Rhincodon typus isolate 14 chromosome 41, sRhiTyp1.1, whole genome shotgun sequence.
type: Entry
definition: Rhincodon typus isolate 14 chromosome 41, sRhiTyp1.1, whole genome shotgun sequence.
sequence version: NC_063372.1
sequence date: 2022-06-09
sequence: sequence
division: CON
label: NC_063372.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA842712
dblink: SAMN19519256
keyword: WGS
keyword: RefSeq
source: Rhincodon typus (whale shark)
organism: Rhincodon typus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038838.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 12227147
topology: linear
so has quality: SO_0000987
location: 1..12227147
location: region:1-12227147:1
RO_0002162: 259920

NC_063372
type: RefSeq
SIO_000068: refseq

PRJNA842712
type: BioProject
SIO_000068: bioproject

SAMN19519256
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12227147:1
position: 12227147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12227147:1:source
so part of: sequence
organism: Rhincodon typus
mol type: genomic DNA
isolate: 14
chromosome: 41
sex: male
tissue type: blood
dev stage: adult
collected by: 2018-05-24

259920
type: Taxonomy
SIO_000068: taxonomy

LOC125487423
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 17234..53441
location: region:17234-53441:1
so has part: feature:17234-53441:1:exon
subclass of: SO_0000010

125487423
type: Gene
SIO_000068: ncbigene

position:17234:1
position: 17234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53441:1
position: 53441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17234-53441:1:exon

LOC125487423
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487423
product: SPRY domain-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_048618891.1
SIO_010081: LOC125487423
subclass of: SO_0000673
so part of: LOC125487423
location: join(17234..17362,21953..22098,23104..23179,46890..47014,53132..53441)
location: region:17234-53441:1
so has part: feature:17234-17362:1:exon
so has part: feature:21953-22098:1:exon
so has part: feature:23104-23179:1:exon
so has part: feature:46890-47014:1:exon
so has part: feature:53132-53441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17234-17362:1:exon

position:17362:1
position: 17362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21953-22098:1:exon

position:21953:1
position: 21953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22098:1
position: 22098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23104-23179:1:exon

position:23104:1
position: 23104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23179:1
position: 23179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:46890-47014:1:exon

position:46890:1
position: 46890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47014:1
position: 47014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53132-53441:1:exon

position:53132:1
position: 53132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487423
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing protein 3-like
translation: MEDFNLHYRFLNWRRRIREIREVRAVRHQERYKRILVDGDILSYHGNADEVGCYVAPRPLTKENHYFEVCIVDTGVRGTIAVGLVPQYYKLDHQPGWLPHSIAYHADDGKLFNGNEVGQQFGPKCFTGDRIGCGVHPESFDRGMATVFFTRNGKEVGKIHFIKVEAFIQPRRIRILFLCPLLQPIPGRESMTYDCRWDTPK
SIO_010081: LOC125487423
subclass of: SO_0000673
so part of: LOC125487423
location: join(21971..22098,23104..23179,46890..47014,53132..53408)
location: region:21971-53408:1
so has part: feature:21971-22098:1:exon
so has part: feature:23104-23179:1:exon
so has part: feature:46890-47014:1:exon
so has part: feature:53132-53408:1:exon

XP_048474848.1
type: Protein
SIO_000068: ncbiprotein

position:21971:1
position: 21971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53408:1
position: 53408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21971-22098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23104-23179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46890-47014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53132-53408:1:exon

LOC109926523
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135118..148487)
location: region:135118-148487:-1
so has part: feature:135118-148487:-1:exon
subclass of: SO_0000010

109926523
type: Gene
SIO_000068: ncbigene

position:135118:-1
position: 135118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148487:-1
position: 148487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135118-148487:-1:exon

LOC109926523
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926523
product: insulin-like growth factor-binding protein 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618890.1
SIO_010081: LOC109926523
subclass of: SO_0000673
so part of: LOC109926523
location: complement(join(135118..136598,141404..141523,145122..145330,148071..148487))
location: region:135118-148487:-1
so has part: feature:148071-148487:-1:exon
so has part: feature:145122-145330:-1:exon
so has part: feature:141404-141523:-1:exon
so has part: feature:135118-136598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148071-148487:-1:exon

position:148071:-1
position: 148071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145122-145330:-1:exon

position:145122:-1
position: 145122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145330:-1
position: 145330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141404-141523:-1:exon

position:141404:-1
position: 141404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141523:-1
position: 141523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135118-136598:-1:exon

position:136598:-1
position: 136598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926523
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor-binding protein 5
translation: MLRVCVLLACIGVPGRLGALGAMIECAPCNERALSACHPPRGCELVKESGCGCCLTCALAEGAACGVYTESCASSLRCIPRSGDKAPLQALLQGRAVCRSVKRRNQIQREGKPLDGGEKYSLTKKEHSGKNHGMQLVNPSQHLTLKPQRGNHHSPKGTIHTIVNPSKVPSVTTLVADSEYGPCRREMESILQDLKPEFFHSPEDIYIPNCDKQGFYRSKQCKPSRGRKRGHCWCVDKYGHSLPGLPNRKRPVSCVQSSSSSEEVRY
SIO_010081: LOC109926523
subclass of: SO_0000673
so part of: LOC109926523
location: complement(join(136458..136598,141404..141523,145122..145330,148071..148401))
location: region:136458-148401:-1
so has part: feature:148071-148401:-1:exon
so has part: feature:145122-145330:-1:exon
so has part: feature:141404-141523:-1:exon
so has part: feature:136458-136598:-1:exon

XP_048474847.1
type: Protein
SIO_000068: ncbiprotein

position:136458:-1
position: 136458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148401:-1
position: 148401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148071-148401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145122-145330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141404-141523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136458-136598:-1:exon

LOC109926443
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 206617..309495
location: region:206617-309495:1
so has part: feature:206617-309495:1:exon
subclass of: SO_0000010

109926443
type: Gene
SIO_000068: ncbigene

position:206617:1
position: 206617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309495:1
position: 309495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206617-309495:1:exon

LOC109926443
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926443
product: SPRY domain-containing protein 3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618819.1
SIO_010081: LOC109926443
subclass of: SO_0000673
so part of: LOC109926443
location: join(206617..206817,237699..237756,281043..281162,298257..298396,307808..309495)
location: region:206617-309495:1
so has part: feature:206617-206817:1:exon
so has part: feature:237699-237756:1:exon
so has part: feature:281043-281162:1:exon
so has part: feature:298257-298396:1:exon
so has part: feature:307808-309495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206617-206817:1:exon

position:206817:1
position: 206817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237699-237756:1:exon

position:237699:1
position: 237699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237756:1
position: 237756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:281043-281162:1:exon

position:281043:1
position: 281043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281162:1
position: 281162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:298257-298396:1:exon

position:298257:1
position: 298257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298396:1
position: 298396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307808-309495:1:exon

position:307808:1
position: 307808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926443
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing protein 3-like
translation: MSSTCSETPRTLAPGRQYTILESHSRLQKRLSVPLTIEPPTTIARLDFAPACSTAEPVVVPQAWLLLDYPKNRHPGWSRGSVAYHADDGKLFQGSGVGDPFGPRCYKGDIMGCGIMFPRDYILDSDADSDDYVDAAEVKPKQRRVRNIMYFNDEDEEDEGEEMEQEYDGKKVTVFFTRNGKIIGRKEAPVPSGGFYPTIGMLSNGEKVKVDLHPLSG
SIO_010081: LOC109926443
subclass of: SO_0000673
so part of: LOC109926443
location: join(206617..206817,237699..237756,281043..281162,298257..298396,307808..307942)
location: region:206617-307942:1
so has part: feature:206617-206817:1:exon
so has part: feature:237699-237756:1:exon
so has part: feature:281043-281162:1:exon
so has part: feature:298257-298396:1:exon
so has part: feature:307808-307942:1:exon

XP_048474776.1
type: Protein
SIO_000068: ncbiprotein

position:307942:1
position: 307942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206617-206817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237699-237756:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281043-281162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:298257-298396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307808-307942:1:exon

LOC109926515
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(314674..360093)
location: region:314674-360093:-1
so has part: feature:314674-360093:-1:exon
subclass of: SO_0000010

109926515
type: Gene
SIO_000068: ncbigene

position:314674:-1
position: 314674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360093:-1
position: 360093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314674-360093:-1:exon

LOC109926515
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926515
product: calcitonin gene-related peptide type 1 receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618820.1
SIO_010081: LOC109926515
subclass of: SO_0000673
so part of: LOC109926515
location: complement(join(314674..315374,317094..317135,318376..318594,321314..321380,323184..323244,330014..330167,345848..345974,351471..351562,355794..355906,358866..359015,360030..360093))
location: region:314674-360093:-1
so has part: feature:360030-360093:-1:exon
so has part: feature:358866-359015:-1:exon
so has part: feature:355794-355906:-1:exon
so has part: feature:351471-351562:-1:exon
so has part: feature:345848-345974:-1:exon
so has part: feature:330014-330167:-1:exon
so has part: feature:323184-323244:-1:exon
so has part: feature:321314-321380:-1:exon
so has part: feature:318376-318594:-1:exon
so has part: feature:317094-317135:-1:exon
so has part: feature:314674-315374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360030-360093:-1:exon

position:360030:-1
position: 360030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358866-359015:-1:exon

position:358866:-1
position: 358866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359015:-1
position: 359015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:355794-355906:-1:exon

position:355794:-1
position: 355794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355906:-1
position: 355906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:351471-351562:-1:exon

position:351471:-1
position: 351471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351562:-1
position: 351562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:345848-345974:-1:exon

position:345848:-1
position: 345848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345974:-1
position: 345974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330014-330167:-1:exon

position:330014:-1
position: 330014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330167:-1
position: 330167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:323184-323244:-1:exon

position:323184:-1
position: 323184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323244:-1
position: 323244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:321314-321380:-1:exon

position:321314:-1
position: 321314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321380:-1
position: 321380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:318376-318594:-1:exon

position:318376:-1
position: 318376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318594:-1
position: 318594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:317094-317135:-1:exon

position:317094:-1
position: 317094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317135:-1
position: 317135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:314674-315374:-1:exon

position:315374:-1
position: 315374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcitonin gene-related peptide type 1 receptor-like
translation: MAAAIIIMSSSSDSEWAHPYYRSKHLICCVYYFAGSYCNRTWDGWLCWDDSSAKSMSAQHCPDYYQVFDPAEKATKICTENGKWYRHPSSNRIWTNYTQCTAQTMGKVKTVWNLYYSAITGHVISIVCLLLALSIFYYFKSLSCQRISLHKNLFVSYILNSIVSIIWLKVVANNQDLVSRNPVDCKVLNFIHLYLTSCTYFWMLCEGIYLHTLIIVAVFVEQQQLFWYYILGWGFPLIPAIIHAAARSKYFNDNCWISSGTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLRVTHQAQSKAYMKVVRATLILVPLLGIQYVLVPSKPKGHITGEIYEHVMHICIHYQGILVTTIFCFYNGEVQSAFKRQWSQYKVQCSHQLTSTDVFHSNATSVAEITRYMLTQPTNTNHINSKSCPETVAVKVPSIHM
SIO_010081: LOC109926515
subclass of: SO_0000673
so part of: LOC109926515
location: complement(join(315168..315374,317094..317135,318376..318594,321314..321380,323184..323244,330014..330167,345848..345974,351471..351562,355794..355906,358866..359015,360030..360093))
location: region:315168-360093:-1
so has part: feature:360030-360093:-1:exon
so has part: feature:358866-359015:-1:exon
so has part: feature:355794-355906:-1:exon
so has part: feature:351471-351562:-1:exon
so has part: feature:345848-345974:-1:exon
so has part: feature:330014-330167:-1:exon
so has part: feature:323184-323244:-1:exon
so has part: feature:321314-321380:-1:exon
so has part: feature:318376-318594:-1:exon
so has part: feature:317094-317135:-1:exon
so has part: feature:315168-315374:-1:exon

XP_048474777.1
type: Protein
SIO_000068: ncbiprotein

position:315168:-1
position: 315168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360030-360093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358866-359015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355794-355906:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351471-351562:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345848-345974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330014-330167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323184-323244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321314-321380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318376-318594:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317094-317135:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315168-315374:-1:exon

LOC125487420
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 492925..532802
location: region:492925-532802:1
so has part: feature:492925-532802:1:exon
subclass of: SO_0000010

125487420
type: Gene
SIO_000068: ncbigene

position:492925:1
position: 492925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532802:1
position: 532802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492925-532802:1:exon

LOC125487420
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487420
product: uncharacterized LOC125487420, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048618882.1
SIO_010081: LOC125487420
subclass of: SO_0000673
so part of: LOC125487420
location: join(492925..493033,528036..532802)
location: region:492925-532802:1
so has part: feature:492925-493033:1:exon
so has part: feature:528036-532802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492925-493033:1:exon

position:493033:1
position: 493033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528036-532802:1:exon

position:528036:1
position: 528036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487420
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC125487420
product: uncharacterized LOC125487420, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007265882.1
SIO_010081: LOC125487420
so part of: LOC125487420
location: join(492925..493033,511943..514416,523962..524702)
location: region:492925-524702:1
so has part: feature:492925-493033:1:exon
so has part: feature:511943-514416:1:exon
so has part: feature:523962-524702:1:exon

position:524702:1
position: 524702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492925-493033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511943-514416:1:exon

position:511943:1
position: 511943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514416:1
position: 514416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:523962-524702:1:exon

position:523962:1
position: 523962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487420
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC125487420
product: uncharacterized LOC125487420, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007265883.1
SIO_010081: LOC125487420
so part of: LOC125487420
location: join(492925..493033,509547..509680,511943..514605)
location: region:492925-514605:1
so has part: feature:492925-493033:1:exon
so has part: feature:509547-509680:1:exon
so has part: feature:511943-514605:1:exon

position:514605:1
position: 514605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492925-493033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:509547-509680:1:exon

position:509547:1
position: 509547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509680:1
position: 509680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:511943-514605:1:exon

LOC125487420
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC125487420
product: uncharacterized LOC125487420, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_007265881.1
SIO_010081: LOC125487420
so part of: LOC125487420
location: join(492925..493033,511943..514605)
location: region:492925-514605:1
so has part: feature:492925-493033:1:exon
so has part: feature:511943-514605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492925-493033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511943-514605:1:exon

LOC125487420
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC125487420
product: uncharacterized LOC125487420, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_007265885.1
SIO_010081: LOC125487420
so part of: LOC125487420
location: join(492925..493033,514284..514605)
location: region:492925-514605:1
so has part: feature:492925-493033:1:exon
so has part: feature:514284-514605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492925-493033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514284-514605:1:exon

position:514284:1
position: 514284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487420
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC125487420
product: uncharacterized LOC125487420, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007265884.1
SIO_010081: LOC125487420
so part of: LOC125487420
location: join(492925..493033,494220..495224)
location: region:492925-495224:1
so has part: feature:492925-493033:1:exon
so has part: feature:494220-495224:1:exon

position:495224:1
position: 495224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492925-493033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494220-495224:1:exon

position:494220:1
position: 494220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487420
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487420
product: uncharacterized LOC125487420, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048618881.1
SIO_010081: LOC125487420
subclass of: SO_0000673
so part of: LOC125487420
location: join(525872..525933,528036..532802)
location: region:525872-532802:1
so has part: feature:525872-525933:1:exon
so has part: feature:528036-532802:1:exon

position:525872:1
position: 525872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525872-525933:1:exon

position:525933:1
position: 525933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528036-532802:1:exon

LOC125487420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125487420
translation: MCYPSSHSLCYPSSHSHCVIPALTHCVIPAPTLTVLSQLPLTALSQLPVSVLLQLPITGYPSSRSLHYPRPHLLHYPSSHSLCYPSCYSHCTIPSPIHCVSSAPTYCVVPGSLSLQYPSTDAHCVIPAPSLTALSHSHCHCIIPSPTHCIILGALSVRYLSSHSLGYPSFQSLHYPSSRSLQYPGFTVTVLSQRPLTVLSQVHSHCITPAPTHCVIPAPSHCVIAAPTYCVFRGSLSLRYPGFTLIALSQLPLTWLSQLQVTPLSQLPLTVLPQLLLTVLSQLPLTVLHQLLLTVLSQLPLTVLSHLPLTVLPQLPLTVLPQLLLIVLSQFPVTVLSQLPTTVLCQLPITVLSRLPITALSQTPLTALSKLQLSALSQFHSDCVIPAPTYGIILGSLSLYYTSFHSLCYPSSQSLLSQLPLTALSSVHSHCIIPAATYCVIPGSLSLHYPSSHLLHYPGFILTALSQLPLTALSWVHSHYIILASTHCVIPAPTHCVIPAPTLTVLSQLPLSLCYLSSHSFCYPSSHSHCIIPAPTHSVIPAPSHCVIAAPIYCVVPGSLSLHYPSTDAHCVIPAPSLTALSHSHCHYIIPSPTHCIILGSLSVRYLSSHSLGYPSFQSLHYFSSRSLQYPGFTVTTLSQLCYFSPHLLCYPRSPSLLNPSTKLLCYASPHSHCITPASVLVASSQLILTAPTLTVLFHLPHNVLSRVHSHCVILAPIYCGIPGSLSLQCPSFHFLCYPSSRLLHNASSRPHCIIPAPTLTALSHLPPSPCYPNSHSHCVIPALIHSVIPAPSHCVIAAPDHCVIPALDHCVIPAPDHCIISTPIRCDIPGSLSPCYPSSHSLHNLSFHLLHYSSCHLLCYPSSHSLHYPSFTLIALSQFPLSVHYPSSHSH
SIO_010081: LOC125487420
subclass of: SO_0000673
so part of: LOC125487420
location: 528917..531595
location: region:528917-531595:1
so has part: feature:528917-531595:1:exon

XP_048474838.1
type: Protein
SIO_000068: ncbiprotein

position:528917:1
position: 528917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531595:1
position: 531595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528917-531595:1:exon

LOC125487420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125487420
translation: MCYPSSHSLCYPSSHSHCVIPALTHCVIPAPTLTVLSQLPLTALSQLPVSVLLQLPITGYPSSRSLHYPRPHLLHYPSSHSLCYPSCYSHCTIPSPIHCVSSAPTYCVVPGSLSLQYPSTDAHCVIPAPSLTALSHSHCHCIIPSPTHCIILGALSVRYLSSHSLGYPSFQSLHYPSSRSLQYPGFTVTVLSQRPLTVLSQVHSHCITPAPTHCVIPAPSHCVIAAPTYCVFRGSLSLRYPGFTLIALSQLPLTWLSQLQVTPLSQLPLTVLPQLLLTVLSQLPLTVLHQLLLTVLSQLPLTVLSHLPLTVLPQLPLTVLPQLLLIVLSQFPVTVLSQLPTTVLCQLPITVLSRLPITALSQTPLTALSKLQLSALSQFHSDCVIPAPTYGIILGSLSLYYTSFHSLCYPSSQSLLSQLPLTALSSVHSHCIIPAATYCVIPGSLSLHYPSSHLLHYPGFILTALSQLPLTALSWVHSHYIILASTHCVIPAPTHCVIPAPTLTVLSQLPLSLCYLSSHSFCYPSSHSHCIIPAPTHSVIPAPSHCVIAAPIYCVVPGSLSLHYPSTDAHCVIPAPSLTALSHSHCHYIIPSPTHCIILGSLSVRYLSSHSLGYPSFQSLHYFSSRSLQYPGFTVTTLSQLCYFSPHLLCYPRSPSLLNPSTKLLCYASPHSHCITPASVLVASSQLILTAPTLTVLFHLPHNVLSRVHSHCVILAPIYCGIPGSLSLQCPSFHFLCYPSSRLLHNASSRPHCIIPAPTLTALSHLPPSPCYPNSHSHCVIPALIHSVIPAPSHCVIAAPDHCVIPALDHCVIPAPDHCIISTPIRCDIPGSLSPCYPSSHSLHNLSFHLLHYSSCHLLCYPSSHSLHYPSFTLIALSQFPLSVHYPSSHSH
SIO_010081: LOC125487420
subclass of: SO_0000673
so part of: LOC125487420
location: 528917..531595
location: region:528917-531595:1
so has part: feature:528917-531595:1:exon

XP_048474839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528917-531595:1:exon

LOC109924142
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 631758..655711
location: region:631758-655711:1
so has part: feature:631758-655711:1:exon
subclass of: SO_0000010

109924142
type: Gene
SIO_000068: ncbigene

position:631758:1
position: 631758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655711:1
position: 655711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631758-655711:1:exon

LOC109924142
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924142
product: vitamin D3 receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 20 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618821.1
SIO_010081: LOC109924142
subclass of: SO_0000673
so part of: LOC109924142
location: join(631758..631924,638892..639033,647168..647203,648360..648456,652727..655711)
location: region:631758-655711:1
so has part: feature:631758-631924:1:exon
so has part: feature:638892-639033:1:exon
so has part: feature:647168-647203:1:exon
so has part: feature:648360-648456:1:exon
so has part: feature:652727-655711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631758-631924:1:exon

position:631924:1
position: 631924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638892-639033:1:exon

position:638892:1
position: 638892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639033:1
position: 639033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:647168-647203:1:exon

position:647168:1
position: 647168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647203:1
position: 647203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:648360-648456:1:exon

position:648360:1
position: 648360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648456:1
position: 648456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:652727-655711:1:exon

position:652727:1
position: 652727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924142
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor-like
translation: MSELPKLDLSIFGMVHDGINGPKRNEKLTMLPHLADLVSYSIQKIVGFAKAIPGFRELLADDQIALLKSSAIEIIMLRSNESFSVEDMSWKCGNDEFKYDINDVTRTGHNIPDVAGNREDFKVNSGGKGPNLGRCDKSKSRAKAKNRDRPGVQNRVQVECIQDGLSETLQSYIRAKHPPPGNRLLYPKMIQKLTDLRSLSEEHSKQFQFLTINPDCNTQLTPLVLEVFSNDVDQ
SIO_010081: LOC109924142
subclass of: SO_0000673
so part of: LOC109924142
location: join(631758..631924,638892..639033,647168..647203,648360..648456,652727..652989)
location: region:631758-652989:1
so has part: feature:631758-631924:1:exon
so has part: feature:638892-639033:1:exon
so has part: feature:647168-647203:1:exon
so has part: feature:648360-648456:1:exon
so has part: feature:652727-652989:1:exon

XP_048474778.1
type: Protein
SIO_000068: ncbiprotein

position:652989:1
position: 652989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631758-631924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638892-639033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647168-647203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648360-648456:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:652727-652989:1:exon

LOC125487409
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 680048..684139
location: region:680048-684139:1
so has part: feature:680048-684139:1:exon
subclass of: SO_0000010

125487409
type: Gene
SIO_000068: ncbigene

position:680048:1
position: 680048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684139:1
position: 684139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680048-684139:1:exon

LOC125487409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487409
product: SPRY domain-containing protein 4-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618822.1
SIO_010081: LOC125487409
subclass of: SO_0000673
so part of: LOC125487409
location: join(680048..680308,681408..681455,682055..682178,683113..684139)
location: region:680048-684139:1
so has part: feature:680048-680308:1:exon
so has part: feature:681408-681455:1:exon
so has part: feature:682055-682178:1:exon
so has part: feature:683113-684139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:680048-680308:1:exon

position:680308:1
position: 680308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:681408-681455:1:exon

position:681408:1
position: 681408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681455:1
position: 681455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682055-682178:1:exon

position:682055:1
position: 682055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682178:1
position: 682178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:683113-684139:1:exon

position:683113:1
position: 683113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing protein 4-like
translation: MAPCWRILRGIRYRFLLVAARRQLCSLEFPKRCKMLIGFSGVMSPECGKLDQFKVFLGESSLNKDLGRVMTGDWGYLGGYTEDELLLSVLGWEFIGWFACSDREDSAQCKGTRSGSGLPPGSSQEWLLEQCQTPIFSLKWSPWSDLNFKLDEKTAHSCLDLFKKETGVIYRTIGIDPSKVPKNPERFREWAVVLADVTLSTGKHYWEVTVKRSQEFRIGVAEANMSREECIGASDCSWVYAYLRRKWYSMSSNEMVPVDFFGKPDRVGFLLDCEDNKFSLIDVEKVAVISTITAEFKMPLVPAFALWDGELLTHSGMDILQGI
SIO_010081: LOC125487409
subclass of: SO_0000673
so part of: LOC125487409
location: join(680048..680308,681408..681455,682055..682178,683113..683651)
location: region:680048-683651:1
so has part: feature:680048-680308:1:exon
so has part: feature:681408-681455:1:exon
so has part: feature:682055-682178:1:exon
so has part: feature:683113-683651:1:exon

XP_048474779.1
type: Protein
SIO_000068: ncbiprotein

position:683651:1
position: 683651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680048-680308:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:681408-681455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682055-682178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683113-683651:1:exon

LOC109924443
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 707037..749787
location: region:707037-749787:1
so has part: feature:707037-749787:1:exon
subclass of: SO_0000010

109924443
type: Gene
SIO_000068: ncbigene

position:707037:1
position: 707037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749787:1
position: 749787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707037-749787:1:exon

LOC109924443
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924443
product: tumor necrosis factor receptor superfamily member 14-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618883.1
SIO_010081: LOC109924443
subclass of: SO_0000673
so part of: LOC109924443
location: join(707037..707322,711915..712008,719123..719248,728181..728330,735592..735673,739267..739409,741101..741120,743475..743658,748483..749787)
location: region:707037-749787:1
so has part: feature:707037-707322:1:exon
so has part: feature:711915-712008:1:exon
so has part: feature:719123-719248:1:exon
so has part: feature:728181-728330:1:exon
so has part: feature:735592-735673:1:exon
so has part: feature:739267-739409:1:exon
so has part: feature:741101-741120:1:exon
so has part: feature:743475-743658:1:exon
so has part: feature:748483-749787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:707037-707322:1:exon

position:707322:1
position: 707322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:711915-712008:1:exon

position:711915:1
position: 711915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712008:1
position: 712008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719123-719248:1:exon

position:719123:1
position: 719123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719248:1
position: 719248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:728181-728330:1:exon

position:728181:1
position: 728181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728330:1
position: 728330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:735592-735673:1:exon

position:735592:1
position: 735592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735673:1
position: 735673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:739267-739409:1:exon

position:739267:1
position: 739267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739409:1
position: 739409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:741101-741120:1:exon

position:741101:1
position: 741101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741120:1
position: 741120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:743475-743658:1:exon

position:743475:1
position: 743475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743658:1
position: 743658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:748483-749787:1:exon

position:748483:1
position: 748483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924443
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924443
product: tumor necrosis factor receptor superfamily member 14-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618885.1
SIO_010081: LOC109924443
subclass of: SO_0000673
so part of: LOC109924443
location: join(707037..707322,711915..712008,719123..719248,735592..735673,739267..739409,741101..741120,743475..743658,748483..749787)
location: region:707037-749787:1
so has part: feature:707037-707322:1:exon
so has part: feature:711915-712008:1:exon
so has part: feature:719123-719248:1:exon
so has part: feature:735592-735673:1:exon
so has part: feature:739267-739409:1:exon
so has part: feature:741101-741120:1:exon
so has part: feature:743475-743658:1:exon
so has part: feature:748483-749787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:707037-707322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711915-712008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719123-719248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735592-735673:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739267-739409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741101-741120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:743475-743658:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:748483-749787:1:exon

LOC109924443
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924443
product: tumor necrosis factor receptor superfamily member 14-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618884.1
SIO_010081: LOC109924443
subclass of: SO_0000673
so part of: LOC109924443
location: join(707038..707322,711915..712008,719123..719248,728181..728330,735592..735673,739267..739409,741101..741120,743478..743658,748483..749787)
location: region:707038-749787:1
so has part: feature:707038-707322:1:exon
so has part: feature:711915-712008:1:exon
so has part: feature:719123-719248:1:exon
so has part: feature:728181-728330:1:exon
so has part: feature:735592-735673:1:exon
so has part: feature:739267-739409:1:exon
so has part: feature:741101-741120:1:exon
so has part: feature:743478-743658:1:exon
so has part: feature:748483-749787:1:exon

position:707038:1
position: 707038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707038-707322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711915-712008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719123-719248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728181-728330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735592-735673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739267-739409:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741101-741120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:743478-743658:1:exon

position:743478:1
position: 743478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:748483-749787:1:exon

LOC109924443
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 14-like isoform X1
translation: MRKMPLSWILVVTVARYVMCSSHHNRCGEKEYEHQGICCPMCKPGHRVKGHCTQRSGTECYPCTDKTYQDGFNGDDDCKSCRPCGEGTFPIVACTSIRDTICDCLEGFHCESITVDGCEQCSKHSTCPPGEEVVSKGAYRRNTVCRRKQIGNALSEESSKEGTEVPVPGQTGDTSGCISYIYVVILSVLLVILLAILLFLMRKSLTSCFHSAIAWYSKQQKTKGKEAVIQRPVQEQGHELYLPVSVEEKSMDNSSTHTKPIYDFIEGKMTNCAPLKTKDVVLSELQCPDFGVAMSTKSSVEKFQDAEDFQMKDKWNLPG
SIO_010081: LOC109924443
subclass of: SO_0000673
so part of: LOC109924443
location: join(707284..707322,711915..712008,719123..719248,728181..728330,735592..735673,739267..739409,741101..741120,743475..743658,748483..748604)
location: region:707284-748604:1
so has part: feature:707284-707322:1:exon
so has part: feature:711915-712008:1:exon
so has part: feature:719123-719248:1:exon
so has part: feature:728181-728330:1:exon
so has part: feature:735592-735673:1:exon
so has part: feature:739267-739409:1:exon
so has part: feature:741101-741120:1:exon
so has part: feature:743475-743658:1:exon
so has part: feature:748483-748604:1:exon

XP_048474840.1
type: Protein
SIO_000068: ncbiprotein

position:707284:1
position: 707284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748604:1
position: 748604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707284-707322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711915-712008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719123-719248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728181-728330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735592-735673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739267-739409:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741101-741120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:743475-743658:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:748483-748604:1:exon

LOC109924443
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 14-like isoform X2
translation: MRKMPLSWILVVTVARYVMCSSHHNRCGEKEYEHQGICCPMCKPGHRVKGHCTQRSGTECYPCTDKTYQDGFNGDDDCKSCRPCGEGTFPIVACTSIRDTICDCLEGFHCESITVDGCEQCSKHSTCPPGEEVVSKGAYRRNTVCRRKQIGNALSEESSKEGTEVPVPGQTGDTSGCISYIYVVILSVLLVILLAILLFLMRKSLTSCFHSAIAWYSKQKTKGKEAVIQRPVQEQGHELYLPVSVEEKSMDNSSTHTKPIYDFIEGKMTNCAPLKTKDVVLSELQCPDFGVAMSTKSSVEKFQDAEDFQMKDKWNLPG
SIO_010081: LOC109924443
subclass of: SO_0000673
so part of: LOC109924443
location: join(707284..707322,711915..712008,719123..719248,728181..728330,735592..735673,739267..739409,741101..741120,743478..743658,748483..748604)
location: region:707284-748604:1
so has part: feature:707284-707322:1:exon
so has part: feature:711915-712008:1:exon
so has part: feature:719123-719248:1:exon
so has part: feature:728181-728330:1:exon
so has part: feature:735592-735673:1:exon
so has part: feature:739267-739409:1:exon
so has part: feature:741101-741120:1:exon
so has part: feature:743478-743658:1:exon
so has part: feature:748483-748604:1:exon

XP_048474841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707284-707322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711915-712008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719123-719248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728181-728330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735592-735673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739267-739409:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741101-741120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:743478-743658:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:748483-748604:1:exon

LOC109924443
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109924443 isoform X3
translation: MRKMPLSWILVVTVARYVMCSSHHNRCGEKEYEHQGICCPMCKPGHRVKGHCTQRSGTECYPCTDKTYQDGFNGDDDCKSCRPCGEGAYRRNTVCRRKQIGNALSEESSKEGTEVPVPGQTGDTSGCISYIYVVILSVLLVILLAILLFLMRKSLTSCFHSAIAWYSKQQKTKGKEAVIQRPVQEQGHELYLPVSVEEKSMDNSSTHTKPIYDFIEGKMTNCAPLKTKDVVLSELQCPDFGVAMSTKSSVEKFQDAEDFQMKDKWNLPG
SIO_010081: LOC109924443
subclass of: SO_0000673
so part of: LOC109924443
location: join(707284..707322,711915..712008,719123..719248,735592..735673,739267..739409,741101..741120,743475..743658,748483..748604)
location: region:707284-748604:1
so has part: feature:707284-707322:1:exon
so has part: feature:711915-712008:1:exon
so has part: feature:719123-719248:1:exon
so has part: feature:735592-735673:1:exon
so has part: feature:739267-739409:1:exon
so has part: feature:741101-741120:1:exon
so has part: feature:743475-743658:1:exon
so has part: feature:748483-748604:1:exon

XP_048474842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707284-707322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711915-712008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719123-719248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735592-735673:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739267-739409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741101-741120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:743475-743658:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:748483-748604:1:exon

LOC109924444
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(750679..754196)
location: region:750679-754196:-1
so has part: feature:750679-754196:-1:exon
subclass of: SO_0000010

109924444
type: Gene
SIO_000068: ncbigene

position:750679:-1
position: 750679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754196:-1
position: 754196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750679-754196:-1:exon

LOC109924444
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924444
product: caspase b-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020524442.2
SIO_010081: LOC109924444
subclass of: SO_0000673
so part of: LOC109924444
location: complement(join(750679..751056,751815..751907,753497..754196))
location: region:750679-754196:-1
so has part: feature:753497-754196:-1:exon
so has part: feature:751815-751907:-1:exon
so has part: feature:750679-751056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753497-754196:-1:exon

position:753497:-1
position: 753497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751815-751907:-1:exon

position:751815:-1
position: 751815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751907:-1
position: 751907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:750679-751056:-1:exon

position:751056:-1
position: 751056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109924444
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase b-like
translation: MTTRQFLLEVLDELSEDDFERFLFFLGDNVEFKPIPRGRLEGKSRQQMASLLQDFYAEEAQDICRKILNQIPKVDLVKKMFGDGNTNGSKGTPVQKKRERLEGCEFDGVLSDPLDNEIIMSKKNKMEPKILTDQKLMQLAENMGHNWQQIGIQFLGLQSYEIEQCESQHLLVVMQRFEMLKCWRNREKEGATALKLHSILANKECPISSAQFDFLQKGN
SIO_010081: LOC109924444
subclass of: SO_0000673
so part of: LOC109924444
location: complement(join(750770..751056,751815..751907,753497..753776))
location: region:750770-753776:-1
so has part: feature:753497-753776:-1:exon
so has part: feature:751815-751907:-1:exon
so has part: feature:750770-751056:-1:exon

XP_020380031.1
type: Protein
SIO_000068: ncbiprotein

position:750770:-1
position: 750770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753776:-1
position: 753776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753497-753776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751815-751907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750770-751056:-1:exon

hat1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: hat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 804936..823882
location: region:804936-823882:1
so has part: feature:804936-823882:1:exon
subclass of: SO_0000010

109923942
type: Gene
SIO_000068: ncbigene

position:804936:1
position: 804936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823882:1
position: 823882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804936-823882:1:exon

hat1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hat1
product: histone acetyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_048618823.1
SIO_010081: hat1
subclass of: SO_0000673
so part of: hat1
location: join(804936..805029,805398..805473,810656..810776,812079..812258,823377..823498,823759..823882)
location: region:804936-823882:1
so has part: feature:804936-805029:1:exon
so has part: feature:805398-805473:1:exon
so has part: feature:810656-810776:1:exon
so has part: feature:812079-812258:1:exon
so has part: feature:823377-823498:1:exon
so has part: feature:823759-823882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804936-805029:1:exon

position:805029:1
position: 805029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:805398-805473:1:exon

position:805398:1
position: 805398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805473:1
position: 805473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:810656-810776:1:exon

position:810656:1
position: 810656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810776:1
position: 810776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:812079-812258:1:exon

position:812079:1
position: 812079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812258:1
position: 812258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:823377-823498:1:exon

position:823377:1
position: 823377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823498:1
position: 823498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:823759-823882:1:exon

position:823759:1
position: 823759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hat1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase type B catalytic subunit
translation: MSDLFSVELLNLEKKLAEYKCDTNKAIRLKLVRFVEDLEDETMSFSPLYSHQVFGDEESVFGYKDLEIQLYYSTCSLTTFFNIKYSSKVVEKYDNVEVDNVESKLLEFIPAGYCINLDEFIVQLEKDASFRPFGFLIHSYTVYDEKEGLELNYEIYKTDISCPGFREYHERLQTFLIWFIETASFIDVDDDKWQFFLVFEKYLEDGLPRFATVGYMTVYNFYAYPDKMRPRIG
SIO_010081: hat1
subclass of: SO_0000673
so part of: hat1
location: join(804936..805029,805398..805473,810656..810776,812079..812258,823377..823498,823759..823867)
location: region:804936-823867:1
so has part: feature:804936-805029:1:exon
so has part: feature:805398-805473:1:exon
so has part: feature:810656-810776:1:exon
so has part: feature:812079-812258:1:exon
so has part: feature:823377-823498:1:exon
so has part: feature:823759-823867:1:exon

XP_048474780.1
type: Protein
SIO_000068: ncbiprotein

position:823867:1
position: 823867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804936-805029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805398-805473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:810656-810776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812079-812258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:823377-823498:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823759-823867:1:exon

LOC109923710
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(830539..882458)
location: region:830539-882458:-1
so has part: feature:830539-882458:-1:exon
subclass of: SO_0000010

109923710
type: Gene
SIO_000068: ncbigene

position:830539:-1
position: 830539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882458:-1
position: 882458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830539-882458:-1:exon

