Rhincodon typus isolate 14 chromosome 38, sRhiTyp1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
REFSEQ INFORMATION: The reference sequence is identical to\nCM038835.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
APEX nuclease (apurinic/apyrimidinic endonuclease) 2
COORDINATES: polyA evidence [ECO:0006239]
DNA-(apurinic or apyrimidinic site) endonuclease 2
elongation factor 1, transcript variant X2
elongation factor 1, transcript variant X1
transcription elongation factor 1 homolog
uncharacterized LOC125487243, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC125487243, transcript variant X2
tartrate-resistant acid phosphatase type 5-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
tartrate-resistant acid phosphatase type 5-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
tartrate-resistant acid phosphatase type 5-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
tartrate-resistant acid phosphatase type 5-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
tartrate-resistant acid phosphatase type 5-like, transcript variant X1
tartrate-resistant acid phosphatase type 5-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
tartrate-resistant acid phosphatase type 5-like isoform X2
tartrate-resistant acid phosphatase type 5-like isoform X1
tartrate-resistant acid phosphatase type 5-like isoform X3
tartrate-resistant acid phosphatase type 5-like isoform X4
outer dynein arm docking complex subunit 3
coiled-coil domain-containing protein 151
uncharacterized LOC125487216, transcript variant X2
uncharacterized LOC125487216, transcript variant X4
uncharacterized LOC125487216, transcript variant X3
uncharacterized LOC125487216, transcript variant X1
tumor necrosis factor ligand superfamily member 14-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transmembrane emp24 domain-containing protein 1-like
uridine-cytidine kinase 2-A-like, transcript variant X4
uridine-cytidine kinase 2-A-like, transcript variant X1
uridine-cytidine kinase 2-A-like, transcript variant X2
uridine-cytidine kinase 2-A-like, transcript variant X3
uridine-cytidine kinase 2-like isoform X4
uridine-cytidine kinase 2-A-like isoform X1
uridine-cytidine kinase 2-A-like isoform X2
uridine-cytidine kinase 2-A-like isoform X3
queuine tRNA-ribosyltransferase 1, transcript variant X3
queuine tRNA-ribosyltransferase 1, transcript variant X6
queuine tRNA-ribosyltransferase 1, transcript variant X2
queuine tRNA-ribosyltransferase 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
queuine tRNA-ribosyltransferase 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
queuine tRNA-ribosyltransferase 1, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
queuine tRNA-ribosyltransferase 1, transcript variant X1
queuine tRNA-ribosyltransferase catalytic subunit 1
interleukin enhancer binding factor 3b, transcript variant X4
interleukin enhancer binding factor 3b, transcript variant X1
interleukin enhancer binding factor 3b, transcript variant X3
interleukin enhancer binding factor 3b, transcript variant X2
interleukin enhancer-binding factor 3 isoform X2
interleukin enhancer-binding factor 3 isoform X1
interleukin enhancer binding factor 3b, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
interleukin enhancer binding factor 3b, transcript variant X5
interleukin enhancer-binding factor 3 isoform X3
solute carrier family 44 member 2, transcript variant X1
choline transporter-like protein 2 isoform X1
solute carrier family 44 member 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
choline transporter-like protein 2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
jerky protein homolog, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
jerky protein homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
jerky protein homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
cAMP-specific 3',5'-cyclic phosphodiesterase 4A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins
general transcription factor IIF, polypeptide 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
general transcription factor IIF, polypeptide 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
general transcription factor IIF, polypeptide 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
general transcription factor IIF, polypeptide 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
YJU2 splicing factor homolog B, transcript variant X1
YJU2 splicing factor homolog B, transcript variant X3
YJU2 splicing factor homolog B, transcript variant X2
YJU2 splicing factor homolog B, transcript variant X4
general transcription factor IIF subunit 1
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7-like, transcript variant X1
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7-like, transcript variant X2
uncharacterized protein LOC109922377 isoform X1
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7-like isoform X2
F-box and WD repeat domain containing 9, transcript variant X9
F-box and WD repeat domain containing 9, transcript variant X1
