLNGAASPQSESKVSGLERSQERNQSSDKDPLLVPSLASKPVPQAASGSQPQAEPVTPVPPHHPHQQLPMPTPAYSQPHRQAAAQLSPQPKGQAPVQTLQQTQPKAQSYSQHQLVYLSSSQSSTPSKLVAPASQLPHRASTPSKLVAPASQLPHRASTPSSLGQGLSGQPAGAHGFVPALRPASHPHPHPHPHPSMFTPSPGLPPPPPLTPGMLQVAGHPSTAAVAAAAALSEQELIRQELNTRYLSSQGPERSASLGPPSFQFHQHQHTHQHTHQHFAPYSAIPQPGLVPAPAPSLVRNSRRNYFQAYHAPVAGIPPVLPPAGPFSSLQGAFQPKTPNPELTSRSGPVTHTFLQKDPRLTETYRPAIRKPGKWCAMHVQIAWMIFRHQEKNKVIHTDHHKLDFTKSELLTRNPGSIFGPIANSHEVARPATLFTAADAVHAASSPFAPPSNLNTFLNPPSHLDPYSRTPSYSTIGQLANGAFGGLGNPAVAAGTVFAHKESPGSQAFASPREHWNRVHQTPPSFPTPPPTWPRLGAGELERSSLLEKELESDKHEVPYIKEEMVREAVYGRHSARLSPAAPLKMAGAAARVGEVEPDDEPARAVPRTTAGSRERERAEPPRDHFKQERRARDPSEETPRLTARRPGEDVAAIRDPSPFSRPSPGAGPPPLLLLLFLQRQRHPLFLGSGGGQAQPPAGTGQEARGQSQSRTAPVADSPSEPVGFEPSTQLPPRSHVPGSLHPVPLALLGQLGGVLERSRVLHGPFLGVGAAPGPERLAPYAWEPYRDPWREGCRPPELDVVPQAPAGSRFYEAESRPYRERAALRDYGPGALLAGAGRREPQSAPAGTAAAPPGLLQEYEQRAQLLGLLTPPPHHHHHHHHHHHHPPSAASGPPPPPHPHPPPPNAAPHPYPRLSPSLVHQGALLSKTPPIAGLGAPPPLISSSARPGTPPHRVTPLSKEGTICFQREETL
SIO_010081: LOC109926607
subclass of: SO_0000673
so part of: LOC109926607
location: complement(join(3838207..3838248,3839260..3840437,3841289..3841511,3842055..3842138,3842824..3842901,3843380..3843512,3847851..3847922,3848495..3848524,3848681..3848749,3850486..3850581,3851081..3851295,3852784..3853123,3853948..3854309,3854664..3854735,3855496..3855601))
location: region:3838207-3855601:-1
so has part: feature:3855496-3855601:-1:exon
so has part: feature:3854664-3854735:-1:exon
so has part: feature:3853948-3854309:-1:exon
so has part: feature:3852784-3853123:-1:exon
so has part: feature:3851081-3851295:-1:exon
so has part: feature:3850486-3850581:-1:exon
so has part: feature:3848681-3848749:-1:exon
so has part: feature:3848495-3848524:-1:exon
so has part: feature:3847851-3847922:-1:exon
so has part: feature:3843380-3843512:-1:exon
so has part: feature:3842824-3842901:-1:exon
so has part: feature:3842055-3842138:-1:exon
so has part: feature:3841289-3841511:-1:exon
so has part: feature:3839260-3840437:-1:exon
so has part: feature:3838207-3838248:-1:exon

XP_048476866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3855496-3855601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3854664-3854735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3853948-3854309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3852784-3853123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3851081-3851295:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3850486-3850581:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3848681-3848749:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3848495-3848524:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3847851-3847922:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3843380-3843512:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3842824-3842901:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3842055-3842138:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3841289-3841511:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3839260-3840437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3838207-3838248:-1:exon

LOC109938585
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109938585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3856205..3866984
location: region:3856205-3866984:1
so has part: feature:3856205-3866984:1:exon
subclass of: SO_0000010

109938585
type: Gene
SIO_000068: ncbigene

position:3856205:1
position: 3856205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3866984:1
position: 3866984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3856205-3866984:1:exon

LOC109938585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109938585
product: phosphorylase b kinase gamma catalytic chain, liver/testis isoform-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048620921.1
SIO_010081: LOC109938585
subclass of: SO_0000673
so part of: LOC109938585
location: join(3856205..3857907,3863217..3863343,3864989..3865164,3865581..3865635,3865831..3865896,3866518..3866681,3866890..3866984)
location: region:3856205-3866984:1
so has part: feature:3856205-3857907:1:exon
so has part: feature:3863217-3863343:1:exon
so has part: feature:3864989-3865164:1:exon
so has part: feature:3865581-3865635:1:exon
so has part: feature:3865831-3865896:1:exon
so has part: feature:3866518-3866681:1:exon
so has part: feature:3866890-3866984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3856205-3857907:1:exon

position:3857907:1
position: 3857907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3863217-3863343:1:exon

position:3863217:1
position: 3863217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3863343:1
position: 3863343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3864989-3865164:1:exon

position:3864989:1
position: 3864989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3865164:1
position: 3865164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3865581-3865635:1:exon

position:3865581:1
position: 3865581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3865635:1
position: 3865635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3865831-3865896:1:exon

position:3865831:1
position: 3865831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3865896:1
position: 3865896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3866518-3866681:1:exon

position:3866518:1
position: 3866518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3866681:1
position: 3866681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3866890-3866984:1:exon

position:3866890:1
position: 3866890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109938585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109938585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphorylase b kinase gamma catalytic chain, liver/testis isoform-like
translation: MFTDARLPQNTLRPIRLLPGNELSPTQRWEAELDKMEPLLHKESVSVSSFSPFSRDSSQENMTRDLRQEEEVAASGFYQKYNPKEVIGRGVSSVVQRCIHKRTDMEYAVKIIEVTDESMSPDQLDEVRRSTQKEIEILQVVSGHPNIITLIDYYTSETVTFLVFDLMKRGELFDYLTHKVVLSEKETRNVMRELLEAIDYLHSRDIVHRDVKTENILLDEQAHIRLSDFGFACHLGPGEKLRELCGTPGYLAPELLTCSMDETHPGYGKEVDV
SIO_010081: LOC109938585
subclass of: SO_0000673
so part of: LOC109938585
location: join(3857769..3857907,3863217..3863343,3864989..3865164,3865581..3865635,3865831..3865896,3866518..3866681,3866890..3866984)
location: region:3857769-3866984:1
so has part: feature:3857769-3857907:1:exon
so has part: feature:3863217-3863343:1:exon
so has part: feature:3864989-3865164:1:exon
so has part: feature:3865581-3865635:1:exon
so has part: feature:3865831-3865896:1:exon
so has part: feature:3866518-3866681:1:exon
so has part: feature:3866890-3866984:1:exon

XP_048476878.1
type: Protein
SIO_000068: ncbiprotein

position:3857769:1
position: 3857769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3857769-3857907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3863217-3863343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3864989-3865164:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3865581-3865635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3865831-3865896:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3866518-3866681:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3866890-3866984:1:exon

LOC109926221
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3870105..3887527)
location: region:3870105-3887527:-1
so has part: feature:3870105-3887527:-1:exon
subclass of: SO_0000010

109926221
type: Gene
SIO_000068: ncbigene

position:3870105:-1
position: 3870105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3887527:-1
position: 3887527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3870105-3887527:-1:exon

LOC109926221
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926221
product: F-box/LRR-repeat protein 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, 16 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620910.1
SIO_010081: LOC109926221
subclass of: SO_0000673
so part of: LOC109926221
location: complement(join(3870105..3870109,3870736..3870954,3871749..3871910,3872496..3872659,3880970..3881745,3882053..3882220,3883278..3883364,3883484..3883627,3883949..3884149,3887206..3887527))
location: region:3870105-3887527:-1
so has part: feature:3887206-3887527:-1:exon
so has part: feature:3883949-3884149:-1:exon
so has part: feature:3883484-3883627:-1:exon
so has part: feature:3883278-3883364:-1:exon
so has part: feature:3882053-3882220:-1:exon
so has part: feature:3880970-3881745:-1:exon
so has part: feature:3872496-3872659:-1:exon
so has part: feature:3871749-3871910:-1:exon
so has part: feature:3870736-3870954:-1:exon
so has part: feature:3870105-3870109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3887206-3887527:-1:exon

position:3887206:-1
position: 3887206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3883949-3884149:-1:exon

position:3883949:-1
position: 3883949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3884149:-1
position: 3884149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3883484-3883627:-1:exon

position:3883484:-1
position: 3883484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3883627:-1
position: 3883627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3883278-3883364:-1:exon

position:3883278:-1
position: 3883278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3883364:-1
position: 3883364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3882053-3882220:-1:exon

position:3882053:-1
position: 3882053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3882220:-1
position: 3882220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3880970-3881745:-1:exon

position:3880970:-1
position: 3880970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3881745:-1
position: 3881745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3872496-3872659:-1:exon

position:3872496:-1
position: 3872496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3872659:-1
position: 3872659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3871749-3871910:-1:exon

position:3871749:-1
position: 3871749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3871910:-1
position: 3871910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3870736-3870954:-1:exon

position:3870736:-1
position: 3870736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3870954:-1
position: 3870954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3870105-3870109:-1:exon

position:3870109:-1
position: 3870109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein 19
translation: MALSPEDEDEQESGPPAPPPAAGPGGGGQAKGKAKPKAPMSSSKAASGARRRRTRCRKCDACQKTECGECHFCKDMKKFGGPGRMKQSCMLRQCTAPVLPHTAVCLMCGDAGKEESVEGEAEKFKLSLMECTICNEIVHPGCLKVCAADGVINDEIPNCWECPKCQLEGKTGKEGKEQLEVSGKRRSDGEEGPRWKLEEGGRARPEDYAAGRKKRKEKDGVLEAGPKKKRLKNTRGPEGTALSTERTHQREKLEHFKRMCQMLERVNPAQSSSSSSSSDSDSDSQGSEEEEEEEGAEEEEEESSDGGGGASGTNGSSRRPRDHRVTAASLLGFSESEEEEQEEDEGAEEEEELADHSHRPAPYTASRNGKAKGREPWQGKENQHAARHPRGRAQSGRKPPRTPGAPGLRVAARTQFLNRPPVCSPPRPLLMERHVVKPPPDSPEPDSLPLETGADHVLQRHAWLAVFRYLSHRDLCVCMRVCRTLNRWCCDKQLWTKIDLSRQKSITPAMLSGIIRRQPITLDLSWTSISKKQLMWLINRLQGLKELILSGCSWSSVSALCSASCSCLRLLDLRWVEDVKDSHLRELVSPPSDTRPGQNEHRGRLPNLSELRLAGLDINDTSLRLLVRHLPQLTSLDLSHCPHVGDQSVNLLTAANSQLRDNLTEINLSD
SIO_010081: LOC109926221
subclass of: SO_0000673
so part of: LOC109926221
location: complement(join(3870105..3870109,3870736..3870954,3871749..3871910,3872496..3872659,3880970..3881745,3882053..3882220,3883278..3883364,3883484..3883627,3883949..3884149,3887206..3887292))
location: region:3870105-3887292:-1
so has part: feature:3887206-3887292:-1:exon
so has part: feature:3883949-3884149:-1:exon
so has part: feature:3883484-3883627:-1:exon
so has part: feature:3883278-3883364:-1:exon
so has part: feature:3882053-3882220:-1:exon
so has part: feature:3880970-3881745:-1:exon
so has part: feature:3872496-3872659:-1:exon
so has part: feature:3871749-3871910:-1:exon
so has part: feature:3870736-3870954:-1:exon
so has part: feature:3870105-3870109:-1:exon

XP_048476867.1
type: Protein
SIO_000068: ncbiprotein

position:3887292:-1
position: 3887292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3887206-3887292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3883949-3884149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883484-3883627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3883278-3883364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3882053-3882220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3880970-3881745:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3872496-3872659:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3871749-3871910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3870736-3870954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3870105-3870109:-1:exon

