Rhincodon typus isolate 14 chromosome 33, sRhiTyp1.1, whole genome shotgun sequence.
type: Entry
definition: Rhincodon typus isolate 14 chromosome 33, sRhiTyp1.1, whole genome shotgun sequence.
sequence version: NC_063364.1
sequence date: 2022-06-09
sequence: sequence
division: CON
label: NC_063364.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA842712
dblink: SAMN19519256
keyword: WGS
keyword: RefSeq
source: Rhincodon typus (whale shark)
organism: Rhincodon typus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038830.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 35614625
topology: linear
so has quality: SO_0000987
location: 1..35614625
location: region:1-35614625:1
RO_0002162: 259920

NC_063364
type: RefSeq
SIO_000068: refseq

PRJNA842712
type: BioProject
SIO_000068: bioproject

SAMN19519256
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35614625:1
position: 35614625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35614625:1:source
so part of: sequence
organism: Rhincodon typus
mol type: genomic DNA
isolate: 14
chromosome: 33
sex: male
tissue type: blood
dev stage: adult
collected by: 2018-05-24

259920
type: Taxonomy
SIO_000068: taxonomy

LOC125486819
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 79497..99508
location: region:79497-99508:1
so has part: feature:79497-99508:1:exon
subclass of: SO_0000011

125486819
type: Gene
SIO_000068: ncbigene

position:79497:1
position: 79497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99508:1
position: 99508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79497-99508:1:exon

LOC125486819
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125486819
product: uncharacterized LOC125486819
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_007265445.1
SIO_010081: LOC125486819
subclass of: SO_0000673
so part of: LOC125486819
location: join(79497..80641,96485..96733,99491..99508)
location: region:79497-99508:1
so has part: feature:79497-80641:1:exon
so has part: feature:96485-96733:1:exon
so has part: feature:99491-99508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79497-80641:1:exon

position:80641:1
position: 80641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96485-96733:1:exon

position:96485:1
position: 96485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96733:1
position: 96733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99491-99508:1:exon

position:99491:1
position: 99491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnaq-uug
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnaq-uug
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 80136..80207
location: region:80136-80207:1
so has part: feature:80136-80207:1:exon
subclass of: SO_0000663

109938428
type: Gene
SIO_000068: ncbigene

position:80136:1
position: 80136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80207:1
position: 80207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80136-80207:1:exon

trnaq-uug
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnaq-uug
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glutamine (anticodon UUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:80169..80171,aa:Gln,seq:ttg)
SIO_010081: trnaq-uug
subclass of: SO_0000673
so part of: trnaq-uug
location: 80136..80207
location: region:80136-80207:1
so has part: feature:80136-80207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80136-80207:1:exon

unc93b1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: unc93b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(168606..183765)
location: region:168606-183765:-1
so has part: feature:168606-183765:-1:exon
subclass of: SO_0000010

109937325
type: Gene
SIO_000068: ncbigene

position:168606:-1
position: 168606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183765:-1
position: 183765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168606-183765:-1:exon

unc93b1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: unc93b1
product: unc-93 homolog B1, TLR signaling regulator, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020535928.2
SIO_010081: unc93b1
subclass of: SO_0000673
so part of: unc93b1
location: complement(join(168606..170771,171423..171541,172154..172433,172622..172804,176082..176206,177635..177728,179297..179426,180662..180823,181137..181290,181752..181893,182880..182999,183594..183765))
location: region:168606-183765:-1
so has part: feature:183594-183765:-1:exon
so has part: feature:182880-182999:-1:exon
so has part: feature:181752-181893:-1:exon
so has part: feature:181137-181290:-1:exon
so has part: feature:180662-180823:-1:exon
so has part: feature:179297-179426:-1:exon
so has part: feature:177635-177728:-1:exon
so has part: feature:176082-176206:-1:exon
so has part: feature:172622-172804:-1:exon
so has part: feature:172154-172433:-1:exon
so has part: feature:171423-171541:-1:exon
so has part: feature:168606-170771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183594-183765:-1:exon

position:183594:-1
position: 183594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182880-182999:-1:exon

position:182880:-1
position: 182880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182999:-1
position: 182999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181752-181893:-1:exon

position:181752:-1
position: 181752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181893:-1
position: 181893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181137-181290:-1:exon

position:181137:-1
position: 181137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181290:-1
position: 181290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180662-180823:-1:exon

position:180662:-1
position: 180662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180823:-1
position: 180823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:179297-179426:-1:exon

position:179297:-1
position: 179297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179426:-1
position: 179426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:177635-177728:-1:exon

position:177635:-1
position: 177635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177728:-1
position: 177728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176082-176206:-1:exon

position:176082:-1
position: 176082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176206:-1
position: 176206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:172622-172804:-1:exon

position:172622:-1
position: 172622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172804:-1
position: 172804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:172154-172433:-1:exon

position:172154:-1
position: 172154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172433:-1
position: 172433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:171423-171541:-1:exon

position:171423:-1
position: 171423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171541:-1
position: 171541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:168606-170771:-1:exon

position:170771:-1
position: 170771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

unc93b1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: unc93b1
product: unc-93 homolog B1, TLR signaling regulator, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615927.1
SIO_010081: unc93b1
subclass of: SO_0000673
so part of: unc93b1
location: complement(join(168606..170771,171423..171541,172154..172433,172622..172804,176082..176206,177635..177728,179297..179426,180662..180823,181137..181290,181752..181893,182872..182983))
location: region:168606-182983:-1
so has part: feature:182872-182983:-1:exon
so has part: feature:181752-181893:-1:exon
so has part: feature:181137-181290:-1:exon
so has part: feature:180662-180823:-1:exon
so has part: feature:179297-179426:-1:exon
so has part: feature:177635-177728:-1:exon
so has part: feature:176082-176206:-1:exon
so has part: feature:172622-172804:-1:exon
so has part: feature:172154-172433:-1:exon
so has part: feature:171423-171541:-1:exon
so has part: feature:168606-170771:-1:exon

position:182983:-1
position: 182983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182872-182983:-1:exon

position:182872:-1
position: 182872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181752-181893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181137-181290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180662-180823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179297-179426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177635-177728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176082-176206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:172622-172804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:172154-172433:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171423-171541:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:168606-170771:-1:exon

unc93b1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: unc93b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-93 homolog B1 isoform X1
translation: MEPDTIDRHDAQHNGTAAGEQLLQGYQDDHFDAQIDDFMAPNQDYNEEEEERKYFCRKRLAMVKNVVFASLGSSLTYGVYLGLLQMQLILHYDETYREVKYGNLGLEDIDNKMLMGINVTPIVALLYTPVLIRFLGTKWMMFLAIGIYALFVSTNYWERYYTLVPSAVAIGAAIVPLWAAVGNYITRMAQKYYEYVNYKEDHVLEQKKLPKGASHQYVIIFQSIFYFLFNLSFVFAEMPMAFFLNRYLYQSNHTLYDVKRCGTEMKGLIEGLNKTVLMKLPQSISLIVVESVLMAVAFVAMILVLTLCGPAYRPTEEIDLRSIGWGNIFQLPFKHMRDYRLRLLLPFFIYSGFEVLFACTGFALSYGVCSLGLEHLASIIIAYGVSASVFSLLSLSMLWVARSVPLLSGATVQLVLIITLFCWAPSPKKSHTTSLLGVYGVAVLWGLGTALNKTSLATLLGMLYEDKERQDFIFSIYHWWQAIAIFMVYLWSGAHMKVKLSIMLVTLVIAIASYLWMERKLARRDPFRLPRIPKPQHKTKGYRYLEDENSDQSDEEAERQSNPSEPDPDQDPLDTDLYQPADPDVAEGQD
SIO_010081: unc93b1
subclass of: SO_0000673
so part of: unc93b1
location: complement(join(170490..170771,171423..171541,172154..172433,172622..172804,176082..176206,177635..177728,179297..179426,180662..180823,181137..181290,181752..181893,182880..182981))
location: region:170490-182981:-1
so has part: feature:182880-182981:-1:exon
so has part: feature:181752-181893:-1:exon
so has part: feature:181137-181290:-1:exon
so has part: feature:180662-180823:-1:exon
so has part: feature:179297-179426:-1:exon
so has part: feature:177635-177728:-1:exon
so has part: feature:176082-176206:-1:exon
so has part: feature:172622-172804:-1:exon
so has part: feature:172154-172433:-1:exon
so has part: feature:171423-171541:-1:exon
so has part: feature:170490-170771:-1:exon

XP_020391517.2
type: Protein
SIO_000068: ncbiprotein

position:170490:-1
position: 170490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182981:-1
position: 182981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182880-182981:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181752-181893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181137-181290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180662-180823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179297-179426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177635-177728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176082-176206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:172622-172804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:172154-172433:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171423-171541:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:170490-170771:-1:exon

unc93b1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: unc93b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-93 homolog B1 isoform X2
translation: MAPNQDYNEEEEERKYFCRKRLAMVKNVVFASLGSSLTYGVYLGLLQMQLILHYDETYREVKYGNLGLEDIDNKMLMGINVTPIVALLYTPVLIRFLGTKWMMFLAIGIYALFVSTNYWERYYTLVPSAVAIGAAIVPLWAAVGNYITRMAQKYYEYVNYKEDHVLEQKKLPKGASHQYVIIFQSIFYFLFNLSFVFAEMPMAFFLNRYLYQSNHTLYDVKRCGTEMKGLIEGLNKTVLMKLPQSISLIVVESVLMAVAFVAMILVLTLCGPAYRPTEEIDLRSIGWGNIFQLPFKHMRDYRLRLLLPFFIYSGFEVLFACTGFALSYGVCSLGLEHLASIIIAYGVSASVFSLLSLSMLWVARSVPLLSGATVQLVLIITLFCWAPSPKKSHTTSLLGVYGVAVLWGLGTALNKTSLATLLGMLYEDKERQDFIFSIYHWWQAIAIFMVYLWSGAHMKVKLSIMLVTLVIAIASYLWMERKLARRDPFRLPRIPKPQHKTKGYRYLEDENSDQSDEEAERQSNPSEPDPDQDPLDTDLYQPADPDVAEGQD
SIO_010081: unc93b1
subclass of: SO_0000673
so part of: unc93b1
location: complement(join(170490..170771,171423..171541,172154..172433,172622..172804,176082..176206,177635..177728,179297..179426,180662..180823,181137..181290,181752..181881))
location: region:170490-181881:-1
so has part: feature:181752-181881:-1:exon
so has part: feature:181137-181290:-1:exon
so has part: feature:180662-180823:-1:exon
so has part: feature:179297-179426:-1:exon
so has part: feature:177635-177728:-1:exon
so has part: feature:176082-176206:-1:exon
so has part: feature:172622-172804:-1:exon
so has part: feature:172154-172433:-1:exon
so has part: feature:171423-171541:-1:exon
so has part: feature:170490-170771:-1:exon

XP_048471884.1
type: Protein
SIO_000068: ncbiprotein

position:181881:-1
position: 181881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181752-181881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181137-181290:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180662-180823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:179297-179426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177635-177728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:176082-176206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172622-172804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:172154-172433:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:171423-171541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:170490-170771:-1:exon

spg21
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: spg21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(329384..408107)
location: region:329384-408107:-1
so has part: feature:329384-408107:-1:exon
subclass of: SO_0000010

109928404
type: Gene
SIO_000068: ncbigene

position:329384:-1
position: 329384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408107:-1
position: 408107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329384-408107:-1:exon

spg21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: spg21
product: SPG21 abhydrolase domain containing, maspardin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615709.1
SIO_010081: spg21
subclass of: SO_0000673
so part of: spg21
location: complement(join(329384..330423,332507..332647,339306..339413,352684..352792,356101..356246,358484..358564,370753..370846,381290..381647,384790..384903,408029..408107))
location: region:329384-408107:-1
so has part: feature:408029-408107:-1:exon
so has part: feature:384790-384903:-1:exon
so has part: feature:381290-381647:-1:exon
so has part: feature:370753-370846:-1:exon
so has part: feature:358484-358564:-1:exon
so has part: feature:356101-356246:-1:exon
so has part: feature:352684-352792:-1:exon
so has part: feature:339306-339413:-1:exon
so has part: feature:332507-332647:-1:exon
so has part: feature:329384-330423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408029-408107:-1:exon

position:408029:-1
position: 408029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:384790-384903:-1:exon

position:384790:-1
position: 384790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384903:-1
position: 384903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:381290-381647:-1:exon

position:381290:-1
position: 381290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381647:-1
position: 381647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:370753-370846:-1:exon

position:370753:-1
position: 370753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370846:-1
position: 370846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:358484-358564:-1:exon

position:358484:-1
position: 358484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358564:-1
position: 358564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:356101-356246:-1:exon

position:356101:-1
position: 356101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356246:-1
position: 356246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:352684-352792:-1:exon

position:352684:-1
position: 352684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352792:-1
position: 352792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:339306-339413:-1:exon

position:339306:-1
position: 339306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339413:-1
position: 339413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:332507-332647:-1:exon

position:332507:-1
position: 332507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332647:-1
position: 332647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:329384-330423:-1:exon

position:330423:-1
position: 330423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

spg21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: spg21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: maspardin
translation: MAPGVNEHSAPNMTSLQCFHPCFLFGPKKKKRRGKSRGEETEHHEKKVGSKCSKGSRSASLNSFWKLLLVSSRRFAALDVLVTMGEIKVSPDYNWFRSTVPLKKLQYPVYWDLLEFCDGFRKLLDHLQLDKVHIFGASLGGFLAQKFAEYAHKSPRVHSLILCNSFSDTSIFNQSWTASSFWLLPGFMLKKIVLGNFTTGPVDPKMADAIDFMVDRLESLGQGELASRLTLNCQNSYVEPHKIKEVPVTIMDVFDHSALSQEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHLRQFHGTRYAAIDPAMVSAEELEVHKTRFENGNEEDL
SIO_010081: spg21
subclass of: SO_0000673
so part of: spg21
location: complement(join(330304..330423,332507..332647,339306..339413,352684..352792,356101..356246,358484..358564,370753..370846,381290..381507))
location: region:330304-381507:-1
so has part: feature:381290-381507:-1:exon
so has part: feature:370753-370846:-1:exon
so has part: feature:358484-358564:-1:exon
so has part: feature:356101-356246:-1:exon
so has part: feature:352684-352792:-1:exon
so has part: feature:339306-339413:-1:exon
so has part: feature:332507-332647:-1:exon
so has part: feature:330304-330423:-1:exon

XP_048471666.1
type: Protein
SIO_000068: ncbiprotein

position:330304:-1
position: 330304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381507:-1
position: 381507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381290-381507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370753-370846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358484-358564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356101-356246:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352684-352792:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339306-339413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332507-332647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330304-330423:-1:exon

LOC109936053
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 434917..438386
location: region:434917-438386:1
so has part: feature:434917-438386:1:exon

109936053
type: Gene
SIO_000068: ncbigene

position:434917:1
position: 434917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438386:1
position: 438386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434917-438386:1:exon

LOC109936053
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC109936053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC109936053
subclass of: SO_0000673
so part of: LOC109936053
location: 434917..434940
location: region:434917-434940:1
so has part: feature:434917-434940:1:exon

position:434940:1
position: 434940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434917-434940:1:exon

LOC109936053
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC109936053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC109936053
subclass of: SO_0000673
so part of: LOC109936053
location: 437431..437662
location: region:437431-437662:1
so has part: feature:437431-437662:1:exon

position:437431:1
position: 437431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437662:1
position: 437662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437431-437662:1:exon

LOC109936053
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC109936053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC109936053
subclass of: SO_0000673
so part of: LOC109936053
location: 437924..438386
location: region:437924-438386:1
so has part: feature:437924-438386:1:exon

position:437924:1
position: 437924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437924-438386:1:exon

LOC109914444
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109914444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(455091..459298)
location: region:455091-459298:-1
so has part: feature:455091-459298:-1:exon
subclass of: SO_0000010

109914444
type: Gene
SIO_000068: ncbigene

position:455091:-1
position: 455091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459298:-1
position: 459298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455091-459298:-1:exon

LOC109914444
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109914444
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048615710.1
SIO_010081: LOC109914444
subclass of: SO_0000673
so part of: LOC109914444
location: complement(join(455091..456014,457830..457937,458172..458299,459071..459298))
location: region:455091-459298:-1
so has part: feature:459071-459298:-1:exon
so has part: feature:458172-458299:-1:exon
so has part: feature:457830-457937:-1:exon
so has part: feature:455091-456014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:459071-459298:-1:exon

position:459071:-1
position: 459071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458172-458299:-1:exon

position:458172:-1
position: 458172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458299:-1
position: 458299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457830-457937:-1:exon

position:457830:-1
position: 457830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457937:-1
position: 457937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:455091-456014:-1:exon

position:456014:-1
position: 456014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109914444
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109914444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MEVMKEPEILIDEQPASSGMPKPSELPLGILGGHAFWCMTCGKGFKWRCLLDAHLRVHTGEKPFECLLCMKRFSKSNELRVHQRIHTGEKPFECLMCKKRFYRSSHLSRHQQFHTGEKKFECQVCTKRFFTSSHLTRHQRIHTGEKPFECPECSKRFNSPSELTVHQRVHTGEKPYECIDCKKRFNRPGDLTVHRRIHTGEKRLECPQCKKQFSRPSELVVHQRVHTGEKPFECAVCKKRFYTSSHLIQHQGIHTGEKPFECPLCKKRFYRSSNLTRHQRGEGHNEKGNPNQNQR
SIO_010081: LOC109914444
subclass of: SO_0000673
so part of: LOC109914444
location: complement(455091..455978)
location: region:455091-455978:-1
so has part: feature:455091-455978:-1:exon

XP_048471667.1
type: Protein
SIO_000068: ncbiprotein

position:455978:-1
position: 455978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455091-455978:-1:exon

ankdd1a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ankdd1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(467846..654958)
location: region:467846-654958:-1
so has part: feature:467846-654958:-1:exon
subclass of: SO_0000010