LOC109923710
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923710
product: SWI/SNF complex subunit SMARCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618824.1
SIO_010081: LOC109923710
subclass of: SO_0000673
so part of: LOC109923710
location: complement(join(830539..830743,830853..831272,835343..835682,835809..835943,836447..836451,852311..852569,855417..855479,855991..856107,856390..856543,863684..863797,867339..867410,868430..868560,873210..873247,876430..876489,882302..882458))
location: region:830539-882458:-1
so has part: feature:882302-882458:-1:exon
so has part: feature:876430-876489:-1:exon
so has part: feature:873210-873247:-1:exon
so has part: feature:868430-868560:-1:exon
so has part: feature:867339-867410:-1:exon
so has part: feature:863684-863797:-1:exon
so has part: feature:856390-856543:-1:exon
so has part: feature:855991-856107:-1:exon
so has part: feature:855417-855479:-1:exon
so has part: feature:852311-852569:-1:exon
so has part: feature:836447-836451:-1:exon
so has part: feature:835809-835943:-1:exon
so has part: feature:835343-835682:-1:exon
so has part: feature:830853-831272:-1:exon
so has part: feature:830539-830743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882302-882458:-1:exon

position:882302:-1
position: 882302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876430-876489:-1:exon

position:876430:-1
position: 876430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876489:-1
position: 876489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:873210-873247:-1:exon

position:873210:-1
position: 873210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873247:-1
position: 873247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:868430-868560:-1:exon

position:868430:-1
position: 868430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868560:-1
position: 868560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:867339-867410:-1:exon

position:867339:-1
position: 867339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867410:-1
position: 867410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:863684-863797:-1:exon

position:863684:-1
position: 863684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863797:-1
position: 863797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:856390-856543:-1:exon

position:856390:-1
position: 856390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856543:-1
position: 856543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:855991-856107:-1:exon

position:855991:-1
position: 855991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856107:-1
position: 856107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:855417-855479:-1:exon

position:855417:-1
position: 855417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855479:-1
position: 855479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:852311-852569:-1:exon

position:852311:-1
position: 852311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852569:-1
position: 852569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:836447-836451:-1:exon

position:836447:-1
position: 836447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836451:-1
position: 836451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:835809-835943:-1:exon

position:835809:-1
position: 835809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835943:-1
position: 835943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:835343-835682:-1:exon

position:835343:-1
position: 835343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835682:-1
position: 835682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:830853-831272:-1:exon

position:830853:-1
position: 830853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831272:-1
position: 831272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:830539-830743:-1:exon

position:830743:-1
position: 830743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109923710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2
translation: MTALHLVLRRSPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDNLETTGKDEEDTSAGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAADMQNFGLRTDMYAKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAIIPTSVQPVPPAAVQQGAVNQGSGDSIAQSIPQQQQTPPTQRQHQQQQQAQPAVLPHGQPPFPSQQTPNQLMPSNMPVGMPANMSGNMAAGMPSVVPAIIACSMGSVISENVPANLPASMPNQVHGHLPSSMPGGVPGNVCIGLPGRLPVDLPSSVHPNIPGNIIPPSMSLTSTPASAAAQSPAIVAAMQGNTSPLQEIQK
SIO_010081: LOC109923710
subclass of: SO_0000673
so part of: LOC109923710
location: complement(join(830730..830743,830853..831272,835343..835682,835809..835943,836447..836451,852311..852569,855417..855479,855991..856107,856390..856543,863684..863797,867339..867410,868430..868560,873210..873247,876430..876489,882302..882458))
location: region:830730-882458:-1
so has part: feature:882302-882458:-1:exon
so has part: feature:876430-876489:-1:exon
so has part: feature:873210-873247:-1:exon
so has part: feature:868430-868560:-1:exon
so has part: feature:867339-867410:-1:exon
so has part: feature:863684-863797:-1:exon
so has part: feature:856390-856543:-1:exon
so has part: feature:855991-856107:-1:exon
so has part: feature:855417-855479:-1:exon
so has part: feature:852311-852569:-1:exon
so has part: feature:836447-836451:-1:exon
so has part: feature:835809-835943:-1:exon
so has part: feature:835343-835682:-1:exon
so has part: feature:830853-831272:-1:exon
so has part: feature:830730-830743:-1:exon

XP_048474781.1
type: Protein
SIO_000068: ncbiprotein

position:830730:-1
position: 830730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882302-882458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876430-876489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873210-873247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:868430-868560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867339-867410:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:863684-863797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856390-856543:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:855991-856107:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855417-855479:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:852311-852569:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:836447-836451:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:835809-835943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:835343-835682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:830853-831272:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830730-830743:-1:exon

LOC125487410
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487410
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 884125..914622
location: region:884125-914622:1
so has part: feature:884125-914622:1:exon
subclass of: SO_0000010

125487410
type: Gene
SIO_000068: ncbigene

position:884125:1
position: 884125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914622:1
position: 914622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884125-914622:1:exon

LOC125487410
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487410
product: histone acetyltransferase type B catalytic subunit-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618825.1
SIO_010081: LOC125487410
subclass of: SO_0000673
so part of: LOC125487410
location: join(884125..884151,897172..897450,905144..905317,913480..913596,913886..914622)
location: region:884125-914622:1
so has part: feature:884125-884151:1:exon
so has part: feature:897172-897450:1:exon
so has part: feature:905144-905317:1:exon
so has part: feature:913480-913596:1:exon
so has part: feature:913886-914622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:884125-884151:1:exon

position:884151:1
position: 884151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:897172-897450:1:exon

position:897172:1
position: 897172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897450:1
position: 897450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:905144-905317:1:exon

position:905144:1
position: 905144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905317:1
position: 905317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:913480-913596:1:exon

position:913480:1
position: 913480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913596:1
position: 913596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:913886-914622:1:exon

position:913886:1
position: 913886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487410
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase type B catalytic subunit-like
translation: MDESTKPSQCQRQLIRQDGNASKVRSSADAGLLVQEQALLVSSRQQQSQGCLVAVGPKQGFLVSGSSSGAGDSRLLGECGFSGVSKVGQAARHWQSLFHLLKGVCFGISAEEPSEDFVKLRDFVLAKLCQELQAFAPEKLKKGFSAEMIEEARRTWKINKHHSRRVYEILRLRVTNMSDPVQSSEYRLDVKRRLAIPFKKNKKEATRLSRLMPEDWLAQQAEMSVSQEQEYLEETYQTTVEQYRRILERLARV
SIO_010081: LOC125487410
subclass of: SO_0000673
so part of: LOC125487410
location: join(884125..884151,897172..897450,905144..905317,913480..913596,913886..914050)
location: region:884125-914050:1
so has part: feature:884125-884151:1:exon
so has part: feature:897172-897450:1:exon
so has part: feature:905144-905317:1:exon
so has part: feature:913480-913596:1:exon
so has part: feature:913886-914050:1:exon

XP_048474782.1
type: Protein
SIO_000068: ncbiprotein

position:914050:1
position: 914050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884125-884151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897172-897450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905144-905317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913480-913596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913886-914050:1:exon

LOC125487422
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 917233..925815
location: region:917233-925815:1
so has part: feature:917233-925815:1:exon
subclass of: SO_0000011

125487422
type: Gene
SIO_000068: ncbigene

position:917233:1
position: 917233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925815:1
position: 925815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917233-925815:1:exon

LOC125487422
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487422
product: uncharacterized LOC125487422
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007265887.1
SIO_010081: LOC125487422
subclass of: SO_0000673
so part of: LOC125487422
location: join(917233..918813,919057..925815)
location: region:917233-925815:1
so has part: feature:917233-918813:1:exon
so has part: feature:919057-925815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917233-918813:1:exon

position:918813:1
position: 918813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919057-925815:1:exon

position:919057:1
position: 919057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925643
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(928451..938862)
location: region:928451-938862:-1
so has part: feature:928451-938862:-1:exon
subclass of: SO_0000010

109925643
type: Gene
SIO_000068: ncbigene

position:928451:-1
position: 928451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938862:-1
position: 938862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928451-938862:-1:exon

LOC109925643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925643
product: myosin light polypeptide 6-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618888.1
SIO_010081: LOC109925643
subclass of: SO_0000673
so part of: LOC109925643
location: complement(join(928451..928881,931102..931179,935618..935791,936408..936551,938284..938311,938400..938862))
location: region:928451-938862:-1
so has part: feature:938400-938862:-1:exon
so has part: feature:938284-938311:-1:exon
so has part: feature:936408-936551:-1:exon
so has part: feature:935618-935791:-1:exon
so has part: feature:931102-931179:-1:exon
so has part: feature:928451-928881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:938400-938862:-1:exon

position:938400:-1
position: 938400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:938284-938311:-1:exon

position:938284:-1
position: 938284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938311:-1
position: 938311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:936408-936551:-1:exon

position:936408:-1
position: 936408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936551:-1
position: 936551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:935618-935791:-1:exon

position:935618:-1
position: 935618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935791:-1
position: 935791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:931102-931179:-1:exon

position:931102:-1
position: 931102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931179:-1
position: 931179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:928451-928881:-1:exon

position:928881:-1
position: 928881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109925643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925643
product: myosin light polypeptide 6-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618889.1
SIO_010081: LOC109925643
subclass of: SO_0000673
so part of: LOC109925643
location: complement(join(928451..928881,930277..930318,931102..931179,935618..935791,936408..936551,938284..938311,938400..938507))
location: region:928451-938507:-1
so has part: feature:938400-938507:-1:exon
so has part: feature:938284-938311:-1:exon
so has part: feature:936408-936551:-1:exon
so has part: feature:935618-935791:-1:exon
so has part: feature:931102-931179:-1:exon
so has part: feature:930277-930318:-1:exon
so has part: feature:928451-928881:-1:exon

position:938507:-1
position: 938507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938400-938507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938284-938311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936408-936551:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935618-935791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:931102-931179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930277-930318:-1:exon

position:930277:-1
position: 930277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930318:-1
position: 930318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:928451-928881:-1:exon

LOC109925643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light polypeptide 6-like isoform X1
translation: MCDFTEDQIAEFKEAFYLYDRIGEGRIGYNQFGDVLRALGQNPCNAEVLKVLGNPKPEDMNVKTLDFEQFLPKLQDIARNKEPGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVETLLAGHEDANGCINYEELVRMVMSG
SIO_010081: LOC109925643
subclass of: SO_0000673
so part of: LOC109925643
location: complement(join(928853..928881,931102..931179,935618..935791,936408..936551,938284..938311,938400..938402))
location: region:928853-938402:-1
so has part: feature:938400-938402:-1:exon
so has part: feature:938284-938311:-1:exon
so has part: feature:936408-936551:-1:exon
so has part: feature:935618-935791:-1:exon
so has part: feature:931102-931179:-1:exon
so has part: feature:928853-928881:-1:exon

XP_048474845.1
type: Protein
SIO_000068: ncbiprotein

position:928853:-1
position: 928853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938402:-1
position: 938402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938400-938402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938284-938311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936408-936551:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935618-935791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:931102-931179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928853-928881:-1:exon

LOC109925643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light polypeptide 6-like isoform X2
translation: MCDFTEDQIAEFKEAFYLYDRIGEGRIGYNQFGDVLRALGQNPCNAEVLKVLGNPKPEDMNVKTLDFEQFLPKLQDIARNKEPGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVETLLAGHEDANGCINYEAFVRHIMSG
SIO_010081: LOC109925643
subclass of: SO_0000673
so part of: LOC109925643
location: complement(join(930290..930318,931102..931179,935618..935791,936408..936551,938284..938311,938400..938402))
location: region:930290-938402:-1
so has part: feature:938400-938402:-1:exon
so has part: feature:938284-938311:-1:exon
so has part: feature:936408-936551:-1:exon
so has part: feature:935618-935791:-1:exon
so has part: feature:931102-931179:-1:exon
so has part: feature:930290-930318:-1:exon

XP_048474846.1
type: Protein
SIO_000068: ncbiprotein

position:930290:-1
position: 930290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938400-938402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938284-938311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936408-936551:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935618-935791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:931102-931179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930290-930318:-1:exon

LOC125487421
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 955737..962204
location: region:955737-962204:1
so has part: feature:955737-962204:1:exon
subclass of: SO_0000011

125487421
type: Gene
SIO_000068: ncbigene

position:955737:1
position: 955737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962204:1
position: 962204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955737-962204:1:exon

LOC125487421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487421
product: uncharacterized LOC125487421
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007265886.1
SIO_010081: LOC125487421
subclass of: SO_0000673
so part of: LOC125487421
location: join(955737..956700,956816..956885,962127..962204)
location: region:955737-962204:1
so has part: feature:955737-956700:1:exon
so has part: feature:956816-956885:1:exon
so has part: feature:962127-962204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:955737-956700:1:exon

position:956700:1
position: 956700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:956816-956885:1:exon

position:956816:1
position: 956816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956885:1
position: 956885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:962127-962204:1:exon

position:962127:1
position: 962127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109923049
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 979632..993743
location: region:979632-993743:1
so has part: feature:979632-993743:1:exon
subclass of: SO_0000010

109923049
type: Gene
SIO_000068: ncbigene

position:979632:1
position: 979632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993743:1
position: 993743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979632-993743:1:exon

LOC109923049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923049
product: SWI/SNF complex subunit SMARCC2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618887.1
SIO_010081: LOC109923049
subclass of: SO_0000673
so part of: LOC109923049
location: join(979632..979866,986110..986229,990320..990405,990779..990860,990972..991064,993112..993181,993557..993743)
location: region:979632-993743:1
so has part: feature:979632-979866:1:exon
so has part: feature:986110-986229:1:exon
so has part: feature:990320-990405:1:exon
so has part: feature:990779-990860:1:exon
so has part: feature:990972-991064:1:exon
so has part: feature:993112-993181:1:exon
so has part: feature:993557-993743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979632-979866:1:exon

position:979866:1
position: 979866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:986110-986229:1:exon

position:986110:1
position: 986110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986229:1
position: 986229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:990320-990405:1:exon

position:990320:1
position: 990320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990405:1
position: 990405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:990779-990860:1:exon

position:990779:1
position: 990779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990860:1
position: 990860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:990972-991064:1:exon

position:990972:1
position: 990972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991064:1
position: 991064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:993112-993181:1:exon

position:993112:1
position: 993112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993181:1
position: 993181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:993557-993743:1:exon

position:993557:1
position: 993557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109923049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2-like
translation: MAVRKKDGGPNVKYFEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNNCLSRPNIYINSDIEPKLLSKLKDIIKRHQGTVTEDKSNASHVVYPIPGSTEEDRHS
SIO_010081: LOC109923049
subclass of: SO_0000673
so part of: LOC109923049
location: join(979756..979866,986110..986229,990320..990405,990779..990860,990972..991064,993112..993181,993557..993570)
location: region:979756-993570:1
so has part: feature:979756-979866:1:exon
so has part: feature:986110-986229:1:exon
so has part: feature:990320-990405:1:exon
so has part: feature:990779-990860:1:exon
so has part: feature:990972-991064:1:exon
so has part: feature:993112-993181:1:exon
so has part: feature:993557-993570:1:exon

XP_048474844.1
type: Protein
SIO_000068: ncbiprotein

position:979756:1
position: 979756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993570:1
position: 993570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979756-979866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986110-986229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990320-990405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990779-990860:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990972-991064:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:993112-993181:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:993557-993570:1:exon

LOC109924707
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1079373..1117082)
location: region:1079373-1117082:-1
so has part: feature:1079373-1117082:-1:exon
subclass of: SO_0000010

109924707
type: Gene
SIO_000068: ncbigene

position:1079373:-1
position: 1079373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117082:-1
position: 1117082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079373-1117082:-1:exon

LOC109924707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924707
product: integrin alpha-5-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618826.1
SIO_010081: LOC109924707
subclass of: SO_0000673
so part of: LOC109924707
location: complement(join(1079373..1080678,1081746..1081868,1083481..1083582,1084213..1084326,1091110..1091226,1093489..1093650,1094605..1094710,1095421..1095501,1097116..1097205,1097750..1097938,1098050..1098117,1100465..1100602,1100814..1100968,1102472..1102527,1104404..1104511,1104917..1104962,1106554..1106748,1117049..1117082))
location: region:1079373-1117082:-1
so has part: feature:1117049-1117082:-1:exon
so has part: feature:1106554-1106748:-1:exon
so has part: feature:1104917-1104962:-1:exon
so has part: feature:1104404-1104511:-1:exon
so has part: feature:1102472-1102527:-1:exon
so has part: feature:1100814-1100968:-1:exon
so has part: feature:1100465-1100602:-1:exon
so has part: feature:1098050-1098117:-1:exon
so has part: feature:1097750-1097938:-1:exon
so has part: feature:1097116-1097205:-1:exon
so has part: feature:1095421-1095501:-1:exon
so has part: feature:1094605-1094710:-1:exon
so has part: feature:1093489-1093650:-1:exon
so has part: feature:1091110-1091226:-1:exon
so has part: feature:1084213-1084326:-1:exon
so has part: feature:1083481-1083582:-1:exon
so has part: feature:1081746-1081868:-1:exon
so has part: feature:1079373-1080678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1117049-1117082:-1:exon

position:1117049:-1
position: 1117049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1106554-1106748:-1:exon

position:1106554:-1
position: 1106554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106748:-1
position: 1106748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1104917-1104962:-1:exon

position:1104917:-1
position: 1104917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104962:-1
position: 1104962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1104404-1104511:-1:exon

position:1104404:-1
position: 1104404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104511:-1
position: 1104511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1102472-1102527:-1:exon

position:1102472:-1
position: 1102472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102527:-1
position: 1102527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1100814-1100968:-1:exon

position:1100814:-1
position: 1100814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100968:-1
position: 1100968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1100465-1100602:-1:exon

position:1100465:-1
position: 1100465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100602:-1
position: 1100602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1098050-1098117:-1:exon

position:1098050:-1
position: 1098050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098117:-1
position: 1098117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1097750-1097938:-1:exon

position:1097750:-1
position: 1097750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097938:-1
position: 1097938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1097116-1097205:-1:exon

position:1097116:-1
position: 1097116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097205:-1
position: 1097205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1095421-1095501:-1:exon

position:1095421:-1
position: 1095421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095501:-1
position: 1095501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1094605-1094710:-1:exon

position:1094605:-1
position: 1094605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094710:-1
position: 1094710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1093489-1093650:-1:exon

position:1093489:-1
position: 1093489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093650:-1
position: 1093650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1091110-1091226:-1:exon

position:1091110:-1
position: 1091110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091226:-1
position: 1091226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1084213-1084326:-1:exon

position:1084213:-1
position: 1084213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084326:-1
position: 1084326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1083481-1083582:-1:exon

position:1083481:-1
position: 1083481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083582:-1
position: 1083582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1081746-1081868:-1:exon

position:1081746:-1
position: 1081746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081868:-1
position: 1081868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1079373-1080678:-1:exon

position:1080678:-1
position: 1080678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109924707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-5-like
translation: MRKILGGAHRQDVAVGAPYAGDKSQGLVYIYNGRPDGLNSTPSQILVGMWATTTSVPASFGFAARGATDLDMNGYPDVIVGAFGVDQAVVYRARPIVRASASLKVSPPVFNPEEKGCTINGTDIQVTCINVSFCLSASGKHVPQWIGFKMELELDSLKQKGAIKRVLFLNSRQHLFQDKVIINNGHGEICQDLKVYLREEHEFRDKLSLIQVAMNFSLDPTMPLDNHGLQPILSYSTQEYLTQEAQIQLDCGDDNICVPDLQLSVYGDRKTVYHGDENPLTLIFDARNLGEGGAYEAELYVFVPSEAEYSGIVRNEVRSETDYILNGMTHSAQLSGGLRFTVHQLQGDKKSIEFELQIRSKNLNNSRSDIVPYKMEVEVEAHISTRGAPIPKEIIFATTNPKPRSEPITEEDVGPPLKYVFEVSNNGPSSISHSILHVTCPVHYQKERLLYITDYKTVGPLLNCTASSSLNPLRLKLQSPPAKSARTLNVSSEKTEHSIRRREAARKRLGDLDSLSCQHVECLSLICEVGLLSRGDNVALEIRTRVWARTFLQWQHHPFTLPCNASFQVHSMPYQILPKDYPRGSLVVSTPVMWIKPESSYSVPLWIIILAVLVGLLLLALVIFILYKLGFFERAKLPHGTAMETAHLKPQATSEA
SIO_010081: LOC109924707
subclass of: SO_0000673
so part of: LOC109924707
location: complement(join(1080592..1080678,1081746..1081868,1083481..1083582,1084213..1084326,1091110..1091226,1093489..1093650,1094605..1094710,1095421..1095501,1097116..1097205,1097750..1097938,1098050..1098117,1100465..1100602,1100814..1100968,1102472..1102527,1104404..1104511,1104917..1104962,1106554..1106748,1117049..1117082))
location: region:1080592-1117082:-1
so has part: feature:1117049-1117082:-1:exon
so has part: feature:1106554-1106748:-1:exon
so has part: feature:1104917-1104962:-1:exon
so has part: feature:1104404-1104511:-1:exon
so has part: feature:1102472-1102527:-1:exon
so has part: feature:1100814-1100968:-1:exon
so has part: feature:1100465-1100602:-1:exon
so has part: feature:1098050-1098117:-1:exon
so has part: feature:1097750-1097938:-1:exon
so has part: feature:1097116-1097205:-1:exon
so has part: feature:1095421-1095501:-1:exon
so has part: feature:1094605-1094710:-1:exon
so has part: feature:1093489-1093650:-1:exon
so has part: feature:1091110-1091226:-1:exon
so has part: feature:1084213-1084326:-1:exon
so has part: feature:1083481-1083582:-1:exon
so has part: feature:1081746-1081868:-1:exon
so has part: feature:1080592-1080678:-1:exon

XP_048474783.1
type: Protein
SIO_000068: ncbiprotein

position:1080592:-1
position: 1080592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117049-1117082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106554-1106748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104917-1104962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104404-1104511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1102472-1102527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1100814-1100968:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100465-1100602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1098050-1098117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1097750-1097938:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1097116-1097205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095421-1095501:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1094605-1094710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1093489-1093650:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1091110-1091226:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1084213-1084326:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1083481-1083582:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1081746-1081868:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1080592-1080678:-1:exon

LOC109925934
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1124261..1187638
location: region:1124261-1187638:1
so has part: feature:1124261-1187638:1:exon
subclass of: SO_0000010

109925934
type: Gene
SIO_000068: ncbigene

position:1124261:1
position: 1124261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187638:1
position: 1187638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124261-1187638:1:exon

LOC109925934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925934
product: nck-associated protein 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618993.1
SIO_010081: LOC109925934
subclass of: SO_0000673
so part of: LOC109925934
location: join(1124261..1124475,1129049..1129159,1132561..1132653,1135949..1136005,1138372..1138514,1141987..1142077,1144813..1144950,1146763..1146811,1148726..1148882,1149816..1149872,1152547..1152643,1152941..1153050,1154038..1154170,1155811..1155892,1157936..1157994,1159425..1159570,1161457..1161589,1162819..1162938,1163042..1163181,1164276..1164407,1170268..1170486,1171374..1171504,1172219..1172316,1172681..1172774,1174581..1174663,1177226..1177306,1178880..1178973,1182384..1182497,1183538..1183647,1185655..1185744,1187130..1187638)
location: region:1124261-1187638:1
so has part: feature:1124261-1124475:1:exon
so has part: feature:1129049-1129159:1:exon
so has part: feature:1132561-1132653:1:exon
so has part: feature:1135949-1136005:1:exon
so has part: feature:1138372-1138514:1:exon
so has part: feature:1141987-1142077:1:exon
so has part: feature:1144813-1144950:1:exon
so has part: feature:1146763-1146811:1:exon
so has part: feature:1148726-1148882:1:exon
so has part: feature:1149816-1149872:1:exon
so has part: feature:1152547-1152643:1:exon
so has part: feature:1152941-1153050:1:exon
so has part: feature:1154038-1154170:1:exon
so has part: feature:1155811-1155892:1:exon
so has part: feature:1157936-1157994:1:exon
so has part: feature:1159425-1159570:1:exon
so has part: feature:1161457-1161589:1:exon
so has part: feature:1162819-1162938:1:exon
so has part: feature:1163042-1163181:1:exon
so has part: feature:1164276-1164407:1:exon
so has part: feature:1170268-1170486:1:exon
so has part: feature:1171374-1171504:1:exon
so has part: feature:1172219-1172316:1:exon
so has part: feature:1172681-1172774:1:exon
so has part: feature:1174581-1174663:1:exon
so has part: feature:1177226-1177306:1:exon
so has part: feature:1178880-1178973:1:exon
so has part: feature:1182384-1182497:1:exon
so has part: feature:1183538-1183647:1:exon
so has part: feature:1185655-1185744:1:exon
so has part: feature:1187130-1187638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1124261-1124475:1:exon

position:1124475:1
position: 1124475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1129049-1129159:1:exon

position:1129049:1
position: 1129049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129159:1
position: 1129159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1132561-1132653:1:exon

position:1132561:1
position: 1132561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132653:1
position: 1132653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1135949-1136005:1:exon

position:1135949:1
position: 1135949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136005:1
position: 1136005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1138372-1138514:1:exon

position:1138372:1
position: 1138372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138514:1
position: 1138514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1141987-1142077:1:exon

position:1141987:1
position: 1141987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142077:1
position: 1142077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1144813-1144950:1:exon

position:1144813:1
position: 1144813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144950:1
position: 1144950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1146763-1146811:1:exon

position:1146763:1
position: 1146763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146811:1
position: 1146811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1148726-1148882:1:exon

position:1148726:1
position: 1148726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148882:1
position: 1148882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1149816-1149872:1:exon

position:1149816:1
position: 1149816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149872:1
position: 1149872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1152547-1152643:1:exon

position:1152547:1
position: 1152547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152643:1
position: 1152643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1152941-1153050:1:exon

position:1152941:1
position: 1152941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153050:1
position: 1153050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1154038-1154170:1:exon

position:1154038:1
position: 1154038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154170:1
position: 1154170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1155811-1155892:1:exon

position:1155811:1
position: 1155811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155892:1
position: 1155892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1157936-1157994:1:exon

position:1157936:1
position: 1157936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157994:1
position: 1157994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1159425-1159570:1:exon

position:1159425:1
position: 1159425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159570:1
position: 1159570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1161457-1161589:1:exon

position:1161457:1
position: 1161457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161589:1
position: 1161589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1162819-1162938:1:exon

position:1162819:1
position: 1162819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162938:1
position: 1162938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1163042-1163181:1:exon

position:1163042:1
position: 1163042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163181:1
position: 1163181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1164276-1164407:1:exon

position:1164276:1
position: 1164276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164407:1
position: 1164407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1170268-1170486:1:exon

position:1170268:1
position: 1170268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170486:1
position: 1170486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1171374-1171504:1:exon

position:1171374:1
position: 1171374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171504:1
position: 1171504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1172219-1172316:1:exon

position:1172219:1
position: 1172219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172316:1
position: 1172316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1172681-1172774:1:exon

position:1172681:1
position: 1172681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172774:1
position: 1172774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1174581-1174663:1:exon

position:1174581:1
position: 1174581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174663:1
position: 1174663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1177226-1177306:1:exon

position:1177226:1
position: 1177226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177306:1
position: 1177306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1178880-1178973:1:exon

position:1178880:1
position: 1178880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178973:1
position: 1178973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1182384-1182497:1:exon

position:1182384:1
position: 1182384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182497:1
position: 1182497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1183538-1183647:1:exon

position:1183538:1
position: 1183538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183647:1
position: 1183647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1185655-1185744:1:exon

position:1185655:1
position: 1185655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185744:1
position: 1185744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1187130-1187638:1:exon

position:1187130:1
position: 1187130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 1-like
translation: MSQNLQLKFAEKLSILNDRGRGILVRIYNIKKTCSDPKTKLPYLTEKSMESAIKCIMRKFPAIDIRSNSNHLSSIQKDKSDILKNLTSFYNSFVDVLEFREYVNELLSSMDSYQMYMDINVNYDLTKGYLDLIVTYTSLFFMVSRVDDRKVLLGMYNCAYELSNGSSEPSFPRLGQMLLDYDHPLKKLTEEFTPHWRLLADALLSLQVLFPRRNLPAEQWRSAHMLSVISVPANMLTPAVSETMQCEYLSLEVMERWIIIGFLLCHNSLNLDPACLKLWKEAMQCSLCIELFRDEVLFHHKVTEELFSSMKGYSKRVADIKECREEATSKSGSLHRERRLFLRTTVKELSIILAEEPGLLGPKILFVFMALSFSRDEISWLVRHAENITKTKSPEDYVDSNIAELLFVMEELRGLLYKYKKIIQRYFVLYLAHFDAVVLSETIQNLSVCPEEESVIMSSFVNSLTSLNIKQVENGEEFNFQGFRLDWFRLQAYTSVAKTPLILRENLKLASLMNTIIFHTKLLDNLHGLLEETADLTLFCFYPRLFEKVFSQSIEEPTQLPYLIAFPMVCSHFSSCIHDMCPEEYNVLQKRSLGLCNNFLDEIAKQASGCMIQLCYEQHNLSEKLLPKYTAQTISKAVNKKRKKPVSKKVEPNREKPGIESLRKDRVVDTNMDKHHLTLTEYCIAINYVRELVIFEHTVLPSEYLTSQLEIRLTRAIMQLARYSQATQEIAKPSEVLSGVKAFIAFIHSVGHYVNIDVSRICKDVLLQQSQAIDANGEMTLTTAYTNWYLESLLRQTSTGIIIHSPAVRAFVTIPVENMQIFNAEEYSDVSEMQALAELIGPYGMKHLSEHLMWHITSQVNELKKLVVENMDILAQVKSNLHKPDVMTYHAKRLTSTENVLKRMIIIGVILNFRAMAQEALRDVLSSHIPFLMGSLQILNDVVSPATDIKDLLAIYELTSAAGVSCLVDPALVIALSNQKNEGSTEDDYRLASLLMVYIAVSLPILASDPMSIYNQEHQGHRNNIHCAAKAINEIAAALYTIHKKDVRQHLTEFLAFASMSLLQIGQETDKLLVKNRESIYLLLHMLIEESPFLEMDMLEPYFPYVLLRNAFREVYRPVMMTTG
SIO_010081: LOC109925934
subclass of: SO_0000673
so part of: LOC109925934
location: join(1124380..1124475,1129049..1129159,1132561..1132653,1135949..1136005,1138372..1138514,1141987..1142077,1144813..1144950,1146763..1146811,1148726..1148882,1149816..1149872,1152547..1152643,1152941..1153050,1154038..1154170,1155811..1155892,1157936..1157994,1159425..1159570,1161457..1161589,1162819..1162938,1163042..1163181,1164276..1164407,1170268..1170486,1171374..1171504,1172219..1172316,1172681..1172774,1174581..1174663,1177226..1177306,1178880..1178973,1182384..1182497,1183538..1183647,1185655..1185744,1187130..1187246)
location: region:1124380-1187246:1
so has part: feature:1124380-1124475:1:exon
so has part: feature:1129049-1129159:1:exon
so has part: feature:1132561-1132653:1:exon
so has part: feature:1135949-1136005:1:exon
so has part: feature:1138372-1138514:1:exon
so has part: feature:1141987-1142077:1:exon
so has part: feature:1144813-1144950:1:exon
so has part: feature:1146763-1146811:1:exon
so has part: feature:1148726-1148882:1:exon
so has part: feature:1149816-1149872:1:exon
so has part: feature:1152547-1152643:1:exon
so has part: feature:1152941-1153050:1:exon
so has part: feature:1154038-1154170:1:exon
so has part: feature:1155811-1155892:1:exon
so has part: feature:1157936-1157994:1:exon
so has part: feature:1159425-1159570:1:exon
so has part: feature:1161457-1161589:1:exon
so has part: feature:1162819-1162938:1:exon
so has part: feature:1163042-1163181:1:exon
so has part: feature:1164276-1164407:1:exon
so has part: feature:1170268-1170486:1:exon
so has part: feature:1171374-1171504:1:exon
so has part: feature:1172219-1172316:1:exon
so has part: feature:1172681-1172774:1:exon
so has part: feature:1174581-1174663:1:exon
so has part: feature:1177226-1177306:1:exon
so has part: feature:1178880-1178973:1:exon
so has part: feature:1182384-1182497:1:exon
so has part: feature:1183538-1183647:1:exon
so has part: feature:1185655-1185744:1:exon
so has part: feature:1187130-1187246:1:exon

XP_048474950.1
type: Protein
SIO_000068: ncbiprotein

position:1124380:1
position: 1124380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187246:1
position: 1187246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124380-1124475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1129049-1129159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132561-1132653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1135949-1136005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1138372-1138514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141987-1142077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1144813-1144950:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1146763-1146811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148726-1148882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149816-1149872:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152547-1152643:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1152941-1153050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1154038-1154170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1155811-1155892:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1157936-1157994:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1159425-1159570:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1161457-1161589:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1162819-1162938:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1163042-1163181:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1164276-1164407:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1170268-1170486:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1171374-1171504:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1172219-1172316:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1172681-1172774:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1174581-1174663:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1177226-1177306:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1178880-1178973:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1182384-1182497:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1183538-1183647:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1185655-1185744:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1187130-1187246:1:exon

LOC125487389
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487389
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1245769..1257529
location: region:1245769-1257529:1
so has part: feature:1245769-1257529:1:exon
subclass of: SO_0000011

125487389
type: Gene
SIO_000068: ncbigene

position:1245769:1
position: 1245769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257529:1
position: 1257529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245769-1257529:1:exon

LOC125487389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487389
product: uncharacterized LOC125487389
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007265865.1
SIO_010081: LOC125487389
subclass of: SO_0000673
so part of: LOC125487389
location: join(1245769..1245803,1250704..1250757,1256368..1256440,1257387..1257529)
location: region:1245769-1257529:1
so has part: feature:1245769-1245803:1:exon
so has part: feature:1250704-1250757:1:exon
so has part: feature:1256368-1256440:1:exon
so has part: feature:1257387-1257529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1245769-1245803:1:exon

position:1245803:1
position: 1245803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1250704-1250757:1:exon

position:1250704:1
position: 1250704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250757:1
position: 1250757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1256368-1256440:1:exon

position:1256368:1
position: 1256368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256440:1
position: 1256440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1257387-1257529:1:exon

position:1257387:1
position: 1257387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

os9
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: os9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1280596..1310561)
location: region:1280596-1310561:-1
so has part: feature:1280596-1310561:-1:exon
subclass of: SO_0000010

125487435
type: Gene
SIO_000068: ncbigene

position:1280596:-1
position: 1280596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310561:-1
position: 1310561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1280596-1310561:-1:exon

os9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: os9
product: OS9 endoplasmic reticulum lectin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618968.1
SIO_010081: os9
subclass of: SO_0000673
so part of: os9
location: complement(join(1280596..1281744,1283881..1283993,1287098..1287271,1290022..1290205,1291318..1291557,1295012..1295097,1295355..1295415,1297169..1297287,1300205..1300369,1302868..1303069,1305404..1305502,1307734..1307810,1309234..1309297,1310388..1310561))
location: region:1280596-1310561:-1
so has part: feature:1310388-1310561:-1:exon
so has part: feature:1309234-1309297:-1:exon
so has part: feature:1307734-1307810:-1:exon
so has part: feature:1305404-1305502:-1:exon
so has part: feature:1302868-1303069:-1:exon
so has part: feature:1300205-1300369:-1:exon
so has part: feature:1297169-1297287:-1:exon
so has part: feature:1295355-1295415:-1:exon
so has part: feature:1295012-1295097:-1:exon
so has part: feature:1291318-1291557:-1:exon
so has part: feature:1290022-1290205:-1:exon
so has part: feature:1287098-1287271:-1:exon
so has part: feature:1283881-1283993:-1:exon
so has part: feature:1280596-1281744:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1310388-1310561:-1:exon

position:1310388:-1
position: 1310388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1309234-1309297:-1:exon

position:1309234:-1
position: 1309234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309297:-1
position: 1309297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1307734-1307810:-1:exon

position:1307734:-1
position: 1307734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307810:-1
position: 1307810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1305404-1305502:-1:exon

position:1305404:-1
position: 1305404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305502:-1
position: 1305502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1302868-1303069:-1:exon

position:1302868:-1
position: 1302868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1303069:-1
position: 1303069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1300205-1300369:-1:exon

position:1300205:-1
position: 1300205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300369:-1
position: 1300369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1297169-1297287:-1:exon

position:1297169:-1
position: 1297169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297287:-1
position: 1297287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1295355-1295415:-1:exon

position:1295355:-1
position: 1295355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295415:-1
position: 1295415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1295012-1295097:-1:exon

position:1295012:-1
position: 1295012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295097:-1
position: 1295097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1291318-1291557:-1:exon

position:1291318:-1
position: 1291318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291557:-1
position: 1291557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1290022-1290205:-1:exon

position:1290022:-1
position: 1290022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290205:-1
position: 1290205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1287098-1287271:-1:exon

position:1287098:-1
position: 1287098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287271:-1
position: 1287271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1283881-1283993:-1:exon

position:1283881:-1
position: 1283881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283993:-1
position: 1283993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1280596-1281744:-1:exon

position:1281744:-1
position: 1281744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

os9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: os9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein OS-9
translation: MYECRLPAQALKFQQEAEDETQSYSGLGISELLKPMHAAPCLVKTKDWWTYEFCYGQHIKQYHTEDSEVKGDVMYLGFYESEFDWNNETAKASKQHKLKRYHSQTYVNGSKCDLNEKPREAEVRFMCEEGSGDYIARVDEPQSCNYVLTIHTTRICHHPYLRPAIVAKPQPIKCQPALSPEQYVEYVKAQVTDTKRKVEKISEELKTLDEMLLKDQSAQTDEENDLTQEPENQTEEFSDTGENESEGIETLNSQVTEDEDNGEKFWNKISKPVTEEGPLSEERLEEAETKLSDAVKTGDDNLQGDQGKQKVQFRITRHPEDLLKLIRELKDQPTKRKGDEDKDPTTDTSAGSPEKPTDQNLSGKQEEMIDSEENELIKDFEKELEDVSLPKSKMSEIKREVKEEMEKEFENLIDEAQDELEAEGLKGEFDRNQASKTLATTLNKLIDKLEEKEDAHGEEDSDTAKGSPSHASKQTEETDEETEGHVKVRVTKINPGSPLHKEMKVREMSGTDPQLRQIQNVVKEQLEKAGLKAEGKIEVKIVTTGSLGDDDDMHWLSEEDTKSFRELLINLLTGGTEEVYKEQQRQQQLEDNYRFVWGESQEEAQSSSSTDSDDMDF
SIO_010081: os9
subclass of: SO_0000673
so part of: os9
location: complement(join(1281607..1281744,1283881..1283993,1287098..1287271,1290022..1290205,1291318..1291557,1295012..1295097,1295355..1295415,1297169..1297287,1300205..1300369,1302868..1303069,1305404..1305502,1307734..1307810,1309234..1309297,1310388..1310519))
location: region:1281607-1310519:-1
so has part: feature:1310388-1310519:-1:exon
so has part: feature:1309234-1309297:-1:exon
so has part: feature:1307734-1307810:-1:exon
so has part: feature:1305404-1305502:-1:exon
so has part: feature:1302868-1303069:-1:exon
so has part: feature:1300205-1300369:-1:exon
so has part: feature:1297169-1297287:-1:exon
so has part: feature:1295355-1295415:-1:exon
so has part: feature:1295012-1295097:-1:exon
so has part: feature:1291318-1291557:-1:exon
so has part: feature:1290022-1290205:-1:exon
so has part: feature:1287098-1287271:-1:exon
so has part: feature:1283881-1283993:-1:exon
so has part: feature:1281607-1281744:-1:exon