LOC109924425
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3890194..3902415)
location: region:3890194-3902415:-1
so has part: feature:3890194-3902415:-1:exon
subclass of: SO_0000010

109924425
type: Gene
SIO_000068: ncbigene

position:3890194:-1
position: 3890194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3902415:-1
position: 3902415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3890194-3902415:-1:exon

LOC109924425
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924425
product: 3-methyl-2-oxobutanoate dehydrogenase [lipoamide] kinase, mitochondrial-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620919.1
SIO_010081: LOC109924425
subclass of: SO_0000673
so part of: LOC109924425
location: complement(join(3890194..3891147,3891552..3891713,3892639..3892728,3893617..3893745,3895978..3896051,3896874..3896972,3897882..3898001,3898219..3898266,3898587..3898697,3899267..3899335,3901452..3902415))
location: region:3890194-3902415:-1
so has part: feature:3901452-3902415:-1:exon
so has part: feature:3899267-3899335:-1:exon
so has part: feature:3898587-3898697:-1:exon
so has part: feature:3898219-3898266:-1:exon
so has part: feature:3897882-3898001:-1:exon
so has part: feature:3896874-3896972:-1:exon
so has part: feature:3895978-3896051:-1:exon
so has part: feature:3893617-3893745:-1:exon
so has part: feature:3892639-3892728:-1:exon
so has part: feature:3891552-3891713:-1:exon
so has part: feature:3890194-3891147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3901452-3902415:-1:exon

position:3901452:-1
position: 3901452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3899267-3899335:-1:exon

position:3899267:-1
position: 3899267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3899335:-1
position: 3899335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3898587-3898697:-1:exon

position:3898587:-1
position: 3898587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3898697:-1
position: 3898697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3898219-3898266:-1:exon

position:3898219:-1
position: 3898219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3898266:-1
position: 3898266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3897882-3898001:-1:exon

position:3897882:-1
position: 3897882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3898001:-1
position: 3898001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3896874-3896972:-1:exon

position:3896874:-1
position: 3896874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3896972:-1
position: 3896972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3895978-3896051:-1:exon

position:3895978:-1
position: 3895978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3896051:-1
position: 3896051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3893617-3893745:-1:exon

position:3893617:-1
position: 3893617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3893745:-1
position: 3893745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3892639-3892728:-1:exon

position:3892639:-1
position: 3892639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3892728:-1
position: 3892728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3891552-3891713:-1:exon

position:3891552:-1
position: 3891552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3891713:-1
position: 3891713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3890194-3891147:-1:exon

position:3891147:-1
position: 3891147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109924425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-methyl-2-oxobutanoate dehydrogenase [lipoamide] kinase, mitochondrial-like
translation: MMMMMMMRRVGGGPAGWARTSLKILLARSSTRWRSTSASDHYHHHHQHYHEVTKERCKAVSSFYNQSLIDTAAEKLSVRLTPTTMLYAGKSPDGSHVLKSARYLLKELPVRIAHRIKSIRNLPFILGCNPTILQVHELYIRAFQKLSEFPPIENREIEGLYCQLLQQLLDDHKDVVTLLAEGFRESRRHVKDEAVIRYFLDKTLTSRLGMRMLATHHLMLHEDRPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRISGHVAARFPYIPMPLDYILPELLKNAMRSTMESHLDTPYNVPDIVVTIANNDVDFIIRISDRGGGIPHRCLDKVMDYHFSTAECSTQDLQANTILGNMVDMVNSGQSSPMHGFGFGLPTSRAYAEYLSGSLVIQSLQGIGTDVYLRLRHIDGKEEAFRI
SIO_010081: LOC109924425
subclass of: SO_0000673
so part of: LOC109924425
location: complement(join(3891003..3891147,3891552..3891713,3892639..3892728,3893617..3893745,3895978..3896051,3896874..3896972,3897882..3898001,3898219..3898266,3898587..3898697,3899267..3899335,3901452..3901676))
location: region:3891003-3901676:-1
so has part: feature:3901452-3901676:-1:exon
so has part: feature:3899267-3899335:-1:exon
so has part: feature:3898587-3898697:-1:exon
so has part: feature:3898219-3898266:-1:exon
so has part: feature:3897882-3898001:-1:exon
so has part: feature:3896874-3896972:-1:exon
so has part: feature:3895978-3896051:-1:exon
so has part: feature:3893617-3893745:-1:exon
so has part: feature:3892639-3892728:-1:exon
so has part: feature:3891552-3891713:-1:exon
so has part: feature:3891003-3891147:-1:exon

XP_048476876.1
type: Protein
SIO_000068: ncbiprotein

position:3891003:-1
position: 3891003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3901676:-1
position: 3901676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3901452-3901676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3899267-3899335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3898587-3898697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3898219-3898266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3897882-3898001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3896874-3896972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3895978-3896051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3893617-3893745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3892639-3892728:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3891552-3891713:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3891003-3891147:-1:exon

LOC125488092
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3905267..3911101)
location: region:3905267-3911101:-1
so has part: feature:3905267-3911101:-1:exon
subclass of: SO_0000010

125488092
type: Gene
SIO_000068: ncbigene

position:3905267:-1
position: 3905267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3911101:-1
position: 3911101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3905267-3911101:-1:exon

LOC125488092
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488092
product: ras-related protein Rab-35-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620922.1
SIO_010081: LOC125488092
subclass of: SO_0000673
so part of: LOC125488092
location: complement(join(3905267..3906714,3908358..3908482,3908723..3908847,3909442..3909565,3909760..3909810,3910839..3911101))
location: region:3905267-3911101:-1
so has part: feature:3910839-3911101:-1:exon
so has part: feature:3909760-3909810:-1:exon
so has part: feature:3909442-3909565:-1:exon
so has part: feature:3908723-3908847:-1:exon
so has part: feature:3908358-3908482:-1:exon
so has part: feature:3905267-3906714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3910839-3911101:-1:exon

position:3910839:-1
position: 3910839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3909760-3909810:-1:exon

position:3909760:-1
position: 3909760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3909810:-1
position: 3909810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3909442-3909565:-1:exon

position:3909442:-1
position: 3909442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3909565:-1
position: 3909565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3908723-3908847:-1:exon

position:3908723:-1
position: 3908723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3908847:-1
position: 3908847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3908358-3908482:-1:exon

position:3908358:-1
position: 3908358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3908482:-1
position: 3908482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3905267-3906714:-1:exon

position:3906714:-1
position: 3906714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-35-like
translation: MAGPRDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVDVNGEKVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNPESFINVKRWLFEISQNCDTVTKVLVGNKSEDPSRREVEFADAKRFSEQMGICLFETSAKENTNVEEMFNAVTYMVLRCKKDNLARLQQQNEVVKINKTKKKPGVKKCC
SIO_010081: LOC125488092
subclass of: SO_0000673
so part of: LOC125488092
location: complement(join(3906586..3906714,3908358..3908482,3908723..3908847,3909442..3909565,3909760..3909810,3910839..3910896))
location: region:3906586-3910896:-1
so has part: feature:3910839-3910896:-1:exon
so has part: feature:3909760-3909810:-1:exon
so has part: feature:3909442-3909565:-1:exon
so has part: feature:3908723-3908847:-1:exon
so has part: feature:3908358-3908482:-1:exon
so has part: feature:3906586-3906714:-1:exon

XP_048476879.1
type: Protein
SIO_000068: ncbiprotein

position:3906586:-1
position: 3906586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3910896:-1
position: 3910896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3910839-3910896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3909760-3909810:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3909442-3909565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3908723-3908847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3908358-3908482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3906586-3906714:-1:exon

sona
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: sona
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3915279..3923618)
location: region:3915279-3923618:-1
so has part: feature:3915279-3923618:-1:exon
subclass of: SO_0000010

125488087
type: Gene
SIO_000068: ncbigene

position:3915279:-1
position: 3915279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3923618:-1
position: 3923618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3915279-3923618:-1:exon

sona
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sona
product: SON DNA and RNA binding protein a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620911.1
SIO_010081: sona
subclass of: SO_0000673
so part of: sona
location: complement(join(3915279..3915777,3916352..3916444,3916841..3916954,3917552..3917830,3918566..3918839,3918951..3919332,3920260..3920344,3921239..3921733,3921865..3922505,3923325..3923618))
location: region:3915279-3923618:-1
so has part: feature:3923325-3923618:-1:exon
so has part: feature:3921865-3922505:-1:exon
so has part: feature:3921239-3921733:-1:exon
so has part: feature:3920260-3920344:-1:exon
so has part: feature:3918951-3919332:-1:exon
so has part: feature:3918566-3918839:-1:exon
so has part: feature:3917552-3917830:-1:exon
so has part: feature:3916841-3916954:-1:exon
so has part: feature:3916352-3916444:-1:exon
so has part: feature:3915279-3915777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3923325-3923618:-1:exon

position:3923325:-1
position: 3923325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3921865-3922505:-1:exon

position:3921865:-1
position: 3921865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3922505:-1
position: 3922505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3921239-3921733:-1:exon

position:3921239:-1
position: 3921239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3921733:-1
position: 3921733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3920260-3920344:-1:exon

position:3920260:-1
position: 3920260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3920344:-1
position: 3920344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3918951-3919332:-1:exon

position:3918951:-1
position: 3918951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3919332:-1
position: 3919332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3918566-3918839:-1:exon

position:3918566:-1
position: 3918566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3918839:-1
position: 3918839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3917552-3917830:-1:exon

position:3917552:-1
position: 3917552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3917830:-1
position: 3917830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3916841-3916954:-1:exon

position:3916841:-1
position: 3916841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3916954:-1
position: 3916954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3916352-3916444:-1:exon

position:3916352:-1
position: 3916352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3916444:-1
position: 3916444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3915279-3915777:-1:exon

position:3915777:-1
position: 3915777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sona
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sona
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2
translation: MCACVCVCYRVTAHYRVPISSPSTPNPGRSRSPQLAPAAPPRGSPSPRPTARLEAAPRGTSPTRGRHAGSPQKARTRSASGSSGRGAGRSKRESSTDYSPVQRPRQQVATSTPPAREDGGAELARRTSEGAGVRSRSPLPPARAATAAPHHPRRGDSGGGGVASPSRRAAQKKASEPPKRSLTPRRERSSSRRSASPPRPKRSSPRRGRSSPRQAKRSPRRSPTPRRHRSSRKSESPRGAVSARQAKASLRRSPSPRRRRSSSQCQRLSPRRSASPRRQRSSPRRRSVTPRRQRSSPRRRPPPPWRRRSVSPRRQRSSSRRSASPRRQRSLPRRSVSPRRQRSSPRKSTSPRHQRPSPRRSTSPRRQKSSPRRSASPRRQRSSPRRSVSPRHQRSSPRKSASPRRQRSSPRKSASPRRQRSSPRRSASPRRQRSSPRRSASPRRQRSSLRRSASPRRQRSSPRRSASPRRQRSSPRSVSPVHQRSSPRRQRSLPRKSVSPVEQTIAKAMCVTKAPEVIVKAKQGITKEQRVTTAPKCVTEDRGVVTNTEHVAKAPEVVAEEGGVIAQADQSFAEVSEVTARWSLLSSVRKVVAQGTCVAPLAQQEPSGRGSEGHLSAGRGPPGAHPPAPGQGGKEGPPAAPQPTEGRASRSASPRPTGTIRRPRPSKSRSPSPAGTGAQETGNRPQQARPSPTSSSSSDSGSSRSVTTPRRQREARTDRSPAAKRRARNRHSSSEAGRRVSRSPSRRGAPGRGRSRRSRSGSRRRRGAPGNRRHRHGGHTSSSLSGSSASRSRSVPRRKAEHKQRSPPTSRRRSRSPRKPIDSLRDSRSLSYSPAERRRSRRSRDSSNRRERRRRRSDSGSPVRKRRHGSPSPRERRRYPRSP
SIO_010081: sona
subclass of: SO_0000673
so part of: sona
location: complement(join(3915768..3915777,3916352..3916444,3916841..3916954,3917552..3917830,3918566..3918839,3918951..3919332,3920260..3920344,3921239..3921733,3921865..3922505,3923325..3923603))
location: region:3915768-3923603:-1
so has part: feature:3923325-3923603:-1:exon
so has part: feature:3921865-3922505:-1:exon
so has part: feature:3921239-3921733:-1:exon
so has part: feature:3920260-3920344:-1:exon
so has part: feature:3918951-3919332:-1:exon
so has part: feature:3918566-3918839:-1:exon
so has part: feature:3917552-3917830:-1:exon
so has part: feature:3916841-3916954:-1:exon
so has part: feature:3916352-3916444:-1:exon
so has part: feature:3915768-3915777:-1:exon