109914446
type: Gene
SIO_000068: ncbigene

position:467846:-1
position: 467846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654958:-1
position: 654958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467846-654958:-1:exon

ankdd1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ankdd1a
product: ankyrin repeat and death domain containing 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615945.1
SIO_010081: ankdd1a
subclass of: SO_0000673
so part of: ankdd1a
location: complement(join(467846..471533,498542..498673,518114..518315,534231..534326,569486..569584,579232..579330,587017..587115,588450..588548,591943..592047,610044..610142,620978..621076,648133..648236,654860..654958))
location: region:467846-654958:-1
so has part: feature:654860-654958:-1:exon
so has part: feature:648133-648236:-1:exon
so has part: feature:620978-621076:-1:exon
so has part: feature:610044-610142:-1:exon
so has part: feature:591943-592047:-1:exon
so has part: feature:588450-588548:-1:exon
so has part: feature:587017-587115:-1:exon
so has part: feature:579232-579330:-1:exon
so has part: feature:569486-569584:-1:exon
so has part: feature:534231-534326:-1:exon
so has part: feature:518114-518315:-1:exon
so has part: feature:498542-498673:-1:exon
so has part: feature:467846-471533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654860-654958:-1:exon

position:654860:-1
position: 654860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648133-648236:-1:exon

position:648133:-1
position: 648133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648236:-1
position: 648236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620978-621076:-1:exon

position:620978:-1
position: 620978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621076:-1
position: 621076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:610044-610142:-1:exon

position:610044:-1
position: 610044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610142:-1
position: 610142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:591943-592047:-1:exon

position:591943:-1
position: 591943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592047:-1
position: 592047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:588450-588548:-1:exon

position:588450:-1
position: 588450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588548:-1
position: 588548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:587017-587115:-1:exon

position:587017:-1
position: 587017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587115:-1
position: 587115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:579232-579330:-1:exon

position:579232:-1
position: 579232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579330:-1
position: 579330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:569486-569584:-1:exon

position:569486:-1
position: 569486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569584:-1
position: 569584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:534231-534326:-1:exon

position:534231:-1
position: 534231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534326:-1
position: 534326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:518114-518315:-1:exon

position:518114:-1
position: 518114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518315:-1
position: 518315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:498542-498673:-1:exon

position:498542:-1
position: 498542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498673:-1
position: 498673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:467846-471533:-1:exon

position:471533:-1
position: 471533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ankdd1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ankdd1a
product: ankyrin repeat and death domain containing 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615944.1
SIO_010081: ankdd1a
subclass of: SO_0000673
so part of: ankdd1a
location: complement(join(467846..471533,498542..498673,518114..518315,534231..534326,557812..557910,569486..569584,579232..579330,587017..587115,588450..588548,591943..592047,610044..610142,620978..621076,648133..648236,654860..654958))
location: region:467846-654958:-1
so has part: feature:654860-654958:-1:exon
so has part: feature:648133-648236:-1:exon
so has part: feature:620978-621076:-1:exon
so has part: feature:610044-610142:-1:exon
so has part: feature:591943-592047:-1:exon
so has part: feature:588450-588548:-1:exon
so has part: feature:587017-587115:-1:exon
so has part: feature:579232-579330:-1:exon
so has part: feature:569486-569584:-1:exon
so has part: feature:557812-557910:-1:exon
so has part: feature:534231-534326:-1:exon
so has part: feature:518114-518315:-1:exon
so has part: feature:498542-498673:-1:exon
so has part: feature:467846-471533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654860-654958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648133-648236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620978-621076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610044-610142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591943-592047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588450-588548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587017-587115:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579232-579330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569486-569584:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557812-557910:-1:exon

position:557812:-1
position: 557812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557910:-1
position: 557910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:534231-534326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:518114-518315:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:498542-498673:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:467846-471533:-1:exon

ankdd1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ankdd1a
product: ankyrin repeat and death domain containing 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 9 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048615943.1
SIO_010081: ankdd1a
subclass of: SO_0000673
so part of: ankdd1a
location: complement(join(467846..471533,498542..498673,518114..518315,534231..534326,545402..545500,557812..557910,569486..569584,579232..579330,587017..587115,588450..588548,591943..592047,610044..610142,620978..621076,648133..648236,654860..654958))
location: region:467846-654958:-1
so has part: feature:654860-654958:-1:exon
so has part: feature:648133-648236:-1:exon
so has part: feature:620978-621076:-1:exon
so has part: feature:610044-610142:-1:exon
so has part: feature:591943-592047:-1:exon
so has part: feature:588450-588548:-1:exon
so has part: feature:587017-587115:-1:exon
so has part: feature:579232-579330:-1:exon
so has part: feature:569486-569584:-1:exon
so has part: feature:557812-557910:-1:exon
so has part: feature:545402-545500:-1:exon
so has part: feature:534231-534326:-1:exon
so has part: feature:518114-518315:-1:exon
so has part: feature:498542-498673:-1:exon
so has part: feature:467846-471533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654860-654958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648133-648236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620978-621076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610044-610142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591943-592047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588450-588548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587017-587115:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579232-579330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569486-569584:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557812-557910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545402-545500:-1:exon

position:545402:-1
position: 545402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545500:-1
position: 545500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:534231-534326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518114-518315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:498542-498673:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:467846-471533:-1:exon

ankdd1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ankdd1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and death domain-containing protein 1A isoform X3
translation: MADGESLLRSEQDFHDAAKGNNVIRMELLLKNGVNVNAKNSIDQTALHWAVGAGHEEAVKFLLDHNASVDDQDSFGMNALLLAAWFGHLRILRTLVNVGAKLSCENKNGLNLLHCAARRGHIKILEFIMEDLEDIWLDKPDNMQRTALHLAASYGNLEVVEFLIGSGCVHGLKDKEQNTPLHLSARSGHVEVLQKIVETAVDLDEKNWEGETALHLAAEEGHSNCVKVLLNGTCDVNAQTNKNMTALHYAACHGWVKVAELLIEADINVDAVNHQGKTSLEIAARGNHISLVDMIIKADRFYKWEKDHPNIDSESFVGMHVTFRQDRRPETQHIRSVIWRLATKYLKPNEWKKLAHFWKFTEAHIKAIEQQWAGAKSYKEHGHRMLLNWLPGVIISGENPIKELYEGLVGIGRRDLAESIRRKANADCSSPRKCAVM
SIO_010081: ankdd1a
subclass of: SO_0000673
so part of: ankdd1a
location: complement(join(471472..471533,498542..498673,518114..518315,534231..534326,569486..569584,579232..579330,587017..587115,588450..588548,591943..592047,610044..610142,620978..621076,648133..648236,654860..654878))
location: region:471472-654878:-1
so has part: feature:654860-654878:-1:exon
so has part: feature:648133-648236:-1:exon
so has part: feature:620978-621076:-1:exon
so has part: feature:610044-610142:-1:exon
so has part: feature:591943-592047:-1:exon
so has part: feature:588450-588548:-1:exon
so has part: feature:587017-587115:-1:exon
so has part: feature:579232-579330:-1:exon
so has part: feature:569486-569584:-1:exon
so has part: feature:534231-534326:-1:exon
so has part: feature:518114-518315:-1:exon
so has part: feature:498542-498673:-1:exon
so has part: feature:471472-471533:-1:exon

XP_048471902.1
type: Protein
SIO_000068: ncbiprotein

position:471472:-1
position: 471472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654878:-1
position: 654878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654860-654878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648133-648236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620978-621076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610044-610142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591943-592047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588450-588548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587017-587115:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579232-579330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569486-569584:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534231-534326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:518114-518315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498542-498673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471472-471533:-1:exon

ankdd1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ankdd1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and death domain-containing protein 1A isoform X2
translation: MADGESLLRSEQDFHDAAKGNNVIRMELLLKNGVNVNAKNSIDQTALHWAVGAGHEEAVKFLLDHNASVDDQDSFGMNALLLAAWFGHLRILRTLVNVGAKLSCENKNGLNLLHCAARRGHIKILEFIMEDLEDIWLDKPDNMQRTALHLAASYGNLEVVEFLIGSGCVHGLKDKEQNTPLHLSARSGHVEVLQKIVETAVDLDEKNWEGETALHLAAEEGHSNCVKVLLNGTCDVNAQTNKNMTALHYAACHGWVKVAELLIEADINVDAVNHQGASAIHLAVLHNHDSIVKLLIDAECDLDIADHQGKTSLEIAARGNHISLVDMIIKADRFYKWEKDHPNIDSESFVGMHVTFRQDRRPETQHIRSVIWRLATKYLKPNEWKKLAHFWKFTEAHIKAIEQQWAGAKSYKEHGHRMLLNWLPGVIISGENPIKELYEGLVGIGRRDLAESIRRKANADCSSPRKCAVM
SIO_010081: ankdd1a
subclass of: SO_0000673
so part of: ankdd1a
location: complement(join(471472..471533,498542..498673,518114..518315,534231..534326,557812..557910,569486..569584,579232..579330,587017..587115,588450..588548,591943..592047,610044..610142,620978..621076,648133..648236,654860..654878))
location: region:471472-654878:-1
so has part: feature:654860-654878:-1:exon
so has part: feature:648133-648236:-1:exon
so has part: feature:620978-621076:-1:exon
so has part: feature:610044-610142:-1:exon
so has part: feature:591943-592047:-1:exon
so has part: feature:588450-588548:-1:exon
so has part: feature:587017-587115:-1:exon
so has part: feature:579232-579330:-1:exon
so has part: feature:569486-569584:-1:exon
so has part: feature:557812-557910:-1:exon
so has part: feature:534231-534326:-1:exon
so has part: feature:518114-518315:-1:exon
so has part: feature:498542-498673:-1:exon
so has part: feature:471472-471533:-1:exon

XP_048471901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:654860-654878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648133-648236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620978-621076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610044-610142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591943-592047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588450-588548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587017-587115:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579232-579330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569486-569584:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557812-557910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534231-534326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:518114-518315:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:498542-498673:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:471472-471533:-1:exon

ankdd1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ankdd1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and death domain-containing protein 1A isoform X1
translation: MADGESLLRSEQDFHDAAKGNNVIRMELLLKNGVNVNAKNSIDQTALHWAVGAGHEEAVKFLLDHNASVDDQDSFGMNALLLAAWFGHLRILRTLVNVGAKLSCENKNGLNLLHCAARRGHIKILEFIMEDLEDIWLDKPDNMQRTALHLAASYGNLEVVEFLIGSGCVHGLKDKEQNTPLHLSARSGHVEVLQKIVETAVDLDEKNWEGETALHLAAEEGHSNCVKVLLNGTCDVNAQTNKNMTALHYAACHGWVKVAELLIEADINVDAVNHQGASAIHLAVLHNHDSIVKLLIDAECDLDIADHRQQTALHIAAENGRHVIADMILIAGVNLKLVDKQGKTSLEIAARGNHISLVDMIIKADRFYKWEKDHPNIDSESFVGMHVTFRQDRRPETQHIRSVIWRLATKYLKPNEWKKLAHFWKFTEAHIKAIEQQWAGAKSYKEHGHRMLLNWLPGVIISGENPIKELYEGLVGIGRRDLAESIRRKANADCSSPRKCAVM
SIO_010081: ankdd1a
subclass of: SO_0000673
so part of: ankdd1a
location: complement(join(471472..471533,498542..498673,518114..518315,534231..534326,545402..545500,557812..557910,569486..569584,579232..579330,587017..587115,588450..588548,591943..592047,610044..610142,620978..621076,648133..648236,654860..654878))
location: region:471472-654878:-1
so has part: feature:654860-654878:-1:exon
so has part: feature:648133-648236:-1:exon
so has part: feature:620978-621076:-1:exon
so has part: feature:610044-610142:-1:exon
so has part: feature:591943-592047:-1:exon
so has part: feature:588450-588548:-1:exon
so has part: feature:587017-587115:-1:exon
so has part: feature:579232-579330:-1:exon
so has part: feature:569486-569584:-1:exon
so has part: feature:557812-557910:-1:exon
so has part: feature:545402-545500:-1:exon
so has part: feature:534231-534326:-1:exon
so has part: feature:518114-518315:-1:exon
so has part: feature:498542-498673:-1:exon
so has part: feature:471472-471533:-1:exon

XP_048471900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:654860-654878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648133-648236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620978-621076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610044-610142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591943-592047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588450-588548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587017-587115:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579232-579330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569486-569584:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557812-557910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545402-545500:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534231-534326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518114-518315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:498542-498673:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:471472-471533:-1:exon

LOC125486771
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(690136..736370)
location: region:690136-736370:-1
so has part: feature:690136-736370:-1:exon
subclass of: SO_0000010

125486771
type: Gene
SIO_000068: ncbigene

position:690136:-1
position: 690136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736370:-1
position: 736370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690136-736370:-1:exon

LOC125486771
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125486771
product: calcium-binding mitochondrial carrier protein SCaMC-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048615711.1
SIO_010081: LOC125486771
subclass of: SO_0000673
so part of: LOC125486771
location: complement(join(690136..690320,699214..699229,736224..736370))
location: region:690136-736370:-1
so has part: feature:736224-736370:-1:exon
so has part: feature:699214-699229:-1:exon
so has part: feature:690136-690320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:736224-736370:-1:exon

position:736224:-1
position: 736224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:699214-699229:-1:exon

position:699214:-1
position: 699214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699229:-1
position: 699229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690136-690320:-1:exon

position:690320:-1
position: 690320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125486771
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125486771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-3-like
translation: MYSGFLFSESSSSQPYVTTWWKQLLAGATAGAVSRTSTAPLDRLKIYIQTTTTKTIVRGGPHVSMHQHFYNIIREEGLFGLYRGFTPNCMKVVPAVSISFVVYEEMKNILGLTSN
SIO_010081: LOC125486771
subclass of: SO_0000673
so part of: LOC125486771
location: complement(join(690136..690320,699214..699229,736224..736370))
location: region:690136-736370:-1
so has part: feature:736224-736370:-1:exon
so has part: feature:699214-699229:-1:exon
so has part: feature:690136-690320:-1:exon

XP_048471668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:736224-736370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:699214-699229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690136-690320:-1:exon

LOC109924055
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(792531..842872)
location: region:792531-842872:-1
so has part: feature:792531-842872:-1:exon
subclass of: SO_0000010

109924055
type: Gene
SIO_000068: ncbigene

position:792531:-1
position: 792531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842872:-1
position: 842872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:792531-842872:-1:exon

LOC109924055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924055
product: pleckstrin homology domain-containing family O member 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615975.1
SIO_010081: LOC109924055
subclass of: SO_0000673
so part of: LOC109924055
location: complement(join(792531..794093,794131..794605,795862..795960,797821..797925,842152..842271,842480..842605,842700..842872))
location: region:792531-842872:-1
so has part: feature:842700-842872:-1:exon
so has part: feature:842480-842605:-1:exon
so has part: feature:842152-842271:-1:exon
so has part: feature:797821-797925:-1:exon
so has part: feature:795862-795960:-1:exon
so has part: feature:794131-794605:-1:exon
so has part: feature:792531-794093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:842700-842872:-1:exon

position:842700:-1
position: 842700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842480-842605:-1:exon

position:842480:-1
position: 842480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842605:-1
position: 842605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:842152-842271:-1:exon

position:842152:-1
position: 842152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842271:-1
position: 842271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:797821-797925:-1:exon

position:797821:-1
position: 797821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797925:-1
position: 797925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:795862-795960:-1:exon

position:795862:-1
position: 795862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795960:-1
position: 795960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:794131-794605:-1:exon

position:794131:-1
position: 794131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794605:-1
position: 794605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:792531-794093:-1:exon

position:794093:-1
position: 794093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109924055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family O member 1-like
translation: MGEDGGSPGRTGWVRKQCGRSLLGSSWKERFIRLQRGRLLIFQQQDDAQYEEMVELGKYQRCQEIRGFMKRNQFRLVLVRRSGTKVPELKFQINDAEEKDSWLSALNEAIGEANNKEFDQVTVDEKCSLDHLTRNRAKINHTRRPPTRQHRKEVASAVSSGIQRLELGAQTLIIEKSTDEAQLKEKASNQVNKNRPVLMPKARHTNAKSNDGLEMKKEGPVTEEGEGPSTQEPLDQAGEGPLAEKEEGPPAEKGAGPPAEKGAGPPAEKGAGPPAEKGAGPPAEVGEGPPAKEGESLPTKKEEGPPAEQGEGPPAEQGEGPPAEKGESGKLSCTRVLVSDLFKNEGESDFQTRASADTSEMEKQRSETNSNSSLNRTNLSWVKCASLGDILSESKRQGIRKQFDTYGNLKNTQVEKMESGIAFELKATKELLQQVSRKEAAVEQPLQSNTSQDSWSTRSAARLLNDAMATWSEADKVLQELKDLKELYKKPATLTSEERERRKNLLTFYRRSVP
SIO_010081: LOC109924055
subclass of: SO_0000673
so part of: LOC109924055
location: complement(join(793483..794093,794131..794605,795862..795960,797821..797925,842152..842271,842480..842605,842700..842708))
location: region:793483-842708:-1
so has part: feature:842700-842708:-1:exon
so has part: feature:842480-842605:-1:exon
so has part: feature:842152-842271:-1:exon
so has part: feature:797821-797925:-1:exon
so has part: feature:795862-795960:-1:exon
so has part: feature:794131-794605:-1:exon
so has part: feature:793483-794093:-1:exon

XP_048471932.1
type: Protein
SIO_000068: ncbiprotein

position:793483:-1
position: 793483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842708:-1
position: 842708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842700-842708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842480-842605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842152-842271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797821-797925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:795862-795960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794131-794605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:793483-794093:-1:exon

snrpa1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: snrpa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 887182..912109
location: region:887182-912109:1
so has part: feature:887182-912109:1:exon
subclass of: SO_0000010

109917005
type: Gene
SIO_000068: ncbigene

position:887182:1
position: 887182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912109:1
position: 912109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887182-912109:1:exon

snrpa1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: snrpa1
product: small nuclear ribonucleoprotein polypeptide A'
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020516774.2
SIO_010081: snrpa1
subclass of: SO_0000673
so part of: snrpa1
location: join(887182..887301,891526..891572,893441..893543,900833..900912,901270..901345,906390..906483,911710..912109)
location: region:887182-912109:1
so has part: feature:887182-887301:1:exon
so has part: feature:891526-891572:1:exon
so has part: feature:893441-893543:1:exon
so has part: feature:900833-900912:1:exon
so has part: feature:901270-901345:1:exon
so has part: feature:906390-906483:1:exon
so has part: feature:911710-912109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887182-887301:1:exon

position:887301:1
position: 887301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891526-891572:1:exon

position:891526:1
position: 891526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891572:1
position: 891572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:893441-893543:1:exon

position:893441:1
position: 893441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893543:1
position: 893543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900833-900912:1:exon

position:900833:1
position: 900833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900912:1
position: 900912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:901270-901345:1:exon

position:901270:1
position: 901270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901345:1
position: 901345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:906390-906483:1:exon

position:906390:1
position: 906390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906483:1
position: 906483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:911710-912109:1:exon

position:911710:1
position: 911710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

snrpa1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: snrpa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 small nuclear ribonucleoprotein A'
translation: MECVEQFVRCLCFSRIGEGLEQALPNLRELVLTNNNLQELGDLDTLSTIKSLTFLSILRNPVTSKKHYRLYVIHKVPQVRVLDFQKVKLKERQEADRMFKGKRGAQLAKEITKKTKTFTPGAGLSGEKKKTGPSAPEVEAIKNAIANASTLAEVEKLKGMLQAGQIPGRDRKSGPTDEVEEEDMEEDPVTNGN
SIO_010081: snrpa1
subclass of: SO_0000673
so part of: snrpa1
location: join(887182..887301,891526..891572,893441..893543,900833..900912,901270..901345,906390..906483,911710..911771)
location: region:887182-911771:1
so has part: feature:887182-887301:1:exon
so has part: feature:891526-891572:1:exon
so has part: feature:893441-893543:1:exon
so has part: feature:900833-900912:1:exon
so has part: feature:901270-901345:1:exon
so has part: feature:906390-906483:1:exon
so has part: feature:911710-911771:1:exon

XP_020372363.2
type: Protein
SIO_000068: ncbiprotein

position:911771:1
position: 911771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887182-887301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891526-891572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893441-893543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900833-900912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901270-901345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906390-906483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:911710-911771:1:exon

selenos
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: selenos
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926238..945786
location: region:926238-945786:1
so has part: feature:926238-945786:1:exon
subclass of: SO_0000010

109917004
type: Gene
SIO_000068: ncbigene

position:926238:1
position: 926238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945786:1
position: 945786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926238-945786:1:exon

selenos
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: selenos
product: selenoprotein S
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 126 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_020516772.2
SIO_010081: selenos
subclass of: SO_0000673
so part of: selenos
location: join(926238..926368,927928..928071,943137..943243,943992..944081,945697..945786)
location: region:926238-945786:1
so has part: feature:926238-926368:1:exon
so has part: feature:927928-928071:1:exon
so has part: feature:943137-943243:1:exon
so has part: feature:943992-944081:1:exon
so has part: feature:945697-945786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926238-926368:1:exon

position:926368:1
position: 926368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927928-928071:1:exon

position:927928:1
position: 927928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928071:1
position: 928071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:943137-943243:1:exon

position:943137:1
position: 943137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943243:1
position: 943243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:943992-944081:1:exon

position:943992:1
position: 943992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944081:1
position: 944081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:945697-945786:1:exon

position:945697:1
position: 945697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

selenos
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: selenos
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenoprotein S
translation: MEEKSGSVLCSAGSGAMAEPEVARGLTQVLNILSEYGWYILFSCIAVYYILQRIKSVLQSRSHKQTQASEAQLEPSLIMRRQEAMDAARHRMQQELDAQAAKYREKQKEIEEEKRREKIEAWENMQEGKSSRKRTNMHPESESSTSSATKPKSDKKPLRGGEC
SIO_010081: selenos
subclass of: SO_0000673
so part of: selenos
location: join(926293..926368,927928..928071,943137..943243,943992..944081,945697..945771)
location: region:926293-945771:1
so has part: feature:926293-926368:1:exon
so has part: feature:927928-928071:1:exon
so has part: feature:943137-943243:1:exon
so has part: feature:943992-944081:1:exon
so has part: feature:945697-945771:1:exon

XP_020372361.2
type: Protein
SIO_000068: ncbiprotein

position:926293:1
position: 926293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945771:1
position: 945771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926293-926368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927928-928071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943137-943243:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:943992-944081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:945697-945771:1:exon

chsy1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: chsy1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(947167..980442)
location: region:947167-980442:-1
so has part: feature:947167-980442:-1:exon
subclass of: SO_0000010