F-box and WD repeat domain containing 9, transcript variant X6
F-box and WD repeat domain containing 9, transcript variant X8
F-box and WD repeat domain containing 9, transcript variant X7
F-box and WD repeat domain containing 9, transcript variant X10
F-box and WD repeat domain containing 9, transcript variant X3
F-box and WD repeat domain containing 9, transcript variant X2
F-box and WD repeat domain containing 9, transcript variant X4
F-box and WD repeat domain containing 9, transcript variant X5
WD repeat domain containing 83, transcript variant X2
WD repeat domain containing 83, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
interleukin 12 receptor, beta 2a, like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
interleukin 12 receptor, beta 2a, like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
interleukin 12 receptor, beta 2a, like isoform X1
interleukin 12 receptor, beta 2a, like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 18 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein LOC109924803 isoform X1
cAMP-specific 3',5'-cyclic phosphodiesterase 4B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
limbic system-associated membrane protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
intercellular adhesion molecule 1-like isoform X1
limbic system-associated membrane protein-like, transcript variant X2
limbic system-associated membrane protein-like isoform X2
intercellular adhesion molecule 1-like, transcript variant X1
intercellular adhesion molecule 1-like, transcript variant X2
intercellular adhesion molecule 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 211 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
intercellular adhesion molecule 1-like isoform X2
SPC24 component of NDC80 kinetochore complex, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
SPC24 component of NDC80 kinetochore complex, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
SPC24 component of NDC80 kinetochore complex, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
SPC24 component of NDC80 kinetochore complex, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
cysteine protease ATG4D-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
cysteine protease ATG4D-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
autophagy related 4D, cysteine peptidase a
ribonucleoprotein, PTB-binding 1, transcript variant X1
ribonucleoprotein, PTB-binding 1, transcript variant X2
ribonucleoprotein PTB-binding 1 isoform X2
ribonucleoprotein PTB-binding 1 isoform X1
tyrosine kinase 2, transcript variant X6
tyrosine kinase 2, transcript variant X1
tyrosine kinase 2, transcript variant X2
tyrosine kinase 2, transcript variant X5
tyrosine kinase 2, transcript variant X3
tyrosine kinase 2, transcript variant X4
non-receptor tyrosine-protein kinase TYK2
cell division cycle 37 homolog (S. cerevisiae), transcript variant X1
cell division cycle 37 homolog (S. cerevisiae), transcript variant X2
calcium-binding mitochondrial carrier protein SCaMC-1-like, transcript variant X1
calcium-binding mitochondrial carrier protein SCaMC-1-like, transcript variant X2
calcium-binding mitochondrial carrier protein SCaMC-1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ras-specific guanine nucleotide-releasing factor RalGPS1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ras-specific guanine nucleotide-releasing factor RalGPS1-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ras-specific guanine nucleotide-releasing factor RalGPS1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ras-specific guanine nucleotide-releasing factor RalGPS1-like, transcript variant X2
ras-specific guanine nucleotide-releasing factor RalGPS1-like
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
eukaryotic translation initiation factor 3, subunit G
eukaryotic translation initiation factor 3 subunit G
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
voltage-dependent P/Q-type calcium channel subunit alpha-1A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: immediate early response gene 5 protein
nucleus accumbens associated 1, BEN and BTB (POZ) domain containing b, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
nucleus accumbens associated 1, BEN and BTB (POZ) domain containing b, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
nucleus accumbens associated 1, BEN and BTB (POZ) domain containing b, transcript variant X1
nucleus accumbens-associated protein 1 isoform X2
nucleus accumbens-associated protein 1 isoform X1
tRNA methyltransferase 1, transcript variant X1
tRNA methyltransferase 1, transcript variant X2
tRNA (guanine(26)-N(2))-dimethyltransferase
afadin- and alpha-actinin-binding protein-like
caseinolytic mitochondrial matrix peptidase proteolytic subunit, transcript variant X1
caseinolytic mitochondrial matrix peptidase proteolytic subunit, transcript variant X2
ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X1
ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X2
DDB1 and CUL4 associated factor 15, transcript variant X1