XP_048474925.1
type: Protein
SIO_000068: ncbiprotein

position:1281607:-1
position: 1281607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310519:-1
position: 1310519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310388-1310519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1309234-1309297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1307734-1307810:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305404-1305502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1302868-1303069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1300205-1300369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1297169-1297287:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295355-1295415:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295012-1295097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1291318-1291557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290022-1290205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1287098-1287271:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283881-1283993:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1281607-1281744:-1:exon

LOC109924102
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1378364..1500876
location: region:1378364-1500876:1
so has part: feature:1378364-1500876:1:exon
subclass of: SO_0000010

109924102
type: Gene
SIO_000068: ncbigene

position:1378364:1
position: 1378364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500876:1
position: 1500876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378364-1500876:1:exon

LOC109924102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924102
product: beta-1,4 N-acetylgalactosaminyltransferase 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618827.1
SIO_010081: LOC109924102
subclass of: SO_0000673
so part of: LOC109924102
location: join(1378364..1378551,1396053..1396103,1463481..1463696,1465453..1465660,1472481..1472661,1484579..1484766,1496587..1496727,1498688..1498925,1500118..1500876)
location: region:1378364-1500876:1
so has part: feature:1378364-1378551:1:exon
so has part: feature:1396053-1396103:1:exon
so has part: feature:1463481-1463696:1:exon
so has part: feature:1465453-1465660:1:exon
so has part: feature:1472481-1472661:1:exon
so has part: feature:1484579-1484766:1:exon
so has part: feature:1496587-1496727:1:exon
so has part: feature:1498688-1498925:1:exon
so has part: feature:1500118-1500876:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378364-1378551:1:exon

position:1378551:1
position: 1378551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1396053-1396103:1:exon

position:1396053:1
position: 1396053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396103:1
position: 1396103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1463481-1463696:1:exon

position:1463481:1
position: 1463481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463696:1
position: 1463696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1465453-1465660:1:exon

position:1465453:1
position: 1465453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465660:1
position: 1465660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1472481-1472661:1:exon

position:1472481:1
position: 1472481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472661:1
position: 1472661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1484579-1484766:1:exon

position:1484579:1
position: 1484579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484766:1
position: 1484766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1496587-1496727:1:exon

position:1496587:1
position: 1496587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496727:1
position: 1496727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1498688-1498925:1:exon

position:1498688:1
position: 1498688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498925:1
position: 1498925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1500118-1500876:1:exon

position:1500118:1
position: 1500118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,4 N-acetylgalactosaminyltransferase 1-like
translation: MSMRPVRKPLCCLLLVTLPLGIFFLCLWSLKPYRVVDVKYRFPGISENLLERGLWEPSDKYAHISYRVKEIVAGLLPKNGCQCEKEEPMINLPFTKHLFRQVSVQQFEQVFKEDEREDLKKRREQEYQHFLQRYMFLSSTKSDVNLTATLGTFDVAAEVDKVMIEGEGAMHMSLSSSQLDNLNRQLQFVTYSNTVFNPNTADTGYNISALVTIATKTFLRYDKLRELISSVRKYYPNVTIVIADDSGKPQKVEGDFIEQYFMPFKKGWFAGRNLAISQVKTKYLLWVDDDFIFAADTKLEKMVDILEKTTLDIVGGSVREVTTYSATFLHKLSVEAGREEGDCLKIRQGYYHAVEGFPNCVVTDAIINFFMARTEKMQQVGFDPHLTRQGHLEFFVDGLGLLHVGSCSDVMIDHASKITLPWTKKTQNEILYQKLRYIQASETDSNLQNKLFYFKNRFKCIRSS
SIO_010081: LOC109924102
subclass of: SO_0000673
so part of: LOC109924102
location: join(1396099..1396103,1463481..1463696,1465453..1465660,1472481..1472661,1484579..1484766,1496587..1496727,1498688..1498925,1500118..1500335)
location: region:1396099-1500335:1
so has part: feature:1396099-1396103:1:exon
so has part: feature:1463481-1463696:1:exon
so has part: feature:1465453-1465660:1:exon
so has part: feature:1472481-1472661:1:exon
so has part: feature:1484579-1484766:1:exon
so has part: feature:1496587-1496727:1:exon
so has part: feature:1498688-1498925:1:exon
so has part: feature:1500118-1500335:1:exon

XP_048474784.1
type: Protein
SIO_000068: ncbiprotein

position:1396099:1
position: 1396099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500335:1
position: 1500335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1396099-1396103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463481-1463696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465453-1465660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1472481-1472661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1484579-1484766:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496587-1496727:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1498688-1498925:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1500118-1500335:1:exon

b4galnt1b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: b4galnt1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1430826..1448382
location: region:1430826-1448382:1
so has part: feature:1430826-1448382:1:exon
subclass of: SO_0000010

109925717
type: Gene
SIO_000068: ncbigene

position:1430826:1
position: 1430826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448382:1
position: 1448382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430826-1448382:1:exon

b4galnt1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: b4galnt1b
product: beta-1,4-N-acetyl-galactosaminyl transferase 1b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048619008.1
SIO_010081: b4galnt1b
subclass of: SO_0000673
so part of: b4galnt1b
location: join(1430826..1431138,1431943..1432035,1435637..1435824,1438448..1438588,1445097..1445334,1447501..1448382)
location: region:1430826-1448382:1
so has part: feature:1430826-1431138:1:exon
so has part: feature:1431943-1432035:1:exon
so has part: feature:1435637-1435824:1:exon
so has part: feature:1438448-1438588:1:exon
so has part: feature:1445097-1445334:1:exon
so has part: feature:1447501-1448382:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1430826-1431138:1:exon

position:1431138:1
position: 1431138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1431943-1432035:1:exon

position:1431943:1
position: 1431943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432035:1
position: 1432035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1435637-1435824:1:exon

position:1435637:1
position: 1435637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435824:1
position: 1435824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1438448-1438588:1:exon

position:1438448:1
position: 1438448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438588:1
position: 1438588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1445097-1445334:1:exon

position:1445097:1
position: 1445097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445334:1
position: 1445334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1447501-1448382:1:exon

position:1447501:1
position: 1447501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b4galnt1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: b4galnt1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,4 N-acetylgalactosaminyltransferase 1
translation: MSCAFSPPQEPTLGAEVRRRARLLGEGLTNMTPLTIHRIPPNPKHCSAYTQHSISNLDRILNELRNSGPPRLPTDYFSSKTQSVKDSDKIQMLFVKAILLTGKSVQLETDGHQAFFVIKIRHATIPKLYSSEDQPGYNISALVTIATKTFLRYDKLRELISSVRKYYPNVTIVIADDSDKPQKIEGDFIEQYFMPFGKGWFAGRNLAISQVTTKYLLWVDDDFIFTANTKLEKLVNILEKTTLDLVGGAVREKTGFATTFRHQISVEQGGEEGDCLHTRMGHYHVLRGFPNCVVTDGVVNFFLARTDKVQRVGFDPRLTRVAHSEFFIDGLGILHVGSCDDVTVDHATKIKLPWSSVDENEKTYKEFRYPKSSEANVQLKHRLFYLKNRFKCMVKD
SIO_010081: b4galnt1b
subclass of: SO_0000673
so part of: b4galnt1b
location: join(1430826..1431138,1431943..1432035,1435637..1435824,1438448..1438588,1445097..1445334,1447501..1447718)
location: region:1430826-1447718:1
so has part: feature:1430826-1431138:1:exon
so has part: feature:1431943-1432035:1:exon
so has part: feature:1435637-1435824:1:exon
so has part: feature:1438448-1438588:1:exon
so has part: feature:1445097-1445334:1:exon
so has part: feature:1447501-1447718:1:exon

XP_048474965.1
type: Protein
SIO_000068: ncbiprotein

position:1447718:1
position: 1447718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430826-1431138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1431943-1432035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1435637-1435824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438448-1438588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1445097-1445334:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1447501-1447718:1:exon

LOC125487400
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1506810..1516650
location: region:1506810-1516650:1
so has part: feature:1506810-1516650:1:exon
subclass of: SO_0000011

125487400
type: Gene
SIO_000068: ncbigene

position:1506810:1
position: 1506810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1516650:1
position: 1516650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506810-1516650:1:exon

LOC125487400
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487400
product: uncharacterized LOC125487400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_007265874.1
SIO_010081: LOC125487400
subclass of: SO_0000673
so part of: LOC125487400
location: join(1506810..1506918,1510641..1510678,1516640..1516650)
location: region:1506810-1516650:1
so has part: feature:1506810-1506918:1:exon
so has part: feature:1510641-1510678:1:exon
so has part: feature:1516640-1516650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1506810-1506918:1:exon

position:1506918:1
position: 1506918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1510641-1510678:1:exon

position:1510641:1
position: 1510641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510678:1
position: 1510678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1516640-1516650:1:exon

position:1516640:1
position: 1516640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487447
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1569227..1572529)
location: region:1569227-1572529:-1
so has part: feature:1569227-1572529:-1:exon
subclass of: SO_0000011

125487447
type: Gene
SIO_000068: ncbigene

position:1569227:-1
position: 1569227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572529:-1
position: 1572529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569227-1572529:-1:exon

LOC125487447
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487447
product: uncharacterized LOC125487447
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007265902.1
SIO_010081: LOC125487447
subclass of: SO_0000673
so part of: LOC125487447
location: complement(join(1569227..1569597,1572368..1572529))
location: region:1569227-1572529:-1
so has part: feature:1572368-1572529:-1:exon
so has part: feature:1569227-1569597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572368-1572529:-1:exon

position:1572368:-1
position: 1572368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1569227-1569597:-1:exon

position:1569597:-1
position: 1569597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926210
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1572204..1585709
location: region:1572204-1585709:1
so has part: feature:1572204-1585709:1:exon
subclass of: SO_0000010

109926210
type: Gene
SIO_000068: ncbigene

position:1572204:1
position: 1572204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585709:1
position: 1585709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572204-1585709:1:exon

LOC109926210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926210
product: transcription factor Sp5-like, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619026.1
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: join(1572204..1572406,1581516..1581655,1583831..1585709)
location: region:1572204-1585709:1
so has part: feature:1572204-1572406:1:exon
so has part: feature:1581516-1581655:1:exon
so has part: feature:1583831-1585709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572204-1572406:1:exon

position:1572406:1
position: 1572406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1581516-1581655:1:exon

position:1581516:1
position: 1581516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581655:1
position: 1581655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1583831-1585709:1:exon

position:1583831:1
position: 1583831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926210
product: transcription factor Sp5-like, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619027.1
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: join(1572204..1572406,1583831..1585709)
location: region:1572204-1585709:1
so has part: feature:1572204-1572406:1:exon
so has part: feature:1583831-1585709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572204-1572406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1583831-1585709:1:exon

LOC109926210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926210
product: transcription factor Sp5-like, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619024.1
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: join(1572604..1572944,1579887..1580012,1581516..1581655,1583831..1585709)
location: region:1572604-1585709:1
so has part: feature:1572604-1572944:1:exon
so has part: feature:1579887-1580012:1:exon
so has part: feature:1581516-1581655:1:exon
so has part: feature:1583831-1585709:1:exon

position:1572604:1
position: 1572604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572604-1572944:1:exon

position:1572944:1
position: 1572944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1579887-1580012:1:exon

position:1579887:1
position: 1579887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580012:1
position: 1580012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1581516-1581655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1583831-1585709:1:exon

LOC109926210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926210
product: transcription factor Sp5-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619020.1
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: join(1572604..1572944,1581516..1581655,1583831..1585709)
location: region:1572604-1585709:1
so has part: feature:1572604-1572944:1:exon
so has part: feature:1581516-1581655:1:exon
so has part: feature:1583831-1585709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572604-1572944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581516-1581655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1583831-1585709:1:exon

LOC109926210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926210
product: transcription factor Sp5-like, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619023.1
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: join(1572604..1572944,1581527..1581655,1583831..1585709)
location: region:1572604-1585709:1
so has part: feature:1572604-1572944:1:exon
so has part: feature:1581527-1581655:1:exon
so has part: feature:1583831-1585709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572604-1572944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581527-1581655:1:exon

position:1581527:1
position: 1581527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1583831-1585709:1:exon

LOC109926210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926210
product: transcription factor Sp5-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619019.1
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: join(1572604..1572944,1583831..1585709)
location: region:1572604-1585709:1
so has part: feature:1572604-1572944:1:exon
so has part: feature:1583831-1585709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572604-1572944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1583831-1585709:1:exon

LOC109926210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926210
product: transcription factor Sp5-like, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619025.1
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: join(1573597..1573825,1579887..1580012,1581516..1581655,1583831..1585709)
location: region:1573597-1585709:1
so has part: feature:1573597-1573825:1:exon
so has part: feature:1579887-1580012:1:exon
so has part: feature:1581516-1581655:1:exon
so has part: feature:1583831-1585709:1:exon

position:1573597:1
position: 1573597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573597-1573825:1:exon

position:1573825:1
position: 1573825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1579887-1580012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1581516-1581655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1583831-1585709:1:exon

LOC109926210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926210
product: transcription factor Sp5-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619022.1
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: join(1573597..1573825,1581516..1581655,1583831..1585709)
location: region:1573597-1585709:1
so has part: feature:1573597-1573825:1:exon
so has part: feature:1581516-1581655:1:exon
so has part: feature:1583831-1585709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1573597-1573825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581516-1581655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1583831-1585709:1:exon

LOC109926210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926210
product: transcription factor Sp5-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619021.1
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: join(1573597..1573825,1583831..1585709)
location: region:1573597-1585709:1
so has part: feature:1573597-1573825:1:exon
so has part: feature:1583831-1585709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1573597-1573825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1583831-1585709:1:exon

LOC109926210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp5-like
translation: MLAATCGRVRTTSADIPPFQYDPSMESAPGMFQFWSNEAFGGSRTMSFSPPKAQYSCGTAPSALGSHELPLTPPAESVYTFELSSMKILTTSVPASCAYSYPDTANGIAPNFSNFISSSSALQSRHVSPNHADEIPWWSMQQPDPLHLHHLQFGRPLIPGHQTQLPTALQSSSKSLVNCSRRCRRCRCPNCQSPNNSGEKGKKKQHICHIPGCGKVYGKTSHLKAHLRWHAGERPFVCNWLLCGKSFTRSDELQRHLRTHTGEKRFCCQECGKRFMRSDHLSKHTKTHQNKRLKHTSTTLENIKKE
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: 1583875..1584795
location: region:1583875-1584795:1
so has part: feature:1583875-1584795:1:exon

XP_048474976.1
type: Protein
SIO_000068: ncbiprotein

position:1583875:1
position: 1583875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584795:1
position: 1584795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583875-1584795:1:exon

LOC109926210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp5-like
translation: MLAATCGRVRTTSADIPPFQYDPSMESAPGMFQFWSNEAFGGSRTMSFSPPKAQYSCGTAPSALGSHELPLTPPAESVYTFELSSMKILTTSVPASCAYSYPDTANGIAPNFSNFISSSSALQSRHVSPNHADEIPWWSMQQPDPLHLHHLQFGRPLIPGHQTQLPTALQSSSKSLVNCSRRCRRCRCPNCQSPNNSGEKGKKKQHICHIPGCGKVYGKTSHLKAHLRWHAGERPFVCNWLLCGKSFTRSDELQRHLRTHTGEKRFCCQECGKRFMRSDHLSKHTKTHQNKRLKHTSTTLENIKKE
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: 1583875..1584795
location: region:1583875-1584795:1
so has part: feature:1583875-1584795:1:exon

XP_048474977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583875-1584795:1:exon

LOC109926210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp5-like
translation: MLAATCGRVRTTSADIPPFQYDPSMESAPGMFQFWSNEAFGGSRTMSFSPPKAQYSCGTAPSALGSHELPLTPPAESVYTFELSSMKILTTSVPASCAYSYPDTANGIAPNFSNFISSSSALQSRHVSPNHADEIPWWSMQQPDPLHLHHLQFGRPLIPGHQTQLPTALQSSSKSLVNCSRRCRRCRCPNCQSPNNSGEKGKKKQHICHIPGCGKVYGKTSHLKAHLRWHAGERPFVCNWLLCGKSFTRSDELQRHLRTHTGEKRFCCQECGKRFMRSDHLSKHTKTHQNKRLKHTSTTLENIKKE
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: 1583875..1584795
location: region:1583875-1584795:1
so has part: feature:1583875-1584795:1:exon

XP_048474978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583875-1584795:1:exon

LOC109926210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp5-like
translation: MLAATCGRVRTTSADIPPFQYDPSMESAPGMFQFWSNEAFGGSRTMSFSPPKAQYSCGTAPSALGSHELPLTPPAESVYTFELSSMKILTTSVPASCAYSYPDTANGIAPNFSNFISSSSALQSRHVSPNHADEIPWWSMQQPDPLHLHHLQFGRPLIPGHQTQLPTALQSSSKSLVNCSRRCRRCRCPNCQSPNNSGEKGKKKQHICHIPGCGKVYGKTSHLKAHLRWHAGERPFVCNWLLCGKSFTRSDELQRHLRTHTGEKRFCCQECGKRFMRSDHLSKHTKTHQNKRLKHTSTTLENIKKE
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: 1583875..1584795
location: region:1583875-1584795:1
so has part: feature:1583875-1584795:1:exon

XP_048474979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583875-1584795:1:exon

LOC109926210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp5-like
translation: MLAATCGRVRTTSADIPPFQYDPSMESAPGMFQFWSNEAFGGSRTMSFSPPKAQYSCGTAPSALGSHELPLTPPAESVYTFELSSMKILTTSVPASCAYSYPDTANGIAPNFSNFISSSSALQSRHVSPNHADEIPWWSMQQPDPLHLHHLQFGRPLIPGHQTQLPTALQSSSKSLVNCSRRCRRCRCPNCQSPNNSGEKGKKKQHICHIPGCGKVYGKTSHLKAHLRWHAGERPFVCNWLLCGKSFTRSDELQRHLRTHTGEKRFCCQECGKRFMRSDHLSKHTKTHQNKRLKHTSTTLENIKKE
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: 1583875..1584795
location: region:1583875-1584795:1
so has part: feature:1583875-1584795:1:exon

XP_048474980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583875-1584795:1:exon

LOC109926210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp5-like
translation: MLAATCGRVRTTSADIPPFQYDPSMESAPGMFQFWSNEAFGGSRTMSFSPPKAQYSCGTAPSALGSHELPLTPPAESVYTFELSSMKILTTSVPASCAYSYPDTANGIAPNFSNFISSSSALQSRHVSPNHADEIPWWSMQQPDPLHLHHLQFGRPLIPGHQTQLPTALQSSSKSLVNCSRRCRRCRCPNCQSPNNSGEKGKKKQHICHIPGCGKVYGKTSHLKAHLRWHAGERPFVCNWLLCGKSFTRSDELQRHLRTHTGEKRFCCQECGKRFMRSDHLSKHTKTHQNKRLKHTSTTLENIKKE
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: 1583875..1584795
location: region:1583875-1584795:1
so has part: feature:1583875-1584795:1:exon

XP_048474981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583875-1584795:1:exon

LOC109926210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp5-like
translation: MLAATCGRVRTTSADIPPFQYDPSMESAPGMFQFWSNEAFGGSRTMSFSPPKAQYSCGTAPSALGSHELPLTPPAESVYTFELSSMKILTTSVPASCAYSYPDTANGIAPNFSNFISSSSALQSRHVSPNHADEIPWWSMQQPDPLHLHHLQFGRPLIPGHQTQLPTALQSSSKSLVNCSRRCRRCRCPNCQSPNNSGEKGKKKQHICHIPGCGKVYGKTSHLKAHLRWHAGERPFVCNWLLCGKSFTRSDELQRHLRTHTGEKRFCCQECGKRFMRSDHLSKHTKTHQNKRLKHTSTTLENIKKE
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: 1583875..1584795
location: region:1583875-1584795:1
so has part: feature:1583875-1584795:1:exon

XP_048474982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583875-1584795:1:exon

LOC109926210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp5-like
translation: MLAATCGRVRTTSADIPPFQYDPSMESAPGMFQFWSNEAFGGSRTMSFSPPKAQYSCGTAPSALGSHELPLTPPAESVYTFELSSMKILTTSVPASCAYSYPDTANGIAPNFSNFISSSSALQSRHVSPNHADEIPWWSMQQPDPLHLHHLQFGRPLIPGHQTQLPTALQSSSKSLVNCSRRCRRCRCPNCQSPNNSGEKGKKKQHICHIPGCGKVYGKTSHLKAHLRWHAGERPFVCNWLLCGKSFTRSDELQRHLRTHTGEKRFCCQECGKRFMRSDHLSKHTKTHQNKRLKHTSTTLENIKKE
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: 1583875..1584795
location: region:1583875-1584795:1
so has part: feature:1583875-1584795:1:exon

XP_048474983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583875-1584795:1:exon

LOC109926210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp5-like
translation: MLAATCGRVRTTSADIPPFQYDPSMESAPGMFQFWSNEAFGGSRTMSFSPPKAQYSCGTAPSALGSHELPLTPPAESVYTFELSSMKILTTSVPASCAYSYPDTANGIAPNFSNFISSSSALQSRHVSPNHADEIPWWSMQQPDPLHLHHLQFGRPLIPGHQTQLPTALQSSSKSLVNCSRRCRRCRCPNCQSPNNSGEKGKKKQHICHIPGCGKVYGKTSHLKAHLRWHAGERPFVCNWLLCGKSFTRSDELQRHLRTHTGEKRFCCQECGKRFMRSDHLSKHTKTHQNKRLKHTSTTLENIKKE
SIO_010081: LOC109926210
subclass of: SO_0000673
so part of: LOC109926210
location: 1583875..1584795
location: region:1583875-1584795:1
so has part: feature:1583875-1584795:1:exon

XP_048474984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583875-1584795:1:exon

LOC109926017
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1598787..1628166
location: region:1598787-1628166:1
so has part: feature:1598787-1628166:1:exon
subclass of: SO_0000010

109926017
type: Gene
SIO_000068: ncbigene

position:1598787:1
position: 1598787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628166:1
position: 1628166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598787-1628166:1:exon

LOC109926017
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926017
product: Golgi reassembly-stacking protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618828.1
SIO_010081: LOC109926017
subclass of: SO_0000673
so part of: LOC109926017
location: join(1598787..1599000,1605666..1605746,1608250..1608453,1610291..1610377,1612236..1612366,1615300..1615411,1618662..1618782,1626499..1626588,1628159..1628166)
location: region:1598787-1628166:1
so has part: feature:1598787-1599000:1:exon
so has part: feature:1605666-1605746:1:exon
so has part: feature:1608250-1608453:1:exon
so has part: feature:1610291-1610377:1:exon
so has part: feature:1612236-1612366:1:exon
so has part: feature:1615300-1615411:1:exon
so has part: feature:1618662-1618782:1:exon
so has part: feature:1626499-1626588:1:exon
so has part: feature:1628159-1628166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1598787-1599000:1:exon

position:1599000:1
position: 1599000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1605666-1605746:1:exon

position:1605666:1
position: 1605666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605746:1
position: 1605746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1608250-1608453:1:exon

position:1608250:1
position: 1608250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608453:1
position: 1608453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1610291-1610377:1:exon

position:1610291:1
position: 1610291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610377:1
position: 1610377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1612236-1612366:1:exon

position:1612236:1
position: 1612236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1612366:1
position: 1612366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1615300-1615411:1:exon

position:1615300:1
position: 1615300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615411:1
position: 1615411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1618662-1618782:1:exon

position:1618662:1
position: 1618662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618782:1
position: 1618782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1626499-1626588:1:exon

position:1626499:1
position: 1626499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626588:1
position: 1626588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1628159-1628166:1:exon

position:1628159:1
position: 1628159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi reassembly-stacking protein 2-like
translation: MGSSQSATLPGGRTGGFHVLRVQENSPGYWAGLEPFFDFIISAGDTRLDKDDNALRDLLLGHVEKSLKMAIYNTKTQAVREVSATPSNLWGGQGLLGVSIRFCSFEGANENVWHVLEVEPNSPAALAGLRPYTDYIIGAEAILRESEDLFSLIESHNGKPLKIYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPIHKHLSERKLSPVLRTSLPSSPMVPFSAPSAPAMSNMPSGLPKELSDLRLGTTSPSVTGTFTPASVGVPLFPAPLSEPFTVSLANATITTTVPGM
SIO_010081: LOC109926017
subclass of: SO_0000673
so part of: LOC109926017
location: join(1598938..1599000,1605666..1605746,1608250..1608453,1610291..1610377,1612236..1612366,1615300..1615411,1618662..1618782,1626499..1626588,1628159..1628166)
location: region:1598938-1628166:1
so has part: feature:1598938-1599000:1:exon
so has part: feature:1605666-1605746:1:exon
so has part: feature:1608250-1608453:1:exon
so has part: feature:1610291-1610377:1:exon
so has part: feature:1612236-1612366:1:exon
so has part: feature:1615300-1615411:1:exon
so has part: feature:1618662-1618782:1:exon
so has part: feature:1626499-1626588:1:exon
so has part: feature:1628159-1628166:1:exon

XP_048474785.1
type: Protein
SIO_000068: ncbiprotein

position:1598938:1
position: 1598938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598938-1599000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1605666-1605746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608250-1608453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1610291-1610377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1612236-1612366:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1615300-1615411:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1618662-1618782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1626499-1626588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1628159-1628166:1:exon

LOC109925033
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1652956..1764691)
location: region:1652956-1764691:-1
so has part: feature:1652956-1764691:-1:exon
subclass of: SO_0000010

109925033
type: Gene
SIO_000068: ncbigene

position:1652956:-1
position: 1652956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764691:-1
position: 1764691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1652956-1764691:-1:exon

LOC109925033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925033
product: rho guanine nucleotide exchange factor 25-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618829.1
SIO_010081: LOC109925033
subclass of: SO_0000673
so part of: LOC109925033
location: complement(join(1652956..1655226,1655943..1656187,1662508..1662688,1667367..1667558,1668649..1668726,1672820..1672870,1677445..1677537,1678681..1678770,1678988..1679038,1718844..1718972,1730874..1731166,1764445..1764691))
location: region:1652956-1764691:-1
so has part: feature:1764445-1764691:-1:exon
so has part: feature:1730874-1731166:-1:exon
so has part: feature:1718844-1718972:-1:exon
so has part: feature:1678988-1679038:-1:exon
so has part: feature:1678681-1678770:-1:exon
so has part: feature:1677445-1677537:-1:exon
so has part: feature:1672820-1672870:-1:exon
so has part: feature:1668649-1668726:-1:exon
so has part: feature:1667367-1667558:-1:exon
so has part: feature:1662508-1662688:-1:exon
so has part: feature:1655943-1656187:-1:exon
so has part: feature:1652956-1655226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1764445-1764691:-1:exon

position:1764445:-1
position: 1764445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1730874-1731166:-1:exon

position:1730874:-1
position: 1730874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731166:-1
position: 1731166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1718844-1718972:-1:exon

position:1718844:-1
position: 1718844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718972:-1
position: 1718972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1678988-1679038:-1:exon

position:1678988:-1
position: 1678988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679038:-1
position: 1679038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1678681-1678770:-1:exon

position:1678681:-1
position: 1678681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678770:-1
position: 1678770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1677445-1677537:-1:exon

position:1677445:-1
position: 1677445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677537:-1
position: 1677537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1672820-1672870:-1:exon

position:1672820:-1
position: 1672820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1672870:-1
position: 1672870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1668649-1668726:-1:exon

position:1668649:-1
position: 1668649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1668726:-1
position: 1668726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1667367-1667558:-1:exon

position:1667367:-1
position: 1667367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667558:-1
position: 1667558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1662508-1662688:-1:exon

position:1662508:-1
position: 1662508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1662688:-1
position: 1662688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1655943-1656187:-1:exon

position:1655943:-1
position: 1655943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1656187:-1
position: 1656187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1652956-1655226:-1:exon

position:1655226:-1
position: 1655226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109925033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 25-like
translation: MCCACSAVSSFQAYSRTPHSLHLYGQGASIYTAGWHECQPGSMKGGQQRPGCACQHLFRKVLAKCGCCYRVRESYSVTGSDGSISTSVASIQPQPSTSSAPSSPSSKRSVSTLKKWLTSPVRKLSSGKIDRQVKKLESKPKKAERRKSVDERRRSIDLGIVNKGSEAQDAKGWKDGSLSRRLSRDEQTPAVIPESLTALTDNPKKEMEEQDTAPVATHDAVGLWHKFGEAERRLHMYVVYCQNKPKSEHIVSEYIDTYFEELKQQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYSKKAEQDTTLLEQAVEVMCFVPRRCNDMMNVGRLQGFEGKITAQGKLLQQDTFHVIEQDAGFLSRSKERRVFLFEQIVIFSEPLDKKKGFSLPGYLFKNSIKVSCLGLEETVDNDSCKFALTSRGTDGNVVRYVLQATIPEIRQAWVSNVSQILETQRNFLNALQSPIEYQRRENKSNSLGRPRDARTALSISAGMRPHSSASMDRNQFPSMKAYNTSLPTLFLPPCRTGSATLETNKLPGQGKDSQDGNSTKVDAAGHKHRSQDKLDESKQ
SIO_010081: LOC109925033
subclass of: SO_0000673
so part of: LOC109925033
location: complement(join(1655140..1655226,1655943..1656187,1662508..1662688,1667367..1667558,1668649..1668726,1672820..1672870,1677445..1677537,1678681..1678770,1678988..1679038,1718844..1718972,1730874..1731166,1764445..1764661))
location: region:1655140-1764661:-1
so has part: feature:1764445-1764661:-1:exon
so has part: feature:1730874-1731166:-1:exon
so has part: feature:1718844-1718972:-1:exon
so has part: feature:1678988-1679038:-1:exon
so has part: feature:1678681-1678770:-1:exon
so has part: feature:1677445-1677537:-1:exon
so has part: feature:1672820-1672870:-1:exon
so has part: feature:1668649-1668726:-1:exon
so has part: feature:1667367-1667558:-1:exon
so has part: feature:1662508-1662688:-1:exon
so has part: feature:1655943-1656187:-1:exon
so has part: feature:1655140-1655226:-1:exon

XP_048474786.1
type: Protein
SIO_000068: ncbiprotein

position:1655140:-1
position: 1655140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764661:-1
position: 1764661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764445-1764661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1730874-1731166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1718844-1718972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1678988-1679038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1678681-1678770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1677445-1677537:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1672820-1672870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1668649-1668726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1667367-1667558:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1662508-1662688:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1655943-1656187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1655140-1655226:-1:exon

LOC109924537
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1853285..1889842)
location: region:1853285-1889842:-1
so has part: feature:1853285-1889842:-1:exon
subclass of: SO_0000010

109924537
type: Gene
SIO_000068: ncbigene

position:1853285:-1
position: 1853285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1889842:-1
position: 1889842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1853285-1889842:-1:exon

LOC109924537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924537
product: nuclear receptor subfamily 4 group A member 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618830.1
SIO_010081: LOC109924537
subclass of: SO_0000673
so part of: LOC109924537
location: complement(join(1853285..1854192,1855901..1856079,1858795..1858997,1860109..1860272,1864335..1864386,1873694..1874508,1889596..1889842))
location: region:1853285-1889842:-1
so has part: feature:1889596-1889842:-1:exon
so has part: feature:1873694-1874508:-1:exon
so has part: feature:1864335-1864386:-1:exon
so has part: feature:1860109-1860272:-1:exon
so has part: feature:1858795-1858997:-1:exon
so has part: feature:1855901-1856079:-1:exon
so has part: feature:1853285-1854192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1889596-1889842:-1:exon

position:1889596:-1
position: 1889596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1873694-1874508:-1:exon

position:1873694:-1
position: 1873694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874508:-1
position: 1874508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1864335-1864386:-1:exon

position:1864335:-1
position: 1864335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1864386:-1
position: 1864386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1860109-1860272:-1:exon

position:1860109:-1
position: 1860109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1860272:-1
position: 1860272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1858795-1858997:-1:exon

position:1858795:-1
position: 1858795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858997:-1
position: 1858997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1855901-1856079:-1:exon

position:1855901:-1
position: 1855901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856079:-1
position: 1856079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1853285-1854192:-1:exon

position:1854192:-1
position: 1854192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109924537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 4 group A member 1-like
translation: MPCLQAQYGTLPQSGGPYEDYSSDFLTPEFVKLGMDLSTTEIAATTSLPSFNTFIDSNNGDFDAYLYQLMLTNQQSPFKVEDVQMFGCYPASINMHLEEVLPQCGSSQYYNGSCSIPSPSTPAFQTQQVSIWDDSFPHHSLQYGEVDHLLDQQKNVSQLSFFSFKQVPSESPVSHCHMRLDASSHGANPVHQLVDTMSYDATSQASMNFPALPMDRGPRLLDSPIVIDNPIPSPPVRNPPSNEGQCAVCGDNASCQHYGVRTCEGCKGFFKFALTMDTSKVIKVQCSTMVRTDSLKGRRGRLPSKPKSVQEATPSNVPVSLITALVRAHIDSNPIMSNLDYSKFQESSVYQPQEDEAGDIRQFYELLAGSMEMIRKWAEKIPGFSGLPKEDQDLLLESAFLELFILRLAYRSSPDEGKLIFCSGIVLHRQQCVRGFGEWIDSIIDFSGTLQRMKIDVSSFACLAALVVITDRHGLKEPKKVEDLQTKIITCLKDHVTSSAGEQMRPNYLSKLLGKLPELCTLCTQGLQRIFYLKLADLVPPPAIVDKLFLDTLPF
SIO_010081: LOC109924537
subclass of: SO_0000673
so part of: LOC109924537
location: complement(join(1853936..1854192,1855901..1856079,1858795..1858997,1860109..1860272,1864335..1864386,1873694..1874506))
location: region:1853936-1874506:-1
so has part: feature:1873694-1874506:-1:exon
so has part: feature:1864335-1864386:-1:exon
so has part: feature:1860109-1860272:-1:exon
so has part: feature:1858795-1858997:-1:exon
so has part: feature:1855901-1856079:-1:exon
so has part: feature:1853936-1854192:-1:exon

XP_048474787.1
type: Protein
SIO_000068: ncbiprotein

position:1853936:-1
position: 1853936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874506:-1
position: 1874506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1873694-1874506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1864335-1864386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1860109-1860272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1858795-1858997:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1855901-1856079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1853936-1854192:-1:exon

tamalin
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: tamalin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1962825..1978243)
location: region:1962825-1978243:-1
so has part: feature:1962825-1978243:-1:exon
subclass of: SO_0000010

109938789
type: Gene
SIO_000068: ncbigene

position:1962825:-1
position: 1962825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978243:-1
position: 1978243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1962825-1978243:-1:exon

tamalin
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tamalin
product: trafficking regulator and scaffold protein tamalin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618831.1
SIO_010081: tamalin
subclass of: SO_0000673
so part of: tamalin
location: complement(join(1962825..1963813,1967994..1968060,1969318..1969384,1972041..1972189,1972374..1972428,1973831..1973880,1977925..1978243))
location: region:1962825-1978243:-1
so has part: feature:1977925-1978243:-1:exon
so has part: feature:1973831-1973880:-1:exon
so has part: feature:1972374-1972428:-1:exon
so has part: feature:1972041-1972189:-1:exon
so has part: feature:1969318-1969384:-1:exon
so has part: feature:1967994-1968060:-1:exon
so has part: feature:1962825-1963813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1977925-1978243:-1:exon

position:1977925:-1
position: 1977925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1973831-1973880:-1:exon

position:1973831:-1
position: 1973831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973880:-1
position: 1973880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1972374-1972428:-1:exon

position:1972374:-1
position: 1972374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972428:-1
position: 1972428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1972041-1972189:-1:exon

position:1972041:-1
position: 1972041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972189:-1
position: 1972189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1969318-1969384:-1:exon

position:1969318:-1
position: 1969318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1969384:-1
position: 1969384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1967994-1968060:-1:exon

position:1967994:-1
position: 1967994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968060:-1
position: 1968060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1962825-1963813:-1:exon

position:1963813:-1
position: 1963813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tamalin
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tamalin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general receptor for phosphoinositides 1-associated scaffold protein
translation: MTFRRVKKLSRKEDYGSAECTGADSDIYKSGAETYKTSAETCKTSELYKTLAYSGGTLPRSHKQRSLMKWKTLTDSPEHERRIITLEKQDGEAFGFEIQTYGLHHRDEKSMEMCTFVCRVRENTPAELGGLRQGNEQALLHLWLSSLLMLETVYGTSIRRAELETRLQYLKQTLQEKWEEYRSLMVQEQRLVHGIVSKDPSVYDAFESVTASLCGQTHYLSPSAQRQPGSGGSTRSSAMEGDDEPIYQTCIFDPLDMGSDDSHGSEVVLAKKLLTRSVSAKAGHNGVSSSTWDKVNNQSAFGTLPRKSRRKSLRKRLLKYIPGLNRSVEEEESQL
SIO_010081: tamalin
subclass of: SO_0000673
so part of: tamalin
location: complement(join(1963386..1963813,1967994..1968060,1969318..1969384,1972041..1972189,1972374..1972428,1973831..1973880,1977925..1978116))
location: region:1963386-1978116:-1
so has part: feature:1977925-1978116:-1:exon
so has part: feature:1973831-1973880:-1:exon
so has part: feature:1972374-1972428:-1:exon
so has part: feature:1972041-1972189:-1:exon
so has part: feature:1969318-1969384:-1:exon
so has part: feature:1967994-1968060:-1:exon
so has part: feature:1963386-1963813:-1:exon

XP_048474788.1
type: Protein
SIO_000068: ncbiprotein

position:1963386:-1
position: 1963386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978116:-1
position: 1978116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977925-1978116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1973831-1973880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1972374-1972428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1972041-1972189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1969318-1969384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1967994-1968060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1963386-1963813:-1:exon

trnag-gcc
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnag-gcc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1990167..1990237
location: region:1990167-1990237:1
so has part: feature:1990167-1990237:1:exon
subclass of: SO_0000663

125487449
type: Gene
SIO_000068: ncbigene

position:1990167:1
position: 1990167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1990237:1
position: 1990237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1990167-1990237:1:exon

trnag-gcc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnag-gcc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1990199..1990201,aa:Gly,seq:gcc)
SIO_010081: trnag-gcc
subclass of: SO_0000673
so part of: trnag-gcc
location: 1990167..1990237
location: region:1990167-1990237:1
so has part: feature:1990167-1990237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1990167-1990237:1:exon

LOC109924196
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1994475..2006564
location: region:1994475-2006564:1
so has part: feature:1994475-2006564:1:exon
subclass of: SO_0000010

109924196
type: Gene
SIO_000068: ncbigene

position:1994475:1
position: 1994475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2006564:1
position: 2006564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994475-2006564:1:exon

LOC109924196
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924196
product: activin receptor type-1B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 117 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618832.1
SIO_010081: LOC109924196
subclass of: SO_0000673
so part of: LOC109924196
location: join(1994475..1994517,1995081..1995362,1996221..1996451,1997361..1997528,2000622..2000778,2002753..2002877,2004237..2004367,2006045..2006564)
location: region:1994475-2006564:1
so has part: feature:1994475-1994517:1:exon
so has part: feature:1995081-1995362:1:exon
so has part: feature:1996221-1996451:1:exon
so has part: feature:1997361-1997528:1:exon
so has part: feature:2000622-2000778:1:exon
so has part: feature:2002753-2002877:1:exon
so has part: feature:2004237-2004367:1:exon
so has part: feature:2006045-2006564:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1994475-1994517:1:exon

position:1994517:1
position: 1994517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1995081-1995362:1:exon

position:1995081:1
position: 1995081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1995362:1
position: 1995362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1996221-1996451:1:exon

position:1996221:1
position: 1996221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1996451:1
position: 1996451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1997361-1997528:1:exon

position:1997361:1
position: 1997361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1997528:1
position: 1997528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2000622-2000778:1:exon

position:2000622:1
position: 2000622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2000778:1
position: 2000778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2002753-2002877:1:exon

position:2002753:1
position: 2002753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2002877:1
position: 2002877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2004237-2004367:1:exon

position:2004237:1
position: 2004237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2004367:1
position: 2004367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2006045-2006564:1:exon

position:2006045:1
position: 2006045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924196
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activin receptor type-1B-like
translation: MAEASLEPPILRKDAFSRSLLPPTPGPTDDAFDGWGPVELAAVIAGPVFLLCVLLMVTVFLCHYHHQRVYHDRNQLDMEEPSCDHMYISEGKSLKDLMFDMTTSGSGSGLPLFVRRTIARTIVLQEIIGKGRFGEVWRGKWRGGDIAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGLIKLALSAVSGLAHLHMEIVGTQGKPGIAHRDLKSKNILVKKNGTCAIADLGLAVRHDSLTDTIDIAPNQRVGTKRYMAPEVLDETINMQHFDSFKCADIYALGLVYWEIARRCSAGGIHEDYQLPYFDLVPSDPSIEEMRKVVCEQNLRPNVPTVWHTNEALRVMTKIMRECWYANGAARLTALRIKKALSQLSIQEDVKI
SIO_010081: LOC109924196
subclass of: SO_0000673
so part of: LOC109924196
location: join(1994475..1994517,1995081..1995362,1996221..1996451,1997361..1997528,2000622..2000778,2002753..2002877,2004237..2004367,2006045..2006170)
location: region:1994475-2006170:1
so has part: feature:1994475-1994517:1:exon
so has part: feature:1995081-1995362:1:exon
so has part: feature:1996221-1996451:1:exon
so has part: feature:1997361-1997528:1:exon
so has part: feature:2000622-2000778:1:exon
so has part: feature:2002753-2002877:1:exon
so has part: feature:2004237-2004367:1:exon
so has part: feature:2006045-2006170:1:exon

XP_048474789.1
type: Protein
SIO_000068: ncbiprotein

position:2006170:1
position: 2006170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994475-1994517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1995081-1995362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1996221-1996451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997361-1997528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2000622-2000778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2002753-2002877:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2004237-2004367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2006045-2006170:1:exon

LOC125487442
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487442
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2080392..2092925
location: region:2080392-2092925:1
so has part: feature:2080392-2092925:1:exon
subclass of: SO_0000011

125487442
type: Gene
SIO_000068: ncbigene

position:2080392:1
position: 2080392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2092925:1
position: 2092925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2080392-2092925:1:exon

LOC125487442
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487442
product: uncharacterized LOC125487442
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007265900.1
SIO_010081: LOC125487442
subclass of: SO_0000673
so part of: LOC125487442
location: join(2080392..2080537,2090456..2090609,2092188..2092925)
location: region:2080392-2092925:1
so has part: feature:2080392-2080537:1:exon
so has part: feature:2090456-2090609:1:exon
so has part: feature:2092188-2092925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2080392-2080537:1:exon

position:2080537:1
position: 2080537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2090456-2090609:1:exon

position:2090456:1
position: 2090456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2090609:1
position: 2090609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2092188-2092925:1:exon

position:2092188:1
position: 2092188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926225
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2132234..2163687)
location: region:2132234-2163687:-1
so has part: feature:2132234-2163687:-1:exon
subclass of: SO_0000010

109926225
type: Gene
SIO_000068: ncbigene

position:2132234:-1
position: 2132234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2163687:-1
position: 2163687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2132234-2163687:-1:exon

LOC109926225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926225
product: natural resistance-associated macrophage protein 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048619006.1
SIO_010081: LOC109926225
subclass of: SO_0000673
so part of: LOC109926225
location: complement(join(2132234..2132344,2136087..2136206,2142321..2142443,2143875..2143999,2148243..2148308,2149881..2149963,2163427..2163533,2163618..2163687))
location: region:2132234-2163687:-1
so has part: feature:2163618-2163687:-1:exon
so has part: feature:2163427-2163533:-1:exon
so has part: feature:2149881-2149963:-1:exon
so has part: feature:2148243-2148308:-1:exon
so has part: feature:2143875-2143999:-1:exon
so has part: feature:2142321-2142443:-1:exon
so has part: feature:2136087-2136206:-1:exon
so has part: feature:2132234-2132344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2163618-2163687:-1:exon

position:2163618:-1
position: 2163618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2163427-2163533:-1:exon

position:2163427:-1
position: 2163427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2163533:-1
position: 2163533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2149881-2149963:-1:exon

position:2149881:-1
position: 2149881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2149963:-1
position: 2149963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2148243-2148308:-1:exon

position:2148243:-1
position: 2148243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2148308:-1
position: 2148308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2143875-2143999:-1:exon

position:2143875:-1
position: 2143875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2143999:-1
position: 2143999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2142321-2142443:-1:exon

position:2142321:-1
position: 2142321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2142443:-1
position: 2142443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2136087-2136206:-1:exon

position:2136087:-1
position: 2136087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2136206:-1
position: 2136206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2132234-2132344:-1:exon

position:2132344:-1
position: 2132344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926225
product: natural resistance-associated macrophage protein 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048619005.1
SIO_010081: LOC109926225
subclass of: SO_0000673
so part of: LOC109926225
location: complement(join(2132234..2132344,2136087..2136206,2142321..2142443,2143875..2143999,2148243..2148308,2149881..2150073))
location: region:2132234-2150073:-1
so has part: feature:2149881-2150073:-1:exon
so has part: feature:2148243-2148308:-1:exon
so has part: feature:2143875-2143999:-1:exon
so has part: feature:2142321-2142443:-1:exon
so has part: feature:2136087-2136206:-1:exon
so has part: feature:2132234-2132344:-1:exon

position:2150073:-1
position: 2150073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2149881-2150073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2148243-2148308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2143875-2143999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2142321-2142443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2136087-2136206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2132234-2132344:-1:exon

LOC109926225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natural resistance-associated macrophage protein 2-like
translation: MSLKQEKSEPTESSEPEQDCNTMNFNQETKESTDKPPKMIDTSCTQINLAESFATMELSFETHQVEKVSVPNSSSTRFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAIAGFKIIWVLLLATILGLMLQRLSARLGVVTGMQLAEVCRRQYPKFPRIVLWLMVELAIIGSDMQEVIGSAIAINLLSVGR
SIO_010081: LOC109926225
subclass of: SO_0000673
so part of: LOC109926225
location: complement(join(2132234..2132344,2136087..2136206,2142321..2142443,2143875..2143999,2148243..2148308,2149881..2149914))
location: region:2132234-2149914:-1
so has part: feature:2149881-2149914:-1:exon
so has part: feature:2148243-2148308:-1:exon
so has part: feature:2143875-2143999:-1:exon
so has part: feature:2142321-2142443:-1:exon
so has part: feature:2136087-2136206:-1:exon
so has part: feature:2132234-2132344:-1:exon

XP_048474962.1
type: Protein
SIO_000068: ncbiprotein

position:2149914:-1
position: 2149914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2149881-2149914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2148243-2148308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2143875-2143999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2142321-2142443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2136087-2136206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2132234-2132344:-1:exon

LOC109926225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natural resistance-associated macrophage protein 2-like
translation: MSLKQEKSEPTESSEPEQDCNTMNFNQETKESTDKPPKMIDTSCTQINLAESFATMELSFETHQVEKVSVPNSSSTRFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAIAGFKIIWVLLLATILGLMLQRLSARLGVVTGMQLAEVCRRQYPKFPRIVLWLMVELAIIGSDMQEVIGSAIAINLLSVGR
SIO_010081: LOC109926225
subclass of: SO_0000673
so part of: LOC109926225
location: complement(join(2132234..2132344,2136087..2136206,2142321..2142443,2143875..2143999,2148243..2148308,2149881..2149914))
location: region:2132234-2149914:-1
so has part: feature:2149881-2149914:-1:exon
so has part: feature:2148243-2148308:-1:exon
so has part: feature:2143875-2143999:-1:exon
so has part: feature:2142321-2142443:-1:exon
so has part: feature:2136087-2136206:-1:exon
so has part: feature:2132234-2132344:-1:exon

XP_048474963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2149881-2149914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2148243-2148308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2143875-2143999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2142321-2142443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2136087-2136206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2132234-2132344:-1:exon

LOC109925619
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2173500..2244952
location: region:2173500-2244952:1
so has part: feature:2173500-2244952:1:exon
subclass of: SO_0000010

109925619
type: Gene
SIO_000068: ncbigene

position:2173500:1
position: 2173500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2244952:1
position: 2244952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2173500-2244952:1:exon

LOC109925619
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925619
product: bridging integrator 2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619018.1
SIO_010081: LOC109925619
subclass of: SO_0000673
so part of: LOC109925619
location: join(2173500..2173660,2214799..2214853,2216666..2216760,2219238..2219333,2223277..2223384,2224556..2224641,2226236..2226311,2228729..2228811,2230954..2232130,2237170..2237343,2242745..2242840,2244595..2244952)
location: region:2173500-2244952:1
so has part: feature:2173500-2173660:1:exon
so has part: feature:2214799-2214853:1:exon
so has part: feature:2216666-2216760:1:exon
so has part: feature:2219238-2219333:1:exon
so has part: feature:2223277-2223384:1:exon
so has part: feature:2224556-2224641:1:exon
so has part: feature:2226236-2226311:1:exon
so has part: feature:2228729-2228811:1:exon
so has part: feature:2230954-2232130:1:exon
so has part: feature:2237170-2237343:1:exon
so has part: feature:2242745-2242840:1:exon
so has part: feature:2244595-2244952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2173500-2173660:1:exon

position:2173660:1
position: 2173660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2214799-2214853:1:exon

position:2214799:1
position: 2214799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214853:1
position: 2214853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2216666-2216760:1:exon

position:2216666:1
position: 2216666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2216760:1
position: 2216760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2219238-2219333:1:exon

position:2219238:1
position: 2219238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2219333:1
position: 2219333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2223277-2223384:1:exon

position:2223277:1
position: 2223277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2223384:1
position: 2223384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2224556-2224641:1:exon

position:2224556:1
position: 2224556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224641:1
position: 2224641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2226236-2226311:1:exon

position:2226236:1
position: 2226236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2226311:1
position: 2226311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2228729-2228811:1:exon

position:2228729:1
position: 2228729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2228811:1
position: 2228811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2230954-2232130:1:exon

position:2230954:1
position: 2230954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2232130:1
position: 2232130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2237170-2237343:1:exon

position:2237170:1
position: 2237170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2237343:1
position: 2237343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2242745-2242840:1:exon

position:2242745:1
position: 2242745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2242840:1
position: 2242840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2244595-2244952:1:exon

position:2244595:1
position: 2244595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925619
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bridging integrator 2-like
translation: MAETPSKPGGAGLFAKHVQKRFMRAQEMADGNKLHKDLKAYLNAVKAMHDTSKRLCLTLREIYESDWDGKDELLPIVENNDLLWADYEEKLSDQAMRTLETYLSQFPAFKKRIAKRGRKLVDYDSCRHHLESLQSAKKKDETKITKAEEEFVNAQNEFEELNAQLREELPELWSSRIGCYVTIFQNMSNLRDIFYQEMSKLNQGLYSVMTKLEKQHSTKVFIVKGVATNRRSLIISSPVNPASQLSTSSEISLDQSPAAAALPKEEAVPPSAPSSTEADLAQPTALSQAAPETTEPRKEILPAAASSPIETPKPLPRLSLSQVESLDLPSSEALSPLASLQDTSVSADLELAEKPGDSRSESPAKVVDTPPLEAPRSDSSPPEPTLDARSSDESITDGKHPEVSAVNTSPSLETLSTVNVDAGEEPSTATEELNLSSIQNPSTDLATNPCPAPSTGEVPPMPSDALEVSPPVSSDALASSESQAPREEIVEASPVVLEDSEAQPSPLTDDRASSEGIPQASPITSEVGPESQALSEALSSPEESTVNEATSSSSPPAPEMPQTCIGEKMPPKAQSEGPVLSVSLPENDTLSSSEDGSQDTPEPCELAVTSDPTSPEPVPQDMAVPVADKGKVEDIRDKADERKEASLSSSGSEGLTLDESNAVEQSACEELPPGFMYKVKATHNSCEEAHLQFTQGDIILVLSVDGTQIETKGCLMGVREADWSLKKDLATLQGPFPEHLAERVD
SIO_010081: LOC109925619
subclass of: SO_0000673
so part of: LOC109925619
location: join(2173577..2173660,2214799..2214853,2216666..2216760,2219238..2219333,2223277..2223384,2224556..2224641,2226236..2226311,2228729..2228811,2230954..2232130,2237170..2237343,2242745..2242840,2244595..2244702)
location: region:2173577-2244702:1
so has part: feature:2173577-2173660:1:exon
so has part: feature:2214799-2214853:1:exon
so has part: feature:2216666-2216760:1:exon
so has part: feature:2219238-2219333:1:exon
so has part: feature:2223277-2223384:1:exon
so has part: feature:2224556-2224641:1:exon
so has part: feature:2226236-2226311:1:exon
so has part: feature:2228729-2228811:1:exon
so has part: feature:2230954-2232130:1:exon
so has part: feature:2237170-2237343:1:exon
so has part: feature:2242745-2242840:1:exon
so has part: feature:2244595-2244702:1:exon

XP_048474975.1
type: Protein
SIO_000068: ncbiprotein

position:2173577:1
position: 2173577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2244702:1
position: 2244702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2173577-2173660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2214799-2214853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2216666-2216760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2219238-2219333:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2223277-2223384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2224556-2224641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2226236-2226311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2228729-2228811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2230954-2232130:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2237170-2237343:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2242745-2242840:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2244595-2244702:1:exon

LOC109925714
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2266208..2284019
location: region:2266208-2284019:1
so has part: feature:2266208-2284019:1:exon
subclass of: SO_0000010

109925714
type: Gene
SIO_000068: ncbigene

position:2266208:1
position: 2266208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2284019:1
position: 2284019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2266208-2284019:1:exon

LOC109925714
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925714
product: natural resistance-associated macrophage protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618833.1
SIO_010081: LOC109925714
subclass of: SO_0000673
so part of: LOC109925714
location: join(2266208..2266271,2268464..2268531,2270561..2270716,2271932..2272090,2276460..2276546,2283026..2283145,2283930..2284019)
location: region:2266208-2284019:1
so has part: feature:2266208-2266271:1:exon
so has part: feature:2268464-2268531:1:exon
so has part: feature:2270561-2270716:1:exon
so has part: feature:2271932-2272090:1:exon
so has part: feature:2276460-2276546:1:exon
so has part: feature:2283026-2283145:1:exon
so has part: feature:2283930-2284019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2266208-2266271:1:exon

position:2266271:1
position: 2266271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2268464-2268531:1:exon

position:2268464:1
position: 2268464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268531:1
position: 2268531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2270561-2270716:1:exon

position:2270561:1
position: 2270561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2270716:1
position: 2270716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2271932-2272090:1:exon

position:2271932:1
position: 2271932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2272090:1
position: 2272090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2276460-2276546:1:exon

position:2276460:1
position: 2276460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2276546:1
position: 2276546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2283026-2283145:1:exon

position:2283026:1
position: 2283026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2283145:1
position: 2283145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2283930-2284019:1:exon

position:2283930:1
position: 2283930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925714
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natural resistance-associated macrophage protein 2-like
translation: MCAALTIPKKLDTIQDHKTLRSLRKLEALFAFFIAVMAVTFGYEYVTVKPDQVQLLKGMFVPTCEGCGTRELQQAVGTVGAVIMPHNIYLYSALVRSRQVNRANKNEVKEANRYYLIEACMALLLSFIINVFVVSVFAEAFYNKTNAQVHEVCANSTSPHSGLFPSDNNTLSVDIYKGGVVLGCYFGPAALYIWAIGILAAGQSSTMSGTYTGQFVMENFIPLNQVVPSAFSVLRRTTPANRASLYR
SIO_010081: LOC109925714
subclass of: SO_0000673
so part of: LOC109925714
location: join(2266208..2266271,2268464..2268531,2270561..2270716,2271932..2272090,2276460..2276546,2283026..2283145,2283930..2284019)
location: region:2266208-2284019:1
so has part: feature:2266208-2266271:1:exon
so has part: feature:2268464-2268531:1:exon
so has part: feature:2270561-2270716:1:exon
so has part: feature:2271932-2272090:1:exon
so has part: feature:2276460-2276546:1:exon
so has part: feature:2283026-2283145:1:exon
so has part: feature:2283930-2284019:1:exon

XP_048474790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2266208-2266271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2268464-2268531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2270561-2270716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2271932-2272090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2276460-2276546:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2283026-2283145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2283930-2284019:1:exon

LOC125487411
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2340773..2348671
location: region:2340773-2348671:1
so has part: feature:2340773-2348671:1:exon
subclass of: SO_0000010

125487411
type: Gene
SIO_000068: ncbigene

position:2340773:1
position: 2340773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2348671:1
position: 2348671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2340773-2348671:1:exon

LOC125487411
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487411
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_048618834.1
SIO_010081: LOC125487411
subclass of: SO_0000673
so part of: LOC125487411
location: join(2340773..2340839,2347758..2348671)
location: region:2340773-2348671:1
so has part: feature:2340773-2340839:1:exon
so has part: feature:2347758-2348671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2340773-2340839:1:exon

position:2340839:1
position: 2340839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2347758-2348671:1:exon

position:2347758:1
position: 2347758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487411
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MYRPIEHVQKLYYMVLAVIGVPVNLLGIIILSRGKCGLSACTTQYLVAMATADLLVIITSVILWRISYYYFPGSFLDITPLCSINSALVSAATDCSVWFTVTFSSDRFVAICCQKLKSKYCTGRNAAVVLVATSALLCFKNVPWYFTYESMVIIDNVPWFCAAKASYYNDPGWVGFDWFVTVLTPLLPFALILLLNALTVRHILIASRIRKRLRGQSKEERSSDPEMESRRKSIILLFTISGSFILLWSVHVIEFLYYTILGIDPQRDYNDSEHIFKQVGWMMRDLSCCTNTFIYGVTQSKFREQVKSVLKYPVMSTFHLINKENK
SIO_010081: LOC125487411
subclass of: SO_0000673
so part of: LOC125487411
location: join(2340773..2340839,2347758..2348671)
location: region:2340773-2348671:1
so has part: feature:2340773-2340839:1:exon
so has part: feature:2347758-2348671:1:exon

XP_048474791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2340773-2340839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2347758-2348671:1:exon

LOC125487390
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2382381..2389974
location: region:2382381-2389974:1
so has part: feature:2382381-2389974:1:exon
subclass of: SO_0000011

125487390
type: Gene
SIO_000068: ncbigene

position:2382381:1
position: 2382381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389974:1
position: 2389974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382381-2389974:1:exon

LOC125487390
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487390
product: uncharacterized LOC125487390, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007265867.1
SIO_010081: LOC125487390
subclass of: SO_0000673
so part of: LOC125487390
location: join(2382381..2383761,2384074..2384192,2389746..2389974)
location: region:2382381-2389974:1
so has part: feature:2382381-2383761:1:exon
so has part: feature:2384074-2384192:1:exon
so has part: feature:2389746-2389974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2382381-2383761:1:exon

position:2383761:1
position: 2383761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2384074-2384192:1:exon

position:2384074:1
position: 2384074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2384192:1
position: 2384192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2389746-2389974:1:exon

position:2389746:1
position: 2389746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487390
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487390
product: uncharacterized LOC125487390, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007265866.1
SIO_010081: LOC125487390
subclass of: SO_0000673
so part of: LOC125487390
location: join(2382381..2383761,2384074..2384192,2384978..2386533)
location: region:2382381-2386533:1
so has part: feature:2382381-2383761:1:exon
so has part: feature:2384074-2384192:1:exon
so has part: feature:2384978-2386533:1:exon

position:2386533:1
position: 2386533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382381-2383761:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2384074-2384192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2384978-2386533:1:exon

position:2384978:1
position: 2384978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926362
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2441172..2494909
location: region:2441172-2494909:1
so has part: feature:2441172-2494909:1:exon
subclass of: SO_0000010

109926362
type: Gene
SIO_000068: ncbigene

position:2441172:1
position: 2441172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2494909:1
position: 2494909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2441172-2494909:1:exon

LOC109926362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926362
product: cytoplasmic dynein 1 intermediate chain 2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618809.1
SIO_010081: LOC109926362
subclass of: SO_0000673
so part of: LOC109926362
location: join(2441172..2441295,2445017..2445134,2453377..2453467,2458855..2458970,2463249..2463344,2470538..2470700,2470841..2470940,2473357..2473482,2475110..2475256,2475433..2475546,2476340..2476473,2484481..2484625,2485116..2485256,2485913..2486038,2486931..2494909)
location: region:2441172-2494909:1
so has part: feature:2441172-2441295:1:exon
so has part: feature:2445017-2445134:1:exon
so has part: feature:2453377-2453467:1:exon
so has part: feature:2458855-2458970:1:exon
so has part: feature:2463249-2463344:1:exon
so has part: feature:2470538-2470700:1:exon
so has part: feature:2470841-2470940:1:exon
so has part: feature:2473357-2473482:1:exon
so has part: feature:2475110-2475256:1:exon
so has part: feature:2475433-2475546:1:exon
so has part: feature:2476340-2476473:1:exon
so has part: feature:2484481-2484625:1:exon
so has part: feature:2485116-2485256:1:exon
so has part: feature:2485913-2486038:1:exon
so has part: feature:2486931-2494909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2441172-2441295:1:exon

position:2441295:1
position: 2441295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2445017-2445134:1:exon

position:2445017:1
position: 2445017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2445134:1
position: 2445134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2453377-2453467:1:exon

position:2453377:1
position: 2453377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2453467:1
position: 2453467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2458855-2458970:1:exon

position:2458855:1
position: 2458855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458970:1
position: 2458970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2463249-2463344:1:exon

position:2463249:1
position: 2463249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463344:1
position: 2463344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2470538-2470700:1:exon

position:2470538:1
position: 2470538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470700:1
position: 2470700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2470841-2470940:1:exon

position:2470841:1
position: 2470841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470940:1
position: 2470940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2473357-2473482:1:exon

position:2473357:1
position: 2473357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2473482:1
position: 2473482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2475110-2475256:1:exon

position:2475110:1
position: 2475110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2475256:1
position: 2475256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2475433-2475546:1:exon

position:2475433:1
position: 2475433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2475546:1
position: 2475546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2476340-2476473:1:exon

position:2476340:1
position: 2476340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2476473:1
position: 2476473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2484481-2484625:1:exon

position:2484481:1
position: 2484481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2484625:1
position: 2484625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2485116-2485256:1:exon

position:2485116:1
position: 2485116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2485256:1
position: 2485256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2485913-2486038:1:exon

position:2485913:1
position: 2485913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486038:1
position: 2486038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2486931-2494909:1:exon

position:2486931:1
position: 2486931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 intermediate chain 2-like
translation: MADKSELKAELERKKLRLAQIREEKKRKEEEKKRKDGDFKKETSSASQDELDLERKRKETEALLQSIGITTEPSMVHSPISPSNKSLGTPSESESQESVEGTAGARHHLQKLGIARMTHVDIAPCERLAHCKETQTPVVAKPDEEKEAAPAPTKASTVSEPEAPEEPQEETGEEHKATRHDLTEEEKENILRSDGFLSFFNQTSRMIEQALTEHTDIFFDYSGRNLDDKEGEIQAGAKLSLNRQFYDENWSKDRVVTCLDWSQQYPELLVASYTSNEDALNEPDGVAVVWNMKFKKTTPEYIFHCQSKVMSACFAQFHPNLMVGGTYSGQIVLWDNRSNKKMPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLVSVSTDGKLCTWSLDMLSQPQDSIELVHKQSKAVAVTSMSFPLGDINNFVVGSEEGSVYTACRLGSKAGIIEMFEGHQGPVTGVHCHTAAGAVDFSHLFITSSFDWTVKLWSTKSNKSLYSFEDSSDYVFDVMWSPIHPALFACVDGMGRLDLWNLNEDSEVPTASVTMEGNPALHRVRWAQSGREIAVGDSEGQVLIYDVGEQIAVPRNDEWTSFAQTLVDLKANGNDAEEEATAGLLA
SIO_010081: LOC109926362
subclass of: SO_0000673
so part of: LOC109926362
location: join(2441188..2441295,2445017..2445134,2453377..2453467,2458855..2458970,2463249..2463344,2470538..2470700,2470841..2470940,2473357..2473482,2475110..2475256,2475433..2475546,2476340..2476473,2484481..2484625,2485116..2485256,2485913..2486038,2486931..2487044)
location: region:2441188-2487044:1
so has part: feature:2441188-2441295:1:exon
so has part: feature:2445017-2445134:1:exon
so has part: feature:2453377-2453467:1:exon
so has part: feature:2458855-2458970:1:exon
so has part: feature:2463249-2463344:1:exon
so has part: feature:2470538-2470700:1:exon
so has part: feature:2470841-2470940:1:exon
so has part: feature:2473357-2473482:1:exon
so has part: feature:2475110-2475256:1:exon
so has part: feature:2475433-2475546:1:exon
so has part: feature:2476340-2476473:1:exon
so has part: feature:2484481-2484625:1:exon
so has part: feature:2485116-2485256:1:exon
so has part: feature:2485913-2486038:1:exon
so has part: feature:2486931-2487044:1:exon

XP_048474766.1
type: Protein
SIO_000068: ncbiprotein

position:2441188:1
position: 2441188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487044:1
position: 2487044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2441188-2441295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2445017-2445134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2453377-2453467:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2458855-2458970:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2463249-2463344:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2470538-2470700:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2470841-2470940:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2473357-2473482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2475110-2475256:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2475433-2475546:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2476340-2476473:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2484481-2484625:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2485116-2485256:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2485913-2486038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2486931-2487044:1:exon

LOC125487402
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2505473..2507339)
location: region:2505473-2507339:-1
so has part: feature:2505473-2507339:-1:exon
subclass of: SO_0000011

125487402
type: Gene
SIO_000068: ncbigene

position:2505473:-1
position: 2505473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2507339:-1
position: 2507339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2505473-2507339:-1:exon

LOC125487402
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487402
product: uncharacterized LOC125487402
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007265876.1
SIO_010081: LOC125487402
subclass of: SO_0000673
so part of: LOC125487402
location: complement(join(2505473..2506263,2506393..2507339))
location: region:2505473-2507339:-1
so has part: feature:2506393-2507339:-1:exon
so has part: feature:2505473-2506263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2506393-2507339:-1:exon

position:2506393:-1
position: 2506393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2505473-2506263:-1:exon

position:2506263:-1
position: 2506263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dazap2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: dazap2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2510602..2518380
location: region:2510602-2518380:1
so has part: feature:2510602-2518380:1:exon
subclass of: SO_0000010

125487401
type: Gene
SIO_000068: ncbigene

position:2510602:1
position: 2510602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518380:1
position: 2518380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510602-2518380:1:exon

dazap2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dazap2
product: DAZ associated protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_048618810.1
SIO_010081: dazap2
subclass of: SO_0000673
so part of: dazap2
location: join(2510602..2510745,2518037..2518380)
location: region:2510602-2518380:1
so has part: feature:2510602-2510745:1:exon
so has part: feature:2518037-2518380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2510602-2510745:1:exon

position:2510745:1
position: 2510745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2518037-2518380:1:exon

position:2518037:1
position: 2518037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dazap2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dazap2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAZ-associated protein 2
translation: MAPPKQWPTAQAPQAPPYTEAPSSYAELHQQPRFVQAPPGYPGGFYVPPTSQMQMGPTGAAMPIQYYAVPQVFSPSSTVFVKDGYDAGARFGAGATANIPVSVLNS
SIO_010081: dazap2
subclass of: SO_0000673
so part of: dazap2
location: join(2510665..2510745,2518037..2518276)
location: region:2510665-2518276:1
so has part: feature:2510665-2510745:1:exon
so has part: feature:2518037-2518276:1:exon

XP_048474767.1
type: Protein
SIO_000068: ncbiprotein

position:2510665:1
position: 2510665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518276:1
position: 2518276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510665-2510745:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2518037-2518276:1:exon

LOC109922684
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109922684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2549956..2579276
location: region:2549956-2579276:1
so has part: feature:2549956-2579276:1:exon
subclass of: SO_0000011

109922684
type: Gene
SIO_000068: ncbigene

position:2549956:1
position: 2549956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2579276:1
position: 2579276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549956-2579276:1:exon

LOC109922684
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109922684
product: uncharacterized LOC109922684
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007265875.1
SIO_010081: LOC109922684
subclass of: SO_0000673
so part of: LOC109922684
location: join(2549956..2550453,2552928..2553090,2579238..2579276)
location: region:2549956-2579276:1
so has part: feature:2549956-2550453:1:exon
so has part: feature:2552928-2553090:1:exon
so has part: feature:2579238-2579276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549956-2550453:1:exon

position:2550453:1
position: 2550453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2552928-2553090:1:exon

position:2552928:1
position: 2552928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2553090:1
position: 2553090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2579238-2579276:1:exon

position:2579238:1
position: 2579238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925716
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2594716..2661302
location: region:2594716-2661302:1
so has part: feature:2594716-2661302:1:exon
subclass of: SO_0000010

109925716
type: Gene
SIO_000068: ncbigene

position:2594716:1
position: 2594716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2661302:1
position: 2661302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594716-2661302:1:exon

LOC109925716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925716
product: POU domain, class 6, transcription factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618835.1
SIO_010081: LOC109925716
subclass of: SO_0000673
so part of: LOC109925716
location: join(2594716..2594761,2603331..2603446,2619211..2619430,2644601..2644773,2650942..2651055,2656404..2656622,2661168..2661302)
location: region:2594716-2661302:1
so has part: feature:2594716-2594761:1:exon
so has part: feature:2603331-2603446:1:exon
so has part: feature:2619211-2619430:1:exon
so has part: feature:2644601-2644773:1:exon
so has part: feature:2650942-2651055:1:exon
so has part: feature:2656404-2656622:1:exon
so has part: feature:2661168-2661302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2594716-2594761:1:exon

position:2594761:1
position: 2594761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2603331-2603446:1:exon

position:2603331:1
position: 2603331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2603446:1
position: 2603446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2619211-2619430:1:exon

position:2619211:1
position: 2619211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2619430:1
position: 2619430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2644601-2644773:1:exon

position:2644601:1
position: 2644601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2644773:1
position: 2644773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2650942-2651055:1:exon

position:2650942:1
position: 2650942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2651055:1
position: 2651055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2656404-2656622:1:exon

position:2656404:1
position: 2656404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2656622:1
position: 2656622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2661168-2661302:1:exon

position:2661168:1
position: 2661168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 6, transcription factor 1-like
translation: MNGQGCAITKWPVPEEQAATTPPSGLTPVTEGQAEQLHLQQQHTMPVSAPTVSQILPSENLATVVMASTGSVPLNQPLLIPLNMAGQVTAQQGLVLTFPTASIGSLPSLTSATGAGGIVKLPLANLQAASMLNTALQPTQLQQALQPQATLQSLPTSTVPLKQLEPQTQVTSVHPAQGLTLNPTILSSQPSLVGSLTATPVIANAVPSFQGITSQIITNAQGQVIGTVPLVMNPTTITTTNPVTAVAAQSLQVQAVTPQMLLNSQGQVIATVISNQFVPVLSRQGVPLSPVKTAQQKLKNMAATSHLTKQLQVLSGVQRDTSRHVETPEIPGVQKQAIEV
SIO_010081: LOC109925716
subclass of: SO_0000673
so part of: LOC109925716
location: join(2594716..2594761,2603331..2603446,2619211..2619430,2644601..2644773,2650942..2651055,2656404..2656622,2661168..2661302)
location: region:2594716-2661302:1
so has part: feature:2594716-2594761:1:exon
so has part: feature:2603331-2603446:1:exon
so has part: feature:2619211-2619430:1:exon
so has part: feature:2644601-2644773:1:exon
so has part: feature:2650942-2651055:1:exon
so has part: feature:2656404-2656622:1:exon
so has part: feature:2661168-2661302:1:exon

XP_048474792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2594716-2594761:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2603331-2603446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2619211-2619430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2644601-2644773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2650942-2651055:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2656404-2656622:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2661168-2661302:1:exon

LOC109926267
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2679659..2731544)
location: region:2679659-2731544:-1
so has part: feature:2679659-2731544:-1:exon
subclass of: SO_0000010

109926267
type: Gene
SIO_000068: ncbigene

position:2679659:-1
position: 2679659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2731544:-1
position: 2731544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2679659-2731544:-1:exon

LOC109926267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926267
product: POU domain, class 6, transcription factor 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618836.1
SIO_010081: LOC109926267
subclass of: SO_0000673
so part of: LOC109926267
location: complement(join(2679659..2681801,2688929..2689353,2705070..2705238,2731520..2731544))
location: region:2679659-2731544:-1
so has part: feature:2731520-2731544:-1:exon
so has part: feature:2705070-2705238:-1:exon
so has part: feature:2688929-2689353:-1:exon
so has part: feature:2679659-2681801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2731520-2731544:-1:exon

position:2731520:-1
position: 2731520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2705070-2705238:-1:exon

position:2705070:-1
position: 2705070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705238:-1
position: 2705238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2688929-2689353:-1:exon

position:2688929:-1
position: 2688929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2689353:-1
position: 2689353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2679659-2681801:-1:exon

position:2681801:-1
position: 2681801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 6, transcription factor 2-like
translation: MSFALSDKEPQNAPTEVDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALSAAEGPAYSQSAICRFEKLDITPKSAQKIKPVLERWLTEAEIRHRAGIQNLTEFVGSEPSKKRKRRTSFTPQALEILNAHFEKNTHPTGQEMTEIAEQLNYDREVVRVWFCNKRQTLKNTIKRLQQNDTAGTGSVERLSDSTVNIAGTG
SIO_010081: LOC109926267
subclass of: SO_0000673
so part of: LOC109926267
location: complement(join(2688948..2689353,2705070..2705238,2731520..2731544))
location: region:2688948-2731544:-1
so has part: feature:2731520-2731544:-1:exon
so has part: feature:2705070-2705238:-1:exon
so has part: feature:2688948-2689353:-1:exon

XP_048474793.1
type: Protein
SIO_000068: ncbiprotein

position:2688948:-1
position: 2688948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2731520-2731544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2705070-2705238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2688948-2689353:-1:exon

tfcp2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: tfcp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2734954..2826190
location: region:2734954-2826190:1
so has part: feature:2734954-2826190:1:exon
subclass of: SO_0000010

109925169
type: Gene
SIO_000068: ncbigene

position:2734954:1
position: 2734954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2826190:1
position: 2826190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2734954-2826190:1:exon

tfcp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tfcp2
product: transcription factor CP2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618981.1
SIO_010081: tfcp2
subclass of: SO_0000673
so part of: tfcp2
location: join(2734954..2735371,2740927..2741078,2741345..2741421,2750587..2750692,2757704..2757810,2775291..2775443,2783486..2783596,2784093..2784181,2784272..2784320,2797409..2797474,2797997..2798090,2802014..2802104,2806191..2806300,2820071..2820213,2822943..2822994,2824266..2826190)
location: region:2734954-2826190:1
so has part: feature:2734954-2735371:1:exon
so has part: feature:2740927-2741078:1:exon
so has part: feature:2741345-2741421:1:exon
so has part: feature:2750587-2750692:1:exon
so has part: feature:2757704-2757810:1:exon
so has part: feature:2775291-2775443:1:exon
so has part: feature:2783486-2783596:1:exon
so has part: feature:2784093-2784181:1:exon
so has part: feature:2784272-2784320:1:exon
so has part: feature:2797409-2797474:1:exon
so has part: feature:2797997-2798090:1:exon
so has part: feature:2802014-2802104:1:exon
so has part: feature:2806191-2806300:1:exon
so has part: feature:2820071-2820213:1:exon
so has part: feature:2822943-2822994:1:exon
so has part: feature:2824266-2826190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2734954-2735371:1:exon

position:2735371:1
position: 2735371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2740927-2741078:1:exon

position:2740927:1
position: 2740927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741078:1
position: 2741078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2741345-2741421:1:exon

position:2741345:1
position: 2741345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741421:1
position: 2741421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2750587-2750692:1:exon

position:2750587:1
position: 2750587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2750692:1
position: 2750692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2757704-2757810:1:exon

position:2757704:1
position: 2757704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757810:1
position: 2757810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2775291-2775443:1:exon

position:2775291:1
position: 2775291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2775443:1
position: 2775443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2783486-2783596:1:exon

position:2783486:1
position: 2783486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2783596:1
position: 2783596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2784093-2784181:1:exon

position:2784093:1
position: 2784093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2784181:1
position: 2784181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2784272-2784320:1:exon

position:2784272:1
position: 2784272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2784320:1
position: 2784320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2797409-2797474:1:exon

position:2797409:1
position: 2797409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2797474:1
position: 2797474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2797997-2798090:1:exon

position:2797997:1
position: 2797997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2798090:1
position: 2798090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2802014-2802104:1:exon

position:2802014:1
position: 2802014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2802104:1
position: 2802104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2806191-2806300:1:exon

position:2806191:1
position: 2806191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2806300:1
position: 2806300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2820071-2820213:1:exon

position:2820071:1
position: 2820071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2820213:1
position: 2820213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2822943-2822994:1:exon

position:2822943:1
position: 2822943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822994:1
position: 2822994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2824266-2826190:1:exon

position:2824266:1
position: 2824266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tfcp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tfcp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor CP2
translation: MAWALKMPMPDEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESNLPPENENKLLPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKIGELPEINGKYVKSIIRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDLDIPLSVGIVDPRANPTQLNTVEFLWDPSKRTSVFIQVHCISTEFTTRKHGGEKGVPFRIQIDTFKENENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPQEKEKYQPSYDTTILTEXXXWPDISYVNNTASPGFTSSQGSYTIAEGNGSPHHQPDPVPASTDTLGSFRKWACRELSVSPVSENQNLLPTATPQDAQQWLHRNRFSPYCRLFANFSGGDLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQELQQIREQQQHKHENGDSVSCSFYVYHAIYFEELTAVEMTEKIAQLFNISPRQIHQIYKQGPTGIHVLVSDEMIQNFQDESCFILDTLKAEGSDSYHIILK
SIO_010081: tfcp2
subclass of: SO_0000673
so part of: tfcp2
location: join(2735250..2735371,2740927..2741078,2741345..2741421,2750587..2750692,2757704..2757810,2775291..2775443,2783486..2783596,2784093..2784181,2784272..2784320,2797409..2797474,2797997..2798090,2802014..2802104,2806191..2806300,2820071..2820213,2822943..2822994,2824266..2824303)
location: region:2735250-2824303:1
so has part: feature:2735250-2735371:1:exon
so has part: feature:2740927-2741078:1:exon
so has part: feature:2741345-2741421:1:exon
so has part: feature:2750587-2750692:1:exon
so has part: feature:2757704-2757810:1:exon
so has part: feature:2775291-2775443:1:exon
so has part: feature:2783486-2783596:1:exon
so has part: feature:2784093-2784181:1:exon
so has part: feature:2784272-2784320:1:exon
so has part: feature:2797409-2797474:1:exon
so has part: feature:2797997-2798090:1:exon
so has part: feature:2802014-2802104:1:exon
so has part: feature:2806191-2806300:1:exon
so has part: feature:2820071-2820213:1:exon
so has part: feature:2822943-2822994:1:exon
so has part: feature:2824266-2824303:1:exon

XP_048474938.1
type: Protein
SIO_000068: ncbiprotein

position:2735250:1
position: 2735250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2824303:1
position: 2824303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735250-2735371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2740927-2741078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2741345-2741421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2750587-2750692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2757704-2757810:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2775291-2775443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2783486-2783596:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2784093-2784181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2784272-2784320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2797409-2797474:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2797997-2798090:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2802014-2802104:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2806191-2806300:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2820071-2820213:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2822943-2822994:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2824266-2824303:1:exon

gli1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: gli1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2855950..2888492)
location: region:2855950-2888492:-1
so has part: feature:2855950-2888492:-1:exon
subclass of: SO_0000010

109925471
type: Gene
SIO_000068: ncbigene

position:2855950:-1
position: 2855950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2888492:-1
position: 2888492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2855950-2888492:-1:exon

gli1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gli1
product: GLI family zinc finger 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618967.1
SIO_010081: gli1
subclass of: SO_0000673
so part of: gli1
location: complement(join(2855950..2858930,2859637..2859940,2861828..2861930,2862073..2862233,2870280..2870444,2870568..2870717,2873761..2873886,2877549..2877650,2878600..2878786,2879443..2879650,2888408..2888492))
location: region:2855950-2888492:-1
so has part: feature:2888408-2888492:-1:exon
so has part: feature:2879443-2879650:-1:exon
so has part: feature:2878600-2878786:-1:exon
so has part: feature:2877549-2877650:-1:exon
so has part: feature:2873761-2873886:-1:exon
so has part: feature:2870568-2870717:-1:exon
so has part: feature:2870280-2870444:-1:exon
so has part: feature:2862073-2862233:-1:exon
so has part: feature:2861828-2861930:-1:exon
so has part: feature:2859637-2859940:-1:exon
so has part: feature:2855950-2858930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2888408-2888492:-1:exon

position:2888408:-1
position: 2888408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2879443-2879650:-1:exon

position:2879443:-1
position: 2879443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2879650:-1
position: 2879650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2878600-2878786:-1:exon

position:2878600:-1
position: 2878600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2878786:-1
position: 2878786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2877549-2877650:-1:exon

position:2877549:-1
position: 2877549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2877650:-1
position: 2877650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2873761-2873886:-1:exon

position:2873761:-1
position: 2873761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873886:-1
position: 2873886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2870568-2870717:-1:exon

position:2870568:-1
position: 2870568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2870717:-1
position: 2870717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2870280-2870444:-1:exon

position:2870280:-1
position: 2870280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2870444:-1
position: 2870444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2862073-2862233:-1:exon

position:2862073:-1
position: 2862073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2862233:-1
position: 2862233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2861828-2861930:-1:exon

position:2861828:-1
position: 2861828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2861930:-1
position: 2861930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2859637-2859940:-1:exon

position:2859637:-1
position: 2859637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2859940:-1
position: 2859940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2855950-2858930:-1:exon

position:2858930:-1
position: 2858930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gli1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gli1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein GLI1
translation: MQQLQNQHPAPGQCHSNTVPRGLASAEGFSSRFSSPRNMLKVNRKWSSSISPLSDNNIDLHTMIRTSPNSLVAFINNSHCGSTTSGSYGHLSVTGISPTCGFPHPPTPSSKHQQFPIQPRGLATTFGNSQPSVSCSSQQPIGVTLLTRSQPHQPSKPFQAESSVSSSLDPINARYLEERSEGDVSSPASTGTQDHLLGRDDGDKDDGKQEPAVYETNCHWEGCSKEFDAQDQLVHHINNEHIHGERKEFVCHWQECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFESCNKAYSRLENLKTHLRSHTGEKPYICEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPYCTKRYTDPSSLRKHVKTVHGPEAHITKKQRGDINVRPSATQDGARSLPGQDGDAAHDEGSNAASKDFLQHTLMVPDTTMTFEASPGDHSPSSSESSLPGSANNNDSGVEMNTNGGGSSEDLTNVEDVASGDSAARVPDARLRRNGTALQRLADLKIGKLRQSRKTAAPSRGLKLPLIQGSGSHGQSAVCELSALPCHRIMELAVRDAASRSPLLERRGSTSSTISSAYTVSRRSSAVTPYLPSRRSSDSSLLGGRANDGTSSECYPPTSPGALRRYGEMASSATCPALPNLSPAQLYHLKAKYAAATGGPPPTPLVAAEQVGMDARPSHARDHANPALFPPDGLECPNSGGGGSHGYRAGVLRPPEIPGICEPVAETQSVPKVPRLHNLHHMHLAAVARQCCQLQHSAGSTSNLRGHIHSPRPPSITENAVMETLAMDTSHPASLGLPDDMAIYSNYQEANMAPLNHVCPNQAPGSHSHMDFHNRNLSANSNRNLGAAQSSFNQGPMASNMSLQHDNDSQCPMNQYVTQFLNRECLQANNMPIQWNEVSSGSMDIVPIEIPNTRSVQQDLAHPNPCLRQVNLNPQSSHPPMTFNHNHLDMTQNPQDVLTSHQKMPTGCQQSVKPTLSFQQSVPMLNPYQNPKQPLAAQPDYNQSRHALPSPHGMSQEHTANSRHPDSAPALGVRHLGSPLDEDRWTGAHTPMMQVKEMMVRNYVQSQQALIWGQPAKGASAETLMPINMDRPEISLCQTMHSSPSNSFQTQSPPHMALRYINCQSQLNLLSPSTPVQAKTSVSAGAQCFNSRIVPHPPAAQKLRSRQYSLPPPQQLQYSLALTHMNPAHKAAPSTNPGRPISHAPEPCPQVQPQDGHLFFSDLKQQGKSQMENPMLMHSPQSNCALQHHPVMPSMEPMKLDSRMYPETNPMSSPIDSLDLANTQIDFGAILDEGQQPSLVPDTLSPNVVHNPSQVSSCLMAPCNSLPLQTGRSNMAVTDMNSMLTTLAGESKFLNTLSE
SIO_010081: gli1
subclass of: SO_0000673
so part of: gli1
location: complement(join(2856442..2858930,2859637..2859940,2861828..2861930,2862073..2862233,2870280..2870444,2870568..2870717,2873761..2873886,2877549..2877650,2878600..2878786,2879443..2879650,2888408..2888489))
location: region:2856442-2888489:-1
so has part: feature:2888408-2888489:-1:exon
so has part: feature:2879443-2879650:-1:exon
so has part: feature:2878600-2878786:-1:exon
so has part: feature:2877549-2877650:-1:exon
so has part: feature:2873761-2873886:-1:exon
so has part: feature:2870568-2870717:-1:exon
so has part: feature:2870280-2870444:-1:exon
so has part: feature:2862073-2862233:-1:exon
so has part: feature:2861828-2861930:-1:exon
so has part: feature:2859637-2859940:-1:exon
so has part: feature:2856442-2858930:-1:exon

XP_048474924.1
type: Protein
SIO_000068: ncbiprotein

position:2856442:-1
position: 2856442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2888489:-1
position: 2888489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2888408-2888489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2879443-2879650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2878600-2878786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2877549-2877650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2873761-2873886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2870568-2870717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2870280-2870444:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2862073-2862233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2861828-2861930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2859637-2859940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2856442-2858930:-1:exon

LOC109922195
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109922195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3083689..3222145
location: region:3083689-3222145:1
so has part: feature:3083689-3222145:1:exon
subclass of: SO_0000010

109922195
type: Gene
SIO_000068: ncbigene

position:3083689:1
position: 3083689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3222145:1
position: 3222145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083689-3222145:1:exon

LOC109922195
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109922195
product: R3H domain-containing protein 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618837.1
SIO_010081: LOC109922195
subclass of: SO_0000673
so part of: LOC109922195
location: join(3083689..3083893,3085934..3085975,3091581..3091670,3094489..3094621,3103797..3103875,3145987..3146046,3148099..3148239,3150600..3150708,3152186..3152281,3153265..3153296,3155669..3155895,3157545..3157699,3185230..3185331,3195195..3195425,3203608..3203731,3203816..3203835,3207212..3207363,3210647..3210747,3213835..3214004,3218407..3218551,3218974..3219074,3221302..3221652,3221765..3222145)
location: region:3083689-3222145:1
so has part: feature:3083689-3083893:1:exon
so has part: feature:3085934-3085975:1:exon
so has part: feature:3091581-3091670:1:exon
so has part: feature:3094489-3094621:1:exon
so has part: feature:3103797-3103875:1:exon
so has part: feature:3145987-3146046:1:exon
so has part: feature:3148099-3148239:1:exon
so has part: feature:3150600-3150708:1:exon
so has part: feature:3152186-3152281:1:exon
so has part: feature:3153265-3153296:1:exon
so has part: feature:3155669-3155895:1:exon
so has part: feature:3157545-3157699:1:exon
so has part: feature:3185230-3185331:1:exon
so has part: feature:3195195-3195425:1:exon
so has part: feature:3203608-3203731:1:exon
so has part: feature:3203816-3203835:1:exon
so has part: feature:3207212-3207363:1:exon
so has part: feature:3210647-3210747:1:exon
so has part: feature:3213835-3214004:1:exon
so has part: feature:3218407-3218551:1:exon
so has part: feature:3218974-3219074:1:exon
so has part: feature:3221302-3221652:1:exon
so has part: feature:3221765-3222145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3083689-3083893:1:exon

position:3083893:1
position: 3083893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3085934-3085975:1:exon

position:3085934:1
position: 3085934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3085975:1
position: 3085975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3091581-3091670:1:exon

position:3091581:1
position: 3091581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3091670:1
position: 3091670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3094489-3094621:1:exon

position:3094489:1
position: 3094489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3094621:1
position: 3094621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3103797-3103875:1:exon

position:3103797:1
position: 3103797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3103875:1
position: 3103875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3145987-3146046:1:exon

position:3145987:1
position: 3145987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146046:1
position: 3146046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3148099-3148239:1:exon

position:3148099:1
position: 3148099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148239:1
position: 3148239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3150600-3150708:1:exon

position:3150600:1
position: 3150600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150708:1
position: 3150708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3152186-3152281:1:exon

position:3152186:1
position: 3152186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152281:1
position: 3152281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3153265-3153296:1:exon

position:3153265:1
position: 3153265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3153296:1
position: 3153296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3155669-3155895:1:exon

position:3155669:1
position: 3155669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3155895:1
position: 3155895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3157545-3157699:1:exon

position:3157545:1
position: 3157545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3157699:1
position: 3157699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3185230-3185331:1:exon

position:3185230:1
position: 3185230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3185331:1
position: 3185331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3195195-3195425:1:exon

position:3195195:1
position: 3195195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3195425:1
position: 3195425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3203608-3203731:1:exon

position:3203608:1
position: 3203608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3203731:1
position: 3203731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3203816-3203835:1:exon

position:3203816:1
position: 3203816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3203835:1
position: 3203835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3207212-3207363:1:exon

position:3207212:1
position: 3207212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3207363:1
position: 3207363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3210647-3210747:1:exon

position:3210647:1
position: 3210647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3210747:1
position: 3210747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3213835-3214004:1:exon

position:3213835:1
position: 3213835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3214004:1
position: 3214004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3218407-3218551:1:exon

position:3218407:1
position: 3218407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3218551:1
position: 3218551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3218974-3219074:1:exon

position:3218974:1
position: 3218974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3219074:1
position: 3219074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3221302-3221652:1:exon

position:3221302:1
position: 3221302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3221652:1
position: 3221652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3221765-3222145:1:exon

position:3221765:1
position: 3221765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109922195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109922195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2
translation: MSNSNNTQETLEIMKESEKKLVEESLIKNKSAFRTSSKEEVEKDGEDPNAQLDFQRRTQNHGHSRKRSKSNSKLKLVRSLAVCEESSHPFTCDGPQEIQDVIQLQFTCPSDKEEERPSKDGSEKEDKEKKEKLEKVPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILDFIGDNNNQYKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTINTRIPEQRFSDHIKDEKSMDFQKRFILKRDDTSLDKDDNQMRVPLRDDRRSKSIEEREEEYQRVRDRIFARESSYNGYLMESRGNRECLSRASSSRQSSTENELKTSEPRPWSSTDSDSSNRSLKPPVTKASSFSGISILTRGDSIGSSKSGNRVSKTGLPLGTPELTSSSYVQASAQQPGRTVLSNSAQQQQLPPTPQQQPMTNHMITQPLPSLQPSAQPIQYSATSCPQVLLPVSPPQQYTMPEDLGNQFGQMTLSRQGSTEAPETTSAVFQAPVISQQPGYIIASPGQSLSAPPYSASGHPTAQQVLQPQGYIQPPQQIPVSYYPPGQYQSSNQQYRPLSQVPYNSQRSQQLPQPTQQTVFMFQLLVPMSSDSQVVVQQTYQQPVMVPSQSVQGTLPAGGVPVYYSVIPPSQQNSTSQSVGFLQPPGPEQYQMPQSPSPCNPAQMQQQYTGVPAPSHGVVVMQLSVPNGPQPPQPPLLPQWNQCKYYSVEQRGQKPTELYNPDNPTQVNAQLNSPLNSPTQSPTPSPVTNVTNVCPALAPLPLIAQFSRPVGPAQGDTRYSLLGQPLQYNLPVCPPPVIHGQCQYSTHQNYLACFPFFISVVGRILEVTDLPEGITRTEADKLFSQLSMSGAKIQWLKDSQQRSSGSGDCNRATENSKNAGDLAALYTIVAVFPSTMAAQNATIRLNNSTNRFKLRTAKRSYDLRILERASSQ
SIO_010081: LOC109922195
subclass of: SO_0000673
so part of: LOC109922195
location: join(3083729..3083893,3085934..3085975,3091581..3091670,3094489..3094621,3103797..3103875,3145987..3146046,3148099..3148239,3150600..3150708,3152186..3152281,3153265..3153296,3155669..3155895,3157545..3157699,3185230..3185331,3195195..3195425,3203608..3203731,3203816..3203835,3207212..3207363,3210647..3210747,3213835..3214004,3218407..3218551,3218974..3219074,3221302..3221652,3221765..3221788)
location: region:3083729-3221788:1
so has part: feature:3083729-3083893:1:exon
so has part: feature:3085934-3085975:1:exon
so has part: feature:3091581-3091670:1:exon
so has part: feature:3094489-3094621:1:exon
so has part: feature:3103797-3103875:1:exon
so has part: feature:3145987-3146046:1:exon
so has part: feature:3148099-3148239:1:exon
so has part: feature:3150600-3150708:1:exon
so has part: feature:3152186-3152281:1:exon
so has part: feature:3153265-3153296:1:exon
so has part: feature:3155669-3155895:1:exon
so has part: feature:3157545-3157699:1:exon
so has part: feature:3185230-3185331:1:exon
so has part: feature:3195195-3195425:1:exon
so has part: feature:3203608-3203731:1:exon
so has part: feature:3203816-3203835:1:exon
so has part: feature:3207212-3207363:1:exon
so has part: feature:3210647-3210747:1:exon
so has part: feature:3213835-3214004:1:exon
so has part: feature:3218407-3218551:1:exon
so has part: feature:3218974-3219074:1:exon
so has part: feature:3221302-3221652:1:exon
so has part: feature:3221765-3221788:1:exon

XP_048474794.1
type: Protein
SIO_000068: ncbiprotein

position:3083729:1
position: 3083729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3221788:1
position: 3221788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083729-3083893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3085934-3085975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3091581-3091670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3094489-3094621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3103797-3103875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3145987-3146046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3148099-3148239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150600-3150708:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3152186-3152281:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3153265-3153296:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3155669-3155895:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3157545-3157699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3185230-3185331:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3195195-3195425:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3203608-3203731:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3203816-3203835:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3207212-3207363:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3210647-3210747:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3213835-3214004:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3218407-3218551:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3218974-3219074:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3221302-3221652:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3221765-3221788:1:exon

LOC109925232
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3346583..3424227
location: region:3346583-3424227:1
so has part: feature:3346583-3424227:1:exon
subclass of: SO_0000010

109925232
type: Gene
SIO_000068: ncbigene

position:3346583:1
position: 3346583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3424227:1
position: 3424227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3346583-3424227:1:exon

LOC109925232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925232
product: collagen alpha-1(II) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618838.1
SIO_010081: LOC109925232
subclass of: SO_0000673
so part of: LOC109925232
location: join(3346583..3346695,3350089..3350301,3351820..3351836,3360182..3360214,3360577..3360609,3360714..3360767,3361403..3361504,3364369..3364446,3367809..3367853,3368024..3368077,3368548..3368601,3368717..3368770,3369603..3369656,3369844..3369897,3372107..3372151,3372399..3372452,3373220..3373264,3373970..3374023,3380797..3380895,3381378..3381422,3382695..3382793,3384424..3384477,3384924..3385031,3385352..3385405,3386931..3387029,3389931..3389984,3390687..3390785,3391000..3391053,3393052..3393105,3393497..3393550,3394253..3394306,3395310..3395354,3398058..3398156,3398249..3398356,3399626..3399679,3401808..3401861,3402748..3402909,3403795..3403902,3411740..3411847,3411941..3411994,3414464..3414517,3415227..3415334,3418969..3419022,3419753..3419860,3420016..3420304,3420699..3420886,3421892..3422134,3422709..3424227)
location: region:3346583-3424227:1
so has part: feature:3346583-3346695:1:exon
so has part: feature:3350089-3350301:1:exon
so has part: feature:3351820-3351836:1:exon
so has part: feature:3360182-3360214:1:exon
so has part: feature:3360577-3360609:1:exon
so has part: feature:3360714-3360767:1:exon
so has part: feature:3361403-3361504:1:exon
so has part: feature:3364369-3364446:1:exon
so has part: feature:3367809-3367853:1:exon
so has part: feature:3368024-3368077:1:exon
so has part: feature:3368548-3368601:1:exon
so has part: feature:3368717-3368770:1:exon
so has part: feature:3369603-3369656:1:exon
so has part: feature:3369844-3369897:1:exon
so has part: feature:3372107-3372151:1:exon
so has part: feature:3372399-3372452:1:exon
so has part: feature:3373220-3373264:1:exon
so has part: feature:3373970-3374023:1:exon
so has part: feature:3380797-3380895:1:exon
so has part: feature:3381378-3381422:1:exon
so has part: feature:3382695-3382793:1:exon
so has part: feature:3384424-3384477:1:exon
so has part: feature:3384924-3385031:1:exon
so has part: feature:3385352-3385405:1:exon
so has part: feature:3386931-3387029:1:exon
so has part: feature:3389931-3389984:1:exon
so has part: feature:3390687-3390785:1:exon
so has part: feature:3391000-3391053:1:exon
so has part: feature:3393052-3393105:1:exon
so has part: feature:3393497-3393550:1:exon
so has part: feature:3394253-3394306:1:exon
so has part: feature:3395310-3395354:1:exon
so has part: feature:3398058-3398156:1:exon
so has part: feature:3398249-3398356:1:exon
so has part: feature:3399626-3399679:1:exon
so has part: feature:3401808-3401861:1:exon
so has part: feature:3402748-3402909:1:exon
so has part: feature:3403795-3403902:1:exon
so has part: feature:3411740-3411847:1:exon
so has part: feature:3411941-3411994:1:exon
so has part: feature:3414464-3414517:1:exon
so has part: feature:3415227-3415334:1:exon
so has part: feature:3418969-3419022:1:exon
so has part: feature:3419753-3419860:1:exon
so has part: feature:3420016-3420304:1:exon
so has part: feature:3420699-3420886:1:exon
so has part: feature:3421892-3422134:1:exon
so has part: feature:3422709-3424227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3346583-3346695:1:exon

position:3346695:1
position: 3346695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3350089-3350301:1:exon

position:3350089:1
position: 3350089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3350301:1
position: 3350301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3351820-3351836:1:exon

position:3351820:1
position: 3351820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3351836:1
position: 3351836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3360182-3360214:1:exon

position:3360182:1
position: 3360182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360214:1
position: 3360214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3360577-3360609:1:exon

position:3360577:1
position: 3360577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360609:1
position: 3360609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3360714-3360767:1:exon

position:3360714:1
position: 3360714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360767:1
position: 3360767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3361403-3361504:1:exon

position:3361403:1
position: 3361403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3361504:1
position: 3361504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3364369-3364446:1:exon

position:3364369:1
position: 3364369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3364446:1
position: 3364446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3367809-3367853:1:exon

position:3367809:1
position: 3367809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3367853:1
position: 3367853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3368024-3368077:1:exon

position:3368024:1
position: 3368024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368077:1
position: 3368077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3368548-3368601:1:exon

position:3368548:1
position: 3368548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368601:1
position: 3368601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3368717-3368770:1:exon

position:3368717:1
position: 3368717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368770:1
position: 3368770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3369603-3369656:1:exon

position:3369603:1
position: 3369603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3369656:1
position: 3369656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3369844-3369897:1:exon

position:3369844:1
position: 3369844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3369897:1
position: 3369897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3372107-3372151:1:exon

position:3372107:1
position: 3372107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3372151:1
position: 3372151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3372399-3372452:1:exon

position:3372399:1
position: 3372399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3372452:1
position: 3372452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3373220-3373264:1:exon

position:3373220:1
position: 3373220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3373264:1
position: 3373264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3373970-3374023:1:exon

position:3373970:1
position: 3373970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3374023:1
position: 3374023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3380797-3380895:1:exon

position:3380797:1
position: 3380797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3380895:1
position: 3380895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3381378-3381422:1:exon

position:3381378:1
position: 3381378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3381422:1
position: 3381422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3382695-3382793:1:exon

position:3382695:1
position: 3382695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3382793:1
position: 3382793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3384424-3384477:1:exon

position:3384424:1
position: 3384424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3384477:1
position: 3384477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3384924-3385031:1:exon

position:3384924:1
position: 3384924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3385031:1
position: 3385031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3385352-3385405:1:exon

position:3385352:1
position: 3385352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3385405:1
position: 3385405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3386931-3387029:1:exon

position:3386931:1
position: 3386931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3387029:1
position: 3387029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3389931-3389984:1:exon

position:3389931:1
position: 3389931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3389984:1
position: 3389984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3390687-3390785:1:exon

position:3390687:1
position: 3390687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390785:1
position: 3390785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3391000-3391053:1:exon

position:3391000:1
position: 3391000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3391053:1
position: 3391053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3393052-3393105:1:exon

position:3393052:1
position: 3393052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3393105:1
position: 3393105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3393497-3393550:1:exon

position:3393497:1
position: 3393497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3393550:1
position: 3393550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3394253-3394306:1:exon

position:3394253:1
position: 3394253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3394306:1
position: 3394306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3395310-3395354:1:exon

position:3395310:1
position: 3395310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3395354:1
position: 3395354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3398058-3398156:1:exon

position:3398058:1
position: 3398058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3398156:1
position: 3398156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3398249-3398356:1:exon

position:3398249:1
position: 3398249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3398356:1
position: 3398356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3399626-3399679:1:exon

position:3399626:1
position: 3399626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3399679:1
position: 3399679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:3401808-3401861:1:exon

position:3401808:1
position: 3401808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3401861:1
position: 3401861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:3402748-3402909:1:exon

position:3402748:1
position: 3402748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3402909:1
position: 3402909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:3403795-3403902:1:exon

position:3403795:1
position: 3403795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3403902:1
position: 3403902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:3411740-3411847:1:exon

position:3411740:1
position: 3411740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3411847:1
position: 3411847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:3411941-3411994:1:exon

position:3411941:1
position: 3411941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3411994:1
position: 3411994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:3414464-3414517:1:exon

position:3414464:1
position: 3414464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3414517:1
position: 3414517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:3415227-3415334:1:exon

position:3415227:1
position: 3415227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3415334:1
position: 3415334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:3418969-3419022:1:exon

position:3418969:1
position: 3418969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3419022:1
position: 3419022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:3419753-3419860:1:exon

position:3419753:1
position: 3419753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3419860:1
position: 3419860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:3420016-3420304:1:exon

position:3420016:1
position: 3420016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3420304:1
position: 3420304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:3420699-3420886:1:exon

position:3420699:1
position: 3420699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3420886:1
position: 3420886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:3421892-3422134:1:exon

position:3421892:1
position: 3421892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3422134:1
position: 3422134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:3422709-3424227:1:exon

position:3422709:1
position: 3422709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(II) chain-like
translation: MFRFLDSRTLLLLAAVQALLITVVRCQDRDIQDLKVNCLQDGQMYSDKDVWKPEPCRICVCDSGIILCDEIICEDLKDCPNPEIPSGECCPVCQKDRPAPSDRQRGPKGQKGEPGDIKDVVGPRGPPGPQGPPGEQGLRGPRGEKGEAGAPGPRGRDGVPGTPGNPGPPGPPGSSGMSDFGGNFASQMARGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGAPGPQGFQGSPGEPGESGAAGPMGPRGPPGPAGKPGSDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAVGAKGEAGAAGENGAPGPMGPRGLPGERGRPGAPGSAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGSRGESGSPGSPGPAGAPGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQQGEPGVAGFKGEAGPKGEPGPAGPQGAPGPAGEEGKRGPRGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGAPGVHGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGATGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEAGKAGEKGLIGAPGLRGLPGKDGETGPQGPSGPSGLAGERGEQGPPGPPGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGPTGPRGERGFPGERGSPGSQGLQGPRGLPGTPGADGPKGAAGAPGPNGAQGPPGLQGMPGERGAAGIPGPKGDRGDNGEKGPEGAPGKDGGRGATGFPGAAGRVGPPGPNGNPGPVGPPGAPGKDGPKGLRGDPGHAGRAGDPGLQGPAGAAGEKGEPGEDGPPGADGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPSGEPGREGNPGADGPPGRDGATGMKGAQGPMGPSGPAGARGMPGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGPPGDQGAVGVAGPAGPRGPPGPVGPPGKDGANGLTGPIGPPGPRGRSGETGPAGPPGNAGPPGPPGPPGPGIDMSAFAGLSQPEKAPDPLRYFRADQAAPFLRQHDAEVDATLKSLNNQIENIRSPEGSKKNPARTCRDLKLCHSDWKSGDYWIDPNQGCTLDAIKVFCNMETGETCVYPNPTSIPRKNWWTSKGKDKKHVWFGETMNGGFHFSYGDGSLTANTAAIQMTFLRLLSTEASQNITYHCKNSIAYMDRASGNLKKALLLQGSNDIEIRAEGNSRFTYTVLEDGCTKHTGKWGKTVIEYRSQKTTRLPIVDVAPLDIGGSDQEFGVDIGAVCFL
SIO_010081: LOC109925232
subclass of: SO_0000673
so part of: LOC109925232
location: join(3346602..3346695,3350089..3350301,3351820..3351836,3360182..3360214,3360577..3360609,3360714..3360767,3361403..3361504,3364369..3364446,3367809..3367853,3368024..3368077,3368548..3368601,3368717..3368770,3369603..3369656,3369844..3369897,3372107..3372151,3372399..3372452,3373220..3373264,3373970..3374023,3380797..3380895,3381378..3381422,3382695..3382793,3384424..3384477,3384924..3385031,3385352..3385405,3386931..3387029,3389931..3389984,3390687..3390785,3391000..3391053,3393052..3393105,3393497..3393550,3394253..3394306,3395310..3395354,3398058..3398156,3398249..3398356,3399626..3399679,3401808..3401861,3402748..3402909,3403795..3403902,3411740..3411847,3411941..3411994,3414464..3414517,3415227..3415334,3418969..3419022,3419753..3419860,3420016..3420304,3420699..3420886,3421892..3422134,3422709..3422855)
location: region:3346602-3422855:1
so has part: feature:3346602-3346695:1:exon
so has part: feature:3350089-3350301:1:exon
so has part: feature:3351820-3351836:1:exon
so has part: feature:3360182-3360214:1:exon
so has part: feature:3360577-3360609:1:exon
so has part: feature:3360714-3360767:1:exon
so has part: feature:3361403-3361504:1:exon
so has part: feature:3364369-3364446:1:exon
so has part: feature:3367809-3367853:1:exon
so has part: feature:3368024-3368077:1:exon
so has part: feature:3368548-3368601:1:exon
so has part: feature:3368717-3368770:1:exon
so has part: feature:3369603-3369656:1:exon
so has part: feature:3369844-3369897:1:exon
so has part: feature:3372107-3372151:1:exon
so has part: feature:3372399-3372452:1:exon
so has part: feature:3373220-3373264:1:exon
so has part: feature:3373970-3374023:1:exon
so has part: feature:3380797-3380895:1:exon
so has part: feature:3381378-3381422:1:exon
so has part: feature:3382695-3382793:1:exon
so has part: feature:3384424-3384477:1:exon
so has part: feature:3384924-3385031:1:exon
so has part: feature:3385352-3385405:1:exon
so has part: feature:3386931-3387029:1:exon
so has part: feature:3389931-3389984:1:exon
so has part: feature:3390687-3390785:1:exon
so has part: feature:3391000-3391053:1:exon
so has part: feature:3393052-3393105:1:exon
so has part: feature:3393497-3393550:1:exon
so has part: feature:3394253-3394306:1:exon
so has part: feature:3395310-3395354:1:exon
so has part: feature:3398058-3398156:1:exon
so has part: feature:3398249-3398356:1:exon
so has part: feature:3399626-3399679:1:exon
so has part: feature:3401808-3401861:1:exon
so has part: feature:3402748-3402909:1:exon
so has part: feature:3403795-3403902:1:exon
so has part: feature:3411740-3411847:1:exon
so has part: feature:3411941-3411994:1:exon
so has part: feature:3414464-3414517:1:exon
so has part: feature:3415227-3415334:1:exon
so has part: feature:3418969-3419022:1:exon
so has part: feature:3419753-3419860:1:exon
so has part: feature:3420016-3420304:1:exon
so has part: feature:3420699-3420886:1:exon
so has part: feature:3421892-3422134:1:exon
so has part: feature:3422709-3422855:1:exon

XP_048474795.1
type: Protein
SIO_000068: ncbiprotein

position:3346602:1
position: 3346602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3422855:1
position: 3422855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3346602-3346695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3350089-3350301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3351820-3351836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3360182-3360214:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3360577-3360609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3360714-3360767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3361403-3361504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3364369-3364446:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3367809-3367853:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3368024-3368077:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3368548-3368601:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3368717-3368770:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3369603-3369656:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3369844-3369897:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3372107-3372151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3372399-3372452:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3373220-3373264:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3373970-3374023:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3380797-3380895:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3381378-3381422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3382695-3382793:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3384424-3384477:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3384924-3385031:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3385352-3385405:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3386931-3387029:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3389931-3389984:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3390687-3390785:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3391000-3391053:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3393052-3393105:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3393497-3393550:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3394253-3394306:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3395310-3395354:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3398058-3398156:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3398249-3398356:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3399626-3399679:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3401808-3401861:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3402748-3402909:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3403795-3403902:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:3411740-3411847:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:3411941-3411994:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:3414464-3414517:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:3415227-3415334:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:3418969-3419022:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:3419753-3419860:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:3420016-3420304:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:3420699-3420886:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:3421892-3422134:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:3422709-3422855:1:exon

LOC109924733
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3433156..3473677)
location: region:3433156-3473677:-1
so has part: feature:3433156-3473677:-1:exon
subclass of: SO_0000010

109924733
type: Gene
SIO_000068: ncbigene

position:3433156:-1
position: 3433156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473677:-1
position: 3473677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3433156-3473677:-1:exon

LOC109924733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924733
product: transmembrane protein 106C-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619007.1
SIO_010081: LOC109924733
subclass of: SO_0000673
so part of: LOC109924733
location: complement(join(3433156..3435980,3444370..3444423,3449524..3449573,3449924..3450064,3458549..3458708,3462457..3462520,3473413..3473677))
location: region:3433156-3473677:-1
so has part: feature:3473413-3473677:-1:exon
so has part: feature:3462457-3462520:-1:exon
so has part: feature:3458549-3458708:-1:exon
so has part: feature:3449924-3450064:-1:exon
so has part: feature:3449524-3449573:-1:exon
so has part: feature:3444370-3444423:-1:exon
so has part: feature:3433156-3435980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3473413-3473677:-1:exon

position:3473413:-1
position: 3473413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3462457-3462520:-1:exon

position:3462457:-1
position: 3462457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3462520:-1
position: 3462520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3458549-3458708:-1:exon

position:3458549:-1
position: 3458549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3458708:-1
position: 3458708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3449924-3450064:-1:exon

position:3449924:-1
position: 3449924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450064:-1
position: 3450064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3449524-3449573:-1:exon

position:3449524:-1
position: 3449524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3449573:-1
position: 3449573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3444370-3444423:-1:exon

position:3444370:-1
position: 3444370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444423:-1
position: 3444423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3433156-3435980:-1:exon

position:3435980:-1
position: 3435980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109924733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C-like
translation: MGSQVSARTGRGRLRKERALDAESSEDLLGDDRQEDIARFPYVEFTGKDSVTCPTCQGTGRIPKGLVNELVALIPYSDQRLQPQRTKLYVFISIFVCLLISGLVVFFLFPRSVVVNDDGIRVVLVKFDNNNSRVFIDMTSTLNISNSNFYTVSVDSLTCQVQYMKTVIGTKQLSNVSVIPPLSEKQVNYTVRMEFSGSLTYVYTFCTMPSIKVHNIVVFMQTTVKSSYLGHPSQNSLEAYRYLDCGSNSTVYRRPPLKH
SIO_010081: LOC109924733
subclass of: SO_0000673
so part of: LOC109924733
location: complement(join(3435863..3435980,3444370..3444423,3449524..3449573,3449924..3450064,3458549..3458708,3462457..3462520,3473413..3473605))
location: region:3435863-3473605:-1
so has part: feature:3473413-3473605:-1:exon
so has part: feature:3462457-3462520:-1:exon
so has part: feature:3458549-3458708:-1:exon
so has part: feature:3449924-3450064:-1:exon
so has part: feature:3449524-3449573:-1:exon
so has part: feature:3444370-3444423:-1:exon
so has part: feature:3435863-3435980:-1:exon

XP_048474964.1
type: Protein
SIO_000068: ncbiprotein

position:3435863:-1
position: 3435863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473605:-1
position: 3473605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3473413-3473605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3462457-3462520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3458549-3458708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3449924-3450064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3449524-3449573:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3444370-3444423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3435863-3435980:-1:exon

LOC125487413
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487413
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3520594..3521553
location: region:3520594-3521553:1
so has part: feature:3520594-3521553:1:exon
subclass of: SO_0000010

125487413
type: Gene
SIO_000068: ncbigene

position:3520594:1
position: 3520594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3521553:1
position: 3521553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3520594-3521553:1:exon

LOC125487413
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487413
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048618839.1
SIO_010081: LOC125487413
subclass of: SO_0000673
so part of: LOC125487413
location: 3520594..3521553
location: region:3520594-3521553:1
so has part: feature:3520594-3521553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3520594-3521553:1:exon

LOC125487413
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487413
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MNLIMKILCFVLLTVNIATIAILSWGKCGLSKCITRYLVSMAVTDLLVVFVDVIFDQIGDSYFPDSFLNITAICSLRGVLRYAASDSSVWLTVSFTFDRFITICCQKLKRKYCTEKTAAIVISTICVLSCVKNIPWYFQYEPYEIIDNIPWYCFRNSLEYYVSSMWSTFELLQYSITPFIPFLLILTLNALTVRHILAANRIRRALRNPKSSEEEDDPETEHRRKSIILLFSISSSFILLWVTHVIHSLLQRISTMSYYRIHVDSTTAEQIGDALRLLSCCTNTCIYAVTQTKFREELKNALKYPFNLISCLLMKHGTS
SIO_010081: LOC125487413
subclass of: SO_0000673
so part of: LOC125487413
location: 3520594..3521553
location: region:3520594-3521553:1
so has part: feature:3520594-3521553:1:exon

XP_048474796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3520594-3521553:1:exon

LOC109937886
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109937886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3552426..3590472)
location: region:3552426-3590472:-1
so has part: feature:3552426-3590472:-1:exon
subclass of: SO_0000010

109937886
type: Gene
SIO_000068: ncbigene

position:3552426:-1
position: 3552426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3590472:-1
position: 3590472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3552426-3590472:-1:exon

LOC109937886
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937886
product: zinc finger protein 148-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618840.1
SIO_010081: LOC109937886
subclass of: SO_0000673
so part of: LOC109937886
location: complement(join(3552426..3554332,3563016..3563134,3567557..3567674,3586387..3586584,3589848..3590189,3590333..3590472))
location: region:3552426-3590472:-1
so has part: feature:3590333-3590472:-1:exon
so has part: feature:3589848-3590189:-1:exon
so has part: feature:3586387-3586584:-1:exon
so has part: feature:3567557-3567674:-1:exon
so has part: feature:3563016-3563134:-1:exon
so has part: feature:3552426-3554332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3590333-3590472:-1:exon

position:3590333:-1
position: 3590333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3589848-3590189:-1:exon

position:3589848:-1
position: 3589848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3590189:-1
position: 3590189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3586387-3586584:-1:exon

position:3586387:-1
position: 3586387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3586584:-1
position: 3586584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3567557-3567674:-1:exon

position:3567557:-1
position: 3567557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3567674:-1
position: 3567674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3563016-3563134:-1:exon

position:3563016:-1
position: 3563016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3563134:-1
position: 3563134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3552426-3554332:-1:exon

position:3554332:-1
position: 3554332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109937886
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 148-like
translation: MCCFSTRREEQTYFGQMSRVDGISDLPSVPVGGQQPLLEYGRAPQQASLVDNAMLQDNTSEVGILQDSSVSHEMVGSHRLLQSGAISHQGMITGSDPMTQTTLRNADGPDSHAAVTVTQSLPCATQVLGKSRVLDGVEQLDGKKQSEQEDLEKLRENENLLKLGENEELLKLRQHEELMKKQKSKKIRTPSKLRRNLDFVLLLGEKPFQCSQCSMRFIQKYLLQRHEKIHTGEKPFHCDECDMRFIQKYHMERHKRTHSGEKPYQCEYCLQYFSRTDRLLKHRRMCHENQGKAPGKNPAMKTEPIILAINAENSFLSPQKDIINPRKKVKTAEKSALATLDKEETGNPAEGKMDKGECVEYYTSNLKVKDEYKVEQCSLVVAHSSQNNDHLGEAYQNQMNLLPTKLVLKKVSPKKNQKTTEELAQTLPVSGNFDATKVNKYTYAMVDNPDLLTMEGPGADQGQDASRKPGGNSNYDDAMQFVKKKRFLQGTSSTSREYALTVGQIPIQPAVTQAANTPVGDTSGSTPMLVQPSNTDPKSSQDKSGIPDEVLQTLLDHYTNKANGQVPFSVSDTQVSSNITVSSTDITNVPPSERVESSQPAVTDNCNMLHEYSKFLQQALERTCHNDSYSAEQGLAYETETHPLTGSLPVQPLFSTLERQVFATMVTQHGFRPEVGAPLRIPSQKTQYSLLTGESQHPFAFIPTVTSSNSISAPPDFIEQVNTQKKREEPPAHHNHQMDTFGQDSRFSAAGGEMTPSFNNSTGGQVNLRIRQGSSDFSEFSLVNVPEARDQMSASSDVTGGQAFR
SIO_010081: LOC109937886
subclass of: SO_0000673
so part of: LOC109937886
location: complement(join(3552728..3554332,3563016..3563134,3567557..3567674,3586387..3586584,3589848..3590189,3590333..3590368))
location: region:3552728-3590368:-1
so has part: feature:3590333-3590368:-1:exon
so has part: feature:3589848-3590189:-1:exon
so has part: feature:3586387-3586584:-1:exon
so has part: feature:3567557-3567674:-1:exon
so has part: feature:3563016-3563134:-1:exon
so has part: feature:3552728-3554332:-1:exon

XP_048474797.1
type: Protein
SIO_000068: ncbiprotein

position:3552728:-1
position: 3552728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3590368:-1
position: 3590368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3590333-3590368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3589848-3590189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3586387-3586584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3567557-3567674:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3563016-3563134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3552728-3554332:-1:exon

csad
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: csad
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3613711..3652728)
location: region:3613711-3652728:-1
so has part: feature:3613711-3652728:-1:exon
subclass of: SO_0000010

109926243
type: Gene
SIO_000068: ncbigene

position:3613711:-1
position: 3613711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3652728:-1
position: 3652728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3613711-3652728:-1:exon

csad
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: csad
product: cysteine sulfinic acid decarboxylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618841.1
SIO_010081: csad
subclass of: SO_0000673
so part of: csad
location: complement(join(3613711..3615655,3616330..3616419,3619010..3619213,3620929..3621010,3622457..3622521,3625188..3625304,3628372..3628521,3632076..3632191,3636371..3636477,3639628..3639718,3643351..3643477,3646273..3646433,3652686..3652728))
location: region:3613711-3652728:-1
so has part: feature:3652686-3652728:-1:exon
so has part: feature:3646273-3646433:-1:exon
so has part: feature:3643351-3643477:-1:exon
so has part: feature:3639628-3639718:-1:exon
so has part: feature:3636371-3636477:-1:exon
so has part: feature:3632076-3632191:-1:exon
so has part: feature:3628372-3628521:-1:exon
so has part: feature:3625188-3625304:-1:exon
so has part: feature:3622457-3622521:-1:exon
so has part: feature:3620929-3621010:-1:exon
so has part: feature:3619010-3619213:-1:exon
so has part: feature:3616330-3616419:-1:exon
so has part: feature:3613711-3615655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3652686-3652728:-1:exon

position:3652686:-1
position: 3652686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3646273-3646433:-1:exon

position:3646273:-1
position: 3646273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3646433:-1
position: 3646433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3643351-3643477:-1:exon

position:3643351:-1
position: 3643351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3643477:-1
position: 3643477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3639628-3639718:-1:exon

position:3639628:-1
position: 3639628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3639718:-1
position: 3639718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3636371-3636477:-1:exon

position:3636371:-1
position: 3636371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3636477:-1
position: 3636477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3632076-3632191:-1:exon

position:3632076:-1
position: 3632076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3632191:-1
position: 3632191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3628372-3628521:-1:exon

position:3628372:-1
position: 3628372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3628521:-1
position: 3628521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3625188-3625304:-1:exon

position:3625188:-1
position: 3625188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3625304:-1
position: 3625304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3622457-3622521:-1:exon

position:3622457:-1
position: 3622457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3622521:-1
position: 3622521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3620929-3621010:-1:exon

position:3620929:-1
position: 3620929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3621010:-1
position: 3621010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3619010-3619213:-1:exon

position:3619010:-1
position: 3619010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3619213:-1
position: 3619213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3616330-3616419:-1:exon

position:3616330:-1
position: 3616330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3616419:-1
position: 3616419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3613711-3615655:-1:exon

position:3615655:-1
position: 3615655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

csad
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: csad
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(3628438..3628440),aa:OTHER)
transl except: (pos:complement(3628411..3628413),aa:OTHER)
product: LOW QUALITY PROTEIN: cysteine sulfinic acid decarboxylase
translation: MVIIFAYISEHTSKKELNGLSRKHPSTVDSVLLDGPLTDPEAGEQFVQDAFQIILEEAIKKGTNINEKVCEWREPDELQDLLDLDLVDAGEPPEKLLERCQDIIRYSVKTAHPRFCNQLFAGLDHHSLVGRYITETLNTSQYTYEIAPVFVLMEEVVLRKLRTFVGWKCGDGIFCPGGSMSNMYAMNVARYKLFPEIKKRGLWDMPRLAVFTSEECHYSVTKGAAFQGLGTDNVYLVKADERXVTGCGVSFXVTVSLKEECKYSDGVVPFLVSATAGTTVFGAFDPLPEIADICEKYGIWLHVDAAWGGSALISRKHRDLLTGIKRADSVAWNPHKMLMAGLQCSAFLLKDNTDLLKTCHSANASYLFQQDKFYNVCYDIGDQSLQCGRKVDCLKLWLMWKAVGTLGLEKRVDRAFACTRFPQYVNVCFWYIPPSLRGKEQSSNFWQNLGKVAPFIKERMMKRGSMMVGYQHHGTKVNFFRQVLISPQVSREDVDFFLDEIEHLGSDFQLE
SIO_010081: csad
subclass of: SO_0000673
so part of: csad
location: complement(join(3615473..3615655,3616330..3616419,3619010..3619213,3620929..3621010,3622457..3622521,3625188..3625304,3628372..3628521,3632076..3632191,3636371..3636477,3639628..3639718,3643351..3643477,3646273..3646433,3652686..3652728))
location: region:3615473-3652728:-1
so has part: feature:3652686-3652728:-1:exon
so has part: feature:3646273-3646433:-1:exon
so has part: feature:3643351-3643477:-1:exon
so has part: feature:3639628-3639718:-1:exon
so has part: feature:3636371-3636477:-1:exon
so has part: feature:3632076-3632191:-1:exon
so has part: feature:3628372-3628521:-1:exon
so has part: feature:3625188-3625304:-1:exon
so has part: feature:3622457-3622521:-1:exon
so has part: feature:3620929-3621010:-1:exon
so has part: feature:3619010-3619213:-1:exon
so has part: feature:3616330-3616419:-1:exon
so has part: feature:3615473-3615655:-1:exon

XP_048474798.1
type: Protein
SIO_000068: ncbiprotein

position:3615473:-1
position: 3615473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3652686-3652728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3646273-3646433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3643351-3643477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3639628-3639718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3636371-3636477:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3632076-3632191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3628372-3628521:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3625188-3625304:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3622457-3622521:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3620929-3621010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3619010-3619213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3616330-3616419:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3615473-3615655:-1:exon

LOC125487424
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3652059..3675227)
location: region:3652059-3675227:-1
so has part: feature:3652059-3675227:-1:exon
subclass of: SO_0000010

125487424
type: Gene
SIO_000068: ncbigene

position:3652059:-1
position: 3652059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3675227:-1
position: 3675227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3652059-3675227:-1:exon

LOC125487424
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487424
product: G-protein coupled receptor 182-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048618895.1
SIO_010081: LOC125487424
subclass of: SO_0000673
so part of: LOC125487424
location: complement(join(3652059..3655300,3655394..3655515,3660301..3660441,3674830..3675227))
location: region:3652059-3675227:-1
so has part: feature:3674830-3675227:-1:exon
so has part: feature:3660301-3660441:-1:exon
so has part: feature:3655394-3655515:-1:exon
so has part: feature:3652059-3655300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3674830-3675227:-1:exon

position:3674830:-1
position: 3674830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3660301-3660441:-1:exon

position:3660301:-1
position: 3660301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3660441:-1
position: 3660441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3655394-3655515:-1:exon

position:3655394:-1
position: 3655394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3655515:-1
position: 3655515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3652059-3655300:-1:exon

position:3655300:-1
position: 3655300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487424
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487424
product: G-protein coupled receptor 182-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048618894.1
SIO_010081: LOC125487424
subclass of: SO_0000673
so part of: LOC125487424
location: complement(join(3652059..3655300,3655394..3655518,3660301..3660441,3674830..3675227))
location: region:3652059-3675227:-1
so has part: feature:3674830-3675227:-1:exon
so has part: feature:3660301-3660441:-1:exon
so has part: feature:3655394-3655518:-1:exon
so has part: feature:3652059-3655300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3674830-3675227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3660301-3660441:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3655394-3655518:-1:exon

position:3655518:-1
position: 3655518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3652059-3655300:-1:exon

LOC125487424
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 182-like
translation: MATPNDSLHVNNSDECYGYSCRCWISLDYKALDMSMFFFYLFILLVGLIENIIVIWINWRMEGSRKESNLYIFNMAIADMCAVLFIPLRMAETFYNYHWIWGDFLCKFDSFIYFVTLYSSIFFLTCFSVDRYISLRYPFQAQGSRDRQIRRMVCVCMWTVAVLLSIPQFVHSEIFEVVYIYCYLSHMLSLYVTSSLTLILGFIIPLPIIILSNIFTARAVKNSSNTESIKTSKIIYGYIIAFLLCWLPFYVIVFLSLLDTFLDCVVHQLVYFLYDMVECLSFSHCIINPILYNFIHKDFRDHLTASIVKYMPKRYVKEDDDISISSDTRHIVVIT
SIO_010081: LOC125487424
subclass of: SO_0000673
so part of: LOC125487424
location: complement(3654271..3655278)
location: region:3654271-3655278:-1
so has part: feature:3654271-3655278:-1:exon

XP_048474851.1
type: Protein
SIO_000068: ncbiprotein

position:3654271:-1
position: 3654271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3655278:-1
position: 3655278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3654271-3655278:-1:exon

LOC125487424
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 182-like
translation: MATPNDSLHVNNSDECYGYSCRCWISLDYKALDMSMFFFYLFILLVGLIENIIVIWINWRMEGSRKESNLYIFNMAIADMCAVLFIPLRMAETFYNYHWIWGDFLCKFDSFIYFVTLYSSIFFLTCFSVDRYISLRYPFQAQGSRDRQIRRMVCVCMWTVAVLLSIPQFVHSEIFEVVYIYCYLSHMLSLYVTSSLTLILGFIIPLPIIILSNIFTARAVKNSSNTESIKTSKIIYGYIIAFLLCWLPFYVIVFLSLLDTFLDCVVHQLVYFLYDMVECLSFSHCIINPILYNFIHKDFRDHLTASIVKYMPKRYVKEDDDISISSDTRHIVVIT
SIO_010081: LOC125487424
subclass of: SO_0000673
so part of: LOC125487424
location: complement(3654271..3655278)
location: region:3654271-3655278:-1
so has part: feature:3654271-3655278:-1:exon

XP_048474852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3654271-3655278:-1:exon

LOC125487396
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3684502..3698310
location: region:3684502-3698310:1
so has part: feature:3684502-3698310:1:exon
subclass of: SO_0000011

125487396
type: Gene
SIO_000068: ncbigene

position:3684502:1
position: 3684502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3698310:1
position: 3698310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3684502-3698310:1:exon

LOC125487396
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487396
product: uncharacterized LOC125487396
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007265871.1
SIO_010081: LOC125487396
subclass of: SO_0000673
so part of: LOC125487396
location: join(3684502..3684639,3685550..3685619,3689156..3689253,3693097..3693195,3695662..3698310)
location: region:3684502-3698310:1
so has part: feature:3684502-3684639:1:exon
so has part: feature:3685550-3685619:1:exon
so has part: feature:3689156-3689253:1:exon
so has part: feature:3693097-3693195:1:exon
so has part: feature:3695662-3698310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3684502-3684639:1:exon

position:3684639:1
position: 3684639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3685550-3685619:1:exon

position:3685550:1
position: 3685550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3685619:1
position: 3685619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3689156-3689253:1:exon

position:3689156:1
position: 3689156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3689253:1
position: 3689253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3693097-3693195:1:exon

position:3693097:1
position: 3693097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3693195:1
position: 3693195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3695662-3698310:1:exon

position:3695662:1
position: 3695662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925898
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3749842..3766784
location: region:3749842-3766784:1
so has part: feature:3749842-3766784:1:exon
subclass of: SO_0000010

109925898
type: Gene
SIO_000068: ncbigene

position:3749842:1
position: 3749842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766784:1
position: 3766784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3749842-3766784:1:exon

LOC109925898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925898
product: prostaglandin E synthase 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618798.1
SIO_010081: LOC109925898
subclass of: SO_0000673
so part of: LOC109925898
location: join(3749842..3750077,3758156..3758269,3762366..3762435,3762913..3763011,3763269..3763361,3764362..3764424,3765910..3765937,3766023..3766784)
location: region:3749842-3766784:1
so has part: feature:3749842-3750077:1:exon
so has part: feature:3758156-3758269:1:exon
so has part: feature:3762366-3762435:1:exon
so has part: feature:3762913-3763011:1:exon
so has part: feature:3763269-3763361:1:exon
so has part: feature:3764362-3764424:1:exon
so has part: feature:3765910-3765937:1:exon
so has part: feature:3766023-3766784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3749842-3750077:1:exon

position:3750077:1
position: 3750077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3758156-3758269:1:exon

position:3758156:1
position: 3758156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3758269:1
position: 3758269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3762366-3762435:1:exon

position:3762366:1
position: 3762366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762435:1
position: 3762435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3762913-3763011:1:exon

position:3762913:1
position: 3762913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3763011:1
position: 3763011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3763269-3763361:1:exon

position:3763269:1
position: 3763269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3763361:1
position: 3763361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3764362-3764424:1:exon

position:3764362:1
position: 3764362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3764424:1
position: 3764424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3765910-3765937:1:exon

position:3765910:1
position: 3765910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3765937:1
position: 3765937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3766023-3766784:1:exon

position:3766023:1
position: 3766023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925898
product: prostaglandin E synthase 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618799.1
SIO_010081: LOC109925898
subclass of: SO_0000673
so part of: LOC109925898
location: join(3749842..3750077,3758156..3758269,3762366..3762435,3762913..3763011,3763269..3763361,3765910..3765937,3766023..3766784)
location: region:3749842-3766784:1
so has part: feature:3749842-3750077:1:exon
so has part: feature:3758156-3758269:1:exon
so has part: feature:3762366-3762435:1:exon
so has part: feature:3762913-3763011:1:exon
so has part: feature:3763269-3763361:1:exon
so has part: feature:3765910-3765937:1:exon
so has part: feature:3766023-3766784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3749842-3750077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3758156-3758269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3762366-3762435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3762913-3763011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3763269-3763361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3765910-3765937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766023-3766784:1:exon

LOC109925898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin E synthase 3 isoform X1
translation: MQPASAKWYDRRDYVFVEFCVEDSKDVEINFEKEKFTFSCLGGAESVKHFNEVNLYNAIDPSDSKHKRTDRSVLCYLRKGESGQAWPRLTKEKAKLNWLKVDFNNWRDWDDDPEEEDLSSFEKFSQMMNNMGGDDDGDIPDVDGMDDDGSQDSDDEKMPDLE
SIO_010081: LOC109925898
subclass of: SO_0000673
so part of: LOC109925898
location: join(3750076..3750077,3758156..3758269,3762366..3762435,3762913..3763011,3763269..3763361,3764362..3764424,3765910..3765937,3766023..3766042)
location: region:3750076-3766042:1
so has part: feature:3750076-3750077:1:exon
so has part: feature:3758156-3758269:1:exon
so has part: feature:3762366-3762435:1:exon
so has part: feature:3762913-3763011:1:exon
so has part: feature:3763269-3763361:1:exon
so has part: feature:3764362-3764424:1:exon
so has part: feature:3765910-3765937:1:exon
so has part: feature:3766023-3766042:1:exon

XP_048474755.1
type: Protein
SIO_000068: ncbiprotein

position:3750076:1
position: 3750076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766042:1
position: 3766042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3750076-3750077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3758156-3758269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3762366-3762435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3762913-3763011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3763269-3763361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3764362-3764424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3765910-3765937:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3766023-3766042:1:exon

LOC109925898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin E synthase 3 isoform X2
translation: MQPASAKWYDRRDYVFVEFCVEDSKDVEINFEKEKFTFSCLGGAESVKHFNEVNLYNAIDPSDSKHKRTDRSVLCYLRKGESGQAWPRLTKEKAKLNWLKVDFNNWRDWDDDPEEEDLSSFEKFSQDGSQDSDDEKMPDLE
SIO_010081: LOC109925898
subclass of: SO_0000673
so part of: LOC109925898
location: join(3750076..3750077,3758156..3758269,3762366..3762435,3762913..3763011,3763269..3763361,3765910..3765937,3766023..3766042)
location: region:3750076-3766042:1
so has part: feature:3750076-3750077:1:exon
so has part: feature:3758156-3758269:1:exon
so has part: feature:3762366-3762435:1:exon
so has part: feature:3762913-3763011:1:exon
so has part: feature:3763269-3763361:1:exon
so has part: feature:3765910-3765937:1:exon
so has part: feature:3766023-3766042:1:exon

XP_048474756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3750076-3750077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3758156-3758269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3762366-3762435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3762913-3763011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3763269-3763361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3765910-3765937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766023-3766042:1:exon

naca
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: naca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3767383..3788833
location: region:3767383-3788833:1
so has part: feature:3767383-3788833:1:exon
subclass of: SO_0000010

109926136
type: Gene
SIO_000068: ncbigene

position:3767383:1
position: 3767383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3788833:1
position: 3788833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3767383-3788833:1:exon

naca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: naca
product: nascent polypeptide associated complex subunit alpha
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618800.1
SIO_010081: naca
subclass of: SO_0000673
so part of: naca
location: join(3767383..3767446,3769235..3769306,3781713..3781798,3784378..3784455,3785035..3785181,3785516..3785644,3788383..3788505,3788710..3788833)
location: region:3767383-3788833:1
so has part: feature:3767383-3767446:1:exon
so has part: feature:3769235-3769306:1:exon
so has part: feature:3781713-3781798:1:exon
so has part: feature:3784378-3784455:1:exon
so has part: feature:3785035-3785181:1:exon
so has part: feature:3785516-3785644:1:exon
so has part: feature:3788383-3788505:1:exon
so has part: feature:3788710-3788833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3767383-3767446:1:exon

position:3767446:1
position: 3767446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3769235-3769306:1:exon

position:3769235:1
position: 3769235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769306:1
position: 3769306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3781713-3781798:1:exon

position:3781713:1
position: 3781713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3781798:1
position: 3781798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3784378-3784455:1:exon

position:3784378:1
position: 3784378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3784455:1
position: 3784455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3785035-3785181:1:exon

position:3785035:1
position: 3785035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3785181:1
position: 3785181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3785516-3785644:1:exon

position:3785516:1
position: 3785516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3785644:1
position: 3785644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3788383-3788505:1:exon

position:3788383:1
position: 3788383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3788505:1
position: 3788505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3788710-3788833:1:exon

position:3788710:1
position: 3788710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

naca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: naca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha
translation: MPGEATETVPATEQEMQQPQAETGSGTESDSDESVPELEEQDTTQSATQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGESVANIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELTM
SIO_010081: naca
subclass of: SO_0000673
so part of: naca
location: join(3769237..3769306,3781713..3781798,3784378..3784455,3785035..3785181,3785516..3785644,3788383..3788505,3788710..3788724)
location: region:3769237-3788724:1
so has part: feature:3769237-3769306:1:exon
so has part: feature:3781713-3781798:1:exon
so has part: feature:3784378-3784455:1:exon
so has part: feature:3785035-3785181:1:exon
so has part: feature:3785516-3785644:1:exon
so has part: feature:3788383-3788505:1:exon
so has part: feature:3788710-3788724:1:exon

XP_048474757.1
type: Protein
SIO_000068: ncbiprotein

position:3769237:1
position: 3769237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3788724:1
position: 3788724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3769237-3769306:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3781713-3781798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3784378-3784455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3785035-3785181:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3785516-3785644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3788383-3788505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3788710-3788724:1:exon

LOC125487397
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487397
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3771513..3780336
location: region:3771513-3780336:1
so has part: feature:3771513-3780336:1:exon
subclass of: SO_0000011

125487397
type: Gene
SIO_000068: ncbigene

position:3771513:1
position: 3771513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3780336:1
position: 3780336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3771513-3780336:1:exon

LOC125487397
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487397
product: uncharacterized LOC125487397
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007265872.1
SIO_010081: LOC125487397
subclass of: SO_0000673
so part of: LOC125487397
location: join(3771513..3772055,3775570..3775668,3778019..3778063,3780221..3780336)
location: region:3771513-3780336:1
so has part: feature:3771513-3772055:1:exon
so has part: feature:3775570-3775668:1:exon
so has part: feature:3778019-3778063:1:exon
so has part: feature:3780221-3780336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3771513-3772055:1:exon

position:3772055:1
position: 3772055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3775570-3775668:1:exon

position:3775570:1
position: 3775570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3775668:1
position: 3775668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3778019-3778063:1:exon

position:3778019:1
position: 3778019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3778063:1
position: 3778063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3780221-3780336:1:exon

position:3780221:1
position: 3780221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prim1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: prim1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3795754..3807887)
location: region:3795754-3807887:-1
so has part: feature:3795754-3807887:-1:exon
subclass of: SO_0000010

109926576
type: Gene
SIO_000068: ncbigene

position:3795754:-1
position: 3795754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3807887:-1
position: 3807887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3795754-3807887:-1:exon

prim1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: prim1
product: DNA primase subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_048618842.1
SIO_010081: prim1
subclass of: SO_0000673
so part of: prim1
location: complement(join(3795754..3795792,3796089..3796165,3800763..3800872,3801917..3801975,3802084..3802220,3803236..3803309,3804826..3804932,3806365..3806522,3807725..3807887))
location: region:3795754-3807887:-1
so has part: feature:3807725-3807887:-1:exon
so has part: feature:3806365-3806522:-1:exon
so has part: feature:3804826-3804932:-1:exon
so has part: feature:3803236-3803309:-1:exon
so has part: feature:3802084-3802220:-1:exon
so has part: feature:3801917-3801975:-1:exon
so has part: feature:3800763-3800872:-1:exon
so has part: feature:3796089-3796165:-1:exon
so has part: feature:3795754-3795792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3807725-3807887:-1:exon

position:3807725:-1
position: 3807725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3806365-3806522:-1:exon

position:3806365:-1
position: 3806365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3806522:-1
position: 3806522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3804826-3804932:-1:exon

position:3804826:-1
position: 3804826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3804932:-1
position: 3804932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3803236-3803309:-1:exon

position:3803236:-1
position: 3803236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3803309:-1
position: 3803309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3802084-3802220:-1:exon

position:3802084:-1
position: 3802084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3802220:-1
position: 3802220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3801917-3801975:-1:exon

position:3801917:-1
position: 3801917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3801975:-1
position: 3801975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3800763-3800872:-1:exon

position:3800763:-1
position: 3800763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3800872:-1
position: 3800872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3796089-3796165:-1:exon

position:3796089:-1
position: 3796089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3796165:-1
position: 3796165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3795754-3795792:-1:exon

position:3795792:-1
position: 3795792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

prim1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: prim1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA primase small subunit
translation: MVPVDNQYDAAELPDLLPIYYKRLFPYSQYFRWLSYGGVSKTYFQNREFSFTLKDDIYVRYLSFNNQNDLEKEMQKMVPYKVDIGAVYSNKPSQHNSMKSGTFHAESKELVFDIDMTDYDDVRTCCSSADICHKCWTLMTIAIKILDRALEEDFGFQHRLWVYSGRRGVHCWVCDDNARKLSQAARSAVAEYLSVVKGGTDTIKKVHLNSPIHPSIQESITVIDSYFEDYALNKQDLFGCKETWQKVLALVPDEFHEGLQMDFDKARNATERWKLLQRALTKPTVCHLDQE
SIO_010081: prim1
subclass of: SO_0000673
so part of: prim1
location: complement(join(3795754..3795792,3796089..3796165,3800763..3800872,3801917..3801975,3802084..3802220,3803236..3803309,3804826..3804932,3806365..3806522,3807725..3807839))
location: region:3795754-3807839:-1
so has part: feature:3807725-3807839:-1:exon
so has part: feature:3806365-3806522:-1:exon
so has part: feature:3804826-3804932:-1:exon
so has part: feature:3803236-3803309:-1:exon
so has part: feature:3802084-3802220:-1:exon
so has part: feature:3801917-3801975:-1:exon
so has part: feature:3800763-3800872:-1:exon
so has part: feature:3796089-3796165:-1:exon
so has part: feature:3795754-3795792:-1:exon

XP_048474799.1
type: Protein
SIO_000068: ncbiprotein

position:3807839:-1
position: 3807839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3807725-3807839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3806365-3806522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3804826-3804932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3803236-3803309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802084-3802220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3801917-3801975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3800763-3800872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3796089-3796165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3795754-3795792:-1:exon

LOC109924121
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3812076..3943579
location: region:3812076-3943579:1
so has part: feature:3812076-3943579:1:exon
subclass of: SO_0000010

109924121
type: Gene
SIO_000068: ncbigene

position:3812076:1
position: 3812076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3943579:1
position: 3943579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3812076-3943579:1:exon

LOC109924121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924121
product: bromodomain adjacent to zinc finger domain protein 2A-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_048618801.1
SIO_010081: LOC109924121
subclass of: SO_0000673
so part of: LOC109924121
location: join(3812076..3812664,3878365..3878571,3880390..3880599,3883501..3883755,3888613..3888673,3894556..3894664,3897815..3897916,3898441..3898651,3902782..3902843,3905153..3905326,3906344..3906598,3909600..3909814,3910342..3910416,3911786..3911978,3912630..3912692,3914452..3914596,3915237..3915859,3919669..3919885,3924800..3924955,3925740..3925897,3927304..3927593,3928001..3928136,3935693..3935839,3936738..3936966,3937638..3937781,3939398..3943579)
location: region:3812076-3943579:1
so has part: feature:3812076-3812664:1:exon
so has part: feature:3878365-3878571:1:exon
so has part: feature:3880390-3880599:1:exon
so has part: feature:3883501-3883755:1:exon
so has part: feature:3888613-3888673:1:exon
so has part: feature:3894556-3894664:1:exon
so has part: feature:3897815-3897916:1:exon
so has part: feature:3898441-3898651:1:exon
so has part: feature:3902782-3902843:1:exon
so has part: feature:3905153-3905326:1:exon
so has part: feature:3906344-3906598:1:exon
so has part: feature:3909600-3909814:1:exon
so has part: feature:3910342-3910416:1:exon
so has part: feature:3911786-3911978:1:exon
so has part: feature:3912630-3912692:1:exon
so has part: feature:3914452-3914596:1:exon
so has part: feature:3915237-3915859:1:exon
so has part: feature:3919669-3919885:1:exon
so has part: feature:3924800-3924955:1:exon
so has part: feature:3925740-3925897:1:exon
so has part: feature:3927304-3927593:1:exon
so has part: feature:3928001-3928136:1:exon
so has part: feature:3935693-3935839:1:exon
so has part: feature:3936738-3936966:1:exon
so has part: feature:3937638-3937781:1:exon
so has part: feature:3939398-3943579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3812076-3812664:1:exon

position:3812664:1
position: 3812664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3878365-3878571:1:exon

position:3878365:1
position: 3878365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3878571:1
position: 3878571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3880390-3880599:1:exon

position:3880390:1
position: 3880390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3880599:1
position: 3880599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3883501-3883755:1:exon

position:3883501:1
position: 3883501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3883755:1
position: 3883755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3888613-3888673:1:exon

position:3888613:1
position: 3888613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3888673:1
position: 3888673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3894556-3894664:1:exon

position:3894556:1
position: 3894556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3894664:1
position: 3894664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3897815-3897916:1:exon

position:3897815:1
position: 3897815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3897916:1
position: 3897916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3898441-3898651:1:exon

position:3898441:1
position: 3898441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3898651:1
position: 3898651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3902782-3902843:1:exon

position:3902782:1
position: 3902782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3902843:1
position: 3902843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3905153-3905326:1:exon

position:3905153:1
position: 3905153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3905326:1
position: 3905326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3906344-3906598:1:exon

position:3906344:1
position: 3906344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3906598:1
position: 3906598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3909600-3909814:1:exon

position:3909600:1
position: 3909600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3909814:1
position: 3909814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3910342-3910416:1:exon

position:3910342:1
position: 3910342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3910416:1
position: 3910416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3911786-3911978:1:exon

position:3911786:1
position: 3911786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3911978:1
position: 3911978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3912630-3912692:1:exon

position:3912630:1
position: 3912630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3912692:1
position: 3912692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3914452-3914596:1:exon

position:3914452:1
position: 3914452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3914596:1
position: 3914596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3915237-3915859:1:exon

position:3915237:1
position: 3915237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3915859:1
position: 3915859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3919669-3919885:1:exon

position:3919669:1
position: 3919669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3919885:1
position: 3919885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3924800-3924955:1:exon

position:3924800:1
position: 3924800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3924955:1
position: 3924955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3925740-3925897:1:exon

position:3925740:1
position: 3925740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3925897:1
position: 3925897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3927304-3927593:1:exon

position:3927304:1
position: 3927304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3927593:1
position: 3927593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3928001-3928136:1:exon

position:3928001:1
position: 3928001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3928136:1
position: 3928136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3935693-3935839:1:exon

position:3935693:1
position: 3935693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3935839:1
position: 3935839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3936738-3936966:1:exon

position:3936738:1
position: 3936738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3936966:1
position: 3936966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3937638-3937781:1:exon

position:3937638:1
position: 3937638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3937781:1
position: 3937781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3939398-3943579:1:exon

position:3939398:1
position: 3939398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924121
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger domain protein 2A-like
translation: MNGELNVNGVSVDSGASTSEAFAPAASSLVMRDSHPNSMSGYDFFWDCGQYQSTSVDKLKEKVMLTQLPSQGQHQSNGPFETAIKEVPTEPSAMPKSLKLCDDRTHNSTGLHFDPYSLCSTQKIHFDMVQEPSSFSPNHELTRTVSEEVHSFTYPYDHQYEHCNSQPDIVDLEDADLDLFCSKDYEEVVELEDKESESRRSSDCIESKMEEPKLPANQDISINPLFDCDGDHSLENSITFNIPLKEFTHDPASVVVMPYTSSYFMELSGESDNELNDCHDAEVKMSLKQDVSTFSLSDSTLAPSLESLNVFKSSFNETQTSGSLLMTPRTSSPRKDLTASDSETDECEDPDAAAVKILSKLVMSSLTLSDAEADGHGAPDGNSTHSLESSTVFKTPAKKEKKKHSVPMTPLTPSSSATSKGECIRRRVTDERELRIPLQYGWRREIRIRTVGSRLHGETTYYAPCGKRLRQFPEVIKYLVRNAVTEVNREHFSFSPRMNVGDFFEARESSEGEQWCKLNAEEIPLRIKAMMGRRGRPPNPNKQRAQKSPKVKRGKGRPPKVKTVTLLNKSEFKLMKRIESQAVLNEKEKQKLKALLNKLKQKGQTQLKPEQKLQKAQRVTKDQKDKQVKKQQKLKGKQQKLQLWQEMKKPTEDLYLTDHKPLPEFVPIPGLVLSGRAFSDCLIVIEFLHNYGKVLGFDTSKDVPSLNTLQEGLLNVGDNMADIQDLLIRLLQIAVLDPGLPHKYQSVTFLGERICDIGINRDNVSEVLRIFLEAYGAEAELCEGLKSKSFQAHCSEKKAAVLAFLVNELLGSSIVIREIDKNIDHRANIRKNKWIVDGKLRRLKRALAKKKGIWQPDSTVDSRRRKQGLCSEEGHNSIAAGMRSEESAKEETKDKSSERKTDGTIKMDDHPSASVAELNRQIEKLSKRQSFFARKLLQVSQTLRALLLGQDRFRRRYWVFPHLCGVFVEGSEGSLGTEELEAEKNQCKLLESALVKVEASEIPDKNPTTLGQPVDNRQGTCDAELVNPENPKLQDAAYAKHSSDAIQNSHSSSHTPQNIDQSGVFLAWLSILQNSVSNLSLPTPHCSSNKDSPSAISPEVLLASNRKLFDLSIPNSEQSVKECAEKHGQWFSLLPRTPCDSSSITHLPSSSQQNQSQRLDSDPCQLNHDGLKLLTSPEFATSQSADSMDPTTPCKTPIAASFEVGPTATKAKVKSHHCDGAPQNVCFLPRIPRRRGRPSKLQKEMNQRQLKPIPEEMQKGWWHIDNLEQLNCLLKALHPRGLREKALQKQLLKHMDYVSQACMREKKDSIFNNNDQEHSVTKEMVEKWKPEKWAFPVDLAALRYLEALEQRVISASLQVKGWTSPDTDSTRDDLVYFDQQWLTSGDGKMKDEEEMELMRRNNNPLDLAVTRLATLELNVERRYLKEPLCPPVSGKLESAGTVSSASAEGVNDAKQYSNEGHISPGLSVWRETLLKCTNAAQVFMCIQQLEKAIAWEKSIMKVSCQICGKGDKDEFLLLCDNCDQGCHTYCLKPKIVGIAGVDWFCPMCTTAASNQSVRSGAPQRKTKKRRARXHFKNKTNDFEYFDPHCPRKYMKKRRRKCSLRGGSPAAKRKKISNRDQSSDLMLCEVILMEMEAHEDAWPFLHPVNPRLVPGYRKIIKRPMDFSTIRRKLISGKYLSCEEFAEDTTLVFDNCMTFNEDDSEVGRAGHTMRKFFESRWAEFYHSS
SIO_010081: LOC109924121
subclass of: SO_0000673
so part of: LOC109924121
location: join(3812076..3812664,3878365..3878571,3880390..3880599,3883501..3883755,3888613..3888673,3894556..3894664,3897815..3897916,3898441..3898651,3902782..3902843,3905153..3905326,3906344..3906598,3909600..3909814,3910342..3910416,3911786..3911978,3912630..3912692,3914452..3914596,3915237..3915859,3919669..3919885,3924800..3924955,3925740..3925897,3927304..3927593,3928001..3928136,3935693..3935839,3936738..3936966,3937638..3937781,3939398..3939551)
location: region:3812076-3939551:1
so has part: feature:3812076-3812664:1:exon
so has part: feature:3878365-3878571:1:exon
so has part: feature:3880390-3880599:1:exon
so has part: feature:3883501-3883755:1:exon
so has part: feature:3888613-3888673:1:exon
so has part: feature:3894556-3894664:1:exon
so has part: feature:3897815-3897916:1:exon
so has part: feature:3898441-3898651:1:exon
so has part: feature:3902782-3902843:1:exon
so has part: feature:3905153-3905326:1:exon
so has part: feature:3906344-3906598:1:exon
so has part: feature:3909600-3909814:1:exon
so has part: feature:3910342-3910416:1:exon
so has part: feature:3911786-3911978:1:exon
so has part: feature:3912630-3912692:1:exon
so has part: feature:3914452-3914596:1:exon
so has part: feature:3915237-3915859:1:exon
so has part: feature:3919669-3919885:1:exon
so has part: feature:3924800-3924955:1:exon
so has part: feature:3925740-3925897:1:exon
so has part: feature:3927304-3927593:1:exon
so has part: feature:3928001-3928136:1:exon
so has part: feature:3935693-3935839:1:exon
so has part: feature:3936738-3936966:1:exon
so has part: feature:3937638-3937781:1:exon
so has part: feature:3939398-3939551:1:exon

XP_048474758.1
type: Protein
SIO_000068: ncbiprotein

position:3939551:1
position: 3939551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3812076-3812664:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3878365-3878571:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3880390-3880599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3883501-3883755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3888613-3888673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3894556-3894664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3897815-3897916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3898441-3898651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3902782-3902843:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3905153-3905326:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3906344-3906598:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3909600-3909814:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3910342-3910416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3911786-3911978:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3912630-3912692:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3914452-3914596:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3915237-3915859:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3919669-3919885:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3924800-3924955:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3925740-3925897:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3927304-3927593:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3928001-3928136:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3935693-3935839:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3936738-3936966:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3937638-3937781:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3939398-3939551:1:exon

LOC109924123
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3946440..3953101
location: region:3946440-3953101:1
so has part: feature:3946440-3953101:1:exon
subclass of: SO_0000010

109924123
type: Gene
SIO_000068: ncbigene

position:3946440:1
position: 3946440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3953101:1
position: 3953101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3946440-3953101:1:exon

LOC109924123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924123
product: cytochrome c oxidase assembly protein COX14 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020524139.2
SIO_010081: LOC109924123
subclass of: SO_0000673
so part of: LOC109924123
location: join(3946440..3946672,3952317..3953101)
location: region:3946440-3953101:1
so has part: feature:3946440-3946672:1:exon
so has part: feature:3952317-3953101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3946440-3946672:1:exon

position:3946672:1
position: 3946672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3952317-3953101:1:exon

position:3952317:1
position: 3952317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly protein COX14 homolog
translation: MVSSRRLADVGYRMFSGSMILLTIYGGYLCSARAYRYFQRQKALKAAAEDQVNRMMKD
SIO_010081: LOC109924123
subclass of: SO_0000673
so part of: LOC109924123
location: 3952327..3952503
location: region:3952327-3952503:1
so has part: feature:3952327-3952503:1:exon

XP_020379728.1
type: Protein
SIO_000068: ncbiprotein

position:3952327:1
position: 3952327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3952503:1
position: 3952503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3952327-3952503:1:exon

LOC109926281
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3954663..4016381)
location: region:3954663-4016381:-1
so has part: feature:3954663-4016381:-1:exon
subclass of: SO_0000010

109926281
type: Gene
SIO_000068: ncbigene

position:3954663:-1
position: 3954663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4016381:-1
position: 4016381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3954663-4016381:-1:exon

LOC109926281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926281
product: ceramide synthase 6-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618802.1
SIO_010081: LOC109926281
subclass of: SO_0000673
so part of: LOC109926281
location: complement(join(3954663..3960649,3963998..3964154,3974253..3974359,3976383..3976511,3984257..3984349,3984896..3984946,3985758..3985925,3993395..3993500,4016126..4016381))
location: region:3954663-4016381:-1
so has part: feature:4016126-4016381:-1:exon
so has part: feature:3993395-3993500:-1:exon
so has part: feature:3985758-3985925:-1:exon
so has part: feature:3984896-3984946:-1:exon
so has part: feature:3984257-3984349:-1:exon
so has part: feature:3976383-3976511:-1:exon
so has part: feature:3974253-3974359:-1:exon
so has part: feature:3963998-3964154:-1:exon
so has part: feature:3954663-3960649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4016126-4016381:-1:exon

position:4016126:-1
position: 4016126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3993395-3993500:-1:exon

position:3993395:-1
position: 3993395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3993500:-1
position: 3993500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3985758-3985925:-1:exon

position:3985758:-1
position: 3985758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3985925:-1
position: 3985925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3984896-3984946:-1:exon

position:3984896:-1
position: 3984896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3984946:-1
position: 3984946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3984257-3984349:-1:exon

position:3984257:-1
position: 3984257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3984349:-1
position: 3984349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3976383-3976511:-1:exon

position:3976383:-1
position: 3976383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3976511:-1
position: 3976511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3974253-3974359:-1:exon

position:3974253:-1
position: 3974253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3974359:-1
position: 3974359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3963998-3964154:-1:exon

position:3963998:-1
position: 3963998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3964154:-1
position: 3964154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3954663-3960649:-1:exon

position:3960649:-1
position: 3960649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109926281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 6-like
translation: MAGFSAWFWNERFWLPHNVTWADLKNTDDAEYPQAGDLLFAFPLAFGIFLVRLAFERFIAKPCALSLRIQANGPRRAQPNAILEKVFTSITKSPDEKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPSTLTKFCESMYAFFSFPPPPSPAPWFWDTRHCWYNYPYQQLVFDMYYYYIMELSFYWSLMFSQFTDIKRKDFLIMFLHHLATVGLITFSYSNNMVRVGTLVMCLHDASDFFLEAAKLANYAKYQRLCDSLFVIFGFVFVSSRLGIYPFWILNTTLFESWEIIGPYPSWWFFNLLLLILQVLHGIWSYLIIRIAYKAIVKGKVSKDDRSDIESSSDDDDSMTNGTRPHHHNPSKGANSTNGTNGHLTTGAWAGDH
SIO_010081: LOC109926281
subclass of: SO_0000673
so part of: LOC109926281
location: complement(join(3960488..3960649,3963998..3964154,3974253..3974359,3976383..3976511,3984257..3984349,3984896..3984946,3985758..3985925,3993395..3993500,4016126..4016295))
location: region:3960488-4016295:-1
so has part: feature:4016126-4016295:-1:exon
so has part: feature:3993395-3993500:-1:exon
so has part: feature:3985758-3985925:-1:exon
so has part: feature:3984896-3984946:-1:exon
so has part: feature:3984257-3984349:-1:exon
so has part: feature:3976383-3976511:-1:exon
so has part: feature:3974253-3974359:-1:exon
so has part: feature:3963998-3964154:-1:exon
so has part: feature:3960488-3960649:-1:exon

XP_048474759.1
type: Protein
SIO_000068: ncbiprotein

position:3960488:-1
position: 3960488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4016295:-1
position: 4016295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4016126-4016295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3993395-3993500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3985758-3985925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3984896-3984946:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3984257-3984349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3976383-3976511:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3974253-3974359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3963998-3964154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3960488-3960649:-1:exon

LOC125487414
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4046201..4049762)
location: region:4046201-4049762:-1
so has part: feature:4046201-4049762:-1:exon
subclass of: SO_0000010

125487414
type: Gene
SIO_000068: ncbigene

position:4046201:-1
position: 4046201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049762:-1
position: 4049762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4046201-4049762:-1:exon

LOC125487414
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487414
product: sonic hedgehog protein A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618843.1
SIO_010081: LOC125487414
subclass of: SO_0000673
so part of: LOC125487414
location: complement(join(4046201..4047116,4047869..4047885,4049741..4049762))
location: region:4046201-4049762:-1
so has part: feature:4049741-4049762:-1:exon
so has part: feature:4047869-4047885:-1:exon
so has part: feature:4046201-4047116:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4049741-4049762:-1:exon

position:4049741:-1
position: 4049741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4047869-4047885:-1:exon

position:4047869:-1
position: 4047869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4047885:-1
position: 4047885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4046201-4047116:-1:exon

position:4047116:-1
position: 4047116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487414
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sonic hedgehog protein A-like
translation: MFLHNYDVHCSLKSDNSLATKTGGCFPSKAMVTLENGKTRAVSELNPGDRVLTVNAAGQVVPSQVLLFLDKEEQLRISFTVLETEDSRLWMELTAAHLIFVSDNNTDRMENFRPIFASRVRTGQFVLVREIGSGQLRSSRIKAIYVEEYIGAYAPLTSHGTLLVNNVLASCYAMIEKHHWAHLAFAPLRLFHSLTSLLPVLHPRHCNATQENGIHWYSKFLYNLGEKVLDREMFHSL
SIO_010081: LOC125487414
subclass of: SO_0000673
so part of: LOC125487414
location: complement(join(4046442..4047116,4047869..4047885,4049741..4049762))
location: region:4046442-4049762:-1
so has part: feature:4049741-4049762:-1:exon
so has part: feature:4047869-4047885:-1:exon
so has part: feature:4046442-4047116:-1:exon

XP_048474800.1
type: Protein
SIO_000068: ncbiprotein

position:4046442:-1
position: 4046442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049741-4049762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4047869-4047885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4046442-4047116:-1:exon

LOC109926101
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4062789..4117761
location: region:4062789-4117761:1
so has part: feature:4062789-4117761:1:exon
subclass of: SO_0000010

109926101
type: Gene
SIO_000068: ncbigene

position:4062789:1
position: 4062789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4117761:1
position: 4117761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4062789-4117761:1:exon

LOC109926101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926101
product: STE20/SPS1-related proline-alanine-rich protein kinase-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618844.1
SIO_010081: LOC109926101
subclass of: SO_0000673
so part of: LOC109926101
location: join(4062789..4062828,4064995..4065107,4065979..4066087,4066316..4066457,4072433..4072550,4112678..4112745,4113267..4113319,4114163..4114231,4114735..4114799,4117516..4117761)
location: region:4062789-4117761:1
so has part: feature:4062789-4062828:1:exon
so has part: feature:4064995-4065107:1:exon
so has part: feature:4065979-4066087:1:exon
so has part: feature:4066316-4066457:1:exon
so has part: feature:4072433-4072550:1:exon
so has part: feature:4112678-4112745:1:exon
so has part: feature:4113267-4113319:1:exon
so has part: feature:4114163-4114231:1:exon
so has part: feature:4114735-4114799:1:exon
so has part: feature:4117516-4117761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4062789-4062828:1:exon

position:4062828:1
position: 4062828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4064995-4065107:1:exon

position:4064995:1
position: 4064995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4065107:1
position: 4065107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4065979-4066087:1:exon

position:4065979:1
position: 4065979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4066087:1
position: 4066087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4066316-4066457:1:exon

position:4066316:1
position: 4066316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4066457:1
position: 4066457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4072433-4072550:1:exon

position:4072433:1
position: 4072433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4072550:1
position: 4072550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4112678-4112745:1:exon

position:4112678:1
position: 4112678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4112745:1
position: 4112745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4113267-4113319:1:exon

position:4113267:1
position: 4113267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4113319:1
position: 4113319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4114163-4114231:1:exon

position:4114163:1
position: 4114163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4114231:1
position: 4114231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4114735-4114799:1:exon

position:4114735:1
position: 4114735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4114799:1
position: 4114799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4117516-4117761:1:exon

position:4117516:1
position: 4117516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: STE20/SPS1-related proline-alanine-rich protein kinase-like
translation: MLIVKLHVKNGQLGSGATAVVQAALCKPKKERVAIKRINLEKCNTSMDELLKEIQAMSQCNHPNVVTYFTSFVVKDELWLVMKLLSGGSMLDIIRRTISNNEHKNGVLDEPVIATVLKEVLEGLDYLHRNGQIHRDALADQYNQEPLFRGYVRALLSQEKKHGVGTGTRCLLGKEQSESPSHLSNEDSSVHLVLRLRNLRRELNDIRFEFTPGRDSAVGVSQELVSAGLVDEFDMMVVANNLQRLIDDPHSNRTLTFRLVSGCEGYSPDETKLIGFAQLSVR
SIO_010081: LOC109926101
subclass of: SO_0000673
so part of: LOC109926101
location: join(4062789..4062828,4064995..4065107,4065979..4066087,4066316..4066457,4072433..4072550,4112678..4112745,4113267..4113319,4114163..4114231,4114735..4114799,4117516..4117587)
location: region:4062789-4117587:1
so has part: feature:4062789-4062828:1:exon
so has part: feature:4064995-4065107:1:exon
so has part: feature:4065979-4066087:1:exon
so has part: feature:4066316-4066457:1:exon
so has part: feature:4072433-4072550:1:exon
so has part: feature:4112678-4112745:1:exon
so has part: feature:4113267-4113319:1:exon
so has part: feature:4114163-4114231:1:exon
so has part: feature:4114735-4114799:1:exon
so has part: feature:4117516-4117587:1:exon

XP_048474801.1
type: Protein
SIO_000068: ncbiprotein

position:4117587:1
position: 4117587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4062789-4062828:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4064995-4065107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4065979-4066087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4066316-4066457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4072433-4072550:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4112678-4112745:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4113267-4113319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4114163-4114231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4114735-4114799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4117516-4117587:1:exon

LOC109923569
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4131140..4265961)
location: region:4131140-4265961:-1
so has part: feature:4131140-4265961:-1:exon
subclass of: SO_0000010

109923569
type: Gene
SIO_000068: ncbigene

position:4131140:-1
position: 4131140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4265961:-1
position: 4265961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4131140-4265961:-1:exon

LOC109923569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923569
product: LIM domain and actin-binding protein 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618805.1
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4131140..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203621,4223137..4223619,4232466..4232511,4237440..4237575,4265511..4265546,4265873..4265961))
location: region:4131140-4265961:-1
so has part: feature:4265873-4265961:-1:exon
so has part: feature:4265511-4265546:-1:exon
so has part: feature:4237440-4237575:-1:exon
so has part: feature:4232466-4232511:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203621:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4131140-4133914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4265873-4265961:-1:exon

position:4265873:-1
position: 4265873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4265511-4265546:-1:exon

position:4265511:-1
position: 4265511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4265546:-1
position: 4265546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4237440-4237575:-1:exon

position:4237440:-1
position: 4237440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4237575:-1
position: 4237575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4232466-4232511:-1:exon

position:4232466:-1
position: 4232466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4232511:-1
position: 4232511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4223137-4223619:-1:exon

position:4223137:-1
position: 4223137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4223619:-1
position: 4223619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4203498-4203621:-1:exon

position:4203498:-1
position: 4203498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4203621:-1
position: 4203621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4148064-4148215:-1:exon

position:4148064:-1
position: 4148064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4148215:-1
position: 4148215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4142695-4142787:-1:exon

position:4142695:-1
position: 4142695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4142787:-1
position: 4142787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4141614-4141727:-1:exon

position:4141614:-1
position: 4141614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4141727:-1
position: 4141727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4139236-4139302:-1:exon

position:4139236:-1
position: 4139236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4139302:-1
position: 4139302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4138786-4138889:-1:exon

position:4138786:-1
position: 4138786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4138889:-1
position: 4138889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4134915-4135048:-1:exon

position:4134915:-1
position: 4134915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4135048:-1
position: 4135048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4131140-4133914:-1:exon

position:4133914:-1
position: 4133914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109923569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923569
product: LIM domain and actin-binding protein 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618807.1
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4131140..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203618,4223137..4223619,4232466..4232511,4237440..4237575,4265511..4265546,4265766..4265899))
location: region:4131140-4265899:-1
so has part: feature:4265766-4265899:-1:exon
so has part: feature:4265511-4265546:-1:exon
so has part: feature:4237440-4237575:-1:exon
so has part: feature:4232466-4232511:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203618:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4131140-4133914:-1:exon

position:4265899:-1
position: 4265899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4265766-4265899:-1:exon

position:4265766:-1
position: 4265766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4265511-4265546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4237440-4237575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4232466-4232511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4223137-4223619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4203498-4203618:-1:exon

position:4203618:-1
position: 4203618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4148064-4148215:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4142695-4142787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4141614-4141727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4139236-4139302:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4138786-4138889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4134915-4135048:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4131140-4133914:-1:exon

LOC109923569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923569
product: LIM domain and actin-binding protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618804.1
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4131140..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203621,4223137..4223619,4232466..4232511,4237440..4237575,4265511..4265546,4265766..4265899))
location: region:4131140-4265899:-1
so has part: feature:4265766-4265899:-1:exon
so has part: feature:4265511-4265546:-1:exon
so has part: feature:4237440-4237575:-1:exon
so has part: feature:4232466-4232511:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203621:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4131140-4133914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4265766-4265899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4265511-4265546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4237440-4237575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4232466-4232511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4223137-4223619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4203498-4203621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4148064-4148215:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4142695-4142787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4141614-4141727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4139236-4139302:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4138786-4138889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4134915-4135048:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4131140-4133914:-1:exon

LOC109923569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923569
product: LIM domain and actin-binding protein 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618806.1
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4131140..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203621,4223137..4223619,4232466..4232511,4237440..4237575,4265252..4265270))
location: region:4131140-4265270:-1
so has part: feature:4265252-4265270:-1:exon
so has part: feature:4237440-4237575:-1:exon
so has part: feature:4232466-4232511:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203621:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4131140-4133914:-1:exon

position:4265270:-1
position: 4265270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4265252-4265270:-1:exon

position:4265252:-1
position: 4265252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4237440-4237575:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4232466-4232511:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4223137-4223619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4203498-4203621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4148064-4148215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4142695-4142787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4141614-4141727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4139236-4139302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4138786-4138889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4134915-4135048:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4131140-4133914:-1:exon

LOC109923569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923569
product: LIM domain and actin-binding protein 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618808.1
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4131140..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203621,4223137..4223619,4229911..4230085))
location: region:4131140-4230085:-1
so has part: feature:4229911-4230085:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203621:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4131140-4133914:-1:exon

position:4230085:-1
position: 4230085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4229911-4230085:-1:exon

position:4229911:-1
position: 4229911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4223137-4223619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4203498-4203621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4148064-4148215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4142695-4142787:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4141614-4141727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4139236-4139302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4138786-4138889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4134915-4135048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4131140-4133914:-1:exon

LOC109923569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MERSPFTRGQWASQSLRITAKELSIVNKRGTAALRERFSKYQKAAEEASSERKKGNTENLPPTLRKGTLSILKKKWEIPENSTAQPVLPKSPVRINRADSRAQIAAVSPKAYSSFVPLSESDQNLETTPRVKSPRSPGVLSRFPYPGTESEGQAELKMERILSKEGNEVENGTAQDLTVSSKIEKFNVPLNSLKMMFEKGDAHVQPKHRHHESPVKATRDPLKSDVSKKWLDKTAEGSCLIEDIERKAREGNSSGFDHTSSGTSPDKTESKVGTELADMQEQTSVKDRMALYQATASQKETSIQSPTTLDEHMLSGEVINTKELWGSREASNPKKLPQSDISTSDIEMNAGNRNEQKENVPPVPLTSTPPHAELQKGSVVETSNAWKNSTYEKPGNSQVNVENEEGTPKLSTQGIKQQRSTAEIQSSPAKSVKKFQLPARELCVTCQKTVYPMERLVANQQVFHNFCFRCSHCNTKLSIGNFASLHGNVYCKPHFSQLFKSKGNYDEGFGHKPHKELWMAKTESDTTERKNEVAMDKSETKTENSGVDELSILKVGVLAASMEALVTSTPPEKVEKPVETRKLKIAWPPPNEAGSKGIGSSEESLRVNKPKWPPEDDFQHLTKRNSEFIGTSRLRRSASLKERCRPFTIAAPLRPIAIKEPGRNPSAKNTTQDLIIKEREAKRETDERKNENESTLENEHEQPVTTELEGTQEDLVTEKVVEVKSNKKLLQDEDVEELHLHKEEAREPDFLECEEQESKQKMVESQTSGETRTSNEHIPENERKLEDIGFWDGDETEVEGTAELSVEEQIKRNRCYEDED
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4132885..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203618,4223137..4223619,4232466..4232511,4237440..4237558))
location: region:4132885-4237558:-1
so has part: feature:4237440-4237558:-1:exon
so has part: feature:4232466-4232511:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203618:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4132885-4133914:-1:exon

XP_048474764.1
type: Protein
SIO_000068: ncbiprotein

position:4132885:-1
position: 4132885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4237558:-1
position: 4237558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4237440-4237558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4232466-4232511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4223137-4223619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4203498-4203618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4148064-4148215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4142695-4142787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4141614-4141727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4139236-4139302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4138786-4138889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4134915-4135048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4132885-4133914:-1:exon

LOC109923569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MERSPFTRGQWASQSLRITAKELSIVNKRGTAALRERFSKYQKAAEEASSERKKGNTENLPPTLRKGTLSILKKKWEIPENSTAQPVLPKSPVRINRADSRAQIAAVSPKAYSSFVPLSESDQNLETTPRVKSPRSPGVLSRFPYPGTESEGQAELKMERILSKEGNEVENGTAQDLTVSSKIEKFNVPLNSLKMMFEKGDAHVQPKHRHHESPVKQATRDPLKSDVSKKWLDKTAEGSCLIEDIERKAREGNSSGFDHTSSGTSPDKTESKVGTELADMQEQTSVKDRMALYQATASQKETSIQSPTTLDEHMLSGEVINTKELWGSREASNPKKLPQSDISTSDIEMNAGNRNEQKENVPPVPLTSTPPHAELQKGSVVETSNAWKNSTYEKPGNSQVNVENEEGTPKLSTQGIKQQRSTAEIQSSPAKSVKKFQLPARELCVTCQKTVYPMERLVANQQVFHNFCFRCSHCNTKLSIGNFASLHGNVYCKPHFSQLFKSKGNYDEGFGHKPHKELWMAKTESDTTERKNEVAMDKSETKTENSGVDELSILKVGVLAASMEALVTSTPPEKVEKPVETRKLKIAWPPPNEAGSKGIGSSEESLRVNKPKWPPEDDFQHLTKRNSEFIGTSRLRRSASLKERCRPFTIAAPLRPIAIKEPGRNPSAKNTTQDLIIKEREAKRETDERKNENESTLENEHEQPVTTELEGTQEDLVTEKVVEVKSNKKLLQDEDVEELHLHKEEAREPDFLECEEQESKQKMVESQTSGETRTSNEHIPENERKLEDIGFWDGDETEVEGTAELSVEEQIKRNRCYEDED
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4132885..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203621,4223137..4223619,4232466..4232511,4237440..4237558))
location: region:4132885-4237558:-1
so has part: feature:4237440-4237558:-1:exon
so has part: feature:4232466-4232511:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203621:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4132885-4133914:-1:exon

XP_048474761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4237440-4237558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4232466-4232511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4223137-4223619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4203498-4203621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4148064-4148215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4142695-4142787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4141614-4141727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4139236-4139302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4138786-4138889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4134915-4135048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4132885-4133914:-1:exon

LOC109923569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MERSPFTRGQWASQSLRITAKELSIVNKRGTAALRERFSKYQKAAEEASSERKKGNTENLPPTLRKGTLSILKKKWEIPENSTAQPVLPKSPVRINRADSRAQIAAVSPKAYSSFVPLSESDQNLETTPRVKSPRSPGVLSRFPYPGTESEGQAELKMERILSKEGNEVENGTAQDLTVSSKIEKFNVPLNSLKMMFEKGDAHVQPKHRHHESPVKQATRDPLKSDVSKKWLDKTAEGSCLIEDIERKAREGNSSGFDHTSSGTSPDKTESKVGTELADMQEQTSVKDRMALYQATASQKETSIQSPTTLDEHMLSGEVINTKELWGSREASNPKKLPQSDISTSDIEMNAGNRNEQKENVPPVPLTSTPPHAELQKGSVVETSNAWKNSTYEKPGNSQVNVENEEGTPKLSTQGIKQQRSTAEIQSSPAKSVKKFQLPARELCVTCQKTVYPMERLVANQQVFHNFCFRCSHCNTKLSIGNFASLHGNVYCKPHFSQLFKSKGNYDEGFGHKPHKELWMAKTESDTTERKNEVAMDKSETKTENSGVDELSILKVGVLAASMEALVTSTPPEKVEKPVETRKLKIAWPPPNEAGSKGIGSSEESLRVNKPKWPPEDDFQHLTKRNSEFIGTSRLRRSASLKERCRPFTIAAPLRPIAIKEPGRNPSAKNTTQDLIIKEREAKRETDERKNENESTLENEHEQPVTTELEGTQEDLVTEKVVEVKSNKKLLQDEDVEELHLHKEEAREPDFLECEEQESKQKMVESQTSGETRTSNEHIPENERKLEDIGFWDGDETEVEGTAELSVEEQIKRNRCYEDED
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4132885..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203621,4223137..4223619,4232466..4232511,4237440..4237558))
location: region:4132885-4237558:-1
so has part: feature:4237440-4237558:-1:exon
so has part: feature:4232466-4232511:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203621:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4132885-4133914:-1:exon

XP_048474762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4237440-4237558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4232466-4232511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4223137-4223619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4203498-4203621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4148064-4148215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4142695-4142787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4141614-4141727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4139236-4139302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4138786-4138889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4134915-4135048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4132885-4133914:-1:exon

LOC109923569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MERSPFTRGQWASQSLRITAKELSIVNKRGTAALRERFSKYQKAAEEASSERKKGNTENLPPTLRKGTLSILKKKWEIPENSTAQPVLPKSPVRINRADSRAQIAAVSPKAYSSFVPLSESDQNLETTPRVKSPRSPGVLSRFPYPGTESEGQAELKMERILSKEGNEVENGTAQDLTVSSKIEKFNVPLNSLKMMFEKGDAHVQPKHRHHESPVKQATRDPLKSDVSKKWLDKTAEGSCLIEDIERKAREGNSSGFDHTSSGTSPDKTESKVGTELADMQEQTSVKDRMALYQATASQKETSIQSPTTLDEHMLSGEVINTKELWGSREASNPKKLPQSDISTSDIEMNAGNRNEQKENVPPVPLTSTPPHAELQKGSVVETSNAWKNSTYEKPGNSQVNVENEEGTPKLSTQGIKQQRSTAEIQSSPAKSVKKFQLPARELCVTCQKTVYPMERLVANQQVFHNFCFRCSHCNTKLSIGNFASLHGNVYCKPHFSQLFKSKGNYDEGFGHKPHKELWMAKTESDTTERKNEVAMDKSETKTENSGVDELSILKVGVLAASMEALVTSTPPEKVEKPVETRKLKIAWPPPNEAGSKGIGSSEESLRVNKPKWPPEDDFQHLTKRNSEFIGTSRLRRSASLKERCRPFTIAAPLRPIAIKEPGRNPSAKNTTQDLIIKEREAKRETDERKNENESTLENEHEQPVTTELEGTQEDLVTEKVVEVKSNKKLLQDEDVEELHLHKEEAREPDFLECEEQESKQKMVESQTSGETRTSNEHIPENERKLEDIGFWDGDETEVEGTAELSVEEQIKRNRCYEDED
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4132885..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203621,4223137..4223619,4232466..4232511,4237440..4237558))
location: region:4132885-4237558:-1
so has part: feature:4237440-4237558:-1:exon
so has part: feature:4232466-4232511:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203621:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4132885-4133914:-1:exon

XP_048474763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4237440-4237558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4232466-4232511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4223137-4223619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4203498-4203621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4148064-4148215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4142695-4142787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4141614-4141727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4139236-4139302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4138786-4138889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4134915-4135048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4132885-4133914:-1:exon

LOC109923569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X3
translation: MNTENLPPTLRKGTLSILKKKWEIPENSTAQPVLPKSPVRINRADSRAQIAAVSPKAYSSFVPLSESDQNLETTPRVKSPRSPGVLSRFPYPGTESEGQAELKMERILSKEGNEVENGTAQDLTVSSKIEKFNVPLNSLKMMFEKGDAHVQPKHRHHESPVKQATRDPLKSDVSKKWLDKTAEGSCLIEDIERKAREGNSSGFDHTSSGTSPDKTESKVGTELADMQEQTSVKDRMALYQATASQKETSIQSPTTLDEHMLSGEVINTKELWGSREASNPKKLPQSDISTSDIEMNAGNRNEQKENVPPVPLTSTPPHAELQKGSVVETSNAWKNSTYEKPGNSQVNVENEEGTPKLSTQGIKQQRSTAEIQSSPAKSVKKFQLPARELCVTCQKTVYPMERLVANQQVFHNFCFRCSHCNTKLSIGNFASLHGNVYCKPHFSQLFKSKGNYDEGFGHKPHKELWMAKTESDTTERKNEVAMDKSETKTENSGVDELSILKVGVLAASMEALVTSTPPEKVEKPVETRKLKIAWPPPNEAGSKGIGSSEESLRVNKPKWPPEDDFQHLTKRNSEFIGTSRLRRSASLKERCRPFTIAAPLRPIAIKEPGRNPSAKNTTQDLIIKEREAKRETDERKNENESTLENEHEQPVTTELEGTQEDLVTEKVVEVKSNKKLLQDEDVEELHLHKEEAREPDFLECEEQESKQKMVESQTSGETRTSNEHIPENERKLEDIGFWDGDETEVEGTAELSVEEQIKRNRCYEDED
SIO_010081: LOC109923569
subclass of: SO_0000673
so part of: LOC109923569
location: complement(join(4132885..4133914,4134915..4135048,4138786..4138889,4139236..4139302,4141614..4141727,4142695..4142787,4148064..4148215,4203498..4203621,4223137..4223619,4229911..4229913))
location: region:4132885-4229913:-1
so has part: feature:4229911-4229913:-1:exon
so has part: feature:4223137-4223619:-1:exon
so has part: feature:4203498-4203621:-1:exon
so has part: feature:4148064-4148215:-1:exon
so has part: feature:4142695-4142787:-1:exon
so has part: feature:4141614-4141727:-1:exon
so has part: feature:4139236-4139302:-1:exon
so has part: feature:4138786-4138889:-1:exon
so has part: feature:4134915-4135048:-1:exon
so has part: feature:4132885-4133914:-1:exon

XP_048474765.1
type: Protein
SIO_000068: ncbiprotein

position:4229913:-1
position: 4229913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4229911-4229913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4223137-4223619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4203498-4203621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4148064-4148215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4142695-4142787:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4141614-4141727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4139236-4139302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4138786-4138889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4134915-4135048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4132885-4133914:-1:exon

LOC109926356
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4159896..4182591
location: region:4159896-4182591:1
so has part: feature:4159896-4182591:1:exon
subclass of: SO_0000010

109926356
type: Gene
SIO_000068: ncbigene

position:4159896:1
position: 4159896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4182591:1
position: 4182591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159896-4182591:1:exon

LOC109926356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926356
product: uncharacterized LOC109926356, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048618803.1
SIO_010081: LOC109926356
subclass of: SO_0000673
so part of: LOC109926356
location: join(4159896..4161811,4163961..4164150,4164726..4164901,4175679..4175792,4180924..4182591)
location: region:4159896-4182591:1
so has part: feature:4159896-4161811:1:exon
so has part: feature:4163961-4164150:1:exon
so has part: feature:4164726-4164901:1:exon
so has part: feature:4175679-4175792:1:exon
so has part: feature:4180924-4182591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4159896-4161811:1:exon

position:4161811:1
position: 4161811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4163961-4164150:1:exon

position:4163961:1
position: 4163961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4164150:1
position: 4164150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4164726-4164901:1:exon

position:4164726:1
position: 4164726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4164901:1
position: 4164901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4175679-4175792:1:exon

position:4175679:1
position: 4175679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4175792:1
position: 4175792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4180924-4182591:1:exon

position:4180924:1
position: 4180924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926356
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109926356
product: uncharacterized LOC109926356, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_007265873.1
SIO_010081: LOC109926356
so part of: LOC109926356
location: join(4159896..4161811,4163961..4164150,4175679..4175792,4180924..4181036)
location: region:4159896-4181036:1
so has part: feature:4159896-4161811:1:exon
so has part: feature:4163961-4164150:1:exon
so has part: feature:4175679-4175792:1:exon
so has part: feature:4180924-4181036:1:exon

position:4181036:1
position: 4181036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159896-4161811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4163961-4164150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4175679-4175792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4180924-4181036:1:exon

LOC109926356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109926356
translation: MLKWWREKKMDPKTLMQLLDMQPMSTAKMVEPNIAKQLGAAVGEIDMILTDIAKSPPCKKAQTIAFRYIRKFIENLHKAFHIRSQEYFEVENELRKSDSFGSQGAEDNLVNELKHLREHSNALKTRAELAEHHYREACSTNYNLENTIKVLRSKVAQLQNIKKTVSHEQITSENLSPSDDMQIKTKQTPKTNKRTTLVKKSRDKIIPVESLRGKYPFSKEHKNILVDGHDRLDEQRIKSTTGKSSFAEPQEQQTILEVSKEGNIPKEKSEGKAIPTEMSNGSIIPTTQPKPEMVLTEVVQCKMHKSDMSAEKKRRASARKEEALKTKAKKMAADLLTDFQTAVLYSLDHGLSSGKELSPGDVCKVQALLKSAELKNLYGVIEKALKEMFAKPVQNTKQEHSEQPIHVLVPTKESQVEKLKEEQPEFTTLAELLEEISRFSIIQEIALDELSAQIQYFIEEAKEDKNMSQEEAHFYEKTLEALDTILTLEKMSSRAGMDQLIRIREATKNLYSINNVLGLKGKEIKLQAEYFKKEGVLLPNMGSETIERTVQPRGKVFQAADTNKIVDGSYIVNVTYLRTNYKTLDQAVYNGIISRQLHAIATHLIHQTLTTVQLRLAYLFRKYITFRHIQTLRNYLNNRMSDVNSKDEEVAEDLYRFANRLEARVKSSMQHWDARQQLVNQSRQKHLNRMTDLFNQLKHRTGLHLFSPFLAKPPNPRTRKQFGSPLQPTFLIASNKPCYLHGQGNCASSAFLRMRNSQMLSTNIVDGSFPIAKKNSAIPASFPETPKLMTMDRKNSFREMLAKTQISIVGESLQTPMKSLSIPSESYVFRQKCGLNPCYIYKQV
SIO_010081: LOC109926356
subclass of: SO_0000673
so part of: LOC109926356
location: join(4159914..4161811,4163961..4164150,4164726..4164901,4175679..4175792,4180924..4181080)
location: region:4159914-4181080:1
so has part: feature:4159914-4161811:1:exon
so has part: feature:4163961-4164150:1:exon
so has part: feature:4164726-4164901:1:exon
so has part: feature:4175679-4175792:1:exon
so has part: feature:4180924-4181080:1:exon

XP_048474760.1
type: Protein
SIO_000068: ncbiprotein

position:4159914:1
position: 4159914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4181080:1
position: 4181080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159914-4161811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4163961-4164150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4164726-4164901:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4175679-4175792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4180924-4181080:1:exon

LOC125487446
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4299017..4307163)
location: region:4299017-4307163:-1
so has part: feature:4299017-4307163:-1:exon
subclass of: SO_0000010

125487446
type: Gene
SIO_000068: ncbigene

position:4299017:-1
position: 4299017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4307163:-1
position: 4307163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4299017-4307163:-1:exon

LOC125487446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487446
product: protein FAM186B-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619015.1
SIO_010081: LOC125487446
subclass of: SO_0000673
so part of: LOC125487446
location: complement(join(4299017..4299376,4299680..4299874,4303413..4303623,4306584..4306725,4306909..4307163))
location: region:4299017-4307163:-1
so has part: feature:4306909-4307163:-1:exon
so has part: feature:4306584-4306725:-1:exon
so has part: feature:4303413-4303623:-1:exon
so has part: feature:4299680-4299874:-1:exon
so has part: feature:4299017-4299376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4306909-4307163:-1:exon

position:4306909:-1
position: 4306909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4306584-4306725:-1:exon

position:4306584:-1
position: 4306584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306725:-1
position: 4306725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4303413-4303623:-1:exon

position:4303413:-1
position: 4303413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4303623:-1
position: 4303623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4299680-4299874:-1:exon

position:4299680:-1
position: 4299680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4299874:-1
position: 4299874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4299017-4299376:-1:exon

position:4299376:-1
position: 4299376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487446
product: protein FAM186B-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048619014.1
SIO_010081: LOC125487446
subclass of: SO_0000673
so part of: LOC125487446
location: complement(join(4299017..4299376,4299680..4299874,4303413..4303623,4306584..4306725,4306860..4307163))
location: region:4299017-4307163:-1
so has part: feature:4306860-4307163:-1:exon
so has part: feature:4306584-4306725:-1:exon
so has part: feature:4303413-4303623:-1:exon
so has part: feature:4299680-4299874:-1:exon
so has part: feature:4299017-4299376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4306860-4307163:-1:exon

position:4306860:-1
position: 4306860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4306584-4306725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4303413-4303623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4299680-4299874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4299017-4299376:-1:exon

LOC125487446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM186B-like isoform X1
translation: MSISDYRQRGVNPGKQSFIHDTWLKVPKDSMDNKEDMNKTDSENIILIPNESDIGLSTTVQRAIGKIETAQLARARQEVAERLKDILDKVNFALSHARFDHQQVPKITLTPEKKEREWLIDTITEFATGNSTKEEILKFILQWLSDSNQTLIDEEDIEEDREVEKRSAEWIEEVNVKVQSSLASSQECIENLHKISKNLFSLQHERIKPKSADADRPAEMLQQFQL
SIO_010081: LOC125487446
subclass of: SO_0000673
so part of: LOC125487446
location: complement(join(4299333..4299376,4299680..4299874,4303413..4303623,4306584..4306725,4306860..4306948))
location: region:4299333-4306948:-1
so has part: feature:4306860-4306948:-1:exon
so has part: feature:4306584-4306725:-1:exon
so has part: feature:4303413-4303623:-1:exon
so has part: feature:4299680-4299874:-1:exon
so has part: feature:4299333-4299376:-1:exon

XP_048474971.1
type: Protein
SIO_000068: ncbiprotein

position:4299333:-1
position: 4299333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306948:-1
position: 4306948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4306860-4306948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4306584-4306725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4303413-4303623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4299680-4299874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4299333-4299376:-1:exon

LOC125487446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM186B-like isoform X2
translation: MDNKEDMNKTDSENIILIPNESDIGLSTTVQRAIGKIETAQLARARQEVAERLKDILDKVNFALSHARFDHQQVPKITLTPEKKEREWLIDTITEFATGNSTKEEILKFILQWLSDSNQTLIDEEDIEEDREVEKRSAEWIEEVNVKVQSSLASSQECIENLHKISKNLFSLQHERIKPKSADADRPAEMLQQFQL
SIO_010081: LOC125487446
subclass of: SO_0000673
so part of: LOC125487446
location: complement(join(4299333..4299376,4299680..4299874,4303413..4303623,4306584..4306724))
location: region:4299333-4306724:-1
so has part: feature:4306584-4306724:-1:exon
so has part: feature:4303413-4303623:-1:exon
so has part: feature:4299680-4299874:-1:exon
so has part: feature:4299333-4299376:-1:exon

XP_048474972.1
type: Protein
SIO_000068: ncbiprotein

position:4306724:-1
position: 4306724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4306584-4306724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4303413-4303623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4299680-4299874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4299333-4299376:-1:exon

LOC109923972
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4307213..4355535
location: region:4307213-4355535:1
so has part: feature:4307213-4355535:1:exon
subclass of: SO_0000010

109923972
type: Gene
SIO_000068: ncbigene

position:4307213:1
position: 4307213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4355535:1
position: 4355535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4307213-4355535:1:exon

