Rhincodon typus isolate 14 chromosome 46, sRhiTyp1.1, whole genome shotgun sequence.
type: Entry
definition: Rhincodon typus isolate 14 chromosome 46, sRhiTyp1.1, whole genome shotgun sequence.
sequence version: NC_063377.1
sequence date: 2022-06-09
sequence: sequence
division: CON
label: NC_063377.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA842712
dblink: SAMN19519256
keyword: WGS
keyword: RefSeq
source: Rhincodon typus (whale shark)
organism: Rhincodon typus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038843.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 10821110
topology: linear
so has quality: SO_0000987
location: 1..10821110
location: region:1-10821110:1
RO_0002162: 259920

NC_063377
type: RefSeq
SIO_000068: refseq

PRJNA842712
type: BioProject
SIO_000068: bioproject

SAMN19519256
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10821110:1
position: 10821110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10821110:1:source
so part of: sequence
organism: Rhincodon typus
mol type: genomic DNA
isolate: 14
chromosome: 46
sex: male
tissue type: blood
dev stage: adult
collected by: 2018-05-24

259920
type: Taxonomy
SIO_000068: taxonomy

LOC125487894
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1140862..1151319
location: region:1140862-1151319:1
so has part: feature:1140862-1151319:1:exon
subclass of: SO_0000010

125487894
type: Gene
SIO_000068: ncbigene

position:1140862:1
position: 1140862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151319:1
position: 1151319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140862-1151319:1:exon

LOC125487894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487894
product: epidermal retinol dehydrogenase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048620476.1
SIO_010081: LOC125487894
subclass of: SO_0000673
so part of: LOC125487894
location: join(1140862..1141355,1150366..1150497,1151274..1151319)
location: region:1140862-1151319:1
so has part: feature:1140862-1141355:1:exon
so has part: feature:1150366-1150497:1:exon
so has part: feature:1151274-1151319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140862-1141355:1:exon

position:1141355:1
position: 1141355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1150366-1150497:1:exon

position:1150366:1
position: 1150366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150497:1
position: 1150497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1151274-1151319:1:exon

position:1151274:1
position: 1151274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal retinol dehydrogenase 2-like
translation: MNFLLESLVTLFLSLYYILEALVLLVVPVRRKNVSGEIVLVSGAGSGIGRYVALEFARLHATLVLWDINEEGNKETARQAREKGASGVYNYICDCSKKSSVYEVADKVKREVGDVSILINNAGIVTGKKFIESSDDLLEKTMEVNSLAHFWEKHVCLSYLPWN
SIO_010081: LOC125487894
subclass of: SO_0000673
so part of: LOC125487894
location: join(1141035..1141355,1150366..1150497,1151274..1151312)
location: region:1141035-1151312:1
so has part: feature:1141035-1141355:1:exon
so has part: feature:1150366-1150497:1:exon
so has part: feature:1151274-1151312:1:exon

XP_048476433.1
type: Protein
SIO_000068: ncbiprotein

position:1141035:1
position: 1141035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151312:1
position: 1151312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141035-1141355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1150366-1150497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151274-1151312:1:exon

LOC109936945
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1155515..1175226)
location: region:1155515-1175226:-1
so has part: feature:1155515-1175226:-1:exon
subclass of: SO_0000010

109936945
type: Gene
SIO_000068: ncbigene

position:1155515:-1
position: 1155515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175226:-1
position: 1175226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155515-1175226:-1:exon

LOC109936945
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936945
product: epidermal retinol dehydrogenase 2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620277.1
SIO_010081: LOC109936945
subclass of: SO_0000673
so part of: LOC109936945
location: complement(join(1155515..1155645,1164942..1165067,1166925..1167069,1174849..1174983,1175196..1175226))
location: region:1155515-1175226:-1
so has part: feature:1175196-1175226:-1:exon
so has part: feature:1174849-1174983:-1:exon
so has part: feature:1166925-1167069:-1:exon
so has part: feature:1164942-1165067:-1:exon
so has part: feature:1155515-1155645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1175196-1175226:-1:exon

position:1175196:-1
position: 1175196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1174849-1174983:-1:exon

position:1174849:-1
position: 1174849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174983:-1
position: 1174983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1166925-1167069:-1:exon

position:1166925:-1
position: 1166925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167069:-1
position: 1167069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1164942-1165067:-1:exon

position:1164942:-1
position: 1164942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165067:-1
position: 1165067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1155515-1155645:-1:exon

position:1155645:-1
position: 1155645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109936945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal retinol dehydrogenase 2-like
translation: MLNLKEQRAANYCSSKFAAIGFAESVALELLASGKNGIKTTIVCPYFINTGMFDGYYCSSKFAAIGFAESVALELLASGKNGIKTTIVCPYFINTGMFDGCKTKWAHLLPILDQNYTAKKITDAILRDQVLLVMPRSLYFMFAIKNLLPLKLGILLGHYFGVFDVMDNFKGRVKKD
SIO_010081: LOC109936945
subclass of: SO_0000673
so part of: LOC109936945
location: complement(join(1155552..1155645,1164942..1165067,1166925..1167069,1174849..1174983,1175196..1175226))
location: region:1155552-1175226:-1
so has part: feature:1175196-1175226:-1:exon
so has part: feature:1174849-1174983:-1:exon
so has part: feature:1166925-1167069:-1:exon
so has part: feature:1164942-1165067:-1:exon
so has part: feature:1155552-1155645:-1:exon

XP_048476234.1
type: Protein
SIO_000068: ncbiprotein

position:1155552:-1
position: 1155552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175196-1175226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174849-1174983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166925-1167069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164942-1165067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1155552-1155645:-1:exon

pfas
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pfas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4562066..4631596)
location: region:4562066-4631596:-1
so has part: feature:4562066-4631596:-1:exon
subclass of: SO_0000010

109919173
type: Gene
SIO_000068: ncbigene

position:4562066:-1
position: 4562066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4631596:-1
position: 4631596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4562066-4631596:-1:exon

pfas
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pfas
product: phosphoribosylformylglycinamidine synthase, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020519153.2
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562066..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404,4631520..4631596))
location: region:4562066-4631596:-1
so has part: feature:4631520-4631596:-1:exon
so has part: feature:4629269-4629404:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574874:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562066-4562594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4631520-4631596:-1:exon

position:4631520:-1
position: 4631520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4629269-4629404:-1:exon

position:4629269:-1
position: 4629269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4629404:-1
position: 4629404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4624514-4624649:-1:exon

position:4624514:-1
position: 4624514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4624649:-1
position: 4624649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4622357-4622462:-1:exon

position:4622357:-1
position: 4622357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4622462:-1
position: 4622462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4615212-4615401:-1:exon

position:4615212:-1
position: 4615212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4615401:-1
position: 4615401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4605660-4605765:-1:exon

position:4605660:-1
position: 4605660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4605765:-1
position: 4605765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4605240-4605380:-1:exon

position:4605240:-1
position: 4605240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4605380:-1
position: 4605380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4604828-4604952:-1:exon

position:4604828:-1
position: 4604828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604952:-1
position: 4604952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4604617-4604745:-1:exon

position:4604617:-1
position: 4604617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604745:-1
position: 4604745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4604305-4604436:-1:exon

position:4604305:-1
position: 4604305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604436:-1
position: 4604436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4604066-4604194:-1:exon

position:4604066:-1
position: 4604066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604194:-1
position: 4604194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4598227-4598300:-1:exon

position:4598227:-1
position: 4598227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4598300:-1
position: 4598300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4597907-4598063:-1:exon

position:4597907:-1
position: 4597907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4598063:-1
position: 4598063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4597299-4597360:-1:exon

position:4597299:-1
position: 4597299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4597360:-1
position: 4597360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4593289-4593450:-1:exon

position:4593289:-1
position: 4593289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4593450:-1
position: 4593450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4592610-4592720:-1:exon

position:4592610:-1
position: 4592610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4592720:-1
position: 4592720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4587452-4587583:-1:exon

position:4587452:-1
position: 4587452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4587583:-1
position: 4587583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4581985-4582215:-1:exon

position:4581985:-1
position: 4581985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4582215:-1
position: 4582215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4580322-4580502:-1:exon

position:4580322:-1
position: 4580322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4580502:-1
position: 4580502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4580001-4580084:-1:exon

position:4580001:-1
position: 4580001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4580084:-1
position: 4580084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4579060-4579215:-1:exon

position:4579060:-1
position: 4579060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4579215:-1
position: 4579215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4578854-4578973:-1:exon

position:4578854:-1
position: 4578854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4578973:-1
position: 4578973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4577103-4577248:-1:exon

position:4577103:-1
position: 4577103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4577248:-1
position: 4577248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4575059-4575269:-1:exon

position:4575059:-1
position: 4575059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4575269:-1
position: 4575269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4574780-4574874:-1:exon

position:4574780:-1
position: 4574780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4574874:-1
position: 4574874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4570443-4570554:-1:exon

position:4570443:-1
position: 4570443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4570554:-1
position: 4570554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4570008-4570166:-1:exon

position:4570008:-1
position: 4570008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4570166:-1
position: 4570166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4568855-4569007:-1:exon

position:4568855:-1
position: 4568855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4569007:-1
position: 4569007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4562066-4562594:-1:exon

position:4562594:-1
position: 4562594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pfas
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pfas
product: phosphoribosylformylglycinamidine synthase, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620490.1
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
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position:4631573:-1
position: 4631573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4631520-4631573:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4629709-4629818:-1:exon

position:4629709:-1
position: 4629709
reference: sequence
type: ReverseStrandPosition
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position:4629818:-1
position: 4629818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 8
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 12
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urn:…
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4562066-4562594:-1:exon

pfas
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pfas
product: phosphoribosylformylglycinamidine synthase, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620488.1
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
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location: region:4562066-4631566:-1
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position:4631566:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4631520-4631566:-1:exon

urn:…
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position:4631257:-1
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reference: sequence
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position:4631380:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
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urn:…
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urn:…
SIO_000300: 5
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:4604828-4604952:-1:exon

urn:…
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urn:…
SIO_000300: 20
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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urn:…
SIO_000300: 27
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4562066-4562594:-1:exon

pfas
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pfas
product: phosphoribosylformylglycinamidine synthase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620487.1
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562066..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574871,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404,4631381..4631513))
location: region:4562066-4631513:-1
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position:4631513:-1
position: 4631513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4631381-4631513:-1:exon

position:4631381:-1
position: 4631381
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:4629269-4629404:-1:exon

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urn:…
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urn:…
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urn:…
SIO_000300: 12
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urn:…
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SIO_000628: feature:4597907-4598063:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 18
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urn:…
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urn:…
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urn:…
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SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:4574780-4574871:-1:exon

position:4574871:-1
position: 4574871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4562066-4562594:-1:exon

pfas
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pfas
product: phosphoribosylformylglycinamidine synthase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620486.1
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562066..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404,4631381..4631513))
location: region:4562066-4631513:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:4631381-4631513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4629269-4629404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 24
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4562066-4562594:-1:exon

pfas
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pfas
product: phosphoribosylformylglycinamidine synthase, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620489.1
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562066..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404,4629709..4629818,4631381..4631479))
location: region:4562066-4631479:-1
so has part: feature:4631381-4631479:-1:exon
so has part: feature:4629709-4629818:-1:exon
so has part: feature:4629269-4629404:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574874:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562066-4562594:-1:exon

position:4631479:-1
position: 4631479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4631381-4631479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4629709-4629818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4629269-4629404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4622357-4622462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4605240-4605380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4604828-4604952:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4604617-4604745:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4604305-4604436:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4604066-4604194:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4598227-4598300:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4597907-4598063:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4597299-4597360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4593289-4593450:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4592610-4592720:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4587452-4587583:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4581985-4582215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4580322-4580502:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4580001-4580084:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4577103-4577248:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4562066-4562594:-1:exon

pfas
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pfas
product: phosphoribosylformylglycinamidine synthase, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620491.1
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562066..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629406,4631235..4631389))
location: region:4562066-4631389:-1
so has part: feature:4631235-4631389:-1:exon
so has part: feature:4629269-4629406:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574874:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562066-4562594:-1:exon

position:4631389:-1
position: 4631389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4631235-4631389:-1:exon

position:4631235:-1
position: 4631235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4629269-4629406:-1:exon

position:4629406:-1
position: 4629406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4622357-4622462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4605240-4605380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4604828-4604952:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4604617-4604745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4604305-4604436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4604066-4604194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4598227-4598300:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4597907-4598063:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4597299-4597360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4593289-4593450:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4592610-4592720:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4587452-4587583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4581985-4582215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4580322-4580502:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4580001-4580084:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4577103-4577248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4562066-4562594:-1:exon

pfas
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pfas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoribosylformylglycinamidine synthase isoform X3
translation: MREGGEIEMAVLHFYKSPTELPPVDLEILQSGNPHVGRIEHINWELCFNVNWTGATLPSPQDRQKLTWILQSPFSSKTISTEPFLRECDGDLLVEIGPRLNFSTAWSTNAVSICKSIGLTAVDRIECSCRYLLKVREPEKGVAAQCELLAAFYDRMTECIYEHPIESFCVSVRPAPVYEVDVVNGGKSALEKANQELGLAFDAWDLEYYTGLFRKVGRNPSSVECFDLAQSNSEHSRHWFFKGRLMIDGETKQESLFDLIMKTQDYSNKNNIIKFSDNSSAITGKVVKCLYPSNQSRASKVEKRETMRHVIFTAETHNFPTGVAPFSGATTGTGGRIRDIQCTGRGAHTIAGTAGYCFGNLLYPGYDLPWEDRTFAYPGNFARPLEIAIEASNGASDYGNKFGEPVLAGFARSFGMLLPNQERREWLKPIMFSAGIGTIEDQHIHKEQPDPEMEVVKIGGPVYRIGVGGGAASSIQVQGDNTAELDFGAVQRGDAEMEQKMNRALRACIESRDNNPICSIHDQGAGGNGNVLKELSEPAGATIYTSKFKVGDPTLSVLELWGAEYQESNALLMRSKDSAFLRAICDREKCPVDFVGKITGDGKIVLVDDWDTPVKAELNQQASHPVDLKLDWVLGKMPQKEFTLNRIKPDVKPLVLPDNLTVRDALSRVLRLPSVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSYFDTVGAATAIGEQPIKGLIDPAAGARMAIGEALANLMFARVTELSDVKCSANWMWPAKLPGEGAALYDACKAMCLTLSELGVAVDGGKDSLSMAARVGEETVKAPGSLVISVYAVCPDITCIVTPDLKNPHGQGQLLYVPVTPGQYRMGGGALAQCYSQLGNVCPDMDSPQHLVSCFRVTQQLLEERMLSAGHDVSDGGLLTCLLEMAIAGNCGMELDISNSDASVIELLFAEELGLVLEVSETAADQVSARYRAAGLQCWRIGSTSEQGPQSKITVRVNGEEILSERTATVRSWWEETSFRLERLQCNRACVEEEESSLMHRTAPQYRLCFQPANRLSLSTSLADLPQPRVAVIREEGSNGDREMVASLVMAGFQVWDVTMTDICAGMSLDSFRGVVFVGGFSYADVLGSAKGWAATVRFNPAARAEFSRFRSRRDTFSLGVCNGCQLMALLGWVASDIDSDPVDDGELRQGVLLTRNRSRRFESRFVTVTILESCSILLQGMEGSTLGIWVAHGEGYMQFESDSMLMRVSERNLAPIRYCDDSGVPTEKYPQNPNGSLLGIAALCSADGRHLAMMPHPERCTLLWQWPWMPQDWRQSLTSSPWLRMFQNAQEWCLQSL
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562284..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404,4631520..4631543))
location: region:4562284-4631543:-1
so has part: feature:4631520-4631543:-1:exon
so has part: feature:4629269-4629404:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574874:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562284-4562594:-1:exon

XP_020374742.2
type: Protein
SIO_000068: ncbiprotein

position:4562284:-1
position: 4562284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4631543:-1
position: 4631543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4631520-4631543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4629269-4629404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4622357-4622462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4605240-4605380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4604828-4604952:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4604617-4604745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4604305-4604436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4604066-4604194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4598227-4598300:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4597907-4598063:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4597299-4597360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4593289-4593450:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4592610-4592720:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4587452-4587583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4581985-4582215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4580322-4580502:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4580001-4580084:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4577103-4577248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4562284-4562594:-1:exon

pfas
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pfas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoribosylformylglycinamidine synthase isoform X2
translation: MARETDWSASADLQMAVLHFYKSPTELPPVDLEILQSGNPHVGRIEHINWELCFNVNWTGATLPSPQDRQKLTWILQSPFSSKTISTEPFLRECDGDLLVEIGPRLNFSTAWSTNAVSICKSIGLTAVDRIECSCRYLLKVREPEKGVAAQCELLAAFYDRMTECIYEHPIESFCVSVRPAPVYEVDVVNGGKSALEKANQELGLAFDAWDLEYYTGLFRKVGRNPSSVECFDLAQSNSEHSRHWFFKGRLMIDGETKQESLFDLIMKTQDYSNKNNIIKFSDNSSAITGKVVKCLYPSNQSRASKVEKRETMRHVIFTAETHNFPTGVAPFSGATTGTGGRIRDIQCTGRGAHTIAGTAGYCFGNLLYPGYDLPWEDRTFAYPGNFARPLEIAIEASNGASDYGNKFGEPVLAGFARSFGMLLPNQERREWLKPIMFSAGIGTIEDQHIHKEQPDPEMEVVKIGGPVYRIGVGGGAASSIQVQGDNTAELDFGAVQRGDAEMEQKMNRALRACIESRDNNPICSIHDQGAGGNGNVLKELSEPAGATIYTSKFKVGDPTLSVLELWGAEYQESNALLMRSKDSAFLRAICDREKCPVDFVGKITGDGKIVLVDDWDTPVKAELNQQASHPVDLKLDWVLGKMPQKEFTLNRIKPDVKPLVLPDNLTVRDALSRVLRLPSVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSYFDTVGAATAIGEQPIKGLIDPAAGARMAIGEALANLMFARVTELSDVKCSANWMWPAKLPGEGAALYDACKAMCLTLSELGVAVDGGKDSLSMAARVGEETVKAPGSLVISVYAVCPDITCIVTPDLKNPHGQGQLLYVPVTPGQYRMGGGALAQCYSQLGNVCPDMDSPQHLVSCFRVTQQLLEERMLSAGHDVSDGGLLTCLLEMAIAGNCGMELDISNSDASVIELLFAEELGLVLEVSETAADQVSARYRAAGLQCWRIGSTSEQGPQSKITVRVNGEEILSERTATVRSWWEETSFRLERLQCNRACVEEEESSLMHRTAPQYRLCFQPANRLSLSTSLDLPQPRVAVIREEGSNGDREMVASLVMAGFQVWDVTMTDICAGMSLDSFRGVVFVGGFSYADVLGSAKGWAATVRFNPAARAEFSRFRSRRDTFSLGVCNGCQLMALLGWVASDIDSDPVDDGELRQGVLLTRNRSRRFESRFVTVTILESCSILLQGMEGSTLGIWVAHGEGYMQFESDSMLMRVSERNLAPIRYCDDSGVPTEKYPQNPNGSLLGIAALCSADGRHLAMMPHPERCTLLWQWPWMPQDWRQSLTSSPWLRMFQNAQEWCLQSL
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562284..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574871,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404,4631381..4631422))
location: region:4562284-4631422:-1
so has part: feature:4631381-4631422:-1:exon
so has part: feature:4629269-4629404:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574871:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562284-4562594:-1:exon

XP_048476444.1
type: Protein
SIO_000068: ncbiprotein

position:4631422:-1
position: 4631422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4631381-4631422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4629269-4629404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4622357-4622462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4605240-4605380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4604828-4604952:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4604617-4604745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4604305-4604436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4604066-4604194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4598227-4598300:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4597907-4598063:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4597299-4597360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4593289-4593450:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4592610-4592720:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4587452-4587583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4581985-4582215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4580322-4580502:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4580001-4580084:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4577103-4577248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4574780-4574871:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4562284-4562594:-1:exon

pfas
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pfas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoribosylformylglycinamidine synthase isoform X1
translation: MARETDWSASADLQMAVLHFYKSPTELPPVDLEILQSGNPHVGRIEHINWELCFNVNWTGATLPSPQDRQKLTWILQSPFSSKTISTEPFLRECDGDLLVEIGPRLNFSTAWSTNAVSICKSIGLTAVDRIECSCRYLLKVREPEKGVAAQCELLAAFYDRMTECIYEHPIESFCVSVRPAPVYEVDVVNGGKSALEKANQELGLAFDAWDLEYYTGLFRKVGRNPSSVECFDLAQSNSEHSRHWFFKGRLMIDGETKQESLFDLIMKTQDYSNKNNIIKFSDNSSAITGKVVKCLYPSNQSRASKVEKRETMRHVIFTAETHNFPTGVAPFSGATTGTGGRIRDIQCTGRGAHTIAGTAGYCFGNLLYPGYDLPWEDRTFAYPGNFARPLEIAIEASNGASDYGNKFGEPVLAGFARSFGMLLPNQERREWLKPIMFSAGIGTIEDQHIHKEQPDPEMEVVKIGGPVYRIGVGGGAASSIQVQGDNTAELDFGAVQRGDAEMEQKMNRALRACIESRDNNPICSIHDQGAGGNGNVLKELSEPAGATIYTSKFKVGDPTLSVLELWGAEYQESNALLMRSKDSAFLRAICDREKCPVDFVGKITGDGKIVLVDDWDTPVKAELNQQASHPVDLKLDWVLGKMPQKEFTLNRIKPDVKPLVLPDNLTVRDALSRVLRLPSVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSYFDTVGAATAIGEQPIKGLIDPAAGARMAIGEALANLMFARVTELSDVKCSANWMWPAKLPGEGAALYDACKAMCLTLSELGVAVDGGKDSLSMAARVGEETVKAPGSLVISVYAVCPDITCIVTPDLKNPHGQGQLLYVPVTPGQYRMGGGALAQCYSQLGNVCPDMDSPQHLVSCFRVTQQLLEERMLSAGHDVSDGGLLTCLLEMAIAGNCGMELDISNSDASVIELLFAEELGLVLEVSETAADQVSARYRAAGLQCWRIGSTSEQGPQSKITVRVNGEEILSERTATVRSWWEETSFRLERLQCNRACVEEEESSLMHRTAPQYRLCFQPANRLSLSTSLADLPQPRVAVIREEGSNGDREMVASLVMAGFQVWDVTMTDICAGMSLDSFRGVVFVGGFSYADVLGSAKGWAATVRFNPAARAEFSRFRSRRDTFSLGVCNGCQLMALLGWVASDIDSDPVDDGELRQGVLLTRNRSRRFESRFVTVTILESCSILLQGMEGSTLGIWVAHGEGYMQFESDSMLMRVSERNLAPIRYCDDSGVPTEKYPQNPNGSLLGIAALCSADGRHLAMMPHPERCTLLWQWPWMPQDWRQSLTSSPWLRMFQNAQEWCLQSL
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562284..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404,4631381..4631422))
location: region:4562284-4631422:-1
so has part: feature:4631381-4631422:-1:exon
so has part: feature:4629269-4629404:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574874:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562284-4562594:-1:exon

XP_048476443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4631381-4631422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4629269-4629404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4622357-4622462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4605240-4605380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4604828-4604952:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4604617-4604745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4604305-4604436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4604066-4604194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4598227-4598300:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4597907-4598063:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4597299-4597360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4593289-4593450:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4592610-4592720:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4587452-4587583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4581985-4582215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4580322-4580502:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4580001-4580084:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4577103-4577248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4562284-4562594:-1:exon

pfas
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pfas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoribosylformylglycinamidine synthase isoform X4
translation: MAVLHFYKSPTELPPVDLEILQSGNPHVGRIEHINWELCFNVNWTGATLPSPQDRQKLTWILQSPFSSKTISTEPFLRECDGDLLVEIGPRLNFSTAWSTNAVSICKSIGLTAVDRIECSCRYLLKVREPEKGVAAQCELLAAFYDRMTECIYEHPIESFCVSVRPAPVYEVDVVNGGKSALEKANQELGLAFDAWDLEYYTGLFRKVGRNPSSVECFDLAQSNSEHSRHWFFKGRLMIDGETKQESLFDLIMKTQDYSNKNNIIKFSDNSSAITGKVVKCLYPSNQSRASKVEKRETMRHVIFTAETHNFPTGVAPFSGATTGTGGRIRDIQCTGRGAHTIAGTAGYCFGNLLYPGYDLPWEDRTFAYPGNFARPLEIAIEASNGASDYGNKFGEPVLAGFARSFGMLLPNQERREWLKPIMFSAGIGTIEDQHIHKEQPDPEMEVVKIGGPVYRIGVGGGAASSIQVQGDNTAELDFGAVQRGDAEMEQKMNRALRACIESRDNNPICSIHDQGAGGNGNVLKELSEPAGATIYTSKFKVGDPTLSVLELWGAEYQESNALLMRSKDSAFLRAICDREKCPVDFVGKITGDGKIVLVDDWDTPVKAELNQQASHPVDLKLDWVLGKMPQKEFTLNRIKPDVKPLVLPDNLTVRDALSRVLRLPSVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSYFDTVGAATAIGEQPIKGLIDPAAGARMAIGEALANLMFARVTELSDVKCSANWMWPAKLPGEGAALYDACKAMCLTLSELGVAVDGGKDSLSMAARVGEETVKAPGSLVISVYAVCPDITCIVTPDLKNPHGQGQLLYVPVTPGQYRMGGGALAQCYSQLGNVCPDMDSPQHLVSCFRVTQQLLEERMLSAGHDVSDGGLLTCLLEMAIAGNCGMELDISNSDASVIELLFAEELGLVLEVSETAADQVSARYRAAGLQCWRIGSTSEQGPQSKITVRVNGEEILSERTATVRSWWEETSFRLERLQCNRACVEEEESSLMHRTAPQYRLCFQPANRLSLSTSLADLPQPRVAVIREEGSNGDREMVASLVMAGFQVWDVTMTDICAGMSLDSFRGVVFVGGFSYADVLGSAKGWAATVRFNPAARAEFSRFRSRRDTFSLGVCNGCQLMALLGWVASDIDSDPVDDGELRQGVLLTRNRSRRFESRFVTVTILESCSILLQGMEGSTLGIWVAHGEGYMQFESDSMLMRVSERNLAPIRYCDDSGVPTEKYPQNPNGSLLGIAALCSADGRHLAMMPHPERCTLLWQWPWMPQDWRQSLTSSPWLRMFQNAQEWCLQSL
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562284..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404))
location: region:4562284-4629404:-1
so has part: feature:4629269-4629404:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574874:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562284-4562594:-1:exon

XP_048476445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4629269-4629404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4622357-4622462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4605240-4605380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4604828-4604952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4604617-4604745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4604305-4604436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4604066-4604194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4598227-4598300:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4597907-4598063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4597299-4597360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4593289-4593450:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4592610-4592720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4587452-4587583:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4581985-4582215:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4580322-4580502:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4580001-4580084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4577103-4577248:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4562284-4562594:-1:exon

pfas
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pfas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoribosylformylglycinamidine synthase isoform X4
translation: MAVLHFYKSPTELPPVDLEILQSGNPHVGRIEHINWELCFNVNWTGATLPSPQDRQKLTWILQSPFSSKTISTEPFLRECDGDLLVEIGPRLNFSTAWSTNAVSICKSIGLTAVDRIECSCRYLLKVREPEKGVAAQCELLAAFYDRMTECIYEHPIESFCVSVRPAPVYEVDVVNGGKSALEKANQELGLAFDAWDLEYYTGLFRKVGRNPSSVECFDLAQSNSEHSRHWFFKGRLMIDGETKQESLFDLIMKTQDYSNKNNIIKFSDNSSAITGKVVKCLYPSNQSRASKVEKRETMRHVIFTAETHNFPTGVAPFSGATTGTGGRIRDIQCTGRGAHTIAGTAGYCFGNLLYPGYDLPWEDRTFAYPGNFARPLEIAIEASNGASDYGNKFGEPVLAGFARSFGMLLPNQERREWLKPIMFSAGIGTIEDQHIHKEQPDPEMEVVKIGGPVYRIGVGGGAASSIQVQGDNTAELDFGAVQRGDAEMEQKMNRALRACIESRDNNPICSIHDQGAGGNGNVLKELSEPAGATIYTSKFKVGDPTLSVLELWGAEYQESNALLMRSKDSAFLRAICDREKCPVDFVGKITGDGKIVLVDDWDTPVKAELNQQASHPVDLKLDWVLGKMPQKEFTLNRIKPDVKPLVLPDNLTVRDALSRVLRLPSVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSYFDTVGAATAIGEQPIKGLIDPAAGARMAIGEALANLMFARVTELSDVKCSANWMWPAKLPGEGAALYDACKAMCLTLSELGVAVDGGKDSLSMAARVGEETVKAPGSLVISVYAVCPDITCIVTPDLKNPHGQGQLLYVPVTPGQYRMGGGALAQCYSQLGNVCPDMDSPQHLVSCFRVTQQLLEERMLSAGHDVSDGGLLTCLLEMAIAGNCGMELDISNSDASVIELLFAEELGLVLEVSETAADQVSARYRAAGLQCWRIGSTSEQGPQSKITVRVNGEEILSERTATVRSWWEETSFRLERLQCNRACVEEEESSLMHRTAPQYRLCFQPANRLSLSTSLADLPQPRVAVIREEGSNGDREMVASLVMAGFQVWDVTMTDICAGMSLDSFRGVVFVGGFSYADVLGSAKGWAATVRFNPAARAEFSRFRSRRDTFSLGVCNGCQLMALLGWVASDIDSDPVDDGELRQGVLLTRNRSRRFESRFVTVTILESCSILLQGMEGSTLGIWVAHGEGYMQFESDSMLMRVSERNLAPIRYCDDSGVPTEKYPQNPNGSLLGIAALCSADGRHLAMMPHPERCTLLWQWPWMPQDWRQSLTSSPWLRMFQNAQEWCLQSL
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562284..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404))
location: region:4562284-4629404:-1
so has part: feature:4629269-4629404:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574874:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562284-4562594:-1:exon

XP_048476446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4629269-4629404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4622357-4622462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4605240-4605380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4604828-4604952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4604617-4604745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4604305-4604436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4604066-4604194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4598227-4598300:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4597907-4598063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4597299-4597360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4593289-4593450:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4592610-4592720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4587452-4587583:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4581985-4582215:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4580322-4580502:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4580001-4580084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4577103-4577248:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4562284-4562594:-1:exon

pfas
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pfas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoribosylformylglycinamidine synthase isoform X4
translation: MAVLHFYKSPTELPPVDLEILQSGNPHVGRIEHINWELCFNVNWTGATLPSPQDRQKLTWILQSPFSSKTISTEPFLRECDGDLLVEIGPRLNFSTAWSTNAVSICKSIGLTAVDRIECSCRYLLKVREPEKGVAAQCELLAAFYDRMTECIYEHPIESFCVSVRPAPVYEVDVVNGGKSALEKANQELGLAFDAWDLEYYTGLFRKVGRNPSSVECFDLAQSNSEHSRHWFFKGRLMIDGETKQESLFDLIMKTQDYSNKNNIIKFSDNSSAITGKVVKCLYPSNQSRASKVEKRETMRHVIFTAETHNFPTGVAPFSGATTGTGGRIRDIQCTGRGAHTIAGTAGYCFGNLLYPGYDLPWEDRTFAYPGNFARPLEIAIEASNGASDYGNKFGEPVLAGFARSFGMLLPNQERREWLKPIMFSAGIGTIEDQHIHKEQPDPEMEVVKIGGPVYRIGVGGGAASSIQVQGDNTAELDFGAVQRGDAEMEQKMNRALRACIESRDNNPICSIHDQGAGGNGNVLKELSEPAGATIYTSKFKVGDPTLSVLELWGAEYQESNALLMRSKDSAFLRAICDREKCPVDFVGKITGDGKIVLVDDWDTPVKAELNQQASHPVDLKLDWVLGKMPQKEFTLNRIKPDVKPLVLPDNLTVRDALSRVLRLPSVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSYFDTVGAATAIGEQPIKGLIDPAAGARMAIGEALANLMFARVTELSDVKCSANWMWPAKLPGEGAALYDACKAMCLTLSELGVAVDGGKDSLSMAARVGEETVKAPGSLVISVYAVCPDITCIVTPDLKNPHGQGQLLYVPVTPGQYRMGGGALAQCYSQLGNVCPDMDSPQHLVSCFRVTQQLLEERMLSAGHDVSDGGLLTCLLEMAIAGNCGMELDISNSDASVIELLFAEELGLVLEVSETAADQVSARYRAAGLQCWRIGSTSEQGPQSKITVRVNGEEILSERTATVRSWWEETSFRLERLQCNRACVEEEESSLMHRTAPQYRLCFQPANRLSLSTSLADLPQPRVAVIREEGSNGDREMVASLVMAGFQVWDVTMTDICAGMSLDSFRGVVFVGGFSYADVLGSAKGWAATVRFNPAARAEFSRFRSRRDTFSLGVCNGCQLMALLGWVASDIDSDPVDDGELRQGVLLTRNRSRRFESRFVTVTILESCSILLQGMEGSTLGIWVAHGEGYMQFESDSMLMRVSERNLAPIRYCDDSGVPTEKYPQNPNGSLLGIAALCSADGRHLAMMPHPERCTLLWQWPWMPQDWRQSLTSSPWLRMFQNAQEWCLQSL
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562284..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404))
location: region:4562284-4629404:-1
so has part: feature:4629269-4629404:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574874:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562284-4562594:-1:exon

XP_048476447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4629269-4629404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4622357-4622462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4605240-4605380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4604828-4604952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4604617-4604745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4604305-4604436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4604066-4604194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4598227-4598300:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4597907-4598063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4597299-4597360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4593289-4593450:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4592610-4592720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4587452-4587583:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4581985-4582215:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4580322-4580502:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4580001-4580084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4577103-4577248:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4562284-4562594:-1:exon

pfas
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pfas
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoribosylformylglycinamidine synthase isoform X4
translation: MAVLHFYKSPTELPPVDLEILQSGNPHVGRIEHINWELCFNVNWTGATLPSPQDRQKLTWILQSPFSSKTISTEPFLRECDGDLLVEIGPRLNFSTAWSTNAVSICKSIGLTAVDRIECSCRYLLKVREPEKGVAAQCELLAAFYDRMTECIYEHPIESFCVSVRPAPVYEVDVVNGGKSALEKANQELGLAFDAWDLEYYTGLFRKVGRNPSSVECFDLAQSNSEHSRHWFFKGRLMIDGETKQESLFDLIMKTQDYSNKNNIIKFSDNSSAITGKVVKCLYPSNQSRASKVEKRETMRHVIFTAETHNFPTGVAPFSGATTGTGGRIRDIQCTGRGAHTIAGTAGYCFGNLLYPGYDLPWEDRTFAYPGNFARPLEIAIEASNGASDYGNKFGEPVLAGFARSFGMLLPNQERREWLKPIMFSAGIGTIEDQHIHKEQPDPEMEVVKIGGPVYRIGVGGGAASSIQVQGDNTAELDFGAVQRGDAEMEQKMNRALRACIESRDNNPICSIHDQGAGGNGNVLKELSEPAGATIYTSKFKVGDPTLSVLELWGAEYQESNALLMRSKDSAFLRAICDREKCPVDFVGKITGDGKIVLVDDWDTPVKAELNQQASHPVDLKLDWVLGKMPQKEFTLNRIKPDVKPLVLPDNLTVRDALSRVLRLPSVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSYFDTVGAATAIGEQPIKGLIDPAAGARMAIGEALANLMFARVTELSDVKCSANWMWPAKLPGEGAALYDACKAMCLTLSELGVAVDGGKDSLSMAARVGEETVKAPGSLVISVYAVCPDITCIVTPDLKNPHGQGQLLYVPVTPGQYRMGGGALAQCYSQLGNVCPDMDSPQHLVSCFRVTQQLLEERMLSAGHDVSDGGLLTCLLEMAIAGNCGMELDISNSDASVIELLFAEELGLVLEVSETAADQVSARYRAAGLQCWRIGSTSEQGPQSKITVRVNGEEILSERTATVRSWWEETSFRLERLQCNRACVEEEESSLMHRTAPQYRLCFQPANRLSLSTSLADLPQPRVAVIREEGSNGDREMVASLVMAGFQVWDVTMTDICAGMSLDSFRGVVFVGGFSYADVLGSAKGWAATVRFNPAARAEFSRFRSRRDTFSLGVCNGCQLMALLGWVASDIDSDPVDDGELRQGVLLTRNRSRRFESRFVTVTILESCSILLQGMEGSTLGIWVAHGEGYMQFESDSMLMRVSERNLAPIRYCDDSGVPTEKYPQNPNGSLLGIAALCSADGRHLAMMPHPERCTLLWQWPWMPQDWRQSLTSSPWLRMFQNAQEWCLQSL
SIO_010081: pfas
subclass of: SO_0000673
so part of: pfas
location: complement(join(4562284..4562594,4568855..4569007,4570008..4570166,4570443..4570554,4574780..4574874,4575059..4575269,4577103..4577248,4578854..4578973,4579060..4579215,4580001..4580084,4580322..4580502,4581985..4582215,4587452..4587583,4592610..4592720,4593289..4593450,4597299..4597360,4597907..4598063,4598227..4598300,4604066..4604194,4604305..4604436,4604617..4604745,4604828..4604952,4605240..4605380,4605660..4605765,4615212..4615401,4622357..4622462,4624514..4624649,4629269..4629404))
location: region:4562284-4629404:-1
so has part: feature:4629269-4629404:-1:exon
so has part: feature:4624514-4624649:-1:exon
so has part: feature:4622357-4622462:-1:exon
so has part: feature:4615212-4615401:-1:exon
so has part: feature:4605660-4605765:-1:exon
so has part: feature:4605240-4605380:-1:exon
so has part: feature:4604828-4604952:-1:exon
so has part: feature:4604617-4604745:-1:exon
so has part: feature:4604305-4604436:-1:exon
so has part: feature:4604066-4604194:-1:exon
so has part: feature:4598227-4598300:-1:exon
so has part: feature:4597907-4598063:-1:exon
so has part: feature:4597299-4597360:-1:exon
so has part: feature:4593289-4593450:-1:exon
so has part: feature:4592610-4592720:-1:exon
so has part: feature:4587452-4587583:-1:exon
so has part: feature:4581985-4582215:-1:exon
so has part: feature:4580322-4580502:-1:exon
so has part: feature:4580001-4580084:-1:exon
so has part: feature:4579060-4579215:-1:exon
so has part: feature:4578854-4578973:-1:exon
so has part: feature:4577103-4577248:-1:exon
so has part: feature:4575059-4575269:-1:exon
so has part: feature:4574780-4574874:-1:exon
so has part: feature:4570443-4570554:-1:exon
so has part: feature:4570008-4570166:-1:exon
so has part: feature:4568855-4569007:-1:exon
so has part: feature:4562284-4562594:-1:exon

XP_048476448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4629269-4629404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4624514-4624649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4622357-4622462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4615212-4615401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4605660-4605765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4605240-4605380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4604828-4604952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4604617-4604745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4604305-4604436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4604066-4604194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4598227-4598300:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4597907-4598063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4597299-4597360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4593289-4593450:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4592610-4592720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4587452-4587583:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4581985-4582215:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4580322-4580502:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4580001-4580084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4579060-4579215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4578854-4578973:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4577103-4577248:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4575059-4575269:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4574780-4574874:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4570443-4570554:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4570008-4570166:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4568855-4569007:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4562284-4562594:-1:exon

LOC125487896
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4649351..4769664)
location: region:4649351-4769664:-1
so has part: feature:4649351-4769664:-1:exon
subclass of: SO_0000010

125487896
type: Gene
SIO_000068: ncbigene

position:4649351:-1
position: 4649351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4769664:-1
position: 4769664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4649351-4769664:-1:exon

LOC125487896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487896
product: uncharacterized LOC125487896
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620493.1
SIO_010081: LOC125487896
subclass of: SO_0000673
so part of: LOC125487896
location: complement(join(4649351..4649753,4655594..4655679,4658620..4658715,4660634..4660729,4669811..4669972,4670052..4670128,4670585..4670729,4687865..4688029,4688124..4688200,4688319..4688463,4692080..4692129,4725841..4725937,4769633..4769664))
location: region:4649351-4769664:-1
so has part: feature:4769633-4769664:-1:exon
so has part: feature:4725841-4725937:-1:exon
so has part: feature:4692080-4692129:-1:exon
so has part: feature:4688319-4688463:-1:exon
so has part: feature:4688124-4688200:-1:exon
so has part: feature:4687865-4688029:-1:exon
so has part: feature:4670585-4670729:-1:exon
so has part: feature:4670052-4670128:-1:exon
so has part: feature:4669811-4669972:-1:exon
so has part: feature:4660634-4660729:-1:exon
so has part: feature:4658620-4658715:-1:exon
so has part: feature:4655594-4655679:-1:exon
so has part: feature:4649351-4649753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4769633-4769664:-1:exon

position:4769633:-1
position: 4769633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4725841-4725937:-1:exon

position:4725841:-1
position: 4725841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4725937:-1
position: 4725937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4692080-4692129:-1:exon

position:4692080:-1
position: 4692080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4692129:-1
position: 4692129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4688319-4688463:-1:exon

position:4688319:-1
position: 4688319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4688463:-1
position: 4688463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4688124-4688200:-1:exon

position:4688124:-1
position: 4688124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4688200:-1
position: 4688200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4687865-4688029:-1:exon

position:4687865:-1
position: 4687865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4688029:-1
position: 4688029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4670585-4670729:-1:exon

position:4670585:-1
position: 4670585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4670729:-1
position: 4670729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4670052-4670128:-1:exon

position:4670052:-1
position: 4670052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4670128:-1
position: 4670128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4669811-4669972:-1:exon

position:4669811:-1
position: 4669811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4669972:-1
position: 4669972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4660634-4660729:-1:exon

position:4660634:-1
position: 4660634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4660729:-1
position: 4660729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4658620-4658715:-1:exon

position:4658620:-1
position: 4658620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4658715:-1
position: 4658715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4655594-4655679:-1:exon

position:4655594:-1
position: 4655594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4655679:-1
position: 4655679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4649351-4649753:-1:exon

position:4649753:-1
position: 4649753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125487896
translation: MRILLLLLGYLIADSALTDPCVNYTTLNQSWRSIDCTETECSGQLMCDNVLSAGWYKFQSSGGWRIPDTVVTGRQCSTRATGWLQGSHPTVEQGEVTRKACFNLDGNRCHWNREIKIKNCSNYFVYWLQPTPNCDAAYCTVVDLDHSDPCEDHIVLDQPWRNKNCENTECSGMLMCDTNTNYGWYRFKSSGGWKMSETIIPTHRCSAYSTAWLQGSHPDRVDGEVIRTICIHWNGNPCYWVHEIKVKNCASFFVYELKSLFYCAAYCTDPDSAPTHLPEEQSTWQTFEQSSLMPTGTATSGPESAPTHLPEEQSTWQSFEQSSLLPTGTKTSDIQYTWINVTIISKVDLEEDTAKRIANATVQRMVNEQAGTETELELEDVRCWAVNYLEA
SIO_010081: LOC125487896
subclass of: SO_0000673
so part of: LOC125487896
location: complement(join(4649661..4649753,4655594..4655679,4658620..4658715,4660634..4660729,4669811..4669972,4670052..4670128,4670585..4670729,4687865..4688029,4688124..4688200,4688319..4688463,4692080..4692113))
location: region:4649661-4692113:-1
so has part: feature:4692080-4692113:-1:exon
so has part: feature:4688319-4688463:-1:exon
so has part: feature:4688124-4688200:-1:exon
so has part: feature:4687865-4688029:-1:exon
so has part: feature:4670585-4670729:-1:exon
so has part: feature:4670052-4670128:-1:exon
so has part: feature:4669811-4669972:-1:exon
so has part: feature:4660634-4660729:-1:exon
so has part: feature:4658620-4658715:-1:exon
so has part: feature:4655594-4655679:-1:exon
so has part: feature:4649661-4649753:-1:exon