DDB1 and CUL4 associated factor 15, transcript variant X2
DDB1- and CUL4-associated factor 15 isoform X1
DDB1- and CUL4-associated factor 15 isoform X2
DDB1 and CUL4 associated factor 15, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
DDB1 and CUL4 associated factor 15, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
DDB1- and CUL4-associated factor 15 isoform X5
DDB1 and CUL4 associated factor 15, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
DDB1 and CUL4 associated factor 15, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
DDB1- and CUL4-associated factor 15 isoform X3
DDB1- and CUL4-associated factor 15 isoform X4
DDB1 and CUL4 associated factor 15, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
DDB1- and CUL4-associated factor 15 isoform X6
AP2-interacting clathrin-endocytosis protein-like, transcript variant X1
AP2-interacting clathrin-endocytosis protein-like, transcript variant X2
AP2-interacting clathrin-endocytosis protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
dnaJ homolog subfamily B member 1, transcript variant X2
dnaJ homolog subfamily B member 1, transcript variant X1
PDZ domain-containing protein GIPC1-like
prostaglandin E2 receptor EP1 subtype-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 28 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
prostaglandin E2 receptor EP1 subtype-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
prostaglandin E2 receptor EP1 subtype-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
prostaglandin E2 receptor EP1 subtype-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
prostaglandin E2 receptor EP1 subtype-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
prostaglandin E2 receptor EP1 subtype-like
transitional endoplasmic reticulum ATPase-like
peptidoglycan recognition protein 6, transcript variant X2
peptidoglycan recognition protein 6, transcript variant X1
N-acetylmuramoyl-L-alanine amidase isoform X1
N-acetylmuramoyl-L-alanine amidase isoform X2
long-chain fatty acid transport protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
glutamate--cysteine ligase regulatory subunit-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate--cysteine ligase regulatory subunit-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate--cysteine ligase regulatory subunit-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
glutamate--cysteine ligase regulatory subunit-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
glutamate--cysteine ligase regulatory subunit-like isoform X4
glutamate--cysteine ligase regulatory subunit-like isoform X3
glutamate--cysteine ligase regulatory subunit-like isoform X2
glutamate--cysteine ligase regulatory subunit-like isoform X1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamine (anticodon CUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 11 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
nuclear receptor subfamily 5 group A member 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 106 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
breast cancer anti-estrogen resistance protein 3 homolog, transcript variant X1
breast cancer anti-estrogen resistance protein 3 homolog, transcript variant X2
breast cancer anti-estrogen resistance protein 3 homolog
neurogenic locus notch homolog protein 3
shiftless antiviral inhibitor of ribosomal frameshifting protein homolog, transcript variant X2
shiftless antiviral inhibitor of ribosomal frameshifting protein homolog, transcript variant X1
shiftless antiviral inhibitor of ribosomal frameshifting protein homolog isoform X2
shiftless antiviral inhibitor of ribosomal frameshifting protein homolog isoform X1
microfibril associated protein 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
microfibril associated protein 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
microfibril-associated glycoprotein 4 isoform X1
microfibril-associated glycoprotein 4 isoform X2
shiftless antiviral inhibitor of ribosomal frameshifting protein homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: shiftless antiviral inhibitor of ribosomal frameshifting protein homolog
RAB3D, member RAS oncogene family, a, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 102 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
RAB3D, member RAS oncogene family, a, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 102 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
tetraspanin-16-like, transcript variant X1
tetraspanin-16-like, transcript variant X2
tetraspanin-16-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
microtubule-associated serine/threonine-protein kinase 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
guided entry of tail-anchored proteins factor 3, ATPase
telomerase RNA component interacting RNase
cyclin-dependent kinase 4 inhibitor D-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
glutaryl-CoA dehydrogenase, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
