Rhincodon typus isolate 14 chromosome 34, sRhiTyp1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
REFSEQ INFORMATION: The reference sequence is identical to\nCM038831.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
gastrula zinc finger protein XlCGF8.2DB-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
immunoglobulin superfamily member 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments
zinc finger protein 239-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
zinc finger protein 239-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
zinc finger protein 239-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger protein 239-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
BMS1 ribosome biogenesis factor, transcript variant X3
COORDINATES: polyA evidence [ECO:0006239]
BMS1 ribosome biogenesis factor, transcript variant X2
BMS1 ribosome biogenesis factor, transcript variant X4
BMS1 ribosome biogenesis factor, transcript variant X1
ribosome biogenesis protein BMS1 homolog isoform X1
ribosome biogenesis protein BMS1 homolog isoform X2
protein FAM149B1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein FAM149B1-like, transcript variant X2
tetraspanin-5-like, transcript variant X1
tetraspanin-5-like, transcript variant X2
leucine-rich repeat-containing protein 20
DnaJ (Hsp40) homolog, subfamily C, member 9
nuclear factor NF-kappa-B p100 subunit-like
leucine-rich repeat-containing protein 20-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transforming growth factor beta regulator 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transforming growth factor beta regulator 1
arachidonate 5-lipoxygenase a, transcript variant X1
arachidonate 5-lipoxygenase a, transcript variant X2
polyunsaturated fatty acid 5-lipoxygenase isoform X1
polyunsaturated fatty acid 5-lipoxygenase isoform X2
phosphoinositide-3-kinase adaptor protein 1
phosphoinositide 3-kinase adapter protein 1
serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, transcript variant X1
serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, transcript variant X3
serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1
serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X3
serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, transcript variant X2
serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X2
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF01229
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
sorbin and SH3 domain-containing protein 1-like
PDZ and LIM domain 1 (elfin), transcript variant X2
PDZ and LIM domain 1 (elfin), transcript variant X1
PDZ and LIM domain 1 (elfin), transcript variant X3
paired box protein Pax-2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
paired box protein Pax-2, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
paired box protein Pax-2, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
paired box protein Pax-2, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
paired box protein Pax-2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
paired box protein Pax-2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
paired box protein Pax-2, transcript variant X1
paired box protein Pax-2, transcript variant X4
uncharacterized LOC125486876, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC125486876, transcript variant X1
uncharacterized LOC125486880, transcript variant X1
uncharacterized LOC125486880, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
growth hormone inducible transmembrane protein
growth hormone-inducible transmembrane protein
uncharacterized protein LOC555816 homolog
uncharacterized protein si:ch1073-126c3.2
uncharacterized marchf8, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized marchf8, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized protein marchf8 isoform X2
uncharacterized protein marchf8 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 137 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
bone morphogenetic protein receptor, type IAa
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
synuclein, gamma a, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
synuclein, gamma a, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
synuclein, gamma a, transcript variant X3
glutamate dehydrogenase 1, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
shieldin complex subunit 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
shieldin complex subunit 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
shieldin complex subunit 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
shieldin complex subunit 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
shieldin complex subunit 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
translocase of inner mitochondrial membrane 23 homolog a (yeast), transcript variant X1
translocase of inner mitochondrial membrane 23 homolog a (yeast), transcript variant X2
mitochondrial import inner membrane translocase subunit Tim23 isoform X1
mitochondrial import inner membrane translocase subunit Tim23 isoform X2
CUE domain-containing protein 2-A, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
CUE domain-containing protein 2-A, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
CUE domain-containing protein 2-A, transcript variant X3
CUE domain-containing protein 2-A, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
CUE domain-containing protein 2-A, transcript variant X4
L-threonine ammonia-lyase, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
L-threonine ammonia-lyase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
L-threonine ammonia-lyase, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
L-threonine dehydratase catabolic TdcB isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