XP_048476450.1
type: Protein
SIO_000068: ncbiprotein

position:4649661:-1
position: 4649661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4692113:-1
position: 4692113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4692080-4692113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4688319-4688463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4688124-4688200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4687865-4688029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4670585-4670729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4670052-4670128:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4669811-4669972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4660634-4660729:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4658620-4658715:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4655594-4655679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4649661-4649753:-1:exon

LOC109938559
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109938559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4732857..4798126)
location: region:4732857-4798126:-1
so has part: feature:4732857-4798126:-1:exon
subclass of: SO_0000010

109938559
type: Gene
SIO_000068: ncbigene

position:4732857:-1
position: 4732857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4798126:-1
position: 4798126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4732857-4798126:-1:exon

LOC109938559
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109938559
product: oocyte zinc finger protein XlCOF15-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007266146.1
SIO_010081: LOC109938559
so part of: LOC109938559
location: complement(join(4732857..4733120,4788591..4790617,4798091..4798126))
location: region:4732857-4798126:-1
so has part: feature:4798091-4798126:-1:exon
so has part: feature:4788591-4790617:-1:exon
so has part: feature:4732857-4733120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4798091-4798126:-1:exon

position:4798091:-1
position: 4798091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4788591-4790617:-1:exon

position:4788591:-1
position: 4788591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4790617:-1
position: 4790617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4732857-4733120:-1:exon

position:4733120:-1
position: 4733120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109919695
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109919695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4760277..4766167)
location: region:4760277-4766167:-1
so has part: feature:4760277-4766167:-1:exon
subclass of: SO_0000010

109919695
type: Gene
SIO_000068: ncbigene

position:4760277:-1
position: 4760277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4766167:-1
position: 4766167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4760277-4766167:-1:exon

LOC109919695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919695
product: oocyte zinc finger protein XlCOF15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048620495.1
SIO_010081: LOC109919695
subclass of: SO_0000673
so part of: LOC109919695
location: complement(join(4760277..4762949,4765929..4766167))
location: region:4760277-4766167:-1
so has part: feature:4765929-4766167:-1:exon
so has part: feature:4760277-4762949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4765929-4766167:-1:exon

position:4765929:-1
position: 4765929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4760277-4762949:-1:exon

position:4762949:-1
position: 4762949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109919695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF15-like
translation: MAKPWICGDCGKGYSYPCQLETHRRSHTGERPFTCPVCGKGFTQSCTLHTHQRVHTGERPFLCLYCGKRFNASSNLLTHQRVHSDHRPFKCPDCEKSFKSKKDLLRHQRTHTGERPFTCSVCEKGFVQPSHLLRHQRFHTGERPFTCSECGQRFTVPSDLLTHQRIHTGERPFVCSVCGKAFTQLSSLNTHQLVHSDQKPFQCPDCEKKFKSKWNLLSHQRSHTGERPFTCAVCGKGFTQSNNLLKHQRIHSQQQV
SIO_010081: LOC109919695
subclass of: SO_0000673
so part of: LOC109919695
location: complement(4761432..4762202)
location: region:4761432-4762202:-1
so has part: feature:4761432-4762202:-1:exon

XP_048476452.1
type: Protein
SIO_000068: ncbiprotein

position:4761432:-1
position: 4761432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4762202:-1
position: 4762202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4761432-4762202:-1:exon

LOC109938559
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109938559
product: oocyte zinc finger protein XlCOF15-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007266147.1
SIO_010081: LOC109938559
so part of: LOC109938559
location: complement(join(4770217..4770315,4788591..4790617,4798091..4798126))
location: region:4770217-4798126:-1
so has part: feature:4798091-4798126:-1:exon
so has part: feature:4788591-4790617:-1:exon
so has part: feature:4770217-4770315:-1:exon

position:4770217:-1
position: 4770217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4798091-4798126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4788591-4790617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4770217-4770315:-1:exon

position:4770315:-1
position: 4770315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109938559
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109938559
product: oocyte zinc finger protein XlCOF15-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007266145.1
SIO_010081: LOC109938559
so part of: LOC109938559
location: complement(join(4785911..4786592,4788591..4790617,4798091..4798126))
location: region:4785911-4798126:-1
so has part: feature:4798091-4798126:-1:exon
so has part: feature:4788591-4790617:-1:exon
so has part: feature:4785911-4786592:-1:exon

position:4785911:-1
position: 4785911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4798091-4798126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4788591-4790617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4785911-4786592:-1:exon

position:4786592:-1
position: 4786592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109938559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109938559
product: oocyte zinc finger protein XlCOF15-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048620494.1
SIO_010081: LOC109938559
subclass of: SO_0000673
so part of: LOC109938559
location: complement(join(4788204..4790617,4798091..4798126))
location: region:4788204-4798126:-1
so has part: feature:4798091-4798126:-1:exon
so has part: feature:4788204-4790617:-1:exon

position:4788204:-1
position: 4788204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4798091-4798126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4788204-4790617:-1:exon

LOC109938559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109938559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF15-like
translation: MAKPWICGDCGKAYSYPCQLETHRRSHTGERPFTCSVCGKGFTQSCTLQRHQRIHTGERPFLCLYCGKRFNASSNLLTHQRVHSDHRPFKCPDCEKSFKSKKDLLRHQRTHTGERPFICSVCEKGFVLTTHLLRHQRFHTGERPFTCSECGQRFTVPSDLLTHQRIHTGERPFVCSVCGKAFTHLSSLNTHQLVHSDQKPFQCPDCEKKFKSKWNLLSHQRSHTGERPFTCAVCGKGFAQSNKLLRHQRIHSQQQGFDSAGIAGVNLIQN
SIO_010081: LOC109938559
subclass of: SO_0000673
so part of: LOC109938559
location: complement(4789055..4789867)
location: region:4789055-4789867:-1
so has part: feature:4789055-4789867:-1:exon

XP_048476451.1
type: Protein
SIO_000068: ncbiprotein

position:4789055:-1
position: 4789055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4789867:-1
position: 4789867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4789055-4789867:-1:exon

LOC109932072
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109932072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4819974..4828118)
location: region:4819974-4828118:-1
so has part: feature:4819974-4828118:-1:exon
subclass of: SO_0000010

109932072
type: Gene
SIO_000068: ncbigene

position:4819974:-1
position: 4819974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4828118:-1
position: 4828118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4819974-4828118:-1:exon

LOC109932072
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932072
product: oocyte zinc finger protein XlCOF15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_048620412.1
SIO_010081: LOC109932072
subclass of: SO_0000673
so part of: LOC109932072
location: complement(join(4819974..4822257,4827965..4828118))
location: region:4819974-4828118:-1
so has part: feature:4827965-4828118:-1:exon
so has part: feature:4819974-4822257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4827965-4828118:-1:exon

position:4827965:-1
position: 4827965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4819974-4822257:-1:exon

position:4822257:-1
position: 4822257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109932072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF15-like
translation: MHTGERPFTCSVCEKGFILTTHLLRHQRFHTGERPFTCSECGQRFTVASDLLTHQRIHTGERPFVCSVCGKAFTHLSSLNTHQLVHSDQKPFQCPDCEKKFKSKWNLLSHRRSHTGERPFTCAVCGKGFAQSNKLLRHQHIHSQQGFDTAGIAEVNLIQN
SIO_010081: LOC109932072
subclass of: SO_0000673
so part of: LOC109932072
location: complement(4820705..4821187)
location: region:4820705-4821187:-1
so has part: feature:4820705-4821187:-1:exon

XP_048476369.1
type: Protein
SIO_000068: ncbiprotein

position:4820705:-1
position: 4820705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4821187:-1
position: 4821187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4820705-4821187:-1:exon

LOC109932070
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109932070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4834124..4844830
location: region:4834124-4844830:1
so has part: feature:4834124-4844830:1:exon
subclass of: SO_0000010

109932070
type: Gene
SIO_000068: ncbigene

position:4834124:1
position: 4834124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4844830:1
position: 4844830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4834124-4844830:1:exon

LOC109932070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932070
product: gastrula zinc finger protein XlCGF64.1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_020531317.2
SIO_010081: LOC109932070
subclass of: SO_0000673
so part of: LOC109932070
location: join(4834124..4834205,4843743..4843848,4844188..4844830)
location: region:4834124-4844830:1
so has part: feature:4834124-4834205:1:exon
so has part: feature:4843743-4843848:1:exon
so has part: feature:4844188-4844830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4834124-4834205:1:exon

position:4834205:1
position: 4834205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4843743-4843848:1:exon

position:4843743:1
position: 4843743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4843848:1
position: 4843848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4844188-4844830:1:exon

position:4844188:1
position: 4844188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109932070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF64.1-like
translation: MRSSREERRVLSMRRGSRSAHIRQAAAVTQFIRTQDCRSLIVEKKGLSIGKGFNRQCAWNSTDCPECGKRFAQLAHLRTHQRIHTDEKPFNCCECGGWFKTSEELTTHQLIHTDKPFCCSQCGERFQQSSELLGHQWVHTGERPFTCSVCGQGFIQSSDLRAHQRGHAKESPYICSECGTNFMNAPKLLRHKWVHSEEKPFNCSVCGKGFIYPSLLESHIRSHTGDRPFICWRCGKGFTRLSSLQIHQHVRTGERPFKCSGCRNTFKNSAELIKRR
SIO_010081: LOC109932070
subclass of: SO_0000673
so part of: LOC109932070
location: join(4834124..4834205,4843743..4843848,4844188..4844830)
location: region:4834124-4844830:1
so has part: feature:4834124-4834205:1:exon
so has part: feature:4843743-4843848:1:exon
so has part: feature:4844188-4844830:1:exon

XP_020386906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4834124-4834205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4843743-4843848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4844188-4844830:1:exon

LOC109932069
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109932069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4844903..4845358
location: region:4844903-4845358:1
so has part: feature:4844903-4845358:1:exon
subclass of: SO_0000010

109932069
type: Gene
SIO_000068: ncbigene

position:4844903:1
position: 4844903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4845358:1
position: 4845358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4844903-4845358:1:exon

LOC109932069
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932069
product: gastrula zinc finger protein XlCGF71.1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_020531316.2
SIO_010081: LOC109932069
subclass of: SO_0000673
so part of: LOC109932069
location: 4844903..4845358
location: region:4844903-4845358:1
so has part: feature:4844903-4845358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4844903-4845358:1:exon

LOC109932069
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF71.1-like
translation: MHEQVHTGKSPFACSVCRKRFTHSSNLLMHQRIHDREWPFSRIDCGKEFSKTCRLLRHQGIHTRERPYTYSECGKGFTNSSDLLAHQRTCTGQRPFTCSECEKGFSHTSSLLCTSGFTPGRHYSLARCVARHSFSQPIFRGTSRFTSNCRG
SIO_010081: LOC109932069
subclass of: SO_0000673
so part of: LOC109932069
location: 4844903..4845358
location: region:4844903-4845358:1
so has part: feature:4844903-4845358:1:exon

XP_020386905.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4844903-4845358:1:exon

LOC125487840
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4889881..4894277
location: region:4889881-4894277:1
so has part: feature:4889881-4894277:1:exon
subclass of: SO_0000010

125487840
type: Gene
SIO_000068: ncbigene

position:4889881:1
position: 4889881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4894277:1
position: 4894277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4889881-4894277:1:exon

LOC125487840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487840
product: uncharacterized LOC125487840
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048620278.1
SIO_010081: LOC125487840
subclass of: SO_0000673
so part of: LOC125487840
location: join(4889881..4889923,4890785..4891123,4891211..4891510,4892732..4892845,4892985..4893043,4894233..4894277)
location: region:4889881-4894277:1
so has part: feature:4889881-4889923:1:exon
so has part: feature:4890785-4891123:1:exon
so has part: feature:4891211-4891510:1:exon
so has part: feature:4892732-4892845:1:exon
so has part: feature:4892985-4893043:1:exon
so has part: feature:4894233-4894277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4889881-4889923:1:exon

position:4889923:1
position: 4889923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4890785-4891123:1:exon

position:4890785:1
position: 4890785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4891123:1
position: 4891123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4891211-4891510:1:exon

position:4891211:1
position: 4891211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4891510:1
position: 4891510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4892732-4892845:1:exon

position:4892732:1
position: 4892732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4892845:1
position: 4892845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4892985-4893043:1:exon

position:4892985:1
position: 4892985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4893043:1
position: 4893043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4894233-4894277:1:exon

position:4894233:1
position: 4894233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125487840
translation: MNIATLCTLANLLSAAVPQTALLQTPALQSVYVGSTVRVNCHTGWYAVRGVHWYTQKVRENLQLVYIVRTLSGVAGRFSGEINDNSTTYTLVIHNVQRNDSGLYSCAGRKSHLHPFIFGKGSILLIAGTPTVILLSPSPNETFSMETVPLMCLVSNMISDTLTIDWNVSTWNAESWRDSVTIDSAGANSIRSHIRVPAEAWKNGITCACWVQLNSTTILSESASYHKEQPEFPCLLIFYGSSSVLILLVMMFTVSVVWSCRNSDSGNWNTEKKSTHFRPRDTKPETLYAHLAFTEEQIL
SIO_010081: LOC125487840
subclass of: SO_0000673
so part of: LOC125487840
location: join(4889881..4889923,4890785..4891123,4891211..4891510,4892732..4892845,4892985..4893043,4894233..4894277)
location: region:4889881-4894277:1
so has part: feature:4889881-4889923:1:exon
so has part: feature:4890785-4891123:1:exon
so has part: feature:4891211-4891510:1:exon
so has part: feature:4892732-4892845:1:exon
so has part: feature:4892985-4893043:1:exon
so has part: feature:4894233-4894277:1:exon

XP_048476235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4889881-4889923:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4890785-4891123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4891211-4891510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4892732-4892845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4892985-4893043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4894233-4894277:1:exon

LOC109915963
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109915963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4951381..4957048
location: region:4951381-4957048:1
so has part: feature:4951381-4957048:1:exon
subclass of: SO_0000010

109915963
type: Gene
SIO_000068: ncbigene

position:4951381:1
position: 4951381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4957048:1
position: 4957048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4951381-4957048:1:exon

LOC109915963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109915963
product: uncharacterized LOC109915963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 13% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020515648.2
SIO_010081: LOC109915963
subclass of: SO_0000673
so part of: LOC109915963
location: join(4951381..4951423,4951955..4952293,4952381..4952683,4956026..4956139,4956282..4956340,4956970..4957048)
location: region:4951381-4957048:1
so has part: feature:4951381-4951423:1:exon
so has part: feature:4951955-4952293:1:exon
so has part: feature:4952381-4952683:1:exon
so has part: feature:4956026-4956139:1:exon
so has part: feature:4956282-4956340:1:exon
so has part: feature:4956970-4957048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4951381-4951423:1:exon

position:4951423:1
position: 4951423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4951955-4952293:1:exon

position:4951955:1
position: 4951955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4952293:1
position: 4952293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4952381-4952683:1:exon

position:4952381:1
position: 4952381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4952683:1
position: 4952683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4956026-4956139:1:exon

position:4956026:1
position: 4956026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4956139:1
position: 4956139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4956282-4956340:1:exon

position:4956282:1
position: 4956282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4956340:1
position: 4956340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4956970-4957048:1:exon

position:4956970:1
position: 4956970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109915963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109915963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109915963
translation: MNVLPLCTLFQLLSVTVPQTIVLQMPALQTVSIGNTVKLHCHTGWLAYDAVFWYKQQLRERVQLVYTVSKHFPPVGRFSGEVNDYSTHYTLVIRNVQRNDSGLYYCASRNEYLNPLVFGNGSLVLIIGPPNVILLSPLLDEMFSLETIPLMCLVSNVISDSFPIDWNISTWDAEAWTDSVTMDSAMAHSLISHIRVPAEAWKHGAVCTCSVQINSTEILVSENLPYQKEPLNSPCLLMFYGSILVMLVLVVLFTVFAGYCYRNCDLGNWNTSEKSAEFRPHVPKKETLYAHLAFTEDPIL
SIO_010081: LOC109915963
subclass of: SO_0000673
so part of: LOC109915963
location: join(4951381..4951423,4951955..4952293,4952381..4952683,4956026..4956139,4956282..4956340,4956970..4957014)
location: region:4951381-4957014:1
so has part: feature:4951381-4951423:1:exon
so has part: feature:4951955-4952293:1:exon
so has part: feature:4952381-4952683:1:exon
so has part: feature:4956026-4956139:1:exon
so has part: feature:4956282-4956340:1:exon
so has part: feature:4956970-4957014:1:exon

XP_020371237.2
type: Protein
SIO_000068: ncbiprotein

position:4957014:1
position: 4957014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4951381-4951423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4951955-4952293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4952381-4952683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4956026-4956139:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4956282-4956340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4956970-4957014:1:exon

LOC109936177
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5000229..5008309
location: region:5000229-5008309:1
so has part: feature:5000229-5008309:1:exon
subclass of: SO_0000010

109936177
type: Gene
SIO_000068: ncbigene

position:5000229:1
position: 5000229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5008309:1
position: 5008309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5000229-5008309:1:exon

LOC109936177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936177
product: uncharacterized LOC109936177
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620329.1
SIO_010081: LOC109936177
subclass of: SO_0000673
so part of: LOC109936177
location: join(5000229..5000335,5000921..5001259,5001347..5001649,5003483..5003596,5003730..5003788,5007259..5008309)
location: region:5000229-5008309:1
so has part: feature:5000229-5000335:1:exon
so has part: feature:5000921-5001259:1:exon
so has part: feature:5001347-5001649:1:exon
so has part: feature:5003483-5003596:1:exon
so has part: feature:5003730-5003788:1:exon
so has part: feature:5007259-5008309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5000229-5000335:1:exon

position:5000335:1
position: 5000335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5000921-5001259:1:exon

position:5000921:1
position: 5000921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5001259:1
position: 5001259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5001347-5001649:1:exon

position:5001347:1
position: 5001347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5001649:1
position: 5001649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5003483-5003596:1:exon

position:5003483:1
position: 5003483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5003596:1
position: 5003596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5003730-5003788:1:exon

position:5003730:1
position: 5003730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5003788:1
position: 5003788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5007259-5008309:1:exon

position:5007259:1
position: 5007259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109936177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109936177
translation: MDLVTLCMLFYLLPVTVPQTTLPQSPALQSVSIGSTVRMKCHTDWYATGGVHWYKQKVRGNLHFVYTVSTYSTPAGRFSGEVNDKSTVYTLVVHNVQRNDSGVYFCAGRKLFLDPFIFGNGSQLLITGPPNVILLSPPRQEMFSMETLPLMCLVSNVISNNFPIDWNISTWDAEGWTDSVAMDSTGVYSIRSHIRVPAEAWKYGAVCTCSVQISSTAIRNSESISYQKESQHIDCSLMLYGSTLPMISLVMMLIVVGGCIYGNCGLGNRNTEKESTDFQTRDSNQETSYAPLKFKEDPIL
SIO_010081: LOC109936177
subclass of: SO_0000673
so part of: LOC109936177
location: join(5000293..5000335,5000921..5001259,5001347..5001649,5003483..5003596,5003730..5003788,5007259..5007303)
location: region:5000293-5007303:1
so has part: feature:5000293-5000335:1:exon
so has part: feature:5000921-5001259:1:exon
so has part: feature:5001347-5001649:1:exon
so has part: feature:5003483-5003596:1:exon
so has part: feature:5003730-5003788:1:exon
so has part: feature:5007259-5007303:1:exon

XP_048476286.1
type: Protein
SIO_000068: ncbiprotein

position:5000293:1
position: 5000293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5007303:1
position: 5007303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5000293-5000335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5000921-5001259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5001347-5001649:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5003483-5003596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5003730-5003788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5007259-5007303:1:exon

LOC109919210
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109919210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5240279..5251774
location: region:5240279-5251774:1
so has part: feature:5240279-5251774:1:exon
subclass of: SO_0000011

109919210
type: Gene
SIO_000068: ncbigene

position:5240279:1
position: 5240279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5251774:1
position: 5251774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5240279-5251774:1:exon

LOC109919210
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109919210
product: uncharacterized LOC109919210
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007266129.1
SIO_010081: LOC109919210
subclass of: SO_0000673
so part of: LOC109919210
location: join(5240279..5240389,5251463..5251576,5251716..5251774)
location: region:5240279-5251774:1
so has part: feature:5240279-5240389:1:exon
so has part: feature:5251463-5251576:1:exon
so has part: feature:5251716-5251774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5240279-5240389:1:exon

position:5240389:1
position: 5240389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5251463-5251576:1:exon

position:5251463:1
position: 5251463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5251576:1
position: 5251576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5251716-5251774:1:exon

position:5251716:1
position: 5251716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109919209
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109919209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <5275629..5285849
location: region:5275629-5285849:1
so has part: feature:5275629-5285849:1:exon
subclass of: SO_0000010

109919209
type: Gene
SIO_000068: ncbigene

position:5275629:1
position: 5275629
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:5285849:1
position: 5285849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5275629-5285849:1:exon

LOC109919209
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919209
product: uncharacterized LOC109919209
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620279.1
SIO_010081: LOC109919209
subclass of: SO_0000673
so part of: LOC109919209
location: join(<5275629..5275776,5275866..5276168,5279970..5280083,5280220..5280266,5285548..5285849)
location: region:5275629-5285849:1
so has part: feature:5275629-5275776:1:exon
so has part: feature:5275866-5276168:1:exon
so has part: feature:5279970-5280083:1:exon
so has part: feature:5280220-5280266:1:exon
so has part: feature:5285548-5285849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5275629-5275776:1:exon

position:5275776:1
position: 5275776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5275866-5276168:1:exon

position:5275866:1
position: 5275866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5276168:1
position: 5276168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5279970-5280083:1:exon

position:5279970:1
position: 5279970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5280083:1
position: 5280083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5280220-5280266:1:exon

position:5280220:1
position: 5280220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5280266:1
position: 5280266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5285548-5285849:1:exon

position:5285548:1
position: 5285548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109919209
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109919209
translation: SGEINNEASIYSLVIENAQRNDSGLYYCAARKSYGTPLVFGNGSKLLIAGPSNTLMLSPPRNDIFQMEVVPLICLVKNVKSKTLDIHWNTSTWNAVVWMVTWTMDATGAYSIMSHIRVPIEVWKHGVVHGCSAQNNSKEILTSESVSQKKEALHPVCLFKIYGSLLAIIFLLLVLTIITGWGFRNRHSAGNWKTDVRPRGQTQETVYAHLTFIEDPKF
SIO_010081: LOC109919209
subclass of: SO_0000673
so part of: LOC109919209
location: join(<5275629..5275776,5275866..5276168,5279970..5280083,5280220..5280266,5285548..5285592)
location: region:5275629-5285592:1
so has part: feature:5275629-5275776:1:exon
so has part: feature:5275866-5276168:1:exon
so has part: feature:5279970-5280083:1:exon
so has part: feature:5280220-5280266:1:exon
so has part: feature:5285548-5285592:1:exon

XP_048476236.1
type: Protein
SIO_000068: ncbiprotein

position:5285592:1
position: 5285592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5275629-5275776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5275866-5276168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5279970-5280083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5280220-5280266:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5285548-5285592:1:exon

LOC125487841
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5331966..5334985)
location: region:5331966-5334985:-1
so has part: feature:5331966-5334985:-1:exon
subclass of: SO_0000010

125487841
type: Gene
SIO_000068: ncbigene

position:5331966:-1
position: 5331966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5334985:-1
position: 5334985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5331966-5334985:-1:exon

LOC125487841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487841
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_048620280.1
SIO_010081: LOC125487841
subclass of: SO_0000673
so part of: LOC125487841
location: complement(join(5331966..5332870,5334916..5334985))
location: region:5331966-5334985:-1
so has part: feature:5334916-5334985:-1:exon
so has part: feature:5331966-5332870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5334916-5334985:-1:exon

position:5334916:-1
position: 5334916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5331966-5332870:-1:exon

position:5332870:-1
position: 5332870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MRYSVIYLIQDIYYPILAAVGVPTNMVTIAILSRGKCGLSKCITCYLVGMAVADLLVIISDPILSWIGAKYFPDSFLHITPVCSLTAVLASVATVVSVWLTVAFTFDRFVAICCEKLKRKYCTVKTAAVIVGTVNVLSCLESVPWYFTYQPLYIVDNIPWYCPYTSAFLFSSTWAAFEMFHYILTPCVPFLLILLLNVLTVRRIIVSSRVRQGLQGISKGENHKDPELQNRKKSIVLLFSISSSFILLWITRVVYNLYRRITIVRFYYSTNDPRLITDRVSVMLQALSSCTNTCIYVVTQSKFREELKNTVKYPLKSMFKLVKP
SIO_010081: LOC125487841
subclass of: SO_0000673
so part of: LOC125487841
location: complement(join(5331966..5332870,5334916..5334985))
location: region:5331966-5334985:-1
so has part: feature:5334916-5334985:-1:exon
so has part: feature:5331966-5332870:-1:exon

XP_048476237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5334916-5334985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5331966-5332870:-1:exon

LOC125487842
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5651306..5662421
location: region:5651306-5662421:1
so has part: feature:5651306-5662421:1:exon
subclass of: SO_0000010

125487842
type: Gene
SIO_000068: ncbigene

position:5651306:1
position: 5651306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5662421:1
position: 5662421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5651306-5662421:1:exon

LOC125487842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487842
product: T cell receptor alpha chain MC.7.G5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620281.1
SIO_010081: LOC125487842
subclass of: SO_0000673
so part of: LOC125487842
location: join(5651306..5651397,5655637..5655746,5656630..5656968,5657059..5657361,5659272..5659385,5659513..5659547,5662240..5662421)
location: region:5651306-5662421:1
so has part: feature:5651306-5651397:1:exon
so has part: feature:5655637-5655746:1:exon
so has part: feature:5656630-5656968:1:exon
so has part: feature:5657059-5657361:1:exon
so has part: feature:5659272-5659385:1:exon
so has part: feature:5659513-5659547:1:exon
so has part: feature:5662240-5662421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5651306-5651397:1:exon

position:5651397:1
position: 5651397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5655637-5655746:1:exon

position:5655637:1
position: 5655637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5655746:1
position: 5655746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5656630-5656968:1:exon

position:5656630:1
position: 5656630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5656968:1
position: 5656968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5657059-5657361:1:exon

position:5657059:1
position: 5657059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5657361:1
position: 5657361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5659272-5659385:1:exon

position:5659272:1
position: 5659272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5659385:1
position: 5659385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5659513-5659547:1:exon

position:5659513:1
position: 5659513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5659547:1
position: 5659547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5662240-5662421:1:exon

position:5662240:1
position: 5662240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha chain MC.7.G5-like
translation: MASNDPFDMDAGEMINKNQEPHHCCRRKKRRSSLQYKSMIHRIEDHSTKRGQTMNFFILCTLVYIFSVIVSEALFLQSPPVQNVSVRSTVKLHCHTGCLARAVVYWYKQQGQEHLQLLYIVTKYVPPNERFSGEFNNESTIYTLVIQNVQRNDSGLYYCAARPISRMPFVFGNGSKMLVTGRPDIFLLTPPLNGMFSMGTVTLVCLLNNFVADVLHIRWNISTWDTESWTDSETIISSEAYSIRSYIRVPANALSYGASCICSLQINSTAILNSKSVSFTKESSIIKCLSTFSVSFVVVIVLLLAFTFATAWTYRNRQSDNWKTDSLEKQETLYAHLAFTADQTF
SIO_010081: LOC125487842
subclass of: SO_0000673
so part of: LOC125487842
location: join(5651306..5651397,5655637..5655746,5656630..5656968,5657059..5657361,5659272..5659385,5659513..5659547,5662240..5662284)
location: region:5651306-5662284:1
so has part: feature:5651306-5651397:1:exon
so has part: feature:5655637-5655746:1:exon
so has part: feature:5656630-5656968:1:exon
so has part: feature:5657059-5657361:1:exon
so has part: feature:5659272-5659385:1:exon
so has part: feature:5659513-5659547:1:exon
so has part: feature:5662240-5662284:1:exon

XP_048476238.1
type: Protein
SIO_000068: ncbiprotein

position:5662284:1
position: 5662284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5651306-5651397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5655637-5655746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5656630-5656968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5657059-5657361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5659272-5659385:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5659513-5659547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5662240-5662284:1:exon

LOC125487843
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5753931..5761988)
location: region:5753931-5761988:-1
so has part: feature:5753931-5761988:-1:exon
subclass of: SO_0000010

125487843
type: Gene
SIO_000068: ncbigene

position:5753931:-1
position: 5753931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5761988:-1
position: 5761988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5753931-5761988:-1:exon

LOC125487843
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487843
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048620283.1
SIO_010081: LOC125487843
subclass of: SO_0000673
so part of: LOC125487843
location: complement(join(5753931..5754841,5761871..5761988))
location: region:5753931-5761988:-1
so has part: feature:5761871-5761988:-1:exon
so has part: feature:5753931-5754841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5761871-5761988:-1:exon

position:5761871:-1
position: 5761871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5753931-5754841:-1:exon

position:5754841:-1
position: 5754841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487843
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MVCGVPSCDGSVHVKDLTYLANVSMTELRSIVVDVVLKAVNIVAIGVLSRGTCGLTNCTTRYLMAMAMADLLVIITDVILYRISYFVFPASFLNITPVCSVLFVLARTTTDYSVWFTVTFTFDRFIAICCQKLKTKYCTAKAAVAILVTTSILLFLKNIPNYFVLEAGDIVDNISWGCYFNPNCYTDPGWIVFDWFDAVLNPLLPIVLMMLLNTLTVRHILMTSRIRKGLIGRKAGDIYSDSEMESRRKSVILLFAISASFILLWLVSVIHFFYDKLTRISTDTYKNLEYIIQRIGFMLQNLSCCTNTFIYGVTQSKFREQVKRVVKYPFISMFRSLHNKIN
SIO_010081: LOC125487843
subclass of: SO_0000673
so part of: LOC125487843
location: complement(join(5753931..5754841,5761871..5761988))
location: region:5753931-5761988:-1
so has part: feature:5761871-5761988:-1:exon
so has part: feature:5753931-5754841:-1:exon

XP_048476240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5761871-5761988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5753931-5754841:-1:exon

LOC109923055
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5887164..5922543
location: region:5887164-5922543:1
so has part: feature:5887164-5922543:1:exon
subclass of: SO_0000010

109923055
type: Gene
SIO_000068: ncbigene

position:5887164:1
position: 5887164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5922543:1
position: 5922543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5887164-5922543:1:exon

LOC109923055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923055
product: toll-like receptor 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 110 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620331.1
SIO_010081: LOC109923055
subclass of: SO_0000673
so part of: LOC109923055
location: join(5887164..5887305,5888119..5888165,5888393..5888667,5919483..5922543)
location: region:5887164-5922543:1
so has part: feature:5887164-5887305:1:exon
so has part: feature:5888119-5888165:1:exon
so has part: feature:5888393-5888667:1:exon
so has part: feature:5919483-5922543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5887164-5887305:1:exon

position:5887305:1
position: 5887305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5888119-5888165:1:exon

position:5888119:1
position: 5888119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5888165:1
position: 5888165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5888393-5888667:1:exon

position:5888393:1
position: 5888393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5888667:1
position: 5888667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5919483-5922543:1:exon

position:5919483:1
position: 5919483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109923055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923055
product: toll-like receptor 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 110 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048620330.1
SIO_010081: LOC109923055
subclass of: SO_0000673
so part of: LOC109923055
location: join(5887164..5887305,5888393..5888667,5919483..5922543)
location: region:5887164-5922543:1
so has part: feature:5887164-5887305:1:exon
so has part: feature:5888393-5888667:1:exon
so has part: feature:5919483-5922543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5887164-5887305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5888393-5888667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5919483-5922543:1:exon

LOC109923055
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109923055
product: toll-like receptor 13, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007266130.1
SIO_010081: LOC109923055
so part of: LOC109923055
location: join(5887164..5887305,5888393..5888667,5889345..5889449)
location: region:5887164-5889449:1
so has part: feature:5887164-5887305:1:exon
so has part: feature:5888393-5888667:1:exon
so has part: feature:5889345-5889449:1:exon

position:5889449:1
position: 5889449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5887164-5887305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5888393-5888667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5889345-5889449:1:exon

position:5889345:1
position: 5889345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109923055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923055
product: toll-like receptor 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 110 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048620332.1
SIO_010081: LOC109923055
subclass of: SO_0000673
so part of: LOC109923055
location: join(5887490..5887517,5888393..5888667,5919483..5922543)
location: region:5887490-5922543:1
so has part: feature:5887490-5887517:1:exon
so has part: feature:5888393-5888667:1:exon
so has part: feature:5919483-5922543:1:exon

position:5887490:1
position: 5887490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5887490-5887517:1:exon

position:5887517:1
position: 5887517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5888393-5888667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5919483-5922543:1:exon

trnai-aau
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnai-aau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5887693..5887766
location: region:5887693-5887766:1
so has part: feature:5887693-5887766:1:exon
subclass of: SO_0000663

109933814
type: Gene
SIO_000068: ncbigene

position:5887693:1
position: 5887693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5887766:1
position: 5887766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5887693-5887766:1:exon

trnai-aau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnai-aau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5887727..5887729,aa:Ile,seq:aat)
SIO_010081: trnai-aau
subclass of: SO_0000673
so part of: trnai-aau
location: 5887693..5887766
location: region:5887693-5887766:1
so has part: feature:5887693-5887766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5887693-5887766:1:exon

trnai-aau
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnai-aau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5889754..5889827
location: region:5889754-5889827:1
so has part: feature:5889754-5889827:1:exon
subclass of: SO_0000663

109933816
type: Gene
SIO_000068: ncbigene

position:5889754:1
position: 5889754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5889827:1
position: 5889827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5889754-5889827:1:exon

trnai-aau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnai-aau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5889788..5889790,aa:Ile,seq:aat)
SIO_010081: trnai-aau
subclass of: SO_0000673
so part of: trnai-aau
location: 5889754..5889827
location: region:5889754-5889827:1
so has part: feature:5889754-5889827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5889754-5889827:1:exon

trnar-ucu
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnar-ucu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5890527..5890618)
location: region:5890527-5890618:-1
so has part: feature:5890527-5890618:-1:exon
subclass of: SO_0000663

109933818
type: Gene
SIO_000068: ncbigene

position:5890527:-1
position: 5890527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5890618:-1
position: 5890618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5890527-5890618:-1:exon

trnar-ucu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnar-ucu
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5890583..5890585),aa:Arg, seq:tct)
SIO_010081: trnar-ucu
subclass of: SO_0000673
so part of: trnar-ucu
location: complement(join(5890527..5890562,5890582..5890618))
location: region:5890527-5890618:-1
so has part: feature:5890582-5890618:-1:exon
so has part: feature:5890527-5890562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5890582-5890618:-1:exon

position:5890582:-1
position: 5890582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5890527-5890562:-1:exon

position:5890562:-1
position: 5890562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trnai-aau
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnai-aau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5892830..5892903
location: region:5892830-5892903:1
so has part: feature:5892830-5892903:1:exon
subclass of: SO_0000663

109933817
type: Gene
SIO_000068: ncbigene

position:5892830:1
position: 5892830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5892903:1
position: 5892903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5892830-5892903:1:exon

trnai-aau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnai-aau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5892864..5892866,aa:Ile,seq:aat)
SIO_010081: trnai-aau
subclass of: SO_0000673
so part of: trnai-aau
location: 5892830..5892903
location: region:5892830-5892903:1
so has part: feature:5892830-5892903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5892830-5892903:1:exon

trnas-cga
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnas-cga
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5893089..5893170)
location: region:5893089-5893170:-1
so has part: feature:5893089-5893170:-1:exon
subclass of: SO_0000663

109933819
type: Gene
SIO_000068: ncbigene

position:5893089:-1
position: 5893089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5893170:-1
position: 5893170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5893089-5893170:-1:exon

trnas-cga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnas-cga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5893135..5893137),aa:Ser, seq:cga)
SIO_010081: trnas-cga
subclass of: SO_0000673
so part of: trnas-cga
location: complement(5893089..5893170)
location: region:5893089-5893170:-1
so has part: feature:5893089-5893170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5893089-5893170:-1:exon

trnai-aau
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnai-aau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5893440..5893513)
location: region:5893440-5893513:-1
so has part: feature:5893440-5893513:-1:exon
subclass of: SO_0000663

109933815
type: Gene
SIO_000068: ncbigene

position:5893440:-1
position: 5893440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5893513:-1
position: 5893513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5893440-5893513:-1:exon

trnai-aau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnai-aau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5893477..5893479),aa:Ile, seq:aat)
SIO_010081: trnai-aau
subclass of: SO_0000673
so part of: trnai-aau
location: complement(5893440..5893513)
location: region:5893440-5893513:-1
so has part: feature:5893440-5893513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5893440-5893513:-1:exon

LOC109923055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923055
product: toll-like receptor 13, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 110 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048620333.1
SIO_010081: LOC109923055
subclass of: SO_0000673
so part of: LOC109923055
location: join(5897805..5897891,5919483..5922543)
location: region:5897805-5922543:1
so has part: feature:5897805-5897891:1:exon
so has part: feature:5919483-5922543:1:exon

position:5897805:1
position: 5897805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5897805-5897891:1:exon

position:5897891:1
position: 5897891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5919483-5922543:1:exon

LOC109923055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 13
translation: MAQLSVDWPQLFCALSCIALAPLVPGYSFRNCIQNANHNGSFQCVHRFLTQVSSAVFDLPPHTIHLNISHNLLTRLPVGSFSGIPSLLSLRLDYNQIKHVKGGAFSNLSQLLVLNLSYNKIPQLTPSDFLGLENLCQLLVDHNRLATVQPDAFTTPRSLQTLDMSFNELRNFSGVVSSIAALRKLTFLDLSTNHLESLQHSAPLPPSLQFLYLCNNLLKALDCQRDFLNRNFTLDLSDNKISQFSKVDLRKVAWLILKNNPLDISEFLRFRNVDPQRVEYSGLRLHSQFANLCQHLGNGTMERLLLQNNQISLHNLKSMSKCPAIKAWDLSHNYLIRDDCLDFVPRKEQVRSFILEHNRIQMLSSCSKGGNGVIQFPKLTYLSYRYNRILAIASHAFSHTAYVQTLLLNINNIAVINKTAFANLSELLTLRLDNNLITDIYQETFRELTSLRTLNLRNNRVSIIFRNVFVNLSSLDILDLGGNKIRSLTNLSFSGLHNLTKLYLDRNCITHISREIFGDLVSLKVLDLAKNWIRYNSGLTEKSPFINLTKLNILKLQAQQPYGINIIPPKFFKGLISLQALYLGENKMSLSKYEFEDLINLKTLSMPDTCNGIHSLNPGVFQKLQHLQRLNLENVGLQFMSVDIFGSLSNLRTLVLGKNAIQTVNSTVLEHLSSLSYLDLRKNPFPCICSNSWFQNWCLSNPRVQVVYFYNQTCANQQTEYLYRFDARVCYLDIGHLMFEIILPFLLLFTFAPIIYGKGYWHIKYGLYIFRSWLNDYRGREESQQCYRYDAFISYNSNDERWVLQELVPNLETEGSQCFKLCLHHRDFELGKYIIDNIVDSIYQSRKTICVMSRNYLESEWCSMELELASYRLFHELKDVVILIFLEKIPEAELSTYHKMRKVTKKKTYIQWPTDVEAQKLFWIKVREAIKGSSRAKDRGSVVDS
SIO_010081: LOC109923055
subclass of: SO_0000673
so part of: LOC109923055
location: 5919563..5922400
location: region:5919563-5922400:1
so has part: feature:5919563-5922400:1:exon

XP_048476287.1
type: Protein
SIO_000068: ncbiprotein

position:5919563:1
position: 5919563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5922400:1
position: 5922400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5919563-5922400:1:exon

LOC109923055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 13
translation: MAQLSVDWPQLFCALSCIALAPLVPGYSFRNCIQNANHNGSFQCVHRFLTQVSSAVFDLPPHTIHLNISHNLLTRLPVGSFSGIPSLLSLRLDYNQIKHVKGGAFSNLSQLLVLNLSYNKIPQLTPSDFLGLENLCQLLVDHNRLATVQPDAFTTPRSLQTLDMSFNELRNFSGVVSSIAALRKLTFLDLSTNHLESLQHSAPLPPSLQFLYLCNNLLKALDCQRDFLNRNFTLDLSDNKISQFSKVDLRKVAWLILKNNPLDISEFLRFRNVDPQRVEYSGLRLHSQFANLCQHLGNGTMERLLLQNNQISLHNLKSMSKCPAIKAWDLSHNYLIRDDCLDFVPRKEQVRSFILEHNRIQMLSSCSKGGNGVIQFPKLTYLSYRYNRILAIASHAFSHTAYVQTLLLNINNIAVINKTAFANLSELLTLRLDNNLITDIYQETFRELTSLRTLNLRNNRVSIIFRNVFVNLSSLDILDLGGNKIRSLTNLSFSGLHNLTKLYLDRNCITHISREIFGDLVSLKVLDLAKNWIRYNSGLTEKSPFINLTKLNILKLQAQQPYGINIIPPKFFKGLISLQALYLGENKMSLSKYEFEDLINLKTLSMPDTCNGIHSLNPGVFQKLQHLQRLNLENVGLQFMSVDIFGSLSNLRTLVLGKNAIQTVNSTVLEHLSSLSYLDLRKNPFPCICSNSWFQNWCLSNPRVQVVYFYNQTCANQQTEYLYRFDARVCYLDIGHLMFEIILPFLLLFTFAPIIYGKGYWHIKYGLYIFRSWLNDYRGREESQQCYRYDAFISYNSNDERWVLQELVPNLETEGSQCFKLCLHHRDFELGKYIIDNIVDSIYQSRKTICVMSRNYLESEWCSMELELASYRLFHELKDVVILIFLEKIPEAELSTYHKMRKVTKKKTYIQWPTDVEAQKLFWIKVREAIKGSSRAKDRGSVVDS
SIO_010081: LOC109923055
subclass of: SO_0000673
so part of: LOC109923055
location: 5919563..5922400
location: region:5919563-5922400:1
so has part: feature:5919563-5922400:1:exon

XP_048476288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5919563-5922400:1:exon