109917003
type: Gene
SIO_000068: ncbigene

position:947167:-1
position: 947167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980442:-1
position: 980442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947167-980442:-1:exon

chsy1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: chsy1
product: chondroitin sulfate synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_020516771.2
SIO_010081: chsy1
subclass of: SO_0000673
so part of: chsy1
location: complement(join(947167..949894,979381..980442))
location: region:947167-980442:-1
so has part: feature:979381-980442:-1:exon
so has part: feature:947167-949894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979381-980442:-1:exon

position:979381:-1
position: 979381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:947167-949894:-1:exon

position:949894:-1
position: 949894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chsy1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: chsy1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate synthase 1
translation: MAPRSRHSWLGLFLGLVLGFALASRLLPPGAGPLSRLQQRRRGGGRGLVCGGHPGQGGGQVPPEKAEASDSRLVYVGVMSAKKYLRSRAIAAQRTWAQHIPGRVEFFSSEGSDLSLPLPLVALPGVDDSYPPQKKSFLMLKYMAERHLQAFEWFVRADDDTYIRGERLENFLRGLNSSQPLYLGQTGLGTPQELGKLALEPGENFCMGGPGVILSRELLRRVLPHIGQCLREMYTTHEDLEVGRCVRRFTGVQCAWSYEMQQLFYENYEQNKKGYIQDLHNSKIQRAITLHPNKSPEYQYRLHSYMLSRKIMELRYRTIQLHREIVLMGRYSNSKLHKDDLQLGIPPSFMRFQPQHREEVLEWEFLTGKYLYSAFDGQPPRRGMDSAQKEALDDIIMQVMEMINANAKSRGRIIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFAEREEIDARDLANTINSNSRSLSFFSNPLKIFAPFQLGTTKVGTKEPKDKKVNILVPLSGRFEMFARFMENFERTCLVSNQNVKLVILLFNSDSNPDKTKQVELLRDYQVKYPKAEVQLFPVASEFSRALALQLGAAQFSNDSLLLFCDVDLIFTVDFLQRCRDNALPGKGAYFPIIFTQYDPKIVHAGKVPNDNYAFTIQSGFWRNYGFGITCVYKSDLLLAGGFDVSIQGWGMEDVDLFNKFIEVGLKPFRSQEIGIVHVYHPIYCDPNLKAKQYKMCMASKASTYGSTQQLAELWLEKHRLNLSNSNHDDIKRTS
SIO_010081: chsy1
subclass of: SO_0000673
so part of: chsy1
location: complement(join(948308..949894,979381..980157))
location: region:948308-980157:-1
so has part: feature:979381-980157:-1:exon
so has part: feature:948308-949894:-1:exon

XP_020372360.1
type: Protein
SIO_000068: ncbiprotein

position:948308:-1
position: 948308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980157:-1
position: 980157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979381-980157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:948308-949894:-1:exon

lrrk1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: lrrk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1077520..1269293)
location: region:1077520-1269293:-1
so has part: feature:1077520-1269293:-1:exon
subclass of: SO_0000010

109917226
type: Gene
SIO_000068: ncbigene

position:1077520:-1
position: 1077520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269293:-1
position: 1269293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077520-1269293:-1:exon

lrrk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lrrk1
product: leucine-rich repeat kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615947.1
SIO_010081: lrrk1
subclass of: SO_0000673
so part of: lrrk1
location: complement(join(1077520..1078269,1097512..1098323,1106814..1106930,1108599..1108716,1110912..1111063,1119373..1119567,1123079..1123356,1123696..1123893,1125233..1125402,1130486..1130735,1133892..1134031,1134117..1134286,1136760..1136931,1142725..1143001,1143866..1144025,1146483..1146603,1149990..1150162,1156537..1156701,1158798..1159012,1159828..1159940,1160366..1160495,1166945..1167012,1168800..1168912,1170153..1170290,1174052..1174215,1174305..1174432,1177648..1177874,1190438..1190586,1193038..1193217,1195634..1195799,1216563..1216729,1248174..1248323,1269158..1269293))
location: region:1077520-1269293:-1
so has part: feature:1269158-1269293:-1:exon
so has part: feature:1248174-1248323:-1:exon
so has part: feature:1216563-1216729:-1:exon
so has part: feature:1195634-1195799:-1:exon
so has part: feature:1193038-1193217:-1:exon
so has part: feature:1190438-1190586:-1:exon
so has part: feature:1177648-1177874:-1:exon
so has part: feature:1174305-1174432:-1:exon
so has part: feature:1174052-1174215:-1:exon
so has part: feature:1170153-1170290:-1:exon
so has part: feature:1168800-1168912:-1:exon
so has part: feature:1166945-1167012:-1:exon
so has part: feature:1160366-1160495:-1:exon
so has part: feature:1159828-1159940:-1:exon
so has part: feature:1158798-1159012:-1:exon
so has part: feature:1156537-1156701:-1:exon
so has part: feature:1149990-1150162:-1:exon
so has part: feature:1146483-1146603:-1:exon
so has part: feature:1143866-1144025:-1:exon
so has part: feature:1142725-1143001:-1:exon
so has part: feature:1136760-1136931:-1:exon
so has part: feature:1134117-1134286:-1:exon
so has part: feature:1133892-1134031:-1:exon
so has part: feature:1130486-1130735:-1:exon
so has part: feature:1125233-1125402:-1:exon
so has part: feature:1123696-1123893:-1:exon
so has part: feature:1123079-1123356:-1:exon
so has part: feature:1119373-1119567:-1:exon
so has part: feature:1110912-1111063:-1:exon
so has part: feature:1108599-1108716:-1:exon
so has part: feature:1106814-1106930:-1:exon
so has part: feature:1097512-1098323:-1:exon
so has part: feature:1077520-1078269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269158-1269293:-1:exon

position:1269158:-1
position: 1269158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1248174-1248323:-1:exon

position:1248174:-1
position: 1248174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248323:-1
position: 1248323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1216563-1216729:-1:exon

position:1216563:-1
position: 1216563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216729:-1
position: 1216729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1195634-1195799:-1:exon

position:1195634:-1
position: 1195634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195799:-1
position: 1195799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1193038-1193217:-1:exon

position:1193038:-1
position: 1193038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193217:-1
position: 1193217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1190438-1190586:-1:exon

position:1190438:-1
position: 1190438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190586:-1
position: 1190586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1177648-1177874:-1:exon

position:1177648:-1
position: 1177648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177874:-1
position: 1177874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1174305-1174432:-1:exon

position:1174305:-1
position: 1174305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174432:-1
position: 1174432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1174052-1174215:-1:exon

position:1174052:-1
position: 1174052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174215:-1
position: 1174215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1170153-1170290:-1:exon

position:1170153:-1
position: 1170153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170290:-1
position: 1170290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1168800-1168912:-1:exon

position:1168800:-1
position: 1168800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168912:-1
position: 1168912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1166945-1167012:-1:exon

position:1166945:-1
position: 1166945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167012:-1
position: 1167012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1160366-1160495:-1:exon

position:1160366:-1
position: 1160366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160495:-1
position: 1160495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1159828-1159940:-1:exon

position:1159828:-1
position: 1159828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159940:-1
position: 1159940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1158798-1159012:-1:exon

position:1158798:-1
position: 1158798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159012:-1
position: 1159012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1156537-1156701:-1:exon

position:1156537:-1
position: 1156537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156701:-1
position: 1156701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1149990-1150162:-1:exon

position:1149990:-1
position: 1149990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150162:-1
position: 1150162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1146483-1146603:-1:exon

position:1146483:-1
position: 1146483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146603:-1
position: 1146603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1143866-1144025:-1:exon

position:1143866:-1
position: 1143866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144025:-1
position: 1144025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1142725-1143001:-1:exon

position:1142725:-1
position: 1142725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143001:-1
position: 1143001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1136760-1136931:-1:exon

position:1136760:-1
position: 1136760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136931:-1
position: 1136931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1134117-1134286:-1:exon

position:1134117:-1
position: 1134117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134286:-1
position: 1134286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1133892-1134031:-1:exon

position:1133892:-1
position: 1133892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134031:-1
position: 1134031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1130486-1130735:-1:exon

position:1130486:-1
position: 1130486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130735:-1
position: 1130735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1125233-1125402:-1:exon

position:1125233:-1
position: 1125233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125402:-1
position: 1125402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1123696-1123893:-1:exon

position:1123696:-1
position: 1123696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123893:-1
position: 1123893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1123079-1123356:-1:exon

position:1123079:-1
position: 1123079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123356:-1
position: 1123356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1119373-1119567:-1:exon

position:1119373:-1
position: 1119373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119567:-1
position: 1119567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1110912-1111063:-1:exon

position:1110912:-1
position: 1110912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111063:-1
position: 1111063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1108599-1108716:-1:exon

position:1108599:-1
position: 1108599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108716:-1
position: 1108716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1106814-1106930:-1:exon

position:1106814:-1
position: 1106814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106930:-1
position: 1106930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1097512-1098323:-1:exon

position:1097512:-1
position: 1097512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098323:-1
position: 1098323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1077520-1078269:-1:exon

position:1078269:-1
position: 1078269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrrk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lrrk1
product: leucine-rich repeat kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048615946.1
SIO_010081: lrrk1
subclass of: SO_0000673
so part of: lrrk1
location: complement(join(1077520..1078269,1079551..1079652,1097512..1098323,1106814..1106930,1108599..1108716,1110912..1111063,1119373..1119567,1123079..1123356,1123696..1123893,1125233..1125402,1130486..1130735,1133892..1134031,1134117..1134286,1136760..1136931,1142725..1143001,1143866..1144025,1146483..1146603,1149990..1150162,1156537..1156701,1158798..1159012,1159828..1159940,1160366..1160495,1166945..1167012,1168800..1168912,1170153..1170290,1174052..1174215,1174305..1174432,1177648..1177874,1190438..1190586,1193038..1193217,1195634..1195799,1216563..1216729,1248174..1248323,1269158..1269293))
location: region:1077520-1269293:-1
so has part: feature:1269158-1269293:-1:exon
so has part: feature:1248174-1248323:-1:exon
so has part: feature:1216563-1216729:-1:exon
so has part: feature:1195634-1195799:-1:exon
so has part: feature:1193038-1193217:-1:exon
so has part: feature:1190438-1190586:-1:exon
so has part: feature:1177648-1177874:-1:exon
so has part: feature:1174305-1174432:-1:exon
so has part: feature:1174052-1174215:-1:exon
so has part: feature:1170153-1170290:-1:exon
so has part: feature:1168800-1168912:-1:exon
so has part: feature:1166945-1167012:-1:exon
so has part: feature:1160366-1160495:-1:exon
so has part: feature:1159828-1159940:-1:exon
so has part: feature:1158798-1159012:-1:exon
so has part: feature:1156537-1156701:-1:exon
so has part: feature:1149990-1150162:-1:exon
so has part: feature:1146483-1146603:-1:exon
so has part: feature:1143866-1144025:-1:exon
so has part: feature:1142725-1143001:-1:exon
so has part: feature:1136760-1136931:-1:exon
so has part: feature:1134117-1134286:-1:exon
so has part: feature:1133892-1134031:-1:exon
so has part: feature:1130486-1130735:-1:exon
so has part: feature:1125233-1125402:-1:exon
so has part: feature:1123696-1123893:-1:exon
so has part: feature:1123079-1123356:-1:exon
so has part: feature:1119373-1119567:-1:exon
so has part: feature:1110912-1111063:-1:exon
so has part: feature:1108599-1108716:-1:exon
so has part: feature:1106814-1106930:-1:exon
so has part: feature:1097512-1098323:-1:exon
so has part: feature:1079551-1079652:-1:exon
so has part: feature:1077520-1078269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269158-1269293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248174-1248323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216563-1216729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195634-1195799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1193038-1193217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1190438-1190586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177648-1177874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174305-1174432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1174052-1174215:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170153-1170290:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1168800-1168912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1166945-1167012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1160366-1160495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1159828-1159940:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1158798-1159012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1156537-1156701:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1149990-1150162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1146483-1146603:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1143866-1144025:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1142725-1143001:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1136760-1136931:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1134117-1134286:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1133892-1134031:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1130486-1130735:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1125233-1125402:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1123696-1123893:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1123079-1123356:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1119373-1119567:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1110912-1111063:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1108599-1108716:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1106814-1106930:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1097512-1098323:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1079551-1079652:-1:exon

position:1079551:-1
position: 1079551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079652:-1
position: 1079652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1077520-1078269:-1:exon

lrrk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lrrk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat serine/threonine-protein kinase 1 isoform X2
translation: MYWDVGHEDNPEDNMAPGTDTVPEIMGSKQSGLGGLPIEQCPTLKNIQAAYSAGEVERAQQLARLHLEANYQVEKLLGVIAAHGDTEMLQYLLQETGMELSKELNDGNPAIIAAHQGHEEVIKVLLNSTSDLYVDKDLLNWMLAVACEKGHLDVVRLLVLVYKAETDSCGVKTQDHPIITGQPLYAAMKAGNEEIAGFLLDNGACFSSYVLLDHPELSNRLLRKQFTEPSSQYEVSDRQTGLSLKWSCLKLPWLELDWFIDVSNRITELDLCRNSLTFLPSVIPWGLVHLKKLNLSANQLKDLPNVTSSEEILCLGILEIDVSRNQLSCLPTGFLHLPKLEKLTAYANLLEMLFDEEKATNWIGLRKLQEIDVSDNKLQLLPSTFLHCCKSLSRLKASQNTLKDFPEPWACPLKFCNVSGNFLKSLPNTLSIFWKNYLKEANFSDNLLKDVPANIFELKNLSSLKLSGNQIQSLPPVDKWQCSNLKSLDLSRNHLGKSEEGVRTRKAFFTTWLKKTSDTVSPVEFPQFLGECLEVLHLDNNFLDSVPQSVCWLRSLSELYLSNNPGIRELPAELGQLANLWQLDIDQLNISNVPTEIRNEGPSSILTYLRAQLRKAEPCKLMKMIIVGPPRQGKSTLLETLQSGKPTQSMSKESSIQTTNWELLRPANVKTKVDSVVFNVWDVGGTAIMSTVNQCFFTDKALYVVVWNLALGEEAVANLQSWLLNIEAKAPNATVIVVGTHLDLIDTKFRSERIATLRAYVLALCRSPSGPRATGYPDISCRNLHEISCKTLDGLEGLRKLIFQVACSMKNTGNLTASQRLVGRLIPKSYFNLLNAVLKEQQRRSSSNEVQYLTDQQLEEIVQQTPDNDIKDFEDLQTAFSFLIETGALLHFPDTSHGLRNLYFLDPVWLSECLARIINVKASRVLAKNGIIQVTELRTLLVGTGFTEQTEEQYLQFLAKFEIALPITNNSYLLPHLLPSKPGFEFSNLRSKSTNTIQRLFKMNFVPVGFWQRFITRILISLAEMDAQLFENEKNPRRGRANRASVYSFTRSQRRNRCSTFRVRRNQTIYWQEGLQVNYDGGFLSVESSEVNWKRKKSAGIKIYCQSETRDFSAVAFITDHVNSLIDQWFPALTATDADGTPLVEQYVPCPHCTPTVTGQAEIHIQVHGQHYFSMEDCLLTAIKHTHIECPNHPTDPVSLEELVPELFMTDFPARLFLEMNCLEQSETTDNILGQGGSGTTVYKATYNAIPIAVKKFHFKKCGLQSDGINEDSMFRHLEAMEALRNFSEFRQEASMLHSMQHPCIVSLVGISIHPLCFALELAPLGSLNTVLTDYAKGASFIPLGHMLTHRIAYQIAVGLAYLHRKNIIFCDLKSDNVLVWTLDLTETVNVKLSDYGISRQSFHEGALGVEGTPGYQAPEVMPGIVYDEKVDMFSYGMVLYELLSGRRPVLGQHQLQIAKKLSKGVRPSLGALEQVQFHRMHNLMVECWDTKPEKRPGAGTALRLMQDPSFPAFMYMLRCGEQSSFCPSQELERTVIFWDEEGNDRNYSVVNIDKGLIEVDHISCPGIRLSCQLKLQSALWTATVDQKIQVYSLKGMCPLNVPLRVLDVPAVVTCFVPVSRGNQKSPVMLAGMADGMVAVYSLANEIPEGWCSYLCSRSANKFQFKISDNDLRQNAYPVTDMIAVNNGSEVWYSNGPGILIIDTLATEITRRLEPYQAPSQVISMTCNMGCNGEEAIWCLDDKTSTLIMYRSYQVCAHYTCSDCNPLRDMFPIQQPASFATTTAITPTDTTDSNSMDVSIIFNDEVGTQVIRHSDSMTDYCSLSSESHSCTNRNTRTSFSALSSPASPTSIPHSTDCESSLSHDRHGSISPSVHDIEQLQAVKILTVKDTLWIPRKLVDAAVVAKDTVVCCFQNDTRDWNLHVWRAWGSREFKLFYQSYEELARMEVSMRRRK
SIO_010081: lrrk1
subclass of: SO_0000673
so part of: lrrk1
location: complement(join(1078092..1078269,1097512..1098323,1106814..1106930,1108599..1108716,1110912..1111063,1119373..1119567,1123079..1123356,1123696..1123893,1125233..1125402,1130486..1130735,1133892..1134031,1134117..1134286,1136760..1136931,1142725..1143001,1143866..1144025,1146483..1146603,1149990..1150162,1156537..1156701,1158798..1159012,1159828..1159940,1160366..1160495,1166945..1167012,1168800..1168912,1170153..1170290,1174052..1174215,1174305..1174432,1177648..1177874,1190438..1190586,1193038..1193217,1195634..1195799,1216563..1216729,1248174..1248231))
location: region:1078092-1248231:-1
so has part: feature:1248174-1248231:-1:exon
so has part: feature:1216563-1216729:-1:exon
so has part: feature:1195634-1195799:-1:exon
so has part: feature:1193038-1193217:-1:exon
so has part: feature:1190438-1190586:-1:exon
so has part: feature:1177648-1177874:-1:exon
so has part: feature:1174305-1174432:-1:exon
so has part: feature:1174052-1174215:-1:exon
so has part: feature:1170153-1170290:-1:exon
so has part: feature:1168800-1168912:-1:exon
so has part: feature:1166945-1167012:-1:exon
so has part: feature:1160366-1160495:-1:exon
so has part: feature:1159828-1159940:-1:exon
so has part: feature:1158798-1159012:-1:exon
so has part: feature:1156537-1156701:-1:exon
so has part: feature:1149990-1150162:-1:exon
so has part: feature:1146483-1146603:-1:exon
so has part: feature:1143866-1144025:-1:exon
so has part: feature:1142725-1143001:-1:exon
so has part: feature:1136760-1136931:-1:exon
so has part: feature:1134117-1134286:-1:exon
so has part: feature:1133892-1134031:-1:exon
so has part: feature:1130486-1130735:-1:exon
so has part: feature:1125233-1125402:-1:exon
so has part: feature:1123696-1123893:-1:exon
so has part: feature:1123079-1123356:-1:exon
so has part: feature:1119373-1119567:-1:exon
so has part: feature:1110912-1111063:-1:exon
so has part: feature:1108599-1108716:-1:exon
so has part: feature:1106814-1106930:-1:exon
so has part: feature:1097512-1098323:-1:exon
so has part: feature:1078092-1078269:-1:exon