fibrous sheath CABYR-binding protein-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: fibrous sheath CABYR-binding protein-like
phenylalanyl-tRNA synthetase subunit alpha
phenylalanine--tRNA ligase alpha subunit
UV excision repair protein RAD23 homolog A, transcript variant X1
UV excision repair protein RAD23 homolog A, transcript variant X2
UV excision repair protein RAD23 homolog A isoform X1
UV excision repair protein RAD23 homolog A isoform X2
tetratricopeptide repeat protein 39A, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
tetratricopeptide repeat protein 39A, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
tetratricopeptide repeat protein 39A isoform X1
tetratricopeptide repeat protein 39A isoform X2
growth arrest and DNA-damage-inducible, gamma interacting protein 1
growth arrest and DNA damage-inducible proteins-interacting protein 1
uncharacterized LOC125487245, transcript variant X1
uncharacterized protein LOC125487245 isoform X1
uncharacterized LOC125487245, transcript variant X2
uncharacterized protein LOC125487245 isoform X2
nuclear factor I/Xb, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 24 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
nuclear factor I/Xb, transcript variant X1
nuclear factor I/Xb, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 14 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
nuclear factor I/Xb, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 27 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
nuclear factor I/Xb, transcript variant X11
nuclear factor I/Xb, transcript variant X2
nuclear factor I/Xb, transcript variant X4
nuclear factor I/Xb, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
nuclear factor I/Xb, transcript variant X5
nuclear factor I/Xb, transcript variant X7
nuclear factor I/Xb, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 24 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
nuclear factor I/Xb, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 24 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 143 long SRA reads, 7 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
SWIM-type zinc finger 7 associated protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
erythropoietin receptor, transcript variant X2
erythropoietin receptor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
methylthioribose-1-phosphate isomerase 1
chromosome 38 C19orf53 homolog, transcript variant X2
chromosome 38 C19orf53 homolog, transcript variant X1
leydig cell tumor 10 kDa protein homolog isoform X1
leydig cell tumor 10 kDa protein homolog isoform X2
zinc finger SWIM domain-containing protein 4-like, transcript variant X2
zinc finger SWIM domain-containing protein 4-like, transcript variant X1
zinc finger SWIM domain-containing protein 4-like isoform X1
zinc finger SWIM domain-containing protein 4-like isoform X2
uncharacterized LOC125487241, transcript variant X1
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00020
uncharacterized LOC125487241, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
LOW QUALITY PROTEIN: protein PET100 homolog, mitochondrial
syntaxin binding protein 2, transcript variant X1
syntaxin binding protein 2, transcript variant X2
XPA binding protein 2, transcript variant X1
pre-mRNA-splicing factor SYF1 isoform X1
XPA binding protein 2, transcript variant X2
pre-mRNA-splicing factor SYF1 isoform X2
calmodulin regulated spectrin-associated protein family, member 3
calmodulin-regulated spectrin-associated protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
dedicator of cytokinesis protein 7-like, transcript variant X1
dedicator of cytokinesis protein 7-like, transcript variant X3
dedicator of cytokinesis protein 7-like, transcript variant X4
dedicator of cytokinesis protein 7-like, transcript variant X2
dedicator of cytokinesis protein 7-like, transcript variant X10
dedicator of cytokinesis protein 7-like, transcript variant X9
dedicator of cytokinesis protein 7-like, transcript variant X5
dedicator of cytokinesis protein 7-like, transcript variant X6
dedicator of cytokinesis protein 7-like, transcript variant X7
dedicator of cytokinesis protein 7-like, transcript variant X8
dedicator of cytokinesis protein 7-like, transcript variant X11
dedicator of cytokinesis protein 7-like isoform X1
dedicator of cytokinesis protein 7-like isoform X3
dedicator of cytokinesis protein 7-like isoform X4
dedicator of cytokinesis protein 7-like isoform X2
dedicator of cytokinesis protein 7-like isoform X10
dedicator of cytokinesis protein 7-like isoform X9
dedicator of cytokinesis protein 7-like isoform X5
dedicator of cytokinesis protein 7-like isoform X6
dedicator of cytokinesis protein 7-like isoform X7
dedicator of cytokinesis protein 7-like isoform X8
dedicator of cytokinesis protein 7-like isoform X11
KN motif and ankyrin repeat domain-containing protein 2-like
coactivator-associated arginine methyltransferase 1