LOC109923972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923972
product: cysteine/serine-rich nuclear protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048618845.1
SIO_010081: LOC109923972
subclass of: SO_0000673
so part of: LOC109923972
location: join(4307213..4307586,4313722..4313876,4343312..4343473,4352143..4352402,4355182..4355535)
location: region:4307213-4355535:1
so has part: feature:4307213-4307586:1:exon
so has part: feature:4313722-4313876:1:exon
so has part: feature:4343312-4343473:1:exon
so has part: feature:4352143-4352402:1:exon
so has part: feature:4355182-4355535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4307213-4307586:1:exon

position:4307586:1
position: 4307586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4313722-4313876:1:exon

position:4313722:1
position: 4313722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4313876:1
position: 4313876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4343312-4343473:1:exon

position:4343312:1
position: 4343312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4343473:1
position: 4343473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4352143-4352402:1:exon

position:4352143:1
position: 4352143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4352402:1
position: 4352402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4355182-4355535:1:exon

position:4355182:1
position: 4355182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109923972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine/serine-rich nuclear protein 2-like
translation: MEMAVSIKRKFEEVDGSSLCSSPKESDDDISSSDSADSCDSLNPPTSRELSPTSILKKQKRLRVKNVRFDQVTVYYFTRRQGFTSVPSQGGSSLGMARRHNCIRRYTLCEFAQEQEHLHREMLRDHLKEEKLNVRKMKLTKNGTIESEEANVLTIDDVSDDDIDVDSIEVDDYFFLQPLPTKRRRALLRASGVNRIDTEEKHELRAIRSSREECGCDCRFYCDPEVCPCSKAGIKCQVRSKLMANRSDYYTTSGD
SIO_010081: LOC109923972
subclass of: SO_0000673
so part of: LOC109923972
location: join(4343320..4343473,4352143..4352402,4355182..4355535)
location: region:4343320-4355535:1
so has part: feature:4343320-4343473:1:exon
so has part: feature:4352143-4352402:1:exon
so has part: feature:4355182-4355535:1:exon

XP_048474802.1
type: Protein
SIO_000068: ncbiprotein

position:4343320:1
position: 4343320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4343320-4343473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4352143-4352402:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4355182-4355535:1:exon

letmd1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: letmd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4378011..4395808)
location: region:4378011-4395808:-1
so has part: feature:4378011-4395808:-1:exon
subclass of: SO_0000010

109923973
type: Gene
SIO_000068: ncbigene

position:4378011:-1
position: 4378011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4395808:-1
position: 4395808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4378011-4395808:-1:exon

letmd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: letmd1
product: LETM1 domain containing 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618923.1
SIO_010081: letmd1
subclass of: SO_0000673
so part of: letmd1
location: complement(join(4378011..4380391,4381979..4382075,4383812..4383964,4384250..4384351,4385675..4385861,4388943..4389025,4390053..4390168,4393525..4393673,4395692..4395808))
location: region:4378011-4395808:-1
so has part: feature:4395692-4395808:-1:exon
so has part: feature:4393525-4393673:-1:exon
so has part: feature:4390053-4390168:-1:exon
so has part: feature:4388943-4389025:-1:exon
so has part: feature:4385675-4385861:-1:exon
so has part: feature:4384250-4384351:-1:exon
so has part: feature:4383812-4383964:-1:exon
so has part: feature:4381979-4382075:-1:exon
so has part: feature:4378011-4380391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4395692-4395808:-1:exon

position:4395692:-1
position: 4395692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4393525-4393673:-1:exon

position:4393525:-1
position: 4393525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4393673:-1
position: 4393673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4390053-4390168:-1:exon

position:4390053:-1
position: 4390053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4390168:-1
position: 4390168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4388943-4389025:-1:exon

position:4388943:-1
position: 4388943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4389025:-1
position: 4389025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4385675-4385861:-1:exon

position:4385675:-1
position: 4385675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385861:-1
position: 4385861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4384250-4384351:-1:exon

position:4384250:-1
position: 4384250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4384351:-1
position: 4384351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4383812-4383964:-1:exon

position:4383812:-1
position: 4383812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4383964:-1
position: 4383964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4381979-4382075:-1:exon

position:4381979:-1
position: 4381979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4382075:-1
position: 4382075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4378011-4380391:-1:exon

position:4380391:-1
position: 4380391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

letmd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: letmd1
product: LETM1 domain containing 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618922.1
SIO_010081: letmd1
subclass of: SO_0000673
so part of: letmd1
location: complement(join(4378011..4380391,4381979..4382075,4383812..4383964,4384250..4384351,4385675..4385861,4388943..4389025,4390053..4390168,4393525..4393673,4395555..4395608,4395692..4395808))
location: region:4378011-4395808:-1
so has part: feature:4395692-4395808:-1:exon
so has part: feature:4395555-4395608:-1:exon
so has part: feature:4393525-4393673:-1:exon
so has part: feature:4390053-4390168:-1:exon
so has part: feature:4388943-4389025:-1:exon
so has part: feature:4385675-4385861:-1:exon
so has part: feature:4384250-4384351:-1:exon
so has part: feature:4383812-4383964:-1:exon
so has part: feature:4381979-4382075:-1:exon
so has part: feature:4378011-4380391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4395692-4395808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4395555-4395608:-1:exon

position:4395555:-1
position: 4395555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4395608:-1
position: 4395608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4393525-4393673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4390053-4390168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4388943-4389025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4385675-4385861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4384250-4384351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4383812-4383964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4381979-4382075:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4378011-4380391:-1:exon

letmd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: letmd1
product: LETM1 domain containing 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618926.1
SIO_010081: letmd1
subclass of: SO_0000673
so part of: letmd1
location: complement(join(4378011..4380391,4381979..4382075,4383812..4383964,4384250..4384351,4385675..4385861,4388943..4389025,4390053..4390168,4395692..4395786))
location: region:4378011-4395786:-1
so has part: feature:4395692-4395786:-1:exon
so has part: feature:4390053-4390168:-1:exon
so has part: feature:4388943-4389025:-1:exon
so has part: feature:4385675-4385861:-1:exon
so has part: feature:4384250-4384351:-1:exon
so has part: feature:4383812-4383964:-1:exon
so has part: feature:4381979-4382075:-1:exon
so has part: feature:4378011-4380391:-1:exon

position:4395786:-1
position: 4395786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4395692-4395786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4390053-4390168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4388943-4389025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4385675-4385861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4384250-4384351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4383812-4383964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4381979-4382075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4378011-4380391:-1:exon

letmd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: letmd1
product: LETM1 domain containing 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618924.1
SIO_010081: letmd1
subclass of: SO_0000673
so part of: letmd1
location: complement(join(4378011..4380391,4381979..4382075,4383812..4383964,4384250..4384351,4385675..4385861,4388943..4389025,4390053..4390168,4395686..4395768))
location: region:4378011-4395768:-1
so has part: feature:4395686-4395768:-1:exon
so has part: feature:4390053-4390168:-1:exon
so has part: feature:4388943-4389025:-1:exon
so has part: feature:4385675-4385861:-1:exon
so has part: feature:4384250-4384351:-1:exon
so has part: feature:4383812-4383964:-1:exon
so has part: feature:4381979-4382075:-1:exon
so has part: feature:4378011-4380391:-1:exon

position:4395768:-1
position: 4395768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4395686-4395768:-1:exon

position:4395686:-1
position: 4395686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4390053-4390168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4388943-4389025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4385675-4385861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4384250-4384351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4383812-4383964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4381979-4382075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4378011-4380391:-1:exon

letmd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: letmd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LETM1 domain-containing protein 1 isoform X2
translation: MALTRGCFRFRGLRGCCFPEFLHYPTVYVSQLTGHPLSQFFTTAKRSTIISKAKRLNAKYEQFLERNFPRFYVIYSTFFRGFRLLFLDFKEVSGIKRKMADQGLKYSQLHYREMEKLRQFRRDIIKVIPVVLLSLPPFANYMVFVLMYFFPRQLLIRHFWTLEQQKEFMEIYHSLRAQVYPNAVKNLIKAVSKVPDKRLKNQLLQLGTKVQEGIHPEISQLYLVAKLFSGRPLEIRYVNARQMKILSQVMFLTPHLPTFIMRRRLRSHIMEIHHLDQALNILGVQNLSEDELRIACYVRGLNSVQLNAAECKEWLTKWVQLSKKLKDSEASLLLHSMVLLSTNYHNSRKSK
SIO_010081: letmd1
subclass of: SO_0000673
so part of: letmd1
location: complement(join(4380315..4380391,4381979..4382075,4383812..4383964,4384250..4384351,4385675..4385861,4388943..4389025,4390053..4390168,4393525..4393673,4395692..4395783))
location: region:4380315-4395783:-1
so has part: feature:4395692-4395783:-1:exon
so has part: feature:4393525-4393673:-1:exon
so has part: feature:4390053-4390168:-1:exon
so has part: feature:4388943-4389025:-1:exon
so has part: feature:4385675-4385861:-1:exon
so has part: feature:4384250-4384351:-1:exon
so has part: feature:4383812-4383964:-1:exon
so has part: feature:4381979-4382075:-1:exon
so has part: feature:4380315-4380391:-1:exon

XP_048474880.1
type: Protein
SIO_000068: ncbiprotein

position:4380315:-1
position: 4380315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4395783:-1
position: 4395783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4395692-4395783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4393525-4393673:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4390053-4390168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4388943-4389025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4385675-4385861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4384250-4384351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4383812-4383964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4381979-4382075:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4380315-4380391:-1:exon

letmd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: letmd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LETM1 domain-containing protein 1 isoform X1
translation: MALTRGCFRFRGLRGCCFPEFLHYPTVYVSQWPSSTTERQIQARRIVNTLTGHPLSQFFTTAKRSTIISKAKRLNAKYEQFLERNFPRFYVIYSTFFRGFRLLFLDFKEVSGIKRKMADQGLKYSQLHYREMEKLRQFRRDIIKVIPVVLLSLPPFANYMVFVLMYFFPRQLLIRHFWTLEQQKEFMEIYHSLRAQVYPNAVKNLIKAVSKVPDKRLKNQLLQLGTKVQEGIHPEISQLYLVAKLFSGRPLEIRYVNARQMKILSQVMFLTPHLPTFIMRRRLRSHIMEIHHLDQALNILGVQNLSEDELRIACYVRGLNSVQLNAAECKEWLTKWVQLSKKLKDSEASLLLHSMVLLSTNYHNSRKSK
SIO_010081: letmd1
subclass of: SO_0000673
so part of: letmd1
location: complement(join(4380315..4380391,4381979..4382075,4383812..4383964,4384250..4384351,4385675..4385861,4388943..4389025,4390053..4390168,4393525..4393673,4395555..4395608,4395692..4395783))
location: region:4380315-4395783:-1
so has part: feature:4395692-4395783:-1:exon
so has part: feature:4395555-4395608:-1:exon
so has part: feature:4393525-4393673:-1:exon
so has part: feature:4390053-4390168:-1:exon
so has part: feature:4388943-4389025:-1:exon
so has part: feature:4385675-4385861:-1:exon
so has part: feature:4384250-4384351:-1:exon
so has part: feature:4383812-4383964:-1:exon
so has part: feature:4381979-4382075:-1:exon
so has part: feature:4380315-4380391:-1:exon

XP_048474879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4395692-4395783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4395555-4395608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4393525-4393673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4390053-4390168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4388943-4389025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4385675-4385861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4384250-4384351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4383812-4383964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4381979-4382075:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4380315-4380391:-1:exon

letmd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: letmd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LETM1 domain-containing protein 1 isoform X4
translation: MYPSFRLLFLDFKEVSGIKRKMADQGLKYSQLHYREMEKLRQFRRDIIKVIPVVLLSLPPFANYMVFVLMYFFPRQLLIRHFWTLEQQKEFMEIYHSLRAQVYPNAVKNLIKAVSKVPDKRLKNQLLQLGTKVQEGIHPEISQLYLVAKLFSGRPLEIRYVNARQMKILSQVMFLTPHLPTFIMRRRLRSHIMEIHHLDQALNILGVQNLSEDELRIACYVRGLNSVQLNAAECKEWLTKWVQLSKKLKDSEASLLLHSMVLLSTNYHNSRKSK
SIO_010081: letmd1
subclass of: SO_0000673
so part of: letmd1
location: complement(join(4380315..4380391,4381979..4382075,4383812..4383964,4384250..4384351,4385675..4385861,4388943..4389025,4390053..4390168,4395692..4395701))
location: region:4380315-4395701:-1
so has part: feature:4395692-4395701:-1:exon
so has part: feature:4390053-4390168:-1:exon
so has part: feature:4388943-4389025:-1:exon
so has part: feature:4385675-4385861:-1:exon
so has part: feature:4384250-4384351:-1:exon
so has part: feature:4383812-4383964:-1:exon
so has part: feature:4381979-4382075:-1:exon
so has part: feature:4380315-4380391:-1:exon

XP_048474883.1
type: Protein
SIO_000068: ncbiprotein

position:4395701:-1
position: 4395701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4395692-4395701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4390053-4390168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4388943-4389025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4385675-4385861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4384250-4384351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4383812-4383964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4381979-4382075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4380315-4380391:-1:exon

letmd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: letmd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LETM1 domain-containing protein 1 isoform X3
translation: MYPSKSFRLLFLDFKEVSGIKRKMADQGLKYSQLHYREMEKLRQFRRDIIKVIPVVLLSLPPFANYMVFVLMYFFPRQLLIRHFWTLEQQKEFMEIYHSLRAQVYPNAVKNLIKAVSKVPDKRLKNQLLQLGTKVQEGIHPEISQLYLVAKLFSGRPLEIRYVNARQMKILSQVMFLTPHLPTFIMRRRLRSHIMEIHHLDQALNILGVQNLSEDELRIACYVRGLNSVQLNAAECKEWLTKWVQLSKKLKDSEASLLLHSMVLLSTNYHNSRKSK
SIO_010081: letmd1
subclass of: SO_0000673
so part of: letmd1
location: complement(join(4380315..4380391,4381979..4382075,4383812..4383964,4384250..4384351,4385675..4385861,4388943..4389025,4390053..4390168,4395686..4395701))
location: region:4380315-4395701:-1
so has part: feature:4395686-4395701:-1:exon
so has part: feature:4390053-4390168:-1:exon
so has part: feature:4388943-4389025:-1:exon
so has part: feature:4385675-4385861:-1:exon
so has part: feature:4384250-4384351:-1:exon
so has part: feature:4383812-4383964:-1:exon
so has part: feature:4381979-4382075:-1:exon
so has part: feature:4380315-4380391:-1:exon

XP_048474881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4395686-4395701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4390053-4390168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4388943-4389025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4385675-4385861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4384250-4384351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4383812-4383964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4381979-4382075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4380315-4380391:-1:exon

LOC125487429
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4381296..4390060
location: region:4381296-4390060:1
so has part: feature:4381296-4390060:1:exon
subclass of: SO_0000011

125487429
type: Gene
SIO_000068: ncbigene

position:4381296:1
position: 4381296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4390060:1
position: 4390060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4381296-4390060:1:exon

LOC125487429
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487429
product: uncharacterized LOC125487429
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007265891.1
SIO_010081: LOC125487429
subclass of: SO_0000673
so part of: LOC125487429
location: join(4381296..4383920,4384621..4384703,4387514..4387570,4388776..4388997,4389862..4390060)
location: region:4381296-4390060:1
so has part: feature:4381296-4383920:1:exon
so has part: feature:4384621-4384703:1:exon
so has part: feature:4387514-4387570:1:exon
so has part: feature:4388776-4388997:1:exon
so has part: feature:4389862-4390060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4381296-4383920:1:exon

position:4383920:1
position: 4383920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4384621-4384703:1:exon

position:4384621:1
position: 4384621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4384703:1
position: 4384703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4387514-4387570:1:exon

position:4387514:1
position: 4387514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4387570:1
position: 4387570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4388776-4388997:1:exon

position:4388776:1
position: 4388776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4388997:1
position: 4388997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4389862-4390060:1:exon

position:4389862:1
position: 4389862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925812
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4409757..4422853)
location: region:4409757-4422853:-1
so has part: feature:4409757-4422853:-1:exon
subclass of: SO_0000010

109925812
type: Gene
SIO_000068: ncbigene

position:4409757:-1
position: 4409757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4422853:-1
position: 4422853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4409757-4422853:-1:exon

LOC109925812
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925812
product: chymotrypsin-like elastase family member 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618846.1
SIO_010081: LOC109925812
subclass of: SO_0000673
so part of: LOC109925812
location: complement(join(4409757..4409863,4410645..4410794,4418121..4418266,4419067..4419203,4419687..4419812,4421390..4421415,4421681..4421748,4422799..4422853))
location: region:4409757-4422853:-1
so has part: feature:4422799-4422853:-1:exon
so has part: feature:4421681-4421748:-1:exon
so has part: feature:4421390-4421415:-1:exon
so has part: feature:4419687-4419812:-1:exon
so has part: feature:4419067-4419203:-1:exon
so has part: feature:4418121-4418266:-1:exon
so has part: feature:4410645-4410794:-1:exon
so has part: feature:4409757-4409863:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4422799-4422853:-1:exon

position:4422799:-1
position: 4422799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4421681-4421748:-1:exon

position:4421681:-1
position: 4421681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4421748:-1
position: 4421748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4421390-4421415:-1:exon

position:4421390:-1
position: 4421390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4421415:-1
position: 4421415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4419687-4419812:-1:exon

position:4419687:-1
position: 4419687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4419812:-1
position: 4419812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4419067-4419203:-1:exon

position:4419067:-1
position: 4419067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4419203:-1
position: 4419203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4418121-4418266:-1:exon

position:4418121:-1
position: 4418121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4418266:-1
position: 4418266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4410645-4410794:-1:exon

position:4410645:-1
position: 4410645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4410794:-1
position: 4410794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4409757-4409863:-1:exon

position:4409863:-1
position: 4409863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109925812
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chymotrypsin-like elastase family member 1
translation: MLRLVVLVSLALLGQCFETPRIIGGVESQPNAWPWQMTAGHCVDFPGLVYRVALGDHNIYETEGPEQYILVDKVVVNKKWSGDLSVGHDIAMVRLAQEAILNDKVQLALLPQKGEILPNDYLCYATGWGYTFNGGEVSPTLQQTPIRTVDYKTCSRPDLWGYYVKDIMVCAGGDGFVSGCQGDSGGPLNCEQGGKFYVHGVTSFIYAGGCRFYMKPTVWTRVSAEIDWINEVITKG
SIO_010081: LOC109925812
subclass of: SO_0000673
so part of: LOC109925812
location: complement(join(4409846..4409863,4410645..4410794,4418121..4418266,4419067..4419203,4419687..4419812,4421390..4421415,4421681..4421748,4422799..4422838))
location: region:4409846-4422838:-1
so has part: feature:4422799-4422838:-1:exon
so has part: feature:4421681-4421748:-1:exon
so has part: feature:4421390-4421415:-1:exon
so has part: feature:4419687-4419812:-1:exon
so has part: feature:4419067-4419203:-1:exon
so has part: feature:4418121-4418266:-1:exon
so has part: feature:4410645-4410794:-1:exon
so has part: feature:4409846-4409863:-1:exon

XP_048474803.1
type: Protein
SIO_000068: ncbiprotein

position:4409846:-1
position: 4409846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4422838:-1
position: 4422838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4422799-4422838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4421681-4421748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4421390-4421415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4419687-4419812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4419067-4419203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4418121-4418266:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4410645-4410794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4409846-4409863:-1:exon

LOC109926019
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109926019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <4437195..4465168
location: region:4437195-4465168:1
so has part: feature:4437195-4465168:1:exon
subclass of: SO_0000010

109926019
type: Gene
SIO_000068: ncbigene

position:4437195:1
position: 4437195
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:4465168:1
position: 4465168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4437195-4465168:1:exon

LOC109926019
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109926019
product: polypeptide N-acetylgalactosaminyltransferase 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048618847.1
SIO_010081: LOC109926019
subclass of: SO_0000673
so part of: LOC109926019
location: join(<4437195..4437436,4438378..4438550,4452679..4452828,4454540..4454774,4460611..4460728,4464487..4464687,4465063..4465168)
location: region:4437195-4465168:1
so has part: feature:4437195-4437436:1:exon
so has part: feature:4438378-4438550:1:exon
so has part: feature:4452679-4452828:1:exon
so has part: feature:4454540-4454774:1:exon
so has part: feature:4460611-4460728:1:exon
so has part: feature:4464487-4464687:1:exon
so has part: feature:4465063-4465168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4437195-4437436:1:exon

position:4437436:1
position: 4437436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4438378-4438550:1:exon

position:4438378:1
position: 4438378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4438550:1
position: 4438550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4452679-4452828:1:exon

position:4452679:1
position: 4452679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4452828:1
position: 4452828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4454540-4454774:1:exon

position:4454540:1
position: 4454540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4454774:1
position: 4454774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4460611-4460728:1:exon

position:4460611:1
position: 4460611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4460728:1
position: 4460728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4464487-4464687:1:exon

position:4464487:1
position: 4464487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4464687:1
position: 4464687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4465063-4465168:1:exon

position:4465063:1
position: 4465063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109926019
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109926019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 3-like
translation: DDSKSCLPGFYTGAELKTFLARPPEDPNAPGADAKAFHTDNLSPEQQEEKTRGLDKHCFNAYASDRISLHRTLGPDTRPPECIEQRFKRCPPLPSTSVIIVFHNEAWSTLLRTVYSVMHTSPAILLKEILLVDDASTDDYLKEQLDEYVKQFRIVKVVRQVERTGLITARLLGASVATGEVLTFLDAHCECFNGWLEPLLGRIAENYTAVVSPDITTIDLNTFEVSKPVQYGRQHNRGNFDWSLSFGWEAIPSHEIERRKDETYPIKTPTFAGGLFAISKAYFELIGTYDNQMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHSFPKGVQVIARNQVRLAEVWMDQYKELFYRRNQQAAKMAQE
SIO_010081: LOC109926019
subclass of: SO_0000673
so part of: LOC109926019
location: join(<4437195..4437436,4438378..4438550,4452679..4452828,4454540..4454774,4460611..4460728,4464487..4464687,4465063..4465065)
location: region:4437195-4465065:1
so has part: feature:4437195-4437436:1:exon
so has part: feature:4438378-4438550:1:exon
so has part: feature:4452679-4452828:1:exon
so has part: feature:4454540-4454774:1:exon
so has part: feature:4460611-4460728:1:exon
so has part: feature:4464487-4464687:1:exon
so has part: feature:4465063-4465065:1:exon

XP_048474804.1
type: Protein
SIO_000068: ncbiprotein

position:4465065:1
position: 4465065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4437195-4437436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4438378-4438550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4452679-4452828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4454540-4454774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4460611-4460728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4464487-4464687:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465063-4465065:1:exon

LOC125487444
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4477577..4483642
location: region:4477577-4483642:1
so has part: feature:4477577-4483642:1:exon
subclass of: SO_0000011

125487444
type: Gene
SIO_000068: ncbigene

position:4477577:1
position: 4477577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4483642:1
position: 4483642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4477577-4483642:1:exon

LOC125487444
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125487444
product: uncharacterized LOC125487444
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007265901.1
SIO_010081: LOC125487444
subclass of: SO_0000673
so part of: LOC125487444
location: join(4477577..4478397,4483209..4483642)
location: region:4477577-4483642:1
so has part: feature:4477577-4478397:1:exon
so has part: feature:4483209-4483642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4477577-4478397:1:exon

position:4478397:1
position: 4478397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4483209-4483642:1:exon

position:4483209:1
position: 4483209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125487416
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125487416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4503167..4509398)
location: region:4503167-4509398:-1
so has part: feature:4503167-4509398:-1:exon
subclass of: SO_0000010

125487416
type: Gene
SIO_000068: ncbigene

position:4503167:-1
position: 4503167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4509398:-1
position: 4509398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4503167-4509398:-1:exon

LOC125487416
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125487416
product: uncharacterized LOC125487416
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618848.1
SIO_010081: LOC125487416
subclass of: SO_0000673
so part of: LOC125487416
location: complement(join(4503167..4503346,4506489..4507084,4509287..4509398))
location: region:4503167-4509398:-1
so has part: feature:4509287-4509398:-1:exon
so has part: feature:4506489-4507084:-1:exon
so has part: feature:4503167-4503346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4509287-4509398:-1:exon

position:4509287:-1
position: 4509287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4506489-4507084:-1:exon

position:4506489:-1
position: 4506489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4507084:-1
position: 4507084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4503167-4503346:-1:exon

position:4503346:-1
position: 4503346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125487416
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125487416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125487416
translation: MEETFELLYQEFKRLKTVCERQAEIIKELTEKREMTTDRPFTVPIQCTDAGKPDQSEGPFLKPQKQKDLQVAACSVPTDSQDIMVDRKHGKELDYCSKLDIRFLPRSGEYNFLISEPEKLHHLHTVHQPEPPTPTDESVSDSLSNLYDDCRCPFNFNVDRSSWEQPTMSTPQHILGEGGVILRSNCLFQERQYSGSDLENVPEQRSLNPAVGYCSTDCLSVLPELFIRSENMEPQQSSRSHHCLAEDCHTGHETTLNSESCLNSQVCEFCQAVFPAGAATRDDYLVHLTGHIEFE
SIO_010081: LOC125487416
subclass of: SO_0000673
so part of: LOC125487416
location: complement(join(4503167..4503346,4506489..4507084,4509287..4509398))
location: region:4503167-4509398:-1
so has part: feature:4509287-4509398:-1:exon
so has part: feature:4506489-4507084:-1:exon
so has part: feature:4503167-4503346:-1:exon

XP_048474805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4509287-4509398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4506489-4507084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4503167-4503346:-1:exon

LOC109934285
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109934285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4609620..4826395
location: region:4609620-4826395:1
so has part: feature:4609620-4826395:1:exon
subclass of: SO_0000010

109934285
type: Gene
SIO_000068: ncbigene

position:4609620:1
position: 4609620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4826395:1
position: 4826395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4609620-4826395:1:exon

LOC109934285
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109934285
product: electroneutral sodium bicarbonate exchanger 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 114 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048618849.1
SIO_010081: LOC109934285
subclass of: SO_0000673
so part of: LOC109934285
location: join(4609620..4609701,4667864..4668007,4705102..4705153,4706143..4706257,4712061..4712218,4740244..4740331,4744810..4744956,4750721..4750821,4758605..4758779,4767799..4767932,4772259..4772504,4778268..4778373,4782364..4782525,4786372..4786485,4798332..4798493,4799632..4799883,4809212..4809280,4810011..4810184,4821534..4821668,4825705..4826395)
location: region:4609620-4826395:1
so has part: feature:4609620-4609701:1:exon
so has part: feature:4667864-4668007:1:exon
so has part: feature:4705102-4705153:1:exon
so has part: feature:4706143-4706257:1:exon
so has part: feature:4712061-4712218:1:exon
so has part: feature:4740244-4740331:1:exon
so has part: feature:4744810-4744956:1:exon
so has part: feature:4750721-4750821:1:exon
so has part: feature:4758605-4758779:1:exon
so has part: feature:4767799-4767932:1:exon
so has part: feature:4772259-4772504:1:exon
so has part: feature:4778268-4778373:1:exon
so has part: feature:4782364-4782525:1:exon
so has part: feature:4786372-4786485:1:exon
so has part: feature:4798332-4798493:1:exon
so has part: feature:4799632-4799883:1:exon
so has part: feature:4809212-4809280:1:exon
so has part: feature:4810011-4810184:1:exon
so has part: feature:4821534-4821668:1:exon
so has part: feature:4825705-4826395:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4609620-4609701:1:exon

position:4609701:1
position: 4609701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4667864-4668007:1:exon

position:4667864:1
position: 4667864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4668007:1
position: 4668007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4705102-4705153:1:exon

position:4705102:1
position: 4705102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4705153:1
position: 4705153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4706143-4706257:1:exon

position:4706143:1
position: 4706143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4706257:1
position: 4706257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4712061-4712218:1:exon

position:4712061:1
position: 4712061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4712218:1
position: 4712218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4740244-4740331:1:exon

position:4740244:1
position: 4740244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4740331:1
position: 4740331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4744810-4744956:1:exon

position:4744810:1
position: 4744810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4744956:1
position: 4744956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4750721-4750821:1:exon

position:4750721:1
position: 4750721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4750821:1
position: 4750821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4758605-4758779:1:exon

position:4758605:1
position: 4758605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4758779:1
position: 4758779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4767799-4767932:1:exon

position:4767799:1
position: 4767799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4767932:1
position: 4767932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4772259-4772504:1:exon

position:4772259:1
position: 4772259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4772504:1
position: 4772504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4778268-4778373:1:exon

position:4778268:1
position: 4778268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4778373:1
position: 4778373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4782364-4782525:1:exon

position:4782364:1
position: 4782364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4782525:1
position: 4782525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4786372-4786485:1:exon

position:4786372:1
position: 4786372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4786485:1
position: 4786485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4798332-4798493:1:exon

position:4798332:1
position: 4798332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4798493:1
position: 4798493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4799632-4799883:1:exon

position:4799632:1
position: 4799632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4799883:1
position: 4799883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4809212-4809280:1:exon

position:4809212:1
position: 4809212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4809280:1
position: 4809280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4810011-4810184:1:exon

position:4810011:1
position: 4810011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4810184:1
position: 4810184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4821534-4821668:1:exon

position:4821534:1
position: 4821534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4821668:1
position: 4821668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4825705-4826395:1:exon

position:4825705:1
position: 4825705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109934285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109934285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electroneutral sodium bicarbonate exchanger 1-like
translation: MPLGRQSHRHHRTHGSKHKKREKVKGTGQEEGKDNLTYDTKPRSLAQLTTGLGPLSCSFLLSSSGQMLSPQSLPTHLEAKNGVNQDNVNFESGKVDLHFMKKIPTGAEASNVLVGELDFLKRPIVAFVRLSPAILLTGLTEVPIPTRFLFILLGPVGKAQQYHEIGRSMATIMTDEIFHDVAYKAKDRSDLLAGIDEFLDQVTVLPPGEWDPSIRIEPPKNVPSQEKRKQPGIPNGNACHVEPEPQVGHSGPELQRTGRLFGGLILDVKRKMPCFWSDFRDAFSLQCVASFLFLYCACMSPVITFGGLLGEATEGRISAIESLFGASMTGIAYSLFAGQPLTILGSTGPVLVFEKILFKFCKDYNLSYLSLRANIGLWTSFLCILLVATDASSLVCYITRFTEEAFASLICIIFIYEALEKLIHLGEIYSFNMHTNLDQLTQYFCICTEPRNPDNRTLEYWEKHNITRSSVPWANLTVSDCRTFHGEFVGPSCGHHGPYTPDVLFWSVILFFSTFALSGFLKQFKTSHYFPTKVRSMISDFAVFLTILSMVLIDYALGIPSPKLQVPSVFKPTRDDRGWLINPIGPNPWWTVIAAIIPALLCTILIFMDQQITAVIINRKEHKLKKGCGYHLDLLMVAVMLGVCSVMGLPWFVAATVLSISHVNSLKLESECSAPGEQPKFLGIREQRVTGLMIFVLMGCSVFMTGFLKFIPMPVLYGVFLYMGVSSLKGIQFFDRLQLFAMPAKHQPDFIYLRHVPLRKVHLFTLIQLTCLVLLWVIKASPAAIVFPMMVLALVFVRKLMDLCFLKRELSWLDDLMPESKKKKLDDAKKVKEDGIAFFLDCGLKTMYTPLKKKKYKKLFAA
SIO_010081: LOC109934285
subclass of: SO_0000673
so part of: LOC109934285
location: join(4667893..4668007,4705102..4705153,4706143..4706257,4712061..4712218,4740244..4740331,4744810..4744956,4750721..4750821,4758605..4758779,4767799..4767932,4772259..4772504,4778268..4778373,4782364..4782525,4786372..4786485,4798332..4798493,4799632..4799883,4809212..4809280,4810011..4810184,4821534..4821668,4825705..4825788)
location: region:4667893-4825788:1
so has part: feature:4667893-4668007:1:exon
so has part: feature:4705102-4705153:1:exon
so has part: feature:4706143-4706257:1:exon
so has part: feature:4712061-4712218:1:exon
so has part: feature:4740244-4740331:1:exon
so has part: feature:4744810-4744956:1:exon
so has part: feature:4750721-4750821:1:exon
so has part: feature:4758605-4758779:1:exon
so has part: feature:4767799-4767932:1:exon
so has part: feature:4772259-4772504:1:exon
so has part: feature:4778268-4778373:1:exon
so has part: feature:4782364-4782525:1:exon
so has part: feature:4786372-4786485:1:exon
so has part: feature:4798332-4798493:1:exon
so has part: feature:4799632-4799883:1:exon
so has part: feature:4809212-4809280:1:exon
so has part: feature:4810011-4810184:1:exon
so has part: feature:4821534-4821668:1:exon
so has part: feature:4825705-4825788:1:exon

XP_048474806.1
type: Protein
SIO_000068: ncbiprotein

position:4667893:1
position: 4667893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4825788:1
position: 4825788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4667893-4668007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4705102-4705153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4706143-4706257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4712061-4712218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4740244-4740331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4744810-4744956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4750721-4750821:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4758605-4758779:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4767799-4767932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4772259-4772504:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4778268-4778373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4782364-4782525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4786372-4786485:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4798332-4798493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4799632-4799883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4809212-4809280:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4810011-4810184:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4821534-4821668:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4825705-4825788:1:exon

esyt1a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: esyt1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4870726..5000306)
location: region:4870726-5000306:-1
so has part: feature:4870726-5000306:-1:exon
subclass of: SO_0000010

109924104
type: Gene
SIO_000068: ncbigene

position:4870726:-1
position: 4870726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5000306:-1
position: 5000306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4870726-5000306:-1:exon

esyt1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: esyt1a
product: extended synaptotagmin-like protein 1a, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618902.1
SIO_010081: esyt1a
subclass of: SO_0000673
so part of: esyt1a
location: complement(join(4870726..4874715,4875552..4875601,4876839..4876935,4879680..4879811,4882370..4882462,4882764..4882999,4884234..4884377,4884651..4884737,4888575..4888646,4889043..4889138,4889873..4889962,4892100..4892148,4892751..4892833,4893135..4893311,4894788..4894985,4897136..4897285,4898058..4898144,4899882..4899953,4908213..4908308,4910002..4910091,4912754..4912802,4913783..4913865,4918370..4918546,4922576..4922696,4923426..4923481,4927244..4927333,4929898..4929970,4941380..4941453,4942691..4942825,4946100..4946141,4999355..5000306))
location: region:4870726-5000306:-1
so has part: feature:4999355-5000306:-1:exon
so has part: feature:4946100-4946141:-1:exon
so has part: feature:4942691-4942825:-1:exon
so has part: feature:4941380-4941453:-1:exon
so has part: feature:4929898-4929970:-1:exon
so has part: feature:4927244-4927333:-1:exon
so has part: feature:4923426-4923481:-1:exon
so has part: feature:4922576-4922696:-1:exon
so has part: feature:4918370-4918546:-1:exon
so has part: feature:4913783-4913865:-1:exon
so has part: feature:4912754-4912802:-1:exon
so has part: feature:4910002-4910091:-1:exon
so has part: feature:4908213-4908308:-1:exon
so has part: feature:4899882-4899953:-1:exon
so has part: feature:4898058-4898144:-1:exon
so has part: feature:4897136-4897285:-1:exon
so has part: feature:4894788-4894985:-1:exon
so has part: feature:4893135-4893311:-1:exon
so has part: feature:4892751-4892833:-1:exon
so has part: feature:4892100-4892148:-1:exon
so has part: feature:4889873-4889962:-1:exon
so has part: feature:4889043-4889138:-1:exon
so has part: feature:4888575-4888646:-1:exon
so has part: feature:4884651-4884737:-1:exon
so has part: feature:4884234-4884377:-1:exon
so has part: feature:4882764-4882999:-1:exon
so has part: feature:4882370-4882462:-1:exon
so has part: feature:4879680-4879811:-1:exon
so has part: feature:4876839-4876935:-1:exon
so has part: feature:4875552-4875601:-1:exon
so has part: feature:4870726-4874715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4999355-5000306:-1:exon

position:4999355:-1
position: 4999355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4946100-4946141:-1:exon

position:4946100:-1
position: 4946100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4946141:-1
position: 4946141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4942691-4942825:-1:exon

position:4942691:-1
position: 4942691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4942825:-1
position: 4942825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4941380-4941453:-1:exon

position:4941380:-1
position: 4941380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4941453:-1
position: 4941453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4929898-4929970:-1:exon

position:4929898:-1
position: 4929898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4929970:-1
position: 4929970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4927244-4927333:-1:exon

position:4927244:-1
position: 4927244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4927333:-1
position: 4927333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4923426-4923481:-1:exon

position:4923426:-1
position: 4923426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4923481:-1
position: 4923481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4922576-4922696:-1:exon

position:4922576:-1
position: 4922576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4922696:-1
position: 4922696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4918370-4918546:-1:exon

position:4918370:-1
position: 4918370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4918546:-1
position: 4918546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4913783-4913865:-1:exon

position:4913783:-1
position: 4913783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4913865:-1
position: 4913865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4912754-4912802:-1:exon

position:4912754:-1
position: 4912754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4912802:-1
position: 4912802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4910002-4910091:-1:exon

position:4910002:-1
position: 4910002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4910091:-1
position: 4910091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4908213-4908308:-1:exon

position:4908213:-1
position: 4908213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4908308:-1
position: 4908308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4899882-4899953:-1:exon

position:4899882:-1
position: 4899882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4899953:-1
position: 4899953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4898058-4898144:-1:exon

position:4898058:-1
position: 4898058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4898144:-1
position: 4898144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4897136-4897285:-1:exon

position:4897136:-1
position: 4897136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4897285:-1
position: 4897285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4894788-4894985:-1:exon

position:4894788:-1
position: 4894788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4894985:-1
position: 4894985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4893135-4893311:-1:exon

position:4893135:-1
position: 4893135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4893311:-1
position: 4893311
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esyt1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: esyt1a
product: extended synaptotagmin-like protein 1a, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048618903.1
SIO_010081: esyt1a
subclass of: SO_0000673
so part of: esyt1a
location: complement(join(4870726..4874715,4875552..4875601,4876839..4876935,4879680..4879811,4882370..4882462,4882764..4882999,4884234..4884377,4884651..4884737,4888575..4888646,4889043..4889138,4889873..4889962,4892100..4892148,4892751..4892833,4893135..4893311,4894788..4894985,4897136..4897285,4898058..4898144,4899882..4899953,4908213..4908308,4910002..4910091,4912754..4912802,4913783..4913865,4918370..4918546,4922576..4922696,4923426..4923481,4927244..4927333,4941380..4941440))
location: region:4870726-4941440:-1
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SIO_000300: 1
SIO_000628: feature:4941380-4941440:-1:exon

urn:…
SIO_000300: 2
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