XP_048471904.1
type: Protein
SIO_000068: ncbiprotein

position:1078092:-1
position: 1078092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248231:-1
position: 1248231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248174-1248231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216563-1216729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195634-1195799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1193038-1193217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190438-1190586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1177648-1177874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174305-1174432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174052-1174215:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170153-1170290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1168800-1168912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1166945-1167012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1160366-1160495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1159828-1159940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1158798-1159012:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1156537-1156701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1149990-1150162:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1146483-1146603:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1143866-1144025:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1142725-1143001:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1136760-1136931:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1134117-1134286:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1133892-1134031:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1130486-1130735:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1125233-1125402:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1123696-1123893:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1123079-1123356:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1119373-1119567:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1110912-1111063:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1108599-1108716:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1106814-1106930:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1097512-1098323:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1078092-1078269:-1:exon

lrrk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lrrk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
translation: MYWDVGHEDNPEDNMAPGTDTVPEIMGSKQSGLGGLPIEQCPTLKNIQAAYSAGEVERAQQLARLHLEANYQVEKLLGVIAAHGDTEMLQYLLQETGMELSKELNDGNPAIIAAHQGHEEVIKVLLNSTSDLYVDKDLLNWMLAVACEKGHLDVVRLLVLVYKAETDSCGVKTQDHPIITGQPLYAAMKAGNEEIAGFLLDNGACFSSYVLLDHPELSNRLLRKQFTEPSSQYEVSDRQTGLSLKWSCLKLPWLELDWFIDVSNRITELDLCRNSLTFLPSVIPWGLVHLKKLNLSANQLKDLPNVTSSEEILCLGILEIDVSRNQLSCLPTGFLHLPKLEKLTAYANLLEMLFDEEKATNWIGLRKLQEIDVSDNKLQLLPSTFLHCCKSLSRLKASQNTLKDFPEPWACPLKFCNVSGNFLKSLPNTLSIFWKNYLKEANFSDNLLKDVPANIFELKNLSSLKLSGNQIQSLPPVDKWQCSNLKSLDLSRNHLGKSEEGVRTRKAFFTTWLKKTSDTVSPVEFPQFLGECLEVLHLDNNFLDSVPQSVCWLRSLSELYLSNNPGIRELPAELGQLANLWQLDIDQLNISNVPTEIRNEGPSSILTYLRAQLRKAEPCKLMKMIIVGPPRQGKSTLLETLQSGKPTQSMSKESSIQTTNWELLRPANVKTKVDSVVFNVWDVGGTAIMSTVNQCFFTDKALYVVVWNLALGEEAVANLQSWLLNIEAKAPNATVIVVGTHLDLIDTKFRSERIATLRAYVLALCRSPSGPRATGYPDISCRNLHEISCKTLDGLEGLRKLIFQVACSMKNTGNLTASQRLVGRLIPKSYFNLLNAVLKEQQRRSSSNEVQYLTDQQLEEIVQQTPDNDIKDFEDLQTAFSFLIETGALLHFPDTSHGLRNLYFLDPVWLSECLARIINVKASRVLAKNGIIQVTELRTLLVGTGFTEQTEEQYLQFLAKFEIALPITNNSYLLPHLLPSKPGFEFSNLRSKSTNTIQRLFKMNFVPVGFWQRFITRILISLAEMDAQLFENEKNPRRGRANRASVYSFTRSQRRNRCSTFRVRRNQTIYWQEGLQVNYDGGFLSVESSEVNWKRKKSAGIKIYCQSETRDFSAVAFITDHVNSLIDQWFPALTATDADGTPLVEQYVPCPHCTPTVTGQAEIHIQVHGQHYFSMEDCLLTAIKHTHIECPNHPTDPVSLEELVPELFMTDFPARLFLEMNCLEQSETTDNILGQGGSGTTVYKATYNAIPIAVKKFHFKKCGLQSDGINEDSMFRHLEAMEALRNFSEFRQEASMLHSMQHPCIVSLVGISIHPLCFALELAPLGSLNTVLTDYAKGASFIPLGHMLTHRIAYQIAVGLAYLHRKNIIFCDLKSDNVLVWTLDLTETVNVKLSDYGISRQSFHEGALGVEGTPGYQAPEVMPGIVYDEKVDMFSYGMVLYELLSGRRPVLGQHQLQIAKKLSKGVRPSLGALEQVQFHRMHNLMVECWDTKPEKRPGAGTALRLMQDPSFPAFMYMLRCGEQSSFCPSQELERTVIFWDEEGNDRNYSVVNIDKGLIEVDHISCPGIRLSCQLKLQSALWTATVDQKIQVYSLKGMCPLNVPLRVLDVPAVVTCFVPVSRGNQKSPVMLAGMADGMVAVYSLANEIPEGWCSYLCSRSANKFQFKISDNDLRQNAYPVTDMIAVNNGSEVWYSNGPGILIIDTLATEITRRLEPYQAPSQVISMTCNMGCNGEEAIWCLDDKTSTLIMYRSYQVCAHYTCSDCNPLRDMFPIQQPASFATTTAITPTDTTDSNSMDVSIIFNDEVGTQVIRHSDSMTDYCSLSSESHSCTNRNTRTSFSALSSPASPTSIPHSTDCESSLSHDRHGSISPSVHDIEQLQAVKILTVKDTLWIPRRGGDIIVIELENQSICQQGRVMAVLKPESAPEDRKLVDAAVVAKDTVVCCFQNDTRDWNLHVWRAWGSREFKLFYQSYEELARMEVSMRRRK
SIO_010081: lrrk1
subclass of: SO_0000673
so part of: lrrk1
location: complement(join(1078092..1078269,1079551..1079652,1097512..1098323,1106814..1106930,1108599..1108716,1110912..1111063,1119373..1119567,1123079..1123356,1123696..1123893,1125233..1125402,1130486..1130735,1133892..1134031,1134117..1134286,1136760..1136931,1142725..1143001,1143866..1144025,1146483..1146603,1149990..1150162,1156537..1156701,1158798..1159012,1159828..1159940,1160366..1160495,1166945..1167012,1168800..1168912,1170153..1170290,1174052..1174215,1174305..1174432,1177648..1177874,1190438..1190586,1193038..1193217,1195634..1195799,1216563..1216729,1248174..1248231))
location: region:1078092-1248231:-1
so has part: feature:1248174-1248231:-1:exon
so has part: feature:1216563-1216729:-1:exon
so has part: feature:1195634-1195799:-1:exon
so has part: feature:1193038-1193217:-1:exon
so has part: feature:1190438-1190586:-1:exon
so has part: feature:1177648-1177874:-1:exon
so has part: feature:1174305-1174432:-1:exon
so has part: feature:1174052-1174215:-1:exon
so has part: feature:1170153-1170290:-1:exon
so has part: feature:1168800-1168912:-1:exon
so has part: feature:1166945-1167012:-1:exon
so has part: feature:1160366-1160495:-1:exon
so has part: feature:1159828-1159940:-1:exon
so has part: feature:1158798-1159012:-1:exon
so has part: feature:1156537-1156701:-1:exon
so has part: feature:1149990-1150162:-1:exon
so has part: feature:1146483-1146603:-1:exon
so has part: feature:1143866-1144025:-1:exon
so has part: feature:1142725-1143001:-1:exon
so has part: feature:1136760-1136931:-1:exon
so has part: feature:1134117-1134286:-1:exon
so has part: feature:1133892-1134031:-1:exon
so has part: feature:1130486-1130735:-1:exon
so has part: feature:1125233-1125402:-1:exon
so has part: feature:1123696-1123893:-1:exon
so has part: feature:1123079-1123356:-1:exon
so has part: feature:1119373-1119567:-1:exon
so has part: feature:1110912-1111063:-1:exon
so has part: feature:1108599-1108716:-1:exon
so has part: feature:1106814-1106930:-1:exon
so has part: feature:1097512-1098323:-1:exon
so has part: feature:1079551-1079652:-1:exon
so has part: feature:1078092-1078269:-1:exon

XP_048471903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1248174-1248231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216563-1216729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195634-1195799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1193038-1193217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190438-1190586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1177648-1177874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174305-1174432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174052-1174215:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170153-1170290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1168800-1168912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1166945-1167012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1160366-1160495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1159828-1159940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1158798-1159012:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1156537-1156701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1149990-1150162:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1146483-1146603:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1143866-1144025:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1142725-1143001:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1136760-1136931:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1134117-1134286:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1133892-1134031:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1130486-1130735:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1125233-1125402:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1123696-1123893:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1123079-1123356:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1119373-1119567:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1110912-1111063:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1108599-1108716:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1106814-1106930:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1097512-1098323:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1079551-1079652:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1078092-1078269:-1:exon

lrrk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lrrk1
product: leucine-rich repeat kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615948.1
SIO_010081: lrrk1
subclass of: SO_0000673
so part of: lrrk1
location: complement(join(1089252..1089548,1097512..1098323,1106814..1106930,1108599..1108716,1110912..1111063,1119373..1119567,1123079..1123356,1123696..1123893,1125233..1125402,1130486..1130735,1133892..1134031,1134117..1134286,1136760..1136931,1142725..1143001,1143866..1144025,1146483..1146603,1149990..1150162,1156537..1156701,1158798..1159012,1159828..1159940,1160366..1160495,1166945..1167012,1168800..1168912,1170153..1170290,1174052..1174215,1174305..1174432,1177648..1177874,1190438..1190586,1193038..1193217,1195634..1195799,1216563..1216729,1248174..1248323,1269158..1269293))
location: region:1089252-1269293:-1
so has part: feature:1269158-1269293:-1:exon
so has part: feature:1248174-1248323:-1:exon
so has part: feature:1216563-1216729:-1:exon
so has part: feature:1195634-1195799:-1:exon
so has part: feature:1193038-1193217:-1:exon
so has part: feature:1190438-1190586:-1:exon
so has part: feature:1177648-1177874:-1:exon
so has part: feature:1174305-1174432:-1:exon
so has part: feature:1174052-1174215:-1:exon
so has part: feature:1170153-1170290:-1:exon
so has part: feature:1168800-1168912:-1:exon
so has part: feature:1166945-1167012:-1:exon
so has part: feature:1160366-1160495:-1:exon
so has part: feature:1159828-1159940:-1:exon
so has part: feature:1158798-1159012:-1:exon
so has part: feature:1156537-1156701:-1:exon
so has part: feature:1149990-1150162:-1:exon
so has part: feature:1146483-1146603:-1:exon
so has part: feature:1143866-1144025:-1:exon
so has part: feature:1142725-1143001:-1:exon
so has part: feature:1136760-1136931:-1:exon
so has part: feature:1134117-1134286:-1:exon
so has part: feature:1133892-1134031:-1:exon
so has part: feature:1130486-1130735:-1:exon
so has part: feature:1125233-1125402:-1:exon
so has part: feature:1123696-1123893:-1:exon
so has part: feature:1123079-1123356:-1:exon
so has part: feature:1119373-1119567:-1:exon
so has part: feature:1110912-1111063:-1:exon
so has part: feature:1108599-1108716:-1:exon
so has part: feature:1106814-1106930:-1:exon
so has part: feature:1097512-1098323:-1:exon
so has part: feature:1089252-1089548:-1:exon

position:1089252:-1
position: 1089252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269158-1269293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248174-1248323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216563-1216729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195634-1195799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1193038-1193217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1190438-1190586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177648-1177874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174305-1174432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1174052-1174215:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170153-1170290:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1168800-1168912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1166945-1167012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1160366-1160495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1159828-1159940:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1158798-1159012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1156537-1156701:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1149990-1150162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1146483-1146603:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1143866-1144025:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1142725-1143001:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1136760-1136931:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1134117-1134286:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1133892-1134031:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1130486-1130735:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1125233-1125402:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1123696-1123893:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1123079-1123356:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1119373-1119567:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1110912-1111063:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1108599-1108716:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1106814-1106930:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1097512-1098323:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1089252-1089548:-1:exon

position:1089548:-1
position: 1089548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrrk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lrrk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat serine/threonine-protein kinase 1 isoform X3
translation: MYWDVGHEDNPEDNMAPGTDTVPEIMGSKQSGLGGLPIEQCPTLKNIQAAYSAGEVERAQQLARLHLEANYQVEKLLGVIAAHGDTEMLQYLLQETGMELSKELNDGNPAIIAAHQGHEEVIKVLLNSTSDLYVDKDLLNWMLAVACEKGHLDVVRLLVLVYKAETDSCGVKTQDHPIITGQPLYAAMKAGNEEIAGFLLDNGACFSSYVLLDHPELSNRLLRKQFTEPSSQYEVSDRQTGLSLKWSCLKLPWLELDWFIDVSNRITELDLCRNSLTFLPSVIPWGLVHLKKLNLSANQLKDLPNVTSSEEILCLGILEIDVSRNQLSCLPTGFLHLPKLEKLTAYANLLEMLFDEEKATNWIGLRKLQEIDVSDNKLQLLPSTFLHCCKSLSRLKASQNTLKDFPEPWACPLKFCNVSGNFLKSLPNTLSIFWKNYLKEANFSDNLLKDVPANIFELKNLSSLKLSGNQIQSLPPVDKWQCSNLKSLDLSRNHLGKSEEGVRTRKAFFTTWLKKTSDTVSPVEFPQFLGECLEVLHLDNNFLDSVPQSVCWLRSLSELYLSNNPGIRELPAELGQLANLWQLDIDQLNISNVPTEIRNEGPSSILTYLRAQLRKAEPCKLMKMIIVGPPRQGKSTLLETLQSGKPTQSMSKESSIQTTNWELLRPANVKTKVDSVVFNVWDVGGTAIMSTVNQCFFTDKALYVVVWNLALGEEAVANLQSWLLNIEAKAPNATVIVVGTHLDLIDTKFRSERIATLRAYVLALCRSPSGPRATGYPDISCRNLHEISCKTLDGLEGLRKLIFQVACSMKNTGNLTASQRLVGRLIPKSYFNLLNAVLKEQQRRSSSNEVQYLTDQQLEEIVQQTPDNDIKDFEDLQTAFSFLIETGALLHFPDTSHGLRNLYFLDPVWLSECLARIINVKASRVLAKNGIIQVTELRTLLVGTGFTEQTEEQYLQFLAKFEIALPITNNSYLLPHLLPSKPGFEFSNLRSKSTNTIQRLFKMNFVPVGFWQRFITRILISLAEMDAQLFENEKNPRRGRANRASVYSFTRSQRRNRCSTFRVRRNQTIYWQEGLQVNYDGGFLSVESSEVNWKRKKSAGIKIYCQSETRDFSAVAFITDHVNSLIDQWFPALTATDADGTPLVEQYVPCPHCTPTVTGQAEIHIQVHGQHYFSMEDCLLTAIKHTHIECPNHPTDPVSLEELVPELFMTDFPARLFLEMNCLEQSETTDNILGQGGSGTTVYKATYNAIPIAVKKFHFKKCGLQSDGINEDSMFRHLEAMEALRNFSEFRQEASMLHSMQHPCIVSLVGISIHPLCFALELAPLGSLNTVLTDYAKGASFIPLGHMLTHRIAYQIAVGLAYLHRKNIIFCDLKSDNVLVWTLDLTETVNVKLSDYGISRQSFHEGALGVEGTPGYQAPEVMPGIVYDEKVDMFSYGMVLYELLSGRRPVLGQHQLQIAKKLSKGVRPSLGALEQVQFHRMHNLMVECWDTKPEKRPGAGTALRLMQDPSFPAFMYMLRCGEQSSFCPSQELERTVIFWDEEGNDRNYSVVNIDKGLIEVDHISCPGIRLSCQLKLQSALWTATVDQKIQVYSLKGMCPLNVPLRVLDVPAVVTCFVPVSRGNQKSPVMLAGMADGMVAVYSLANEIPEGWCSYLCSRSANKFQFKISDNDLRQNAYPVTDMIAVNNGSEVWYSNGPGILIIDTLATEITRRLEPYQAPSQVISMTCNMGCNGEEAIWCLDDKTSTLIMYRSYQVCAHYTCSDCNPLRDMFPIQQPASFATTTAITPTDTTDSNSMDVSIIFNDEVGTQVIRHSDSMTDYCSLSSESHSCTNRNTRTSFSALSSPASPTSIPHSTDCESSLSHDRHGSISPSVHDIEQLQAVKILTVKDTLWIPSENSFCLILCPAFSSF
SIO_010081: lrrk1
subclass of: SO_0000673
so part of: lrrk1
location: complement(join(1089500..1089548,1097512..1098323,1106814..1106930,1108599..1108716,1110912..1111063,1119373..1119567,1123079..1123356,1123696..1123893,1125233..1125402,1130486..1130735,1133892..1134031,1134117..1134286,1136760..1136931,1142725..1143001,1143866..1144025,1146483..1146603,1149990..1150162,1156537..1156701,1158798..1159012,1159828..1159940,1160366..1160495,1166945..1167012,1168800..1168912,1170153..1170290,1174052..1174215,1174305..1174432,1177648..1177874,1190438..1190586,1193038..1193217,1195634..1195799,1216563..1216729,1248174..1248231))
location: region:1089500-1248231:-1
so has part: feature:1248174-1248231:-1:exon
so has part: feature:1216563-1216729:-1:exon
so has part: feature:1195634-1195799:-1:exon
so has part: feature:1193038-1193217:-1:exon
so has part: feature:1190438-1190586:-1:exon
so has part: feature:1177648-1177874:-1:exon
so has part: feature:1174305-1174432:-1:exon
so has part: feature:1174052-1174215:-1:exon
so has part: feature:1170153-1170290:-1:exon
so has part: feature:1168800-1168912:-1:exon
so has part: feature:1166945-1167012:-1:exon
so has part: feature:1160366-1160495:-1:exon
so has part: feature:1159828-1159940:-1:exon
so has part: feature:1158798-1159012:-1:exon
so has part: feature:1156537-1156701:-1:exon
so has part: feature:1149990-1150162:-1:exon
so has part: feature:1146483-1146603:-1:exon
so has part: feature:1143866-1144025:-1:exon
so has part: feature:1142725-1143001:-1:exon
so has part: feature:1136760-1136931:-1:exon
so has part: feature:1134117-1134286:-1:exon
so has part: feature:1133892-1134031:-1:exon
so has part: feature:1130486-1130735:-1:exon
so has part: feature:1125233-1125402:-1:exon
so has part: feature:1123696-1123893:-1:exon
so has part: feature:1123079-1123356:-1:exon
so has part: feature:1119373-1119567:-1:exon
so has part: feature:1110912-1111063:-1:exon
so has part: feature:1108599-1108716:-1:exon
so has part: feature:1106814-1106930:-1:exon
so has part: feature:1097512-1098323:-1:exon
so has part: feature:1089500-1089548:-1:exon