histone-arginine methyltransferase CARM1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a, transcript variant X3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a, transcript variant X1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a, transcript variant X4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a, transcript variant X5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a, transcript variant X2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a, transcript variant X7
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a, transcript variant X6
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X6
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X7
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a, transcript variant X8
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X8
MHC class II regulatory factor RFX1-like, transcript variant X1
MHC class II regulatory factor RFX1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
MHC class II regulatory factor RFX1-like, transcript variant X3
MHC class II regulatory factor RFX1-like isoform X3
MHC class II regulatory factor RFX1-like isoform X2
MHC class II regulatory factor RFX1-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC125487268, transcript variant X2
uncharacterized LOC125487268, transcript variant X1
nuclear factor interleukin-3-regulated protein-like, transcript variant X3
nuclear factor interleukin-3-regulated protein-like, transcript variant X2
nuclear factor interleukin-3-regulated protein-like, transcript variant X1
nuclear factor interleukin-3-regulated protein-like
uncharacterized LOC125487259, transcript variant X1
uncharacterized LOC125487259, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC125487259, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
coiled-coil and C2 domain-containing protein 1A-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
coiled-coil and C2 domain-containing protein 1A-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
coiled-coil and C2 domain-containing protein 1A-like isoform X2
coiled-coil and C2 domain-containing protein 1A-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
coiled-coil and C2 domain-containing protein 1A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
adhesion G protein-coupled receptor E1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
adhesion G protein-coupled receptor E2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 65% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 24% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: adhesion G protein-coupled receptor E1-like
A-kinase anchor protein 8-like, transcript variant X1
A-kinase anchor protein 8-like, transcript variant X2
A-kinase anchor protein 8-like isoform X1
A-kinase anchor protein 8-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
volume-regulated anion channel subunit LRRC8C-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 7 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
adhesion G protein-coupled receptor E4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 long SRA reads, and 24% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
adhesion G protein-coupled receptor E1-like, transcript variant X1
adhesion G protein-coupled receptor E1-like, transcript variant X2
adhesion G protein-coupled receptor E1-like isoform X1
adhesion G protein-coupled receptor E1-like isoform X2
adhesion G protein-coupled receptor E3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
putative adhesion G protein-coupled receptor E4P
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
putative adhesion G protein-coupled receptor E4P, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
putative adhesion G protein-coupled receptor E4P, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
adhesion G protein-coupled receptor E2-like isoform X2
putative adhesion G protein-coupled receptor E4P isoform X1
adhesion G protein-coupled receptor E5-like
zona pellucida sperm-binding protein 3-like
zona pellucida sperm-binding protein 3-like, transcript variant X2
zona pellucida sperm-binding protein 3-like, transcript variant X3
zona pellucida sperm-binding protein 3-like, transcript variant X1
zona pellucida sperm-binding protein 3-like isoform X1
zona pellucida sperm-binding protein 3-like isoform X2
transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
adhesion G protein-coupled receptor L1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 3 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
anti-silencing function 1Bb histone chaperone
cAMP-dependent protein kinase catalytic subunit alpha-like, transcript variant X2
cAMP-dependent protein kinase catalytic subunit alpha-like isoform X2
cAMP-dependent protein kinase catalytic subunit alpha-like, transcript variant X1
cAMP-dependent protein kinase catalytic subunit alpha-like isoform X1
cAMP-dependent protein kinase catalytic subunit alpha-like, transcript variant X3
cAMP-dependent protein kinase catalytic subunit alpha-like isoform X3
cAMP-dependent protein kinase catalytic subunit alpha-like, transcript variant X4
cAMP-dependent protein kinase catalytic subunit alpha-like isoform X4
transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
protein Niban 1-like, transcript variant X3
protein Niban 1-like, transcript variant X2
protein Niban 1-like, transcript variant X1
collagen beta(1-O)galactosyltransferase 1b, transcript variant X1
collagen beta(1-O)galactosyltransferase 1b, transcript variant X2
collagen beta(1-O)galactosyltransferase 1b, transcript variant X3
very-long-chain enoyl-CoA reductase, transcript variant X2
very-long-chain enoyl-CoA reductase isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
very-long-chain enoyl-CoA reductase, transcript variant X1
very-long-chain enoyl-CoA reductase isoform X1
NADH:ubiquinone oxidoreductase subunit B7
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
trafficking protein particle complex subunit 5, transcript variant X2
trafficking protein particle complex subunit 5, transcript variant X1
trafficking protein particle complex subunit 5
mucolipin TRP cation channel 1a, transcript variant X1
mucolipin TRP cation channel 1a, transcript variant X2
lysophosphatidic acid receptor 1-like, transcript variant X1
lysophosphatidic acid receptor 1-like isoform X1
lysophosphatidic acid receptor 1-like, transcript variant X2
lysophosphatidic acid receptor 1-like, transcript variant X3
lysophosphatidic acid receptor 1-like isoform X2
pre-B-cell leukemia transcription factor 4, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
pre-B-cell leukemia transcription factor 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
pre-B-cell leukemia transcription factor 4, transcript variant X2
pre-B-cell leukemia transcription factor 4, transcript variant X5
pre-B-cell leukemia transcription factor 4, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
pre-B-cell leukemia transcription factor 4 isoform X1
pre-B-cell leukemia transcription factor 4 isoform X4
pre-B-cell leukemia transcription factor 4 isoform X2
pre-B-cell leukemia transcription factor 4 isoform X5
pre-B-cell leukemia transcription factor 4 isoform X3
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
pre-B-cell leukemia transcription factor 1-like
kinetochore-associated protein DSN1 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
coiled-coil-helix-coiled-coil-helix domain-containing protein 5, transcript variant X2
coiled-coil-helix-coiled-coil-helix domain-containing protein 5 isoform X2
coiled-coil-helix-coiled-coil-helix domain-containing protein 5, transcript variant X3
coiled-coil-helix-coiled-coil-helix domain-containing protein 5 isoform X3
coiled-coil-helix-coiled-coil-helix domain-containing protein 5, transcript variant X1
coiled-coil-helix-coiled-coil-helix domain-containing protein 5, transcript variant X4
uncharacterized protein LOC109911842 isoform X4
coiled-coil-helix-coiled-coil-helix domain-containing protein 5 isoform X1
patatin-like phospholipase domain containing 6, transcript variant X2
patatin-like phospholipase domain containing 6, transcript variant X3
patatin-like phospholipase domain-containing protein 6 isoform X2
patatin-like phospholipase domain-containing protein 6 isoform X3
patatin-like phospholipase domain containing 6, transcript variant X1
patatin-like phospholipase domain-containing protein 6 isoform X1
ultra-long-chain fatty acid omega-hydroxylase, transcript variant X2
ultra-long-chain fatty acid omega-hydroxylase, transcript variant X1
ultra-long-chain fatty acid omega-hydroxylase isoform X2
ultra-long-chain fatty acid omega-hydroxylase isoform X1
rho GTPase-activating protein SYDE1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
LIM homeobox transcription factor 1, alpha-like
LIM homeobox transcription factor 1-alpha
C-type lectin domain family 10 member A-like, transcript variant X2
C-type lectin domain family 10 member A-like, transcript variant X1
C-type lectin domain family 10 member A-like isoform X2
asialoglycoprotein receptor 1-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 40% coverage of the annotated genomic feature by RNAseq alignments
hepatic lectin-like, transcript variant X2
hepatic lectin-like, transcript variant X1
uncharacterized protein LOC125487237 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
volume-regulated anion channel subunit LRRC8C-like, transcript variant X1
volume-regulated anion channel subunit LRRC8C-like, transcript variant X3
volume-regulated anion channel subunit LRRC8C-like, transcript variant X2
volume-regulated anion channel subunit LRRC8C-like isoform X1
volume-regulated anion channel subunit LRRC8C-like, transcript variant X5
volume-regulated anion channel subunit LRRC8C-like, transcript variant X4
volume-regulated anion channel subunit LRRC8C-like isoform X2
volume-regulated anion channel subunit LRRC8D-like, transcript variant X1
volume-regulated anion channel subunit LRRC8D-like, transcript variant X2
volume-regulated anion channel subunit LRRC8D-like
mitogen-activated protein kinase kinase 7
dual specificity mitogen-activated protein kinase kinase 7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns