Rhincodon typus isolate 14 chromosome 36, sRhiTyp1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
REFSEQ INFORMATION: The reference sequence is identical to\nCM038833.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: cephalotocin receptor 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: polyA evidence [ECO:0006239]
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
probable E3 ubiquitin-protein ligase HERC1
F-box and leucine-rich repeat protein 22
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ubiquitin specific peptidase 3, transcript variant X1
ubiquitin specific peptidase 3, transcript variant X3
ubiquitin specific peptidase 3, transcript variant X6
ubiquitin specific peptidase 3, transcript variant X2
ubiquitin specific peptidase 3, transcript variant X4
ubiquitin specific peptidase 3, transcript variant X5
ubiquitin carboxyl-terminal hydrolase 3 isoform X3
ubiquitin carboxyl-terminal hydrolase 3 isoform X1
ubiquitin carboxyl-terminal hydrolase 3 isoform X2
ubiquitin carboxyl-terminal hydrolase 3 isoform X4
ubiquitin specific peptidase 3, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 3 isoform X6
ubiquitin carboxyl-terminal hydrolase 3 isoform X5
ubiquitin specific peptidase 3, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 3 isoform X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
calcium and integrin binding family member 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
calcium and integrin-binding family member 2
leucine rich repeat containing 61, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
leucine rich repeat containing 61, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
leucine-rich repeat-containing protein 61 isoform X1
leucine-rich repeat-containing protein 61 isoform X2
isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha
isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
uncharacterized LOC109936168, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
uncharacterized protein LOC109936168 isoform X1
uncharacterized LOC109936168, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized protein LOC109936168 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
iron-responsive element-binding protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
WD repeat domain 61, transcript variant X2
WD repeat domain 61, transcript variant X1
WD repeat-containing protein 61 isoform X2
WD repeat-containing protein 61 isoform X1
cellular retinoic acid binding protein 1a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
cellular retinoic acid-binding protein 1a
solute carrier family 25 member 44, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
solute carrier family 25 member 44 isoform X2
solute carrier family 25 member 44, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
solute carrier family 25 member 44 isoform X1
iron-responsive element binding protein 2
iron-responsive element-binding protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
hydroxylysine kinase-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
hydroxylysine kinase-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
hydroxylysine kinase-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
hydroxylysine kinase-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
hydroxylysine kinase-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
proteasome 20S subunit alpha 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 334 long SRA reads, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
proteasome 20S subunit alpha 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 261 long SRA reads, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00377
deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial
solute carrier family 12 member 1, transcript variant X5
solute carrier family 12 member 1, transcript variant X2
solute carrier family 12 member 1, transcript variant X6
solute carrier family 12 member 1, transcript variant X3
solute carrier family 12 member 1, transcript variant X4
solute carrier family 12 member 1, transcript variant X1
solute carrier family 12 member 1 isoform X5
solute carrier family 12 member 1 isoform X2
solute carrier family 12 member 1 isoform X6
solute carrier family 12 member 1 isoform X3
solute carrier family 12 member 1 isoform X4
solute carrier family 12 member 1 isoform X1
solute carrier family 12 member 1, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
GRAM domain containing 2Aa, transcript variant X2
GRAM domain containing 2Aa, transcript variant X1
GRAM domain containing 2Aa, transcript variant X3
GRAM domain-containing protein 2A isoform X1
GRAM domain-containing protein 2A isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
zinc finger protein 609b, transcript variant X1
zinc finger protein 609b, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
zinc finger protein 609, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
zinc finger protein 609, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
protein tyrosine phosphatase non-receptor type 9a
tyrosine-protein phosphatase non-receptor type 9
SIN3 transcription regulator family member Aa, transcript variant X3
SIN3 transcription regulator family member Aa, transcript variant X5
SIN3 transcription regulator family member Aa, transcript variant X2
SIN3 transcription regulator family member Aa, transcript variant X7
SIN3 transcription regulator family member Aa, transcript variant X6
SIN3 transcription regulator family member Aa, transcript variant X4
SIN3 transcription regulator family member Aa, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 64% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
SIN3 transcription regulator family member Aa, transcript variant X9
SIN3 transcription regulator family member Aa, transcript variant X8
SIN3 transcription regulator family member Aa
sorting nexin-27-like, transcript variant X1
sorting nexin-27-like, transcript variant X2
adaptor related protein complex 3 subunit beta 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
cytoplasmic polyadenylation element-binding protein 1, transcript variant X2
cytoplasmic polyadenylation element-binding protein 1, transcript variant X6
cytoplasmic polyadenylation element-binding protein 1 isoform X2
cytoplasmic polyadenylation element-binding protein 1, transcript variant X1
cytoplasmic polyadenylation element-binding protein 1, transcript variant X3
cytoplasmic polyadenylation element-binding protein 1, transcript variant X7
cytoplasmic polyadenylation element-binding protein 1, transcript variant X4
cytoplasmic polyadenylation element-binding protein 1, transcript variant X5
cytoplasmic polyadenylation element-binding protein 1 isoform X1
cytoplasmic polyadenylation element-binding protein 1 isoform X3
cytoplasmic polyadenylation element-binding protein 1 isoform X4
synaptic vesicle glycoprotein 2, transcript variant X2
synaptic vesicle glycoprotein 2, transcript variant X1
synaptic vesicle glycoprotein 2C isoform X2
synaptic vesicle glycoprotein 2C isoform X1
transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
casein kinase I-like, transcript variant X3
casein kinase I-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
casein kinase I-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
cholesterol 25-hydroxylase-like protein 1, member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein LOC100034462 homolog, transcript variant X1
uncharacterized protein si:dkey-24l11.2 isoform X1
uncharacterized protein LOC100034462 homolog, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized protein LOC100034462 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized protein si:dkey-24l11.2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 154 long SRA reads, 3 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
mucosa-associated lymphoid tissue lymphoma translocation protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcription initiation factor IIA subunit 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
interactor of little elongator complex ELL subunit 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
RAR-related orphan receptor A, paralog a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
maestro heat-like repeat-containing protein family member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
intermembrane lipid transfer protein VPS13C
intermembrane lipid transfer protein VPS13C-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
C2 calcium-dependent domain-containing protein 4C-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2-like
RNA binding protein, mRNA processing factor 2, transcript variant X1
RNA binding protein, mRNA processing factor 2, transcript variant X3
RNA binding protein, mRNA processing factor 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
RNA-binding protein with multiple splicing 2 isoform X1
RNA-binding protein with multiple splicing 2 isoform X3
RNA-binding protein with multiple splicing 2 isoform X2
nei-like DNA glycosylase 1, transcript variant X1
nei-like DNA glycosylase 1, transcript variant X2
nei-like DNA glycosylase 1, transcript variant X3
nei-like DNA glycosylase 1, transcript variant X4
zinc finger CCCH domain-containing protein 10-like
uncharacterized protein si:ch211-217k17.9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
phosphopantothenoylcysteine decarboxylase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 27 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00004
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 69% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
secretory carrier-associated membrane protein 5-like, transcript variant X4
secretory carrier-associated membrane protein 5-like, transcript variant X6
secretory carrier-associated membrane protein 5-like, transcript variant X5
secretory carrier-associated membrane protein 5-like, transcript variant X3
secretory carrier-associated membrane protein 5-like, transcript variant X2
secretory carrier-associated membrane protein 5-like, transcript variant X1
secretory carrier-associated membrane protein 5-like, transcript variant X7
secretory carrier-associated membrane protein 5-like
REC114 meiotic recombination protein, transcript variant X2
REC114 meiotic recombination protein, transcript variant X1
meiotic recombination protein REC114 isoform X2
meiotic recombination protein REC114 isoform X1
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
protein mono-ADP-ribosyltransferase PARP6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00020
family with sequence similarity 219 member B, transcript variant X4
family with sequence similarity 219 member B, transcript variant X3
family with sequence similarity 219 member B, transcript variant X2
family with sequence similarity 219 member B, transcript variant X1
ribonuclease P protein subunit p25-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
AT-rich interactive domain-containing protein 3B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments
enhancer of mRNA decapping 3 homolog (S. cerevisiae), transcript variant X2
enhancer of mRNA decapping 3 homolog (S. cerevisiae), transcript variant X1
enhancer of mRNA-decapping protein 3 isoform X2
enhancer of mRNA-decapping protein 3 isoform X1
collagen and calcium-binding EGF domain-containing protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
C-terminal Src kinase, transcript variant X3
C-terminal Src kinase, transcript variant X4
C-terminal Src kinase, transcript variant X1
C-terminal Src kinase, transcript variant X2
C-terminal Src kinase, transcript variant X6
C-terminal Src kinase, transcript variant X5
protein ERGIC-53-like, transcript variant X2
protein ERGIC-53-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
sorbitol dehydrogenase-like, transcript variant X1
sorbitol dehydrogenase-like, transcript variant X6
sorbitol dehydrogenase-like, transcript variant X3
sorbitol dehydrogenase-like, transcript variant X2
sorbitol dehydrogenase-like, transcript variant X5
sorbitol dehydrogenase-like, transcript variant X4
dual oxidase 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
dual oxidase 2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
cholesterol side-chain cleavage enzyme, mitochondrial, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
cholesterol side-chain cleavage enzyme, mitochondrial isoform X1
cholesterol side-chain cleavage enzyme, mitochondrial, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
cholesterol side-chain cleavage enzyme, mitochondrial isoform X2
coiled-coil domain containing 33, transcript variant X2
coiled-coil domain containing 33, transcript variant X1
coiled-coil domain-containing protein 33
signaling receptor and transporter of retinol STRA6, transcript variant X1
signaling receptor and transporter of retinol STRA6, transcript variant X3
signaling receptor and transporter of retinol STRA6, transcript variant X2
receptor for retinol uptake stra6 isoform X1
receptor for retinol uptake stra6 isoform X2
immunoglobulin superfamily containing leucine-rich repeat 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
immunoglobulin superfamily containing leucine-rich repeat protein 2
stomatin (EPB72)-like 1, transcript variant X3
stomatin (EPB72)-like 1, transcript variant X2
stomatin (EPB72)-like 1, transcript variant X1
secretory carrier-associated membrane protein 2-like
unc-51 like kinase 3, transcript variant X1
unc-51 like kinase 3, transcript variant X2
unc-51 like kinase 3, transcript variant X3
serine/threonine-protein kinase ULK3 isoform X1
serine/threonine-protein kinase ULK3 isoform X3
serine/threonine-protein kinase ULK3 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
pro-neuregulin-4, membrane-bound isoform-like, transcript variant X1
pro-neuregulin-4, membrane-bound isoform-like, transcript variant X2
pro-neuregulin-4, membrane-bound isoform-like isoform X1
pro-neuregulin-4, membrane-bound isoform-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
electron transfer flavoprotein subunit alpha
electron transfer flavoprotein subunit alpha, mitochondrial
insulin gene enhancer protein ISL-2-like, transcript variant X2
insulin gene enhancer protein ISL-2-like, transcript variant X1
insulin gene enhancer protein ISL-2-like isoform X1
insulin gene enhancer protein ISL-1-like isoform X2
S phase cyclin A-associated protein in the endoplasmic reticulum-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 77% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
proline-serine-threonine phosphatase interacting protein 1a, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
proline-serine-threonine phosphatase-interacting protein 1a isoform X1
proline-serine-threonine phosphatase-interacting protein 1a isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
high mobility group 20A, transcript variant X5
high mobility group 20A, transcript variant X3
high mobility group 20A, transcript variant X2
high mobility group 20A, transcript variant X8
high mobility group 20A, transcript variant X1
high mobility group 20A, transcript variant X9
high mobility group 20A, transcript variant X7
high mobility group 20A, transcript variant X4
high mobility group 20A, transcript variant X10
high mobility group protein 20A isoform X5
high mobility group protein 20A isoform X3
high mobility group protein 20A isoform X4
high mobility group protein 20A isoform X1
high mobility group protein 20A isoform X6
high mobility group 20A, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
high mobility group 20A, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
high mobility group protein 20A isoform X7
high mobility group protein 20A isoform X2
pseudopodium-enriched atypical kinase 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudopodium-enriched atypical kinase 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudopodium-enriched atypical kinase 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
inactive tyrosine-protein kinase PEAK1 isoform X1
inactive tyrosine-protein kinase PEAK1 isoform X3
inactive tyrosine-protein kinase PEAK1 isoform X2
uncharacterized protein si:ch211-113p18.3
ubiquitin-like protein 7, transcript variant X1
ubiquitin-like protein 7, transcript variant X2
ubiquitin-like protein 7, transcript variant X3
neuronal acetylcholine receptor subunit alpha-3-like, transcript variant X2
neuronal acetylcholine receptor subunit alpha-3-like, transcript variant X1
neuronal acetylcholine receptor subunit alpha-3-like, transcript variant X3
neuronal acetylcholine receptor subunit alpha-3-like isoform X2
neuronal acetylcholine receptor subunit alpha-3-like isoform X1
neuronal acetylcholine receptor subunit alpha-3-like isoform X3
neuronal acetylcholine receptor subunit beta-4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 129 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized protein LOC791139 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized protein LOC791139 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
SH2 domain-containing adapter protein B isoform X2
SH2 domain-containing adapter protein B isoform X1
insulin-like growth factor 1a receptor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
insulin-like growth factor 1a receptor, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
insulin-like growth factor 1a receptor isoform X1
insulin-like growth factor 1a receptor isoform X2
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
tetratricopeptide repeat domain 23, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
tetratricopeptide repeat protein 23 isoform X4
tetratricopeptide repeat domain 23, transcript variant X1
tetratricopeptide repeat protein 23 isoform X1
tetratricopeptide repeat domain 23, transcript variant X2
tetratricopeptide repeat domain 23, transcript variant X3
tetratricopeptide repeat protein 23 isoform X2
tetratricopeptide repeat protein 23 isoform X3
tetratricopeptide repeat domain 23, transcript variant X5
tetratricopeptide repeat protein 23 isoform X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins
cocaine- and amphetamine-regulated transcript protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
tubulin, gamma complex associated protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
LOW QUALITY PROTEIN: microtubule-associated protein 1A-like
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like isoform X7
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like isoform X6
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like isoform X5
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like isoform X2
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like isoform X1
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like isoform X8
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like isoform X4
inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
creatine kinase U-type, mitochondrial-like, transcript variant X2
creatine kinase U-type, mitochondrial-like isoform X2
creatine kinase U-type, mitochondrial-like, transcript variant X3
creatine kinase U-type, mitochondrial-like, transcript variant X1
creatine kinase U-type, mitochondrial-like isoform X1
creatine kinase U-type, mitochondrial-like, transcript variant X4
creatine kinase U-type, mitochondrial-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
vacuolar protein sorting-associated protein 33B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: protein unc-45 homolog A-like
VPS33B late endosome and lysosome associated
vacuolar protein sorting-associated protein 33B
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
tubulin tyrosine ligase-like family, member 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
calcium and integrin-binding protein 1, transcript variant X2
calcium and integrin-binding protein 1, transcript variant X1
calcium and integrin-binding protein 1, transcript variant X4
calcium and integrin-binding protein 1, transcript variant X3
RCC1 domain containing 1, transcript variant X3
RCC1 domain containing 1, transcript variant X6
RCC1 domain containing 1, transcript variant X2
RCC1 domain containing 1, transcript variant X1
RCC1 domain containing 1, transcript variant X4
RCC1 domain containing 1, transcript variant X5
RCC1 domain-containing protein 1 isoform X3
RCC1 domain-containing protein 1 isoform X6
RCC1 domain-containing protein 1 isoform X2
RCC1 domain-containing protein 1 isoform X1
RCC1 domain-containing protein 1 isoform X4
RCC1 domain-containing protein 1 isoform X5
protein shisa-like-1, transcript variant X1
protein shisa-like-1, transcript variant X2
mannosidase, alpha, class 2A, member 2, transcript variant X3
mannosidase, alpha, class 2A, member 2, transcript variant X5
mannosidase, alpha, class 2A, member 2, transcript variant X1
mannosidase, alpha, class 2A, member 2, transcript variant X2
mannosidase, alpha, class 2A, member 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
furin (paired basic amino acid cleaving enzyme) a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
microfibrillar-associated protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 69% coverage of the annotated genomic feature by RNAseq alignments
CREB regulated transcription coactivator 3, transcript variant X2
CREB regulated transcription coactivator 3, transcript variant X1
CREB regulated transcription coactivator 3, transcript variant X3
CREB-regulated transcription coactivator 3 isoform X2
CREB-regulated transcription coactivator 3 isoform X3
CREB-regulated transcription coactivator 3 isoform X1
IQ motif containing GTPase activating protein 1
ras GTPase-activating-like protein IQGAP1
SUMO peptidase family member, NEDD8 specific, transcript variant X1
SUMO peptidase family member, NEDD8 specific, transcript variant X2
SUMO peptidase family member, NEDD8 specific, transcript variant X3
nuclear receptor subfamily 2, group E, member 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
leucine rich repeat and Ig domain containing 1a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
sorting nexin-24-like, transcript variant X2
sorting nexin-24-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 86% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00012
transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
OTU deubiquitinase 7A, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
OTU deubiquitinase 7A, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transient receptor potential cation channel, subfamily M, member 1a, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transient receptor potential cation channel, subfamily M, member 1a, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transient receptor potential cation channel, subfamily M, member 1a, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transient receptor potential cation channel, subfamily M, member 1a, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transient receptor potential cation channel subfamily M member 1a isoform X2
transient receptor potential cation channel subfamily M member 1a isoform X4
transient receptor potential cation channel subfamily M member 1a isoform X1
transient receptor potential cation channel subfamily M member 1a isoform X3
myotubularin related protein 10, transcript variant X1
myotubularin related protein 10, transcript variant X2
myotubularin-related protein 10 isoform X1
myotubularin-related protein 10 isoform X2
FANCD2 and FANCI associated nuclease 1, transcript variant X2
FANCD2 and FANCI associated nuclease 1, transcript variant X1
fanconi-associated nuclease 1 isoform X2
fanconi-associated nuclease 1 isoform X1
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
U3 small nucleolar ribonucleoprotein protein MPP10
amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
amyloid-beta A4 precursor protein-binding family A member 2 isoform X2
family with sequence similarity 189 member A1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
tight junction protein 1a, transcript variant X7
tight junction protein 1a, transcript variant X6
tight junction protein 1a, transcript variant X5
tight junction protein 1a, transcript variant X4
tight junction protein 1a, transcript variant X2
tight junction protein 1a, transcript variant X1
tight junction protein 1a, transcript variant X3
threonine--tRNA ligase 2, cytoplasmic-like, transcript variant X3
threonine--tRNA ligase 2, cytoplasmic-like isoform X3
threonine--tRNA ligase 2, cytoplasmic-like, transcript variant X1
threonine--tRNA ligase 2, cytoplasmic-like, transcript variant X2
La ribonucleoprotein 6, translational regulator a
leucine-rich repeat-containing protein 49, transcript variant X1
leucine-rich repeat-containing protein 49, transcript variant X2
leucine-rich repeat-containing protein 49 isoform X1
leucine-rich repeat-containing protein 49 isoform X2