XP_048471905.1
type: Protein
SIO_000068: ncbiprotein

position:1089500:-1
position: 1089500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248174-1248231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216563-1216729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195634-1195799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1193038-1193217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190438-1190586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1177648-1177874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174305-1174432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174052-1174215:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170153-1170290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1168800-1168912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1166945-1167012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1160366-1160495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1159828-1159940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1158798-1159012:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1156537-1156701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1149990-1150162:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1146483-1146603:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1143866-1144025:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1142725-1143001:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1136760-1136931:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1134117-1134286:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1133892-1134031:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1130486-1130735:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1125233-1125402:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1123696-1123893:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1123079-1123356:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1119373-1119567:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1110912-1111063:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1108599-1108716:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1106814-1106930:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1097512-1098323:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1089500-1089548:-1:exon

lrrk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lrrk1
product: leucine-rich repeat kinase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615949.1
SIO_010081: lrrk1
subclass of: SO_0000673
so part of: lrrk1
location: complement(join(1104809..1104878,1106814..1106930,1108599..1108716,1110912..1111063,1119373..1119567,1123079..1123356,1123696..1123893,1125233..1125402,1130486..1130735,1133892..1134031,1134117..1134286,1136760..1136931,1142725..1143001,1143866..1144025,1146483..1146603,1149990..1150162,1156537..1156701,1158798..1159012,1159828..1159940,1160366..1160495,1166945..1167012,1168800..1168912,1170153..1170290,1174052..1174215,1174305..1174432,1177648..1177874,1190438..1190586,1193038..1193217,1195634..1195799,1216563..1216729,1248174..1248323,1269158..1269293))
location: region:1104809-1269293:-1
so has part: feature:1269158-1269293:-1:exon
so has part: feature:1248174-1248323:-1:exon
so has part: feature:1216563-1216729:-1:exon
so has part: feature:1195634-1195799:-1:exon
so has part: feature:1193038-1193217:-1:exon
so has part: feature:1190438-1190586:-1:exon
so has part: feature:1177648-1177874:-1:exon
so has part: feature:1174305-1174432:-1:exon
so has part: feature:1174052-1174215:-1:exon
so has part: feature:1170153-1170290:-1:exon
so has part: feature:1168800-1168912:-1:exon
so has part: feature:1166945-1167012:-1:exon
so has part: feature:1160366-1160495:-1:exon
so has part: feature:1159828-1159940:-1:exon
so has part: feature:1158798-1159012:-1:exon
so has part: feature:1156537-1156701:-1:exon
so has part: feature:1149990-1150162:-1:exon
so has part: feature:1146483-1146603:-1:exon
so has part: feature:1143866-1144025:-1:exon
so has part: feature:1142725-1143001:-1:exon
so has part: feature:1136760-1136931:-1:exon
so has part: feature:1134117-1134286:-1:exon
so has part: feature:1133892-1134031:-1:exon
so has part: feature:1130486-1130735:-1:exon
so has part: feature:1125233-1125402:-1:exon
so has part: feature:1123696-1123893:-1:exon
so has part: feature:1123079-1123356:-1:exon
so has part: feature:1119373-1119567:-1:exon
so has part: feature:1110912-1111063:-1:exon
so has part: feature:1108599-1108716:-1:exon
so has part: feature:1106814-1106930:-1:exon
so has part: feature:1104809-1104878:-1:exon

position:1104809:-1
position: 1104809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269158-1269293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248174-1248323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216563-1216729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195634-1195799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1193038-1193217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1190438-1190586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177648-1177874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174305-1174432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1174052-1174215:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170153-1170290:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1168800-1168912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1166945-1167012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1160366-1160495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1159828-1159940:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1158798-1159012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1156537-1156701:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1149990-1150162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1146483-1146603:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1143866-1144025:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1142725-1143001:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1136760-1136931:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1134117-1134286:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1133892-1134031:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1130486-1130735:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1125233-1125402:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1123696-1123893:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1123079-1123356:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1119373-1119567:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1110912-1111063:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1108599-1108716:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1106814-1106930:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1104809-1104878:-1:exon

position:1104878:-1
position: 1104878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrrk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lrrk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat serine/threonine-protein kinase 1 isoform X4
translation: MYWDVGHEDNPEDNMAPGTDTVPEIMGSKQSGLGGLPIEQCPTLKNIQAAYSAGEVERAQQLARLHLEANYQVEKLLGVIAAHGDTEMLQYLLQETGMELSKELNDGNPAIIAAHQGHEEVIKVLLNSTSDLYVDKDLLNWMLAVACEKGHLDVVRLLVLVYKAETDSCGVKTQDHPIITGQPLYAAMKAGNEEIAGFLLDNGACFSSYVLLDHPELSNRLLRKQFTEPSSQYEVSDRQTGLSLKWSCLKLPWLELDWFIDVSNRITELDLCRNSLTFLPSVIPWGLVHLKKLNLSANQLKDLPNVTSSEEILCLGILEIDVSRNQLSCLPTGFLHLPKLEKLTAYANLLEMLFDEEKATNWIGLRKLQEIDVSDNKLQLLPSTFLHCCKSLSRLKASQNTLKDFPEPWACPLKFCNVSGNFLKSLPNTLSIFWKNYLKEANFSDNLLKDVPANIFELKNLSSLKLSGNQIQSLPPVDKWQCSNLKSLDLSRNHLGKSEEGVRTRKAFFTTWLKKTSDTVSPVEFPQFLGECLEVLHLDNNFLDSVPQSVCWLRSLSELYLSNNPGIRELPAELGQLANLWQLDIDQLNISNVPTEIRNEGPSSILTYLRAQLRKAEPCKLMKMIIVGPPRQGKSTLLETLQSGKPTQSMSKESSIQTTNWELLRPANVKTKVDSVVFNVWDVGGTAIMSTVNQCFFTDKALYVVVWNLALGEEAVANLQSWLLNIEAKAPNATVIVVGTHLDLIDTKFRSERIATLRAYVLALCRSPSGPRATGYPDISCRNLHEISCKTLDGLEGLRKLIFQVACSMKNTGNLTASQRLVGRLIPKSYFNLLNAVLKEQQRRSSSNEVQYLTDQQLEEIVQQTPDNDIKDFEDLQTAFSFLIETGALLHFPDTSHGLRNLYFLDPVWLSECLARIINVKASRVLAKNGIIQVTELRTLLVGTGFTEQTEEQYLQFLAKFEIALPITNNSYLLPHLLPSKPGFEFSNLRSKSTNTIQRLFKMNFVPVGFWQRFITRILISLAEMDAQLFENEKNPRRGRANRASVYSFTRSQRRNRCSTFRVRRNQTIYWQEGLQVNYDGGFLSVESSEVNWKRKKSAGIKIYCQSETRDFSAVAFITDHVNSLIDQWFPALTATDADGTPLVEQYVPCPHCTPTVTGQAEIHIQVHGQHYFSMEDCLLTAIKHTHIECPNHPTDPVSLEELVPELFMTDFPARLFLEMNCLEQSETTDNILGQGGSGTTVYKATYNAIPIAVKKFHFKKCGLQSDGINEDSMFRHLEAMEALRNFSEFRQEASMLHSMQHPCIVSLVGISIHPLCFALELAPLGSLNTVLTDYAKGASFIPLGHMLTHRIAYQIAVGLAYLHRKNIIFCDLKSDNVLVWTLDLTETVNVKLSDYGISRQSFHEGALGVEGTPGYQAPEVMPGIVYDEKVDMFSYGMVLYELLSGRRPVLGQHQLQIAKKLSKGVRPSLGALEQVQFHRMHNLMVECWDTKPEKRPGAGTALRLMQDPSFPAFMYMLRCGEQSSFCPSQELERTVIFWDEEGNDRNYSVVNIDKGLIEVDHISCPGIRLSCQLKLQSALWTATVDQKIQVYSLKGMCPLNVPLRVLDVPAVVTCFVPVSRGNQGHQVQTG
SIO_010081: lrrk1
subclass of: SO_0000673
so part of: lrrk1
location: complement(join(1104855..1104878,1106814..1106930,1108599..1108716,1110912..1111063,1119373..1119567,1123079..1123356,1123696..1123893,1125233..1125402,1130486..1130735,1133892..1134031,1134117..1134286,1136760..1136931,1142725..1143001,1143866..1144025,1146483..1146603,1149990..1150162,1156537..1156701,1158798..1159012,1159828..1159940,1160366..1160495,1166945..1167012,1168800..1168912,1170153..1170290,1174052..1174215,1174305..1174432,1177648..1177874,1190438..1190586,1193038..1193217,1195634..1195799,1216563..1216729,1248174..1248231))
location: region:1104855-1248231:-1
so has part: feature:1248174-1248231:-1:exon
so has part: feature:1216563-1216729:-1:exon
so has part: feature:1195634-1195799:-1:exon
so has part: feature:1193038-1193217:-1:exon
so has part: feature:1190438-1190586:-1:exon
so has part: feature:1177648-1177874:-1:exon
so has part: feature:1174305-1174432:-1:exon
so has part: feature:1174052-1174215:-1:exon
so has part: feature:1170153-1170290:-1:exon
so has part: feature:1168800-1168912:-1:exon
so has part: feature:1166945-1167012:-1:exon
so has part: feature:1160366-1160495:-1:exon
so has part: feature:1159828-1159940:-1:exon
so has part: feature:1158798-1159012:-1:exon
so has part: feature:1156537-1156701:-1:exon
so has part: feature:1149990-1150162:-1:exon
so has part: feature:1146483-1146603:-1:exon
so has part: feature:1143866-1144025:-1:exon
so has part: feature:1142725-1143001:-1:exon
so has part: feature:1136760-1136931:-1:exon
so has part: feature:1134117-1134286:-1:exon
so has part: feature:1133892-1134031:-1:exon
so has part: feature:1130486-1130735:-1:exon
so has part: feature:1125233-1125402:-1:exon
so has part: feature:1123696-1123893:-1:exon
so has part: feature:1123079-1123356:-1:exon
so has part: feature:1119373-1119567:-1:exon
so has part: feature:1110912-1111063:-1:exon
so has part: feature:1108599-1108716:-1:exon
so has part: feature:1106814-1106930:-1:exon
so has part: feature:1104855-1104878:-1:exon

XP_048471906.1
type: Protein
SIO_000068: ncbiprotein

position:1104855:-1
position: 1104855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248174-1248231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216563-1216729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195634-1195799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1193038-1193217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190438-1190586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1177648-1177874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174305-1174432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174052-1174215:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170153-1170290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1168800-1168912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1166945-1167012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1160366-1160495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1159828-1159940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1158798-1159012:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1156537-1156701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1149990-1150162:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1146483-1146603:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1143866-1144025:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1142725-1143001:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1136760-1136931:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1134117-1134286:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1133892-1134031:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1130486-1130735:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1125233-1125402:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1123696-1123893:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1123079-1123356:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1119373-1119567:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1110912-1111063:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1108599-1108716:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1106814-1106930:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1104855-1104878:-1:exon

aldh1a3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: aldh1a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1277231..1416266)
location: region:1277231-1416266:-1
so has part: feature:1277231-1416266:-1:exon
subclass of: SO_0000010

109936109
type: Gene
SIO_000068: ncbigene

position:1277231:-1
position: 1277231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416266:-1
position: 1416266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277231-1416266:-1:exon

aldh1a3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: aldh1a3
product: aldehyde dehydrogenase 1 family, member A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048615912.1
SIO_010081: aldh1a3
subclass of: SO_0000673
so part of: aldh1a3
location: complement(join(1277231..1277945,1289262..1289336,1294784..1294941,1295027..1295191,1302199..1302383,1304606..1304708,1307490..1307603,1346554..1346694,1390299..1390403,1416085..1416266))
location: region:1277231-1416266:-1
so has part: feature:1416085-1416266:-1:exon
so has part: feature:1390299-1390403:-1:exon
so has part: feature:1346554-1346694:-1:exon
so has part: feature:1307490-1307603:-1:exon
so has part: feature:1304606-1304708:-1:exon
so has part: feature:1302199-1302383:-1:exon
so has part: feature:1295027-1295191:-1:exon
so has part: feature:1294784-1294941:-1:exon
so has part: feature:1289262-1289336:-1:exon
so has part: feature:1277231-1277945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1416085-1416266:-1:exon

position:1416085:-1
position: 1416085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1390299-1390403:-1:exon

position:1390299:-1
position: 1390299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1390403:-1
position: 1390403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1346554-1346694:-1:exon

position:1346554:-1
position: 1346554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346694:-1
position: 1346694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1307490-1307603:-1:exon

position:1307490:-1
position: 1307490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307603:-1
position: 1307603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1304606-1304708:-1:exon

position:1304606:-1
position: 1304606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304708:-1
position: 1304708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1302199-1302383:-1:exon

position:1302199:-1
position: 1302199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302383:-1
position: 1302383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1295027-1295191:-1:exon

position:1295027:-1
position: 1295027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295191:-1
position: 1295191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1294784-1294941:-1:exon

position:1294784:-1
position: 1294784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294941:-1
position: 1294941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1289262-1289336:-1:exon

position:1289262:-1
position: 1289262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289336:-1
position: 1289336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1277231-1277945:-1:exon

position:1277945:-1
position: 1277945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

aldh1a3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: aldh1a3
product: aldehyde dehydrogenase 1 family, member A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048615911.1
SIO_010081: aldh1a3
subclass of: SO_0000673
so part of: aldh1a3
location: complement(join(1277231..1277945,1289262..1289336,1294784..1294941,1295027..1295191,1302199..1302383,1304606..1304708,1307490..1307603,1314294..1314422,1317067..1317128,1317294..1317423,1346554..1346694,1390299..1390403,1416085..1416266))
location: region:1277231-1416266:-1
so has part: feature:1416085-1416266:-1:exon
so has part: feature:1390299-1390403:-1:exon
so has part: feature:1346554-1346694:-1:exon
so has part: feature:1317294-1317423:-1:exon
so has part: feature:1317067-1317128:-1:exon
so has part: feature:1314294-1314422:-1:exon
so has part: feature:1307490-1307603:-1:exon
so has part: feature:1304606-1304708:-1:exon
so has part: feature:1302199-1302383:-1:exon
so has part: feature:1295027-1295191:-1:exon
so has part: feature:1294784-1294941:-1:exon
so has part: feature:1289262-1289336:-1:exon
so has part: feature:1277231-1277945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1416085-1416266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390299-1390403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1346554-1346694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1317294-1317423:-1:exon

position:1317294:-1
position: 1317294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1317423:-1
position: 1317423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1317067-1317128:-1:exon

position:1317067:-1
position: 1317067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1317128:-1
position: 1317128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1314294-1314422:-1:exon

position:1314294:-1
position: 1314294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314422:-1
position: 1314422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1307490-1307603:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1304606-1304708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1302199-1302383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295027-1295191:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1294784-1294941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1289262-1289336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1277231-1277945:-1:exon

aldh1a3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: aldh1a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aldehyde dehydrogenase family 1 member A3 isoform X2
translation: MFPNCVGAAIPSSGHRLSGKQRAPAMAENGLLDNGETERARESPARLPTATKPLAVKYTKIFINNEWHESVSRKKFAIFNPASGERICDVEEGDKPDVDKAVEAAREAFQPGSPWRNLDTSARGQLLYKWADLIERDRHILAVPFPPGVVNIVPGYGPTAGAAIACHKDIDKIAFTGSTEVGKSITEAASKSNLKRVTLELGGKNPCIVFADSDLSQAVDYASQGAFFNQGQCCTAAARVFVEEPIYDEFIRRSVERVKKRVVGNPFDPQTEQGPQIDQVHFDKIMELIESGKKEGAKLDAGGCAIGDVGHYIQPTVFSEVTDNMRIAKEEIFGPVQVIMKFKNTEEVVRRANSSEFGLTAGVFTRNINKALTVASALQSGTVWINCYNALHAQAPFGGFKMSGNGRELGEYGLREYTEVKTVTIKITQNDH
SIO_010081: aldh1a3
subclass of: SO_0000673
so part of: aldh1a3
location: complement(join(1277873..1277945,1289262..1289336,1294784..1294941,1295027..1295191,1302199..1302383,1304606..1304708,1307490..1307603,1346554..1346694,1390299..1390403,1416085..1416264))
location: region:1277873-1416264:-1
so has part: feature:1416085-1416264:-1:exon
so has part: feature:1390299-1390403:-1:exon
so has part: feature:1346554-1346694:-1:exon
so has part: feature:1307490-1307603:-1:exon
so has part: feature:1304606-1304708:-1:exon
so has part: feature:1302199-1302383:-1:exon
so has part: feature:1295027-1295191:-1:exon
so has part: feature:1294784-1294941:-1:exon
so has part: feature:1289262-1289336:-1:exon
so has part: feature:1277873-1277945:-1:exon

XP_048471869.1
type: Protein
SIO_000068: ncbiprotein

position:1277873:-1
position: 1277873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416264:-1
position: 1416264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1416085-1416264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390299-1390403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1346554-1346694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307490-1307603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1304606-1304708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1302199-1302383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295027-1295191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294784-1294941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1289262-1289336:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1277873-1277945:-1:exon

aldh1a3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: aldh1a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aldehyde dehydrogenase family 1 member A3 isoform X1
translation: MFPNCVGAAIPSSGHRLSGKQRAPAMAENGLLDNGETERARESPARLPTATKPLAVKYTKIFINNEWHESVSRKKFAIFNPASGERICDVEEGDKPDVDKAVEAAREAFQPGSPWRNLDTSARGQLLYKWADLIERDRHILATLETMDTGKPFLQSFAVDLEGCVRTLRYYAGWADKIHGQSIPVDGDFVMFTRHEPIGVCGQIIPWNFPLLMFIWKVAPAVCCGNTVVIKPAEQTPLTALYMGALIKEVPFPPGVVNIVPGYGPTAGAAIACHKDIDKIAFTGSTEVGKSITEAASKSNLKRVTLELGGKNPCIVFADSDLSQAVDYASQGAFFNQGQCCTAAARVFVEEPIYDEFIRRSVERVKKRVVGNPFDPQTEQGPQIDQVHFDKIMELIESGKKEGAKLDAGGCAIGDVGHYIQPTVFSEVTDNMRIAKEEIFGPVQVIMKFKNTEEVVRRANSSEFGLTAGVFTRNINKALTVASALQSGTVWINCYNALHAQAPFGGFKMSGNGRELGEYGLREYTEVKTVTIKITQNDH
SIO_010081: aldh1a3
subclass of: SO_0000673
so part of: aldh1a3
location: complement(join(1277873..1277945,1289262..1289336,1294784..1294941,1295027..1295191,1302199..1302383,1304606..1304708,1307490..1307603,1314294..1314422,1317067..1317128,1317294..1317423,1346554..1346694,1390299..1390403,1416085..1416264))
location: region:1277873-1416264:-1
so has part: feature:1416085-1416264:-1:exon
so has part: feature:1390299-1390403:-1:exon
so has part: feature:1346554-1346694:-1:exon
so has part: feature:1317294-1317423:-1:exon
so has part: feature:1317067-1317128:-1:exon
so has part: feature:1314294-1314422:-1:exon
so has part: feature:1307490-1307603:-1:exon
so has part: feature:1304606-1304708:-1:exon
so has part: feature:1302199-1302383:-1:exon
so has part: feature:1295027-1295191:-1:exon
so has part: feature:1294784-1294941:-1:exon
so has part: feature:1289262-1289336:-1:exon
so has part: feature:1277873-1277945:-1:exon

XP_048471868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1416085-1416264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390299-1390403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1346554-1346694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1317294-1317423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1317067-1317128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1314294-1314422:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307490-1307603:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1304606-1304708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1302199-1302383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295027-1295191:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1294784-1294941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1289262-1289336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1277873-1277945:-1:exon

asb7
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: asb7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1572130..1628593)
location: region:1572130-1628593:-1
so has part: feature:1572130-1628593:-1:exon
subclass of: SO_0000010

109925359
type: Gene
SIO_000068: ncbigene

position:1572130:-1
position: 1572130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1628593:-1
position: 1628593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572130-1628593:-1:exon

asb7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: asb7
product: ankyrin repeat and SOCS box containing 7, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616069.1
SIO_010081: asb7
subclass of: SO_0000673
so part of: asb7
location: complement(join(1572130..1575493,1579884..1580489,1593902..1594172,1598371..1598511,1628435..1628593))
location: region:1572130-1628593:-1
so has part: feature:1628435-1628593:-1:exon
so has part: feature:1598371-1598511:-1:exon
so has part: feature:1593902-1594172:-1:exon
so has part: feature:1579884-1580489:-1:exon
so has part: feature:1572130-1575493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1628435-1628593:-1:exon

position:1628435:-1
position: 1628435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1598371-1598511:-1:exon

position:1598371:-1
position: 1598371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598511:-1
position: 1598511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1593902-1594172:-1:exon

position:1593902:-1
position: 1593902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594172:-1
position: 1594172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1579884-1580489:-1:exon

position:1579884:-1
position: 1579884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580489:-1
position: 1580489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1572130-1575493:-1:exon

position:1575493:-1
position: 1575493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

asb7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: asb7
product: ankyrin repeat and SOCS box containing 7, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616071.1
SIO_010081: asb7
subclass of: SO_0000673
so part of: asb7
location: complement(join(1572130..1575493,1579884..1580489,1593902..1594092,1598371..1598511,1628435..1628582))
location: region:1572130-1628582:-1
so has part: feature:1628435-1628582:-1:exon
so has part: feature:1598371-1598511:-1:exon
so has part: feature:1593902-1594092:-1:exon
so has part: feature:1579884-1580489:-1:exon
so has part: feature:1572130-1575493:-1:exon

position:1628582:-1
position: 1628582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1628435-1628582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1598371-1598511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1593902-1594092:-1:exon

position:1594092:-1
position: 1594092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1579884-1580489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1572130-1575493:-1:exon

asb7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: asb7
product: ankyrin repeat and SOCS box containing 7, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616070.1
SIO_010081: asb7
subclass of: SO_0000673
so part of: asb7
location: complement(join(1572130..1575493,1579884..1580489,1593902..1594172,1598371..1598511,1628270..1628428))
location: region:1572130-1628428:-1
so has part: feature:1628270-1628428:-1:exon
so has part: feature:1598371-1598511:-1:exon
so has part: feature:1593902-1594172:-1:exon
so has part: feature:1579884-1580489:-1:exon
so has part: feature:1572130-1575493:-1:exon

position:1628428:-1
position: 1628428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1628270-1628428:-1:exon

position:1628270:-1
position: 1628270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1598371-1598511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1593902-1594172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1579884-1580489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1572130-1575493:-1:exon

asb7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: asb7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 7 isoform X1
translation: MFHHHCRRNPELQQELQIQNAVAAGDVHTVRKMLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEHRPDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRMEDGQTPLHLSALKDDVLCARMLHNYGADCNTRNYEGQTPLAVSVSLSGTSRPCLDFLQEVTRQPRSLQDLCRIRIRQCIGLQNLKGLDELPLAKVMKDYLKHKFDDI
SIO_010081: asb7
subclass of: SO_0000673
so part of: asb7
location: complement(join(1575354..1575493,1579884..1580489,1593902..1594112))
location: region:1575354-1594112:-1
so has part: feature:1593902-1594112:-1:exon
so has part: feature:1579884-1580489:-1:exon
so has part: feature:1575354-1575493:-1:exon