XP_048476868.1
type: Protein
SIO_000068: ncbiprotein

position:3915768:-1
position: 3915768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3923603:-1
position: 3923603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3923325-3923603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3921865-3922505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3921239-3921733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3920260-3920344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3918951-3919332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918566-3918839:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3917552-3917830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3916841-3916954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3916352-3916444:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3915768-3915777:-1:exon

LOC109926274
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3923815..3933704)
location: region:3923815-3933704:-1
so has part: feature:3923815-3933704:-1:exon
subclass of: SO_0000010

109926274
type: Gene
SIO_000068: ncbigene

position:3923815:-1
position: 3923815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3933704:-1
position: 3933704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3923815-3933704:-1:exon

LOC109926274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926274
product: serine/arginine repetitive matrix protein 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048620924.1
SIO_010081: LOC109926274
subclass of: SO_0000673
so part of: LOC109926274
location: complement(join(3923815..3924124,3925062..3925223,3926250..3926351,3926695..3926999,3933553..3933704))
location: region:3923815-3933704:-1
so has part: feature:3933553-3933704:-1:exon
so has part: feature:3926695-3926999:-1:exon
so has part: feature:3926250-3926351:-1:exon
so has part: feature:3925062-3925223:-1:exon
so has part: feature:3923815-3924124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3933553-3933704:-1:exon

position:3933553:-1
position: 3933553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926695-3926999:-1:exon

position:3926695:-1
position: 3926695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3926999:-1
position: 3926999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3926250-3926351:-1:exon

position:3926250:-1
position: 3926250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3926351:-1
position: 3926351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3925062-3925223:-1:exon

position:3925062:-1
position: 3925062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3925223:-1
position: 3925223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3923815-3924124:-1:exon

position:3924124:-1
position: 3924124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926274
product: serine/arginine repetitive matrix protein 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_048620923.1
SIO_010081: LOC109926274
subclass of: SO_0000673
so part of: LOC109926274
location: complement(join(3923815..3924124,3925062..3925223,3926250..3926351,3926695..3927002,3933553..3933704))
location: region:3923815-3933704:-1
so has part: feature:3933553-3933704:-1:exon
so has part: feature:3926695-3927002:-1:exon
so has part: feature:3926250-3926351:-1:exon
so has part: feature:3925062-3925223:-1:exon
so has part: feature:3923815-3924124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3933553-3933704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3926695-3927002:-1:exon

position:3927002:-1
position: 3927002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3926250-3926351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3925062-3925223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3923815-3924124:-1:exon

LOC109926274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2-like
translation: MYNGIGLPTPRGSGTNGYVQRNLSSIRHKKDRVDYKSEEELKKLESGLVKKPNQDILDHERKRKVELKCIELEDMMEEQGYSEEEIQQKVATFRQMLVEKVGSQGKEEPKARTAVSETHQLAEANEKKNERLRAAFGISDSYVDGSSFDPKRRAQEVAEKAEQQKQYGGSNVYEPARSRSPSPKRRKKKKARSRER
SIO_010081: LOC109926274
subclass of: SO_0000673
so part of: LOC109926274
location: complement(join(3924037..3924124,3925062..3925223,3926250..3926351,3926695..3926933))
location: region:3924037-3926933:-1
so has part: feature:3926695-3926933:-1:exon
so has part: feature:3926250-3926351:-1:exon
so has part: feature:3925062-3925223:-1:exon
so has part: feature:3924037-3924124:-1:exon

XP_048476880.1
type: Protein
SIO_000068: ncbiprotein

position:3924037:-1
position: 3924037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3926933:-1
position: 3926933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3926695-3926933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3926250-3926351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925062-3925223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3924037-3924124:-1:exon

LOC109926274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2-like
translation: MYNGIGLPTPRGSGTNGYVQRNLSSIRHKKDRVDYKSEEELKKLESGLVKKPNQDILDHERKRKVELKCIELEDMMEEQGYSEEEIQQKVATFRQMLVEKVGSQGKEEPKARTAVSETHQLAEANEKKNERLRAAFGISDSYVDGSSFDPKRRAQEVAEKAEQQKQYGGSNVYEPARSRSPSPKRRKKKKARSRER
SIO_010081: LOC109926274
subclass of: SO_0000673
so part of: LOC109926274
location: complement(join(3924037..3924124,3925062..3925223,3926250..3926351,3926695..3926933))
location: region:3924037-3926933:-1
so has part: feature:3926695-3926933:-1:exon
so has part: feature:3926250-3926351:-1:exon
so has part: feature:3925062-3925223:-1:exon
so has part: feature:3924037-3924124:-1:exon

XP_048476881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926695-3926933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3926250-3926351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925062-3925223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3924037-3924124:-1:exon

mmgt1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mmgt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3937595..3940420)
location: region:3937595-3940420:-1
so has part: feature:3937595-3940420:-1:exon
subclass of: SO_0000010

125488094
type: Gene
SIO_000068: ncbigene

position:3937595:-1
position: 3937595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3940420:-1
position: 3940420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3937595-3940420:-1:exon

mmgt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mmgt1
product: membrane magnesium transporter 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620928.1
SIO_010081: mmgt1
subclass of: SO_0000673
so part of: mmgt1
location: complement(join(3937595..3937976,3938818..3938921,3939259..3939311,3940340..3940420))
location: region:3937595-3940420:-1
so has part: feature:3940340-3940420:-1:exon
so has part: feature:3939259-3939311:-1:exon
so has part: feature:3938818-3938921:-1:exon
so has part: feature:3937595-3937976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3940340-3940420:-1:exon

position:3940340:-1
position: 3940340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3939259-3939311:-1:exon

position:3939259:-1
position: 3939259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3939311:-1
position: 3939311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3938818-3938921:-1:exon

position:3938818:-1
position: 3938818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3938921:-1
position: 3938921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3937595-3937976:-1:exon

position:3937976:-1
position: 3937976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mmgt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mmgt1
product: membrane magnesium transporter 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620927.1
SIO_010081: mmgt1
subclass of: SO_0000673
so part of: mmgt1
location: complement(join(3937595..3937976,3938818..3938921,3939259..3939311,3940205..3940396))
location: region:3937595-3940396:-1
so has part: feature:3940205-3940396:-1:exon
so has part: feature:3939259-3939311:-1:exon
so has part: feature:3938818-3938921:-1:exon
so has part: feature:3937595-3937976:-1:exon

position:3940396:-1
position: 3940396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3940205-3940396:-1:exon

position:3940205:-1
position: 3940205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3939259-3939311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3938818-3938921:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3937595-3937976:-1:exon

mmgt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mmgt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 5
translation: MRLTEKENETLPADIVLQTLLAFLLTCYGIVHVAGEFKDMDATSELKNKTFETLRNHPSFYLFNHRGRVLFRPLDVETKTPAPAVPSALKLRQPKPGWR
SIO_010081: mmgt1
subclass of: SO_0000673
so part of: mmgt1
location: complement(join(3937823..3937976,3938818..3938921,3939259..3939300))
location: region:3937823-3939300:-1
so has part: feature:3939259-3939300:-1:exon
so has part: feature:3938818-3938921:-1:exon
so has part: feature:3937823-3937976:-1:exon

XP_048476884.1
type: Protein
SIO_000068: ncbiprotein

position:3937823:-1
position: 3937823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3939300:-1
position: 3939300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3939259-3939300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3938818-3938921:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3937823-3937976:-1:exon

mmgt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mmgt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 5
translation: MRLTEKENETLPADIVLQTLLAFLLTCYGIVHVAGEFKDMDATSELKNKTFETLRNHPSFYLFNHRGRVLFRPLDVETKTPAPAVPSALKLRQPKPGWR
SIO_010081: mmgt1
subclass of: SO_0000673
so part of: mmgt1
location: complement(join(3937823..3937976,3938818..3938921,3939259..3939300))
location: region:3937823-3939300:-1
so has part: feature:3939259-3939300:-1:exon
so has part: feature:3938818-3938921:-1:exon
so has part: feature:3937823-3937976:-1:exon

XP_048476885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3939259-3939300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3938818-3938921:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3937823-3937976:-1:exon

LOC125488088
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3943368..3974390
location: region:3943368-3974390:1
so has part: feature:3943368-3974390:1:exon
subclass of: SO_0000010

125488088
type: Gene
SIO_000068: ncbigene

position:3943368:1
position: 3943368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3974390:1
position: 3974390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943368-3974390:1:exon

LOC125488088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488088
product: serine/threonine-protein kinase 36-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620912.1
SIO_010081: LOC125488088
subclass of: SO_0000673
so part of: LOC125488088
location: join(3943368..3943409,3944331..3944471,3945465..3945542,3945941..3946071,3947532..3947781,3948322..3948415,3950072..3950241,3951097..3951335,3953810..3953921,3954538..3954681,3955097..3955276,3956994..3957091,3957400..3957505,3974235..3974390)
location: region:3943368-3974390:1
so has part: feature:3943368-3943409:1:exon
so has part: feature:3944331-3944471:1:exon
so has part: feature:3945465-3945542:1:exon
so has part: feature:3945941-3946071:1:exon
so has part: feature:3947532-3947781:1:exon
so has part: feature:3948322-3948415:1:exon
so has part: feature:3950072-3950241:1:exon
so has part: feature:3951097-3951335:1:exon
so has part: feature:3953810-3953921:1:exon
so has part: feature:3954538-3954681:1:exon
so has part: feature:3955097-3955276:1:exon
so has part: feature:3956994-3957091:1:exon
so has part: feature:3957400-3957505:1:exon
so has part: feature:3974235-3974390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3943368-3943409:1:exon

position:3943409:1
position: 3943409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3944331-3944471:1:exon

position:3944331:1
position: 3944331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3944471:1
position: 3944471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3945465-3945542:1:exon

position:3945465:1
position: 3945465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3945542:1
position: 3945542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3945941-3946071:1:exon

position:3945941:1
position: 3945941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3946071:1
position: 3946071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3947532-3947781:1:exon

position:3947532:1
position: 3947532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3947781:1
position: 3947781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3948322-3948415:1:exon

position:3948322:1
position: 3948322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3948415:1
position: 3948415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3950072-3950241:1:exon

position:3950072:1
position: 3950072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3950241:1
position: 3950241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3951097-3951335:1:exon

position:3951097:1
position: 3951097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3951335:1
position: 3951335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3953810-3953921:1:exon

position:3953810:1
position: 3953810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3953921:1
position: 3953921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3954538-3954681:1:exon

position:3954538:1
position: 3954538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3954681:1
position: 3954681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3955097-3955276:1:exon

position:3955097:1
position: 3955097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3955276:1
position: 3955276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3956994-3957091:1:exon

position:3956994:1
position: 3956994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3957091:1
position: 3957091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3957400-3957505:1:exon

position:3957400:1
position: 3957400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3957505:1
position: 3957505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3974235-3974390:1:exon

position:3974235:1
position: 3974235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125488088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 36-like
translation: MERSRAGEYGGGGAVVALKFIPKTGRSEKELRSLRREMEIMQGLRHPNIVQMLDSLETDNEVVVVTEFAEGELFQILEDDGNLPEEQVRDIACQLVSALYYLHSHRILHRDMKPQNILLGKGGVLKLCDFGFARAMSLQTLVLTSIKGTPLYMSPELVEEKPYDHTADLWSLGCILYELYVGTPPFYTNSIFQLVSIIIKDPVKWPKGISPQFKCFLQGLLTKDPRQRLSWPALLYHPFVADRVVIVDDTQDCSVEKPFTIQASPETQALKEQQAKELAPKSGQSKILRKAREKMLEESRRKHSVQAGVPAGQARAGPTGEAKQMQPLPAAAGAPHLLGSQQAVRPSHEAAVSGSPECPAPPAGTGSTAEKEIDQGPPPTPGLHEISRDYEREFPEVQVGPRVTRRRSHSMENVDLDNEEMDSDEEWQQLIEVTDPSALQLSTPLTLLRDQSFQERVQARLGDSSTQVLEGMLEGASRLRPVLRVIGNLLATRCDWDLLHAFCQHLQLPQFLLTVLGQMLHSEMIRQQPWCVKVLSDLLAVLAAYFSSNFDAEPSGTSCGLQVFEQSAKQFLRLLETLLSSATEREMTLREQSITESYQRVHTNVYMAMHFPEAVPLRIASAEILMTMLTNFGTICPEDSGVKRCA
SIO_010081: LOC125488088
subclass of: SO_0000673
so part of: LOC125488088
location: join(3943368..3943409,3944331..3944471,3945465..3945542,3945941..3946071,3947532..3947781,3948322..3948415,3950072..3950241,3951097..3951335,3953810..3953921,3954538..3954681,3955097..3955276,3956994..3957091,3957400..3957505,3974235..3974390)
location: region:3943368-3974390:1
so has part: feature:3943368-3943409:1:exon
so has part: feature:3944331-3944471:1:exon
so has part: feature:3945465-3945542:1:exon
so has part: feature:3945941-3946071:1:exon
so has part: feature:3947532-3947781:1:exon
so has part: feature:3948322-3948415:1:exon
so has part: feature:3950072-3950241:1:exon
so has part: feature:3951097-3951335:1:exon
so has part: feature:3953810-3953921:1:exon
so has part: feature:3954538-3954681:1:exon
so has part: feature:3955097-3955276:1:exon
so has part: feature:3956994-3957091:1:exon
so has part: feature:3957400-3957505:1:exon
so has part: feature:3974235-3974390:1:exon