hypoxia-inducible factor 1-alpha inhibitor-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
NADH:ubiquinone oxidoreductase subunit B8, transcript variant X2
NADH:ubiquinone oxidoreductase subunit B8, transcript variant X1
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial isoform X1
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial isoform X2
SEC31 homolog B, COPII coat complex component, transcript variant X1
SEC31 homolog B, COPII coat complex component, transcript variant X4
SEC31 homolog B, COPII coat complex component, transcript variant X3
SEC31 homolog B, COPII coat complex component, transcript variant X5
SEC31 homolog B, COPII coat complex component, transcript variant X2
protein transport protein Sec31A isoform X1
protein transport protein Sec31A isoform X3
protein transport protein Sec31A isoform X2
protein transport protein Sec31A isoform X4
wingless-type MMTV integration site family, member 8b
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
stearoyl-CoA desaturase (delta-9-desaturase)
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transmembrane protein 150A-like, transcript variant X1
transmembrane protein 150A-like, transcript variant X2
transmembrane protein 150A-like isoform X1
transmembrane protein 150A-like isoform X2
uncharacterized protein LOC796266 homolog
eukaryotic translation initiation factor 4E-binding protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 long SRA reads, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 long SRA reads, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
A disintegrin and metalloproteinase with thrombospondin motifs 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
steroidogenic acute regulatory protein-like
microsomal triglyceride transfer protein large subunit-like, transcript variant X2
microsomal triglyceride transfer protein large subunit-like, transcript variant X1
microsomal triglyceride transfer protein large subunit-like, transcript variant X3
microsomal triglyceride transfer protein-like isoform X1
microsomal triglyceride transfer protein large subunit-like isoform X2
microsomal triglyceride transfer protein large subunit-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pyroglutamylated RF-amide peptide receptor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
progestin and adipoQ receptor family member 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial-like
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
growth/differentiation factor 10, transcript variant X1
growth/differentiation factor 10, transcript variant X2
growth/differentiation factor 10 isoform X1
growth/differentiation factor 10 isoform X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
tyrosine-protein phosphatase non-receptor type 20-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
tyrosine-protein phosphatase non-receptor type 13-like
FERM and PDZ domain-containing protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75% coverage of the annotated genomic feature by RNAseq alignments
mitogen-activated protein kinase 8a, transcript variant X2
mitogen-activated protein kinase 8a, transcript variant X1
mitogen-activated protein kinase 8a, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
mitogen-activated protein kinase 8 isoform X2
mitogen-activated protein kinase 8 isoform X1
mitogen-activated protein kinase 8 isoform X3
rho GTPase-activating protein 22-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
rho GTPase-activating protein 22-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
rho GTPase-activating protein 22-like isoform X2
rho GTPase-activating protein 22-like isoform X1
probable protein S-acyltransferase 23, transcript variant X3
probable protein S-acyltransferase 23, transcript variant X1
probable protein S-acyltransferase 23, transcript variant X2
probable protein S-acyltransferase 23 isoform X3
probable protein S-acyltransferase 23 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
WD repeat- and FYVE domain-containing protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
leucine-rich repeat-containing protein 18
V-set and transmembrane domain containing 4a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
V-set and transmembrane domain-containing protein 4a
transmembrane protein 273-like, transcript variant X1
transmembrane protein 273-like, transcript variant X2
transmembrane protein 273-like isoform X1
transmembrane protein 273-like isoform X2
cardiac-enriched FHL2-interacting protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
excision repair cross-complementation group 6, transcript variant X3
excision repair cross-complementation group 6, transcript variant X1
excision repair cross-complementation group 6, transcript variant X2
excision repair cross-complementation group 6, transcript variant X4
DNA excision repair protein ERCC-6 isoform X2
DNA excision repair protein ERCC-6 isoform X1
DNA excision repair protein ERCC-6 isoform X3
chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
transmembrane protein 72, transcript variant X1
transmembrane protein 72, transcript variant X2
Ras association domain family member 4a, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Ras association domain family member 4a, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ras association domain-containing protein 4a isoform X2
ras association domain-containing protein 4a isoform X1
polyamine oxidase, transcript variant X2
polyamine oxidase, transcript variant X1
polyamine oxidase, transcript variant X3
peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X2
peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1
peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X3
mitochondrial ribosome-associated GTPase 1, transcript variant X1
mitochondrial ribosome-associated GTPase 1, transcript variant X2
mitochondrial ribosome-associated GTPase 1 isoform X1
mitochondrial ribosome-associated GTPase 1 isoform X2
enoyl CoA hydratase, short chain, 1, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
uncharacterized protein LOC368914 homolog
uncharacterized protein si:ch211-217g15.3
calcyon neuron-specific vesicular protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
tubulin, gamma complex associated protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 21 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
disintegrin and metalloproteinase domain-containing protein 8a
catechol-O-methyltransferase domain containing 1
catechol O-methyltransferase domain-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 117 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: neurofilament medium polypeptide-like
voltage-dependent anion-selective channel protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
dual specificity protein phosphatase 13-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
sterile alpha motif domain containing 8, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
sterile alpha motif domain containing 8, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
sphingomyelin synthase-related protein 1 isoform X1
sphingomyelin synthase-related protein 1 isoform X2
tissue-type plasminogen activator-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
tissue-type plasminogen activator-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
tissue-type plasminogen activator-like isoform X2
tissue-type plasminogen activator-like isoform X1
component of inhibitor of nuclear factor kappa B kinase complex
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
inhibitor of nuclear factor kappa-B kinase subunit alpha
elongation of very long chain fatty acids protein 5-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
elongation of very long chain fatty acids protein 5-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
elongation of very long chain fatty acids protein 5-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
elongation of very long chain fatty acids protein 5-like, transcript variant X3
elongation of very long chain fatty acids protein 5-like, transcript variant X5
elongation of very long chain fatty acids protein 5-like
zinc finger protein 503, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
zinc finger protein 503, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
zinc finger protein 503, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger protein 503, transcript variant X4
zinc finger protein 503, transcript variant X7
zinc finger protein 503, transcript variant X6
zinc finger protein 503, transcript variant X2
leucine rich melanocyte differentiation associated, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
leucine-rich melanocyte differentiation-associated protein isoform X1
leucine rich melanocyte differentiation associated, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
leucine-rich melanocyte differentiation-associated protein isoform X2
calcium-activated potassium channel subunit alpha-1-like, transcript variant X2
calcium-activated potassium channel subunit alpha-1-like, transcript variant X1
calcium-activated potassium channel subunit alpha-1-like isoform X1
calcium-activated potassium channel subunit alpha-1-like isoform X2
calcium-activated potassium channel subunit alpha-1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
elongation of very long chain fatty acids protein 6-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
elongation of very long chain fatty acids protein 6-like isoform X1
elongation of very long chain fatty acids protein 6-like, transcript variant X2
elongation of very long chain fatty acids protein 6-like isoform X2
apoptosis inducing factor mitochondria associated 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
oxoglutarate dehydrogenase L, transcript variant X2
oxoglutarate dehydrogenase L, transcript variant X1
2-oxoglutarate dehydrogenase-like, mitochondrial isoform X2
2-oxoglutarate dehydrogenase-like, mitochondrial isoform X1
poly (ADP-ribose) glycohydrolase a, transcript variant X4
poly (ADP-ribose) glycohydrolase a, transcript variant X3
poly (ADP-ribose) glycohydrolase a, transcript variant X2
poly (ADP-ribose) glycohydrolase a, transcript variant X1
poly (ADP-ribose) glycohydrolase a, transcript variant X5
poly (ADP-ribose) glycohydrolase a, transcript variant X7
poly (ADP-ribose) glycohydrolase a, transcript variant X6
poly(ADP-ribose) glycohydrolase isoform X4
poly(ADP-ribose) glycohydrolase isoform X3
poly(ADP-ribose) glycohydrolase isoform X2
poly(ADP-ribose) glycohydrolase isoform X1
poly(ADP-ribose) glycohydrolase isoform X5
poly(ADP-ribose) glycohydrolase isoform X7
poly(ADP-ribose) glycohydrolase isoform X6
ribosomal protein S24, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8397 long SRA reads, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
ribosomal protein S24, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1397 long SRA reads, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
zinc finger, MIZ-type containing 1a, transcript variant X1
zinc finger, MIZ-type containing 1a, transcript variant X10
zinc finger, MIZ-type containing 1a, transcript variant X7
zinc finger, MIZ-type containing 1a, transcript variant X8
zinc finger, MIZ-type containing 1a, transcript variant X9
zinc finger, MIZ-type containing 1a, transcript variant X5
zinc finger, MIZ-type containing 1a, transcript variant X17
zinc finger, MIZ-type containing 1a, transcript variant X4
zinc finger, MIZ-type containing 1a, transcript variant X6
zinc finger, MIZ-type containing 1a, transcript variant X18
zinc finger, MIZ-type containing 1a, transcript variant X15
zinc finger, MIZ-type containing 1a, transcript variant X3
zinc finger, MIZ-type containing 1a, transcript variant X2
zinc finger, MIZ-type containing 1a, transcript variant X16
zinc finger MIZ domain-containing protein 1a isoform X1
zinc finger MIZ domain-containing protein 1a isoform X8
zinc finger MIZ domain-containing protein 1a isoform X5
zinc finger MIZ domain-containing protein 1a isoform X6
zinc finger MIZ domain-containing protein 1a isoform X7
zinc finger MIZ domain-containing protein 1a isoform X3
zinc finger MIZ domain-containing protein 1a isoform X12
zinc finger MIZ domain-containing protein 1a isoform X2
zinc finger MIZ domain-containing protein 1a isoform X11
zinc finger MIZ domain-containing protein 1a isoform X4
zinc finger MIZ domain-containing protein 1a isoform X13
zinc finger MIZ domain-containing protein 1a isoform X10
zinc finger, MIZ-type containing 1a, transcript variant X13
zinc finger, MIZ-type containing 1a, transcript variant X11
zinc finger, MIZ-type containing 1a, transcript variant X12
zinc finger, MIZ-type containing 1a, transcript variant X14
zinc finger MIZ domain-containing protein 1a isoform X9
peptidyl-prolyl cis-trans isomerase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
zinc finger CCHC domain-containing protein 24
polymerase (RNA) III (DNA directed) polypeptide A
DNA-directed RNA polymerase III subunit RPC1
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like
nucleolar and coiled-body phosphoprotein 1
calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 25 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
calcium/calmodulin-dependent protein kinase type II subunit beta
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00619
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
zinc finger, SWIM-type containing 8, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
zinc finger, SWIM-type containing 8, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
zinc finger, SWIM-type containing 8, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
zinc finger, SWIM-type containing 8, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
zinc finger, SWIM-type containing 8, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger SWIM domain-containing protein 8 isoform X1
zinc finger SWIM domain-containing protein 8 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
coiled-coil-helix-coiled-coil-helix domain containing 1
coiled-coil-helix-coiled-coil-helix domain-containing protein 1
fucosyltransferase 11 (alpha (1,3) fucosyltransferase), transcript variant X1
alpha-(1,3)-fucosyltransferase 11 isoform X1
fucosyltransferase 11 (alpha (1,3) fucosyltransferase), transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
alpha-(1,3)-fucosyltransferase 11 isoform X2
PH and SEC7 domain-containing protein 1-like
transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ras-GEF domain-containing family member 1A
chondroitin sulfate N-acetylgalactosaminyltransferase 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 20 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
chondroitin sulfate N-acetylgalactosaminyltransferase 2, transcript variant X3
chondroitin sulfate N-acetylgalactosaminyltransferase 2, transcript variant X7
chondroitin sulfate N-acetylgalactosaminyltransferase 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 20 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
chondroitin sulfate N-acetylgalactosaminyltransferase 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 22 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
chondroitin sulfate N-acetylgalactosaminyltransferase 2, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 20 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
chondroitin sulfate N-acetylgalactosaminyltransferase 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 20 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
chondroitin sulfate N-acetylgalactosaminyltransferase 2
ret proto-oncogene receptor tyrosine kinase, transcript variant X1
proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
ret proto-oncogene receptor tyrosine kinase, transcript variant X2
proto-oncogene tyrosine-protein kinase receptor Ret isoform X2
nudix (nucleoside diphosphate linked moiety X)-type motif 13
nucleoside diphosphate-linked moiety X motif 13
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein si:ch211-248a14.8
prolyl 4-hydroxylase, alpha polypeptide I b, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
prolyl 4-hydroxylase, alpha polypeptide I b, transcript variant X2
prolyl 4-hydroxylase, alpha polypeptide I b, transcript variant X3
prolyl 4-hydroxylase, alpha polypeptide I b, transcript variant X4
prolyl 4-hydroxylase subunit alpha-1 isoform X1
prolyl 4-hydroxylase subunit alpha-1 isoform X2
prolyl 4-hydroxylase subunit alpha-1 isoform X3
prolyl 4-hydroxylase subunit alpha-1 isoform X4
phospholipase A2, group XIIB, transcript variant X1
phospholipase A2, group XIIB, transcript variant X2
group XIIB secretory phospholipase A2-like protein isoform X1
group XIIB secretory phospholipase A2-like protein isoform X2
oncoprotein-induced transcript 3 protein
mitochondrial calcium uniporter, transcript variant X1
mitochondrial calcium uniporter, transcript variant X3
mitochondrial calcium uniporter, transcript variant X2
calcium uniporter protein, mitochondrial isoform X1
calcium uniporter protein, mitochondrial isoform X3
calcium uniporter protein, mitochondrial isoform X2
mitochondrial calcium uptake 1, transcript variant X15
mitochondrial calcium uptake 1, transcript variant X13
mitochondrial calcium uptake 1, transcript variant X14
mitochondrial calcium uptake 1, transcript variant X6
mitochondrial calcium uptake 1, transcript variant X2
mitochondrial calcium uptake 1, transcript variant X12
mitochondrial calcium uptake 1, transcript variant X3
mitochondrial calcium uptake 1, transcript variant X1
mitochondrial calcium uptake 1, transcript variant X11
mitochondrial calcium uptake 1, transcript variant X10
mitochondrial calcium uptake 1, transcript variant X16
mitochondrial calcium uptake 1, transcript variant X4
mitochondrial calcium uptake 1, transcript variant X8
mitochondrial calcium uptake 1, transcript variant X5
mitochondrial calcium uptake 1, transcript variant X9
mitochondrial calcium uptake 1, transcript variant X7
calcium uptake protein 1, mitochondrial isoform X1
calcium uptake protein 1, mitochondrial isoform X3
calcium uptake protein 1, mitochondrial isoform X2
calcium uptake protein 1, mitochondrial isoform X4
DnaJ heat shock protein family (Hsp40) member B12a
activating signal cointegrator 1 complex subunit 1, transcript variant X1
activating signal cointegrator 1 complex subunit 1, transcript variant X3
activating signal cointegrator 1 complex subunit 1, transcript variant X2
activating signal cointegrator 1 complex subunit 1, transcript variant X4
activating signal cointegrator 1 complex subunit 1 isoform X1
activating signal cointegrator 1 complex subunit 1 isoform X2
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
DNA damage-inducible transcript 4 protein
trypsin like peroxisomal matrix peptidase 1
LOW QUALITY PROTEIN: peroxisomal leader peptide-processing protease
GTP-binding protein SAR1a, transcript variant X1
GTP-binding protein SAR1a, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
heterogeneous nuclear ribonucleoprotein D-like, transcript variant X1
heterogeneous nuclear ribonucleoprotein D-like, transcript variant X3
heterogeneous nuclear ribonucleoprotein D-like isoform X1
heterogeneous nuclear ribonucleoprotein D-like isoform X2
biogenesis of lysosomal organelles complex-1, subunit 2
biogenesis of lysosome-related organelles complex 1 subunit 2
calcium-binding mitochondrial carrier protein SCaMC-1-A-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
calcium-binding mitochondrial carrier protein SCaMC-1-A-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
calcium-binding mitochondrial carrier protein SCaMC-1-A-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
calcium-binding mitochondrial carrier protein SCaMC-1-A-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
calcium-binding mitochondrial carrier protein SCaMC-1-A-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
calcium-binding mitochondrial carrier protein SCaMC-1-A-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
calcium-binding mitochondrial carrier protein SCaMC-1-A-like, transcript variant X5
calcium-binding mitochondrial carrier protein SCaMC-1-A-like, transcript variant X8
calcium-binding mitochondrial carrier protein SCaMC-1-A-like
calcium-binding mitochondrial carrier protein SCaMC-1-A-like, transcript variant X9
V-set immunoregulatory receptor, transcript variant X2
V-set immunoregulatory receptor, transcript variant X1
V-type immunoglobulin domain-containing suppressor of T-cell activation isoform X1
V-type immunoglobulin domain-containing suppressor of T-cell activation isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
solute carrier family 29 member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 19 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
solute carrier family 29 member 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 long SRA reads, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
solute carrier family 29 member 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 long SRA reads, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00563
pterin-4-alpha-carbinolamine dehydratase-like
paired-like homeodomain 3, transcript variant X1
paired-like homeodomain 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
core histone macro-H2A.2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
core histone macro-H2A.2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
core histone macro-H2A.2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
core histone macro-H2A.2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
core histone macro-H2A.2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 115 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
collagen alpha-1(XIII) chain-like, transcript variant X2
collagen alpha-1(XIII) chain-like, transcript variant X1
collagen alpha-1(XIII) chain-like, transcript variant X3
collagen alpha-1(XIII) chain-like, transcript variant X4
collagen alpha-1(XIII) chain-like, transcript variant X5
collagen alpha-1(XIII) chain-like, transcript variant X6
collagen alpha-1(XIII) chain-like isoform X2
collagen alpha-1(XIII) chain-like isoform X1
collagen alpha-1(XIII) chain-like isoform X3
collagen alpha-1(XIII) chain-like isoform X4
collagen alpha-1(XIII) chain-like isoform X5
collagen alpha-1(XIII) chain-like isoform X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
protein FAM241B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
protein FAM241B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
inactive ubiquitin carboxyl-terminal hydrolase 54
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
SEC24 homolog C, COPII coat complex component
coiled-coil serine-rich protein 2a, transcript variant X4
coiled-coil serine-rich protein 2a, transcript variant X1
coiled-coil serine-rich protein 2a, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
coiled-coil serine-rich protein 2a, transcript variant X2
serine-rich coiled-coil domain-containing protein 2 isoform X3
serine-rich coiled-coil domain-containing protein 2 isoform X1
serine-rich coiled-coil domain-containing protein 2 isoform X2
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
glutamate receptor ionotropic, delta-1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pro-neuregulin-3, membrane-bound isoform-like