LOC109923055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 13
translation: MAQLSVDWPQLFCALSCIALAPLVPGYSFRNCIQNANHNGSFQCVHRFLTQVSSAVFDLPPHTIHLNISHNLLTRLPVGSFSGIPSLLSLRLDYNQIKHVKGGAFSNLSQLLVLNLSYNKIPQLTPSDFLGLENLCQLLVDHNRLATVQPDAFTTPRSLQTLDMSFNELRNFSGVVSSIAALRKLTFLDLSTNHLESLQHSAPLPPSLQFLYLCNNLLKALDCQRDFLNRNFTLDLSDNKISQFSKVDLRKVAWLILKNNPLDISEFLRFRNVDPQRVEYSGLRLHSQFANLCQHLGNGTMERLLLQNNQISLHNLKSMSKCPAIKAWDLSHNYLIRDDCLDFVPRKEQVRSFILEHNRIQMLSSCSKGGNGVIQFPKLTYLSYRYNRILAIASHAFSHTAYVQTLLLNINNIAVINKTAFANLSELLTLRLDNNLITDIYQETFRELTSLRTLNLRNNRVSIIFRNVFVNLSSLDILDLGGNKIRSLTNLSFSGLHNLTKLYLDRNCITHISREIFGDLVSLKVLDLAKNWIRYNSGLTEKSPFINLTKLNILKLQAQQPYGINIIPPKFFKGLISLQALYLGENKMSLSKYEFEDLINLKTLSMPDTCNGIHSLNPGVFQKLQHLQRLNLENVGLQFMSVDIFGSLSNLRTLVLGKNAIQTVNSTVLEHLSSLSYLDLRKNPFPCICSNSWFQNWCLSNPRVQVVYFYNQTCANQQTEYLYRFDARVCYLDIGHLMFEIILPFLLLFTFAPIIYGKGYWHIKYGLYIFRSWLNDYRGREESQQCYRYDAFISYNSNDERWVLQELVPNLETEGSQCFKLCLHHRDFELGKYIIDNIVDSIYQSRKTICVMSRNYLESEWCSMELELASYRLFHELKDVVILIFLEKIPEAELSTYHKMRKVTKKKTYIQWPTDVEAQKLFWIKVREAIKGSSRAKDRGSVVDS
SIO_010081: LOC109923055
subclass of: SO_0000673
so part of: LOC109923055
location: 5919563..5922400
location: region:5919563-5922400:1
so has part: feature:5919563-5922400:1:exon

XP_048476289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5919563-5922400:1:exon

LOC109923055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 13
translation: MAQLSVDWPQLFCALSCIALAPLVPGYSFRNCIQNANHNGSFQCVHRFLTQVSSAVFDLPPHTIHLNISHNLLTRLPVGSFSGIPSLLSLRLDYNQIKHVKGGAFSNLSQLLVLNLSYNKIPQLTPSDFLGLENLCQLLVDHNRLATVQPDAFTTPRSLQTLDMSFNELRNFSGVVSSIAALRKLTFLDLSTNHLESLQHSAPLPPSLQFLYLCNNLLKALDCQRDFLNRNFTLDLSDNKISQFSKVDLRKVAWLILKNNPLDISEFLRFRNVDPQRVEYSGLRLHSQFANLCQHLGNGTMERLLLQNNQISLHNLKSMSKCPAIKAWDLSHNYLIRDDCLDFVPRKEQVRSFILEHNRIQMLSSCSKGGNGVIQFPKLTYLSYRYNRILAIASHAFSHTAYVQTLLLNINNIAVINKTAFANLSELLTLRLDNNLITDIYQETFRELTSLRTLNLRNNRVSIIFRNVFVNLSSLDILDLGGNKIRSLTNLSFSGLHNLTKLYLDRNCITHISREIFGDLVSLKVLDLAKNWIRYNSGLTEKSPFINLTKLNILKLQAQQPYGINIIPPKFFKGLISLQALYLGENKMSLSKYEFEDLINLKTLSMPDTCNGIHSLNPGVFQKLQHLQRLNLENVGLQFMSVDIFGSLSNLRTLVLGKNAIQTVNSTVLEHLSSLSYLDLRKNPFPCICSNSWFQNWCLSNPRVQVVYFYNQTCANQQTEYLYRFDARVCYLDIGHLMFEIILPFLLLFTFAPIIYGKGYWHIKYGLYIFRSWLNDYRGREESQQCYRYDAFISYNSNDERWVLQELVPNLETEGSQCFKLCLHHRDFELGKYIIDNIVDSIYQSRKTICVMSRNYLESEWCSMELELASYRLFHELKDVVILIFLEKIPEAELSTYHKMRKVTKKKTYIQWPTDVEAQKLFWIKVREAIKGSSRAKDRGSVVDS
SIO_010081: LOC109923055
subclass of: SO_0000673
so part of: LOC109923055
location: 5919563..5922400
location: region:5919563-5922400:1
so has part: feature:5919563-5922400:1:exon

XP_048476290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5919563-5922400:1:exon

LOC109923056
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5955847..5960393
location: region:5955847-5960393:1
so has part: feature:5955847-5960393:1:exon
subclass of: SO_0000010

109923056
type: Gene
SIO_000068: ncbigene

position:5955847:1
position: 5955847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5960393:1
position: 5960393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5955847-5960393:1:exon

LOC109923056
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923056
product: thioredoxin-interacting protein-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020523100.2
SIO_010081: LOC109923056
subclass of: SO_0000673
so part of: LOC109923056
location: join(5955847..5956206,5957061..5957133,5957248..5957395,5957845..5957947,5958049..5958302,5958586..5958760,5958884..5959029,5959128..5960393)
location: region:5955847-5960393:1
so has part: feature:5955847-5956206:1:exon
so has part: feature:5957061-5957133:1:exon
so has part: feature:5957248-5957395:1:exon
so has part: feature:5957845-5957947:1:exon
so has part: feature:5958049-5958302:1:exon
so has part: feature:5958586-5958760:1:exon
so has part: feature:5958884-5959029:1:exon
so has part: feature:5959128-5960393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5955847-5956206:1:exon

position:5956206:1
position: 5956206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5957061-5957133:1:exon

position:5957061:1
position: 5957061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5957133:1
position: 5957133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5957248-5957395:1:exon

position:5957248:1
position: 5957248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5957395:1
position: 5957395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5957845-5957947:1:exon

position:5957845:1
position: 5957845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5957947:1
position: 5957947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5958049-5958302:1:exon

position:5958049:1
position: 5958049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5958302:1
position: 5958302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5958586-5958760:1:exon

position:5958586:1
position: 5958586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5958760:1
position: 5958760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5958884-5959029:1:exon

position:5958884:1
position: 5958884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5959029:1
position: 5959029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5959128-5960393:1:exon

position:5959128:1
position: 5959128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109923056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-interacting protein-like
translation: MVVNKKLLPTFELVFSSERTYTAGDKVAGRVRLQTAQLLRVTAVRIVALGYARAQLLKGSQPLRQQQDYLHFQEALLPDGENRATDVDGSMFLQPGKMYEYSFSFQIPEGPLPPSFKGKYGGVCYLVTAYVDREKQPSLETSRNFDVVEPIDVNTPTLLCPVGGSNKKKVTCFFLSDGYVCIAAKIDRKGYCQGDQICINAQFQNNCSRIVMPKAAIMAKQTYQVSGNTKVFKEKLNSVRGNHIISGMSESWCDKCLQIPTVKPSINSHIICLEYSLLVYVHIPGSKKLVLELPLVIGTIPYNGMNSRSFSNASNCSSVSSSSMSWPHMEFPEQMAATPFHVTSESHRLESPTTPLLEEYDGLPESPIFMKSAVFSYGSSPVSSDVDENGNCECMVE
SIO_010081: LOC109923056
subclass of: SO_0000673
so part of: LOC109923056
location: join(5955951..5956206,5957061..5957133,5957248..5957395,5957845..5957947,5958049..5958302,5958586..5958760,5958884..5959029,5959128..5959166)
location: region:5955951-5959166:1
so has part: feature:5955951-5956206:1:exon
so has part: feature:5957061-5957133:1:exon
so has part: feature:5957248-5957395:1:exon
so has part: feature:5957845-5957947:1:exon
so has part: feature:5958049-5958302:1:exon
so has part: feature:5958586-5958760:1:exon
so has part: feature:5958884-5959029:1:exon
so has part: feature:5959128-5959166:1:exon

XP_020378689.1
type: Protein
SIO_000068: ncbiprotein

position:5955951:1
position: 5955951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5959166:1
position: 5959166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5955951-5956206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5957061-5957133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5957248-5957395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5957845-5957947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5958049-5958302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5958586-5958760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5958884-5959029:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5959128-5959166:1:exon

polr3glb
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: polr3glb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5984961..5998918
location: region:5984961-5998918:1
so has part: feature:5984961-5998918:1:exon
subclass of: SO_0000010

109926068
type: Gene
SIO_000068: ncbigene

position:5984961:1
position: 5984961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5998918:1
position: 5998918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5984961-5998918:1:exon

polr3glb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: polr3glb
product: RNA polymerase III subunit GL b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048620334.1
SIO_010081: polr3glb
subclass of: SO_0000673
so part of: polr3glb
location: join(5984961..5985562,5987421..5987550,5989184..5989252,5992301..5992357,5993270..5993343,5994522..5994632,5997624..5998918)
location: region:5984961-5998918:1
so has part: feature:5984961-5985562:1:exon
so has part: feature:5987421-5987550:1:exon
so has part: feature:5989184-5989252:1:exon
so has part: feature:5992301-5992357:1:exon
so has part: feature:5993270-5993343:1:exon
so has part: feature:5994522-5994632:1:exon
so has part: feature:5997624-5998918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5984961-5985562:1:exon

position:5985562:1
position: 5985562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5987421-5987550:1:exon

position:5987421:1
position: 5987421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5987550:1
position: 5987550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5989184-5989252:1:exon

position:5989184:1
position: 5989184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5989252:1
position: 5989252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5992301-5992357:1:exon

position:5992301:1
position: 5992301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5992357:1
position: 5992357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5993270-5993343:1:exon

position:5993270:1
position: 5993270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5993343:1
position: 5993343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5994522-5994632:1:exon

position:5994522:1
position: 5994522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5994632:1
position: 5994632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5997624-5998918:1:exon

position:5997624:1
position: 5997624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

polr3glb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: polr3glb
product: RNA polymerase III subunit GL b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048620335.1
SIO_010081: polr3glb
subclass of: SO_0000673
so part of: polr3glb
location: join(5984964..5985419,5985941..5986035,5987421..5987550,5989184..5989252,5992301..5992357,5993270..5993343,5994522..5994632,5997624..5998918)
location: region:5984964-5998918:1
so has part: feature:5984964-5985419:1:exon
so has part: feature:5985941-5986035:1:exon
so has part: feature:5987421-5987550:1:exon
so has part: feature:5989184-5989252:1:exon
so has part: feature:5992301-5992357:1:exon
so has part: feature:5993270-5993343:1:exon
so has part: feature:5994522-5994632:1:exon
so has part: feature:5997624-5998918:1:exon

position:5984964:1
position: 5984964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5984964-5985419:1:exon

position:5985419:1
position: 5985419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5985941-5986035:1:exon

position:5985941:1
position: 5985941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5986035:1
position: 5986035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5987421-5987550:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5989184-5989252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5992301-5992357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5993270-5993343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5994522-5994632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5997624-5998918:1:exon

polr3glb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: polr3glb
product: RNA polymerase III subunit GL b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048620336.1
SIO_010081: polr3glb
subclass of: SO_0000673
so part of: polr3glb
location: join(5984964..5985419,5987421..5987550,5989184..5989252,5992301..5992357,5993270..5993343,5994522..5994632,5997624..5998918)
location: region:5984964-5998918:1
so has part: feature:5984964-5985419:1:exon
so has part: feature:5987421-5987550:1:exon
so has part: feature:5989184-5989252:1:exon
so has part: feature:5992301-5992357:1:exon
so has part: feature:5993270-5993343:1:exon
so has part: feature:5994522-5994632:1:exon
so has part: feature:5997624-5998918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5984964-5985419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5987421-5987550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5989184-5989252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5992301-5992357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5993270-5993343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5994522-5994632:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5997624-5998918:1:exon

polr3glb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: polr3glb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase III subunit GL b isoform X1
translation: MGYNEKATKKLPKKSIKSLELKAVPLQTGEEAEYMLALKQELRGAMRSLPYYVKPAAPKKDIERYSDKYQSSGPTDNTIEWNPDWRRLPRELRIRIRKPLKDKTPIAGRKIKPRTSVEKEEIIKKLENLEKKEEAHSSDEEDEQEKEEEEKENEEEYDEEEFEEETDYVMSYFDNGEEFGGDSDDNMDEAIY
SIO_010081: polr3glb
subclass of: SO_0000673
so part of: polr3glb
location: join(5985512..5985562,5987421..5987550,5989184..5989252,5992301..5992357,5993270..5993343,5994522..5994632,5997624..5997710)
location: region:5985512-5997710:1
so has part: feature:5985512-5985562:1:exon
so has part: feature:5987421-5987550:1:exon
so has part: feature:5989184-5989252:1:exon
so has part: feature:5992301-5992357:1:exon
so has part: feature:5993270-5993343:1:exon
so has part: feature:5994522-5994632:1:exon
so has part: feature:5997624-5997710:1:exon

XP_048476291.1
type: Protein
SIO_000068: ncbiprotein

position:5985512:1
position: 5985512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5997710:1
position: 5997710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5985512-5985562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5987421-5987550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5989184-5989252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5992301-5992357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5993270-5993343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5994522-5994632:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5997624-5997710:1:exon

polr3glb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: polr3glb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase III subunit GL b isoform X2
translation: MLALKQELRGAMRSLPYYVKPAAPKKDIERYSDKYQSSGPTDNTIEWNPDWRRLPRELRIRIRKPLKDKTPIAGRKIKPRTSVEKEEIIKKLENLEKKEEAHSSDEEDEQEKEEEEKENEEEYDEEEFEEETDYVMSYFDNGEEFGGDSDDNMDEAIY
SIO_010081: polr3glb
subclass of: SO_0000673
so part of: polr3glb
location: join(5987472..5987550,5989184..5989252,5992301..5992357,5993270..5993343,5994522..5994632,5997624..5997710)
location: region:5987472-5997710:1
so has part: feature:5987472-5987550:1:exon
so has part: feature:5989184-5989252:1:exon
so has part: feature:5992301-5992357:1:exon
so has part: feature:5993270-5993343:1:exon
so has part: feature:5994522-5994632:1:exon
so has part: feature:5997624-5997710:1:exon

XP_048476292.1
type: Protein
SIO_000068: ncbiprotein

position:5987472:1
position: 5987472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5987472-5987550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5989184-5989252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5992301-5992357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5993270-5993343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5994522-5994632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5997624-5997710:1:exon

polr3glb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: polr3glb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase III subunit GL b isoform X2
translation: MLALKQELRGAMRSLPYYVKPAAPKKDIERYSDKYQSSGPTDNTIEWNPDWRRLPRELRIRIRKPLKDKTPIAGRKIKPRTSVEKEEIIKKLENLEKKEEAHSSDEEDEQEKEEEEKENEEEYDEEEFEEETDYVMSYFDNGEEFGGDSDDNMDEAIY
SIO_010081: polr3glb
subclass of: SO_0000673
so part of: polr3glb
location: join(5987472..5987550,5989184..5989252,5992301..5992357,5993270..5993343,5994522..5994632,5997624..5997710)
location: region:5987472-5997710:1
so has part: feature:5987472-5987550:1:exon
so has part: feature:5989184-5989252:1:exon
so has part: feature:5992301-5992357:1:exon
so has part: feature:5993270-5993343:1:exon
so has part: feature:5994522-5994632:1:exon
so has part: feature:5997624-5997710:1:exon

XP_048476293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5987472-5987550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5989184-5989252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5992301-5992357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5993270-5993343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5994522-5994632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5997624-5997710:1:exon

rbm8a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: rbm8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6003365..6016400)
location: region:6003365-6016400:-1
so has part: feature:6003365-6016400:-1:exon
subclass of: SO_0000010

125487844
type: Gene
SIO_000068: ncbigene

position:6003365:-1
position: 6003365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6016400:-1
position: 6016400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6003365-6016400:-1:exon

rbm8a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rbm8a
product: RNA binding motif protein 8A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620284.1
SIO_010081: rbm8a
subclass of: SO_0000673
so part of: rbm8a
location: complement(join(6003365..6003618,6004325..6004461,6004653..6004789,6005566..6005643,6007830..6007889,6016283..6016400))
location: region:6003365-6016400:-1
so has part: feature:6016283-6016400:-1:exon
so has part: feature:6007830-6007889:-1:exon
so has part: feature:6005566-6005643:-1:exon
so has part: feature:6004653-6004789:-1:exon
so has part: feature:6004325-6004461:-1:exon
so has part: feature:6003365-6003618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6016283-6016400:-1:exon

position:6016283:-1
position: 6016283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6007830-6007889:-1:exon

position:6007830:-1
position: 6007830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6007889:-1
position: 6007889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6005566-6005643:-1:exon

position:6005566:-1
position: 6005566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6005643:-1
position: 6005643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6004653-6004789:-1:exon

position:6004653:-1
position: 6004653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6004789:-1
position: 6004789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6004325-6004461:-1:exon

position:6004325:-1
position: 6004325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6004461:-1
position: 6004461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6003365-6003618:-1:exon

position:6003618:-1
position: 6003618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rbm8a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rbm8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 8A
translation: MGDAANGGVGGGVHKVFCISVRGEVGQIEGCQAKQLGFRKSIHKLKEKAKKRKGRGFGSEEGARSRLREDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGSELAGQPISVDWGFVRGPPKSKRRSGRRRSRSPDRKRH
SIO_010081: rbm8a
subclass of: SO_0000673
so part of: rbm8a
location: complement(join(6003573..6003618,6004325..6004461,6004653..6004789,6005566..6005643,6007830..6007889,6016283..6016400))
location: region:6003573-6016400:-1
so has part: feature:6016283-6016400:-1:exon
so has part: feature:6007830-6007889:-1:exon
so has part: feature:6005566-6005643:-1:exon
so has part: feature:6004653-6004789:-1:exon
so has part: feature:6004325-6004461:-1:exon
so has part: feature:6003573-6003618:-1:exon

XP_048476241.1
type: Protein
SIO_000068: ncbiprotein

position:6003573:-1
position: 6003573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6016283-6016400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6007830-6007889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6005566-6005643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6004653-6004789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6004325-6004461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6003573-6003618:-1:exon

LOC109925500
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6017084..6018344)
location: region:6017084-6018344:-1
so has part: feature:6017084-6018344:-1:exon
subclass of: SO_0000010

109925500
type: Gene
SIO_000068: ncbigene

position:6017084:-1
position: 6017084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6018344:-1
position: 6018344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6017084-6018344:-1:exon

LOC109925500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925500
product: actin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 842 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620337.1
SIO_010081: LOC109925500
subclass of: SO_0000673
so part of: LOC109925500
location: complement(6017084..6018344)
location: region:6017084-6018344:-1
so has part: feature:6017084-6018344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6017084-6018344:-1:exon

LOC109925500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-3-like
translation: MSKSSPVAPQGPTMCQEAFTETAAVVMDNGTGYTKAGFAGDDKPRVVVRSLVGIPSQSCDDPSKVPDYYIGNAIPGDPWVLRTPVVTNGIVTDWDALEMLWHHILYQELRVAPEEHAVLLADAPLSPTTNREKTAELLFEGFAVPAMYVAHQSLLSLYSTGRTTGLIIESGLGVSYTAPIHNGYTMPHATFRLDLAGGGLTEYMAKLLEECGNPFSAEETHIVRNIKETCCYVAQDFDEEMVANENDYLTDYELPDGHIITIGNERFRCPESLFKPDAVGLTDPGLHALAWKSLEKCKPEQQAELLNNIVLSGGSSMFSGFAERVQREMGELAPHRAKLNVYASPQRKFSVWIGGSITACLNTFQSMWVSRRDYDEKGPVIVHRKCF
SIO_010081: LOC109925500
subclass of: SO_0000673
so part of: LOC109925500
location: complement(6017160..6018323)
location: region:6017160-6018323:-1
so has part: feature:6017160-6018323:-1:exon

XP_048476294.1
type: Protein
SIO_000068: ncbiprotein

position:6017160:-1
position: 6017160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6018323:-1
position: 6018323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6017160-6018323:-1:exon

trnai-aau
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnai-aau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(6023623..6023696)
location: region:6023623-6023696:-1
so has part: feature:6023623-6023696:-1:exon
subclass of: SO_0000663

125487897
type: Gene
SIO_000068: ncbigene

position:6023623:-1
position: 6023623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6023696:-1
position: 6023696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6023623-6023696:-1:exon

trnai-aau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnai-aau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(6023660..6023662),aa:Ile, seq:aat)
SIO_010081: trnai-aau
subclass of: SO_0000673
so part of: trnai-aau
location: complement(6023623..6023696)
location: region:6023623-6023696:-1
so has part: feature:6023623-6023696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6023623-6023696:-1:exon

LOC109925501
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6034421..6045679)
location: region:6034421-6045679:-1
so has part: feature:6034421-6045679:-1:exon
subclass of: SO_0000010

109925501
type: Gene
SIO_000068: ncbigene

position:6034421:-1
position: 6034421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6045679:-1
position: 6045679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6034421-6045679:-1:exon

LOC109925501
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925501
product: cellular retinoic acid-binding protein 2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020525438.2
SIO_010081: LOC109925501
subclass of: SO_0000673
so part of: LOC109925501
location: complement(join(6034421..6035543,6038387..6038503,6039742..6039920,6045434..6045679))
location: region:6034421-6045679:-1
so has part: feature:6045434-6045679:-1:exon
so has part: feature:6039742-6039920:-1:exon
so has part: feature:6038387-6038503:-1:exon
so has part: feature:6034421-6035543:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6045434-6045679:-1:exon

position:6045434:-1
position: 6045434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6039742-6039920:-1:exon

position:6039742:-1
position: 6039742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6039920:-1
position: 6039920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6038387-6038503:-1:exon

position:6038387:-1
position: 6038387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6038503:-1
position: 6038503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6034421-6035543:-1:exon

position:6035543:-1
position: 6035543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109925501
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular retinoic acid-binding protein 2-like
translation: MSRNFTGTWKIKSSENFEELLKQLDVSLLLRKIAVTAASNPSVEIKQDGENFYIRTATPVRTTEIRFRVGEEFDEQTVDGRPCKSLARWIGENKMECEQKLLKGEGPKTSWTRELTSNDELILTMTANNVVCTRLYVRN
SIO_010081: LOC109925501
subclass of: SO_0000673
so part of: LOC109925501
location: complement(join(6035493..6035543,6038387..6038503,6039742..6039920,6045434..6045506))
location: region:6035493-6045506:-1
so has part: feature:6045434-6045506:-1:exon
so has part: feature:6039742-6039920:-1:exon
so has part: feature:6038387-6038503:-1:exon
so has part: feature:6035493-6035543:-1:exon

XP_020381027.2
type: Protein
SIO_000068: ncbiprotein

position:6035493:-1
position: 6035493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6045506:-1
position: 6045506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6045434-6045506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6039742-6039920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6038387-6038503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6035493-6035543:-1:exon

lrrc71
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: lrrc71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6054604..6082294)
location: region:6054604-6082294:-1
so has part: feature:6054604-6082294:-1:exon
subclass of: SO_0000010

125487845
type: Gene
SIO_000068: ncbigene

position:6054604:-1
position: 6054604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6082294:-1
position: 6082294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6054604-6082294:-1:exon

lrrc71
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lrrc71
product: leucine rich repeat containing 71
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620285.1
SIO_010081: lrrc71
subclass of: SO_0000673
so part of: lrrc71
location: complement(join(6054604..6054653,6068983..6069146,6070270..6070338,6072382..6072456,6073534..6073609,6079521..6079661,6080289..6080408,6082209..6082294))
location: region:6054604-6082294:-1
so has part: feature:6082209-6082294:-1:exon
so has part: feature:6080289-6080408:-1:exon
so has part: feature:6079521-6079661:-1:exon
so has part: feature:6073534-6073609:-1:exon
so has part: feature:6072382-6072456:-1:exon
so has part: feature:6070270-6070338:-1:exon
so has part: feature:6068983-6069146:-1:exon
so has part: feature:6054604-6054653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6082209-6082294:-1:exon

position:6082209:-1
position: 6082209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6080289-6080408:-1:exon

position:6080289:-1
position: 6080289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6080408:-1
position: 6080408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6079521-6079661:-1:exon

position:6079521:-1
position: 6079521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6079661:-1
position: 6079661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6073534-6073609:-1:exon

position:6073534:-1
position: 6073534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6073609:-1
position: 6073609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6072382-6072456:-1:exon

position:6072382:-1
position: 6072382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6072456:-1
position: 6072456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6070270-6070338:-1:exon

position:6070270:-1
position: 6070270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6070338:-1
position: 6070338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6068983-6069146:-1:exon

position:6068983:-1
position: 6068983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6069146:-1
position: 6069146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6054604-6054653:-1:exon

position:6054653:-1
position: 6054653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrrc71
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lrrc71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 71
translation: MGKKVEKVIKEKPVTPAEEEGPKTAEDYVCTGNLEHDLTEICNRLEILEMPIVTLRHPGITVSGMFDEMESLTPSDVSSAPPLKDQISFFRPSVQVELENDDPKQVKAIYIRGWMIDQRYIFIFQKCLPALSNLHTINLWNVGLTETTFAAFLIILRQCFSLKSVVLDGNPIAGHPYHQLLSEDSQFQNLTLRNNKIDDAGAKLIGEALSTIKKSNKTVITLNLSFNHITDEGAGYIADVNSSGLGFVTMGEFRLL
SIO_010081: lrrc71
subclass of: SO_0000673
so part of: lrrc71
location: complement(join(6054604..6054653,6068983..6069146,6070270..6070338,6072382..6072456,6073534..6073609,6079521..6079661,6080289..6080408,6082209..6082284))
location: region:6054604-6082284:-1
so has part: feature:6082209-6082284:-1:exon
so has part: feature:6080289-6080408:-1:exon
so has part: feature:6079521-6079661:-1:exon
so has part: feature:6073534-6073609:-1:exon
so has part: feature:6072382-6072456:-1:exon
so has part: feature:6070270-6070338:-1:exon
so has part: feature:6068983-6069146:-1:exon
so has part: feature:6054604-6054653:-1:exon

XP_048476242.1
type: Protein
SIO_000068: ncbiprotein

position:6082284:-1
position: 6082284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6082209-6082284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6080289-6080408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6079521-6079661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6073534-6073609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6072382-6072456:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6070270-6070338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6068983-6069146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6054604-6054653:-1:exon

LOC125487869
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6086943..6095619
location: region:6086943-6095619:1
so has part: feature:6086943-6095619:1:exon
subclass of: SO_0000010

125487869
type: Gene
SIO_000068: ncbigene

position:6086943:1
position: 6086943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6095619:1
position: 6095619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6086943-6095619:1:exon

LOC125487869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487869
product: prelamin-A/C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048620338.1
SIO_010081: LOC125487869
subclass of: SO_0000673
so part of: LOC125487869
location: join(6086943..6087079,6088543..6088897,6094860..6095619)
location: region:6086943-6095619:1
so has part: feature:6086943-6087079:1:exon
so has part: feature:6088543-6088897:1:exon
so has part: feature:6094860-6095619:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6086943-6087079:1:exon

position:6087079:1
position: 6087079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6088543-6088897:1:exon

position:6088543:1
position: 6088543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6088897:1
position: 6088897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6094860-6095619:1:exon

position:6094860:1
position: 6094860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prelamin-A/C-like
translation: MQTPGQKRGNRSNASTPLSPTKISRLQEKEDLQNLNDRLAVYIDKVRSLEAENAGLRLRISESEEITSREVVNIKAMYENELADARKTLDNVAKEKARMQLDLGKLREEFNELKTRAGPKTETEEGGVSEENSKSQGQTSLEILGELGGAWFLRLNSLIYPCVELDSERMSVVYSRIASLQFSTGTLSPTFPSPGFCTPSQSLDSETGS
SIO_010081: LOC125487869
subclass of: SO_0000673
so part of: LOC125487869
location: join(6088551..6088897,6094860..6095142)
location: region:6088551-6095142:1
so has part: feature:6088551-6088897:1:exon
so has part: feature:6094860-6095142:1:exon

XP_048476295.1
type: Protein
SIO_000068: ncbiprotein

position:6088551:1
position: 6088551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6095142:1
position: 6095142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6088551-6088897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6094860-6095142:1:exon

prcc
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: prcc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6096297..6122422
location: region:6096297-6122422:1
so has part: feature:6096297-6122422:1:exon
subclass of: SO_0000010

109924622
type: Gene
SIO_000068: ncbigene

position:6096297:1
position: 6096297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6122422:1
position: 6122422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6096297-6122422:1:exon

prcc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: prcc
product: proline rich mitotic checkpoint control factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 4 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620286.1
SIO_010081: prcc
subclass of: SO_0000673
so part of: prcc
location: join(6096297..6096389,6097331..6097446,6111681..6111801,6113885..6114478,6116483..6116572,6119620..6119763,6122249..6122422)
location: region:6096297-6122422:1
so has part: feature:6096297-6096389:1:exon
so has part: feature:6097331-6097446:1:exon
so has part: feature:6111681-6111801:1:exon
so has part: feature:6113885-6114478:1:exon
so has part: feature:6116483-6116572:1:exon
so has part: feature:6119620-6119763:1:exon
so has part: feature:6122249-6122422:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6096297-6096389:1:exon

position:6096389:1
position: 6096389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6097331-6097446:1:exon

position:6097331:1
position: 6097331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6097446:1
position: 6097446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6111681-6111801:1:exon

position:6111681:1
position: 6111681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6111801:1
position: 6111801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6113885-6114478:1:exon

position:6113885:1
position: 6113885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6114478:1
position: 6114478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6116483-6116572:1:exon

position:6116483:1
position: 6116483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6116572:1
position: 6116572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6119620-6119763:1:exon

position:6119620:1
position: 6119620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6119763:1
position: 6119763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6122249-6122422:1:exon

position:6122249:1
position: 6122249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prcc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: prcc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein PRCC
translation: MGCGANGGSLVAVLKPSCLAAVLNPPYHWALLDLALNDAKKQLHDEMLRRVESENRAQTLQEELDFQRNLYATAWGRVGLVSTCHRLTVPPYLFQTDSDDDEPVQKRTSQGSGSGLGLSALLPQPRNLAVKEMDRPLLPYPFTKSQRPAAKASGQPKGAPRATVMTTPSPSAIKAASKNAAKQLAKHIMNEEASEEEEEEEEVEAERGEGDEEDQQAVSFFSLSETRSELSAGGLTGGEGPIPALAPAVPPNPLNPADAPLEFNRSTAPAPGGSESGFPPGPGLEFGNQYPAEFTGPGTEQTALPYYQDYYSNYYQDPDPALAPAPDEELNTFMNDEAFKRLQGKRNRGKEEVSFLEIKGDEQLSGSQQWLMKSLSEEKDMKSFSKKRGEQPTSQQRRKHQITYLIHQVRVMFTAHRTHSPHPWARCHSVQPCVAEGRSATYP
SIO_010081: prcc
subclass of: SO_0000673
so part of: prcc
location: join(6096297..6096389,6097331..6097446,6111681..6111801,6113885..6114478,6116483..6116572,6119620..6119763,6122249..6122422)
location: region:6096297-6122422:1
so has part: feature:6096297-6096389:1:exon
so has part: feature:6097331-6097446:1:exon
so has part: feature:6111681-6111801:1:exon
so has part: feature:6113885-6114478:1:exon
so has part: feature:6116483-6116572:1:exon
so has part: feature:6119620-6119763:1:exon
so has part: feature:6122249-6122422:1:exon

XP_048476243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6096297-6096389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6097331-6097446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6111681-6111801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6113885-6114478:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6116483-6116572:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6119620-6119763:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6122249-6122422:1:exon

LOC125487846
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6123909..6136856
location: region:6123909-6136856:1
so has part: feature:6123909-6136856:1:exon
subclass of: SO_0000010

125487846
type: Gene
SIO_000068: ncbigene

position:6123909:1
position: 6123909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6136856:1
position: 6136856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6123909-6136856:1:exon

LOC125487846
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487846
product: RNA-binding protein MEX3B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620287.1
SIO_010081: LOC125487846
subclass of: SO_0000673
so part of: LOC125487846
location: join(6123909..6124350,6135086..6135805,6135837..6136037,6136660..6136856)
location: region:6123909-6136856:1
so has part: feature:6123909-6124350:1:exon
so has part: feature:6135086-6135805:1:exon
so has part: feature:6135837-6136037:1:exon
so has part: feature:6136660-6136856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6123909-6124350:1:exon

position:6124350:1
position: 6124350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6135086-6135805:1:exon

position:6135086:1
position: 6135086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6135805:1
position: 6135805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6135837-6136037:1:exon

position:6135837:1
position: 6135837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6136037:1
position: 6136037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6136660-6136856:1:exon

position:6136660:1
position: 6136660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487846
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein MEX3B-like
translation: MPSSELLMEQSGTLELVVEMEMGLGMGRMLEDEQRALQLALDQLSMLGLSEEQEQAELLADGEEEENVNNNNNNTSAGSGHHRHQHHRESYLAALYEGGEAKRKSCNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIISAAEHFSLIRASRNKDGPAPGAVPVPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPANVDRAREEIEAHIAVRTGGLVELNDENDFHCNGVEAGYGGRAPKPWPKLALPAGRKPLASFRGNGPDPFYGNAKPADLHHHQHHACYGNGAAYGEAYFGAEGREGPPDAHRWPPAAAAPPPPPPPRHAASRECQVCFESEVTAALVPCGHNLFCMECANRICQRSNPHCPACLSTVTQAIPGKQLALCYLSHRCPTDGTSYWHADQTIFQNSEPLLTSLPFSFRSMVDVQADAVMRYCVLSKSDG
SIO_010081: LOC125487846
subclass of: SO_0000673
so part of: LOC125487846
location: join(6123969..6124350,6135086..6135805,6135837..6136037,6136660..6136856)
location: region:6123969-6136856:1
so has part: feature:6123969-6124350:1:exon
so has part: feature:6135086-6135805:1:exon
so has part: feature:6135837-6136037:1:exon
so has part: feature:6136660-6136856:1:exon

XP_048476244.1
type: Protein
SIO_000068: ncbiprotein

position:6123969:1
position: 6123969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6123969-6124350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6135086-6135805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6135837-6136037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6136660-6136856:1:exon

LOC125487870
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6139087..6145920)
location: region:6139087-6145920:-1
so has part: feature:6139087-6145920:-1:exon
subclass of: SO_0000010

125487870
type: Gene
SIO_000068: ncbigene

position:6139087:-1
position: 6139087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6145920:-1
position: 6145920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6139087-6145920:-1:exon

LOC125487870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487870
product: NAD(P)H-hydrate epimerase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_048620339.1
SIO_010081: LOC125487870
subclass of: SO_0000673
so part of: LOC125487870
location: complement(join(6139087..6139750,6144104..6144212,6145604..6145920))
location: region:6139087-6145920:-1
so has part: feature:6145604-6145920:-1:exon
so has part: feature:6144104-6144212:-1:exon
so has part: feature:6139087-6139750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6145604-6145920:-1:exon

position:6145604:-1
position: 6145604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6144104-6144212:-1:exon

position:6144104:-1
position: 6144104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6144212:-1
position: 6144212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6139087-6139750:-1:exon

position:6139750:-1
position: 6139750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase-like
translation: MFGLRTLLGLSVIAWSRCATRGSGSLVSRAPAFLCPSPRGQLIAGLMDRKCSTGGEKSVKYLGQEEAQAIDQELFSEYKFSVDQLMELAGLSCATAIAKAYPLSSLRKETPTVLVLCGPGNNGGDGLVCARHLKLFVSSDTLHSFNQRSKVPRYAFNNERTAFPTVSHQTLPGTGTAWG
SIO_010081: LOC125487870
subclass of: SO_0000673
so part of: LOC125487870
location: complement(join(6139508..6139750,6144104..6144212,6145604..6145791))
location: region:6139508-6145791:-1
so has part: feature:6145604-6145791:-1:exon
so has part: feature:6144104-6144212:-1:exon
so has part: feature:6139508-6139750:-1:exon

XP_048476296.1
type: Protein
SIO_000068: ncbiprotein

position:6139508:-1
position: 6139508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6145791:-1
position: 6145791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6145604-6145791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6144104-6144212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6139508-6139750:-1:exon

LOC109923658
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6162151..6197609)
location: region:6162151-6197609:-1
so has part: feature:6162151-6197609:-1:exon
subclass of: SO_0000010

109923658
type: Gene
SIO_000068: ncbigene

position:6162151:-1
position: 6162151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6197609:-1
position: 6197609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6162151-6197609:-1:exon

LOC109923658
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923658
product: tetratricopeptide repeat protein 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620340.1
SIO_010081: LOC109923658
subclass of: SO_0000673
so part of: LOC109923658
location: complement(join(6162151..6162423,6165347..6165448,6167566..6167620,6169192..6169262,6172673..6172844,6175563..6175726,6176245..6176327,6177194..6177313,6180361..6180482,6183953..6184081,6189613..6189828,6193890..6194652,6197496..6197609))
location: region:6162151-6197609:-1
so has part: feature:6197496-6197609:-1:exon
so has part: feature:6193890-6194652:-1:exon
so has part: feature:6189613-6189828:-1:exon
so has part: feature:6183953-6184081:-1:exon
so has part: feature:6180361-6180482:-1:exon
so has part: feature:6177194-6177313:-1:exon
so has part: feature:6176245-6176327:-1:exon
so has part: feature:6175563-6175726:-1:exon
so has part: feature:6172673-6172844:-1:exon
so has part: feature:6169192-6169262:-1:exon
so has part: feature:6167566-6167620:-1:exon
so has part: feature:6165347-6165448:-1:exon
so has part: feature:6162151-6162423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6197496-6197609:-1:exon

position:6197496:-1
position: 6197496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6193890-6194652:-1:exon

position:6193890:-1
position: 6193890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6194652:-1
position: 6194652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6189613-6189828:-1:exon

position:6189613:-1
position: 6189613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6189828:-1
position: 6189828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6183953-6184081:-1:exon

position:6183953:-1
position: 6183953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6184081:-1
position: 6184081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6180361-6180482:-1:exon

position:6180361:-1
position: 6180361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6180482:-1
position: 6180482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6177194-6177313:-1:exon

position:6177194:-1
position: 6177194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6177313:-1
position: 6177313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6176245-6176327:-1:exon

position:6176245:-1
position: 6176245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6176327:-1
position: 6176327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6175563-6175726:-1:exon

position:6175563:-1
position: 6175563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6175726:-1
position: 6175726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6172673-6172844:-1:exon

position:6172673:-1
position: 6172673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6172844:-1
position: 6172844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6169192-6169262:-1:exon

position:6169192:-1
position: 6169192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6169262:-1
position: 6169262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6167566-6167620:-1:exon

position:6167566:-1
position: 6167566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6167620:-1
position: 6167620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6165347-6165448:-1:exon

position:6165347:-1
position: 6165347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6165448:-1
position: 6165448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6162151-6162423:-1:exon

position:6162423:-1
position: 6162423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109923658
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 24
translation: MSSDLATTDEPSGVIQGQRENEKGPRRKKHHNSGEPVERRQDVLEIQAEIESLTRAGSQALAQERCGEALTAFKKAFLASLDVTEQQVQRACAFNLGAAYIASGRPAKGLDFLLRSQPDKGGERQGDLHFNLGLAHEGLGDPPAAIEYYQRALAHYQSQQGHGEADTHMKLAGCRARAGELDQAGRCFRRAGLAYRRAGSLDLAAIALNEAACHMLQCQCFTAAEITEVLNECRTVCTNMQNKALLGTLYNDVGLSYSQLKMFLQAAECFEMALPYCQRDGLDQRKEAIVLQNLGAVYNTSGNYSKALAFHQSAAALHGSLGSRNAQGQCFCNLAYAYSQLGDHEDTAENYLHALQAFKDTGDFHGQWQACEGLGAAKFRLGDPERAILYYKQALAALGKSQEPTGSAQERIVNKMTDAIQYKLSLNSALPHASGIPPAMPLKYLPGSFPRTNPLRAPAPVNGHRMQILQLGDNQTPPYPSICLRTQHICQERGHSQHRLPSRGREGPGTSAAETEQSLSGDLAEVAEIESAEGPWDNSGNVHRNGAEAEEKEKDDLAVVTEDEDLYQEDKLYSNGPAQENRNLNNTYLQPDPTYLNNPQLRTTQSDHFYETLQTRQMPAVEEGMASGSQKSGRSSDGNDQDSPKWRRNWESKMCKIIN
SIO_010081: LOC109923658
subclass of: SO_0000673
so part of: LOC109923658
location: complement(join(6162417..6162423,6165347..6165448,6167566..6167620,6169192..6169262,6172673..6172844,6175563..6175726,6176245..6176327,6177194..6177313,6180361..6180482,6183953..6184081,6189613..6189828,6193890..6194628))
location: region:6162417-6194628:-1
so has part: feature:6193890-6194628:-1:exon
so has part: feature:6189613-6189828:-1:exon
so has part: feature:6183953-6184081:-1:exon
so has part: feature:6180361-6180482:-1:exon
so has part: feature:6177194-6177313:-1:exon
so has part: feature:6176245-6176327:-1:exon
so has part: feature:6175563-6175726:-1:exon
so has part: feature:6172673-6172844:-1:exon
so has part: feature:6169192-6169262:-1:exon
so has part: feature:6167566-6167620:-1:exon
so has part: feature:6165347-6165448:-1:exon
so has part: feature:6162417-6162423:-1:exon

XP_048476297.1
type: Protein
SIO_000068: ncbiprotein

position:6162417:-1
position: 6162417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6194628:-1
position: 6194628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6193890-6194628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6189613-6189828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6183953-6184081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6180361-6180482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6177194-6177313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6176245-6176327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6175563-6175726:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6172673-6172844:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6169192-6169262:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6167566-6167620:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6165347-6165448:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6162417-6162423:-1:exon

iqgap3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: iqgap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6198114..6293918
location: region:6198114-6293918:1
so has part: feature:6198114-6293918:1:exon
subclass of: SO_0000010

109937716
type: Gene
SIO_000068: ncbigene

position:6198114:1
position: 6198114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6293918:1
position: 6293918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6198114-6293918:1:exon

iqgap3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: iqgap3
product: IQ motif containing GTPase activating protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620288.1
SIO_010081: iqgap3
subclass of: SO_0000673
so part of: iqgap3
location: join(6198114..6198211,6214063..6214130,6216084..6216197,6218782..6218969,6222338..6222425,6223963..6224126,6227904..6227991,6229799..6229962,6230601..6230761,6232196..6232320,6238275..6238438,6238559..6238649,6239452..6239619,6241992..6242134,6243346..6243516,6248680..6248763,6252151..6252222,6254124..6254193,6255855..6256063,6257884..6258036,6259144..6259307,6261702..6261926,6264591..6264731,6272562..6272646,6273605..6273837,6278989..6279121,6280438..6280540,6281368..6281518,6282754..6282841,6283668..6283880,6286005..6286171,6286707..6286832,6289604..6289712,6293390..6293918)
location: region:6198114-6293918:1
so has part: feature:6198114-6198211:1:exon
so has part: feature:6214063-6214130:1:exon
so has part: feature:6216084-6216197:1:exon
so has part: feature:6218782-6218969:1:exon
so has part: feature:6222338-6222425:1:exon
so has part: feature:6223963-6224126:1:exon
so has part: feature:6227904-6227991:1:exon
so has part: feature:6229799-6229962:1:exon
so has part: feature:6230601-6230761:1:exon
so has part: feature:6232196-6232320:1:exon
so has part: feature:6238275-6238438:1:exon
so has part: feature:6238559-6238649:1:exon
so has part: feature:6239452-6239619:1:exon
so has part: feature:6241992-6242134:1:exon
so has part: feature:6243346-6243516:1:exon
so has part: feature:6248680-6248763:1:exon
so has part: feature:6252151-6252222:1:exon
so has part: feature:6254124-6254193:1:exon
so has part: feature:6255855-6256063:1:exon
so has part: feature:6257884-6258036:1:exon
so has part: feature:6259144-6259307:1:exon
so has part: feature:6261702-6261926:1:exon
so has part: feature:6264591-6264731:1:exon
so has part: feature:6272562-6272646:1:exon
so has part: feature:6273605-6273837:1:exon
so has part: feature:6278989-6279121:1:exon
so has part: feature:6280438-6280540:1:exon
so has part: feature:6281368-6281518:1:exon
so has part: feature:6282754-6282841:1:exon
so has part: feature:6283668-6283880:1:exon
so has part: feature:6286005-6286171:1:exon
so has part: feature:6286707-6286832:1:exon
so has part: feature:6289604-6289712:1:exon
so has part: feature:6293390-6293918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6198114-6198211:1:exon

position:6198211:1
position: 6198211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6214063-6214130:1:exon

position:6214063:1
position: 6214063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6214130:1
position: 6214130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6216084-6216197:1:exon

position:6216084:1
position: 6216084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6216197:1
position: 6216197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6218782-6218969:1:exon

position:6218782:1
position: 6218782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6218969:1
position: 6218969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6222338-6222425:1:exon

position:6222338:1
position: 6222338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6222425:1
position: 6222425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6223963-6224126:1:exon

position:6223963:1
position: 6223963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6224126:1
position: 6224126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6227904-6227991:1:exon

position:6227904:1
position: 6227904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6227991:1
position: 6227991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6229799-6229962:1:exon

position:6229799:1
position: 6229799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6229962:1
position: 6229962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6230601-6230761:1:exon

position:6230601:1
position: 6230601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6230761:1
position: 6230761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6232196-6232320:1:exon

position:6232196:1
position: 6232196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6232320:1
position: 6232320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6238275-6238438:1:exon

position:6238275:1
position: 6238275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6238438:1
position: 6238438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6238559-6238649:1:exon

position:6238559:1
position: 6238559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6238649:1
position: 6238649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6239452-6239619:1:exon

position:6239452:1
position: 6239452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6239619:1
position: 6239619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6241992-6242134:1:exon

position:6241992:1
position: 6241992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6242134:1
position: 6242134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6243346-6243516:1:exon

position:6243346:1
position: 6243346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6243516:1
position: 6243516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6248680-6248763:1:exon

position:6248680:1
position: 6248680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6248763:1
position: 6248763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6252151-6252222:1:exon

position:6252151:1
position: 6252151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6252222:1
position: 6252222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6254124-6254193:1:exon

position:6254124:1
position: 6254124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6254193:1
position: 6254193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6255855-6256063:1:exon

position:6255855:1
position: 6255855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6256063:1
position: 6256063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6257884-6258036:1:exon

position:6257884:1
position: 6257884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6258036:1
position: 6258036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6259144-6259307:1:exon

position:6259144:1
position: 6259144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6259307:1
position: 6259307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6261702-6261926:1:exon

position:6261702:1
position: 6261702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6261926:1
position: 6261926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6264591-6264731:1:exon

position:6264591:1
position: 6264591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6264731:1
position: 6264731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6272562-6272646:1:exon

position:6272562:1
position: 6272562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6272646:1
position: 6272646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6273605-6273837:1:exon

position:6273605:1
position: 6273605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6273837:1
position: 6273837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6278989-6279121:1:exon

position:6278989:1
position: 6278989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6279121:1
position: 6279121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6280438-6280540:1:exon

position:6280438:1
position: 6280438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6280540:1
position: 6280540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6281368-6281518:1:exon

position:6281368:1
position: 6281368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6281518:1
position: 6281518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6282754-6282841:1:exon

position:6282754:1
position: 6282754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6282841:1
position: 6282841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6283668-6283880:1:exon

position:6283668:1
position: 6283668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6283880:1
position: 6283880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6286005-6286171:1:exon

position:6286005:1
position: 6286005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6286171:1
position: 6286171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6286707-6286832:1:exon

position:6286707:1
position: 6286707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6286832:1
position: 6286832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:6289604-6289712:1:exon

position:6289604:1
position: 6289604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6289712:1
position: 6289712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:6293390-6293918:1:exon

position:6293390:1
position: 6293390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

iqgap3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: iqgap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3
translation: MESEVDSGGKRQGGCKWEKYKSRFNLCNICIKNLYLFKLGLAPQIQDLYGKVNFTEEEINNMKTELEKYGIQMPSFSKIGGILANELSIDEATVHAAVIAINDAIDRGLAAQTMVALHNPNAMLVNLVDGLALVYQEMLHQAKSEKAANARNRANACKSEPAEYKDVYEELLTQAEIQGNVNKVNVHAALEYVDEALEKRDVQALHSALQREALALHEVNRENTEWYMEQLIIDREQKALELGMMEPLEKEELQAAVDAANENSNVHLCMMQAVSRINAAVRKGVPDETLKELMNSNAKLPDVYLFAAGLYQRELTALQQQKPQGELTQEELYIAVEMLSAVALINRALEAGDFGAFWKHLISAATGLTDIQDCCAQRYFAELTILKQQGQRNGVAMLSWNDLQMCLHDVNFAVEKEHDRIVAIGLINEALDRNDPERTIAALLMPSAGLADLDFPAAKRYHDVLAAARRQKAKDTRDEAVVLWIEEIQDGIHKANQDGQAARKMSLGIAAINQAIKEGVASQTLRVLRSPSVALCSVVPECASTYQSELATLMQIKVEMGDNQSCWVKHKLKDDSVYYFNLETLEGSWERPRGFVQSSTQISREEIQATVTGVTAVYNRERLWKANEGMITRLQAHMRGYLIRKDLCARKHFLQKQLPAIVKIQSHWRGYRQRRDYQKRLHHFQDNADAVIKIQSWVRMWQAKRRYRARLQHFKNNIASVVKIQAFARANKARGDYRLLVHAQNPPLSVVRKFAHLLEHSDHDFREEWELMRLREEVVQHIRSNQRLEQDLNIMDIKIGLLVKNRITLQEVVSHCKKLTKKNKGQLADLMVIDKQKGLKALSREKREKLEAYQHLFYLLQTKPVYLAKLIFQMPQNRSTKFMDSVIFSLYNYAANQREDYLLLRLFTTALREEIKSKVDQVREIVTGNPTVTKLVVSFYRNVRGQNALREILGPVVKEILQDKSLSIKTDPVDTYKSWVNQMETETGQRSKLPYEVTPEQALTHHEVQRRLDISIHNLRAATDKFLAAIVSGMDKIPYGMRYTAKVLKNSLYEKFPGVTEDELLKIVGNLLYYRYMNPAIVAPDGFNIIDVSAGGGLHTDHRRNLGSIAKLLQHAASSKTFERETGQLRTMNDYLYHSQQRFREFFRAACDVPEPEEWFNVDEYSEMVSLNKPVIYITVGELINTHKLLLQHQDSLLAECSDPLHELLKDLGDVPTVESLLGEGSVDANDPHADQTMAQLNKMEVSLTLTNKFDIYKSSGDGADNTRGLLLSTKQLIVDIIRSQAGDTLVEILQTSASTDQVADHHRLVQRRALRDARTPEKLKRNQSLVHDGKLSIEEKKRKIVRSLRMLEAAGVISAANGYQQLVNEIARDIQNQRRYRQQRKAELAKLRETLHRMNSKTAFYEEQIDYYNRYIKTCLDNLATNGQGLGKKAAASKGKKAKAPSLNYTAAHLREKGVLLEIEDLPISQFRNVIFDIVQSEEVGTFDVKARFMGVDMEKFQLKYQDLLQLQYEGVAVMKMFDKAKVNVNLLIFLLNKKFFKK
SIO_010081: iqgap3
subclass of: SO_0000673
so part of: iqgap3
location: join(6198114..6198211,6214063..6214130,6216084..6216197,6218782..6218969,6222338..6222425,6223963..6224126,6227904..6227991,6229799..6229962,6230601..6230761,6232196..6232320,6238275..6238438,6238559..6238649,6239452..6239619,6241992..6242134,6243346..6243516,6248680..6248763,6252151..6252222,6254124..6254193,6255855..6256063,6257884..6258036,6259144..6259307,6261702..6261926,6264591..6264731,6272562..6272646,6273605..6273837,6278989..6279121,6280438..6280540,6281368..6281518,6282754..6282841,6283668..6283880,6286005..6286171,6286707..6286832,6289604..6289712,6293390..6293503)
location: region:6198114-6293503:1
so has part: feature:6198114-6198211:1:exon
so has part: feature:6214063-6214130:1:exon
so has part: feature:6216084-6216197:1:exon
so has part: feature:6218782-6218969:1:exon
so has part: feature:6222338-6222425:1:exon
so has part: feature:6223963-6224126:1:exon
so has part: feature:6227904-6227991:1:exon
so has part: feature:6229799-6229962:1:exon
so has part: feature:6230601-6230761:1:exon
so has part: feature:6232196-6232320:1:exon
so has part: feature:6238275-6238438:1:exon
so has part: feature:6238559-6238649:1:exon
so has part: feature:6239452-6239619:1:exon
so has part: feature:6241992-6242134:1:exon
so has part: feature:6243346-6243516:1:exon
so has part: feature:6248680-6248763:1:exon
so has part: feature:6252151-6252222:1:exon
so has part: feature:6254124-6254193:1:exon
so has part: feature:6255855-6256063:1:exon
so has part: feature:6257884-6258036:1:exon
so has part: feature:6259144-6259307:1:exon
so has part: feature:6261702-6261926:1:exon
so has part: feature:6264591-6264731:1:exon
so has part: feature:6272562-6272646:1:exon
so has part: feature:6273605-6273837:1:exon
so has part: feature:6278989-6279121:1:exon
so has part: feature:6280438-6280540:1:exon
so has part: feature:6281368-6281518:1:exon
so has part: feature:6282754-6282841:1:exon
so has part: feature:6283668-6283880:1:exon
so has part: feature:6286005-6286171:1:exon
so has part: feature:6286707-6286832:1:exon
so has part: feature:6289604-6289712:1:exon
so has part: feature:6293390-6293503:1:exon

XP_048476245.1
type: Protein
SIO_000068: ncbiprotein

position:6293503:1
position: 6293503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6198114-6198211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6214063-6214130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216084-6216197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6218782-6218969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6222338-6222425:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6223963-6224126:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6227904-6227991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6229799-6229962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6230601-6230761:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6232196-6232320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6238275-6238438:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6238559-6238649:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6239452-6239619:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6241992-6242134:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6243346-6243516:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6248680-6248763:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6252151-6252222:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6254124-6254193:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6255855-6256063:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6257884-6258036:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6259144-6259307:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6261702-6261926:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6264591-6264731:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6272562-6272646:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6273605-6273837:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6278989-6279121:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6280438-6280540:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6281368-6281518:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6282754-6282841:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6283668-6283880:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6286005-6286171:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6286707-6286832:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6289604-6289712:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6293390-6293503:1:exon

LOC109919320
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109919320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6349726..6387588
location: region:6349726-6387588:1
so has part: feature:6349726-6387588:1:exon
subclass of: SO_0000010

109919320
type: Gene
SIO_000068: ncbigene

position:6349726:1
position: 6349726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6387588:1
position: 6387588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6349726-6387588:1:exon

LOC109919320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919320
product: transcriptional repressor p66-beta
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620289.1
SIO_010081: LOC109919320
subclass of: SO_0000673
so part of: LOC109919320
location: join(6349726..6349750,6356528..6356866,6358650..6358779,6360591..6360722,6372548..6373033,6374043..6374162,6379732..6379915,6382422..6387588)
location: region:6349726-6387588:1
so has part: feature:6349726-6349750:1:exon
so has part: feature:6356528-6356866:1:exon
so has part: feature:6358650-6358779:1:exon
so has part: feature:6360591-6360722:1:exon
so has part: feature:6372548-6373033:1:exon
so has part: feature:6374043-6374162:1:exon
so has part: feature:6379732-6379915:1:exon
so has part: feature:6382422-6387588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6349726-6349750:1:exon

position:6349750:1
position: 6349750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6356528-6356866:1:exon

position:6356528:1
position: 6356528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6356866:1
position: 6356866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6358650-6358779:1:exon

position:6358650:1
position: 6358650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6358779:1
position: 6358779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6360591-6360722:1:exon

position:6360591:1
position: 6360591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6360722:1
position: 6360722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6372548-6373033:1:exon

position:6372548:1
position: 6372548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6373033:1
position: 6373033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6374043-6374162:1:exon

position:6374043:1
position: 6374043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6374162:1
position: 6374162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6379732-6379915:1:exon

position:6379732:1
position: 6379732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6379915:1
position: 6379915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6382422-6387588:1:exon

position:6382422:1
position: 6382422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109919320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor p66-beta
translation: MDRMTDDALRLHLLKRGLDRAEERDDVVAKRLKMEGHEAMERLKMLALLKRKDMASPEMPQDLVVKPEHQKVGEEKLNGSLKPRLEIRSVGKVGKENMGDEPVDMSAHKSDADRERSTPSPDIIVLSDNEASSPRANGRYEDRNKVANLELFKGKGPEERQMIIKQLRDELRLEEARLVLLKKLRQSQIQKENVVQKNPVGFLKSLLTLILCHDIVSCVPVCRLFNQVGHHTLIFFYPSTFPDSRMLSQPAEHSGTTVVRVAVTPGGSHVFLLSVSLSLSLFPCVLSSLAAGKGRFQLTQIDPFVCSQCRTDFTPHWKQERSGNILCEQCVTSNQKKALKAEHTNRLKTAFVKALQQEQEIEQRIQQQAAAVSAPPTSAPTGVPMSKPEPVIRHHPLRQQPPQSQSSLQRGLHTSARSVLSNFAQGPQMHVASGLLGMPGKHAVRSGAPSRGQRPYFTSSGVSMSYMNTGVGGQKGSSLADRQREYLLDMIPPRPISQSISTPK
SIO_010081: LOC109919320
subclass of: SO_0000673
so part of: LOC109919320
location: join(6356538..6356866,6358650..6358779,6360591..6360722,6372548..6373033,6374043..6374162,6379732..6379915,6382422..6382555)
location: region:6356538-6382555:1
so has part: feature:6356538-6356866:1:exon
so has part: feature:6358650-6358779:1:exon
so has part: feature:6360591-6360722:1:exon
so has part: feature:6372548-6373033:1:exon
so has part: feature:6374043-6374162:1:exon
so has part: feature:6379732-6379915:1:exon
so has part: feature:6382422-6382555:1:exon

XP_048476246.1
type: Protein
SIO_000068: ncbiprotein

position:6356538:1
position: 6356538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6382555:1
position: 6382555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6356538-6356866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6358650-6358779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6360591-6360722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6372548-6373033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6374043-6374162:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6379732-6379915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6382422-6382555:1:exon

ubqln4
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ubqln4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6463532..6488458)
location: region:6463532-6488458:-1
so has part: feature:6463532-6488458:-1:exon
subclass of: SO_0000010

109923434
type: Gene
SIO_000068: ncbigene

position:6463532:-1
position: 6463532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6488458:-1
position: 6488458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6463532-6488458:-1:exon

ubqln4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ubqln4
product: ubiquilin 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620342.1
SIO_010081: ubqln4
subclass of: SO_0000673
so part of: ubqln4
location: complement(join(6463532..6464973,6466804..6467041,6468060..6468175,6470492..6470575,6473059..6473198,6476007..6476223,6476842..6477000,6478108..6478370,6479352..6479515,6488232..6488458))
location: region:6463532-6488458:-1
so has part: feature:6488232-6488458:-1:exon
so has part: feature:6479352-6479515:-1:exon
so has part: feature:6478108-6478370:-1:exon
so has part: feature:6476842-6477000:-1:exon
so has part: feature:6476007-6476223:-1:exon
so has part: feature:6473059-6473198:-1:exon
so has part: feature:6470492-6470575:-1:exon
so has part: feature:6468060-6468175:-1:exon
so has part: feature:6466804-6467041:-1:exon
so has part: feature:6463532-6464973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6488232-6488458:-1:exon

position:6488232:-1
position: 6488232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6479352-6479515:-1:exon

position:6479352:-1
position: 6479352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6479515:-1
position: 6479515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6478108-6478370:-1:exon

position:6478108:-1
position: 6478108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6478370:-1
position: 6478370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6476842-6477000:-1:exon

position:6476842:-1
position: 6476842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6477000:-1
position: 6477000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6476007-6476223:-1:exon

position:6476007:-1
position: 6476007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6476223:-1
position: 6476223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6473059-6473198:-1:exon

position:6473059:-1
position: 6473059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6473198:-1
position: 6473198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6470492-6470575:-1:exon

position:6470492:-1
position: 6470492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6470575:-1
position: 6470575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6468060-6468175:-1:exon

position:6468060:-1
position: 6468060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6468175:-1
position: 6468175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6466804-6467041:-1:exon

position:6466804:-1
position: 6466804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6467041:-1
position: 6467041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6463532-6464973:-1:exon

position:6464973:-1
position: 6464973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ubqln4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ubqln4
product: ubiquilin 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620341.1
SIO_010081: ubqln4
subclass of: SO_0000673
so part of: ubqln4
location: complement(join(6463532..6464973,6466804..6467041,6468060..6468175,6470492..6470575,6473056..6473198,6476007..6476223,6476842..6477000,6478108..6478370,6479352..6479515,6488232..6488458))
location: region:6463532-6488458:-1
so has part: feature:6488232-6488458:-1:exon
so has part: feature:6479352-6479515:-1:exon
so has part: feature:6478108-6478370:-1:exon
so has part: feature:6476842-6477000:-1:exon
so has part: feature:6476007-6476223:-1:exon
so has part: feature:6473056-6473198:-1:exon
so has part: feature:6470492-6470575:-1:exon
so has part: feature:6468060-6468175:-1:exon
so has part: feature:6466804-6467041:-1:exon
so has part: feature:6463532-6464973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6488232-6488458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6479352-6479515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6478108-6478370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6476842-6477000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6476007-6476223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6473056-6473198:-1:exon

position:6473056:-1
position: 6473056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6470492-6470575:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6468060-6468175:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6466804-6467041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6463532-6464973:-1:exon

ubqln4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ubqln4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X2
translation: MMEYLHVIYSNFFSLSLFSLQFKNEISKRFKAKQEQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTAQRLQDPSTQPSTSSSAPSTEETSTRPEPPTGTVTSTSSVPSTATPTGTSTSSPSVLSGFGGIPGLGSLGMGSANFMELQQQMQRQLMSNPDMLAQIMENPFVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGGNPFTALGGGSDSNAQPSRTENREPLPNPWVPTSPASPATGSSSEGGNSTNQTTQPVSNPFGINAGTLGNGMFNSPGMQSLMQQISENPQLIQNMLSAPYMRSMMQSLSQNPDLASQILMNNPLFAGNTQLQDQLRLQMPVFLQQMQNPDVLSVMTNPRAMQALLQIQQGLQTLQNEAPGLLPGFSPAAPGSVGGVGGLGSLSSGSTPTTTAASSAAPTTQSTGGINTSPESPASVGPGAGASNPQQQLMQQMLQMLAGANTQVQNPEVRFQQQLEQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: ubqln4
subclass of: SO_0000673
so part of: ubqln4
location: complement(join(6464821..6464973,6466804..6467041,6468060..6468175,6470492..6470575,6473059..6473198,6476007..6476223,6476842..6477000,6478108..6478370,6479352..6479515,6488232..6488446))
location: region:6464821-6488446:-1
so has part: feature:6488232-6488446:-1:exon
so has part: feature:6479352-6479515:-1:exon
so has part: feature:6478108-6478370:-1:exon
so has part: feature:6476842-6477000:-1:exon
so has part: feature:6476007-6476223:-1:exon
so has part: feature:6473059-6473198:-1:exon
so has part: feature:6470492-6470575:-1:exon
so has part: feature:6468060-6468175:-1:exon
so has part: feature:6466804-6467041:-1:exon
so has part: feature:6464821-6464973:-1:exon

XP_048476299.1
type: Protein
SIO_000068: ncbiprotein

position:6464821:-1
position: 6464821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6488446:-1
position: 6488446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6488232-6488446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6479352-6479515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6478108-6478370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6476842-6477000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6476007-6476223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6473059-6473198:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6470492-6470575:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6468060-6468175:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6466804-6467041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6464821-6464973:-1:exon

ubqln4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ubqln4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X1
translation: MMEYLHVIYSNFFSLSLFSLQFKNEISKRFKAKQEQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTAQRLQDPSTQPSTSSSAPSTEETSTRPEPPTGTVTSTSSVPSTATPTGTSTSSPSVLSGFGGIPGLGSLGMGSANFMELQQQMQRQLMSNPDMLAQIMENPFVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGGNPFTALGGGSDSNAQPSRTENREPLPNPWVPTSPASPATGSSSEGGNSTNQTTQPVSNPFGINAGTLGNGMFNSPGMQSLMQQISENPQLIQNMLSAPYMRSMMQSLSQNPDLASQVILMNNPLFAGNTQLQDQLRLQMPVFLQQMQNPDVLSVMTNPRAMQALLQIQQGLQTLQNEAPGLLPGFSPAAPGSVGGVGGLGSLSSGSTPTTTAASSAAPTTQSTGGINTSPESPASVGPGAGASNPQQQLMQQMLQMLAGANTQVQNPEVRFQQQLEQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: ubqln4
subclass of: SO_0000673
so part of: ubqln4
location: complement(join(6464821..6464973,6466804..6467041,6468060..6468175,6470492..6470575,6473056..6473198,6476007..6476223,6476842..6477000,6478108..6478370,6479352..6479515,6488232..6488446))
location: region:6464821-6488446:-1
so has part: feature:6488232-6488446:-1:exon
so has part: feature:6479352-6479515:-1:exon
so has part: feature:6478108-6478370:-1:exon
so has part: feature:6476842-6477000:-1:exon
so has part: feature:6476007-6476223:-1:exon
so has part: feature:6473056-6473198:-1:exon
so has part: feature:6470492-6470575:-1:exon
so has part: feature:6468060-6468175:-1:exon
so has part: feature:6466804-6467041:-1:exon
so has part: feature:6464821-6464973:-1:exon

XP_048476298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6488232-6488446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6479352-6479515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6478108-6478370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6476842-6477000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6476007-6476223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6473056-6473198:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6470492-6470575:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6468060-6468175:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6466804-6467041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6464821-6464973:-1:exon

LOC109926288
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6502833..6514303
location: region:6502833-6514303:1
so has part: feature:6502833-6514303:1:exon
subclass of: SO_0000010

109926288
type: Gene
SIO_000068: ncbigene

position:6502833:1
position: 6502833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6514303:1
position: 6514303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6502833-6514303:1:exon

LOC109926288
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926288
product: tripartite motif-containing protein 46-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_048620290.1
SIO_010081: LOC109926288
subclass of: SO_0000673
so part of: LOC109926288
location: join(6502833..6503046,6509363..6509662,6512581..6512878,6513865..6514303)
location: region:6502833-6514303:1
so has part: feature:6502833-6503046:1:exon
so has part: feature:6509363-6509662:1:exon
so has part: feature:6512581-6512878:1:exon
so has part: feature:6513865-6514303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6502833-6503046:1:exon

position:6503046:1
position: 6503046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6509363-6509662:1:exon

position:6509363:1
position: 6509363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6509662:1
position: 6509662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6512581-6512878:1:exon

position:6512581:1
position: 6512581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6512878:1
position: 6512878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6513865-6514303:1:exon

position:6513865:1
position: 6513865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926288
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 46-like
translation: MGSMFSVPQQVEKGFTLMPQWRRLLVRRNFLRDFLCFPFCDSKECMLADLAQEGYSIRNTEKLIEAGHAGSVPDAPVIDTQRTYAYDQIYLCWRLPEDSAEAWHYEVEFRQAEHPPKGPRRWHRIEEVRGTGTAVGHLELDRVYALRVRGYNKAGYGEYSEEIYLRSPPAPVLHFLLDNKWGYSQDRLIVSKDQQAVRSVAGLPMLFAAEQIMTSCHLCIDLVVGDVALTQGKHYWACSVDPTSYLVKVGVGLESNLLEWFQVPQDVVSPRYDPDSGHDSGAEDATVDASPPYAFLTIGMGKVLLPQGSPLPSRDPSAGTAPLPSRLGVCLDYERGRVAFYDAVSFRSLWECGVDCSGPVCPAFCFVGGGGLYLQELVASRPEPKASGCSTHKGEEIKMEASPTTTSPLLPPKTPC
SIO_010081: LOC109926288
subclass of: SO_0000673
so part of: LOC109926288
location: join(6502833..6503046,6509363..6509662,6512581..6512878,6513865..6514303)
location: region:6502833-6514303:1
so has part: feature:6502833-6503046:1:exon
so has part: feature:6509363-6509662:1:exon
so has part: feature:6512581-6512878:1:exon
so has part: feature:6513865-6514303:1:exon

XP_048476247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6502833-6503046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6509363-6509662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6512581-6512878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6513865-6514303:1:exon

LOC109926555
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6522023..6557152)
location: region:6522023-6557152:-1
so has part: feature:6522023-6557152:-1:exon
subclass of: SO_0000010

109926555
type: Gene
SIO_000068: ncbigene

position:6522023:-1
position: 6522023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6557152:-1
position: 6557152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6522023-6557152:-1:exon

LOC109926555
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926555
product: myosin-10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 41 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048620291.1
SIO_010081: LOC109926555
subclass of: SO_0000673
so part of: LOC109926555
location: complement(join(6522023..6522198,6522339..6522462,6522857..6522994,6524706..6524912,6525311..6525442,6528100..6528208,6528405..6528565,6529135..6529204,6530045..6530166,6530548..6530744,6531099..6531213,6531970..6532143,6532242..6532415,6535318..6535470,6536202..6536320,6538352..6538447,6538688..6538831,6540105..6540203,6542159..6542222,6543437..6543529,6544059..6544076,6547851..6547953,6548214..6548241,6554411..6554567,6556937..6557152))
location: region:6522023-6557152:-1
so has part: feature:6556937-6557152:-1:exon
so has part: feature:6554411-6554567:-1:exon
so has part: feature:6548214-6548241:-1:exon
so has part: feature:6547851-6547953:-1:exon
so has part: feature:6544059-6544076:-1:exon
so has part: feature:6543437-6543529:-1:exon
so has part: feature:6542159-6542222:-1:exon
so has part: feature:6540105-6540203:-1:exon
so has part: feature:6538688-6538831:-1:exon
so has part: feature:6538352-6538447:-1:exon
so has part: feature:6536202-6536320:-1:exon
so has part: feature:6535318-6535470:-1:exon
so has part: feature:6532242-6532415:-1:exon
so has part: feature:6531970-6532143:-1:exon
so has part: feature:6531099-6531213:-1:exon
so has part: feature:6530548-6530744:-1:exon
so has part: feature:6530045-6530166:-1:exon
so has part: feature:6529135-6529204:-1:exon
so has part: feature:6528405-6528565:-1:exon
so has part: feature:6528100-6528208:-1:exon
so has part: feature:6525311-6525442:-1:exon
so has part: feature:6524706-6524912:-1:exon
so has part: feature:6522857-6522994:-1:exon
so has part: feature:6522339-6522462:-1:exon
so has part: feature:6522023-6522198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6556937-6557152:-1:exon

position:6556937:-1
position: 6556937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6554411-6554567:-1:exon

position:6554411:-1
position: 6554411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6554567:-1
position: 6554567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6548214-6548241:-1:exon

position:6548214:-1
position: 6548214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6548241:-1
position: 6548241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6547851-6547953:-1:exon

position:6547851:-1
position: 6547851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6547953:-1
position: 6547953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6544059-6544076:-1:exon

position:6544059:-1
position: 6544059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6544076:-1
position: 6544076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6543437-6543529:-1:exon

position:6543437:-1
position: 6543437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6543529:-1
position: 6543529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6542159-6542222:-1:exon

position:6542159:-1
position: 6542159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6542222:-1
position: 6542222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6540105-6540203:-1:exon

position:6540105:-1
position: 6540105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6540203:-1
position: 6540203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6538688-6538831:-1:exon

position:6538688:-1
position: 6538688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6538831:-1
position: 6538831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6538352-6538447:-1:exon

position:6538352:-1
position: 6538352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6538447:-1
position: 6538447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6536202-6536320:-1:exon

position:6536202:-1
position: 6536202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6536320:-1
position: 6536320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6535318-6535470:-1:exon

position:6535318:-1
position: 6535318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6535470:-1
position: 6535470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6532242-6532415:-1:exon

position:6532242:-1
position: 6532242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6532415:-1
position: 6532415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6531970-6532143:-1:exon

position:6531970:-1
position: 6531970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6532143:-1
position: 6532143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6531099-6531213:-1:exon

position:6531099:-1
position: 6531099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6531213:-1
position: 6531213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6530548-6530744:-1:exon

position:6530548:-1
position: 6530548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6530744:-1
position: 6530744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6530045-6530166:-1:exon

position:6530045:-1
position: 6530045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6530166:-1
position: 6530166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6529135-6529204:-1:exon

position:6529135:-1
position: 6529135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6529204:-1
position: 6529204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6528405-6528565:-1:exon

position:6528405:-1
position: 6528405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6528565:-1
position: 6528565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6528100-6528208:-1:exon

position:6528100:-1
position: 6528100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6528208:-1
position: 6528208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6525311-6525442:-1:exon

position:6525311:-1
position: 6525311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6525442:-1
position: 6525442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6524706-6524912:-1:exon

position:6524706:-1
position: 6524706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6524912:-1
position: 6524912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6522857-6522994:-1:exon

position:6522857:-1
position: 6522857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6522994:-1
position: 6522994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6522339-6522462:-1:exon

position:6522339:-1
position: 6522339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6522462:-1
position: 6522462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6522023-6522198:-1:exon

position:6522198:-1
position: 6522198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin-10-like
translation: MNPPKFAKVEDMAELTCLNEASVLHNLKDRYYSGLIYTYSGLFCVVINPYKNLPIYTEQIVEMYRGKKRHEVPPHIYAISETAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSHKGRKDHTTPSPSIIYGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQARDERTFHIFYQLLVGAGEHVKTDLLLEPLQNYKFLSNGYIPIAGQQDKDNFHETLEAMTIMGFSQDEITAMLRLVSAVLQFGNITFKKERNTDQASMPEDTAAQKLCHLLGLNVTEFTRAILSPRIKVGRDYVQKAQTKEQADFAIEALAKASYERLFRWLVHRINRALDRTKRQGASFIGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQVEYQREGFESAVIYFVLDVWSCVDLIERPANTPGILALLDEECWFPKATDKTFVEKLVQEQGDHPKFQKVRQLKDKADFCVIHYAGRVDYKADDWLMKNMDPLNDNVATLLHQSADRFVAELWKDVDRIVGLDQVSGMSDVTFVGSSYKTKKGMFRTVGQLYKESLSKLMATLRNTNPNFVRCIIPNHDKRAGKLEPHLVLDQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILTPNAIPKGFMDGKQACEQMIRALELDYNLYRIGQSKIFFRAGVLAHLEEERDLKITDIIILFQAAARGYLARKAFAKRQQQLSALKVLQRNCVAYLKLRHWQWWRLFTKVKPLLQVTRQDEEIQAKDEELLKVKEKQLKAEMDLTELGRKHQQLVEEKNILAEQLQAETELFAEAEEMRARLASKKQELEEILHDLESRVEEEEERNQQLQNEKRKMQRHIQDIEEQLEEEEATRQRLQLEKVTTEGKLKKMEEDIYILEDQNSKLMKERKLLEERVSEATSQLLEEEEKVKSLSKMRNKHEAVIADLEERLKKEEKGRQEIEKLKRKLDGESTDFQEQIAEMQQQIEELKAQLLKREEELQAALGR
SIO_010081: LOC109926555
subclass of: SO_0000673
so part of: LOC109926555
location: complement(join(6522023..6522198,6522339..6522462,6522857..6522994,6524706..6524912,6525311..6525442,6528100..6528208,6528405..6528565,6529135..6529204,6530045..6530166,6530548..6530744,6531099..6531213,6531970..6532143,6532242..6532415,6535318..6535470,6536202..6536320,6538352..6538447,6538688..6538831,6540105..6540203,6542159..6542222,6543437..6543529,6544059..6544076,6547851..6547953,6548214..6548241,6554411..6554567,6556937..6557047))
location: region:6522023-6557047:-1
so has part: feature:6556937-6557047:-1:exon
so has part: feature:6554411-6554567:-1:exon
so has part: feature:6548214-6548241:-1:exon
so has part: feature:6547851-6547953:-1:exon
so has part: feature:6544059-6544076:-1:exon
so has part: feature:6543437-6543529:-1:exon
so has part: feature:6542159-6542222:-1:exon
so has part: feature:6540105-6540203:-1:exon
so has part: feature:6538688-6538831:-1:exon
so has part: feature:6538352-6538447:-1:exon
so has part: feature:6536202-6536320:-1:exon
so has part: feature:6535318-6535470:-1:exon
so has part: feature:6532242-6532415:-1:exon
so has part: feature:6531970-6532143:-1:exon
so has part: feature:6531099-6531213:-1:exon
so has part: feature:6530548-6530744:-1:exon
so has part: feature:6530045-6530166:-1:exon
so has part: feature:6529135-6529204:-1:exon
so has part: feature:6528405-6528565:-1:exon
so has part: feature:6528100-6528208:-1:exon
so has part: feature:6525311-6525442:-1:exon
so has part: feature:6524706-6524912:-1:exon
so has part: feature:6522857-6522994:-1:exon
so has part: feature:6522339-6522462:-1:exon
so has part: feature:6522023-6522198:-1:exon

XP_048476248.1
type: Protein
SIO_000068: ncbiprotein

position:6557047:-1
position: 6557047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6556937-6557047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6554411-6554567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6548214-6548241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6547851-6547953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6544059-6544076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6543437-6543529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6542159-6542222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6540105-6540203:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6538688-6538831:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6538352-6538447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6536202-6536320:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6535318-6535470:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6532242-6532415:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6531970-6532143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6531099-6531213:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6530548-6530744:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6530045-6530166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6529135-6529204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6528405-6528565:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6528100-6528208:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6525311-6525442:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6524706-6524912:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6522857-6522994:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6522339-6522462:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6522023-6522198:-1:exon

LOC125487871
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6557816..6563253)
location: region:6557816-6563253:-1
so has part: feature:6557816-6563253:-1:exon
subclass of: SO_0000010

125487871
type: Gene
SIO_000068: ncbigene

position:6557816:-1
position: 6557816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6563253:-1
position: 6563253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6557816-6563253:-1:exon

LOC125487871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487871
product: gastrula zinc finger protein XlCGF17.1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620343.1
SIO_010081: LOC125487871
subclass of: SO_0000673
so part of: LOC125487871
location: complement(6557816..6563253)
location: region:6557816-6563253:-1
so has part: feature:6557816-6563253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6557816-6563253:-1:exon

LOC125487871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF17.1-like
translation: MATQEEEEEEGSGAEERLTAAPLPAEEEPTPGRGAGEWAWSSGHRWREQAPPTTTTTPTPCRKSYICSECGRSFDKYSNFKQHLRVHSGEKPFSCRVCGKDFNLLSNLRRHERTHTGERPFSCRVCAKAFSELSSLRRHERTHTGERPFPCPFCGKAFSRSCMLVIHQRTHTGERPFRCPRCDKRFSDPSSLRSHQRTHTGERPFRCPQCPKAFRYSSSLLQHQRAHAGERLHTCPLCGKGFTKSSTLAQHRSTHSRERPHKCPVCQRGFSRASVLGRHQRVHAWEGPRVCADCGASFSTSAGLHGHQCLPRGRGAQAPGEG
SIO_010081: LOC125487871
subclass of: SO_0000673
so part of: LOC125487871
location: complement(6562173..6563141)
location: region:6562173-6563141:-1
so has part: feature:6562173-6563141:-1:exon

XP_048476300.1
type: Protein
SIO_000068: ncbiprotein

position:6562173:-1
position: 6562173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6563141:-1
position: 6563141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6562173-6563141:-1:exon

LOC125487847
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6564076..6568167
location: region:6564076-6568167:1
so has part: feature:6564076-6568167:1:exon
subclass of: SO_0000010

125487847
type: Gene
SIO_000068: ncbigene

position:6564076:1
position: 6564076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6568167:1
position: 6568167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6564076-6568167:1:exon

LOC125487847
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487847
product: brain-specific angiogenesis inhibitor 1-associated protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620292.1
SIO_010081: LOC125487847
subclass of: SO_0000673
so part of: LOC125487847
location: join(6564076..6564095,6565003..6565174,6567663..6567703,6567853..6568167)
location: region:6564076-6568167:1
so has part: feature:6564076-6564095:1:exon
so has part: feature:6565003-6565174:1:exon
so has part: feature:6567663-6567703:1:exon
so has part: feature:6567853-6568167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6564076-6564095:1:exon

position:6564095:1
position: 6564095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6565003-6565174:1:exon

position:6565003:1
position: 6565003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6565174:1
position: 6565174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6567663-6567703:1:exon

position:6567663:1
position: 6567663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6567703:1
position: 6567703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6567853-6568167:1:exon

position:6567853:1
position: 6567853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487847
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain-specific angiogenesis inhibitor 1-associated protein 2-like
translation: MTVDLSILQNCWFNSSSTGKLDQVGLSAGFLGNAASIRNGNSSVSSGTNLRTRPFSLMDPDIPQLAEGFGDHQRRSSRENPFAKVQLRHTVTNDRSAPVVR
SIO_010081: LOC125487847
subclass of: SO_0000673
so part of: LOC125487847
location: join(6564076..6564095,6565003..6565174,6567663..6567703,6567853..6567925)
location: region:6564076-6567925:1
so has part: feature:6564076-6564095:1:exon
so has part: feature:6565003-6565174:1:exon
so has part: feature:6567663-6567703:1:exon
so has part: feature:6567853-6567925:1:exon

XP_048476249.1
type: Protein
SIO_000068: ncbiprotein

position:6567925:1
position: 6567925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6564076-6564095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6565003-6565174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6567663-6567703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6567853-6567925:1:exon

cers2a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cers2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6573192..6585862
location: region:6573192-6585862:1
so has part: feature:6573192-6585862:1:exon
subclass of: SO_0000010

125487848
type: Gene
SIO_000068: ncbigene

position:6573192:1
position: 6573192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6585862:1
position: 6585862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6573192-6585862:1:exon

cers2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cers2a
product: ceramide synthase 2a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048620293.1
SIO_010081: cers2a
subclass of: SO_0000673
so part of: cers2a
location: join(6573192..6573364,6574505..6574622,6575979..6576097,6577311..6577368,6579954..6580004,6580509..6580601,6582696..6582840,6583732..6583892,6585390..6585862)
location: region:6573192-6585862:1
so has part: feature:6573192-6573364:1:exon
so has part: feature:6574505-6574622:1:exon
so has part: feature:6575979-6576097:1:exon
so has part: feature:6577311-6577368:1:exon
so has part: feature:6579954-6580004:1:exon
so has part: feature:6580509-6580601:1:exon
so has part: feature:6582696-6582840:1:exon
so has part: feature:6583732-6583892:1:exon
so has part: feature:6585390-6585862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6573192-6573364:1:exon

position:6573364:1
position: 6573364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6574505-6574622:1:exon

position:6574505:1
position: 6574505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6574622:1
position: 6574622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6575979-6576097:1:exon

position:6575979:1
position: 6575979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6576097:1
position: 6576097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6577311-6577368:1:exon

position:6577311:1
position: 6577311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6577368:1
position: 6577368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6579954-6580004:1:exon

position:6579954:1
position: 6579954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6580004:1
position: 6580004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6580509-6580601:1:exon

position:6580509:1
position: 6580509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6580601:1
position: 6580601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6582696-6582840:1:exon

position:6582696:1
position: 6582696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6582840:1
position: 6582840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6583732-6583892:1:exon

position:6583732:1
position: 6583732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6583892:1
position: 6583892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6585390-6585862:1:exon

position:6585390:1
position: 6585390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cers2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cers2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 2a
translation: MFQTIYDWFWWDRLWLPYNLTWTDLEDRDGRIYAKASDLYVTIPCAFAFMIIRYLFERSVATYFARVLGIKEKVRLRVKPNPILEKSFRASSKHPRQSDIEGLSKKCGLSPRQVERWFRRRRNLERPSVLKKFREACWRFTFYVLAFTAGLAVIVDKPWFYDLRETWKGFPIQTMLPSQYWYYMIELGFYWSLLFSVAFDVKRKDFREQIIHHVATIILISFSWCTNYVRAGTLVMAVHDASDYFLEVTAGGVCRIIHCTVIYPLELYPAFFGYYFFNAILVVLQLLHIFWAALILRMTLKFMTGNQIVEDERSDRDETDNSEDEDDEEPVKNGLISNGHSTLNNNHTKSE
SIO_010081: cers2a
subclass of: SO_0000673
so part of: cers2a
location: join(6573192..6573364,6574505..6574622,6575979..6576097,6577311..6577368,6579954..6580004,6580509..6580601,6582696..6582840,6583732..6583892,6585390..6585527)
location: region:6573192-6585527:1
so has part: feature:6573192-6573364:1:exon
so has part: feature:6574505-6574622:1:exon
so has part: feature:6575979-6576097:1:exon
so has part: feature:6577311-6577368:1:exon
so has part: feature:6579954-6580004:1:exon
so has part: feature:6580509-6580601:1:exon
so has part: feature:6582696-6582840:1:exon
so has part: feature:6583732-6583892:1:exon
so has part: feature:6585390-6585527:1:exon

XP_048476250.1
type: Protein
SIO_000068: ncbiprotein

position:6585527:1
position: 6585527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6573192-6573364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6574505-6574622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6575979-6576097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6577311-6577368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6579954-6580004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6580509-6580601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6582696-6582840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6583732-6583892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6585390-6585527:1:exon

LOC109925832
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6592636..6625025)
location: region:6592636-6625025:-1
so has part: feature:6592636-6625025:-1:exon
subclass of: SO_0000010