XP_048476869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3943368-3943409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3944331-3944471:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3945465-3945542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3945941-3946071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3947532-3947781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3948322-3948415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3950072-3950241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3951097-3951335:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3953810-3953921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3954538-3954681:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3955097-3955276:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3956994-3957091:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3957400-3957505:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3974235-3974390:1:exon

LOC125488089
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3980168..3993596)
location: region:3980168-3993596:-1
so has part: feature:3980168-3993596:-1:exon
subclass of: SO_0000010

125488089
type: Gene
SIO_000068: ncbigene

position:3980168:-1
position: 3980168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3993596:-1
position: 3993596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3980168-3993596:-1:exon

LOC125488089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488089
product: ataxin-2-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620914.1
SIO_010081: LOC125488089
subclass of: SO_0000673
so part of: LOC125488089
location: complement(join(3980168..3980269,3984060..3984178,3986283..3986433,3986972..3987043,3987794..3987850,3988345..3988381,3993160..3993596))
location: region:3980168-3993596:-1
so has part: feature:3993160-3993596:-1:exon
so has part: feature:3988345-3988381:-1:exon
so has part: feature:3987794-3987850:-1:exon
so has part: feature:3986972-3987043:-1:exon
so has part: feature:3986283-3986433:-1:exon
so has part: feature:3984060-3984178:-1:exon
so has part: feature:3980168-3980269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3993160-3993596:-1:exon

position:3993160:-1
position: 3993160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3988345-3988381:-1:exon

position:3988345:-1
position: 3988345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3988381:-1
position: 3988381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3987794-3987850:-1:exon

position:3987794:-1
position: 3987794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3987850:-1
position: 3987850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3986972-3987043:-1:exon

position:3986972:-1
position: 3986972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3987043:-1
position: 3987043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3986283-3986433:-1:exon

position:3986283:-1
position: 3986283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3986433:-1
position: 3986433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3984060-3984178:-1:exon

position:3984060:-1
position: 3984060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3984178:-1
position: 3984178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3980168-3980269:-1:exon

position:3980269:-1
position: 3980269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-2-like protein
translation: MRGRNSIKGSPQSPVFEGIYNNTRMLHFLTAVVGSTCDVRVRNGTVYEGIFKTLSSKFELAVDTVHRKTMETVAGPKSEDIIDTMIFKPADVVVVQFRDVDLNYATRDKTSDTVVSSKVNGEHREKVLQRWEGGDSNSDDFDLESDVKHSRDQQSPQETLGPQQQGEPQRSRVEENPSFY
SIO_010081: LOC125488089
subclass of: SO_0000673
so part of: LOC125488089
location: complement(join(3980168..3980269,3984060..3984178,3986283..3986433,3986972..3987043,3987794..3987850,3988345..3988381,3993160..3993164))
location: region:3980168-3993164:-1
so has part: feature:3993160-3993164:-1:exon
so has part: feature:3988345-3988381:-1:exon
so has part: feature:3987794-3987850:-1:exon
so has part: feature:3986972-3987043:-1:exon
so has part: feature:3986283-3986433:-1:exon
so has part: feature:3984060-3984178:-1:exon
so has part: feature:3980168-3980269:-1:exon

XP_048476871.1
type: Protein
SIO_000068: ncbiprotein

position:3993164:-1
position: 3993164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3993160-3993164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3988345-3988381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3987794-3987850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3986972-3987043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3986283-3986433:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3984060-3984178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3980168-3980269:-1:exon

LOC125488090
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3995871..4006763)
location: region:3995871-4006763:-1
so has part: feature:3995871-4006763:-1:exon
subclass of: SO_0000010

125488090
type: Gene
SIO_000068: ncbigene

position:3995871:-1
position: 3995871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4006763:-1
position: 4006763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3995871-4006763:-1:exon

LOC125488090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488090
product: integrin alpha-M-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620915.1
SIO_010081: LOC125488090
subclass of: SO_0000673
so part of: LOC125488090
location: complement(join(3995871..3995999,3998364..3998438,3999476..3999586,4001038..4001110,4002084..4002167,4002626..4002705,4003717..4003818,4004651..4004786,4005743..4005816,4005941..4006072,4006737..4006763))
location: region:3995871-4006763:-1
so has part: feature:4006737-4006763:-1:exon
so has part: feature:4005941-4006072:-1:exon
so has part: feature:4005743-4005816:-1:exon
so has part: feature:4004651-4004786:-1:exon
so has part: feature:4003717-4003818:-1:exon
so has part: feature:4002626-4002705:-1:exon
so has part: feature:4002084-4002167:-1:exon
so has part: feature:4001038-4001110:-1:exon
so has part: feature:3999476-3999586:-1:exon
so has part: feature:3998364-3998438:-1:exon
so has part: feature:3995871-3995999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4006737-4006763:-1:exon

position:4006737:-1
position: 4006737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4005941-4006072:-1:exon

position:4005941:-1
position: 4005941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4006072:-1
position: 4006072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4005743-4005816:-1:exon

position:4005743:-1
position: 4005743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4005816:-1
position: 4005816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4004651-4004786:-1:exon

position:4004651:-1
position: 4004651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4004786:-1
position: 4004786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4003717-4003818:-1:exon

position:4003717:-1
position: 4003717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4003818:-1
position: 4003818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4002626-4002705:-1:exon

position:4002626:-1
position: 4002626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4002705:-1
position: 4002705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4002084-4002167:-1:exon

position:4002084:-1
position: 4002084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4002167:-1
position: 4002167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4001038-4001110:-1:exon

position:4001038:-1
position: 4001038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4001110:-1
position: 4001110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3999476-3999586:-1:exon

position:3999476:-1
position: 3999476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3999586:-1
position: 3999586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3998364-3998438:-1:exon

position:3998364:-1
position: 3998364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3998438:-1
position: 3998438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3995871-3995999:-1:exon

position:3995999:-1
position: 3995999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-M-like
translation: MNQKTRASKTCVNDYLNPTDVHINFSLTALFNGSSTGLTPILNERGTRMLSQMIPIEINCGEDNVCTDRLNVTFHTEKAVLVGAASLLDLHVSVWNLGEDSYRPSIIFHQPLGLHFRKLRNLQSTRVECASNSSSINNLTGKFICNVSHPILQSKALAMFVLTFEVGDMNVSEEGLRIRAEGKSENPSGIYEDSVHEQTIPVKYAVNIVVSRVSSTRYITFMDRMNEERKIKHVYKVENIGSRTVPINVMINASEKVAGLVRWTPEITVTVQQDHASCVLANEGQELSEGQLTKERKEDRPELSKRKISFTMLVLEKNCFVEIILDGVVRTTQNVRRVCE
SIO_010081: LOC125488090
subclass of: SO_0000673
so part of: LOC125488090
location: complement(join(3995871..3995999,3998364..3998438,3999476..3999586,4001038..4001110,4002084..4002167,4002626..4002705,4003717..4003818,4004651..4004786,4005743..4005816,4005941..4006072,4006737..4006763))
location: region:3995871-4006763:-1
so has part: feature:4006737-4006763:-1:exon
so has part: feature:4005941-4006072:-1:exon
so has part: feature:4005743-4005816:-1:exon
so has part: feature:4004651-4004786:-1:exon
so has part: feature:4003717-4003818:-1:exon
so has part: feature:4002626-4002705:-1:exon
so has part: feature:4002084-4002167:-1:exon
so has part: feature:4001038-4001110:-1:exon
so has part: feature:3999476-3999586:-1:exon
so has part: feature:3998364-3998438:-1:exon
so has part: feature:3995871-3995999:-1:exon

XP_048476872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4006737-4006763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4005941-4006072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4005743-4005816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4004651-4004786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4003717-4003818:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4002626-4002705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4002084-4002167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4001038-4001110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3999476-3999586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3998364-3998438:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3995871-3995999:-1:exon

LOC109925597
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4008880..4019711
location: region:4008880-4019711:1
so has part: feature:4008880-4019711:1:exon
subclass of: SO_0000010

109925597
type: Gene
SIO_000068: ncbigene

position:4008880:1
position: 4008880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4019711:1
position: 4019711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4008880-4019711:1:exon

LOC109925597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925597
product: vascular endothelial zinc finger 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 13 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620916.1
SIO_010081: LOC109925597
subclass of: SO_0000673
so part of: LOC109925597
location: join(4008880..4010321,4010517..4011163,4017487..4017613,4019538..4019711)
location: region:4008880-4019711:1
so has part: feature:4008880-4010321:1:exon
so has part: feature:4010517-4011163:1:exon
so has part: feature:4017487-4017613:1:exon
so has part: feature:4019538-4019711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4008880-4010321:1:exon

position:4010321:1
position: 4010321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4010517-4011163:1:exon

position:4010517:1
position: 4010517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4011163:1
position: 4011163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4017487-4017613:1:exon

position:4017487:1
position: 4017487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4017613:1
position: 4017613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4019538-4019711:1:exon

position:4019538:1
position: 4019538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial zinc finger 1-like
translation: MEAAWSSFIFPTAAVDQTAGVQADLLPILTATSVSQDSSRAPRASDGPLLPERPKEPQPQAQTEPDKGKARGKGPFVCPLCSKELKNNYNLRRHQRTHSSGGQSQLQAGTNPSPPTMVPIALLSMTMAGVGGGLGSAEAAPQPTGPSPSPTRRVRKEHSCELCGKAFRDIYHLNRHKLSHSDEKPFECPICQQRFKRKDRMCYHVRSHEGGVNKPYLCSHCGKGFSRSDYTPVGSQYLVKNLINSSAVLLAMILRNGMALGNLLDASIMVLVKPVHWLKNSVPFLPDQLRRRMCLVLELGPVTPNLINNLQISRTTGGERGEGGRV
SIO_010081: LOC109925597
subclass of: SO_0000673
so part of: LOC109925597
location: join(4010289..4010321,4010517..4011163,4017487..4017613,4019538..4019711)
location: region:4010289-4019711:1
so has part: feature:4010289-4010321:1:exon
so has part: feature:4010517-4011163:1:exon
so has part: feature:4017487-4017613:1:exon
so has part: feature:4019538-4019711:1:exon

XP_048476873.1
type: Protein
SIO_000068: ncbiprotein

position:4010289:1
position: 4010289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4010289-4010321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4010517-4011163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4017487-4017613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4019538-4019711:1:exon

cdipt
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cdipt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4026468..4034732
location: region:4026468-4034732:1
so has part: feature:4026468-4034732:1:exon
subclass of: SO_0000010

125488091
type: Gene
SIO_000068: ncbigene

position:4026468:1
position: 4026468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4034732:1
position: 4034732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026468-4034732:1:exon

cdipt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cdipt
product: CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620917.1
SIO_010081: cdipt
subclass of: SO_0000673
so part of: cdipt
location: join(4026468..4026897,4028603..4028737,4029805..4030002,4034303..4034732)
location: region:4026468-4034732:1
so has part: feature:4026468-4026897:1:exon
so has part: feature:4028603-4028737:1:exon
so has part: feature:4029805-4030002:1:exon
so has part: feature:4034303-4034732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4026468-4026897:1:exon

position:4026897:1
position: 4026897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4028603-4028737:1:exon

position:4028603:1
position: 4028603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028737:1
position: 4028737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4029805-4030002:1:exon

position:4029805:1
position: 4029805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4030002:1
position: 4030002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4034303-4034732:1:exon

position:4034303:1
position: 4034303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cdipt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cdipt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
translation: MVSVFLFVPNLIGYSRIFLALAAFYFMPSSPKLATGLYLLSSFLDSFDGHAARLLNQCSRFGMMLDMLTDRCATMCLLVNLSLLYPRYVFLFQLSMSLDISSHWLHLHRSVILPQIHPGDTGLVPSLNIHFFQLLLYCSFPICAIKTAISVIHLITAARNMAAMDQAEGEQGLASRKQD
SIO_010081: cdipt
subclass of: SO_0000673
so part of: cdipt
location: join(4026861..4026897,4028603..4028737,4029805..4030002,4034303..4034472)
location: region:4026861-4034472:1
so has part: feature:4026861-4026897:1:exon
so has part: feature:4028603-4028737:1:exon
so has part: feature:4029805-4030002:1:exon
so has part: feature:4034303-4034472:1:exon

XP_048476874.1
type: Protein
SIO_000068: ncbiprotein

position:4026861:1
position: 4026861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4034472:1
position: 4034472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026861-4026897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4028603-4028737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4029805-4030002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4034303-4034472:1:exon

si:ch211-214j24.10
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: si:ch211-214j24.10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4045234..4049994
location: region:4045234-4049994:1
so has part: feature:4045234-4049994:1:exon
subclass of: SO_0000010

109926048
type: Gene
SIO_000068: ncbigene

position:4045234:1
position: 4045234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4049994:1
position: 4049994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4045234-4049994:1:exon

si:ch211-214j24.10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: si:ch211-214j24.10
product: uncharacterized protein LOC558894 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620929.1
SIO_010081: si:ch211-214j24.10
subclass of: SO_0000673
so part of: si:ch211-214j24.10
location: join(4045234..4045929,4046662..4047607,4048114..4048146,4049710..4049994)
location: region:4045234-4049994:1
so has part: feature:4045234-4045929:1:exon
so has part: feature:4046662-4047607:1:exon
so has part: feature:4048114-4048146:1:exon
so has part: feature:4049710-4049994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4045234-4045929:1:exon

position:4045929:1
position: 4045929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4046662-4047607:1:exon

position:4046662:1
position: 4046662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4047607:1
position: 4047607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4048114-4048146:1:exon

position:4048114:1
position: 4048114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4048146:1
position: 4048146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4049710-4049994:1:exon

position:4049710:1
position: 4049710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:ch211-214j24.10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: si:ch211-214j24.10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:ch211-214j24.10
translation: MGLDRLGVVGMFQMLGKSRSRDHSLKIRRKPFRTEMRKNFFTQSTVNLWNTLPQEVVGVRLGLTDTAPTGKMDGSVSREAEEPRSLGPANGVGVKYRRALDGGGGAAGGGGGYYRPPGRAPGGEGGYHRPVGGYNRAAGKLQQGDGRVRGCGHVQSQGDRRSFGRRFDRKPAEGAANGFARRWKPRPLGRGCPGSRVTAPRNGEGPDSPASPDEAEGSGGAGEEEEEEEEDEEEEEQEQHRWALFKPPAAFPMDSSIRISYASKLKENLSIDSAGAGRACDSSETGPRLGQGLRAIFHNQWGLSFITEPGTGSDGSRAQQRAGLNCQQALDPGRLGGPRPETSPPANRLSPDCEQWRGSDPLQLQDVVRYFSREWDRIWERHKREPSVVVVYEESPNTTGLIE
SIO_010081: si:ch211-214j24.10
subclass of: SO_0000673
so part of: si:ch211-214j24.10
location: join(4045756..4045929,4046662..4047607,4048114..4048146,4049710..4049768)
location: region:4045756-4049768:1
so has part: feature:4045756-4045929:1:exon
so has part: feature:4046662-4047607:1:exon
so has part: feature:4048114-4048146:1:exon
so has part: feature:4049710-4049768:1:exon

XP_048476886.1
type: Protein
SIO_000068: ncbiprotein

position:4045756:1
position: 4045756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4049768:1
position: 4049768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4045756-4045929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4046662-4047607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4048114-4048146:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4049710-4049768:1:exon

kif22
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: kif22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4050728..4080319)
location: region:4050728-4080319:-1
so has part: feature:4050728-4080319:-1:exon
subclass of: SO_0000010

109926049
type: Gene
SIO_000068: ncbigene

position:4050728:-1
position: 4050728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4080319:-1
position: 4080319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050728-4080319:-1:exon

kif22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: kif22
product: kinesin family member 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 24 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048620930.1
SIO_010081: kif22
subclass of: SO_0000673
so part of: kif22
location: complement(join(4050728..4051172,4052082..4052138,4057014..4057205,4058113..4058186,4058405..4058555,4058827..4059010,4066740..4066857,4067101..4067254,4071155..4071275,4072202..4072311,4072754..4072963,4073362..4073522,4073615..4073742,4075902..4076125,4079905..4080319))
location: region:4050728-4080319:-1
so has part: feature:4079905-4080319:-1:exon
so has part: feature:4075902-4076125:-1:exon
so has part: feature:4073615-4073742:-1:exon
so has part: feature:4073362-4073522:-1:exon
so has part: feature:4072754-4072963:-1:exon
so has part: feature:4072202-4072311:-1:exon
so has part: feature:4071155-4071275:-1:exon
so has part: feature:4067101-4067254:-1:exon
so has part: feature:4066740-4066857:-1:exon
so has part: feature:4058827-4059010:-1:exon
so has part: feature:4058405-4058555:-1:exon
so has part: feature:4058113-4058186:-1:exon
so has part: feature:4057014-4057205:-1:exon
so has part: feature:4052082-4052138:-1:exon
so has part: feature:4050728-4051172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4079905-4080319:-1:exon

position:4079905:-1
position: 4079905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4075902-4076125:-1:exon

position:4075902:-1
position: 4075902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4076125:-1
position: 4076125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4073615-4073742:-1:exon

position:4073615:-1
position: 4073615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4073742:-1
position: 4073742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4073362-4073522:-1:exon

position:4073362:-1
position: 4073362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4073522:-1
position: 4073522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4072754-4072963:-1:exon

position:4072754:-1
position: 4072754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4072963:-1
position: 4072963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4072202-4072311:-1:exon

position:4072202:-1
position: 4072202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4072311:-1
position: 4072311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4071155-4071275:-1:exon

position:4071155:-1
position: 4071155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4071275:-1
position: 4071275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4067101-4067254:-1:exon

position:4067101:-1
position: 4067101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4067254:-1
position: 4067254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4066740-4066857:-1:exon

position:4066740:-1
position: 4066740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4066857:-1
position: 4066857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4058827-4059010:-1:exon

position:4058827:-1
position: 4058827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059010:-1
position: 4059010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4058405-4058555:-1:exon

position:4058405:-1
position: 4058405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4058555:-1
position: 4058555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4058113-4058186:-1:exon

position:4058113:-1
position: 4058113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4058186:-1
position: 4058186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4057014-4057205:-1:exon

position:4057014:-1
position: 4057014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4057205:-1
position: 4057205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4052082-4052138:-1:exon

position:4052082:-1
position: 4052082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4052138:-1
position: 4052138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4050728-4051172:-1:exon

position:4051172:-1
position: 4051172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kif22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: kif22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF22
translation: MSERTRSGRRGEKKQMQSTTSSLPPPPADVQSSRKVAGPHHRRQVQVVVRLRPYQATEDDQQQGPCVRGLDTRSLEIVNWRSRTETMQYNFDAFYGDDASQQEIYVNSVKPILSHILNGQNASVFAYGPTGAGKTHTMLGSAKQPGVVPRSLLDIFRMVREQSDQLGGPSWSFAVTMSYLEIYQEKVLDLLETTHQDLPIREDQDKNIFIPNLTQQPITSFVEFEQFFLPATQRRTTASTKLNCRSSRSHSVLLIKVMKLQREAPFRQLTGKLYLIDLAGSEDNRKTGNEGVRLKESGAINTSLFVLSKVVDALNQGLCRVPYRDSKLTRLLQDSLGGTAHSVMITNIAPEYKHYFNTLTALNFAAKSKLVVNRPFTQETIQPIGICHLKRSNEEVSSSSQHPAKRMKSAESESAEASEELILSPLLKPGEYDPDAFDSDMLERISNLENMLRKHGKSGLPLLGTPKEERIQLLKKLEESRLQIEKLEQRQKQLEKAISLQETAAEQGMNNNRSGVLRRASVAKPRKQAVVTPLQRLDNSELLKPGNMLVLKRKEKYEMKDCGSNMENELELTVDLELTQKHKDYILNILNNGSLKQLKTLQRVGDKTAKLIMGWREHNGPYSQIEDLEKIGMSSRTLSTFMKANVVSCMVK
SIO_010081: kif22
subclass of: SO_0000673
so part of: kif22
location: complement(join(4051143..4051172,4052082..4052138,4057014..4057205,4058113..4058186,4058405..4058555,4058827..4059010,4066740..4066857,4067101..4067254,4071155..4071275,4072202..4072311,4072754..4072963,4073362..4073522,4073615..4073742,4075902..4076125,4079905..4079949))
location: region:4051143-4079949:-1
so has part: feature:4079905-4079949:-1:exon
so has part: feature:4075902-4076125:-1:exon
so has part: feature:4073615-4073742:-1:exon
so has part: feature:4073362-4073522:-1:exon
so has part: feature:4072754-4072963:-1:exon
so has part: feature:4072202-4072311:-1:exon
so has part: feature:4071155-4071275:-1:exon
so has part: feature:4067101-4067254:-1:exon
so has part: feature:4066740-4066857:-1:exon
so has part: feature:4058827-4059010:-1:exon
so has part: feature:4058405-4058555:-1:exon
so has part: feature:4058113-4058186:-1:exon
so has part: feature:4057014-4057205:-1:exon
so has part: feature:4052082-4052138:-1:exon
so has part: feature:4051143-4051172:-1:exon

XP_048476887.1
type: Protein
SIO_000068: ncbiprotein

position:4051143:-1
position: 4051143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4079949:-1
position: 4079949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4079905-4079949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4075902-4076125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4073615-4073742:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4073362-4073522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4072754-4072963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4072202-4072311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4071155-4071275:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4067101-4067254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4066740-4066857:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4058827-4059010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4058405-4058555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4058113-4058186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4057014-4057205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4052082-4052138:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4051143-4051172:-1:exon

pagr1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pagr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4080853..4090077
location: region:4080853-4090077:1
so has part: feature:4080853-4090077:1:exon
subclass of: SO_0000010

125488109
type: Gene
SIO_000068: ncbigene

position:4080853:1
position: 4080853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4090077:1
position: 4090077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4080853-4090077:1:exon

pagr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pagr1
product: PAXIP1 associated glutamate-rich protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048620980.1
SIO_010081: pagr1
subclass of: SO_0000673
so part of: pagr1
location: join(4080853..4080987,4085005..4085127,4087808..4088119,4088748..4088827,4089347..4090077)
location: region:4080853-4090077:1
so has part: feature:4080853-4080987:1:exon
so has part: feature:4085005-4085127:1:exon
so has part: feature:4087808-4088119:1:exon
so has part: feature:4088748-4088827:1:exon
so has part: feature:4089347-4090077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4080853-4080987:1:exon

position:4080987:1
position: 4080987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4085005-4085127:1:exon

position:4085005:1
position: 4085005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4085127:1
position: 4085127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4087808-4088119:1:exon

position:4087808:1
position: 4087808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088119:1
position: 4088119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4088748-4088827:1:exon

position:4088748:1
position: 4088748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088827:1
position: 4088827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4089347-4090077:1:exon

position:4089347:1
position: 4089347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pagr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pagr1
product: PAXIP1 associated glutamate-rich protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048620978.1
SIO_010081: pagr1
subclass of: SO_0000673
so part of: pagr1
location: join(4080853..4080987,4085005..4085136,4087808..4088119,4088748..4088827,4089347..4090030)
location: region:4080853-4090030:1
so has part: feature:4080853-4080987:1:exon
so has part: feature:4085005-4085136:1:exon
so has part: feature:4087808-4088119:1:exon
so has part: feature:4088748-4088827:1:exon
so has part: feature:4089347-4090030:1:exon

position:4090030:1
position: 4090030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4080853-4080987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4085005-4085136:1:exon

position:4085136:1
position: 4085136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4087808-4088119:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4088748-4088827:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4089347-4090030:1:exon

pagr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pagr1
product: PAXIP1 associated glutamate-rich protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048620977.1
SIO_010081: pagr1
subclass of: SO_0000673
so part of: pagr1
location: join(4080853..4080987,4085005..4085127,4086650..4086693,4087808..4088119,4088748..4088827,4089347..4090030)
location: region:4080853-4090030:1
so has part: feature:4080853-4080987:1:exon
so has part: feature:4085005-4085127:1:exon
so has part: feature:4086650-4086693:1:exon
so has part: feature:4087808-4088119:1:exon
so has part: feature:4088748-4088827:1:exon
so has part: feature:4089347-4090030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4080853-4080987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4085005-4085127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4086650-4086693:1:exon

position:4086650:1
position: 4086650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4086693:1
position: 4086693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4087808-4088119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4088748-4088827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4089347-4090030:1:exon

pagr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pagr1
product: PAXIP1 associated glutamate-rich protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048620979.1
SIO_010081: pagr1
subclass of: SO_0000673
so part of: pagr1
location: join(4080853..4080987,4087808..4088119,4088748..4088827,4089347..4090029)
location: region:4080853-4090029:1
so has part: feature:4080853-4080987:1:exon
so has part: feature:4087808-4088119:1:exon
so has part: feature:4088748-4088827:1:exon
so has part: feature:4089347-4090029:1:exon

position:4090029:1
position: 4090029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4080853-4080987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4087808-4088119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4088748-4088827:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089347-4090029:1:exon

pagr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pagr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAXIP1-associated glutamate-rich protein 1
translation: MQTEDADPAVSLAELTVDTEDSWCVECSDQEIQDAETWTPSPQEILRLYGALAEEGSSLELSCRPLPRRPPTPEADPTEEEAEEEEEAEEQATEKPHVPTEFDFDDEPTPQKSFLGVRRTPAGSSSRTQRRQARLDKVLSDMKRHRKIEEQMMKTGKDIFELDMDEDEVPSPGRSKGIFQRRNY
SIO_010081: pagr1
subclass of: SO_0000673
so part of: pagr1
location: join(4087836..4088119,4088748..4088827,4089347..4089537)
location: region:4087836-4089537:1
so has part: feature:4087836-4088119:1:exon
so has part: feature:4088748-4088827:1:exon
so has part: feature:4089347-4089537:1:exon

XP_048476934.1
type: Protein
SIO_000068: ncbiprotein

position:4087836:1
position: 4087836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4089537:1
position: 4089537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4087836-4088119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4088748-4088827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4089347-4089537:1:exon

pagr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pagr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAXIP1-associated glutamate-rich protein 1
translation: MQTEDADPAVSLAELTVDTEDSWCVECSDQEIQDAETWTPSPQEILRLYGALAEEGSSLELSCRPLPRRPPTPEADPTEEEAEEEEEAEEQATEKPHVPTEFDFDDEPTPQKSFLGVRRTPAGSSSRTQRRQARLDKVLSDMKRHRKIEEQMMKTGKDIFELDMDEDEVPSPGRSKGIFQRRNY
SIO_010081: pagr1
subclass of: SO_0000673
so part of: pagr1
location: join(4087836..4088119,4088748..4088827,4089347..4089537)
location: region:4087836-4089537:1
so has part: feature:4087836-4088119:1:exon
so has part: feature:4088748-4088827:1:exon
so has part: feature:4089347-4089537:1:exon

XP_048476935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4087836-4088119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4088748-4088827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4089347-4089537:1:exon

pagr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pagr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAXIP1-associated glutamate-rich protein 1
translation: MQTEDADPAVSLAELTVDTEDSWCVECSDQEIQDAETWTPSPQEILRLYGALAEEGSSLELSCRPLPRRPPTPEADPTEEEAEEEEEAEEQATEKPHVPTEFDFDDEPTPQKSFLGVRRTPAGSSSRTQRRQARLDKVLSDMKRHRKIEEQMMKTGKDIFELDMDEDEVPSPGRSKGIFQRRNY
SIO_010081: pagr1
subclass of: SO_0000673
so part of: pagr1
location: join(4087836..4088119,4088748..4088827,4089347..4089537)
location: region:4087836-4089537:1
so has part: feature:4087836-4088119:1:exon
so has part: feature:4088748-4088827:1:exon
so has part: feature:4089347-4089537:1:exon

XP_048476936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4087836-4088119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4088748-4088827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4089347-4089537:1:exon

pagr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pagr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAXIP1-associated glutamate-rich protein 1
translation: MQTEDADPAVSLAELTVDTEDSWCVECSDQEIQDAETWTPSPQEILRLYGALAEEGSSLELSCRPLPRRPPTPEADPTEEEAEEEEEAEEQATEKPHVPTEFDFDDEPTPQKSFLGVRRTPAGSSSRTQRRQARLDKVLSDMKRHRKIEEQMMKTGKDIFELDMDEDEVPSPGRSKGIFQRRNY
SIO_010081: pagr1
subclass of: SO_0000673
so part of: pagr1
location: join(4087836..4088119,4088748..4088827,4089347..4089537)
location: region:4087836-4089537:1
so has part: feature:4087836-4088119:1:exon
so has part: feature:4088748-4088827:1:exon
so has part: feature:4089347-4089537:1:exon

XP_048476937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4087836-4088119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4088748-4088827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4089347-4089537:1:exon

ppp4cb
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ppp4cb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4093405..4106150)
location: region:4093405-4106150:-1
so has part: feature:4093405-4106150:-1:exon
subclass of: SO_0000010

109926399
type: Gene
SIO_000068: ncbigene

position:4093405:-1
position: 4093405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4106150:-1
position: 4106150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4093405-4106150:-1:exon

ppp4cb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ppp4cb
product: protein phosphatase 4, catalytic subunit b
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020526256.2
SIO_010081: ppp4cb
subclass of: SO_0000673
so part of: ppp4cb
location: complement(join(4093405..4094640,4097026..4097215,4097383..4097509,4098257..4098430,4099495..4099596,4099843..4099893,4100799..4100850,4103346..4103458,4106026..4106150))
location: region:4093405-4106150:-1
so has part: feature:4106026-4106150:-1:exon
so has part: feature:4103346-4103458:-1:exon
so has part: feature:4100799-4100850:-1:exon
so has part: feature:4099843-4099893:-1:exon
so has part: feature:4099495-4099596:-1:exon
so has part: feature:4098257-4098430:-1:exon
so has part: feature:4097383-4097509:-1:exon
so has part: feature:4097026-4097215:-1:exon
so has part: feature:4093405-4094640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4106026-4106150:-1:exon

position:4106026:-1
position: 4106026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4103346-4103458:-1:exon

position:4103346:-1
position: 4103346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4103458:-1
position: 4103458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4100799-4100850:-1:exon

position:4100799:-1
position: 4100799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100850:-1
position: 4100850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4099843-4099893:-1:exon

position:4099843:-1
position: 4099843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4099893:-1
position: 4099893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4099495-4099596:-1:exon

position:4099495:-1
position: 4099495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4099596:-1
position: 4099596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4098257-4098430:-1:exon

position:4098257:-1
position: 4098257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4098430:-1
position: 4098430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4097383-4097509:-1:exon

position:4097383:-1
position: 4097383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097509:-1
position: 4097509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4097026-4097215:-1:exon

position:4097026:-1
position: 4097026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097215:-1
position: 4097215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4093405-4094640:-1:exon

position:4094640:-1
position: 4094640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppp4cb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ppp4cb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 catalytic subunit B
translation: MTEISDLDRQIEQLRQCELIKENEVKALCAKAREILVEESNVQQVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVTQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQETRGIPSKKPVADYFL
SIO_010081: ppp4cb
subclass of: SO_0000673
so part of: ppp4cb
location: complement(join(4094511..4094640,4097026..4097215,4097383..4097509,4098257..4098430,4099495..4099596,4099843..4099893,4100799..4100850,4103346..4103443))
location: region:4094511-4103443:-1
so has part: feature:4103346-4103443:-1:exon
so has part: feature:4100799-4100850:-1:exon
so has part: feature:4099843-4099893:-1:exon
so has part: feature:4099495-4099596:-1:exon
so has part: feature:4098257-4098430:-1:exon
so has part: feature:4097383-4097509:-1:exon
so has part: feature:4097026-4097215:-1:exon
so has part: feature:4094511-4094640:-1:exon

XP_020381845.1
type: Protein
SIO_000068: ncbiprotein

position:4094511:-1
position: 4094511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4103443:-1
position: 4103443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4103346-4103443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4100799-4100850:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4099843-4099893:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4099495-4099596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4098257-4098430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4097383-4097509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4097026-4097215:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094511-4094640:-1:exon

LOC125488107
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125488107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4112418..4115375)
location: region:4112418-4115375:-1
so has part: feature:4112418-4115375:-1:exon
subclass of: SO_0000010

125488107
type: Gene
SIO_000068: ncbigene

position:4112418:-1
position: 4112418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4115375:-1
position: 4115375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4112418-4115375:-1:exon

LOC125488107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125488107
product: fructose-bisphosphate aldolase C-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620974.1
SIO_010081: LOC125488107
subclass of: SO_0000673
so part of: LOC125488107
location: complement(join(4112418..4113019,4113709..4113908,4114428..4114602,4115245..4115375))
location: region:4112418-4115375:-1
so has part: feature:4115245-4115375:-1:exon
so has part: feature:4114428-4114602:-1:exon
so has part: feature:4113709-4113908:-1:exon
so has part: feature:4112418-4113019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4115245-4115375:-1:exon

position:4115245:-1
position: 4115245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4114428-4114602:-1:exon

position:4114428:-1
position: 4114428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4114602:-1
position: 4114602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4113709-4113908:-1:exon

position:4113709:-1
position: 4113709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4113908:-1
position: 4113908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4112418-4113019:-1:exon

position:4113019:-1
position: 4113019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125488107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125488107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fructose-bisphosphate aldolase C-like
translation: MVTPGHSCTQKYSAEEIAMATVTALRRTVPAAVPGITFLSGGQSEEEASINLNAINKCPLHKPWALTFSYGRALQASALKAWSGKKEQTKAAEAEFIKRAQANGLAAQGKYTAMGQAGEAAGQSLFVADHAY
SIO_010081: LOC125488107
subclass of: SO_0000673
so part of: LOC125488107
location: complement(join(4112924..4113019,4113709..4113908,4114428..4114530))
location: region:4112924-4114530:-1
so has part: feature:4114428-4114530:-1:exon
so has part: feature:4113709-4113908:-1:exon
so has part: feature:4112924-4113019:-1:exon

XP_048476931.1
type: Protein
SIO_000068: ncbiprotein

position:4112924:-1
position: 4112924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4114530:-1
position: 4114530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4114428-4114530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4113709-4113908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4112924-4113019:-1:exon

LOC109925823
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4123196..4141150
location: region:4123196-4141150:1
so has part: feature:4123196-4141150:1:exon
subclass of: SO_0000010

109925823
type: Gene
SIO_000068: ncbigene

position:4123196:1
position: 4123196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4141150:1
position: 4141150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4123196-4141150:1:exon

LOC109925823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925823
product: serine/threonine-protein kinase TAO2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048620966.1
SIO_010081: LOC109925823
subclass of: SO_0000673
so part of: LOC109925823
location: join(4123196..4123393,4126660..4126928,4127312..4127383,4127728..4127829,4127971..4128016,4128461..4128557,4128936..4129049,4129544..4129635,4129794..4129887,4130075..4130156,4131574..4131741,4131997..4132203,4133043..4133201,4133457..4133693,4133894..4134022,4134710..4134913,4135884..4136123,4138958..4139170,4139387..4139569,4140106..4141150)
location: region:4123196-4141150:1
so has part: feature:4123196-4123393:1:exon
so has part: feature:4126660-4126928:1:exon
so has part: feature:4127312-4127383:1:exon
so has part: feature:4127728-4127829:1:exon
so has part: feature:4127971-4128016:1:exon
so has part: feature:4128461-4128557:1:exon
so has part: feature:4128936-4129049:1:exon
so has part: feature:4129544-4129635:1:exon
so has part: feature:4129794-4129887:1:exon
so has part: feature:4130075-4130156:1:exon
so has part: feature:4131574-4131741:1:exon
so has part: feature:4131997-4132203:1:exon
so has part: feature:4133043-4133201:1:exon
so has part: feature:4133457-4133693:1:exon
so has part: feature:4133894-4134022:1:exon
so has part: feature:4134710-4134913:1:exon
so has part: feature:4135884-4136123:1:exon
so has part: feature:4138958-4139170:1:exon
so has part: feature:4139387-4139569:1:exon
so has part: feature:4140106-4141150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4123196-4123393:1:exon

position:4123393:1
position: 4123393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4126660-4126928:1:exon

position:4126660:1
position: 4126660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4126928:1
position: 4126928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4127312-4127383:1:exon

position:4127312:1
position: 4127312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4127383:1
position: 4127383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4127728-4127829:1:exon

position:4127728:1
position: 4127728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4127829:1
position: 4127829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4127971-4128016:1:exon

position:4127971:1
position: 4127971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4128016:1
position: 4128016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4128461-4128557:1:exon

position:4128461:1
position: 4128461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4128557:1
position: 4128557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4128936-4129049:1:exon

position:4128936:1
position: 4128936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4129049:1
position: 4129049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4129544-4129635:1:exon

position:4129544:1
position: 4129544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4129635:1
position: 4129635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4129794-4129887:1:exon

position:4129794:1
position: 4129794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4129887:1
position: 4129887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4130075-4130156:1:exon

position:4130075:1
position: 4130075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4130156:1
position: 4130156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4131574-4131741:1:exon

position:4131574:1
position: 4131574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4131741:1
position: 4131741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4131997-4132203:1:exon

position:4131997:1
position: 4131997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4132203:1
position: 4132203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4133043-4133201:1:exon

position:4133043:1
position: 4133043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4133201:1
position: 4133201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4133457-4133693:1:exon

position:4133457:1
position: 4133457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4133693:1
position: 4133693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4133894-4134022:1:exon

position:4133894:1
position: 4133894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4134022:1
position: 4134022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4134710-4134913:1:exon

position:4134710:1
position: 4134710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4134913:1
position: 4134913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4135884-4136123:1:exon

position:4135884:1
position: 4135884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4136123:1
position: 4136123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4138958-4139170:1:exon

position:4138958:1
position: 4138958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4139170:1
position: 4139170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4139387-4139569:1:exon

position:4139387:1
position: 4139387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4139569:1
position: 4139569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4140106-4141150:1:exon

position:4140106:1
position: 4140106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925823
product: serine/threonine-protein kinase TAO2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048620965.1
SIO_010081: LOC109925823
subclass of: SO_0000673
so part of: LOC109925823
location: join(4123532..4123624,4126660..4126928,4127312..4127383,4127728..4127829,4127971..4128016,4128461..4128557,4128936..4129049,4129544..4129635,4129794..4129887,4130075..4130156,4131574..4131741,4131997..4132203,4133043..4133201,4133457..4133693,4133894..4134022,4134710..4134913,4135884..4136123,4138958..4139170,4139387..4139569,4140106..4141150)
location: region:4123532-4141150:1
so has part: feature:4123532-4123624:1:exon
so has part: feature:4126660-4126928:1:exon
so has part: feature:4127312-4127383:1:exon
so has part: feature:4127728-4127829:1:exon
so has part: feature:4127971-4128016:1:exon
so has part: feature:4128461-4128557:1:exon
so has part: feature:4128936-4129049:1:exon
so has part: feature:4129544-4129635:1:exon
so has part: feature:4129794-4129887:1:exon
so has part: feature:4130075-4130156:1:exon
so has part: feature:4131574-4131741:1:exon
so has part: feature:4131997-4132203:1:exon
so has part: feature:4133043-4133201:1:exon
so has part: feature:4133457-4133693:1:exon
so has part: feature:4133894-4134022:1:exon
so has part: feature:4134710-4134913:1:exon
so has part: feature:4135884-4136123:1:exon
so has part: feature:4138958-4139170:1:exon
so has part: feature:4139387-4139569:1:exon
so has part: feature:4140106-4141150:1:exon

position:4123532:1
position: 4123532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4123532-4123624:1:exon

position:4123624:1
position: 4123624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4126660-4126928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4127312-4127383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4127728-4127829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4127971-4128016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4128461-4128557:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4128936-4129049:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4129544-4129635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4129794-4129887:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4130075-4130156:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4131574-4131741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4131997-4132203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4133043-4133201:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4133457-4133693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4133894-4134022:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4134710-4134913:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4135884-4136123:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4138958-4139170:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4139387-4139569:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4140106-4141150:1:exon

LOC109925823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925823
product: serine/threonine-protein kinase TAO2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048620967.1
SIO_010081: LOC109925823
subclass of: SO_0000673
so part of: LOC109925823
location: join(4123532..4123624,4126660..4126928,4127312..4127383,4127728..4127829,4127971..4128016,4128461..4128557,4128936..4129049,4129544..4129635,4129794..4129887,4130075..4130156,4131574..4131741,4133043..4133201,4133457..4133693,4133894..4134022,4134710..4134913,4135884..4136123,4138958..4139170,4139387..4139569,4140106..4141150)
location: region:4123532-4141150:1
so has part: feature:4123532-4123624:1:exon
so has part: feature:4126660-4126928:1:exon
so has part: feature:4127312-4127383:1:exon
so has part: feature:4127728-4127829:1:exon
so has part: feature:4127971-4128016:1:exon
so has part: feature:4128461-4128557:1:exon
so has part: feature:4128936-4129049:1:exon
so has part: feature:4129544-4129635:1:exon
so has part: feature:4129794-4129887:1:exon
so has part: feature:4130075-4130156:1:exon
so has part: feature:4131574-4131741:1:exon
so has part: feature:4133043-4133201:1:exon
so has part: feature:4133457-4133693:1:exon
so has part: feature:4133894-4134022:1:exon
so has part: feature:4134710-4134913:1:exon
so has part: feature:4135884-4136123:1:exon
so has part: feature:4138958-4139170:1:exon
so has part: feature:4139387-4139569:1:exon
so has part: feature:4140106-4141150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4123532-4123624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4126660-4126928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4127312-4127383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4127728-4127829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4127971-4128016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4128461-4128557:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4128936-4129049:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4129544-4129635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4129794-4129887:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4130075-4130156:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4131574-4131741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4133043-4133201:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4133457-4133693:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4133894-4134022:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4134710-4134913:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4135884-4136123:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4138958-4139170:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4139387-4139569:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4140106-4141150:1:exon

LOC109925823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase TAO2-like isoform X1
translation: MLTSARAGSLKDPEVAELFYKDDPEKLFVDLREIGHGSFGAVYFARDMRSSEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQNLRHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHRKPLQEVEIAVITHGALQGLAYLHSHNMIHRDVKAGNVLLTEPGQVKLADFGSASIVAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPVLQSNHWSDYFRNFVASCLQKIPQDRPTSELLLKHVFVKRERPQTVIMDLIQRTKDAVRELDNLQYRKMKKILFQETRNGPATDTQEDDEELDACVGRTGTINSVESSHSVPSMSISASSQSSSVNSLADASDDNSEIAMMQEGDHTVTSNSSVIHLRPGNDDLYDDPYSGEMEAQPPAPSSSSTSSSSAAARRRAHYRNREHFATIRTASLVTRQIQEHEQDSALREQMSGYKRMRRQHQKQLMALENKLKAEMDEHQLRLDKELETQRNNFGAECEKVSKRQQSLLEKEGKAAGIEEKKFQQHILSQQKKELSSLLEAQKRQYKLRKEQLKEELQENQSTPKRERQEWLLRQKENLQHAQAEEEANLLRRQRHYLELQCRQYRRKALLSRHNLEQDLLREELNKKQTQKDLECAMLLRHHESTQEQEFRHLSTVQRTRTELIRLQHQTELSNQLDYNKRREQELRQKHVAEIRQQPKCLKSKELQIKKQFQDTCKIQTRQYKALRNHLLETTVKSEHKAVLKRLKDEQTRKLAILAEQYDHSINEMLSTQALRLDETQDSEYQVLRAQLQQELELLNAYQSKIKMHTEAQHEREAKELEQRVSIRRALLEQRIEEEMLTLQTQRTERIRSLLERQAREIEAFDSESLRLGFSNMALSSLPPASAFTHSYQVSRGASRGVGGREGATAASGPGPGPGPGPGSGTPQAWRQQPTLATGSWAHPGPVPGSRGSSLVLRSSPQALHQTASGGQAEAGIGRSTSVTSQISNGSQLSYS
SIO_010081: LOC109925823
subclass of: SO_0000673
so part of: LOC109925823
location: join(4126797..4126928,4127312..4127383,4127728..4127829,4127971..4128016,4128461..4128557,4128936..4129049,4129544..4129635,4129794..4129887,4130075..4130156,4131574..4131741,4131997..4132203,4133043..4133201,4133457..4133693,4133894..4134022,4134710..4134913,4135884..4136123,4138958..4139170,4139387..4139569,4140106..4140591)
location: region:4126797-4140591:1
so has part: feature:4126797-4126928:1:exon
so has part: feature:4127312-4127383:1:exon
so has part: feature:4127728-4127829:1:exon
so has part: feature:4127971-4128016:1:exon
so has part: feature:4128461-4128557:1:exon
so has part: feature:4128936-4129049:1:exon
so has part: feature:4129544-4129635:1:exon
so has part: feature:4129794-4129887:1:exon
so has part: feature:4130075-4130156:1:exon
so has part: feature:4131574-4131741:1:exon
so has part: feature:4131997-4132203:1:exon
so has part: feature:4133043-4133201:1:exon
so has part: feature:4133457-4133693:1:exon
so has part: feature:4133894-4134022:1:exon
so has part: feature:4134710-4134913:1:exon
so has part: feature:4135884-4136123:1:exon
so has part: feature:4138958-4139170:1:exon
so has part: feature:4139387-4139569:1:exon
so has part: feature:4140106-4140591:1:exon

XP_048476922.1
type: Protein
SIO_000068: ncbiprotein

position:4126797:1
position: 4126797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4140591:1
position: 4140591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4126797-4126928:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4127312-4127383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4127728-4127829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4127971-4128016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4128461-4128557:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4128936-4129049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4129544-4129635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4129794-4129887:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4130075-4130156:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4131574-4131741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4131997-4132203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4133043-4133201:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4133457-4133693:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4133894-4134022:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4134710-4134913:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4135884-4136123:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4138958-4139170:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4139387-4139569:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4140106-4140591:1:exon

LOC109925823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase TAO2-like isoform X1
translation: MLTSARAGSLKDPEVAELFYKDDPEKLFVDLREIGHGSFGAVYFARDMRSSEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQNLRHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHRKPLQEVEIAVITHGALQGLAYLHSHNMIHRDVKAGNVLLTEPGQVKLADFGSASIVAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPVLQSNHWSDYFRNFVASCLQKIPQDRPTSELLLKHVFVKRERPQTVIMDLIQRTKDAVRELDNLQYRKMKKILFQETRNGPATDTQEDDEELDACVGRTGTINSVESSHSVPSMSISASSQSSSVNSLADASDDNSEIAMMQEGDHTVTSNSSVIHLRPGNDDLYDDPYSGEMEAQPPAPSSSSTSSSSAAARRRAHYRNREHFATIRTASLVTRQIQEHEQDSALREQMSGYKRMRRQHQKQLMALENKLKAEMDEHQLRLDKELETQRNNFGAECEKVSKRQQSLLEKEGKAAGIEEKKFQQHILSQQKKELSSLLEAQKRQYKLRKEQLKEELQENQSTPKRERQEWLLRQKENLQHAQAEEEANLLRRQRHYLELQCRQYRRKALLSRHNLEQDLLREELNKKQTQKDLECAMLLRHHESTQEQEFRHLSTVQRTRTELIRLQHQTELSNQLDYNKRREQELRQKHVAEIRQQPKCLKSKELQIKKQFQDTCKIQTRQYKALRNHLLETTVKSEHKAVLKRLKDEQTRKLAILAEQYDHSINEMLSTQALRLDETQDSEYQVLRAQLQQELELLNAYQSKIKMHTEAQHEREAKELEQRVSIRRALLEQRIEEEMLTLQTQRTERIRSLLERQAREIEAFDSESLRLGFSNMALSSLPPASAFTHSYQVSRGASRGVGGREGATAASGPGPGPGPGPGSGTPQAWRQQPTLATGSWAHPGPVPGSRGSSLVLRSSPQALHQTASGGQAEAGIGRSTSVTSQISNGSQLSYS
SIO_010081: LOC109925823
subclass of: SO_0000673
so part of: LOC109925823
location: join(4126797..4126928,4127312..4127383,4127728..4127829,4127971..4128016,4128461..4128557,4128936..4129049,4129544..4129635,4129794..4129887,4130075..4130156,4131574..4131741,4131997..4132203,4133043..4133201,4133457..4133693,4133894..4134022,4134710..4134913,4135884..4136123,4138958..4139170,4139387..4139569,4140106..4140591)
location: region:4126797-4140591:1
so has part: feature:4126797-4126928:1:exon
so has part: feature:4127312-4127383:1:exon
so has part: feature:4127728-4127829:1:exon
so has part: feature:4127971-4128016:1:exon
so has part: feature:4128461-4128557:1:exon
so has part: feature:4128936-4129049:1:exon
so has part: feature:4129544-4129635:1:exon
so has part: feature:4129794-4129887:1:exon
so has part: feature:4130075-4130156:1:exon
so has part: feature:4131574-4131741:1:exon
so has part: feature:4131997-4132203:1:exon
so has part: feature:4133043-4133201:1:exon
so has part: feature:4133457-4133693:1:exon
so has part: feature:4133894-4134022:1:exon
so has part: feature:4134710-4134913:1:exon
so has part: feature:4135884-4136123:1:exon
so has part: feature:4138958-4139170:1:exon
so has part: feature:4139387-4139569:1:exon
so has part: feature:4140106-4140591:1:exon

XP_048476923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4126797-4126928:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4127312-4127383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4127728-4127829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4127971-4128016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4128461-4128557:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4128936-4129049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4129544-4129635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4129794-4129887:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4130075-4130156:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4131574-4131741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4131997-4132203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4133043-4133201:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4133457-4133693:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4133894-4134022:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4134710-4134913:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4135884-4136123:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4138958-4139170:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4139387-4139569:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4140106-4140591:1:exon

LOC109925823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase TAO2-like isoform X2
translation: MLTSARAGSLKDPEVAELFYKDDPEKLFVDLREIGHGSFGAVYFARDMRSSEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQNLRHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHRKPLQEVEIAVITHGALQGLAYLHSHNMIHRDVKAGNVLLTEPGQVKLADFGSASIVAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPVLQSNHWSDYFRNFVASCLQKIPQDRPTSELLLKHVFVKRERPQTVIMDLIQRTKDAVRELDNLQYRKMKKILFQETRNGPATDTQEDDEGNDDLYDDPYSGEMEAQPPAPSSSSTSSSSAAARRRAHYRNREHFATIRTASLVTRQIQEHEQDSALREQMSGYKRMRRQHQKQLMALENKLKAEMDEHQLRLDKELETQRNNFGAECEKVSKRQQSLLEKEGKAAGIEEKKFQQHILSQQKKELSSLLEAQKRQYKLRKEQLKEELQENQSTPKRERQEWLLRQKENLQHAQAEEEANLLRRQRHYLELQCRQYRRKALLSRHNLEQDLLREELNKKQTQKDLECAMLLRHHESTQEQEFRHLSTVQRTRTELIRLQHQTELSNQLDYNKRREQELRQKHVAEIRQQPKCLKSKELQIKKQFQDTCKIQTRQYKALRNHLLETTVKSEHKAVLKRLKDEQTRKLAILAEQYDHSINEMLSTQALRLDETQDSEYQVLRAQLQQELELLNAYQSKIKMHTEAQHEREAKELEQRVSIRRALLEQRIEEEMLTLQTQRTERIRSLLERQAREIEAFDSESLRLGFSNMALSSLPPASAFTHSYQVSRGASRGVGGREGATAASGPGPGPGPGPGSGTPQAWRQQPTLATGSWAHPGPVPGSRGSSLVLRSSPQALHQTASGGQAEAGIGRSTSVTSQISNGSQLSYS
SIO_010081: LOC109925823
subclass of: SO_0000673
so part of: LOC109925823
location: join(4126797..4126928,4127312..4127383,4127728..4127829,4127971..4128016,4128461..4128557,4128936..4129049,4129544..4129635,4129794..4129887,4130075..4130156,4131574..4131741,4133043..4133201,4133457..4133693,4133894..4134022,4134710..4134913,4135884..4136123,4138958..4139170,4139387..4139569,4140106..4140591)
location: region:4126797-4140591:1
so has part: feature:4126797-4126928:1:exon
so has part: feature:4127312-4127383:1:exon
so has part: feature:4127728-4127829:1:exon
so has part: feature:4127971-4128016:1:exon
so has part: feature:4128461-4128557:1:exon
so has part: feature:4128936-4129049:1:exon
so has part: feature:4129544-4129635:1:exon
so has part: feature:4129794-4129887:1:exon
so has part: feature:4130075-4130156:1:exon
so has part: feature:4131574-4131741:1:exon
so has part: feature:4133043-4133201:1:exon
so has part: feature:4133457-4133693:1:exon
so has part: feature:4133894-4134022:1:exon
so has part: feature:4134710-4134913:1:exon
so has part: feature:4135884-4136123:1:exon
so has part: feature:4138958-4139170:1:exon
so has part: feature:4139387-4139569:1:exon
so has part: feature:4140106-4140591:1:exon

XP_048476924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4126797-4126928:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4127312-4127383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4127728-4127829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4127971-4128016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4128461-4128557:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4128936-4129049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4129544-4129635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4129794-4129887:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4130075-4130156:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4131574-4131741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4133043-4133201:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4133457-4133693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4133894-4134022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4134710-4134913:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4135884-4136123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4138958-4139170:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4139387-4139569:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4140106-4140591:1:exon

LOC109925824
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4141121..4159720)
location: region:4141121-4159720:-1
so has part: feature:4141121-4159720:-1:exon
subclass of: SO_0000010

109925824
type: Gene
SIO_000068: ncbigene

position:4141121:-1
position: 4141121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4159720:-1
position: 4159720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4141121-4159720:-1:exon

LOC109925824
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925824
product: dynein assembly factor with WDR repeat domains 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620918.1
SIO_010081: LOC109925824
subclass of: SO_0000673
so part of: LOC109925824
location: complement(join(4141121..4141333,4141480..4141572,4141748..4141813,4142286..4142385,4143151..4143182,4143481..4143589,4146082..4146271,4147526..4147658,4149419..4149503,4157626..4157941,4159621..4159720))
location: region:4141121-4159720:-1
so has part: feature:4159621-4159720:-1:exon
so has part: feature:4157626-4157941:-1:exon
so has part: feature:4149419-4149503:-1:exon
so has part: feature:4147526-4147658:-1:exon
so has part: feature:4146082-4146271:-1:exon
so has part: feature:4143481-4143589:-1:exon
so has part: feature:4143151-4143182:-1:exon
so has part: feature:4142286-4142385:-1:exon
so has part: feature:4141748-4141813:-1:exon
so has part: feature:4141480-4141572:-1:exon
so has part: feature:4141121-4141333:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4159621-4159720:-1:exon

position:4159621:-1
position: 4159621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4157626-4157941:-1:exon

position:4157626:-1
position: 4157626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4157941:-1
position: 4157941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4149419-4149503:-1:exon

position:4149419:-1
position: 4149419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4149503:-1
position: 4149503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4147526-4147658:-1:exon

position:4147526:-1
position: 4147526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4147658:-1
position: 4147658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4146082-4146271:-1:exon

position:4146082:-1
position: 4146082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4146271:-1
position: 4146271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4143481-4143589:-1:exon

position:4143481:-1
position: 4143481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4143589:-1
position: 4143589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4143151-4143182:-1:exon

position:4143151:-1
position: 4143151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4143182:-1
position: 4143182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4142286-4142385:-1:exon

position:4142286:-1
position: 4142286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4142385:-1
position: 4142385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4141748-4141813:-1:exon

position:4141748:-1
position: 4141748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4141813:-1
position: 4141813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4141480-4141572:-1:exon

position:4141480:-1
position: 4141480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4141572:-1
position: 4141572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4141121-4141333:-1:exon

position:4141333:-1
position: 4141333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109925824
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein assembly factor with WDR repeat domains 1-like
translation: MKQPDWGYTYHTRFQAVISTCRARRRSGTLLSPGSQALANQRSQIRLANRGAPITSATRGTPMCLANRGATLSNQSGALGGRCGRGVLPWRRKLMLGLLRVRLHGPRPRPRPQPEAEREAEDVVGKAGAEGELRVVRRIDCEVPVICCCFNRSAQLLAVGLTTGHIKLYKPCSGAFVYQLRDTETLNTNLPVTSLNFCPPGAASGDLLLATYASGKVKLWHVSTQKCLHTIVENQQTLAAAFNASGTRFASAGTAASIRLYDTASRQCLQTFASSPSPTVMDGHRSRVFAVKFNPHNLTELVSGGWDDTVQFWTENHPHSLRRIFGPHLCGDSLQIHPVTNEILTGSWRRENSLEVWDYQSGEKIQDIPEENGAYSLTYSCRWLGPDHLIAAGTRSNVCRLVHRETMTTVGRFGNLPRGVYSIDVSTDRSEKSIVAVCSENYVYLLEHQQV
SIO_010081: LOC109925824
subclass of: SO_0000673
so part of: LOC109925824
location: complement(join(4141202..4141333,4141480..4141572,4141748..4141813,4142286..4142385,4143151..4143182,4143481..4143589,4146082..4146271,4147526..4147658,4149419..4149503,4157626..4157941,4159621..4159720))
location: region:4141202-4159720:-1
so has part: feature:4159621-4159720:-1:exon
so has part: feature:4157626-4157941:-1:exon
so has part: feature:4149419-4149503:-1:exon
so has part: feature:4147526-4147658:-1:exon
so has part: feature:4146082-4146271:-1:exon
so has part: feature:4143481-4143589:-1:exon
so has part: feature:4143151-4143182:-1:exon
so has part: feature:4142286-4142385:-1:exon
so has part: feature:4141748-4141813:-1:exon
so has part: feature:4141480-4141572:-1:exon
so has part: feature:4141202-4141333:-1:exon

XP_048476875.1
type: Protein
SIO_000068: ncbiprotein

position:4141202:-1
position: 4141202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159621-4159720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4157626-4157941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4149419-4149503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147526-4147658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4146082-4146271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4143481-4143589:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4143151-4143182:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4142286-4142385:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4141748-4141813:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4141480-4141572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4141202-4141333:-1:exon