XP_048472026.1
type: Protein
SIO_000068: ncbiprotein

position:1575354:-1
position: 1575354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594112:-1
position: 1594112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593902-1594112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579884-1580489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575354-1575493:-1:exon

asb7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: asb7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 7 isoform X1
translation: MFHHHCRRNPELQQELQIQNAVAAGDVHTVRKMLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEHRPDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRMEDGQTPLHLSALKDDVLCARMLHNYGADCNTRNYEGQTPLAVSVSLSGTSRPCLDFLQEVTRQPRSLQDLCRIRIRQCIGLQNLKGLDELPLAKVMKDYLKHKFDDI
SIO_010081: asb7
subclass of: SO_0000673
so part of: asb7
location: complement(join(1575354..1575493,1579884..1580489,1593902..1594112))
location: region:1575354-1594112:-1
so has part: feature:1593902-1594112:-1:exon
so has part: feature:1579884-1580489:-1:exon
so has part: feature:1575354-1575493:-1:exon

XP_048472027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1593902-1594112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579884-1580489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575354-1575493:-1:exon

asb7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: asb7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 7 isoform X2
translation: MLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEHRPDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRMEDGQTPLHLSALKDDVLCARMLHNYGADCNTRNYEGQTPLAVSVSLSGTSRPCLDFLQEVTRQPRSLQDLCRIRIRQCIGLQNLKGLDELPLAKVMKDYLKHKFDDI
SIO_010081: asb7
subclass of: SO_0000673
so part of: asb7
location: complement(join(1575354..1575493,1579884..1580489,1593902..1594016))
location: region:1575354-1594016:-1
so has part: feature:1593902-1594016:-1:exon
so has part: feature:1579884-1580489:-1:exon
so has part: feature:1575354-1575493:-1:exon

XP_048472028.1
type: Protein
SIO_000068: ncbiprotein

position:1594016:-1
position: 1594016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593902-1594016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579884-1580489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575354-1575493:-1:exon

lins1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: lins1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1657793..1696666
location: region:1657793-1696666:1
so has part: feature:1657793-1696666:1:exon
subclass of: SO_0000010

109932633
type: Gene
SIO_000068: ncbigene

position:1657793:1
position: 1657793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696666:1
position: 1696666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657793-1696666:1:exon

lins1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lins1
product: lines homolog 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048616078.1
SIO_010081: lins1
subclass of: SO_0000673
so part of: lins1
location: join(1657793..1657978,1661121..1661555,1668699..1668788,1675989..1676130,1689726..1690343,1692042..1692234,1695552..1696660)
location: region:1657793-1696660:1
so has part: feature:1657793-1657978:1:exon
so has part: feature:1661121-1661555:1:exon
so has part: feature:1668699-1668788:1:exon
so has part: feature:1675989-1676130:1:exon
so has part: feature:1689726-1690343:1:exon
so has part: feature:1692042-1692234:1:exon
so has part: feature:1695552-1696660:1:exon

position:1696660:1
position: 1696660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657793-1657978:1:exon

position:1657978:1
position: 1657978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1661121-1661555:1:exon

position:1661121:1
position: 1661121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661555:1
position: 1661555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1668699-1668788:1:exon

position:1668699:1
position: 1668699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668788:1
position: 1668788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1675989-1676130:1:exon

position:1675989:1
position: 1675989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676130:1
position: 1676130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1689726-1690343:1:exon

position:1689726:1
position: 1689726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690343:1
position: 1690343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1692042-1692234:1:exon

position:1692042:1
position: 1692042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692234:1
position: 1692234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1695552-1696660:1:exon

position:1695552:1
position: 1695552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lins1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lins1
product: lines homolog 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048616080.1
SIO_010081: lins1
subclass of: SO_0000673
so part of: lins1
location: join(1657793..1657974,1661121..1661555,1668699..1668788,1675989..1676130,1689726..1690343,1692042..1692234,1695552..1696660)
location: region:1657793-1696660:1
so has part: feature:1657793-1657974:1:exon
so has part: feature:1661121-1661555:1:exon
so has part: feature:1668699-1668788:1:exon
so has part: feature:1675989-1676130:1:exon
so has part: feature:1689726-1690343:1:exon
so has part: feature:1692042-1692234:1:exon
so has part: feature:1695552-1696660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1657793-1657974:1:exon

position:1657974:1
position: 1657974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1661121-1661555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1668699-1668788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1675989-1676130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1689726-1690343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1692042-1692234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1695552-1696660:1:exon

lins1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lins1
product: lines homolog 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_020531783.2
SIO_010081: lins1
subclass of: SO_0000673
so part of: lins1
location: join(1657794..1657967,1661121..1661555,1668699..1668788,1675989..1676130,1689726..1690343,1692042..1692234,1695552..1696659)
location: region:1657794-1696659:1
so has part: feature:1657794-1657967:1:exon
so has part: feature:1661121-1661555:1:exon
so has part: feature:1668699-1668788:1:exon
so has part: feature:1675989-1676130:1:exon
so has part: feature:1689726-1690343:1:exon
so has part: feature:1692042-1692234:1:exon
so has part: feature:1695552-1696659:1:exon

position:1657794:1
position: 1657794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696659:1
position: 1696659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657794-1657967:1:exon

position:1657967:1
position: 1657967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1661121-1661555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1668699-1668788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1675989-1676130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1689726-1690343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1692042-1692234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1695552-1696659:1:exon

lins1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lins1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Lines homolog 1 isoform X1
translation: MMGKCLPSLHQFYKELLVEERPSKDIAELAALLSPSVCVDDPNINGDTNGTAEPSNKAYIYGDTVSADSRSMLHDSNCTPNDSQNEILLVQMSLIQIMCSKVHSEELNQDVRESYMKTIRILLEDMEILAKLVLLFGCPDKLLSHLAMKSVASLILVEILVMNRSVESWINGCLYTLSKNPGSSQAAEWVQTIAFVIKEVLKGKSLNKTVTIEKFLTPMDSVFGDLYSLMFTSYSGDCQTSGATAAPDTENIATTNQLVFVDLLKIFVTIRIQLKLNFSCLRILYLRTSQLLQHVVSSAHYIVKKRLLLLLKQCVLCHAGEDNVNDSSCATTERDSHMQHDLLAVSNAVLQALVSAQFRKLPVSPKPCFFGGNEMVGVADSNFGPDLVMIRAVCLILIKAMETKVQNRTFGVTEQGCLRAELQPCVSQLMTFLRMHFQCPVRSQQLSHPCVLVSLVFGEQDDDMVEAARALLTIYTSCYRSLDIYPQEKANNSCEACEHCFNPHCIFLLMLQSLAFDHSVLLDFLISSETCFLEYLVRYLRFLQEDWQPFCCICARFDTAAAESFCSSEINEVCVNFNFTPGVEQDRTNNQIVTENSKEAIVNPKAPHFLTPVRDPRNHVDTGKSSNTGCLMSSNMPWPRKQPQSLVDYESSEDSDNEVMEASSLNILSLEINQSIVMNNTFTSGETVKQAPETIRSKNVERNPRDINSHSCENNTKMSLEKIFNKSMSCLTELRKIISRLQRRNLFPYNATALLKLLIDIEIRSRRDDSILAKIPVINRSFDNPDTVSSNVIFY
SIO_010081: lins1
subclass of: SO_0000673
so part of: lins1
location: join(1661160..1661555,1668699..1668788,1675989..1676130,1689726..1690343,1692042..1692234,1695552..1696500)
location: region:1661160-1696500:1
so has part: feature:1661160-1661555:1:exon
so has part: feature:1668699-1668788:1:exon
so has part: feature:1675989-1676130:1:exon
so has part: feature:1689726-1690343:1:exon
so has part: feature:1692042-1692234:1:exon
so has part: feature:1695552-1696500:1:exon

XP_020387372.1
type: Protein
SIO_000068: ncbiprotein

position:1661160:1
position: 1661160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696500:1
position: 1696500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1661160-1661555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1668699-1668788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1675989-1676130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1689726-1690343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1692042-1692234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1695552-1696500:1:exon

lins1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lins1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Lines homolog 1 isoform X1
translation: MMGKCLPSLHQFYKELLVEERPSKDIAELAALLSPSVCVDDPNINGDTNGTAEPSNKAYIYGDTVSADSRSMLHDSNCTPNDSQNEILLVQMSLIQIMCSKVHSEELNQDVRESYMKTIRILLEDMEILAKLVLLFGCPDKLLSHLAMKSVASLILVEILVMNRSVESWINGCLYTLSKNPGSSQAAEWVQTIAFVIKEVLKGKSLNKTVTIEKFLTPMDSVFGDLYSLMFTSYSGDCQTSGATAAPDTENIATTNQLVFVDLLKIFVTIRIQLKLNFSCLRILYLRTSQLLQHVVSSAHYIVKKRLLLLLKQCVLCHAGEDNVNDSSCATTERDSHMQHDLLAVSNAVLQALVSAQFRKLPVSPKPCFFGGNEMVGVADSNFGPDLVMIRAVCLILIKAMETKVQNRTFGVTEQGCLRAELQPCVSQLMTFLRMHFQCPVRSQQLSHPCVLVSLVFGEQDDDMVEAARALLTIYTSCYRSLDIYPQEKANNSCEACEHCFNPHCIFLLMLQSLAFDHSVLLDFLISSETCFLEYLVRYLRFLQEDWQPFCCICARFDTAAAESFCSSEINEVCVNFNFTPGVEQDRTNNQIVTENSKEAIVNPKAPHFLTPVRDPRNHVDTGKSSNTGCLMSSNMPWPRKQPQSLVDYESSEDSDNEVMEASSLNILSLEINQSIVMNNTFTSGETVKQAPETIRSKNVERNPRDINSHSCENNTKMSLEKIFNKSMSCLTELRKIISRLQRRNLFPYNATALLKLLIDIEIRSRRDDSILAKIPVINRSFDNPDTVSSNVIFY
SIO_010081: lins1
subclass of: SO_0000673
so part of: lins1
location: join(1661160..1661555,1668699..1668788,1675989..1676130,1689726..1690343,1692042..1692234,1695552..1696500)
location: region:1661160-1696500:1
so has part: feature:1661160-1661555:1:exon
so has part: feature:1668699-1668788:1:exon
so has part: feature:1675989-1676130:1:exon
so has part: feature:1689726-1690343:1:exon
so has part: feature:1692042-1692234:1:exon
so has part: feature:1695552-1696500:1:exon

XP_048472035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1661160-1661555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1668699-1668788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1675989-1676130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1689726-1690343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1692042-1692234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1695552-1696500:1:exon

lins1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lins1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Lines homolog 1 isoform X1
translation: MMGKCLPSLHQFYKELLVEERPSKDIAELAALLSPSVCVDDPNINGDTNGTAEPSNKAYIYGDTVSADSRSMLHDSNCTPNDSQNEILLVQMSLIQIMCSKVHSEELNQDVRESYMKTIRILLEDMEILAKLVLLFGCPDKLLSHLAMKSVASLILVEILVMNRSVESWINGCLYTLSKNPGSSQAAEWVQTIAFVIKEVLKGKSLNKTVTIEKFLTPMDSVFGDLYSLMFTSYSGDCQTSGATAAPDTENIATTNQLVFVDLLKIFVTIRIQLKLNFSCLRILYLRTSQLLQHVVSSAHYIVKKRLLLLLKQCVLCHAGEDNVNDSSCATTERDSHMQHDLLAVSNAVLQALVSAQFRKLPVSPKPCFFGGNEMVGVADSNFGPDLVMIRAVCLILIKAMETKVQNRTFGVTEQGCLRAELQPCVSQLMTFLRMHFQCPVRSQQLSHPCVLVSLVFGEQDDDMVEAARALLTIYTSCYRSLDIYPQEKANNSCEACEHCFNPHCIFLLMLQSLAFDHSVLLDFLISSETCFLEYLVRYLRFLQEDWQPFCCICARFDTAAAESFCSSEINEVCVNFNFTPGVEQDRTNNQIVTENSKEAIVNPKAPHFLTPVRDPRNHVDTGKSSNTGCLMSSNMPWPRKQPQSLVDYESSEDSDNEVMEASSLNILSLEINQSIVMNNTFTSGETVKQAPETIRSKNVERNPRDINSHSCENNTKMSLEKIFNKSMSCLTELRKIISRLQRRNLFPYNATALLKLLIDIEIRSRRDDSILAKIPVINRSFDNPDTVSSNVIFY
SIO_010081: lins1
subclass of: SO_0000673
so part of: lins1
location: join(1661160..1661555,1668699..1668788,1675989..1676130,1689726..1690343,1692042..1692234,1695552..1696500)
location: region:1661160-1696500:1
so has part: feature:1661160-1661555:1:exon
so has part: feature:1668699-1668788:1:exon
so has part: feature:1675989-1676130:1:exon
so has part: feature:1689726-1690343:1:exon
so has part: feature:1692042-1692234:1:exon
so has part: feature:1695552-1696500:1:exon

XP_048472037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1661160-1661555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1668699-1668788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1675989-1676130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1689726-1690343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1692042-1692234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1695552-1696500:1:exon

lins1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lins1
product: lines homolog 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048616081.1
SIO_010081: lins1
subclass of: SO_0000673
so part of: lins1
location: join(1661444..1661555,1668195..1668289,1668699..1668788,1675989..1676130,1689726..1690343,1692042..1692234,1695552..1696666)
location: region:1661444-1696666:1
so has part: feature:1661444-1661555:1:exon
so has part: feature:1668195-1668289:1:exon
so has part: feature:1668699-1668788:1:exon
so has part: feature:1675989-1676130:1:exon
so has part: feature:1689726-1690343:1:exon
so has part: feature:1692042-1692234:1:exon
so has part: feature:1695552-1696666:1:exon

position:1661444:1
position: 1661444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1661444-1661555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1668195-1668289:1:exon

position:1668195:1
position: 1668195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668289:1
position: 1668289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1668699-1668788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1675989-1676130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1689726-1690343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1692042-1692234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1695552-1696666:1:exon

lins1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lins1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Lines homolog 1 isoform X2
translation: MKSVASLILVEILVMNRSVESWINGCLYTLSKNPGSSQAAEWVQTIAFVIKEVLKGKSLNKTVTIEKFLTPMDSVFGDLYSLMFTSYSGDCQTSGATAAPDTENIATTNQLVFVDLLKIFVTIRIQLKLNFSCLRILYLRTSQLLQHVVSSAHYIVKKRLLLLLKQCVLCHAGEDNVNDSSCATTERDSHMQHDLLAVSNAVLQALVSAQFRKLPVSPKPCFFGGNEMVGVADSNFGPDLVMIRAVCLILIKAMETKVQNRTFGVTEQGCLRAELQPCVSQLMTFLRMHFQCPVRSQQLSHPCVLVSLVFGEQDDDMVEAARALLTIYTSCYRSLDIYPQEKANNSCEACEHCFNPHCIFLLMLQSLAFDHSVLLDFLISSETCFLEYLVRYLRFLQEDWQPFCCICARFDTAAAESFCSSEINEVCVNFNFTPGVEQDRTNNQIVTENSKEAIVNPKAPHFLTPVRDPRNHVDTGKSSNTGCLMSSNMPWPRKQPQSLVDYESSEDSDNEVMEASSLNILSLEINQSIVMNNTFTSGETVKQAPETIRSKNVERNPRDINSHSCENNTKMSLEKIFNKSMSCLTELRKIISRLQRRNLFPYNATALLKLLIDIEIRSRRDDSILAKIPVINRSFDNPDTVSSNVIFY
SIO_010081: lins1
subclass of: SO_0000673
so part of: lins1
location: join(1668744..1668788,1675989..1676130,1689726..1690343,1692042..1692234,1695552..1696500)
location: region:1668744-1696500:1
so has part: feature:1668744-1668788:1:exon
so has part: feature:1675989-1676130:1:exon
so has part: feature:1689726-1690343:1:exon
so has part: feature:1692042-1692234:1:exon
so has part: feature:1695552-1696500:1:exon

XP_048472038.1
type: Protein
SIO_000068: ncbiprotein

position:1668744:1
position: 1668744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1668744-1668788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1675989-1676130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1689726-1690343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1692042-1692234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1695552-1696500:1:exon

cers3a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cers3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1709300..1796064
location: region:1709300-1796064:1
so has part: feature:1709300-1796064:1:exon
subclass of: SO_0000010

109932631
type: Gene
SIO_000068: ncbigene

position:1709300:1
position: 1709300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1796064:1
position: 1796064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1709300-1796064:1:exon

cers3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cers3a
product: ceramide synthase 3a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048615712.1
SIO_010081: cers3a
subclass of: SO_0000673
so part of: cers3a
location: join(1709300..1709321,1724251..1724424,1728766..1728883,1731569..1731687,1747343..1747400,1748864..1748914,1751986..1752078,1755737..1755865,1758749..1758855,1759810..1759963,1762086..1762143,1795754..1796064)
location: region:1709300-1796064:1
so has part: feature:1709300-1709321:1:exon
so has part: feature:1724251-1724424:1:exon
so has part: feature:1728766-1728883:1:exon
so has part: feature:1731569-1731687:1:exon
so has part: feature:1747343-1747400:1:exon
so has part: feature:1748864-1748914:1:exon
so has part: feature:1751986-1752078:1:exon
so has part: feature:1755737-1755865:1:exon
so has part: feature:1758749-1758855:1:exon
so has part: feature:1759810-1759963:1:exon
so has part: feature:1762086-1762143:1:exon
so has part: feature:1795754-1796064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1709300-1709321:1:exon

position:1709321:1
position: 1709321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1724251-1724424:1:exon

position:1724251:1
position: 1724251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724424:1
position: 1724424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1728766-1728883:1:exon

position:1728766:1
position: 1728766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728883:1
position: 1728883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1731569-1731687:1:exon

position:1731569:1
position: 1731569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1731687:1
position: 1731687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1747343-1747400:1:exon

position:1747343:1
position: 1747343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1747400:1
position: 1747400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1748864-1748914:1:exon

position:1748864:1
position: 1748864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1748914:1
position: 1748914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1751986-1752078:1:exon

position:1751986:1
position: 1751986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1752078:1
position: 1752078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1755737-1755865:1:exon

position:1755737:1
position: 1755737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1755865:1
position: 1755865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1758749-1758855:1:exon

position:1758749:1
position: 1758749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1758855:1
position: 1758855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1759810-1759963:1:exon

position:1759810:1
position: 1759810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1759963:1
position: 1759963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1762086-1762143:1:exon

position:1762086:1
position: 1762086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1762143:1
position: 1762143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1795754-1796064:1:exon

position:1795754:1
position: 1795754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cers3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cers3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 2
translation: MLQTLCDWFWWDHLWLPRNLTWADLEDREDFVYAKVSHLYVTVLYAALLMIVRHFFERLIATPLAKMLGVKDQIRLKVTYNVVLENFFVSTSKHPTRSQIEGLSKKCSWTVRMVERWLRRRRNQDRPSLMKKFREACWRCTFYLLAFIGGIAVLIDKPWFYDTWEVWVGYPKQTLLPSQYWYYITELSFYWSLLFSIASDVKRKDFKEQIIHHLATIILLSFSWCANYIRVGTLVMIVHDSSDILLESAKMLNYAGWKRVCNSLFIVFAVIFIITRLVIFPFWIIHCTWVYPVYHYPPFFGYYFFNVMLAVLQLLHIFWAYLILQMVAKFFSSKEHTEEEMRRAKGGYEMNLAGSSVICTDSTLKHAALQAISSSSSEEETTDLSENTLARLPPTLSTNANTDTPMSTLAQLESRAHSGEHITATSLQLAEVADIWRIDGDQTRAGEDPIMSTIHN
SIO_010081: cers3a
subclass of: SO_0000673
so part of: cers3a
location: join(1724252..1724424,1728766..1728883,1731569..1731687,1747343..1747400,1748864..1748914,1751986..1752078,1755737..1755865,1758749..1758855,1759810..1759963,1762086..1762143,1795754..1796064)
location: region:1724252-1796064:1
so has part: feature:1724252-1724424:1:exon
so has part: feature:1728766-1728883:1:exon
so has part: feature:1731569-1731687:1:exon
so has part: feature:1747343-1747400:1:exon
so has part: feature:1748864-1748914:1:exon
so has part: feature:1751986-1752078:1:exon
so has part: feature:1755737-1755865:1:exon
so has part: feature:1758749-1758855:1:exon
so has part: feature:1759810-1759963:1:exon
so has part: feature:1762086-1762143:1:exon
so has part: feature:1795754-1796064:1:exon