109925832
type: Gene
SIO_000068: ncbigene

position:6592636:-1
position: 6592636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6625025:-1
position: 6625025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6592636-6625025:-1:exon

LOC109925832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925832
product: histone-lysine N-methyltransferase SETDB1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_048620344.1
SIO_010081: LOC109925832
subclass of: SO_0000673
so part of: LOC109925832
location: complement(join(6592636..6592728,6593866..6594071,6594841..6595042,6598613..6598748,6599226..6599260,6600232..6600908,6605007..6605176,6606608..6606724,6608216..6608836,6609675..6609845,6610714..6610861,6611847..6611973,6613893..6614083,6615982..6616055,6621189..6621390,6624843..6625025))
location: region:6592636-6625025:-1
so has part: feature:6624843-6625025:-1:exon
so has part: feature:6621189-6621390:-1:exon
so has part: feature:6615982-6616055:-1:exon
so has part: feature:6613893-6614083:-1:exon
so has part: feature:6611847-6611973:-1:exon
so has part: feature:6610714-6610861:-1:exon
so has part: feature:6609675-6609845:-1:exon
so has part: feature:6608216-6608836:-1:exon
so has part: feature:6606608-6606724:-1:exon
so has part: feature:6605007-6605176:-1:exon
so has part: feature:6600232-6600908:-1:exon
so has part: feature:6599226-6599260:-1:exon
so has part: feature:6598613-6598748:-1:exon
so has part: feature:6594841-6595042:-1:exon
so has part: feature:6593866-6594071:-1:exon
so has part: feature:6592636-6592728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6624843-6625025:-1:exon

position:6624843:-1
position: 6624843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6621189-6621390:-1:exon

position:6621189:-1
position: 6621189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6621390:-1
position: 6621390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6615982-6616055:-1:exon

position:6615982:-1
position: 6615982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6616055:-1
position: 6616055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6613893-6614083:-1:exon

position:6613893:-1
position: 6613893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6614083:-1
position: 6614083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6611847-6611973:-1:exon

position:6611847:-1
position: 6611847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6611973:-1
position: 6611973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6610714-6610861:-1:exon

position:6610714:-1
position: 6610714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6610861:-1
position: 6610861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6609675-6609845:-1:exon

position:6609675:-1
position: 6609675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6609845:-1
position: 6609845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6608216-6608836:-1:exon

position:6608216:-1
position: 6608216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6608836:-1
position: 6608836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6606608-6606724:-1:exon

position:6606608:-1
position: 6606608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6606724:-1
position: 6606724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6605007-6605176:-1:exon

position:6605007:-1
position: 6605007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6605176:-1
position: 6605176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6600232-6600908:-1:exon

position:6600232:-1
position: 6600232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6600908:-1
position: 6600908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6599226-6599260:-1:exon

position:6599226:-1
position: 6599226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6599260:-1
position: 6599260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6598613-6598748:-1:exon

position:6598613:-1
position: 6598613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6598748:-1
position: 6598748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6594841-6595042:-1:exon

position:6594841:-1
position: 6594841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6595042:-1
position: 6595042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6593866-6594071:-1:exon

position:6593866:-1
position: 6593866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6594071:-1
position: 6594071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6592636-6592728:-1:exon

position:6592728:-1
position: 6592728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109925832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1-like
translation: MRILGKKRTKTWHKGMLIAIVTTGSANKYKVKFDNKGKSLLSGNHIAYDYHPAADRLMVGSRVVAKYKDGNSVWLYAGIVAETPNNKNKTRFLIFFDDGYASYVNLSELYPICRPLAKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQQIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFNLKMTTAFRQGGQSGQQRTRPNVGAVRTKGPVVQYTQDLTANTTHSPQLSRPSNQQQSLPPSHRPQSPGDKTDPGSLALSRKQVAKKSTAFRPSALPGRATDSAAPAPETPAAGDAPSAGKPAPGSQQYRVGAVPSGALESGAGPPQLPYELLDEPMPVEAPYKAPSEKLFYVAHVCQPSCLARPQAASRGQYRGRNPMLVPLLYDFRRMTARRKINRKMSFHVVYKGPCGLSLRNMAEVEQYLSATCADFLYLEMFCFDPYVLVDRKFQPQKPFYYIRDITHGKEDVPLSCVNEIDSTPPPHVAYSKERIPGEGVYINTHADFLVGCDCTDGCKDRSKCACLQLTMQATACSPGGQINYNAGYQSKRLDECLPTGIYECNKRCKCNVGMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVEKYKEGYESDAKCSSDSSGVDLKEEHDHSGTDAEDSSSDSSDQNFGGNDDAYVPSSVWRSYVTRTKSREQKENGSETGLTRQEEPGPPPASAAPTAPPPTPAPCKLPVTEETAKNKVASWLSAMRVADSPVDPEAGGEAKPLKDEAVKGEGTAPKPDEEDEEEEEEGGPKPADADSKPWGKQEEKKDAKAEVADLKNPEAPPHLKISSPFDNASRNFGYNPRPARTEGIRRPVSKTTLLQARRNSTPAPSAKDEVMTLSSSSDTEMETGTQTSGSRKPTQGQAPAAAVAANDSDDVQTISSGSDEAYSADKKDESDPKDTDSINKRQVAVKSTRGFALKSTHGIAVKASNMEKGEGGSGHRSTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASK
SIO_010081: LOC109925832
subclass of: SO_0000673
so part of: LOC109925832
location: complement(join(6592636..6592728,6593866..6594071,6594841..6595042,6598613..6598748,6599226..6599260,6600232..6600908,6605007..6605176,6606608..6606724,6608216..6608836,6609675..6609845,6610714..6610861,6611847..6611973,6613893..6614083,6615982..6616055,6621189..6621390,6624843..6624912))
location: region:6592636-6624912:-1
so has part: feature:6624843-6624912:-1:exon
so has part: feature:6621189-6621390:-1:exon
so has part: feature:6615982-6616055:-1:exon
so has part: feature:6613893-6614083:-1:exon
so has part: feature:6611847-6611973:-1:exon
so has part: feature:6610714-6610861:-1:exon
so has part: feature:6609675-6609845:-1:exon
so has part: feature:6608216-6608836:-1:exon
so has part: feature:6606608-6606724:-1:exon
so has part: feature:6605007-6605176:-1:exon
so has part: feature:6600232-6600908:-1:exon
so has part: feature:6599226-6599260:-1:exon
so has part: feature:6598613-6598748:-1:exon
so has part: feature:6594841-6595042:-1:exon
so has part: feature:6593866-6594071:-1:exon
so has part: feature:6592636-6592728:-1:exon

XP_048476301.1
type: Protein
SIO_000068: ncbiprotein

position:6624912:-1
position: 6624912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6624843-6624912:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6621189-6621390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6615982-6616055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6613893-6614083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6611847-6611973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6610714-6610861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6609675-6609845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6608216-6608836:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6606608-6606724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6605007-6605176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6600232-6600908:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6599226-6599260:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6598613-6598748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6594841-6595042:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6593866-6594071:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6592636-6592728:-1:exon

LOC109938798
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109938798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6639349..6646525
location: region:6639349-6646525:1
so has part: feature:6639349-6646525:1:exon
subclass of: SO_0000010

109938798
type: Gene
SIO_000068: ncbigene

position:6639349:1
position: 6639349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6646525:1
position: 6646525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6639349-6646525:1:exon

LOC109938798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109938798
product: histone-lysine N-methyltransferase SETDB1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_048620347.1
SIO_010081: LOC109938798
subclass of: SO_0000673
so part of: LOC109938798
location: join(6639349..6639462,6641209..6641418,6641927..6642102,6645217..6645299,6646256..6646525)
location: region:6639349-6646525:1
so has part: feature:6639349-6639462:1:exon
so has part: feature:6641209-6641418:1:exon
so has part: feature:6641927-6642102:1:exon
so has part: feature:6645217-6645299:1:exon
so has part: feature:6646256-6646525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6639349-6639462:1:exon

position:6639462:1
position: 6639462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6641209-6641418:1:exon

position:6641209:1
position: 6641209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6641418:1
position: 6641418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6641927-6642102:1:exon

position:6641927:1
position: 6641927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6642102:1
position: 6642102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6645217-6645299:1:exon

position:6645217:1
position: 6645217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6645299:1
position: 6645299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6646256-6646525:1:exon

position:6646256:1
position: 6646256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109938798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109938798
product: histone-lysine N-methyltransferase SETDB1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_048620348.1
SIO_010081: LOC109938798
subclass of: SO_0000673
so part of: LOC109938798
location: join(6639355..6639462,6641214..6641418,6641927..6642102,6645217..6645299,6646256..6646525)
location: region:6639355-6646525:1
so has part: feature:6639355-6639462:1:exon
so has part: feature:6641214-6641418:1:exon
so has part: feature:6641927-6642102:1:exon
so has part: feature:6645217-6645299:1:exon
so has part: feature:6646256-6646525:1:exon

position:6639355:1
position: 6639355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6639355-6639462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6641214-6641418:1:exon

position:6641214:1
position: 6641214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6641927-6642102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6645217-6645299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6646256-6646525:1:exon

LOC109938798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109938798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1-like
translation: MTSAETMDLAVEELGLSMDEIREWIDQELEKVDFLKQRRAALQELESWVEKKEAEVAHVDGLFEDASRSVDMCESMVKDLYNNLGLQYEETAAEGSNEKDGAKLSEVIEILDDDEEDDDDVMAVEPAETGRAAPPASTTSTVTALGKITREPSLLRDAMAAMRKSARDVQKFVEAVSRKPPPASVGLLRAANTGAGRFTVTPTQPSSSSCLRKLRHGLGTASVVCQVSLVVT
SIO_010081: LOC109938798
subclass of: SO_0000673
so part of: LOC109938798
location: join(6641216..6641418,6641927..6642102,6645217..6645299,6646256..6646492)
location: region:6641216-6646492:1
so has part: feature:6641216-6641418:1:exon
so has part: feature:6641927-6642102:1:exon
so has part: feature:6645217-6645299:1:exon
so has part: feature:6646256-6646492:1:exon

XP_048476304.1
type: Protein
SIO_000068: ncbiprotein

position:6641216:1
position: 6641216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6646492:1
position: 6646492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6641216-6641418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6641927-6642102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6645217-6645299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6646256-6646492:1:exon

LOC109938798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109938798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1-like
translation: MTSAETMDLAVEELGLSMDEIREWIDQELEKVDFLKQRRAALQELESWVEKKEAEVAHVDGLFEDASRSVDMCESMVKDLYNNLGLQYEETAAEGSNEKDGAKLSEVIEILDDDEEDDDDVMAVEPAETGRAAPPASTTSTVTALGKITREPSLLRDAMAAMRKSARDVQKFVEAVSRKPPPASVGLLRAANTGAGRFTVTPTQPSSSSCLRKLRHGLGTASVVCQVSLVVT
SIO_010081: LOC109938798
subclass of: SO_0000673
so part of: LOC109938798
location: join(6641216..6641418,6641927..6642102,6645217..6645299,6646256..6646492)
location: region:6641216-6646492:1
so has part: feature:6641216-6641418:1:exon
so has part: feature:6641927-6642102:1:exon
so has part: feature:6645217-6645299:1:exon
so has part: feature:6646256-6646492:1:exon

XP_048476305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6641216-6641418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6641927-6642102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6645217-6645299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6646256-6646492:1:exon

LOC109923568
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6658738..6699750)
location: region:6658738-6699750:-1
so has part: feature:6658738-6699750:-1:exon
subclass of: SO_0000010

109923568
type: Gene
SIO_000068: ncbigene

position:6658738:-1
position: 6658738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6699750:-1
position: 6699750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6658738-6699750:-1:exon

LOC109923568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923568
product: aryl hydrocarbon receptor nuclear translocator-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620351.1
SIO_010081: LOC109923568
subclass of: SO_0000673
so part of: LOC109923568
location: complement(join(6658738..6664225,6665579..6665718,6666333..6666498,6668974..6669115,6670134..6670236,6671018..6671123,6671817..6671877,6673860..6674011,6675398..6675472,6676592..6676726,6679865..6679938,6680098..6680183,6681678..6681743,6685157..6685259,6686096..6686309,6688661..6688875,6689446..6689489,6689940..6689990,6691078..6691195,6699480..6699750))
location: region:6658738-6699750:-1
so has part: feature:6699480-6699750:-1:exon
so has part: feature:6691078-6691195:-1:exon
so has part: feature:6689940-6689990:-1:exon
so has part: feature:6689446-6689489:-1:exon
so has part: feature:6688661-6688875:-1:exon
so has part: feature:6686096-6686309:-1:exon
so has part: feature:6685157-6685259:-1:exon
so has part: feature:6681678-6681743:-1:exon
so has part: feature:6680098-6680183:-1:exon
so has part: feature:6679865-6679938:-1:exon
so has part: feature:6676592-6676726:-1:exon
so has part: feature:6675398-6675472:-1:exon
so has part: feature:6673860-6674011:-1:exon
so has part: feature:6671817-6671877:-1:exon
so has part: feature:6671018-6671123:-1:exon
so has part: feature:6670134-6670236:-1:exon
so has part: feature:6668974-6669115:-1:exon
so has part: feature:6666333-6666498:-1:exon
so has part: feature:6665579-6665718:-1:exon
so has part: feature:6658738-6664225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6699480-6699750:-1:exon

position:6699480:-1
position: 6699480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6691078-6691195:-1:exon

position:6691078:-1
position: 6691078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6691195:-1
position: 6691195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6689940-6689990:-1:exon

position:6689940:-1
position: 6689940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6689990:-1
position: 6689990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6689446-6689489:-1:exon

position:6689446:-1
position: 6689446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6689489:-1
position: 6689489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6688661-6688875:-1:exon

position:6688661:-1
position: 6688661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6688875:-1
position: 6688875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6686096-6686309:-1:exon

position:6686096:-1
position: 6686096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6686309:-1
position: 6686309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6685157-6685259:-1:exon

position:6685157:-1
position: 6685157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6685259:-1
position: 6685259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6681678-6681743:-1:exon

position:6681678:-1
position: 6681678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6681743:-1
position: 6681743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6680098-6680183:-1:exon

position:6680098:-1
position: 6680098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6680183:-1
position: 6680183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6679865-6679938:-1:exon

position:6679865:-1
position: 6679865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6679938:-1
position: 6679938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6676592-6676726:-1:exon

position:6676592:-1
position: 6676592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6676726:-1
position: 6676726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6675398-6675472:-1:exon

position:6675398:-1
position: 6675398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6675472:-1
position: 6675472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6673860-6674011:-1:exon

position:6673860:-1
position: 6673860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6674011:-1
position: 6674011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6671817-6671877:-1:exon

position:6671817:-1
position: 6671817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6671877:-1
position: 6671877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6671018-6671123:-1:exon

position:6671018:-1
position: 6671018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6671123:-1
position: 6671123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6670134-6670236:-1:exon

position:6670134:-1
position: 6670134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6670236:-1
position: 6670236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6668974-6669115:-1:exon

position:6668974:-1
position: 6668974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6669115:-1
position: 6669115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6666333-6666498:-1:exon

position:6666333:-1
position: 6666333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6666498:-1
position: 6666498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6665579-6665718:-1:exon

position:6665579:-1
position: 6665579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6665718:-1
position: 6665718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6658738-6664225:-1:exon

position:6664225:-1
position: 6664225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109923568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923568
product: aryl hydrocarbon receptor nuclear translocator-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620350.1
SIO_010081: LOC109923568
subclass of: SO_0000673
so part of: LOC109923568
location: complement(join(6658738..6664225,6665579..6665718,6666333..6666498,6668974..6669115,6670134..6670236,6671018..6671123,6671817..6671877,6673860..6674011,6675398..6675472,6676592..6676726,6679865..6679938,6680098..6680183,6681678..6681743,6685157..6685259,6686096..6686309,6688661..6688875,6689446..6689489,6689940..6689990,6691078..6691195,6695639..6695954,6699480..6699750))
location: region:6658738-6699750:-1
so has part: feature:6699480-6699750:-1:exon
so has part: feature:6695639-6695954:-1:exon
so has part: feature:6691078-6691195:-1:exon
so has part: feature:6689940-6689990:-1:exon
so has part: feature:6689446-6689489:-1:exon
so has part: feature:6688661-6688875:-1:exon
so has part: feature:6686096-6686309:-1:exon
so has part: feature:6685157-6685259:-1:exon
so has part: feature:6681678-6681743:-1:exon
so has part: feature:6680098-6680183:-1:exon
so has part: feature:6679865-6679938:-1:exon
so has part: feature:6676592-6676726:-1:exon
so has part: feature:6675398-6675472:-1:exon
so has part: feature:6673860-6674011:-1:exon
so has part: feature:6671817-6671877:-1:exon
so has part: feature:6671018-6671123:-1:exon
so has part: feature:6670134-6670236:-1:exon
so has part: feature:6668974-6669115:-1:exon
so has part: feature:6666333-6666498:-1:exon
so has part: feature:6665579-6665718:-1:exon
so has part: feature:6658738-6664225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6699480-6699750:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6695639-6695954:-1:exon

position:6695639:-1
position: 6695639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6695954:-1
position: 6695954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6691078-6691195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6689940-6689990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6689446-6689489:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6688661-6688875:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6686096-6686309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6685157-6685259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6681678-6681743:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6680098-6680183:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6679865-6679938:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6676592-6676726:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6675398-6675472:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6673860-6674011:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6671817-6671877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6671018-6671123:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6670134-6670236:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6668974-6669115:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6666333-6666498:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6665579-6665718:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6658738-6664225:-1:exon

LOC109923568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923568
product: aryl hydrocarbon receptor nuclear translocator-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620349.1
SIO_010081: LOC109923568
subclass of: SO_0000673
so part of: LOC109923568
location: complement(join(6658738..6664225,6665579..6665718,6666333..6666498,6668974..6669115,6670134..6670236,6671018..6671123,6671817..6671877,6673860..6674011,6675398..6675472,6676592..6676726,6679865..6679938,6680098..6680183,6681678..6681743,6685157..6685259,6686096..6686309,6688661..6688875,6689446..6689489,6689940..6689990,6691078..6691195,6694780..6695632))
location: region:6658738-6695632:-1
so has part: feature:6694780-6695632:-1:exon
so has part: feature:6691078-6691195:-1:exon
so has part: feature:6689940-6689990:-1:exon
so has part: feature:6689446-6689489:-1:exon
so has part: feature:6688661-6688875:-1:exon
so has part: feature:6686096-6686309:-1:exon
so has part: feature:6685157-6685259:-1:exon
so has part: feature:6681678-6681743:-1:exon
so has part: feature:6680098-6680183:-1:exon
so has part: feature:6679865-6679938:-1:exon
so has part: feature:6676592-6676726:-1:exon
so has part: feature:6675398-6675472:-1:exon
so has part: feature:6673860-6674011:-1:exon
so has part: feature:6671817-6671877:-1:exon
so has part: feature:6671018-6671123:-1:exon
so has part: feature:6670134-6670236:-1:exon
so has part: feature:6668974-6669115:-1:exon
so has part: feature:6666333-6666498:-1:exon
so has part: feature:6665579-6665718:-1:exon
so has part: feature:6658738-6664225:-1:exon

position:6695632:-1
position: 6695632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6694780-6695632:-1:exon

position:6694780:-1
position: 6694780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6691078-6691195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6689940-6689990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6689446-6689489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6688661-6688875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6686096-6686309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6685157-6685259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6681678-6681743:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6680098-6680183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6679865-6679938:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6676592-6676726:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6675398-6675472:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6673860-6674011:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6671817-6671877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6671018-6671123:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6670134-6670236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6668974-6669115:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6666333-6666498:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6665579-6665718:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6658738-6664225:-1:exon

LOC109923568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator-like isoform X1
translation: MSSFVTLLLLAWKSLLFGKDGERPIKIKKILEMASDIGGQLGVPVTGRAGAGTQPQSSGGIVSRAPKRHPGLDFDDDDDGEGSSKFPRCDEEQGPNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSADGTYKPSFLTDQELKHLILEAADGFLFVVACETGKIIYVSDSVTPVLNQPQTEWFGSTLYDQVHPDDVDKLREQLSTSENAMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRVRCGNATEDPASISRLSFLRNRYRNGLGPVKEGETQYVVVHCTGYIKAWPPAGVTLPDDEPDGQGNKFCLVAIGRLQVTSSPNCLDMKSNSVPIEFLSRHNPNGVFTFVDCRCLGTIGYQSQELLGKDIVDFAHPEDKGLLRDSFQQVVSLKGQVLSVMFRFQTKSREWAVIRTSSFSFQNPYSDDIEYIVCTNTNVKHLQQLPAITGQEDLAYDHSQVAAASEHTKPISKAEPLYSQETEPRYTEIYSALPTADQSKVIPSTPGTGTQQIFQQGTSFPSTRPAQNFSSAMVPPVNIVQQPASAGQILAQISRQSANGQVTGNAWSGSRPPFPAQMAAQGAKTQSPQFGMAASRSFTANTASFSPLASPVATSTAGGTAYPSLVNRTSAFAEAGQTGSQFQSRPADGGSVWPQWQGQHHSQASSEQHTQQSQPEVFPDMLSIYEEQGTSYNSDEFSELPIFPSFSE
SIO_010081: LOC109923568
subclass of: SO_0000673
so part of: LOC109923568
location: complement(join(6664136..6664225,6665579..6665718,6666333..6666498,6668974..6669115,6670134..6670236,6671018..6671123,6671817..6671877,6673860..6674011,6675398..6675472,6676592..6676726,6679865..6679938,6680098..6680183,6681678..6681743,6685157..6685259,6686096..6686309,6688661..6688875,6689446..6689489,6689940..6689990,6691078..6691195,6694780..6694873))
location: region:6664136-6694873:-1
so has part: feature:6694780-6694873:-1:exon
so has part: feature:6691078-6691195:-1:exon
so has part: feature:6689940-6689990:-1:exon
so has part: feature:6689446-6689489:-1:exon
so has part: feature:6688661-6688875:-1:exon
so has part: feature:6686096-6686309:-1:exon
so has part: feature:6685157-6685259:-1:exon
so has part: feature:6681678-6681743:-1:exon
so has part: feature:6680098-6680183:-1:exon
so has part: feature:6679865-6679938:-1:exon
so has part: feature:6676592-6676726:-1:exon
so has part: feature:6675398-6675472:-1:exon
so has part: feature:6673860-6674011:-1:exon
so has part: feature:6671817-6671877:-1:exon
so has part: feature:6671018-6671123:-1:exon
so has part: feature:6670134-6670236:-1:exon
so has part: feature:6668974-6669115:-1:exon
so has part: feature:6666333-6666498:-1:exon
so has part: feature:6665579-6665718:-1:exon
so has part: feature:6664136-6664225:-1:exon

XP_048476306.1
type: Protein
SIO_000068: ncbiprotein

position:6664136:-1
position: 6664136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6694873:-1
position: 6694873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6694780-6694873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6691078-6691195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6689940-6689990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6689446-6689489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6688661-6688875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6686096-6686309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6685157-6685259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6681678-6681743:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6680098-6680183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6679865-6679938:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6676592-6676726:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6675398-6675472:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6673860-6674011:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6671817-6671877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6671018-6671123:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6670134-6670236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6668974-6669115:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6666333-6666498:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6665579-6665718:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6664136-6664225:-1:exon

LOC109923568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator-like isoform X2
translation: MASDIGGQLGVPVTGRAGAGTQPQSSGGIVSRAPKRHPGLDFDDDDDGEGSSKFPRCDEEQGPNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSADGTYKPSFLTDQELKHLILEAADGFLFVVACETGKIIYVSDSVTPVLNQPQTEWFGSTLYDQVHPDDVDKLREQLSTSENAMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRVRCGNATEDPASISRLSFLRNRYRNGLGPVKEGETQYVVVHCTGYIKAWPPAGVTLPDDEPDGQGNKFCLVAIGRLQVTSSPNCLDMKSNSVPIEFLSRHNPNGVFTFVDCRCLGTIGYQSQELLGKDIVDFAHPEDKGLLRDSFQQVVSLKGQVLSVMFRFQTKSREWAVIRTSSFSFQNPYSDDIEYIVCTNTNVKHLQQLPAITGQEDLAYDHSQVAAASEHTKPISKAEPLYSQETEPRYTEIYSALPTADQSKVIPSTPGTGTQQIFQQGTSFPSTRPAQNFSSAMVPPVNIVQQPASAGQILAQISRQSANGQVTGNAWSGSRPPFPAQMAAQGAKTQSPQFGMAASRSFTANTASFSPLASPVATSTAGGTAYPSLVNRTSAFAEAGQTGSQFQSRPADGGSVWPQWQGQHHSQASSEQHTQQSQPEVFPDMLSIYEEQGTSYNSDEFSELPIFPSFSE
SIO_010081: LOC109923568
subclass of: SO_0000673
so part of: LOC109923568
location: complement(join(6664136..6664225,6665579..6665718,6666333..6666498,6668974..6669115,6670134..6670236,6671018..6671123,6671817..6671877,6673860..6674011,6675398..6675472,6676592..6676726,6679865..6679938,6680098..6680183,6681678..6681743,6685157..6685259,6686096..6686309,6688661..6688875,6689446..6689489,6689940..6689990,6691078..6691193))
location: region:6664136-6691193:-1
so has part: feature:6691078-6691193:-1:exon
so has part: feature:6689940-6689990:-1:exon
so has part: feature:6689446-6689489:-1:exon
so has part: feature:6688661-6688875:-1:exon
so has part: feature:6686096-6686309:-1:exon
so has part: feature:6685157-6685259:-1:exon
so has part: feature:6681678-6681743:-1:exon
so has part: feature:6680098-6680183:-1:exon
so has part: feature:6679865-6679938:-1:exon
so has part: feature:6676592-6676726:-1:exon
so has part: feature:6675398-6675472:-1:exon
so has part: feature:6673860-6674011:-1:exon
so has part: feature:6671817-6671877:-1:exon
so has part: feature:6671018-6671123:-1:exon
so has part: feature:6670134-6670236:-1:exon
so has part: feature:6668974-6669115:-1:exon
so has part: feature:6666333-6666498:-1:exon
so has part: feature:6665579-6665718:-1:exon
so has part: feature:6664136-6664225:-1:exon

XP_048476307.1
type: Protein
SIO_000068: ncbiprotein

position:6691193:-1
position: 6691193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6691078-6691193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6689940-6689990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6689446-6689489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6688661-6688875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6686096-6686309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6685157-6685259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6681678-6681743:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6680098-6680183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6679865-6679938:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6676592-6676726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6675398-6675472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6673860-6674011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6671817-6671877:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6671018-6671123:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6670134-6670236:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6668974-6669115:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6666333-6666498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6665579-6665718:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6664136-6664225:-1:exon

LOC109923568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator-like isoform X2
translation: MASDIGGQLGVPVTGRAGAGTQPQSSGGIVSRAPKRHPGLDFDDDDDGEGSSKFPRCDEEQGPNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSADGTYKPSFLTDQELKHLILEAADGFLFVVACETGKIIYVSDSVTPVLNQPQTEWFGSTLYDQVHPDDVDKLREQLSTSENAMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRVRCGNATEDPASISRLSFLRNRYRNGLGPVKEGETQYVVVHCTGYIKAWPPAGVTLPDDEPDGQGNKFCLVAIGRLQVTSSPNCLDMKSNSVPIEFLSRHNPNGVFTFVDCRCLGTIGYQSQELLGKDIVDFAHPEDKGLLRDSFQQVVSLKGQVLSVMFRFQTKSREWAVIRTSSFSFQNPYSDDIEYIVCTNTNVKHLQQLPAITGQEDLAYDHSQVAAASEHTKPISKAEPLYSQETEPRYTEIYSALPTADQSKVIPSTPGTGTQQIFQQGTSFPSTRPAQNFSSAMVPPVNIVQQPASAGQILAQISRQSANGQVTGNAWSGSRPPFPAQMAAQGAKTQSPQFGMAASRSFTANTASFSPLASPVATSTAGGTAYPSLVNRTSAFAEAGQTGSQFQSRPADGGSVWPQWQGQHHSQASSEQHTQQSQPEVFPDMLSIYEEQGTSYNSDEFSELPIFPSFSE
SIO_010081: LOC109923568
subclass of: SO_0000673
so part of: LOC109923568
location: complement(join(6664136..6664225,6665579..6665718,6666333..6666498,6668974..6669115,6670134..6670236,6671018..6671123,6671817..6671877,6673860..6674011,6675398..6675472,6676592..6676726,6679865..6679938,6680098..6680183,6681678..6681743,6685157..6685259,6686096..6686309,6688661..6688875,6689446..6689489,6689940..6689990,6691078..6691193))
location: region:6664136-6691193:-1
so has part: feature:6691078-6691193:-1:exon
so has part: feature:6689940-6689990:-1:exon
so has part: feature:6689446-6689489:-1:exon
so has part: feature:6688661-6688875:-1:exon
so has part: feature:6686096-6686309:-1:exon
so has part: feature:6685157-6685259:-1:exon
so has part: feature:6681678-6681743:-1:exon
so has part: feature:6680098-6680183:-1:exon
so has part: feature:6679865-6679938:-1:exon
so has part: feature:6676592-6676726:-1:exon
so has part: feature:6675398-6675472:-1:exon
so has part: feature:6673860-6674011:-1:exon
so has part: feature:6671817-6671877:-1:exon
so has part: feature:6671018-6671123:-1:exon
so has part: feature:6670134-6670236:-1:exon
so has part: feature:6668974-6669115:-1:exon
so has part: feature:6666333-6666498:-1:exon
so has part: feature:6665579-6665718:-1:exon
so has part: feature:6664136-6664225:-1:exon

XP_048476308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6691078-6691193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6689940-6689990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6689446-6689489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6688661-6688875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6686096-6686309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6685157-6685259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6681678-6681743:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6680098-6680183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6679865-6679938:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6676592-6676726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6675398-6675472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6673860-6674011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6671817-6671877:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6671018-6671123:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6670134-6670236:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6668974-6669115:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6666333-6666498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6665579-6665718:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6664136-6664225:-1:exon

LOC109925461
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6706725..6725232
location: region:6706725-6725232:1
so has part: feature:6706725-6725232:1:exon
subclass of: SO_0000010

109925461
type: Gene
SIO_000068: ncbigene

position:6706725:1
position: 6706725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6725232:1
position: 6725232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6706725-6725232:1:exon

LOC109925461
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925461
product: alpha-endosulfine, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_020525400.2
SIO_010081: LOC109925461
subclass of: SO_0000673
so part of: LOC109925461
location: join(6706725..6707026,6721984..6722109,6724325..6725232)
location: region:6706725-6725232:1
so has part: feature:6706725-6707026:1:exon
so has part: feature:6721984-6722109:1:exon
so has part: feature:6724325-6725232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6706725-6707026:1:exon

position:6707026:1
position: 6707026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6721984-6722109:1:exon

position:6721984:1
position: 6721984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6722109:1
position: 6722109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6724325-6725232:1:exon

position:6724325:1
position: 6724325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925461
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925461
product: alpha-endosulfine, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 long SRA reads, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_020525399.2
SIO_010081: LOC109925461
subclass of: SO_0000673
so part of: LOC109925461
location: join(6706731..6707026,6721984..6722109,6724322..6725232)
location: region:6706731-6725232:1
so has part: feature:6706731-6707026:1:exon
so has part: feature:6721984-6722109:1:exon
so has part: feature:6724322-6725232:1:exon

position:6706731:1
position: 6706731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6706731-6707026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6721984-6722109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6724322-6725232:1:exon

position:6724322:1
position: 6724322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925461
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine isoform X1
translation: MSENREPETQAEETGEEKQDTQEKGAMSPEKAEEIKLKAKYPVLGLRPGGSEFLMKRLQKGQKYFDSGDYNMAKAKMKNKQPPNSGADKNLVTGDHIPTPEDLPQRKSSLVTSKLAG
SIO_010081: LOC109925461
subclass of: SO_0000673
so part of: LOC109925461
location: join(6706970..6707026,6721984..6722109,6724322..6724492)
location: region:6706970-6724492:1
so has part: feature:6706970-6707026:1:exon
so has part: feature:6721984-6722109:1:exon
so has part: feature:6724322-6724492:1:exon

XP_020380988.2
type: Protein
SIO_000068: ncbiprotein

position:6706970:1
position: 6706970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6724492:1
position: 6724492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6706970-6707026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6721984-6722109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6724322-6724492:1:exon

LOC109925461
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine isoform X2
translation: MSENREPETQAEETGEEKQDTQEKGAMSPEKAEEIKLKAKYPVLGLRPGGSEFLMKRLQKGKYFDSGDYNMAKAKMKNKQPPNSGADKNLVTGDHIPTPEDLPQRKSSLVTSKLAG
SIO_010081: LOC109925461
subclass of: SO_0000673
so part of: LOC109925461
location: join(6706970..6707026,6721984..6722109,6724325..6724492)
location: region:6706970-6724492:1
so has part: feature:6706970-6707026:1:exon
so has part: feature:6721984-6722109:1:exon
so has part: feature:6724325-6724492:1:exon

XP_020380989.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6706970-6707026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6721984-6722109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6724325-6724492:1:exon

LOC125487873
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6708228..6745453)
location: region:6708228-6745453:-1
so has part: feature:6708228-6745453:-1:exon
subclass of: SO_0000011

125487873
type: Gene
SIO_000068: ncbigene

position:6708228:-1
position: 6708228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6745453:-1
position: 6745453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6708228-6745453:-1:exon

LOC125487873
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487873
product: uncharacterized LOC125487873
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007266133.1
SIO_010081: LOC125487873
subclass of: SO_0000673
so part of: LOC125487873
location: complement(join(6708228..6709011,6714998..6715100,6716326..6716374,6745382..6745453))
location: region:6708228-6745453:-1
so has part: feature:6745382-6745453:-1:exon
so has part: feature:6716326-6716374:-1:exon
so has part: feature:6714998-6715100:-1:exon
so has part: feature:6708228-6709011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6745382-6745453:-1:exon

position:6745382:-1
position: 6745382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6716326-6716374:-1:exon

position:6716326:-1
position: 6716326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6716374:-1
position: 6716374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6714998-6715100:-1:exon

position:6714998:-1
position: 6714998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6715100:-1
position: 6715100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6708228-6709011:-1:exon

position:6709011:-1
position: 6709011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487872
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6739915..6743605
location: region:6739915-6743605:1
so has part: feature:6739915-6743605:1:exon
subclass of: SO_0000011

125487872
type: Gene
SIO_000068: ncbigene

position:6739915:1
position: 6739915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6743605:1
position: 6743605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6739915-6743605:1:exon

LOC125487872
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487872
product: uncharacterized LOC125487872
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007266132.1
SIO_010081: LOC125487872
subclass of: SO_0000673
so part of: LOC125487872
location: join(6739915..6740211,6743367..6743605)
location: region:6739915-6743605:1
so has part: feature:6739915-6740211:1:exon
so has part: feature:6743367-6743605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6739915-6740211:1:exon

position:6740211:1
position: 6740211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6743367-6743605:1:exon

position:6743367:1
position: 6743367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925098
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6746398..6831394
location: region:6746398-6831394:1
so has part: feature:6746398-6831394:1:exon
subclass of: SO_0000010

109925098
type: Gene
SIO_000068: ncbigene

position:6746398:1
position: 6746398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6831394:1
position: 6831394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6746398-6831394:1:exon

LOC109925098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925098
product: zinc finger and BTB domain-containing protein 7B-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620352.1
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6746398..6746634,6751739..6751860,6765353..6765459,6823104..6824167,6826084..6831394)
location: region:6746398-6831394:1
so has part: feature:6746398-6746634:1:exon
so has part: feature:6751739-6751860:1:exon
so has part: feature:6765353-6765459:1:exon
so has part: feature:6823104-6824167:1:exon
so has part: feature:6826084-6831394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6746398-6746634:1:exon

position:6746634:1
position: 6746634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6751739-6751860:1:exon

position:6751739:1
position: 6751739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6751860:1
position: 6751860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6765353-6765459:1:exon

position:6765353:1
position: 6765353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6765459:1
position: 6765459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6823104-6824167:1:exon

position:6823104:1
position: 6823104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6824167:1
position: 6824167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6826084-6831394:1:exon

position:6826084:1
position: 6826084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925098
product: zinc finger and BTB domain-containing protein 7B-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620353.1
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6746398..6746634,6751739..6751860,6823104..6824167,6826084..6831394)
location: region:6746398-6831394:1
so has part: feature:6746398-6746634:1:exon
so has part: feature:6751739-6751860:1:exon
so has part: feature:6823104-6824167:1:exon
so has part: feature:6826084-6831394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6746398-6746634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6751739-6751860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6823104-6824167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6826084-6831394:1:exon

LOC109925098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925098
product: zinc finger and BTB domain-containing protein 7B-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620355.1
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6746398..6746634,6823104..6824167,6826084..6831394)
location: region:6746398-6831394:1
so has part: feature:6746398-6746634:1:exon
so has part: feature:6823104-6824167:1:exon
so has part: feature:6826084-6831394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6746398-6746634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6823104-6824167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6826084-6831394:1:exon

LOC109925098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925098
product: zinc finger and BTB domain-containing protein 7B-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620354.1
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6787927..6788265,6823104..6824167,6826084..6831394)
location: region:6787927-6831394:1
so has part: feature:6787927-6788265:1:exon
so has part: feature:6823104-6824167:1:exon
so has part: feature:6826084-6831394:1:exon

position:6787927:1
position: 6787927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6787927-6788265:1:exon

position:6788265:1
position: 6788265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6823104-6824167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6826084-6831394:1:exon

LOC109925098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925098
product: zinc finger and BTB domain-containing protein 7B-like, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620356.1
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6798289..6798417,6823104..6824167,6826084..6831394)
location: region:6798289-6831394:1
so has part: feature:6798289-6798417:1:exon
so has part: feature:6823104-6824167:1:exon
so has part: feature:6826084-6831394:1:exon

position:6798289:1
position: 6798289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6798289-6798417:1:exon

position:6798417:1
position: 6798417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6823104-6824167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6826084-6831394:1:exon

LOC109925098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B-like
translation: MGAAEDELIGIPFPEHSSELLHSLNEQRRKGLLCDLTIVAQGLEYQTHRAVLAACSQYFRKLFTARPFRGQRDVCELDFVHPRVLGALLEFAYTATLTVSSSDMREVLQAARLLEIQCVTDACADILQSSGVSEPPQPNPDPPAIYTGACLYPEGPAQEEEAAPAVTDLQTLEVPKVRRRKRPKKLPRLLLNHRSRSLYRIVQPLQTSMDMDREPDQRQPKACRGERDPSPGTAGHQEGEGDGSFLGQEGGGPSCHQLVSSSPLPPLAGDEEGAELPASAYLSLVSNGLLGDGTLSSLDRAPGARRRKSQMPQECPICHKVIHGAGKLPRHIRTHTGEKPFACQVCGVRFTRNDKLKIHMRKHTGERPYSCNCCDARFLHSYDLKNHARLHTGDRPFECSQCRKAFVRIDHLQRHLKGQNCLEIRTRKRKGESQGLQEHPVNWERLAVDGTFPEEYGIERETPGIDCVFPEGYRIEKESPGIDGAFPEGYGIKKEPSATDRKIPEGYGIKRESPGIDGTFPEGYGIKKEPSVSDRKFPEGYGIKRESPGIDGAFPEGCGIKKESSGISRKFPEEYGIKKEPLAIDYTFPEGYRMRGAPLGLDNTLPERYRMTVEPLQTEGDSDMDDSRDWGHSTAKWNSQPGEDILVDPS
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6823113..6824167,6826084..6826981)
location: region:6823113-6826981:1
so has part: feature:6823113-6824167:1:exon
so has part: feature:6826084-6826981:1:exon

XP_048476309.1
type: Protein
SIO_000068: ncbiprotein

position:6823113:1
position: 6823113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6826981:1
position: 6826981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6823113-6824167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6826084-6826981:1:exon

LOC109925098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B-like
translation: MGAAEDELIGIPFPEHSSELLHSLNEQRRKGLLCDLTIVAQGLEYQTHRAVLAACSQYFRKLFTARPFRGQRDVCELDFVHPRVLGALLEFAYTATLTVSSSDMREVLQAARLLEIQCVTDACADILQSSGVSEPPQPNPDPPAIYTGACLYPEGPAQEEEAAPAVTDLQTLEVPKVRRRKRPKKLPRLLLNHRSRSLYRIVQPLQTSMDMDREPDQRQPKACRGERDPSPGTAGHQEGEGDGSFLGQEGGGPSCHQLVSSSPLPPLAGDEEGAELPASAYLSLVSNGLLGDGTLSSLDRAPGARRRKSQMPQECPICHKVIHGAGKLPRHIRTHTGEKPFACQVCGVRFTRNDKLKIHMRKHTGERPYSCNCCDARFLHSYDLKNHARLHTGDRPFECSQCRKAFVRIDHLQRHLKGQNCLEIRTRKRKGESQGLQEHPVNWERLAVDGTFPEEYGIERETPGIDCVFPEGYRIEKESPGIDGAFPEGYGIKKEPSATDRKIPEGYGIKRESPGIDGTFPEGYGIKKEPSVSDRKFPEGYGIKRESPGIDGAFPEGCGIKKESSGISRKFPEEYGIKKEPLAIDYTFPEGYRMRGAPLGLDNTLPERYRMTVEPLQTEGDSDMDDSRDWGHSTAKWNSQPGEDILVDPS
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6823113..6824167,6826084..6826981)
location: region:6823113-6826981:1
so has part: feature:6823113-6824167:1:exon
so has part: feature:6826084-6826981:1:exon

XP_048476310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6823113-6824167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6826084-6826981:1:exon

LOC109925098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B-like
translation: MGAAEDELIGIPFPEHSSELLHSLNEQRRKGLLCDLTIVAQGLEYQTHRAVLAACSQYFRKLFTARPFRGQRDVCELDFVHPRVLGALLEFAYTATLTVSSSDMREVLQAARLLEIQCVTDACADILQSSGVSEPPQPNPDPPAIYTGACLYPEGPAQEEEAAPAVTDLQTLEVPKVRRRKRPKKLPRLLLNHRSRSLYRIVQPLQTSMDMDREPDQRQPKACRGERDPSPGTAGHQEGEGDGSFLGQEGGGPSCHQLVSSSPLPPLAGDEEGAELPASAYLSLVSNGLLGDGTLSSLDRAPGARRRKSQMPQECPICHKVIHGAGKLPRHIRTHTGEKPFACQVCGVRFTRNDKLKIHMRKHTGERPYSCNCCDARFLHSYDLKNHARLHTGDRPFECSQCRKAFVRIDHLQRHLKGQNCLEIRTRKRKGESQGLQEHPVNWERLAVDGTFPEEYGIERETPGIDCVFPEGYRIEKESPGIDGAFPEGYGIKKEPSATDRKIPEGYGIKRESPGIDGTFPEGYGIKKEPSVSDRKFPEGYGIKRESPGIDGAFPEGCGIKKESSGISRKFPEEYGIKKEPLAIDYTFPEGYRMRGAPLGLDNTLPERYRMTVEPLQTEGDSDMDDSRDWGHSTAKWNSQPGEDILVDPS
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6823113..6824167,6826084..6826981)
location: region:6823113-6826981:1
so has part: feature:6823113-6824167:1:exon
so has part: feature:6826084-6826981:1:exon

XP_048476311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6823113-6824167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6826084-6826981:1:exon

LOC109925098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B-like
translation: MGAAEDELIGIPFPEHSSELLHSLNEQRRKGLLCDLTIVAQGLEYQTHRAVLAACSQYFRKLFTARPFRGQRDVCELDFVHPRVLGALLEFAYTATLTVSSSDMREVLQAARLLEIQCVTDACADILQSSGVSEPPQPNPDPPAIYTGACLYPEGPAQEEEAAPAVTDLQTLEVPKVRRRKRPKKLPRLLLNHRSRSLYRIVQPLQTSMDMDREPDQRQPKACRGERDPSPGTAGHQEGEGDGSFLGQEGGGPSCHQLVSSSPLPPLAGDEEGAELPASAYLSLVSNGLLGDGTLSSLDRAPGARRRKSQMPQECPICHKVIHGAGKLPRHIRTHTGEKPFACQVCGVRFTRNDKLKIHMRKHTGERPYSCNCCDARFLHSYDLKNHARLHTGDRPFECSQCRKAFVRIDHLQRHLKGQNCLEIRTRKRKGESQGLQEHPVNWERLAVDGTFPEEYGIERETPGIDCVFPEGYRIEKESPGIDGAFPEGYGIKKEPSATDRKIPEGYGIKRESPGIDGTFPEGYGIKKEPSVSDRKFPEGYGIKRESPGIDGAFPEGCGIKKESSGISRKFPEEYGIKKEPLAIDYTFPEGYRMRGAPLGLDNTLPERYRMTVEPLQTEGDSDMDDSRDWGHSTAKWNSQPGEDILVDPS
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6823113..6824167,6826084..6826981)
location: region:6823113-6826981:1
so has part: feature:6823113-6824167:1:exon
so has part: feature:6826084-6826981:1:exon

XP_048476312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6823113-6824167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6826084-6826981:1:exon

LOC109925098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B-like
translation: MGAAEDELIGIPFPEHSSELLHSLNEQRRKGLLCDLTIVAQGLEYQTHRAVLAACSQYFRKLFTARPFRGQRDVCELDFVHPRVLGALLEFAYTATLTVSSSDMREVLQAARLLEIQCVTDACADILQSSGVSEPPQPNPDPPAIYTGACLYPEGPAQEEEAAPAVTDLQTLEVPKVRRRKRPKKLPRLLLNHRSRSLYRIVQPLQTSMDMDREPDQRQPKACRGERDPSPGTAGHQEGEGDGSFLGQEGGGPSCHQLVSSSPLPPLAGDEEGAELPASAYLSLVSNGLLGDGTLSSLDRAPGARRRKSQMPQECPICHKVIHGAGKLPRHIRTHTGEKPFACQVCGVRFTRNDKLKIHMRKHTGERPYSCNCCDARFLHSYDLKNHARLHTGDRPFECSQCRKAFVRIDHLQRHLKGQNCLEIRTRKRKGESQGLQEHPVNWERLAVDGTFPEEYGIERETPGIDCVFPEGYRIEKESPGIDGAFPEGYGIKKEPSATDRKIPEGYGIKRESPGIDGTFPEGYGIKKEPSVSDRKFPEGYGIKRESPGIDGAFPEGCGIKKESSGISRKFPEEYGIKKEPLAIDYTFPEGYRMRGAPLGLDNTLPERYRMTVEPLQTEGDSDMDDSRDWGHSTAKWNSQPGEDILVDPS
SIO_010081: LOC109925098
subclass of: SO_0000673
so part of: LOC109925098
location: join(6823113..6824167,6826084..6826981)
location: region:6823113-6826981:1
so has part: feature:6823113-6824167:1:exon
so has part: feature:6826084-6826981:1:exon

XP_048476313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6823113-6824167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6826084-6826981:1:exon

LOC125487849
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6832238..6859195)
location: region:6832238-6859195:-1
so has part: feature:6832238-6859195:-1:exon
subclass of: SO_0000010

125487849
type: Gene
SIO_000068: ncbigene

position:6832238:-1
position: 6832238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6859195:-1
position: 6859195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6832238-6859195:-1:exon

LOC125487849
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487849
product: DC-STAMP domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_048620294.1
SIO_010081: LOC125487849
subclass of: SO_0000673
so part of: LOC125487849
location: complement(join(6832238..6832577,6834441..6834710,6836427..6836520,6839691..6839818,6843159..6843289,6844123..6844223,6845966..6846133,6848382..6848546,6851182..6851339,6851791..6852004,6852302..6852367,6854338..6854532,6855526..6855627,6856915..6857085,6858691..6859195))
location: region:6832238-6859195:-1
so has part: feature:6858691-6859195:-1:exon
so has part: feature:6856915-6857085:-1:exon
so has part: feature:6855526-6855627:-1:exon
so has part: feature:6854338-6854532:-1:exon
so has part: feature:6852302-6852367:-1:exon
so has part: feature:6851791-6852004:-1:exon
so has part: feature:6851182-6851339:-1:exon
so has part: feature:6848382-6848546:-1:exon
so has part: feature:6845966-6846133:-1:exon
so has part: feature:6844123-6844223:-1:exon
so has part: feature:6843159-6843289:-1:exon
so has part: feature:6839691-6839818:-1:exon
so has part: feature:6836427-6836520:-1:exon
so has part: feature:6834441-6834710:-1:exon
so has part: feature:6832238-6832577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6858691-6859195:-1:exon

position:6858691:-1
position: 6858691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6856915-6857085:-1:exon

position:6856915:-1
position: 6856915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6857085:-1
position: 6857085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6855526-6855627:-1:exon

position:6855526:-1
position: 6855526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6855627:-1
position: 6855627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6854338-6854532:-1:exon

position:6854338:-1
position: 6854338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6854532:-1
position: 6854532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6852302-6852367:-1:exon

position:6852302:-1
position: 6852302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6852367:-1
position: 6852367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6851791-6852004:-1:exon

position:6851791:-1
position: 6851791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6852004:-1
position: 6852004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6851182-6851339:-1:exon

position:6851182:-1
position: 6851182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6851339:-1
position: 6851339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6848382-6848546:-1:exon

position:6848382:-1
position: 6848382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6848546:-1
position: 6848546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6845966-6846133:-1:exon

position:6845966:-1
position: 6845966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6846133:-1
position: 6846133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6844123-6844223:-1:exon

position:6844123:-1
position: 6844123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6844223:-1
position: 6844223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6843159-6843289:-1:exon

position:6843159:-1
position: 6843159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6843289:-1
position: 6843289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6839691-6839818:-1:exon

position:6839691:-1
position: 6839691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6839818:-1
position: 6839818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6836427-6836520:-1:exon

position:6836427:-1
position: 6836427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6836520:-1
position: 6836520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6834441-6834710:-1:exon

position:6834441:-1
position: 6834441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6834710:-1
position: 6834710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6832238-6832577:-1:exon

position:6832577:-1
position: 6832577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487849
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DC-STAMP domain-containing protein 2-like
translation: MPSRNKILRAAWKRLNRGQAEPWKEKLRILVLKWIYILTGRPRKARYTVYRKRRAQMCFESLCLCCPEFECWKRADELLGAQAKPRPTQQARIEEDNVVKECLRSTGGLLFGITFTSVYGLFVLFIQEYNLWYCLVTTITIAVLLGLGMGLSAKIRVNALLMVPHIFSKQGKSFLLALAFGLTIEGPLQNIITNFTRGSESIACGAELALNQTKELLEKAKEPLVAALDKIKIIATKAKSVGDRVQKFFVSMKNSIRHIVRSLRNIMHWLSHIGIMCNKELGEPYKKCIRVFDDAISHCLSLLNIFGFLCYIVNVVKPLCGLATVIQLFCLIPSYIKDQLTKRVAEPISDALDNVAKEFEFNISIQHHYHLHMNQSKSLSNVALDIMEEIRDRVGVVYETIGIFGYSTTIIMIYLHIQALVYRKNYLFRDDYDNCYITNQFLEIDIMRAKTGKSTILPLRFQEACKYVRPWSYYMTVSEKQKYIVGFTTVLRQSVSVVIIILLDYTIFWILDMVSYHLQVEIVARSPVILGISINGTGYASDIYRNMVAAFDVVQSGNITVVSKRCAIIPSPPNYKIYSLIGVLYGMTFFIVLFGCYISRLRRYICSVYYPSRERERICYLYNQITSKRTSLLKALFQAVQKNSTDAGHTNFLLVLAARYKVFAWIAAFTGVSQKYCMACGRIAEDEDYENFVPCITPSCKGFYCTDCYQHMNNICSICMGPLAYQGDIDEEVDSSDSGKVQLWLSALESMKTRRDKAKRERKELRALLKQRIRAALYEDLGVTREKEAALKATLHRDMPGEAVRKRRKPSRQEAPGFHRDKSDSELDFGYQEKSPEEETSLEEPYEPSEFIAKRSSRDMVTVADLEEAERQRHRRRRRDSASASGSAGSEAGSLRDVRVDMPSATSTTVSSQAQTPRTYTHMDEDWKLVLPELG
SIO_010081: LOC125487849
subclass of: SO_0000673
so part of: LOC125487849
location: complement(join(6832238..6832577,6834441..6834710,6836427..6836520,6839691..6839818,6843159..6843289,6844123..6844223,6845966..6846133,6848382..6848546,6851182..6851339,6851791..6852004,6852302..6852367,6854338..6854532,6855526..6855627,6856915..6857085,6858691..6859195))
location: region:6832238-6859195:-1
so has part: feature:6858691-6859195:-1:exon
so has part: feature:6856915-6857085:-1:exon
so has part: feature:6855526-6855627:-1:exon
so has part: feature:6854338-6854532:-1:exon
so has part: feature:6852302-6852367:-1:exon
so has part: feature:6851791-6852004:-1:exon
so has part: feature:6851182-6851339:-1:exon
so has part: feature:6848382-6848546:-1:exon
so has part: feature:6845966-6846133:-1:exon
so has part: feature:6844123-6844223:-1:exon
so has part: feature:6843159-6843289:-1:exon
so has part: feature:6839691-6839818:-1:exon
so has part: feature:6836427-6836520:-1:exon
so has part: feature:6834441-6834710:-1:exon
so has part: feature:6832238-6832577:-1:exon

XP_048476251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6858691-6859195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6856915-6857085:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6855526-6855627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6854338-6854532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6852302-6852367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6851791-6852004:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6851182-6851339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6848382-6848546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6845966-6846133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6844123-6844223:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6843159-6843289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6839691-6839818:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6836427-6836520:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6834441-6834710:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6832238-6832577:-1:exon

LOC109924625
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <6880979..6906379
location: region:6880979-6906379:1
so has part: feature:6880979-6906379:1:exon
subclass of: SO_0000010

109924625
type: Gene
SIO_000068: ncbigene

position:6880979:1
position: 6880979
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6906379:1
position: 6906379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6880979-6906379:1:exon

LOC109924625
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924625
product: pogo transposable element derived with ZNF domain
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020524624.2
SIO_010081: LOC109924625
subclass of: SO_0000673
so part of: LOC109924625
location: join(<6880979..6881423,6881630..6881752,6881887..6882084,6883172..6883272,6884922..6885253,6887720..6887877,6889639..6889739,6890466..6890612,6891117..6891251,6892086..6892312,6893310..6893459,6894769..6894825,6896147..6896268,6897082..6897237,6898789..6898825,6900568..6906379)
location: region:6880979-6906379:1
so has part: feature:6880979-6881423:1:exon
so has part: feature:6881630-6881752:1:exon
so has part: feature:6881887-6882084:1:exon
so has part: feature:6883172-6883272:1:exon
so has part: feature:6884922-6885253:1:exon
so has part: feature:6887720-6887877:1:exon
so has part: feature:6889639-6889739:1:exon
so has part: feature:6890466-6890612:1:exon
so has part: feature:6891117-6891251:1:exon
so has part: feature:6892086-6892312:1:exon
so has part: feature:6893310-6893459:1:exon
so has part: feature:6894769-6894825:1:exon
so has part: feature:6896147-6896268:1:exon
so has part: feature:6897082-6897237:1:exon
so has part: feature:6898789-6898825:1:exon
so has part: feature:6900568-6906379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6880979-6881423:1:exon

position:6881423:1
position: 6881423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6881630-6881752:1:exon

position:6881630:1
position: 6881630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6881752:1
position: 6881752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6881887-6882084:1:exon

position:6881887:1
position: 6881887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6882084:1
position: 6882084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6883172-6883272:1:exon

position:6883172:1
position: 6883172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6883272:1
position: 6883272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6884922-6885253:1:exon

position:6884922:1
position: 6884922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6885253:1
position: 6885253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6887720-6887877:1:exon

position:6887720:1
position: 6887720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6887877:1
position: 6887877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6889639-6889739:1:exon

position:6889639:1
position: 6889639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6889739:1
position: 6889739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6890466-6890612:1:exon

position:6890466:1
position: 6890466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6890612:1
position: 6890612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6891117-6891251:1:exon

position:6891117:1
position: 6891117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6891251:1
position: 6891251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6892086-6892312:1:exon

position:6892086:1
position: 6892086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6892312:1
position: 6892312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6893310-6893459:1:exon

position:6893310:1
position: 6893310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6893459:1
position: 6893459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6894769-6894825:1:exon

position:6894769:1
position: 6894769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6894825:1
position: 6894825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6896147-6896268:1:exon

position:6896147:1
position: 6896147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6896268:1
position: 6896268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6897082-6897237:1:exon

position:6897082:1
position: 6897082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6897237:1
position: 6897237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6898789-6898825:1:exon

position:6898789:1
position: 6898789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6898825:1
position: 6898825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6900568-6906379:1:exon

position:6900568:1
position: 6900568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109924625
translation: SRNICLFLYLSLSLFPTPTFTPPPPAATQFVKSAVGVPQLWSPVTSIRPATSTFPGSVTTVIPATVTIRSTVPPVAQKTPAQTSPTQSHLQPKCLTQPMASLAPSQPPHSHLQPQPPALPRPQAHSHSQPSMLHHPHSLQLPNHDHKLGGSVTGRARIEEDRQKSQKGAGDVNLQSGWAEWPQPPASRFVNFLQNTNLIRLKATESASPEIRPKPEEVVKSSVLPPVQITTITTTAAAATQLIHKNSLNHTTPFKLPESNMNNGVPIPMDCPKCNIHFNIMESLKVHMAYCCPQLLNPPTPTKASQQQPHPAPPAPPPPPPPPPPPPPPPPTPPTVPQQQQQQQPSAKLAEPTQGKLIMLVDDFYYGRDEGSTYQMLQEMKTNTTFRCLSCLKRLKNNIRFMNHMKHHLELEQQNEDTIENHTTCQHCFRQYATPFQLQCHIENVHSPYETTTKCKICELAFETEQLFLQHMKDTHKPGEMPYVCQVCEYRSSVYLEVDNHFRMIHEDTKNLLCPYCFKVLKNSSAYQQHYMKHQKKSVYPCNKCRLQFISAKEKMEHKVEHHKTFKKPKQLEGLQPGTKVTIRTSMGQARAAGGPVQEVPARKVYPPVMPPKPQEPPACSTVHTVPSVPKPVPKAEKRKAVERISPLLIDMQDIRKLYGNQVCLECNIDITNVSNVSNHFPTYVHCSRCRYSTSCSRAYADHMISYHTQRGKPKYLMFGKVKKSAILLVCTSCTFAVETGDGDEMAQHLDQNPGHGPCCFVTFSVGDRKGKAAKVMEEPPPVLQSKLTASDSEMEEVGNGSAQNPKADEERKDESLDPPISEVRSPIAKSQQVKTVRLSTVCSSNYINAKISTWPALASSPTPPAAANDGNELGAGEGHSAPPEPGSPICVEEDRSSSTPIYIAEDKNLSSPEHPAEEENRSSPVCVAEDTSDSSPVLVEEDKNVLTPVCEEENQNGSSPPCVANEDEAASNLESVEEEGELSKADDDGESQHQELPPRRKSLSEHEFKVVLHALCCGMRAATERYSETRSQVEQWLNECAQQLDLLSVHSESGASTLLSSEAEERLVEWVLVQRERQLPLTEETFLLRLSELLGSQDQVGDSDSFRCLWGVGFLLRHNLIAYAKITVARELPREMEDNARSFLEFAQRQIAGRDFPRRMIGNMDEIPIFLEPEVLSRPEGTPGGLRVTGTGQPQFVVVFTILADGGLLPTMVFSRGGLPPWLTVPTGVLLEVKETGHGESEVLELWLNRVWRQHAAQARRGRSALVLDADRQHLSDGFIDRLSRCCSLPLIIPGGCTSRLQPLDMCVSQAFRNFLQKRWAEYAREARCYRDVYGDVLQSLLNWVAEVADFIAANGDLVRQSFVASSLLPGTTSAQHRVAVQEELVSFLQEQLELGTRPDENGGGDRSPSGLPLDPRLLTRLFEAESDTDSFPGFPENDL
SIO_010081: LOC109924625
subclass of: SO_0000673
so part of: LOC109924625
location: join(<6880979..6881423,6881630..6881752,6881887..6882084,6883172..6883272,6884922..6885253,6887720..6887877,6889639..6889739,6890466..6890612,6891117..6891251,6892086..6892312,6893310..6893459,6894769..6894825,6896147..6896268,6897082..6897237,6898789..6898825,6900568..6902404)
location: region:6880979-6902404:1
so has part: feature:6880979-6881423:1:exon
so has part: feature:6881630-6881752:1:exon
so has part: feature:6881887-6882084:1:exon
so has part: feature:6883172-6883272:1:exon
so has part: feature:6884922-6885253:1:exon
so has part: feature:6887720-6887877:1:exon
so has part: feature:6889639-6889739:1:exon
so has part: feature:6890466-6890612:1:exon
so has part: feature:6891117-6891251:1:exon
so has part: feature:6892086-6892312:1:exon
so has part: feature:6893310-6893459:1:exon
so has part: feature:6894769-6894825:1:exon
so has part: feature:6896147-6896268:1:exon
so has part: feature:6897082-6897237:1:exon
so has part: feature:6898789-6898825:1:exon
so has part: feature:6900568-6902404:1:exon

XP_020380213.2
type: Protein
SIO_000068: ncbiprotein

position:6902404:1
position: 6902404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6880979-6881423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6881630-6881752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6881887-6882084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6883172-6883272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6884922-6885253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6887720-6887877:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6889639-6889739:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6890466-6890612:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6891117-6891251:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6892086-6892312:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6893310-6893459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6894769-6894825:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6896147-6896268:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6897082-6897237:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6898789-6898825:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6900568-6902404:1:exon

psmb4
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: psmb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6941491..6950183)
location: region:6941491-6950183:-1
so has part: feature:6941491-6950183:-1:exon
subclass of: SO_0000010

109924066
type: Gene
SIO_000068: ncbigene

position:6941491:-1
position: 6941491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6950183:-1
position: 6950183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6941491-6950183:-1:exon

psmb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: psmb4
product: proteasome 20S subunit beta 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620365.1
SIO_010081: psmb4
subclass of: SO_0000673
so part of: psmb4
location: complement(join(6941491..6941704,6943212..6943300,6945478..6945591,6945684..6945765,6947156..6947218,6947676..6947759,6947890..6948096,6949867..6950183))
location: region:6941491-6950183:-1
so has part: feature:6949867-6950183:-1:exon
so has part: feature:6947890-6948096:-1:exon
so has part: feature:6947676-6947759:-1:exon
so has part: feature:6947156-6947218:-1:exon
so has part: feature:6945684-6945765:-1:exon
so has part: feature:6945478-6945591:-1:exon
so has part: feature:6943212-6943300:-1:exon
so has part: feature:6941491-6941704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6949867-6950183:-1:exon

position:6949867:-1
position: 6949867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6947890-6948096:-1:exon

position:6947890:-1
position: 6947890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6948096:-1
position: 6948096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6947676-6947759:-1:exon

position:6947676:-1
position: 6947676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6947759:-1
position: 6947759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6947156-6947218:-1:exon

position:6947156:-1
position: 6947156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6947218:-1
position: 6947218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6945684-6945765:-1:exon

position:6945684:-1
position: 6945684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6945765:-1
position: 6945765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6945478-6945591:-1:exon

position:6945478:-1
position: 6945478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6945591:-1
position: 6945591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6943212-6943300:-1:exon

position:6943212:-1
position: 6943212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6943300:-1
position: 6943300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6941491-6941704:-1:exon

position:6941704:-1
position: 6941704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

psmb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: psmb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-4
translation: MAAVTGGISVPGPGRFYSVPGSELPGVVSHTLSPMVTGTSVLGVKFDGGVILAADMLGSYGSMARFRNISRLMKVNDNTVLGASGDYADYQYLKQAIEQMMIDEELLGDGHSYSPKAIHSWLTRVMYNRRCKMNPLWNTVIIGGMNNGESFLGYVDKLGVAYEASTVATGFGAYLAQPLMREVAEKQLMSKDEARQLIERCLKVLYYRDARSYNRYQIATVSAAGVQIEGPMSAETNWEIAHMISGFE
SIO_010081: psmb4
subclass of: SO_0000673
so part of: psmb4
location: complement(join(6941692..6941704,6943212..6943300,6945478..6945591,6945684..6945765,6947156..6947218,6947676..6947759,6947890..6948096,6949867..6949961))
location: region:6941692-6949961:-1
so has part: feature:6949867-6949961:-1:exon
so has part: feature:6947890-6948096:-1:exon
so has part: feature:6947676-6947759:-1:exon
so has part: feature:6947156-6947218:-1:exon
so has part: feature:6945684-6945765:-1:exon
so has part: feature:6945478-6945591:-1:exon
so has part: feature:6943212-6943300:-1:exon
so has part: feature:6941692-6941704:-1:exon

XP_048476322.1
type: Protein
SIO_000068: ncbiprotein

position:6941692:-1
position: 6941692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6949961:-1
position: 6949961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6949867-6949961:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6947890-6948096:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6947676-6947759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6947156-6947218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6945684-6945765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6945478-6945591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6943212-6943300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6941692-6941704:-1:exon

LOC125487874
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6952743..7002612
location: region:6952743-7002612:1
so has part: feature:6952743-7002612:1:exon
subclass of: SO_0000010

125487874
type: Gene
SIO_000068: ncbigene

position:6952743:1
position: 6952743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7002612:1
position: 7002612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6952743-7002612:1:exon

LOC125487874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487874
product: transcription factor 12-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048620362.1
SIO_010081: LOC125487874
subclass of: SO_0000673
so part of: LOC125487874
location: join(6952743..6952988,6960019..6960115,6963810..6963946,6964100..6964229,6964334..6964398,6969636..6969717,6973342..6973415,6976975..6977187,6991592..6991712,6992493..6992652,6994708..6994937,6999755..6999896,7001949..7002612)
location: region:6952743-7002612:1
so has part: feature:6952743-6952988:1:exon
so has part: feature:6960019-6960115:1:exon
so has part: feature:6963810-6963946:1:exon
so has part: feature:6964100-6964229:1:exon
so has part: feature:6964334-6964398:1:exon
so has part: feature:6969636-6969717:1:exon
so has part: feature:6973342-6973415:1:exon
so has part: feature:6976975-6977187:1:exon
so has part: feature:6991592-6991712:1:exon
so has part: feature:6992493-6992652:1:exon
so has part: feature:6994708-6994937:1:exon
so has part: feature:6999755-6999896:1:exon
so has part: feature:7001949-7002612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6952743-6952988:1:exon

position:6952988:1
position: 6952988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6960019-6960115:1:exon

position:6960019:1
position: 6960019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6960115:1
position: 6960115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6963810-6963946:1:exon

position:6963810:1
position: 6963810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6963946:1
position: 6963946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6964100-6964229:1:exon

position:6964100:1
position: 6964100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6964229:1
position: 6964229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6964334-6964398:1:exon

position:6964334:1
position: 6964334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6964398:1
position: 6964398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6969636-6969717:1:exon

position:6969636:1
position: 6969636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6969717:1
position: 6969717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6973342-6973415:1:exon

position:6973342:1
position: 6973342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6973415:1
position: 6973415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6976975-6977187:1:exon

position:6976975:1
position: 6976975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6977187:1
position: 6977187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6991592-6991712:1:exon

position:6991592:1
position: 6991592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6991712:1
position: 6991712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6992493-6992652:1:exon

position:6992493:1
position: 6992493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6992652:1
position: 6992652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6994708-6994937:1:exon

position:6994708:1
position: 6994708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6994937:1
position: 6994937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6999755-6999896:1:exon

position:6999755:1
position: 6999755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6999896:1
position: 6999896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7001949-7002612:1:exon

position:7001949:1
position: 7001949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487874
product: transcription factor 12-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048620363.1
SIO_010081: LOC125487874
subclass of: SO_0000673
so part of: LOC125487874
location: join(6952743..6952988,6960019..6960115,6963810..6963946,6964100..6964229,6964334..6964398,6969639..6969717,6973342..6973415,6976975..6977187,6991592..6991712,6992493..6992652,6994708..6994937,6999755..6999896,7001949..7002612)
location: region:6952743-7002612:1
so has part: feature:6952743-6952988:1:exon
so has part: feature:6960019-6960115:1:exon
so has part: feature:6963810-6963946:1:exon
so has part: feature:6964100-6964229:1:exon
so has part: feature:6964334-6964398:1:exon
so has part: feature:6969639-6969717:1:exon
so has part: feature:6973342-6973415:1:exon
so has part: feature:6976975-6977187:1:exon
so has part: feature:6991592-6991712:1:exon
so has part: feature:6992493-6992652:1:exon
so has part: feature:6994708-6994937:1:exon
so has part: feature:6999755-6999896:1:exon
so has part: feature:7001949-7002612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6952743-6952988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6960019-6960115:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6963810-6963946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6964100-6964229:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6964334-6964398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6969639-6969717:1:exon

position:6969639:1
position: 6969639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6973342-6973415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6976975-6977187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6991592-6991712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6992493-6992652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6994708-6994937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6999755-6999896:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7001949-7002612:1:exon

LOC125487874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487874
product: transcription factor 12-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048620364.1
SIO_010081: LOC125487874
subclass of: SO_0000673
so part of: LOC125487874
location: join(6952743..6952988,6960019..6960115,6963813..6963946,6964100..6964229,6964334..6964398,6969636..6969717,6973342..6973415,6976975..6977187,6991592..6991712,6992493..6992652,6994708..6994937,6999755..6999896,7001949..7002612)
location: region:6952743-7002612:1
so has part: feature:6952743-6952988:1:exon
so has part: feature:6960019-6960115:1:exon
so has part: feature:6963813-6963946:1:exon
so has part: feature:6964100-6964229:1:exon
so has part: feature:6964334-6964398:1:exon
so has part: feature:6969636-6969717:1:exon
so has part: feature:6973342-6973415:1:exon
so has part: feature:6976975-6977187:1:exon
so has part: feature:6991592-6991712:1:exon
so has part: feature:6992493-6992652:1:exon
so has part: feature:6994708-6994937:1:exon
so has part: feature:6999755-6999896:1:exon
so has part: feature:7001949-7002612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6952743-6952988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6960019-6960115:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6963813-6963946:1:exon

position:6963813:1
position: 6963813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6964100-6964229:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6964334-6964398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6969636-6969717:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6973342-6973415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6976975-6977187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6991592-6991712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6992493-6992652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6994708-6994937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6999755-6999896:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7001949-7002612:1:exon

LOC125487874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor 12-like isoform X1
translation: MYCTSPGSEVGNNALMYFYNGKAVYAQSQNADELRESYLSLKGPSSMLSSSFLLPAEGHHTPSDLWPTSGTINQTSYTGLPAAPSSHLSQGTSYGNLQERLPYPPSEGNTTVPPVASLHRSANSSTAFVTSSHTPPLNTSDTLMGGRVSVAGSSQTGDALGKALASQIYSPDPTNNSYTSNPPTPVSSPPCLPGSTQWSRPAVQNTASPNYESPLHSLQSRMEDRLDRLEDAIHILRNHAVGPSSGLASGHGDLHSLLGPSPHGGLVATLGSGYTVPNLGPSARPATSMVTTHREETTNLHPSLSGLPSVVSAALAAAALNQPTQDVCRAFSSGGCSQALSSETKSDDKEKESSLGSQLEDDLSEDDDANDPRKDKLGRSRSSNHEDDELNPGQKAEREKDRRMANNARERLRVRDINEAFKELGRMCQLHMKNDKPQTKLLILHQAVSVILGLEQQVRERNLNPKAACLKRREEEKISNGESTSTHLVVHQGIGDSPNPMGHM
SIO_010081: LOC125487874
subclass of: SO_0000673
so part of: LOC125487874
location: join(6952920..6952988,6960019..6960115,6963810..6963946,6964100..6964229,6964334..6964398,6969636..6969717,6973342..6973415,6976975..6977187,6991592..6991712,6992493..6992652,6994708..6994937,6999755..6999891)
location: region:6952920-6999891:1
so has part: feature:6952920-6952988:1:exon
so has part: feature:6960019-6960115:1:exon
so has part: feature:6963810-6963946:1:exon
so has part: feature:6964100-6964229:1:exon
so has part: feature:6964334-6964398:1:exon
so has part: feature:6969636-6969717:1:exon
so has part: feature:6973342-6973415:1:exon
so has part: feature:6976975-6977187:1:exon
so has part: feature:6991592-6991712:1:exon
so has part: feature:6992493-6992652:1:exon
so has part: feature:6994708-6994937:1:exon
so has part: feature:6999755-6999891:1:exon

XP_048476319.1
type: Protein
SIO_000068: ncbiprotein

position:6952920:1
position: 6952920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6999891:1
position: 6999891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6952920-6952988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6960019-6960115:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6963810-6963946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6964100-6964229:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6964334-6964398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6969636-6969717:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6973342-6973415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6976975-6977187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6991592-6991712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6992493-6992652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6994708-6994937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6999755-6999891:1:exon

LOC125487874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor 12-like isoform X2
translation: MYCTSPGSEVGNNALMYFYNGKAVYAQSQNADELRESYLSLKGPSSMLSSSFLLPAEGHHTPSDLWPTSGTINQTSYTGLPAAPSSHLSQGTSYGNLQERLPYPPSEGNTTVPPVASLHRSANSSTAFVTSSHTPPLNTSDTLMGGRVSVAGSSQTGDALGKALASIYSPDPTNNSYTSNPPTPVSSPPCLPGSTQWSRPAVQNTASPNYESPLHSLQSRMEDRLDRLEDAIHILRNHAVGPSSGLASGHGDLHSLLGPSPHGGLVATLGSGYTVPNLGPSARPATSMVTTHREETTNLHPSLSGLPSVVSAALAAAALNQPTQDVCRAFSSGGCSQALSSETKSDDKEKESSLGSQLEDDLSEDDDANDPRKDKLGRSRSSNHEDDELNPGQKAEREKDRRMANNARERLRVRDINEAFKELGRMCQLHMKNDKPQTKLLILHQAVSVILGLEQQVRERNLNPKAACLKRREEEKISNGESTSTHLVVHQGIGDSPNPMGHM
SIO_010081: LOC125487874
subclass of: SO_0000673
so part of: LOC125487874
location: join(6952920..6952988,6960019..6960115,6963810..6963946,6964100..6964229,6964334..6964398,6969639..6969717,6973342..6973415,6976975..6977187,6991592..6991712,6992493..6992652,6994708..6994937,6999755..6999891)
location: region:6952920-6999891:1
so has part: feature:6952920-6952988:1:exon
so has part: feature:6960019-6960115:1:exon
so has part: feature:6963810-6963946:1:exon
so has part: feature:6964100-6964229:1:exon
so has part: feature:6964334-6964398:1:exon
so has part: feature:6969639-6969717:1:exon
so has part: feature:6973342-6973415:1:exon
so has part: feature:6976975-6977187:1:exon
so has part: feature:6991592-6991712:1:exon
so has part: feature:6992493-6992652:1:exon
so has part: feature:6994708-6994937:1:exon
so has part: feature:6999755-6999891:1:exon

XP_048476320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6952920-6952988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6960019-6960115:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6963810-6963946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6964100-6964229:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6964334-6964398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6969639-6969717:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6973342-6973415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6976975-6977187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6991592-6991712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6992493-6992652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6994708-6994937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6999755-6999891:1:exon

LOC125487874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor 12-like isoform X3
translation: MYCTSPGSEVGNNALMYFYNGKAVYAQSQNADELRESYLSLKGPSSMLSSSFLLPEGHHTPSDLWPTSGTINQTSYTGLPAAPSSHLSQGTSYGNLQERLPYPPSEGNTTVPPVASLHRSANSSTAFVTSSHTPPLNTSDTLMGGRVSVAGSSQTGDALGKALASQIYSPDPTNNSYTSNPPTPVSSPPCLPGSTQWSRPAVQNTASPNYESPLHSLQSRMEDRLDRLEDAIHILRNHAVGPSSGLASGHGDLHSLLGPSPHGGLVATLGSGYTVPNLGPSARPATSMVTTHREETTNLHPSLSGLPSVVSAALAAAALNQPTQDVCRAFSSGGCSQALSSETKSDDKEKESSLGSQLEDDLSEDDDANDPRKDKLGRSRSSNHEDDELNPGQKAEREKDRRMANNARERLRVRDINEAFKELGRMCQLHMKNDKPQTKLLILHQAVSVILGLEQQVRERNLNPKAACLKRREEEKISNGESTSTHLVVHQGIGDSPNPMGHM
SIO_010081: LOC125487874
subclass of: SO_0000673
so part of: LOC125487874
location: join(6952920..6952988,6960019..6960115,6963813..6963946,6964100..6964229,6964334..6964398,6969636..6969717,6973342..6973415,6976975..6977187,6991592..6991712,6992493..6992652,6994708..6994937,6999755..6999891)
location: region:6952920-6999891:1
so has part: feature:6952920-6952988:1:exon
so has part: feature:6960019-6960115:1:exon
so has part: feature:6963813-6963946:1:exon
so has part: feature:6964100-6964229:1:exon
so has part: feature:6964334-6964398:1:exon
so has part: feature:6969636-6969717:1:exon
so has part: feature:6973342-6973415:1:exon
so has part: feature:6976975-6977187:1:exon
so has part: feature:6991592-6991712:1:exon
so has part: feature:6992493-6992652:1:exon
so has part: feature:6994708-6994937:1:exon
so has part: feature:6999755-6999891:1:exon

XP_048476321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6952920-6952988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6960019-6960115:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6963813-6963946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6964100-6964229:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6964334-6964398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6969636-6969717:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6973342-6973415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6976975-6977187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6991592-6991712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6992493-6992652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6994708-6994937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6999755-6999891:1:exon

cgnb
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cgnb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6980605..7131958
location: region:6980605-7131958:1
so has part: feature:6980605-7131958:1:exon
subclass of: SO_0000010

109919754
type: Gene
SIO_000068: ncbigene

position:6980605:1
position: 6980605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7131958:1
position: 7131958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6980605-7131958:1:exon

cgnb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cgnb
product: cingulin b, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620358.1
SIO_010081: cgnb
subclass of: SO_0000673
so part of: cgnb
location: join(6980605..6980721,7057575..7058982,7065219..7065316,7067782..7067851,7071909..7072010,7074217..7074350,7079183..7079321,7080579..7080791,7087379..7087527,7088635..7088776,7091682..7091894,7094059..7094265,7095265..7095369,7097900..7098052,7100489..7100659,7105521..7105682,7106334..7106423,7114634..7114717,7115790..7115908,7118964..7119072,7121456..7121619,7128756..7131958)
location: region:6980605-7131958:1
so has part: feature:6980605-6980721:1:exon
so has part: feature:7057575-7058982:1:exon
so has part: feature:7065219-7065316:1:exon
so has part: feature:7067782-7067851:1:exon
so has part: feature:7071909-7072010:1:exon
so has part: feature:7074217-7074350:1:exon
so has part: feature:7079183-7079321:1:exon
so has part: feature:7080579-7080791:1:exon
so has part: feature:7087379-7087527:1:exon
so has part: feature:7088635-7088776:1:exon
so has part: feature:7091682-7091894:1:exon
so has part: feature:7094059-7094265:1:exon
so has part: feature:7095265-7095369:1:exon
so has part: feature:7097900-7098052:1:exon
so has part: feature:7100489-7100659:1:exon
so has part: feature:7105521-7105682:1:exon
so has part: feature:7106334-7106423:1:exon
so has part: feature:7114634-7114717:1:exon
so has part: feature:7115790-7115908:1:exon
so has part: feature:7118964-7119072:1:exon
so has part: feature:7121456-7121619:1:exon
so has part: feature:7128756-7131958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6980605-6980721:1:exon

position:6980721:1
position: 6980721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7057575-7058982:1:exon

position:7057575:1
position: 7057575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7058982:1
position: 7058982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7065219-7065316:1:exon

position:7065219:1
position: 7065219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7065316:1
position: 7065316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7067782-7067851:1:exon

position:7067782:1
position: 7067782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7067851:1
position: 7067851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7071909-7072010:1:exon

position:7071909:1
position: 7071909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7072010:1
position: 7072010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7074217-7074350:1:exon

position:7074217:1
position: 7074217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7074350:1
position: 7074350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7079183-7079321:1:exon

position:7079183:1
position: 7079183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7079321:1
position: 7079321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7080579-7080791:1:exon

position:7080579:1
position: 7080579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7080791:1
position: 7080791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7087379-7087527:1:exon

position:7087379:1
position: 7087379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7087527:1
position: 7087527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7088635-7088776:1:exon

position:7088635:1
position: 7088635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7088776:1
position: 7088776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7091682-7091894:1:exon

position:7091682:1
position: 7091682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7091894:1
position: 7091894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7094059-7094265:1:exon

position:7094059:1
position: 7094059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7094265:1
position: 7094265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7095265-7095369:1:exon

position:7095265:1
position: 7095265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7095369:1
position: 7095369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7097900-7098052:1:exon

position:7097900:1
position: 7097900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7098052:1
position: 7098052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7100489-7100659:1:exon

position:7100489:1
position: 7100489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7100659:1
position: 7100659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7105521-7105682:1:exon

position:7105521:1
position: 7105521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7105682:1
position: 7105682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7106334-7106423:1:exon

position:7106334:1
position: 7106334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7106423:1
position: 7106423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7114634-7114717:1:exon

position:7114634:1
position: 7114634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7114717:1
position: 7114717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7115790-7115908:1:exon

position:7115790:1
position: 7115790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7115908:1
position: 7115908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7118964-7119072:1:exon

position:7118964:1
position: 7118964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7119072:1
position: 7119072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7121456-7121619:1:exon

position:7121456:1
position: 7121456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7121619:1
position: 7121619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7128756-7131958:1:exon

position:7128756:1
position: 7128756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cgnb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cgnb
product: cingulin b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048620361.1
SIO_010081: cgnb
subclass of: SO_0000673
so part of: cgnb
location: join(6980605..6980721,7057575..7058982,7065219..7065316,7067782..7067851,7071909..7072010,7074217..7074350,7079183..7079321,7080579..7080791,7087379..7087527,7088635..7088776,7091682..7091894,7094059..7094265,7095265..7095369,7097900..7098052,7100489..7100659,7105521..7105682,7106334..7106423,7114634..7114717,7115790..7115908,7118964..7119072,7121456..7121619,7125458..7125494,7128756..7128866)
location: region:6980605-7128866:1
so has part: feature:6980605-6980721:1:exon
so has part: feature:7057575-7058982:1:exon
so has part: feature:7065219-7065316:1:exon
so has part: feature:7067782-7067851:1:exon
so has part: feature:7071909-7072010:1:exon
so has part: feature:7074217-7074350:1:exon
so has part: feature:7079183-7079321:1:exon
so has part: feature:7080579-7080791:1:exon
so has part: feature:7087379-7087527:1:exon
so has part: feature:7088635-7088776:1:exon
so has part: feature:7091682-7091894:1:exon
so has part: feature:7094059-7094265:1:exon
so has part: feature:7095265-7095369:1:exon
so has part: feature:7097900-7098052:1:exon
so has part: feature:7100489-7100659:1:exon
so has part: feature:7105521-7105682:1:exon
so has part: feature:7106334-7106423:1:exon
so has part: feature:7114634-7114717:1:exon
so has part: feature:7115790-7115908:1:exon
so has part: feature:7118964-7119072:1:exon
so has part: feature:7121456-7121619:1:exon
so has part: feature:7125458-7125494:1:exon
so has part: feature:7128756-7128866:1:exon

position:7128866:1
position: 7128866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6980605-6980721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7057575-7058982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7065219-7065316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7067782-7067851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7071909-7072010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7074217-7074350:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7079183-7079321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7080579-7080791:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7087379-7087527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7088635-7088776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7091682-7091894:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7094059-7094265:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7095265-7095369:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7097900-7098052:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7100489-7100659:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7105521-7105682:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7106334-7106423:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7114634-7114717:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7115790-7115908:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7118964-7119072:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7121456-7121619:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7125458-7125494:1:exon

position:7125458:1
position: 7125458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7125494:1
position: 7125494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7128756-7128866:1:exon

cgnb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cgnb
product: cingulin b, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620359.1
SIO_010081: cgnb
subclass of: SO_0000673
so part of: cgnb
location: join(6981316..6981423,7057575..7058982,7065219..7065316,7067782..7067851,7071909..7072010,7074217..7074350,7079183..7079321,7080579..7080791,7087379..7087527,7088635..7088776,7091682..7091894,7094059..7094265,7095265..7095369,7097900..7098052,7100489..7100659,7105521..7105682,7106334..7106423,7114634..7114717,7115790..7115908,7118964..7119072,7121456..7121619,7128756..7131958)
location: region:6981316-7131958:1
so has part: feature:6981316-6981423:1:exon
so has part: feature:7057575-7058982:1:exon
so has part: feature:7065219-7065316:1:exon
so has part: feature:7067782-7067851:1:exon
so has part: feature:7071909-7072010:1:exon
so has part: feature:7074217-7074350:1:exon
so has part: feature:7079183-7079321:1:exon
so has part: feature:7080579-7080791:1:exon
so has part: feature:7087379-7087527:1:exon
so has part: feature:7088635-7088776:1:exon
so has part: feature:7091682-7091894:1:exon
so has part: feature:7094059-7094265:1:exon
so has part: feature:7095265-7095369:1:exon
so has part: feature:7097900-7098052:1:exon
so has part: feature:7100489-7100659:1:exon
so has part: feature:7105521-7105682:1:exon
so has part: feature:7106334-7106423:1:exon
so has part: feature:7114634-7114717:1:exon
so has part: feature:7115790-7115908:1:exon
so has part: feature:7118964-7119072:1:exon
so has part: feature:7121456-7121619:1:exon
so has part: feature:7128756-7131958:1:exon

position:6981316:1
position: 6981316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6981316-6981423:1:exon

position:6981423:1
position: 6981423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7057575-7058982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7065219-7065316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7067782-7067851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7071909-7072010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7074217-7074350:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7079183-7079321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7080579-7080791:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7087379-7087527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7088635-7088776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7091682-7091894:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7094059-7094265:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7095265-7095369:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7097900-7098052:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7100489-7100659:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7105521-7105682:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7106334-7106423:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7114634-7114717:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7115790-7115908:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7118964-7119072:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7121456-7121619:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7128756-7131958:1:exon

cgnb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cgnb
product: cingulin b, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620360.1
SIO_010081: cgnb
subclass of: SO_0000673
so part of: cgnb
location: join(7041395..7041421,7057575..7058982,7065219..7065316,7067782..7067851,7071909..7072010,7074217..7074350,7079183..7079321,7080579..7080791,7087379..7087527,7088635..7088776,7091682..7091894,7094059..7094265,7095265..7095369,7097900..7098052,7100489..7100659,7105521..7105682,7106334..7106423,7114634..7114717,7115790..7115908,7118964..7119072,7121456..7121619,7128756..7131958)
location: region:7041395-7131958:1
so has part: feature:7041395-7041421:1:exon
so has part: feature:7057575-7058982:1:exon
so has part: feature:7065219-7065316:1:exon
so has part: feature:7067782-7067851:1:exon
so has part: feature:7071909-7072010:1:exon
so has part: feature:7074217-7074350:1:exon
so has part: feature:7079183-7079321:1:exon
so has part: feature:7080579-7080791:1:exon
so has part: feature:7087379-7087527:1:exon
so has part: feature:7088635-7088776:1:exon
so has part: feature:7091682-7091894:1:exon
so has part: feature:7094059-7094265:1:exon
so has part: feature:7095265-7095369:1:exon
so has part: feature:7097900-7098052:1:exon
so has part: feature:7100489-7100659:1:exon
so has part: feature:7105521-7105682:1:exon
so has part: feature:7106334-7106423:1:exon
so has part: feature:7114634-7114717:1:exon
so has part: feature:7115790-7115908:1:exon
so has part: feature:7118964-7119072:1:exon
so has part: feature:7121456-7121619:1:exon
so has part: feature:7128756-7131958:1:exon

position:7041395:1
position: 7041395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7041395-7041421:1:exon

position:7041421:1
position: 7041421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7057575-7058982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7065219-7065316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7067782-7067851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7071909-7072010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7074217-7074350:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7079183-7079321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7080579-7080791:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7087379-7087527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7088635-7088776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7091682-7091894:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7094059-7094265:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7095265-7095369:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7097900-7098052:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7100489-7100659:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7105521-7105682:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7106334-7106423:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7114634-7114717:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7115790-7115908:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7118964-7119072:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7121456-7121619:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7128756-7131958:1:exon

cgnb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cgnb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cingulin isoform X1
translation: MEECIEQSTVDRQGPVDYGVQIRFINDLQDTHKSKKAKKNVAKSGSYGVMVRVQGISGQPYVVLNNSDGVSPAPGAQYRTDYVKDGIPEESGSAVPGTYPENREDAKELDVPENPYGDTTSSRHPTGSDSQHSTSDEEAGSRHYVRLYDSEAYVRSSRNAGLYESVEGHMSLPRRRPAHPEEQLRKSCSQGSLLNMEEGPFPLELPPGKKVDQQTRSSAASTSSEQSVGSGRGKIQGYSNDLYLDEPRLNPPVSSSIGWSKSVSKASSAADMSSKSSDASAIDTKPLSSVDSLISKFDRSGGQQRGRTARRNRITASDQKRSQSLDSRMPVDRSSNRPELKKEPEWDEEFETPGGQKPFRSGDVMDVCKDVSYEKILEARPPLVTKESPPQTQFAPPVFSAVNRYTAGFPNKPAKEPDHFPTANASSLPKKWSQNQTEAEPIVERNRNTAVFTERTIQLKSTPDLLRDQQELSPASEELRKQLIFKILKEGSIESDSFLRKKASLVFDKFQSMKYAELSPDLQTLSSQNSDLEKKIAELQHKLDGELMNHKDGQRRIDMEDIQMQLEETKEERNQLHSLYQKNRKELQDNMQELMKLKMEKETMEAEMRDLQDEMAAMHKELRSSRKSTADSGDTEILSELTRTKEELDMVATAKQTMEDILRQKERELTALKGVLKEEVSSHDRAMEDLTAQYQKDMEQLRKNFDDVSQTQQNVESERQKINSMMRNLQKQLEESTEETVHWKEMFQKNREELRNTKQELLQIKLEKEEFDEELRDLRDRYSVMQDEVDHVKRTSVDSTEIQSLKKELATAKKELQEMAGNIEHQEALVQRKEQELSALKGTLNEEAASHSKALDKLKHSHQKEVDMLKRSCDLMSKDKLNLENEKGATEQAMKAADSSLKQLKQDNEDLKRKVSQMDFQMGECRDLIEELKCSESWLKDKVVRLEAERKQVELSLGEATEQEQEMAVAKRMLENRLEETQRNLNRLTQDHQELNERFQDEMRQKDQLRKAKNELEEQKRLLDKMIEKLQKEVDEVSKQSGNSVVMLQSQLDEYRDKSRRELTDHQRQAKERVLELEKANATIKRLQDEAGRLKQDLQQSNAEKENALLDKDLLGQRLQNLEQEMEAKRRTQDDKLRMVKVLEDKIKHLELELDEEKSSVDLLTERINRSRDQIEQLRGELMQERAARQDLECDKISLERQAKDLKVRLSNCEGSVKPNANLPQLESRIRELEDRLRSEERDRSALQASNRKLERKVKELTIQLDDERQQVSDEKDQLTLRVKALKRQVDEAEEEIERLETARKKGLRELEDLYEVNEQLQTRIKSLEKDVRLKKTRSNVGLQDDDISTDEEFDSNFEPSSITSLITESNLQTSSC
SIO_010081: cgnb
subclass of: SO_0000673
so part of: cgnb
location: join(7057609..7058982,7065219..7065316,7067782..7067851,7071909..7072010,7074217..7074350,7079183..7079321,7080579..7080791,7087379..7087527,7088635..7088776,7091682..7091894,7094059..7094265,7095265..7095369,7097900..7098052,7100489..7100659,7105521..7105682,7106334..7106423,7114634..7114717,7115790..7115908,7118964..7119072,7121456..7121619,7128756..7128891)
location: region:7057609-7128891:1
so has part: feature:7057609-7058982:1:exon
so has part: feature:7065219-7065316:1:exon
so has part: feature:7067782-7067851:1:exon
so has part: feature:7071909-7072010:1:exon
so has part: feature:7074217-7074350:1:exon
so has part: feature:7079183-7079321:1:exon
so has part: feature:7080579-7080791:1:exon
so has part: feature:7087379-7087527:1:exon
so has part: feature:7088635-7088776:1:exon
so has part: feature:7091682-7091894:1:exon
so has part: feature:7094059-7094265:1:exon
so has part: feature:7095265-7095369:1:exon
so has part: feature:7097900-7098052:1:exon
so has part: feature:7100489-7100659:1:exon
so has part: feature:7105521-7105682:1:exon
so has part: feature:7106334-7106423:1:exon
so has part: feature:7114634-7114717:1:exon
so has part: feature:7115790-7115908:1:exon
so has part: feature:7118964-7119072:1:exon
so has part: feature:7121456-7121619:1:exon
so has part: feature:7128756-7128891:1:exon

XP_048476315.1
type: Protein
SIO_000068: ncbiprotein

position:7057609:1
position: 7057609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7128891:1
position: 7128891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7057609-7058982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7065219-7065316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7067782-7067851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7071909-7072010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7074217-7074350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7079183-7079321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7080579-7080791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7087379-7087527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7088635-7088776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7091682-7091894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7094059-7094265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7095265-7095369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7097900-7098052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7100489-7100659:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7105521-7105682:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7106334-7106423:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7114634-7114717:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7115790-7115908:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7118964-7119072:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7121456-7121619:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7128756-7128891:1:exon

cgnb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cgnb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cingulin isoform X1
translation: MEECIEQSTVDRQGPVDYGVQIRFINDLQDTHKSKKAKKNVAKSGSYGVMVRVQGISGQPYVVLNNSDGVSPAPGAQYRTDYVKDGIPEESGSAVPGTYPENREDAKELDVPENPYGDTTSSRHPTGSDSQHSTSDEEAGSRHYVRLYDSEAYVRSSRNAGLYESVEGHMSLPRRRPAHPEEQLRKSCSQGSLLNMEEGPFPLELPPGKKVDQQTRSSAASTSSEQSVGSGRGKIQGYSNDLYLDEPRLNPPVSSSIGWSKSVSKASSAADMSSKSSDASAIDTKPLSSVDSLISKFDRSGGQQRGRTARRNRITASDQKRSQSLDSRMPVDRSSNRPELKKEPEWDEEFETPGGQKPFRSGDVMDVCKDVSYEKILEARPPLVTKESPPQTQFAPPVFSAVNRYTAGFPNKPAKEPDHFPTANASSLPKKWSQNQTEAEPIVERNRNTAVFTERTIQLKSTPDLLRDQQELSPASEELRKQLIFKILKEGSIESDSFLRKKASLVFDKFQSMKYAELSPDLQTLSSQNSDLEKKIAELQHKLDGELMNHKDGQRRIDMEDIQMQLEETKEERNQLHSLYQKNRKELQDNMQELMKLKMEKETMEAEMRDLQDEMAAMHKELRSSRKSTADSGDTEILSELTRTKEELDMVATAKQTMEDILRQKERELTALKGVLKEEVSSHDRAMEDLTAQYQKDMEQLRKNFDDVSQTQQNVESERQKINSMMRNLQKQLEESTEETVHWKEMFQKNREELRNTKQELLQIKLEKEEFDEELRDLRDRYSVMQDEVDHVKRTSVDSTEIQSLKKELATAKKELQEMAGNIEHQEALVQRKEQELSALKGTLNEEAASHSKALDKLKHSHQKEVDMLKRSCDLMSKDKLNLENEKGATEQAMKAADSSLKQLKQDNEDLKRKVSQMDFQMGECRDLIEELKCSESWLKDKVVRLEAERKQVELSLGEATEQEQEMAVAKRMLENRLEETQRNLNRLTQDHQELNERFQDEMRQKDQLRKAKNELEEQKRLLDKMIEKLQKEVDEVSKQSGNSVVMLQSQLDEYRDKSRRELTDHQRQAKERVLELEKANATIKRLQDEAGRLKQDLQQSNAEKENALLDKDLLGQRLQNLEQEMEAKRRTQDDKLRMVKVLEDKIKHLELELDEEKSSVDLLTERINRSRDQIEQLRGELMQERAARQDLECDKISLERQAKDLKVRLSNCEGSVKPNANLPQLESRIRELEDRLRSEERDRSALQASNRKLERKVKELTIQLDDERQQVSDEKDQLTLRVKALKRQVDEAEEEIERLETARKKGLRELEDLYEVNEQLQTRIKSLEKDVRLKKTRSNVGLQDDDISTDEEFDSNFEPSSITSLITESNLQTSSC
SIO_010081: cgnb
subclass of: SO_0000673
so part of: cgnb
location: join(7057609..7058982,7065219..7065316,7067782..7067851,7071909..7072010,7074217..7074350,7079183..7079321,7080579..7080791,7087379..7087527,7088635..7088776,7091682..7091894,7094059..7094265,7095265..7095369,7097900..7098052,7100489..7100659,7105521..7105682,7106334..7106423,7114634..7114717,7115790..7115908,7118964..7119072,7121456..7121619,7128756..7128891)
location: region:7057609-7128891:1
so has part: feature:7057609-7058982:1:exon
so has part: feature:7065219-7065316:1:exon
so has part: feature:7067782-7067851:1:exon
so has part: feature:7071909-7072010:1:exon
so has part: feature:7074217-7074350:1:exon
so has part: feature:7079183-7079321:1:exon
so has part: feature:7080579-7080791:1:exon
so has part: feature:7087379-7087527:1:exon
so has part: feature:7088635-7088776:1:exon
so has part: feature:7091682-7091894:1:exon
so has part: feature:7094059-7094265:1:exon
so has part: feature:7095265-7095369:1:exon
so has part: feature:7097900-7098052:1:exon
so has part: feature:7100489-7100659:1:exon
so has part: feature:7105521-7105682:1:exon
so has part: feature:7106334-7106423:1:exon
so has part: feature:7114634-7114717:1:exon
so has part: feature:7115790-7115908:1:exon
so has part: feature:7118964-7119072:1:exon
so has part: feature:7121456-7121619:1:exon
so has part: feature:7128756-7128891:1:exon

XP_048476316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7057609-7058982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7065219-7065316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7067782-7067851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7071909-7072010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7074217-7074350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7079183-7079321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7080579-7080791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7087379-7087527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7088635-7088776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7091682-7091894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7094059-7094265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7095265-7095369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7097900-7098052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7100489-7100659:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7105521-7105682:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7106334-7106423:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7114634-7114717:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7115790-7115908:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7118964-7119072:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7121456-7121619:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7128756-7128891:1:exon

cgnb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cgnb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cingulin isoform X1
translation: MEECIEQSTVDRQGPVDYGVQIRFINDLQDTHKSKKAKKNVAKSGSYGVMVRVQGISGQPYVVLNNSDGVSPAPGAQYRTDYVKDGIPEESGSAVPGTYPENREDAKELDVPENPYGDTTSSRHPTGSDSQHSTSDEEAGSRHYVRLYDSEAYVRSSRNAGLYESVEGHMSLPRRRPAHPEEQLRKSCSQGSLLNMEEGPFPLELPPGKKVDQQTRSSAASTSSEQSVGSGRGKIQGYSNDLYLDEPRLNPPVSSSIGWSKSVSKASSAADMSSKSSDASAIDTKPLSSVDSLISKFDRSGGQQRGRTARRNRITASDQKRSQSLDSRMPVDRSSNRPELKKEPEWDEEFETPGGQKPFRSGDVMDVCKDVSYEKILEARPPLVTKESPPQTQFAPPVFSAVNRYTAGFPNKPAKEPDHFPTANASSLPKKWSQNQTEAEPIVERNRNTAVFTERTIQLKSTPDLLRDQQELSPASEELRKQLIFKILKEGSIESDSFLRKKASLVFDKFQSMKYAELSPDLQTLSSQNSDLEKKIAELQHKLDGELMNHKDGQRRIDMEDIQMQLEETKEERNQLHSLYQKNRKELQDNMQELMKLKMEKETMEAEMRDLQDEMAAMHKELRSSRKSTADSGDTEILSELTRTKEELDMVATAKQTMEDILRQKERELTALKGVLKEEVSSHDRAMEDLTAQYQKDMEQLRKNFDDVSQTQQNVESERQKINSMMRNLQKQLEESTEETVHWKEMFQKNREELRNTKQELLQIKLEKEEFDEELRDLRDRYSVMQDEVDHVKRTSVDSTEIQSLKKELATAKKELQEMAGNIEHQEALVQRKEQELSALKGTLNEEAASHSKALDKLKHSHQKEVDMLKRSCDLMSKDKLNLENEKGATEQAMKAADSSLKQLKQDNEDLKRKVSQMDFQMGECRDLIEELKCSESWLKDKVVRLEAERKQVELSLGEATEQEQEMAVAKRMLENRLEETQRNLNRLTQDHQELNERFQDEMRQKDQLRKAKNELEEQKRLLDKMIEKLQKEVDEVSKQSGNSVVMLQSQLDEYRDKSRRELTDHQRQAKERVLELEKANATIKRLQDEAGRLKQDLQQSNAEKENALLDKDLLGQRLQNLEQEMEAKRRTQDDKLRMVKVLEDKIKHLELELDEEKSSVDLLTERINRSRDQIEQLRGELMQERAARQDLECDKISLERQAKDLKVRLSNCEGSVKPNANLPQLESRIRELEDRLRSEERDRSALQASNRKLERKVKELTIQLDDERQQVSDEKDQLTLRVKALKRQVDEAEEEIERLETARKKGLRELEDLYEVNEQLQTRIKSLEKDVRLKKTRSNVGLQDDDISTDEEFDSNFEPSSITSLITESNLQTSSC
SIO_010081: cgnb
subclass of: SO_0000673
so part of: cgnb
location: join(7057609..7058982,7065219..7065316,7067782..7067851,7071909..7072010,7074217..7074350,7079183..7079321,7080579..7080791,7087379..7087527,7088635..7088776,7091682..7091894,7094059..7094265,7095265..7095369,7097900..7098052,7100489..7100659,7105521..7105682,7106334..7106423,7114634..7114717,7115790..7115908,7118964..7119072,7121456..7121619,7128756..7128891)
location: region:7057609-7128891:1
so has part: feature:7057609-7058982:1:exon
so has part: feature:7065219-7065316:1:exon
so has part: feature:7067782-7067851:1:exon
so has part: feature:7071909-7072010:1:exon
so has part: feature:7074217-7074350:1:exon
so has part: feature:7079183-7079321:1:exon
so has part: feature:7080579-7080791:1:exon
so has part: feature:7087379-7087527:1:exon
so has part: feature:7088635-7088776:1:exon
so has part: feature:7091682-7091894:1:exon
so has part: feature:7094059-7094265:1:exon
so has part: feature:7095265-7095369:1:exon
so has part: feature:7097900-7098052:1:exon
so has part: feature:7100489-7100659:1:exon
so has part: feature:7105521-7105682:1:exon
so has part: feature:7106334-7106423:1:exon
so has part: feature:7114634-7114717:1:exon
so has part: feature:7115790-7115908:1:exon
so has part: feature:7118964-7119072:1:exon
so has part: feature:7121456-7121619:1:exon
so has part: feature:7128756-7128891:1:exon

XP_048476317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7057609-7058982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7065219-7065316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7067782-7067851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7071909-7072010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7074217-7074350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7079183-7079321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7080579-7080791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7087379-7087527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7088635-7088776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7091682-7091894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7094059-7094265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7095265-7095369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7097900-7098052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7100489-7100659:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7105521-7105682:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7106334-7106423:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7114634-7114717:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7115790-7115908:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7118964-7119072:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7121456-7121619:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7128756-7128891:1:exon

cgnb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cgnb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cingulin isoform X2
translation: MEECIEQSTVDRQGPVDYGVQIRFINDLQDTHKSKKAKKNVAKSGSYGVMVRVQGISGQPYVVLNNSDGVSPAPGAQYRTDYVKDGIPEESGSAVPGTYPENREDAKELDVPENPYGDTTSSRHPTGSDSQHSTSDEEAGSRHYVRLYDSEAYVRSSRNAGLYESVEGHMSLPRRRPAHPEEQLRKSCSQGSLLNMEEGPFPLELPPGKKVDQQTRSSAASTSSEQSVGSGRGKIQGYSNDLYLDEPRLNPPVSSSIGWSKSVSKASSAADMSSKSSDASAIDTKPLSSVDSLISKFDRSGGQQRGRTARRNRITASDQKRSQSLDSRMPVDRSSNRPELKKEPEWDEEFETPGGQKPFRSGDVMDVCKDVSYEKILEARPPLVTKESPPQTQFAPPVFSAVNRYTAGFPNKPAKEPDHFPTANASSLPKKWSQNQTEAEPIVERNRNTAVFTERTIQLKSTPDLLRDQQELSPASEELRKQLIFKILKEGSIESDSFLRKKASLVFDKFQSMKYAELSPDLQTLSSQNSDLEKKIAELQHKLDGELMNHKDGQRRIDMEDIQMQLEETKEERNQLHSLYQKNRKELQDNMQELMKLKMEKETMEAEMRDLQDEMAAMHKELRSSRKSTADSGDTEILSELTRTKEELDMVATAKQTMEDILRQKERELTALKGVLKEEVSSHDRAMEDLTAQYQKDMEQLRKNFDDVSQTQQNVESERQKINSMMRNLQKQLEESTEETVHWKEMFQKNREELRNTKQELLQIKLEKEEFDEELRDLRDRYSVMQDEVDHVKRTSVDSTEIQSLKKELATAKKELQEMAGNIEHQEALVQRKEQELSALKGTLNEEAASHSKALDKLKHSHQKEVDMLKRSCDLMSKDKLNLENEKGATEQAMKAADSSLKQLKQDNEDLKRKVSQMDFQMGECRDLIEELKCSESWLKDKVVRLEAERKQVELSLGEATEQEQEMAVAKRMLENRLEETQRNLNRLTQDHQELNERFQDEMRQKDQLRKAKNELEEQKRLLDKMIEKLQKEVDEVSKQSGNSVVMLQSQLDEYRDKSRRELTDHQRQAKERVLELEKANATIKRLQDEAGRLKQDLQQSNAEKENALLDKDLLGQRLQNLEQEMEAKRRTQDDKLRMVKVLEDKIKHLELELDEEKSSVDLLTERINRSRDQIEQLRGELMQERAARQDLECDKISLERQAKDLKVRLSNCEGSVKPNANLPQLESRIRELEDRLRSEERDRSALQASNRKLERKVKELTIQLDDERQQVSDEKDQLTLRVKALKRQVDEAEEEIERLETARKKGLRELEDLYEVNEQLQTRIKSLEKDVRQFHYK
SIO_010081: cgnb
subclass of: SO_0000673
so part of: cgnb
location: join(7057609..7058982,7065219..7065316,7067782..7067851,7071909..7072010,7074217..7074350,7079183..7079321,7080579..7080791,7087379..7087527,7088635..7088776,7091682..7091894,7094059..7094265,7095265..7095369,7097900..7098052,7100489..7100659,7105521..7105682,7106334..7106423,7114634..7114717,7115790..7115908,7118964..7119072,7121456..7121619,7125458..7125476)
location: region:7057609-7125476:1
so has part: feature:7057609-7058982:1:exon
so has part: feature:7065219-7065316:1:exon
so has part: feature:7067782-7067851:1:exon
so has part: feature:7071909-7072010:1:exon
so has part: feature:7074217-7074350:1:exon
so has part: feature:7079183-7079321:1:exon
so has part: feature:7080579-7080791:1:exon
so has part: feature:7087379-7087527:1:exon
so has part: feature:7088635-7088776:1:exon
so has part: feature:7091682-7091894:1:exon
so has part: feature:7094059-7094265:1:exon
so has part: feature:7095265-7095369:1:exon
so has part: feature:7097900-7098052:1:exon
so has part: feature:7100489-7100659:1:exon
so has part: feature:7105521-7105682:1:exon
so has part: feature:7106334-7106423:1:exon
so has part: feature:7114634-7114717:1:exon
so has part: feature:7115790-7115908:1:exon
so has part: feature:7118964-7119072:1:exon
so has part: feature:7121456-7121619:1:exon
so has part: feature:7125458-7125476:1:exon

XP_048476318.1
type: Protein
SIO_000068: ncbiprotein

position:7125476:1
position: 7125476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7057609-7058982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7065219-7065316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7067782-7067851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7071909-7072010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7074217-7074350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7079183-7079321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7080579-7080791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7087379-7087527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7088635-7088776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7091682-7091894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7094059-7094265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7095265-7095369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7097900-7098052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7100489-7100659:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7105521-7105682:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7106334-7106423:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7114634-7114717:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7115790-7115908:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7118964-7119072:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7121456-7121619:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7125458-7125476:1:exon

tuft1b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: tuft1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7152242..7160010
location: region:7152242-7160010:1
so has part: feature:7152242-7160010:1:exon
subclass of: SO_0000010

109938804
type: Gene
SIO_000068: ncbigene

position:7152242:1
position: 7152242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7160010:1
position: 7160010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7152242-7160010:1:exon

tuft1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tuft1b
product: tuftelin 1b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_048620370.1
SIO_010081: tuft1b
subclass of: SO_0000673
so part of: tuft1b
location: join(7152242..7152363,7152539..7152667,7154451..7154545,7155887..7155992,7156640..7156723,7157568..7157689,7159884..7160010)
location: region:7152242-7160010:1
so has part: feature:7152242-7152363:1:exon
so has part: feature:7152539-7152667:1:exon
so has part: feature:7154451-7154545:1:exon
so has part: feature:7155887-7155992:1:exon
so has part: feature:7156640-7156723:1:exon
so has part: feature:7157568-7157689:1:exon
so has part: feature:7159884-7160010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7152242-7152363:1:exon

position:7152363:1
position: 7152363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7152539-7152667:1:exon

position:7152539:1
position: 7152539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7152667:1
position: 7152667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7154451-7154545:1:exon

position:7154451:1
position: 7154451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7154545:1
position: 7154545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7155887-7155992:1:exon

position:7155887:1
position: 7155887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7155992:1
position: 7155992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7156640-7156723:1:exon

position:7156640:1
position: 7156640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7156723:1
position: 7156723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7157568-7157689:1:exon

position:7157568:1
position: 7157568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7157689:1
position: 7157689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7159884-7160010:1:exon

position:7159884:1
position: 7159884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tuft1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tuft1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tuftelin 1b
translation: MRRATKCLYSKLLETERTQERERKTLEDQIGEHRRQLGEARESLQRSEERVAERDRKIEELQRLTSGMEKEHQVLAGRISENEHQLEEMRAQNRTGRADQHRVLQLEKETENLREKISHLNDMLKSQQRKVRQMIEQMQSSRNQLEEKDLLIQELHERVEHLESENRAMQDRLEYMTCHEVKTQGVSPTSEQPNGRGSTDTQITPSARLPLGCKKPKALVRVLETS
SIO_010081: tuft1b
subclass of: SO_0000673
so part of: tuft1b
location: join(7152283..7152363,7152539..7152667,7154451..7154545,7155887..7155992,7156640..7156723,7157568..7157689,7159884..7159947)
location: region:7152283-7159947:1
so has part: feature:7152283-7152363:1:exon
so has part: feature:7152539-7152667:1:exon
so has part: feature:7154451-7154545:1:exon
so has part: feature:7155887-7155992:1:exon
so has part: feature:7156640-7156723:1:exon
so has part: feature:7157568-7157689:1:exon
so has part: feature:7159884-7159947:1:exon

XP_048476327.1
type: Protein
SIO_000068: ncbiprotein

position:7152283:1
position: 7152283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7159947:1
position: 7159947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7152283-7152363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7152539-7152667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7154451-7154545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7155887-7155992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7156640-7156723:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7157568-7157689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7159884-7159947:1:exon

c46h1orf43
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: c46h1orf43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7160691..7173104)
location: region:7160691-7173104:-1
so has part: feature:7160691-7173104:-1:exon
subclass of: SO_0000010

109926261
type: Gene
SIO_000068: ncbigene

position:7160691:-1
position: 7160691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7173104:-1
position: 7173104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7160691-7173104:-1:exon

c46h1orf43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: c46h1orf43
product: chromosome 46 C1orf43 homolog, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620369.1
SIO_010081: c46h1orf43
subclass of: SO_0000673
so part of: c46h1orf43
location: complement(join(7160691..7161919,7164831..7164889,7165685..7165851,7167441..7167494,7167996..7168113,7169026..7169127,7172987..7173104))
location: region:7160691-7173104:-1
so has part: feature:7172987-7173104:-1:exon
so has part: feature:7169026-7169127:-1:exon
so has part: feature:7167996-7168113:-1:exon
so has part: feature:7167441-7167494:-1:exon
so has part: feature:7165685-7165851:-1:exon
so has part: feature:7164831-7164889:-1:exon
so has part: feature:7160691-7161919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7172987-7173104:-1:exon

position:7172987:-1
position: 7172987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7169026-7169127:-1:exon

position:7169026:-1
position: 7169026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7169127:-1
position: 7169127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7167996-7168113:-1:exon

position:7167996:-1
position: 7167996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7168113:-1
position: 7168113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7167441-7167494:-1:exon

position:7167441:-1
position: 7167441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7167494:-1
position: 7167494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7165685-7165851:-1:exon

position:7165685:-1
position: 7165685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7165851:-1
position: 7165851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7164831-7164889:-1:exon

position:7164831:-1
position: 7164831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7164889:-1
position: 7164889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7160691-7161919:-1:exon

position:7161919:-1
position: 7161919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

c46h1orf43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: c46h1orf43
product: chromosome 46 C1orf43 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620366.1
SIO_010081: c46h1orf43
subclass of: SO_0000673
so part of: c46h1orf43
location: complement(join(7160691..7161919,7164831..7164889,7165685..7165851,7167441..7167494,7167996..7168113,7169026..7169127,7172237..7172755))
location: region:7160691-7172755:-1
so has part: feature:7172237-7172755:-1:exon
so has part: feature:7169026-7169127:-1:exon
so has part: feature:7167996-7168113:-1:exon
so has part: feature:7167441-7167494:-1:exon
so has part: feature:7165685-7165851:-1:exon
so has part: feature:7164831-7164889:-1:exon
so has part: feature:7160691-7161919:-1:exon

position:7172755:-1
position: 7172755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7172237-7172755:-1:exon

position:7172237:-1
position: 7172237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7169026-7169127:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7167996-7168113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7167441-7167494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7165685-7165851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7164831-7164889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7160691-7161919:-1:exon

c46h1orf43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: c46h1orf43
product: chromosome 46 C1orf43 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620367.1
SIO_010081: c46h1orf43
subclass of: SO_0000673
so part of: c46h1orf43
location: complement(join(7160691..7161919,7164831..7164889,7165685..7165851,7167441..7167494,7167996..7168113,7172237..7172691))
location: region:7160691-7172691:-1
so has part: feature:7172237-7172691:-1:exon
so has part: feature:7167996-7168113:-1:exon
so has part: feature:7167441-7167494:-1:exon
so has part: feature:7165685-7165851:-1:exon
so has part: feature:7164831-7164889:-1:exon
so has part: feature:7160691-7161919:-1:exon

position:7172691:-1
position: 7172691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7172237-7172691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7167996-7168113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7167441-7167494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7165685-7165851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7164831-7164889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7160691-7161919:-1:exon

c46h1orf43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: c46h1orf43
product: chromosome 46 C1orf43 homolog, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620368.1
SIO_010081: c46h1orf43
subclass of: SO_0000673
so part of: c46h1orf43
location: complement(join(7160691..7161919,7164831..7164889,7165685..7165851,7167441..7167494,7167996..7168113,7169026..7169127,7169711..7169837,7172237..7172684))
location: region:7160691-7172684:-1
so has part: feature:7172237-7172684:-1:exon
so has part: feature:7169711-7169837:-1:exon
so has part: feature:7169026-7169127:-1:exon
so has part: feature:7167996-7168113:-1:exon
so has part: feature:7167441-7167494:-1:exon
so has part: feature:7165685-7165851:-1:exon
so has part: feature:7164831-7164889:-1:exon
so has part: feature:7160691-7161919:-1:exon

position:7172684:-1
position: 7172684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7172237-7172684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7169711-7169837:-1:exon

position:7169711:-1
position: 7169711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7169837:-1
position: 7169837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7169026-7169127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7167996-7168113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7167441-7167494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7165685-7165851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7164831-7164889:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7160691-7161919:-1:exon

c46h1orf43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: c46h1orf43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C1orf43 homolog isoform X2
translation: MANAKSLSGVNVVLVMAYGSLDLREEIDRSLLKVQDLDYEPQLLDEGDIRLLQLQETGAQGPYNYIYRMKALDAIRHVDLPTGEGTDFVKYLTGKSFRNFLLELREGNTPFRGVRKNLIDKLIDGYESARHGTAFFGKAEYLKYQHAVNELAAILQSQNNRGPAQHQAAAKELTNPPESTSPSTIQVTYLPSNQKSKRPKHFLELKSFKDNYNTLESTL
SIO_010081: c46h1orf43
subclass of: SO_0000673
so part of: c46h1orf43
location: complement(join(7161721..7161919,7164831..7164889,7165685..7165851,7167441..7167494,7167996..7168113,7172237..7172299))
location: region:7161721-7172299:-1
so has part: feature:7172237-7172299:-1:exon
so has part: feature:7167996-7168113:-1:exon
so has part: feature:7167441-7167494:-1:exon
so has part: feature:7165685-7165851:-1:exon
so has part: feature:7164831-7164889:-1:exon
so has part: feature:7161721-7161919:-1:exon

XP_048476324.1
type: Protein
SIO_000068: ncbiprotein

position:7161721:-1
position: 7161721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7172299:-1
position: 7172299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7172237-7172299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7167996-7168113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7167441-7167494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7165685-7165851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7164831-7164889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7161721-7161919:-1:exon

c46h1orf43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: c46h1orf43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C1orf43 homolog isoform X1
translation: MANAKSLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRRGPHAPIGHNAPKDLREEIDRSLLKVQDLDYEPQLLDEGDIRLLQLQETGAQGPYNYIYRMKALDAIRHVDLPTGEGTDFVKYLTGKSFRNFLLELREGNTPFRGVRKNLIDKLIDGYESARHGTAFFGKAEYLKYQHAVNELAAILQSQNNRGPAQHQAAAKELTNPPESTSPSTIQVTYLPSNQKSKRPKHFLELKSFKDNYNTLESTL
SIO_010081: c46h1orf43
subclass of: SO_0000673
so part of: c46h1orf43
location: complement(join(7161721..7161919,7164831..7164889,7165685..7165851,7167441..7167494,7167996..7168113,7169026..7169127,7172237..7172299))
location: region:7161721-7172299:-1
so has part: feature:7172237-7172299:-1:exon
so has part: feature:7169026-7169127:-1:exon
so has part: feature:7167996-7168113:-1:exon
so has part: feature:7167441-7167494:-1:exon
so has part: feature:7165685-7165851:-1:exon
so has part: feature:7164831-7164889:-1:exon
so has part: feature:7161721-7161919:-1:exon

XP_048476323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7172237-7172299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7169026-7169127:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7167996-7168113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7167441-7167494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7165685-7165851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7164831-7164889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7161721-7161919:-1:exon

c46h1orf43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: c46h1orf43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C1orf43 homolog isoform X3
translation: MRFAMKSRRGPHAPIGHNAPKDLREEIDRSLLKVQDLDYEPQLLDEGDIRLLQLQETGAQGPYNYIYRMKALDAIRHVDLPTGEGTDFVKYLTGKSFRNFLLELREGNTPFRGVRKNLIDKLIDGYESARHGTAFFGKAEYLKYQHAVNELAAILQSQNNRGPAQHQAAAKELTNPPESTSPSTIQVTYLPSNQKSKRPKHFLELKSFKDNYNTLESTL
SIO_010081: c46h1orf43
subclass of: SO_0000673
so part of: c46h1orf43
location: complement(join(7161721..7161919,7164831..7164889,7165685..7165851,7167441..7167494,7167996..7168113,7169026..7169088))
location: region:7161721-7169088:-1
so has part: feature:7169026-7169088:-1:exon
so has part: feature:7167996-7168113:-1:exon
so has part: feature:7167441-7167494:-1:exon
so has part: feature:7165685-7165851:-1:exon
so has part: feature:7164831-7164889:-1:exon
so has part: feature:7161721-7161919:-1:exon

XP_048476325.1
type: Protein
SIO_000068: ncbiprotein

position:7169088:-1
position: 7169088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7169026-7169088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7167996-7168113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7167441-7167494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7165685-7165851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7164831-7164889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7161721-7161919:-1:exon

c46h1orf43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: c46h1orf43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C1orf43 homolog isoform X3
translation: MRFAMKSRRGPHAPIGHNAPKDLREEIDRSLLKVQDLDYEPQLLDEGDIRLLQLQETGAQGPYNYIYRMKALDAIRHVDLPTGEGTDFVKYLTGKSFRNFLLELREGNTPFRGVRKNLIDKLIDGYESARHGTAFFGKAEYLKYQHAVNELAAILQSQNNRGPAQHQAAAKELTNPPESTSPSTIQVTYLPSNQKSKRPKHFLELKSFKDNYNTLESTL
SIO_010081: c46h1orf43
subclass of: SO_0000673
so part of: c46h1orf43
location: complement(join(7161721..7161919,7164831..7164889,7165685..7165851,7167441..7167494,7167996..7168113,7169026..7169088))
location: region:7161721-7169088:-1
so has part: feature:7169026-7169088:-1:exon
so has part: feature:7167996-7168113:-1:exon
so has part: feature:7167441-7167494:-1:exon
so has part: feature:7165685-7165851:-1:exon
so has part: feature:7164831-7164889:-1:exon
so has part: feature:7161721-7161919:-1:exon

XP_048476326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7169026-7169088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7167996-7168113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7167441-7167494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7165685-7165851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7164831-7164889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7161721-7161919:-1:exon

ubap2l
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ubap2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7185887..7235492
location: region:7185887-7235492:1
so has part: feature:7185887-7235492:1:exon
subclass of: SO_0000010

109922598
type: Gene
SIO_000068: ncbigene

position:7185887:1
position: 7185887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7235492:1
position: 7235492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7185887-7235492:1:exon

ubap2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ubap2l
product: ubiquitin associated protein 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_048620371.1
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185887..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7202296..7202355,7204419..7204471,7205702..7205776,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227319..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235492)
location: region:7185887-7235492:1
so has part: feature:7185887-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7202296-7202355:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7205702-7205776:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
so has part: feature:7218106-7218280:1:exon
so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
so has part: feature:7227319-7227372:1:exon
so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7185887-7186029:1:exon

position:7186029:1
position: 7186029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

position:7190296:1
position: 7190296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7190373:1
position: 7190373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

position:7191400:1
position: 7191400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7191510:1
position: 7191510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

position:7192279:1
position: 7192279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7192447:1
position: 7192447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

position:7194636:1
position: 7194636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7194731:1
position: 7194731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

position:7195230:1
position: 7195230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7195272:1
position: 7195272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

position:7199989:1
position: 7199989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7200098:1
position: 7200098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7202296-7202355:1:exon

position:7202296:1
position: 7202296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7202355:1
position: 7202355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7204419-7204471:1:exon

position:7204419:1
position: 7204419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7204471:1
position: 7204471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7205702-7205776:1:exon

position:7205702:1
position: 7205702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7205776:1
position: 7205776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7208175-7208260:1:exon

position:7208175:1
position: 7208175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7208260:1
position: 7208260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7209076-7209247:1:exon

position:7209076:1
position: 7209076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7209247:1
position: 7209247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7209882-7210080:1:exon

position:7209882:1
position: 7209882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7210080:1
position: 7210080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7211012-7211259:1:exon

position:7211012:1
position: 7211012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7211259:1
position: 7211259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7215097-7215269:1:exon

position:7215097:1
position: 7215097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7215269:1
position: 7215269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7216372-7216564:1:exon

position:7216372:1
position: 7216372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7216564:1
position: 7216564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7217109-7217148:1:exon

position:7217109:1
position: 7217109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7217148:1
position: 7217148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7218106-7218280:1:exon

position:7218106:1
position: 7218106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7218280:1
position: 7218280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7219670-7219739:1:exon

position:7219670:1
position: 7219670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7219739:1
position: 7219739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7223203-7223395:1:exon

position:7223203:1
position: 7223203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7223395:1
position: 7223395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7226647-7226735:1:exon

position:7226647:1
position: 7226647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7226735:1
position: 7226735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7227319-7227372:1:exon

position:7227319:1
position: 7227319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7227372:1
position: 7227372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7228027-7228108:1:exon

position:7228027:1
position: 7228027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7228108:1
position: 7228108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7228313-7228530:1:exon

position:7228313:1
position: 7228313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7228530:1
position: 7228530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7231546-7231645:1:exon

position:7231546:1
position: 7231546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7231645:1
position: 7231645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7233010-7233083:1:exon

position:7233010:1
position: 7233010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7233083:1
position: 7233083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7234245-7234433:1:exon

position:7234245:1
position: 7234245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7234433:1
position: 7234433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7235295-7235492:1:exon

position:7235295:1
position: 7235295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ubap2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ubap2l
product: ubiquitin associated protein 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_048620372.1
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185887..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7202296..7202355,7204419..7204471,7205702..7205776,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227325..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235492)
location: region:7185887-7235492:1
so has part: feature:7185887-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7202296-7202355:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7205702-7205776:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
so has part: feature:7218106-7218280:1:exon
so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
so has part: feature:7227325-7227372:1:exon
so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7185887-7186029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7202296-7202355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7204419-7204471:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7205702-7205776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7208175-7208260:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7209076-7209247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7209882-7210080:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7211012-7211259:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7215097-7215269:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7216372-7216564:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7217109-7217148:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7218106-7218280:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7219670-7219739:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7223203-7223395:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7226647-7226735:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7227325-7227372:1:exon

position:7227325:1
position: 7227325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7228027-7228108:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7228313-7228530:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7231546-7231645:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7233010-7233083:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7234245-7234433:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7235295-7235492:1:exon

ubap2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ubap2l
product: ubiquitin associated protein 2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048620374.1
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185887..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7202296..7202355,7204419..7204471,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227319..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235492)
location: region:7185887-7235492:1
so has part: feature:7185887-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7202296-7202355:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
so has part: feature:7218106-7218280:1:exon
so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
so has part: feature:7227319-7227372:1:exon
so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7185887-7186029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7202296-7202355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7204419-7204471:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7208175-7208260:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7209076-7209247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7209882-7210080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7211012-7211259:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7215097-7215269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7216372-7216564:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7217109-7217148:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7218106-7218280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7219670-7219739:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7223203-7223395:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7226647-7226735:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7227319-7227372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7228027-7228108:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7228313-7228530:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7231546-7231645:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7233010-7233083:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7234245-7234433:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7235295-7235492:1:exon

ubap2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ubap2l
product: ubiquitin associated protein 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_048620373.1
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185887..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7204419..7204471,7205702..7205776,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227319..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235492)
location: region:7185887-7235492:1
so has part: feature:7185887-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7205702-7205776:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
so has part: feature:7218106-7218280:1:exon
so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
so has part: feature:7227319-7227372:1:exon
so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7185887-7186029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7204419-7204471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7205702-7205776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7208175-7208260:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7209076-7209247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7209882-7210080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7211012-7211259:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7215097-7215269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7216372-7216564:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7217109-7217148:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7218106-7218280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7219670-7219739:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7223203-7223395:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7226647-7226735:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7227319-7227372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7228027-7228108:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7228313-7228530:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7231546-7231645:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7233010-7233083:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7234245-7234433:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7235295-7235492:1:exon

ubap2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ubap2l
product: ubiquitin associated protein 2-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048620375.1
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185887..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7204419..7204471,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227319..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235492)
location: region:7185887-7235492:1
so has part: feature:7185887-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
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so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
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so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7185887-7186029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7204419-7204471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7208175-7208260:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7209076-7209247:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7209882-7210080:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7211012-7211259:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7215097-7215269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7216372-7216564:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7217109-7217148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7218106-7218280:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7219670-7219739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7223203-7223395:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7226647-7226735:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7227319-7227372:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7228027-7228108:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7228313-7228530:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7231546-7231645:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7233010-7233083:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7234245-7234433:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7235295-7235492:1:exon

ubap2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ubap2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X1
translation: MMTSVGTNRARGNWDQTQTQNQTQQKQRPQATAEQIRIAQMISDHNDADFEEKVKQLIDITGKNQDECMIALHDCNGDVNRAINVLLEGNPDTDSWEMVGKKKSLAGPKETSLVEASEENKEMRDRDREFSRRRVGGGRRGRGASRGREFRGQENGLDGAKSSGTFSRASERGRRGRGRGRGLGRRGGRFSAQGMGTFNPADYTDPASTDEYYGNPNPTWNSASSFEPDDGTRLQFSGGDGANGPRKFETVPGAWRTVTEEWGTDDWSEDPAPGTTFLNPDDKRNPPKAVNGCYQLSETKIFTASNVGPLPSGNETLTITAGQRIDLAVLLGKQPSVSENEPAPLDTSASPTLSQPLVFNNSKQHPVSQPSPPTTFPQHNMVSMLSKNFGDVGEPKGGSTAGSQLLEQLKTAQALAQLAAQHTQPTSNAASSWDMGPTSQPSALSHFELKSQTESSVHSAFSQRQSYSNSSMMEVFIPSKQPTAAPNSPLQSKAGTTQASPGASENQSSSPQPAQQKLKPQKKKASIASKIPSSAVEMPASADIAGLNLQFGALQFGSEPMLSEYEATPTTSVPVSQPQSSPYTSAVSESSSSTIPSNQSQESGYQPSTITTSAFTTQNSAPGPQYEQSSNQRAAYSNSLSSSPQKDLTQAKNGFSTIQTSQSIEAAAGSAVKSDSPAVPSMASLSNAVSASSLLTSNSQHPSGLASLSHTEELPSTTTPQQSSTASTQQSSSLSSSSGRSSTSTHLHTSVESEACLHSSPSTFATAASTVSVAPSSSVSNTLGSVSSLNLSLVSNSTVTAASRSSVATTSGKAPPNLPPGVPPLLPNPYIVAPGLLPAYQPQVYGYDDLQMLQTRFPLDYYGIPFAAPTTPITGREASLTNNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQSHHTTQQTFLNPALPPGYSYTSLPYYAGVPGLPNTFQYGPAMFAVPPPSSKQHGVNVNAPATAFQQASGYGTHGYSTAGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSAGPVNPATAAGYPPPFMHILAPHQQQMHSQILHLQQDGQSGTGQRTQTSSIQQKSQGNKSAYNSSGYWGPN
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185940..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7202296..7202355,7204419..7204471,7205702..7205776,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227319..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235393)
location: region:7185940-7235393:1
so has part: feature:7185940-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7202296-7202355:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7205702-7205776:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
so has part: feature:7218106-7218280:1:exon
so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
so has part: feature:7227319-7227372:1:exon
so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235393:1:exon

XP_048476328.1
type: Protein
SIO_000068: ncbiprotein

position:7185940:1
position: 7185940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7235393:1
position: 7235393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7185940-7186029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7202296-7202355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7204419-7204471:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7205702-7205776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7208175-7208260:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7209076-7209247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7209882-7210080:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7211012-7211259:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7215097-7215269:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7216372-7216564:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7217109-7217148:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7218106-7218280:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7219670-7219739:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7223203-7223395:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7226647-7226735:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7227319-7227372:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7228027-7228108:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7228313-7228530:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7231546-7231645:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7233010-7233083:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7234245-7234433:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7235295-7235393:1:exon

ubap2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ubap2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X2
translation: MMTSVGTNRARGNWDQTQTQNQTQQKQRPQATAEQIRIAQMISDHNDADFEEKVKQLIDITGKNQDECMIALHDCNGDVNRAINVLLEGNPDTDSWEMVGKKKSLAGPKETSLVEASEENKEMRDRDREFSRRRVGGGRRGRGASRGREFRGQENGLDGAKSSGTFSRASERGRRGRGRGRGLGRRGGRFSAQGMGTFNPADYTDPASTDEYYGNPNPTWNSASSFEPDDGTRLQFSGGDGANGPRKFETVPGAWRTVTEEWGTDDWSEDPAPGTTFLNPDDKRNPPKAVNGCYQLSETKIFTASNVGPLPSGNETLTITAGQRIDLAVLLGKQPSVSENEPAPLDTSASPTLSQPLVFNNSKQHPVSQPSPPTTFPQHNMVSMLSKNFGDVGEPKGGSTAGSQLLEQLKTAQALAQLAAQHTQPTSNAASSWDMGPTSQPSALSHFELKSQTESSVHSAFSQRQSYSNSSMMEVFIPSKQPTAAPNSPLQSKAGTTQASPGASENQSSSPQPAQQKLKPQKKKASIASKIPSSAVEMPASADIAGLNLQFGALQFGSEPMLSEYEATPTTSVPVSQPQSSPYTSAVSESSSSTIPSNQSQESGYQPSTITTSAFTTQNSAPGPQYEQSSNQRAAYSNSLSSSPQKDLTQAKNGFSTIQTSQSIEAAAGSAVKSDSPAVPSMASLSNAVSASSLLTSNSQHPSGLASLSHTEELPSTTTPQQSSTASTQQSSSLSSSSGRSSTSTHLHTSVESEACLHSSPSTFATAASTVSVAPSSSVSNTLGSVSSLNLSLVSNSTVTAASRSSVATTSGKAPPNLPPGVPPLLPNPYIVAPGLLPAYQVYGYDDLQMLQTRFPLDYYGIPFAAPTTPITGREASLTNNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQSHHTTQQTFLNPALPPGYSYTSLPYYAGVPGLPNTFQYGPAMFAVPPPSSKQHGVNVNAPATAFQQASGYGTHGYSTAGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSAGPVNPATAAGYPPPFMHILAPHQQQMHSQILHLQQDGQSGTGQRTQTSSIQQKSQGNKSAYNSSGYWGPN
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185940..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7202296..7202355,7204419..7204471,7205702..7205776,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227325..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235393)
location: region:7185940-7235393:1
so has part: feature:7185940-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7202296-7202355:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7205702-7205776:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
so has part: feature:7218106-7218280:1:exon
so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
so has part: feature:7227325-7227372:1:exon
so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235393:1:exon

XP_048476329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7185940-7186029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7202296-7202355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7204419-7204471:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7205702-7205776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7208175-7208260:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7209076-7209247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7209882-7210080:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7211012-7211259:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7215097-7215269:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7216372-7216564:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7217109-7217148:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7218106-7218280:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7219670-7219739:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7223203-7223395:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7226647-7226735:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7227325-7227372:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7228027-7228108:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7228313-7228530:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7231546-7231645:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7233010-7233083:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7234245-7234433:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7235295-7235393:1:exon

ubap2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ubap2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X4
translation: MMTSVGTNRARGNWDQTQTQNQTQQKQRPQATAEQIRIAQMISDHNDADFEEKVKQLIDITGKNQDECMIALHDCNGDVNRAINVLLEGNPDTDSWEMVGKKKSLAGPKETSLVEASEENKEMRDRDREFSRRRVGGGRRGRGASRGREFRGQENGLDGAKSSGTFSRASERGRRGRGRGRGLGRRGGRFSAQGMGTFNPADYTDPASTDEYYGNPNPTWNSASSFEPDDGTRLQFSGGDGANGPRKFETVPGAWRTVTEEWGTDDWSEDLSETKIFTASNVGPLPSGNETLTITAGQRIDLAVLLGKQPSVSENEPAPLDTSASPTLSQPLVFNNSKQHPVSQPSPPTTFPQHNMVSMLSKNFGDVGEPKGGSTAGSQLLEQLKTAQALAQLAAQHTQPTSNAASSWDMGPTSQPSALSHFELKSQTESSVHSAFSQRQSYSNSSMMEVFIPSKQPTAAPNSPLQSKAGTTQASPGASENQSSSPQPAQQKLKPQKKKASIASKIPSSAVEMPASADIAGLNLQFGALQFGSEPMLSEYEATPTTSVPVSQPQSSPYTSAVSESSSSTIPSNQSQESGYQPSTITTSAFTTQNSAPGPQYEQSSNQRAAYSNSLSSSPQKDLTQAKNGFSTIQTSQSIEAAAGSAVKSDSPAVPSMASLSNAVSASSLLTSNSQHPSGLASLSHTEELPSTTTPQQSSTASTQQSSSLSSSSGRSSTSTHLHTSVESEACLHSSPSTFATAASTVSVAPSSSVSNTLGSVSSLNLSLVSNSTVTAASRSSVATTSGKAPPNLPPGVPPLLPNPYIVAPGLLPAYQPQVYGYDDLQMLQTRFPLDYYGIPFAAPTTPITGREASLTNNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQSHHTTQQTFLNPALPPGYSYTSLPYYAGVPGLPNTFQYGPAMFAVPPPSSKQHGVNVNAPATAFQQASGYGTHGYSTAGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSAGPVNPATAAGYPPPFMHILAPHQQQMHSQILHLQQDGQSGTGQRTQTSSIQQKSQGNKSAYNSSGYWGPN
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185940..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7202296..7202355,7204419..7204471,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227319..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235393)
location: region:7185940-7235393:1
so has part: feature:7185940-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7202296-7202355:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
so has part: feature:7218106-7218280:1:exon
so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
so has part: feature:7227319-7227372:1:exon
so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235393:1:exon

XP_048476331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7185940-7186029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7202296-7202355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7204419-7204471:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7208175-7208260:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7209076-7209247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7209882-7210080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7211012-7211259:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7215097-7215269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7216372-7216564:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7217109-7217148:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7218106-7218280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7219670-7219739:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7223203-7223395:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7226647-7226735:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7227319-7227372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7228027-7228108:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7228313-7228530:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7231546-7231645:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7233010-7233083:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7234245-7234433:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7235295-7235393:1:exon

ubap2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ubap2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X3
translation: MMTSVGTNRARGNWDQTQTQNQTQQKQRPQATAEQIRIAQMISDHNDADFEEKVKQLIDITGKNQDECMIALHDCNGDVNRAINVLLEGNPDTDSWEMVGKKKSLAGPKETSLVEASEENKEMRDRDREFSRRRVGGGRRGRGASRGREFRGQENGLDGAKSSGTFSRASERGRRGRGRGRGLGRRGGRFSAQGMGTFNPADYTDPASTDEYYGNPNPTWNSASSFEPDDGTSAWRTVTEEWGTDDWSEDPAPGTTFLNPDDKRNPPKAVNGCYQLSETKIFTASNVGPLPSGNETLTITAGQRIDLAVLLGKQPSVSENEPAPLDTSASPTLSQPLVFNNSKQHPVSQPSPPTTFPQHNMVSMLSKNFGDVGEPKGGSTAGSQLLEQLKTAQALAQLAAQHTQPTSNAASSWDMGPTSQPSALSHFELKSQTESSVHSAFSQRQSYSNSSMMEVFIPSKQPTAAPNSPLQSKAGTTQASPGASENQSSSPQPAQQKLKPQKKKASIASKIPSSAVEMPASADIAGLNLQFGALQFGSEPMLSEYEATPTTSVPVSQPQSSPYTSAVSESSSSTIPSNQSQESGYQPSTITTSAFTTQNSAPGPQYEQSSNQRAAYSNSLSSSPQKDLTQAKNGFSTIQTSQSIEAAAGSAVKSDSPAVPSMASLSNAVSASSLLTSNSQHPSGLASLSHTEELPSTTTPQQSSTASTQQSSSLSSSSGRSSTSTHLHTSVESEACLHSSPSTFATAASTVSVAPSSSVSNTLGSVSSLNLSLVSNSTVTAASRSSVATTSGKAPPNLPPGVPPLLPNPYIVAPGLLPAYQPQVYGYDDLQMLQTRFPLDYYGIPFAAPTTPITGREASLTNNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQSHHTTQQTFLNPALPPGYSYTSLPYYAGVPGLPNTFQYGPAMFAVPPPSSKQHGVNVNAPATAFQQASGYGTHGYSTAGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSAGPVNPATAAGYPPPFMHILAPHQQQMHSQILHLQQDGQSGTGQRTQTSSIQQKSQGNKSAYNSSGYWGPN
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185940..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7204419..7204471,7205702..7205776,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227319..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235393)
location: region:7185940-7235393:1
so has part: feature:7185940-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7205702-7205776:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
so has part: feature:7218106-7218280:1:exon
so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
so has part: feature:7227319-7227372:1:exon
so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235393:1:exon

XP_048476330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7185940-7186029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7204419-7204471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7205702-7205776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7208175-7208260:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7209076-7209247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7209882-7210080:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7211012-7211259:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7215097-7215269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7216372-7216564:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7217109-7217148:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7218106-7218280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7219670-7219739:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7223203-7223395:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7226647-7226735:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7227319-7227372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7228027-7228108:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7228313-7228530:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7231546-7231645:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7233010-7233083:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7234245-7234433:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7235295-7235393:1:exon

ubap2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ubap2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X5
translation: MMTSVGTNRARGNWDQTQTQNQTQQKQRPQATAEQIRIAQMISDHNDADFEEKVKQLIDITGKNQDECMIALHDCNGDVNRAINVLLEGNPDTDSWEMVGKKKSLAGPKETSLVEASEENKEMRDRDREFSRRRVGGGRRGRGASRGREFRGQENGLDGAKSSGTFSRASERGRRGRGRGRGLGRRGGRFSAQGMGTFNPADYTDPASTDEYYGNPNPTWNSASSFEPDDGTSAWRTVTEEWGTDDWSEDLSETKIFTASNVGPLPSGNETLTITAGQRIDLAVLLGKQPSVSENEPAPLDTSASPTLSQPLVFNNSKQHPVSQPSPPTTFPQHNMVSMLSKNFGDVGEPKGGSTAGSQLLEQLKTAQALAQLAAQHTQPTSNAASSWDMGPTSQPSALSHFELKSQTESSVHSAFSQRQSYSNSSMMEVFIPSKQPTAAPNSPLQSKAGTTQASPGASENQSSSPQPAQQKLKPQKKKASIASKIPSSAVEMPASADIAGLNLQFGALQFGSEPMLSEYEATPTTSVPVSQPQSSPYTSAVSESSSSTIPSNQSQESGYQPSTITTSAFTTQNSAPGPQYEQSSNQRAAYSNSLSSSPQKDLTQAKNGFSTIQTSQSIEAAAGSAVKSDSPAVPSMASLSNAVSASSLLTSNSQHPSGLASLSHTEELPSTTTPQQSSTASTQQSSSLSSSSGRSSTSTHLHTSVESEACLHSSPSTFATAASTVSVAPSSSVSNTLGSVSSLNLSLVSNSTVTAASRSSVATTSGKAPPNLPPGVPPLLPNPYIVAPGLLPAYQPQVYGYDDLQMLQTRFPLDYYGIPFAAPTTPITGREASLTNNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQSHHTTQQTFLNPALPPGYSYTSLPYYAGVPGLPNTFQYGPAMFAVPPPSSKQHGVNVNAPATAFQQASGYGTHGYSTAGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSAGPVNPATAAGYPPPFMHILAPHQQQMHSQILHLQQDGQSGTGQRTQTSSIQQKSQGNKSAYNSSGYWGPN
SIO_010081: ubap2l
subclass of: SO_0000673
so part of: ubap2l
location: join(7185940..7186029,7190296..7190373,7191400..7191510,7192279..7192447,7194636..7194731,7195230..7195272,7199989..7200098,7204419..7204471,7208175..7208260,7209076..7209247,7209882..7210080,7211012..7211259,7215097..7215269,7216372..7216564,7217109..7217148,7218106..7218280,7219670..7219739,7223203..7223395,7226647..7226735,7227319..7227372,7228027..7228108,7228313..7228530,7231546..7231645,7233010..7233083,7234245..7234433,7235295..7235393)
location: region:7185940-7235393:1
so has part: feature:7185940-7186029:1:exon
so has part: feature:7190296-7190373:1:exon
so has part: feature:7191400-7191510:1:exon
so has part: feature:7192279-7192447:1:exon
so has part: feature:7194636-7194731:1:exon
so has part: feature:7195230-7195272:1:exon
so has part: feature:7199989-7200098:1:exon
so has part: feature:7204419-7204471:1:exon
so has part: feature:7208175-7208260:1:exon
so has part: feature:7209076-7209247:1:exon
so has part: feature:7209882-7210080:1:exon
so has part: feature:7211012-7211259:1:exon
so has part: feature:7215097-7215269:1:exon
so has part: feature:7216372-7216564:1:exon
so has part: feature:7217109-7217148:1:exon
so has part: feature:7218106-7218280:1:exon
so has part: feature:7219670-7219739:1:exon
so has part: feature:7223203-7223395:1:exon
so has part: feature:7226647-7226735:1:exon
so has part: feature:7227319-7227372:1:exon
so has part: feature:7228027-7228108:1:exon
so has part: feature:7228313-7228530:1:exon
so has part: feature:7231546-7231645:1:exon
so has part: feature:7233010-7233083:1:exon
so has part: feature:7234245-7234433:1:exon
so has part: feature:7235295-7235393:1:exon

XP_048476332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7185940-7186029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190296-7190373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7191400-7191510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7192279-7192447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7194636-7194731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7195230-7195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7199989-7200098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7204419-7204471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7208175-7208260:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7209076-7209247:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7209882-7210080:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7211012-7211259:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7215097-7215269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7216372-7216564:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7217109-7217148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7218106-7218280:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7219670-7219739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7223203-7223395:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7226647-7226735:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7227319-7227372:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7228027-7228108:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7228313-7228530:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7231546-7231645:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7233010-7233083:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7234245-7234433:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7235295-7235393:1:exon

LOC125487875
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7226613..7244555)
location: region:7226613-7244555:-1
so has part: feature:7226613-7244555:-1:exon
subclass of: SO_0000011

125487875
type: Gene
SIO_000068: ncbigene

position:7226613:-1
position: 7226613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7244555:-1
position: 7244555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7226613-7244555:-1:exon

LOC125487875
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487875
product: uncharacterized LOC125487875
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007266134.1
SIO_010081: LOC125487875
subclass of: SO_0000673
so part of: LOC125487875
location: complement(join(7226613..7227418,7243974..7244555))
location: region:7226613-7244555:-1
so has part: feature:7243974-7244555:-1:exon
so has part: feature:7226613-7227418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7243974-7244555:-1:exon

position:7243974:-1
position: 7243974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7226613-7227418:-1:exon

position:7227418:-1
position: 7227418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926611
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7256578..7264837
location: region:7256578-7264837:1
so has part: feature:7256578-7264837:1:exon
subclass of: SO_0000011

109926611
type: Gene
SIO_000068: ncbigene

position:7256578:1
position: 7256578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7264837:1
position: 7264837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7256578-7264837:1:exon

LOC109926611
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109926611
product: uncharacterized LOC109926611
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007266135.1
SIO_010081: LOC109926611
subclass of: SO_0000673
so part of: LOC109926611
location: join(7256578..7256992,7259438..7259563,7261227..7264837)
location: region:7256578-7264837:1
so has part: feature:7256578-7256992:1:exon
so has part: feature:7259438-7259563:1:exon
so has part: feature:7261227-7264837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7256578-7256992:1:exon

position:7256992:1
position: 7256992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7259438-7259563:1:exon

position:7259438:1
position: 7259438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7259563:1
position: 7259563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7261227-7264837:1:exon

position:7261227:1
position: 7261227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hax1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: hax1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7265486..7276933
location: region:7265486-7276933:1
so has part: feature:7265486-7276933:1:exon
subclass of: SO_0000010

109926612
type: Gene
SIO_000068: ncbigene

position:7265486:1
position: 7265486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7276933:1
position: 7276933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7265486-7276933:1:exon

hax1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hax1
product: HCLS1 associated protein X-1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620295.1
SIO_010081: hax1
subclass of: SO_0000673
so part of: hax1
location: join(7265486..7266612,7269291..7269508,7269850..7270308,7270668..7270783,7275239..7275392,7276331..7276933)
location: region:7265486-7276933:1
so has part: feature:7265486-7266612:1:exon
so has part: feature:7269291-7269508:1:exon
so has part: feature:7269850-7270308:1:exon
so has part: feature:7270668-7270783:1:exon
so has part: feature:7275239-7275392:1:exon
so has part: feature:7276331-7276933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7265486-7266612:1:exon

position:7266612:1
position: 7266612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7269291-7269508:1:exon

position:7269291:1
position: 7269291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7269508:1
position: 7269508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7269850-7270308:1:exon

position:7269850:1
position: 7269850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7270308:1
position: 7270308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7270668-7270783:1:exon

position:7270668:1
position: 7270668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7270783:1
position: 7270783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7275239-7275392:1:exon

position:7275239:1
position: 7275239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7275392:1
position: 7275392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7276331-7276933:1:exon

position:7276331:1
position: 7276331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hax1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hax1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HCLS1-associated protein X-1
translation: MERKRGRKKLLVWKLPAALSGQGMVGGGGRRILVGVTFNCSATARFYFTARSRGDGAIWFTARGRVWDPNPLYGRRSGGGDNPLYGRRSKPASPFTLRLEVGRRGQSTLRQEVEWDGGAAMSLFGLFRGFFGFPERGDGRGDRFFQGMTLDDEDEDEDEDEDDGFFGARPGDTFSFGFRPGGRNFDDGFSGLFHEMDELFKGIGSWEVPSGQFDLPVLEPHPYGGGRQEWSRRSPRDLMLKEPEKDRPEGSGEQPDGDRRDRLTPEGSRRGPLTPYRRPWNPPNTVRPTSLLTQDQEEAIQTHQAIPATRLGYNLAPLTRFGSLPLNPPAPANEIPSACFPNLLRNSPAPCTLNSAFEGKGFHPLVYLDSRVNSEGLDKILKPSEPQTRSYFKSVSVSKVVLPDGSVEERRVTRDGEGNEETTVTRAHGEQSYTTVTRRDAQGKEERTEEMVNMDDSERQRFTEHWEHRPGKDTPSELQTFGDSLSFLDKLLKGIFSR
SIO_010081: hax1
subclass of: SO_0000673
so part of: hax1
location: join(7266191..7266612,7269291..7269508,7269850..7270308,7270668..7270783,7275239..7275392,7276331..7276458)
location: region:7266191-7276458:1
so has part: feature:7266191-7266612:1:exon
so has part: feature:7269291-7269508:1:exon
so has part: feature:7269850-7270308:1:exon
so has part: feature:7270668-7270783:1:exon
so has part: feature:7275239-7275392:1:exon
so has part: feature:7276331-7276458:1:exon

XP_048476252.1
type: Protein
SIO_000068: ncbiprotein

position:7266191:1
position: 7266191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7276458:1
position: 7276458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7266191-7266612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7269291-7269508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7269850-7270308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7270668-7270783:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7275239-7275392:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7276331-7276458:1:exon

LOC109925547
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925547
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7281941..7301871
location: region:7281941-7301871:1
so has part: feature:7281941-7301871:1:exon
subclass of: SO_0000010

109925547
type: Gene
SIO_000068: ncbigene

position:7281941:1
position: 7281941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7301871:1
position: 7301871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7281941-7301871:1:exon

LOC109925547
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925547
product: annexin A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048620377.1
SIO_010081: LOC109925547
subclass of: SO_0000673
so part of: LOC109925547
location: join(7281941..7282049,7285154..7285207,7289040..7289134,7289808..7289921,7291145..7291235,7293237..7293316,7294002..7294061,7294912..7295005,7295808..7295903,7296593..7296651,7298256..7298378,7301456..7301871)
location: region:7281941-7301871:1
so has part: feature:7281941-7282049:1:exon
so has part: feature:7285154-7285207:1:exon
so has part: feature:7289040-7289134:1:exon
so has part: feature:7289808-7289921:1:exon
so has part: feature:7291145-7291235:1:exon
so has part: feature:7293237-7293316:1:exon
so has part: feature:7294002-7294061:1:exon
so has part: feature:7294912-7295005:1:exon
so has part: feature:7295808-7295903:1:exon
so has part: feature:7296593-7296651:1:exon
so has part: feature:7298256-7298378:1:exon
so has part: feature:7301456-7301871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7281941-7282049:1:exon

position:7282049:1
position: 7282049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7285154-7285207:1:exon

position:7285154:1
position: 7285154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7285207:1
position: 7285207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7289040-7289134:1:exon

position:7289040:1
position: 7289040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7289134:1
position: 7289134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7289808-7289921:1:exon

position:7289808:1
position: 7289808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7289921:1
position: 7289921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7291145-7291235:1:exon

position:7291145:1
position: 7291145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7291235:1
position: 7291235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7293237-7293316:1:exon

position:7293237:1
position: 7293237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7293316:1
position: 7293316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7294002-7294061:1:exon

position:7294002:1
position: 7294002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7294061:1
position: 7294061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7294912-7295005:1:exon

position:7294912:1
position: 7294912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7295005:1
position: 7295005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7295808-7295903:1:exon

position:7295808:1
position: 7295808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7295903:1
position: 7295903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7296593-7296651:1:exon

position:7296593:1
position: 7296593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7296651:1
position: 7296651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7298256-7298378:1:exon

position:7298256:1
position: 7298256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7298378:1
position: 7298378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7301456-7301871:1:exon

position:7301456:1
position: 7301456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925547
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925547
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A2-like
translation: MLTLLKSPAMLDAQELRDSMKGLGTDEDTLIEILATRPNRQIQEIKTLYKEEFQKDLEKDITSETTGRFQKLLLALLKGQREANSNVINYELIEEDAKALYAVASQKKNPDFDAWIPILTERSQNHLNRVFKLYKIYSSMDIMDTIKKQMKGDDEKGFIVLVQNIQNMPEYFAERLYDSMKSLGTRDKILTRVLATRCEIDLLSIRAEFRKKYGKSLYSAIQADTKGDYQCALLGLCRAEDL
SIO_010081: LOC109925547
subclass of: SO_0000673
so part of: LOC109925547
location: join(7289859..7289921,7291145..7291235,7293237..7293316,7294002..7294061,7294912..7295005,7295808..7295903,7296593..7296651,7298256..7298378,7301456..7301518)
location: region:7289859-7301518:1
so has part: feature:7289859-7289921:1:exon
so has part: feature:7291145-7291235:1:exon
so has part: feature:7293237-7293316:1:exon
so has part: feature:7294002-7294061:1:exon
so has part: feature:7294912-7295005:1:exon
so has part: feature:7295808-7295903:1:exon
so has part: feature:7296593-7296651:1:exon
so has part: feature:7298256-7298378:1:exon
so has part: feature:7301456-7301518:1:exon

XP_048476334.1
type: Protein
SIO_000068: ncbiprotein

position:7289859:1
position: 7289859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7301518:1
position: 7301518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7289859-7289921:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7291145-7291235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7293237-7293316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7294002-7294061:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7294912-7295005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7295808-7295903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7296593-7296651:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7298256-7298378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7301456-7301518:1:exon

LOC109925616
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925616
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7333385..7334398)
location: region:7333385-7334398:-1
so has part: feature:7333385-7334398:-1:exon

109925616
type: Gene
SIO_000068: ncbigene

position:7333385:-1
position: 7333385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7334398:-1
position: 7334398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7333385-7334398:-1:exon

LOC109925616
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109925616
product: uncharacterized LOC109925616
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007266136.1
SIO_010081: LOC109925616
so part of: LOC109925616
location: complement(join(7333385..7333599,7334273..7334398))
location: region:7333385-7334398:-1
so has part: feature:7334273-7334398:-1:exon
so has part: feature:7333385-7333599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7334273-7334398:-1:exon

position:7334273:-1
position: 7334273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7333385-7333599:-1:exon

position:7333599:-1
position: 7333599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487850
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7337232..7357298)
location: region:7337232-7357298:-1
so has part: feature:7337232-7357298:-1:exon
subclass of: SO_0000010

125487850
type: Gene
SIO_000068: ncbigene

position:7337232:-1
position: 7337232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7357298:-1
position: 7357298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7337232-7357298:-1:exon

LOC125487850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487850
product: tropomyosin alpha-4 chain-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620296.1
SIO_010081: LOC125487850
subclass of: SO_0000673
so part of: LOC125487850
location: complement(join(7337232..7339365,7351523..7351592,7353223..7353285,7356425..7356500,7357273..7357298))
location: region:7337232-7357298:-1
so has part: feature:7357273-7357298:-1:exon
so has part: feature:7356425-7356500:-1:exon
so has part: feature:7353223-7353285:-1:exon
so has part: feature:7351523-7351592:-1:exon
so has part: feature:7337232-7339365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7357273-7357298:-1:exon

position:7357273:-1
position: 7357273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7356425-7356500:-1:exon

position:7356425:-1
position: 7356425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7356500:-1
position: 7356500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7353223-7353285:-1:exon

position:7353223:-1
position: 7353223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7353285:-1
position: 7353285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7351523-7351592:-1:exon

position:7351523:-1
position: 7351523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7351592:-1
position: 7351592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7337232-7339365:-1:exon

position:7339365:-1
position: 7339365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-4 chain-like
translation: MKGRQMKECKCAELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKLLTDKLKEAETRAEFAERTVAKLEKTIDDLEDKLCQTKEENSNMHRMLDQTLQELDHL
SIO_010081: LOC125487850
subclass of: SO_0000673
so part of: LOC125487850
location: complement(join(7339283..7339365,7351523..7351592,7353223..7353285,7356425..7356500,7357273..7357298))
location: region:7339283-7357298:-1
so has part: feature:7357273-7357298:-1:exon
so has part: feature:7356425-7356500:-1:exon
so has part: feature:7353223-7353285:-1:exon
so has part: feature:7351523-7351592:-1:exon
so has part: feature:7339283-7339365:-1:exon

XP_048476253.1
type: Protein
SIO_000068: ncbiprotein

position:7339283:-1
position: 7339283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7357273-7357298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7356425-7356500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7353223-7353285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7351523-7351592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7339283-7339365:-1:exon

LOC125487876
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7357274..7395166
location: region:7357274-7395166:1
so has part: feature:7357274-7395166:1:exon
subclass of: SO_0000010

125487876
type: Gene
SIO_000068: ncbigene

position:7357274:1
position: 7357274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7395166:1
position: 7395166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7357274-7395166:1:exon

LOC125487876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487876
product: ras-related protein Rab-13-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620378.1
SIO_010081: LOC125487876
subclass of: SO_0000673
so part of: LOC125487876
location: join(7357274..7357483,7377207..7377267,7377691..7377751,7378630..7378707,7384506..7384595,7385325..7385390,7386605..7386655,7392282..7395166)
location: region:7357274-7395166:1
so has part: feature:7357274-7357483:1:exon
so has part: feature:7377207-7377267:1:exon
so has part: feature:7377691-7377751:1:exon
so has part: feature:7378630-7378707:1:exon
so has part: feature:7384506-7384595:1:exon
so has part: feature:7385325-7385390:1:exon
so has part: feature:7386605-7386655:1:exon
so has part: feature:7392282-7395166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7357274-7357483:1:exon

position:7357483:1
position: 7357483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7377207-7377267:1:exon

position:7377207:1
position: 7377207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7377267:1
position: 7377267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7377691-7377751:1:exon

position:7377691:1
position: 7377691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7377751:1
position: 7377751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7378630-7378707:1:exon

position:7378630:1
position: 7378630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7378707:1
position: 7378707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7384506-7384595:1:exon

position:7384506:1
position: 7384506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7384595:1
position: 7384595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7385325-7385390:1:exon

position:7385325:1
position: 7385325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7385390:1
position: 7385390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7386605-7386655:1:exon

position:7386605:1
position: 7386605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7386655:1
position: 7386655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7392282-7395166:1:exon

position:7392282:1
position: 7392282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-13-like
translation: MAKAYDYLFKLLLIGDSGVGKTCLIIRFADDNFNSTYISTIGIDFKIKTVDVGGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASATVERMLLGNKCDMENKRKVPKDKAEKLAKDHGIRFFETSAKSSLNVEEAFRSLAHDILIKTSKKSGFGSPSYKAPLESSPKTSPSKCSLV
SIO_010081: LOC125487876
subclass of: SO_0000673
so part of: LOC125487876
location: join(7357360..7357483,7377207..7377267,7377691..7377751,7378630..7378707,7384506..7384595,7385325..7385390,7386605..7386655,7392282..7392359)
location: region:7357360-7392359:1
so has part: feature:7357360-7357483:1:exon
so has part: feature:7377207-7377267:1:exon
so has part: feature:7377691-7377751:1:exon
so has part: feature:7378630-7378707:1:exon
so has part: feature:7384506-7384595:1:exon
so has part: feature:7385325-7385390:1:exon
so has part: feature:7386605-7386655:1:exon
so has part: feature:7392282-7392359:1:exon

XP_048476335.1
type: Protein
SIO_000068: ncbiprotein

position:7357360:1
position: 7357360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7392359:1
position: 7392359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7357360-7357483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7377207-7377267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7377691-7377751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7378630-7378707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7384506-7384595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7385325-7385390:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7386605-7386655:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7392282-7392359:1:exon

LOC109924234
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7396456..7426249
location: region:7396456-7426249:1
so has part: feature:7396456-7426249:1:exon
subclass of: SO_0000010

109924234
type: Gene
SIO_000068: ncbigene

position:7396456:1
position: 7396456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7426249:1
position: 7426249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7396456-7426249:1:exon

LOC109924234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924234
product: gamma-secretase subunit APH-1A-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 long SRA reads, 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048620383.1
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7396456..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7416071..7416194,7426124..7426249)
location: region:7396456-7426249:1
so has part: feature:7396456-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7426124-7426249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7396456-7397959:1:exon

position:7397959:1
position: 7397959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

position:7402864:1
position: 7402864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7403034:1
position: 7403034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

position:7406800:1
position: 7406800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7406873:1
position: 7406873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

position:7407541:1
position: 7407541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7407663:1
position: 7407663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7416071-7416194:1:exon

position:7416071:1
position: 7416071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7416194:1
position: 7416194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7426124-7426249:1:exon

position:7426124:1
position: 7426124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924234
product: gamma-secretase subunit APH-1A-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048620385.1
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7396456..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7416071..7416194,7426146..7426249)
location: region:7396456-7426249:1
so has part: feature:7396456-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7426146-7426249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7396456-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7426146-7426249:1:exon

position:7426146:1
position: 7426146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924234
product: gamma-secretase subunit APH-1A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 long SRA reads, 20 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048620381.1
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7396456..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7409079..7409206,7416071..7416194,7426124..7426245)
location: region:7396456-7426245:1
so has part: feature:7396456-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7409079-7409206:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7426124-7426245:1:exon

position:7426245:1
position: 7426245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7396456-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7409079-7409206:1:exon

position:7409079:1
position: 7409079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7409206:1
position: 7409206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7426124-7426245:1:exon

LOC109924234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924234
product: gamma-secretase subunit APH-1A-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 long SRA reads, 20 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048620382.1
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7396456..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7409079..7409206,7416071..7416194,7426146..7426245)
location: region:7396456-7426245:1
so has part: feature:7396456-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7409079-7409206:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7426146-7426245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7396456-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7409079-7409206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7426146-7426245:1:exon

LOC109924234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924234
product: gamma-secretase subunit APH-1A-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620380.1
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7396456..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7409079..7409206,7416071..7416194,7417996..7422169)
location: region:7396456-7422169:1
so has part: feature:7396456-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7409079-7409206:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7417996-7422169:1:exon

position:7422169:1
position: 7422169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7396456-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7409079-7409206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7417996-7422169:1:exon

position:7417996:1
position: 7417996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924234
product: gamma-secretase subunit APH-1A-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620379.1
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7396456..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7409079..7409206,7416071..7416194,7418000..7422169)
location: region:7396456-7422169:1
so has part: feature:7396456-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7409079-7409206:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7418000-7422169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7396456-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7409079-7409206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7418000-7422169:1:exon

position:7418000:1
position: 7418000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924234
product: gamma-secretase subunit APH-1A-like, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620386.1
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7396456..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7416071..7416194,7417996..7422169)
location: region:7396456-7422169:1
so has part: feature:7396456-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7417996-7422169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7396456-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7417996-7422169:1:exon

LOC109924234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924234
product: gamma-secretase subunit APH-1A-like, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048620384.1
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7396456..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7416071..7416194,7418000..7422169)
location: region:7396456-7422169:1
so has part: feature:7396456-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7418000-7422169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7396456-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7418000-7422169:1:exon

LOC109924234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A-like isoform X5
translation: MPEIRFAQTIVKQPRHPTPATPIGRGVRGRAALRPAEGPVKRAHPDPPKLGKGGERGGGGPADGGGTFKPGLRPEANASLPSAIMSAAVFFGCTFIAFGPAFGLLLFTVAGDPLRVIILVAGSFFWLVSLLLSSLLWFVAVQLSNKANAGVQHGLLMMGAGASVLLQEAFRFAYYKLLKKADQGLAAMSEDGRSPISIGQMAYVSGLAFGIASGAFSVINVLSDSLGPGMVGIHGDSPYFFLTSDVPEPSVRVEPPSDLRPHDRHWRMGLFDSGWIGAEYLALCHILSLIDWQDRKNVSKLGLFSLEHRKLRR
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7397595..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7416071..7416194,7426124..7426208)
location: region:7397595-7426208:1
so has part: feature:7397595-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7426124-7426208:1:exon

XP_048476340.1
type: Protein
SIO_000068: ncbiprotein

position:7397595:1
position: 7397595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7426208:1
position: 7426208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7397595-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7426124-7426208:1:exon

LOC109924234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A-like isoform X7
translation: MPEIRFAQTIVKQPRHPTPATPIGRGVRGRAALRPAEGPVKRAHPDPPKLGKGGERGGGGPADGGGTFKPGLRPEANASLPSAIMSAAVFFGCTFIAFGPAFGLLLFTVAGDPLRVIILVAGSFFWLVSLLLSSLLWFVAVQLSNKANAGVQHGLLMMGAGASVLLQEAFRFAYYKLLKKADQGLAAMSEDGRSPISIGQMAYVSGLAFGIASGAFSVINVLSDSLGPGMVGIHGDSPYFFLTSDVPEPSVRVEPPSDLRPHDRHWRMGLFDSGWIGAEYLALCHMIARTCQSWGYFPWNIGS
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7397595..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7416071..7416194,7426146..7426200)
location: region:7397595-7426200:1
so has part: feature:7397595-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7426146-7426200:1:exon

XP_048476342.1
type: Protein
SIO_000068: ncbiprotein

position:7426200:1
position: 7426200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7397595-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7426146-7426200:1:exon

LOC109924234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A-like isoform X4
translation: MPEIRFAQTIVKQPRHPTPATPIGRGVRGRAALRPAEGPVKRAHPDPPKLGKGGERGGGGPADGGGTFKPGLRPEANASLPSAIMSAAVFFGCTFIAFGPAFGLLLFTVAGDPLRVIILVAGSFFWLVSLLLSSLLWFVAVQLSNKANAGVQHGLLMMGAGASVLLQEAFRFAYYKLLKKADQGLAAMSEDGRSPISIGQMAYVSGLAFGIASGAFSVINVLSDSLGPGMVGIHGDSPYFFLTSAFLTMAVVLLHTSWGVVFFDACEKRRWLALTVVVVTHMLTSGLTFLNPRYELSLPLIYGLTIATGGWAFSTAGGSVQNIWRCVT
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7397595..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7409079..7409206,7416071..7416194,7426146..7426147)
location: region:7397595-7426147:1
so has part: feature:7397595-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7409079-7409206:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7426146-7426147:1:exon

XP_048476339.1
type: Protein
SIO_000068: ncbiprotein

position:7426147:1
position: 7426147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7397595-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7409079-7409206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7426146-7426147:1:exon

LOC109924234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A-like isoform X3
translation: MPEIRFAQTIVKQPRHPTPATPIGRGVRGRAALRPAEGPVKRAHPDPPKLGKGGERGGGGPADGGGTFKPGLRPEANASLPSAIMSAAVFFGCTFIAFGPAFGLLLFTVAGDPLRVIILVAGSFFWLVSLLLSSLLWFVAVQLSNKANAGVQHGLLMMGAGASVLLQEAFRFAYYKLLKKADQGLAAMSEDGRSPISIGQMAYVSGLAFGIASGAFSVINVLSDSLGPGMVGIHGDSPYFFLTSAFLTMAVVLLHTSWGVVFFDACEKRRWLALTVVVVTHMLTSGLTFLNPRYELSLPLIYGLTIATGGWAFSTAGGSVQNIWRCVTFSR
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7397595..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7409079..7409206,7416071..7416194,7426124..7426134)
location: region:7397595-7426134:1
so has part: feature:7397595-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7409079-7409206:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7426124-7426134:1:exon

XP_048476338.1
type: Protein
SIO_000068: ncbiprotein

position:7426134:1
position: 7426134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7397595-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7409079-7409206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7426124-7426134:1:exon

LOC109924234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A-like isoform X1
translation: MPEIRFAQTIVKQPRHPTPATPIGRGVRGRAALRPAEGPVKRAHPDPPKLGKGGERGGGGPADGGGTFKPGLRPEANASLPSAIMSAAVFFGCTFIAFGPAFGLLLFTVAGDPLRVIILVAGSFFWLVSLLLSSLLWFVAVQLSNKANAGVQHGLLMMGAGASVLLQEAFRFAYYKLLKKADQGLAAMSEDGRSPISIGQMAYVSGLAFGIASGAFSVINVLSDSLGPGMVGIHGDSPYFFLTSAFLTMAVVLLHTSWGVVFFDACEKRRWLALTVVVVTHMLTSGLTFLNPRYELSLPLIYGLTIATGGWAFSTAGGSVQNIWRCVTCSHLTPTFWSIQLCSHQLRIEGQSQHSQPLRSICLPFPLGTGAQLPSERQASTRTRTAIVCCTCQTGCLL
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7397595..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7409079..7409206,7416071..7416194,7418000..7418211)
location: region:7397595-7418211:1
so has part: feature:7397595-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7409079-7409206:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7418000-7418211:1:exon

XP_048476336.1
type: Protein
SIO_000068: ncbiprotein

position:7418211:1
position: 7418211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7397595-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406800-7406873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7407541-7407663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7409079-7409206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7416071-7416194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7418000-7418211:1:exon

LOC109924234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A-like isoform X2
translation: MPEIRFAQTIVKQPRHPTPATPIGRGVRGRAALRPAEGPVKRAHPDPPKLGKGGERGGGGPADGGGTFKPGLRPEANASLPSAIMSAAVFFGCTFIAFGPAFGLLLFTVAGDPLRVIILVAGSFFWLVSLLLSSLLWFVAVQLSNKANAGVQHGLLMMGAGASVLLQEAFRFAYYKLLKKADQGLAAMSEDGRSPISIGQMAYVSGLAFGIASGAFSVINVLSDSLGPGMVGIHGDSPYFFLTSAFLTMAVVLLHTSWGVVFFDACEKRRWLALTVVVVTHMLTSGLTFLNPRYELSLPLIYGLTIATGGWAFSTAGGSVQNIWRCVTCRQPSDPYILVYSALQPPAED
SIO_010081: LOC109924234
subclass of: SO_0000673
so part of: LOC109924234
location: join(7397595..7397959,7402864..7403034,7406800..7406873,7407541..7407663,7409079..7409206,7416071..7416194,7417996..7418060)
location: region:7397595-7418060:1
so has part: feature:7397595-7397959:1:exon
so has part: feature:7402864-7403034:1:exon
so has part: feature:7406800-7406873:1:exon
so has part: feature:7407541-7407663:1:exon
so has part: feature:7409079-7409206:1:exon
so has part: feature:7416071-7416194:1:exon
so has part: feature:7417996-7418060:1:exon

XP_048476337.1
type: Protein
SIO_000068: ncbiprotein

position:7418060:1
position: 7418060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7397595-7397959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7402864-7403034:1:exon