XP_048471669.1
type: Protein
SIO_000068: ncbiprotein

position:1724252:1
position: 1724252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724252-1724424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1728766-1728883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1731569-1731687:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1747343-1747400:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1748864-1748914:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1751986-1752078:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1755737-1755865:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1758749-1758855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1759810-1759963:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1762086-1762143:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1795754-1796064:1:exon

adamts17
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: adamts17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1895823..2297278
location: region:1895823-2297278:1
so has part: feature:1895823-2297278:1:exon
subclass of: SO_0000010

109937987
type: Gene
SIO_000068: ncbigene

position:1895823:1
position: 1895823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297278:1
position: 2297278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895823-2297278:1:exon

adamts17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: adamts17
product: ADAM metallopeptidase with thrombospondin type 1 motif, 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048615713.1
SIO_010081: adamts17
subclass of: SO_0000673
so part of: adamts17
location: join(1895823..1895835,1896205..1896368,1930329..1930412,1930893..1931047,1973767..1973810,2028403..2028508,2035728..2035874,2065692..2065842,2106120..2106221,2120437..2120582,2124005..2124171,2133478..2133605,2144710..2144830,2187032..2187112,2208574..2208602,2214978..2215137,2221659..2221794,2234619..2234823,2253074..2253226,2295971..2296148,2296844..2297278)
location: region:1895823-2297278:1
so has part: feature:1895823-1895835:1:exon
so has part: feature:1896205-1896368:1:exon
so has part: feature:1930329-1930412:1:exon
so has part: feature:1930893-1931047:1:exon
so has part: feature:1973767-1973810:1:exon
so has part: feature:2028403-2028508:1:exon
so has part: feature:2035728-2035874:1:exon
so has part: feature:2065692-2065842:1:exon
so has part: feature:2106120-2106221:1:exon
so has part: feature:2120437-2120582:1:exon
so has part: feature:2124005-2124171:1:exon
so has part: feature:2133478-2133605:1:exon
so has part: feature:2144710-2144830:1:exon
so has part: feature:2187032-2187112:1:exon
so has part: feature:2208574-2208602:1:exon
so has part: feature:2214978-2215137:1:exon
so has part: feature:2221659-2221794:1:exon
so has part: feature:2234619-2234823:1:exon
so has part: feature:2253074-2253226:1:exon
so has part: feature:2295971-2296148:1:exon
so has part: feature:2296844-2297278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1895823-1895835:1:exon

position:1895835:1
position: 1895835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1896205-1896368:1:exon

position:1896205:1
position: 1896205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896368:1
position: 1896368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1930329-1930412:1:exon

position:1930329:1
position: 1930329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1930412:1
position: 1930412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1930893-1931047:1:exon

position:1930893:1
position: 1930893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1931047:1
position: 1931047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1973767-1973810:1:exon

position:1973767:1
position: 1973767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1973810:1
position: 1973810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2028403-2028508:1:exon

position:2028403:1
position: 2028403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028508:1
position: 2028508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2035728-2035874:1:exon

position:2035728:1
position: 2035728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2035874:1
position: 2035874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2065692-2065842:1:exon

position:2065692:1
position: 2065692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065842:1
position: 2065842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2106120-2106221:1:exon

position:2106120:1
position: 2106120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2106221:1
position: 2106221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2120437-2120582:1:exon

position:2120437:1
position: 2120437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2120582:1
position: 2120582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2124005-2124171:1:exon

position:2124005:1
position: 2124005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2124171:1
position: 2124171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2133478-2133605:1:exon

position:2133478:1
position: 2133478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2133605:1
position: 2133605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2144710-2144830:1:exon

position:2144710:1
position: 2144710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2144830:1
position: 2144830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2187032-2187112:1:exon

position:2187032:1
position: 2187032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2187112:1
position: 2187112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2208574-2208602:1:exon

position:2208574:1
position: 2208574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2208602:1
position: 2208602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2214978-2215137:1:exon

position:2214978:1
position: 2214978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2215137:1
position: 2215137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2221659-2221794:1:exon

position:2221659:1
position: 2221659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2221794:1
position: 2221794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2234619-2234823:1:exon

position:2234619:1
position: 2234619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2234823:1
position: 2234823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2253074-2253226:1:exon

position:2253074:1
position: 2253074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2253226:1
position: 2253226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2295971-2296148:1:exon

position:2295971:1
position: 2295971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296148:1
position: 2296148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2296844-2297278:1:exon

position:2296844:1
position: 2296844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

adamts17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: adamts17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 17
translation: MANAGRKTLKKADGRRPRRNAIQLTNEYTVETLVVADSDMVEYHGAEAAQRFILTVMNMVYNMFQHHTLGIKINIRVTKLILLRNRPEELLIGHHGERSLESFCRWQHKEFGAKYLGNNHVPGGKDDFPAVDAAVFVTRTDFCVHKDEPCDTVGIGYLGGACSAKRKCVLAEDNGLNLAFTIAHELGHNLFGVFSRTSVSLASRACAAAVAKSQLLGESKALECGPSSERWRQCGDFRSKVSACLLETDPRSHYITRLPPKLPGMHYSADEQCQILFGANATFCKDMEHLMCAGLWCLVEGDKRCKTKLDPPLDGTECGVDKWCRAGECVSKTPIPEHVDGDWSTWNQWSMCSRTCGTGARFRQRKCDNPPPGPGGTNCQGASVEHIVCENLPCTKGLPSFRDQQCQSQDRQGHMKKKHWTAVLNDDDPCTLYCSSFGKESPVLVAERVLDGTPCGPYETDLCVNGKCKKIGCDGIIGSAAKEDRCGMCNGDDKSCKIIKGDFNQSRGMGYVEATVIPVGARRIRVVEEKPAHSFLDFRCVDDLEAVLLFHDQSYVIHYEYTILVNNSIESSDKVQKQLEPFYLWTNTGWGDCSVQCGGGERKTIVRCTKILNKTLEVANDSDCQNLTRPDPQVRKCNIHPCLSRWVGGEWTPCSSTCGKGTQFRNVTCVYQLQNGTYFKTRNLYCLGPKPSTVQGCEGRHCLTLWEASDWSKCSTDCGRGVHLRTVNCTSPQSKCDLATKPNEEEECEDHTNCYKWRTGEWSKCSSTCGKGLQSRVVQCMHRVTGRHGNECPTLSKPPAYKQCQQKPCNGNININTITSPSLAALTYKCTGDRWTVYCRVIREKNLCQDMRWYQRCCQTCRDFYANKQHHGS
SIO_010081: adamts17
subclass of: SO_0000673
so part of: adamts17
location: join(1895823..1895835,1896205..1896368,1930329..1930412,1930893..1931047,1973767..1973810,2028403..2028508,2035728..2035874,2065692..2065842,2106120..2106221,2120437..2120582,2124005..2124171,2133478..2133605,2144710..2144830,2187032..2187112,2208574..2208602,2214978..2215137,2221659..2221794,2234619..2234823,2253074..2253226,2295971..2296148,2296844..2296995)
location: region:1895823-2296995:1
so has part: feature:1895823-1895835:1:exon
so has part: feature:1896205-1896368:1:exon
so has part: feature:1930329-1930412:1:exon
so has part: feature:1930893-1931047:1:exon
so has part: feature:1973767-1973810:1:exon
so has part: feature:2028403-2028508:1:exon
so has part: feature:2035728-2035874:1:exon
so has part: feature:2065692-2065842:1:exon
so has part: feature:2106120-2106221:1:exon
so has part: feature:2120437-2120582:1:exon
so has part: feature:2124005-2124171:1:exon
so has part: feature:2133478-2133605:1:exon
so has part: feature:2144710-2144830:1:exon
so has part: feature:2187032-2187112:1:exon
so has part: feature:2208574-2208602:1:exon
so has part: feature:2214978-2215137:1:exon
so has part: feature:2221659-2221794:1:exon
so has part: feature:2234619-2234823:1:exon
so has part: feature:2253074-2253226:1:exon
so has part: feature:2295971-2296148:1:exon
so has part: feature:2296844-2296995:1:exon

XP_048471670.1
type: Protein
SIO_000068: ncbiprotein

position:2296995:1
position: 2296995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895823-1895835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1896205-1896368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1930329-1930412:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1930893-1931047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973767-1973810:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2028403-2028508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2035728-2035874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2065692-2065842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2106120-2106221:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2120437-2120582:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2124005-2124171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2133478-2133605:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2144710-2144830:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2187032-2187112:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2208574-2208602:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2214978-2215137:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2221659-2221794:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2234619-2234823:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2253074-2253226:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2295971-2296148:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2296844-2296995:1:exon

minar1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: minar1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2513005..2590592
location: region:2513005-2590592:1
so has part: feature:2513005-2590592:1:exon
subclass of: SO_0000010

109917694
type: Gene
SIO_000068: ncbigene

position:2513005:1
position: 2513005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590592:1
position: 2590592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2513005-2590592:1:exon

minar1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: minar1
product: membrane integral NOTCH2 associated receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048616120.1
SIO_010081: minar1
subclass of: SO_0000673
so part of: minar1
location: join(2513005..2515179,2552894..2553148,2590395..2590592)
location: region:2513005-2590592:1
so has part: feature:2513005-2515179:1:exon
so has part: feature:2552894-2553148:1:exon
so has part: feature:2590395-2590592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2513005-2515179:1:exon

position:2515179:1
position: 2515179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2552894-2553148:1:exon

position:2552894:1
position: 2552894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2553148:1
position: 2553148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2590395-2590592:1:exon

position:2590395:1
position: 2590395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

minar1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: minar1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major intrinsically disordered Notch2-binding receptor 1
translation: MEAAPEYSLFLVRILEELDTNHSTVSYQDLCKLLCARFDLTHLAKLRSLLFYTACLDPNFPATLFKEKLRCNVDSPQSKKIMIAADIVTMFNLIQMNGGVAKEKLPHRHQHKVRKNESFDGCRSDTEICQVRSPVSSHDSIDRDVCSEHSAAGDSNTCPTADIKDCQRLICTSDPNFFLGIRNEGIEENKGRAASLDRLQASPTFNSIDPQACVMQTTYFPMDPSQDSNSDQDSPSRKTDRNGTFDSSDEAFTISPCVHGRPVFNGELQDVLPCIAKFVPMDKESEDEDNGSHVRKNGSRFSTFFSNSFEMPYNSPYCDSMPFTSQEKRYVKHESLDDLQGSTYFGPSTISQEPRKLSSKPNKPTSWLLKSWSLNNETAQDCEQYFAGEKPNTHRYQSNVKEELLAEARQRQAAAAADAISTVDRAQAYFKQAAAGGEEALGSVGKPFNSKLATTGHCNQRNVKDKSVNCTSQVQSFEKTTSVGTQTEQSVRGKGKDGSHGHQPKYGEKVPLKHSDEDSEALSDDISDIFRFLDDMSVNGSTGLLQSCYNSSGSLTRLPKSDSGSLERTPVKANALQKDQGKGLLSKQPGDEELKMSVCKLVLRIGEIEKKLESLSGVRDEISQVLSKLNKLDQKIQEPAGEKLSPASNQESLRVKALRKNLFVRRSSKSLTEENSATESKIASISNSPRDWRVVGNSSEPGITLEEGKQQVVTDNKDWQRKTREVDRRYVISQSHRPSKPGKDSLLIEQVFSPHVYPNSMKSHMKSNPLYTDLRLTEVLEQKRPQPSWTIEEYNRNASEKDKSAVLDIQNQESLNPNNLEYWMEDIYTPGYDSLLKRKEAEFRRAKICKMAALIAAAVCTVVLVIVVPICTMKS
SIO_010081: minar1
subclass of: SO_0000673
so part of: minar1
location: join(2513005..2515179,2552894..2553148,2590395..2590592)
location: region:2513005-2590592:1
so has part: feature:2513005-2515179:1:exon
so has part: feature:2552894-2553148:1:exon
so has part: feature:2590395-2590592:1:exon

XP_048472077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2513005-2515179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2552894-2553148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2590395-2590592:1:exon

LOC125486834
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486834
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 2655236..2655348
location: region:2655236-2655348:1
so has part: feature:2655236-2655348:1:exon

125486834
type: Gene
SIO_000068: ncbigene

position:2655236:1
position: 2655236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2655348:1
position: 2655348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2655236-2655348:1:exon

LOC125486834
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125486834
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC125486834
subclass of: SO_0000673
so part of: LOC125486834
location: 2655236..2655348
location: region:2655236-2655348:1
so has part: feature:2655236-2655348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2655236-2655348:1:exon

LOC109921965
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109921965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2754890..2766944
location: region:2754890-2766944:1
so has part: feature:2754890-2766944:1:exon
subclass of: SO_0000010

109921965
type: Gene
SIO_000068: ncbigene

position:2754890:1
position: 2754890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766944:1
position: 2766944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2754890-2766944:1:exon

LOC109921965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109921965
product: complement C1q tumor necrosis factor-related protein 3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615913.1
SIO_010081: LOC109921965
subclass of: SO_0000673
so part of: LOC109921965
location: join(2754890..2754960,2761294..2761387,2765533..2766944)
location: region:2754890-2766944:1
so has part: feature:2754890-2754960:1:exon
so has part: feature:2761294-2761387:1:exon
so has part: feature:2765533-2766944:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2754890-2754960:1:exon

position:2754960:1
position: 2754960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2761294-2761387:1:exon

position:2761294:1
position: 2761294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2761387:1
position: 2761387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2765533-2766944:1:exon

position:2765533:1
position: 2765533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109921965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109921965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q tumor necrosis factor-related protein 3-like
translation: MESIQEDFQGAANEEMKPINLLKLITEAKARLGPTFTWNKELDVVYDVQRSTMNHVLTPVDPIVYDEVNVNLGQGYSNKTGKFTCPKCGLYFFCYSSLPGRGLLTDVALIKNNKMVTVIHSVLPINSSQLSIKTVILDLHKGDQVWVKLVSGSLWSRNGSLSFQGFLLTHSAQ
SIO_010081: LOC109921965
subclass of: SO_0000673
so part of: LOC109921965
location: join(2754934..2754960,2761294..2761387,2765533..2765933)
location: region:2754934-2765933:1
so has part: feature:2754934-2754960:1:exon
so has part: feature:2761294-2761387:1:exon
so has part: feature:2765533-2765933:1:exon

XP_048471870.1
type: Protein
SIO_000068: ncbiprotein

position:2754934:1
position: 2754934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2765933:1
position: 2765933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2754934-2754960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2761294-2761387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765533-2765933:1:exon

mthfs
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mthfs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2761232..2778355)
location: region:2761232-2778355:-1
so has part: feature:2761232-2778355:-1:exon
subclass of: SO_0000010

109921964
type: Gene
SIO_000068: ncbigene

position:2761232:-1
position: 2761232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2778355:-1
position: 2778355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2761232-2778355:-1:exon

mthfs
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mthfs
product: 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048615914.1
SIO_010081: mthfs
subclass of: SO_0000673
so part of: mthfs
location: complement(join(2761232..2761297,2774344..2774605,2778147..2778355))
location: region:2761232-2778355:-1
so has part: feature:2778147-2778355:-1:exon
so has part: feature:2774344-2774605:-1:exon
so has part: feature:2761232-2761297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2778147-2778355:-1:exon

position:2778147:-1
position: 2778147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2774344-2774605:-1:exon

position:2774344:-1
position: 2774344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2774605:-1
position: 2774605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2761232-2761297:-1:exon

position:2761297:-1
position: 2761297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mthfs
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mthfs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)
translation: MEGGGALLAPRPGNMAALRAAKKALRLEMKRKVAALSDAEKRRQTEAVSRRLIAHPKYQNCQRIAVFLSMSDEIQTEDIIKDVFQCGKECFIPRYKSGSNHMDMVKLGSAEEIHRLPLTSWSIRQPAEDGSLEEALTSAPWNKLKNWRK
SIO_010081: mthfs
subclass of: SO_0000673
so part of: mthfs
location: complement(join(2761263..2761297,2774344..2774605,2778147..2778299))
location: region:2761263-2778299:-1
so has part: feature:2778147-2778299:-1:exon
so has part: feature:2774344-2774605:-1:exon
so has part: feature:2761263-2761297:-1:exon

XP_048471871.1
type: Protein
SIO_000068: ncbiprotein

position:2761263:-1
position: 2761263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2778299:-1
position: 2778299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2778147-2778299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2774344-2774605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2761263-2761297:-1:exon

LOC109921963
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109921963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2800754..2801933)
location: region:2800754-2801933:-1
so has part: feature:2800754-2801933:-1:exon
subclass of: SO_0000010

109921963
type: Gene
SIO_000068: ncbigene

position:2800754:-1
position: 2800754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2801933:-1
position: 2801933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800754-2801933:-1:exon

LOC109921963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109921963
product: bcl-2-related protein A1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020521990.2
SIO_010081: LOC109921963
subclass of: SO_0000673
so part of: LOC109921963
location: complement(join(2800754..2801108,2801242..2801933))
location: region:2800754-2801933:-1
so has part: feature:2801242-2801933:-1:exon
so has part: feature:2800754-2801108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2801242-2801933:-1:exon

position:2801242:-1
position: 2801242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2800754-2801108:-1:exon

position:2801108:-1
position: 2801108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109921963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109921963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bcl-2-related protein A1-like
translation: MDHDSHSKQFVYVLVKDYLKFALDGSQSVPATSSAAETLRKAAALFQRVREHEFELYIKQLKLASIEDVKRAFPILMNEISSDGKDNWGRLVALYAFCGELARHLRRRGIPEEELVEDMAQCMAHHTWTLKAAWIQEKGGWEKGFVDYFKQENPGFVEYFRQKSPRFSYAKLAAVTGIIAAFSFVLYQH
SIO_010081: LOC109921963
subclass of: SO_0000673
so part of: LOC109921963
location: complement(join(2800962..2801108,2801242..2801664))
location: region:2800962-2801664:-1
so has part: feature:2801242-2801664:-1:exon
so has part: feature:2800962-2801108:-1:exon

XP_020377579.1
type: Protein
SIO_000068: ncbiprotein

position:2800962:-1
position: 2800962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2801664:-1
position: 2801664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2801242-2801664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2800962-2801108:-1:exon

zfand6
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2835733..2880834
location: region:2835733-2880834:1
so has part: feature:2835733-2880834:1:exon
subclass of: SO_0000010

109925123
type: Gene
SIO_000068: ncbigene

position:2835733:1
position: 2835733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2880834:1
position: 2880834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2835733-2880834:1:exon

zfand6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zfand6
product: zinc finger, AN1-type domain 6, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615842.1
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2835733..2836213,2836421..2836602,2842924..2843086,2845474..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2880834)
location: region:2835733-2880834:1
so has part: feature:2835733-2836213:1:exon
so has part: feature:2836421-2836602:1:exon
so has part: feature:2842924-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2880834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2835733-2836213:1:exon

position:2836213:1
position: 2836213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2836421-2836602:1:exon

position:2836421:1
position: 2836421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2836602:1
position: 2836602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2842924-2843086:1:exon

position:2842924:1
position: 2842924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843086:1
position: 2843086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2845474-2845585:1:exon

position:2845474:1
position: 2845474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2845585:1
position: 2845585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2849870-2849965:1:exon

position:2849870:1
position: 2849870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2849965:1
position: 2849965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2865446-2865555:1:exon

position:2865446:1
position: 2865446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2865555:1
position: 2865555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2869891-2870007:1:exon

position:2869891:1
position: 2869891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2870007:1
position: 2870007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2876028-2880834:1:exon

position:2876028:1
position: 2876028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zfand6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zfand6
product: zinc finger, AN1-type domain 6, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615847.1
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2835733..2836213,2836421..2836602,2842924..2843086,2845474..2845585,2865446..2865555,2869891..2870007,2876028..2880834)
location: region:2835733-2880834:1
so has part: feature:2835733-2836213:1:exon
so has part: feature:2836421-2836602:1:exon
so has part: feature:2842924-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2880834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2835733-2836213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2836421-2836602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842924-2843086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2876028-2880834:1:exon

zfand6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zfand6
product: zinc finger, AN1-type domain 6, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615846.1
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2835733..2836213,2836421..2836602,2842924..2843086,2845525..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2880834)
location: region:2835733-2880834:1
so has part: feature:2835733-2836213:1:exon
so has part: feature:2836421-2836602:1:exon
so has part: feature:2842924-2843086:1:exon
so has part: feature:2845525-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2880834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2835733-2836213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2836421-2836602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842924-2843086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2845525-2845585:1:exon

position:2845525:1
position: 2845525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2849870-2849965:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2876028-2880834:1:exon

zfand6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zfand6
product: zinc finger, AN1-type domain 6, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615850.1
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2835733..2836213,2836421..2836602,2842924..2843086,2845525..2845585,2865446..2865555,2869891..2870007,2876028..2880834)
location: region:2835733-2880834:1
so has part: feature:2835733-2836213:1:exon
so has part: feature:2836421-2836602:1:exon
so has part: feature:2842924-2843086:1:exon
so has part: feature:2845525-2845585:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2880834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2835733-2836213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2836421-2836602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842924-2843086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2845525-2845585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2876028-2880834:1:exon

zfand6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zfand6
product: zinc finger, AN1-type domain 6, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615843.1
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2835733..2836213,2836421..2836525,2837028..2837098,2842924..2843086,2845474..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2880834)
location: region:2835733-2880834:1
so has part: feature:2835733-2836213:1:exon
so has part: feature:2836421-2836525:1:exon
so has part: feature:2837028-2837098:1:exon
so has part: feature:2842924-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2880834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2835733-2836213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2836421-2836525:1:exon

position:2836525:1
position: 2836525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2837028-2837098:1:exon

position:2837028:1
position: 2837028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2837098:1
position: 2837098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2842924-2843086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2849870-2849965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2876028-2880834:1:exon

zfand6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zfand6
product: zinc finger, AN1-type domain 6, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615848.1
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2835733..2836213,2836421..2836525,2837028..2837098,2842924..2843086,2845474..2845585,2865446..2865555,2869891..2870007,2876028..2880834)
location: region:2835733-2880834:1
so has part: feature:2835733-2836213:1:exon
so has part: feature:2836421-2836525:1:exon
so has part: feature:2837028-2837098:1:exon
so has part: feature:2842924-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2880834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2835733-2836213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2836421-2836525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2837028-2837098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2842924-2843086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2876028-2880834:1:exon

zfand6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zfand6
product: zinc finger, AN1-type domain 6, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615844.1
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2835733..2836213,2836421..2836525,2842924..2843086,2845474..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2880834)
location: region:2835733-2880834:1
so has part: feature:2835733-2836213:1:exon
so has part: feature:2836421-2836525:1:exon
so has part: feature:2842924-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2880834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2835733-2836213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2836421-2836525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842924-2843086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2849870-2849965:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2876028-2880834:1:exon

zfand6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zfand6
product: zinc finger, AN1-type domain 6, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615845.1
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2836661..2836973,2842924..2843086,2845474..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2880834)
location: region:2836661-2880834:1
so has part: feature:2836661-2836973:1:exon
so has part: feature:2842924-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2880834:1:exon

position:2836661:1
position: 2836661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2836661-2836973:1:exon

position:2836973:1
position: 2836973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2842924-2843086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2849870-2849965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2876028-2880834:1:exon

zfand6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zfand6
product: zinc finger, AN1-type domain 6, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615849.1
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2836670..2836973,2842924..2843086,2845474..2845585,2865446..2865555,2869891..2870007,2876028..2880834)
location: region:2836670-2880834:1
so has part: feature:2836670-2836973:1:exon
so has part: feature:2842924-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2880834:1:exon

position:2836670:1
position: 2836670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2836670-2836973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842924-2843086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2876028-2880834:1:exon

zfand6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 6 isoform X1
translation: MAQETNQTQVPMLCTTGCGFYGNPRTNGMCSVCYKDFLQRQNNNGRISPVSPNLNSLTEVYPVHCTEENLPEIPSSFSSSSTSGQSSPQPIMGRGKRGRKQREKKGRSIKREGRKGRKRSVSNQLLLLSRESVTNPQSDGDHTEDNQAMTKKELQASTSEEIAQTSSDRQDKSPEKPKQKKNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHSCPYDYKADAAEKIRKENPVVVGEKIQKI
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2842939..2843086,2845474..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2876176)
location: region:2842939-2876176:1
so has part: feature:2842939-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2876176:1:exon

XP_048471799.1
type: Protein
SIO_000068: ncbiprotein

position:2842939:1
position: 2842939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876176:1
position: 2876176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2842939-2843086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849870-2849965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2876028-2876176:1:exon

zfand6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 6 isoform X1
translation: MAQETNQTQVPMLCTTGCGFYGNPRTNGMCSVCYKDFLQRQNNNGRISPVSPNLNSLTEVYPVHCTEENLPEIPSSFSSSSTSGQSSPQPIMGRGKRGRKQREKKGRSIKREGRKGRKRSVSNQLLLLSRESVTNPQSDGDHTEDNQAMTKKELQASTSEEIAQTSSDRQDKSPEKPKQKKNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHSCPYDYKADAAEKIRKENPVVVGEKIQKI
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2842939..2843086,2845474..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2876176)
location: region:2842939-2876176:1
so has part: feature:2842939-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2876176:1:exon

XP_048471800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2842939-2843086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849870-2849965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2876028-2876176:1:exon

zfand6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 6 isoform X1
translation: MAQETNQTQVPMLCTTGCGFYGNPRTNGMCSVCYKDFLQRQNNNGRISPVSPNLNSLTEVYPVHCTEENLPEIPSSFSSSSTSGQSSPQPIMGRGKRGRKQREKKGRSIKREGRKGRKRSVSNQLLLLSRESVTNPQSDGDHTEDNQAMTKKELQASTSEEIAQTSSDRQDKSPEKPKQKKNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHSCPYDYKADAAEKIRKENPVVVGEKIQKI
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2842939..2843086,2845474..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2876176)
location: region:2842939-2876176:1
so has part: feature:2842939-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2876176:1:exon

XP_048471801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2842939-2843086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849870-2849965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2876028-2876176:1:exon

zfand6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 6 isoform X1
translation: MAQETNQTQVPMLCTTGCGFYGNPRTNGMCSVCYKDFLQRQNNNGRISPVSPNLNSLTEVYPVHCTEENLPEIPSSFSSSSTSGQSSPQPIMGRGKRGRKQREKKGRSIKREGRKGRKRSVSNQLLLLSRESVTNPQSDGDHTEDNQAMTKKELQASTSEEIAQTSSDRQDKSPEKPKQKKNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHSCPYDYKADAAEKIRKENPVVVGEKIQKI
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2842939..2843086,2845474..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2876176)
location: region:2842939-2876176:1
so has part: feature:2842939-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2876176:1:exon

XP_048471802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2842939-2843086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849870-2849965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2876028-2876176:1:exon

zfand6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 6 isoform X3
translation: MAQETNQTQVPMLCTTGCGFYGNPRTNGMCSVCYKDFLQRQNNNGRISPVSPNLNSLTEVYPVHCTEENLPEIPSSFSSSSTSGQSRSVSNQLLLLSRESVTNPQSDGDHTEDNQAMTKKELQASTSEEIAQTSSDRQDKSPEKPKQKKNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHSCPYDYKADAAEKIRKENPVVVGEKIQKI
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2842939..2843086,2845474..2845585,2865446..2865555,2869891..2870007,2876028..2876176)
location: region:2842939-2876176:1
so has part: feature:2842939-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2876176:1:exon

XP_048471804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2842939-2843086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2876028-2876176:1:exon

zfand6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 6 isoform X3
translation: MAQETNQTQVPMLCTTGCGFYGNPRTNGMCSVCYKDFLQRQNNNGRISPVSPNLNSLTEVYPVHCTEENLPEIPSSFSSSSTSGQSRSVSNQLLLLSRESVTNPQSDGDHTEDNQAMTKKELQASTSEEIAQTSSDRQDKSPEKPKQKKNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHSCPYDYKADAAEKIRKENPVVVGEKIQKI
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2842939..2843086,2845474..2845585,2865446..2865555,2869891..2870007,2876028..2876176)
location: region:2842939-2876176:1
so has part: feature:2842939-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2876176:1:exon

XP_048471805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2842939-2843086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2876028-2876176:1:exon

zfand6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 6 isoform X3
translation: MAQETNQTQVPMLCTTGCGFYGNPRTNGMCSVCYKDFLQRQNNNGRISPVSPNLNSLTEVYPVHCTEENLPEIPSSFSSSSTSGQSRSVSNQLLLLSRESVTNPQSDGDHTEDNQAMTKKELQASTSEEIAQTSSDRQDKSPEKPKQKKNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHSCPYDYKADAAEKIRKENPVVVGEKIQKI
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2842939..2843086,2845474..2845585,2865446..2865555,2869891..2870007,2876028..2876176)
location: region:2842939-2876176:1
so has part: feature:2842939-2843086:1:exon
so has part: feature:2845474-2845585:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2876176:1:exon

XP_048471806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2842939-2843086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2845474-2845585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2876028-2876176:1:exon

zfand6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 6 isoform X2
translation: MAQETNQTQVPMLCTTGCGFYGNPRTNGMCSVCYKDFLQRQNNNGRISPEENLPEIPSSFSSSSTSGQSSPQPIMGRGKRGRKQREKKGRSIKREGRKGRKRSVSNQLLLLSRESVTNPQSDGDHTEDNQAMTKKELQASTSEEIAQTSSDRQDKSPEKPKQKKNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHSCPYDYKADAAEKIRKENPVVVGEKIQKI
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2842939..2843086,2845525..2845585,2849870..2849965,2865446..2865555,2869891..2870007,2876028..2876176)
location: region:2842939-2876176:1
so has part: feature:2842939-2843086:1:exon
so has part: feature:2845525-2845585:1:exon
so has part: feature:2849870-2849965:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2876176:1:exon

XP_048471803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2842939-2843086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2845525-2845585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849870-2849965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2876028-2876176:1:exon

zfand6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zfand6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 6 isoform X4
translation: MAQETNQTQVPMLCTTGCGFYGNPRTNGMCSVCYKDFLQRQNNNGRISPEENLPEIPSSFSSSSTSGQSRSVSNQLLLLSRESVTNPQSDGDHTEDNQAMTKKELQASTSEEIAQTSSDRQDKSPEKPKQKKNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHSCPYDYKADAAEKIRKENPVVVGEKIQKI
SIO_010081: zfand6
subclass of: SO_0000673
so part of: zfand6
location: join(2842939..2843086,2845525..2845585,2865446..2865555,2869891..2870007,2876028..2876176)
location: region:2842939-2876176:1
so has part: feature:2842939-2843086:1:exon
so has part: feature:2845525-2845585:1:exon
so has part: feature:2865446-2865555:1:exon
so has part: feature:2869891-2870007:1:exon
so has part: feature:2876028-2876176:1:exon

XP_048471807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2842939-2843086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2845525-2845585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2865446-2865555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2869891-2870007:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2876028-2876176:1:exon

fah
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: fah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2891133..2944438
location: region:2891133-2944438:1
so has part: feature:2891133-2944438:1:exon
subclass of: SO_0000010

109920804
type: Gene
SIO_000068: ncbigene

position:2891133:1
position: 2891133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2944438:1
position: 2944438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2891133-2944438:1:exon

fah
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: fah
product: fumarylacetoacetate hydrolase (fumarylacetoacetase)
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615860.1
SIO_010081: fah
subclass of: SO_0000673
so part of: fah
location: join(2891133..2891667,2896672..2896782,2900624..2900745,2904714..2904763,2908892..2908982,2911789..2911886,2913420..2913472,2916314..2916413,2919030..2919160,2921902..2921977,2929578..2929624,2932192..2932293,2937693..2937810,2939899..2944438)
location: region:2891133-2944438:1
so has part: feature:2891133-2891667:1:exon
so has part: feature:2896672-2896782:1:exon
so has part: feature:2900624-2900745:1:exon
so has part: feature:2904714-2904763:1:exon
so has part: feature:2908892-2908982:1:exon
so has part: feature:2911789-2911886:1:exon
so has part: feature:2913420-2913472:1:exon
so has part: feature:2916314-2916413:1:exon
so has part: feature:2919030-2919160:1:exon
so has part: feature:2921902-2921977:1:exon
so has part: feature:2929578-2929624:1:exon
so has part: feature:2932192-2932293:1:exon
so has part: feature:2937693-2937810:1:exon
so has part: feature:2939899-2944438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2891133-2891667:1:exon

position:2891667:1
position: 2891667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2896672-2896782:1:exon

position:2896672:1
position: 2896672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2896782:1
position: 2896782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2900624-2900745:1:exon

position:2900624:1
position: 2900624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900745:1
position: 2900745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2904714-2904763:1:exon

position:2904714:1
position: 2904714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904763:1
position: 2904763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2908892-2908982:1:exon

position:2908892:1
position: 2908892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2908982:1
position: 2908982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2911789-2911886:1:exon

position:2911789:1
position: 2911789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2911886:1
position: 2911886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2913420-2913472:1:exon

position:2913420:1
position: 2913420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2913472:1
position: 2913472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2916314-2916413:1:exon

position:2916314:1
position: 2916314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2916413:1
position: 2916413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2919030-2919160:1:exon

position:2919030:1
position: 2919030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2919160:1
position: 2919160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2921902-2921977:1:exon

position:2921902:1
position: 2921902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2921977:1
position: 2921977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2929578-2929624:1:exon

position:2929578:1
position: 2929578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2929624:1
position: 2929624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2932192-2932293:1:exon

position:2932192:1
position: 2932192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2932293:1
position: 2932293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2937693-2937810:1:exon

position:2937693:1
position: 2937693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937810:1
position: 2937810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2939899-2944438:1:exon

position:2939899:1
position: 2939899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fah
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: fah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fumarylacetoacetase
translation: MSFLKVEEDSDFPIQNLPFGVFSTPDNPTHRIGVAIGDQILDLSVVKHLFTGSALSKHQHVFAQPILNPFMALGREAWREARAFLQQLLSAGEATLRDNKELRQKAFVPQASATMHLPAQIGDYTDFYSSLHHATNVGTMFRGKDNALMPNWLHLPVAYNGRASSVIVSGTPIRRPMGQTRSDETKPPVFGASKLLDFELEMAFFVGPGTKLGERIDISRAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISPWVVSMEALSPFIVANPVQDPKPLPYLYSDDSYTFDINLLVSIKGEAMTEKATICRSNLKHMYWTMKQQLAHHTVNGCNVRPGDLLASGTISGPTPESFGSMLELSWKGTKIIDLGNGNTRKFLQDGDEVTLTGYCQGNGYRIGFGECTGKVLPAIL
SIO_010081: fah
subclass of: SO_0000673
so part of: fah
location: join(2891587..2891667,2896672..2896782,2900624..2900745,2904714..2904763,2908892..2908982,2911789..2911886,2913420..2913472,2916314..2916413,2919030..2919160,2921902..2921977,2929578..2929624,2932192..2932293,2937693..2937810,2939899..2939972)
location: region:2891587-2939972:1
so has part: feature:2891587-2891667:1:exon
so has part: feature:2896672-2896782:1:exon
so has part: feature:2900624-2900745:1:exon
so has part: feature:2904714-2904763:1:exon
so has part: feature:2908892-2908982:1:exon
so has part: feature:2911789-2911886:1:exon
so has part: feature:2913420-2913472:1:exon
so has part: feature:2916314-2916413:1:exon
so has part: feature:2919030-2919160:1:exon
so has part: feature:2921902-2921977:1:exon
so has part: feature:2929578-2929624:1:exon
so has part: feature:2932192-2932293:1:exon
so has part: feature:2937693-2937810:1:exon
so has part: feature:2939899-2939972:1:exon

XP_048471817.1
type: Protein
SIO_000068: ncbiprotein

position:2891587:1
position: 2891587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2939972:1
position: 2939972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2891587-2891667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2896672-2896782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2900624-2900745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2904714-2904763:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2908892-2908982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2911789-2911886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2913420-2913472:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2916314-2916413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2919030-2919160:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2921902-2921977:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2929578-2929624:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2932192-2932293:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937693-2937810:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2939899-2939972:1:exon

LOC125486818
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2977899..3027616)
location: region:2977899-3027616:-1
so has part: feature:2977899-3027616:-1:exon
subclass of: SO_0000010

125486818
type: Gene
SIO_000068: ncbigene

position:2977899:-1
position: 2977899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027616:-1
position: 3027616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2977899-3027616:-1:exon

LOC125486818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125486818
product: cortexin domain-containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048616089.1
SIO_010081: LOC125486818
subclass of: SO_0000673
so part of: LOC125486818
location: complement(join(2977899..2978979,3027168..3027378,3027458..3027616))
location: region:2977899-3027616:-1
so has part: feature:3027458-3027616:-1:exon
so has part: feature:3027168-3027378:-1:exon
so has part: feature:2977899-2978979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3027458-3027616:-1:exon

position:3027458:-1
position: 3027458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3027168-3027378:-1:exon

position:3027168:-1
position: 3027168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027378:-1
position: 3027378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2977899-2978979:-1:exon

position:2978979:-1
position: 2978979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125486818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125486818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cortexin domain-containing 1
translation: MENATPEPMYVDVDKGLTLACFVLLCLFLIMMIIRCAKVIMDPYSAIPTSTWEEQHLDD
SIO_010081: LOC125486818
subclass of: SO_0000673
so part of: LOC125486818
location: complement(2978746..2978925)
location: region:2978746-2978925:-1
so has part: feature:2978746-2978925:-1:exon

XP_048472046.1
type: Protein
SIO_000068: ncbiprotein

position:2978746:-1
position: 2978746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2978925:-1
position: 2978925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2978746-2978925:-1:exon

arnt2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: arnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3125898..3473782
location: region:3125898-3473782:1
so has part: feature:3125898-3473782:1:exon
subclass of: SO_0000010

109917408
type: Gene
SIO_000068: ncbigene

position:3125898:1
position: 3125898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3473782:1
position: 3473782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3125898-3473782:1:exon

arnt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: arnt2
product: aryl-hydrocarbon receptor nuclear translocator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048616062.1
SIO_010081: arnt2
subclass of: SO_0000673
so part of: arnt2
location: join(3125898..3126047,3162672..3162719,3181244..3181457,3184270..3184483,3252353..3252455,3275182..3275247,3276023..3276108,3322531..3322607,3336402..3336536,3337136..3337210,3362845..3362996,3373964..3374039,3374256..3374379,3401515..3401614,3405766..3405907,3425887..3426055,3468306..3468451,3470338..3473782)
location: region:3125898-3473782:1
so has part: feature:3125898-3126047:1:exon
so has part: feature:3162672-3162719:1:exon
so has part: feature:3181244-3181457:1:exon
so has part: feature:3184270-3184483:1:exon
so has part: feature:3252353-3252455:1:exon
so has part: feature:3275182-3275247:1:exon
so has part: feature:3276023-3276108:1:exon
so has part: feature:3322531-3322607:1:exon
so has part: feature:3336402-3336536:1:exon
so has part: feature:3337136-3337210:1:exon
so has part: feature:3362845-3362996:1:exon
so has part: feature:3373964-3374039:1:exon
so has part: feature:3374256-3374379:1:exon
so has part: feature:3401515-3401614:1:exon
so has part: feature:3405766-3405907:1:exon
so has part: feature:3425887-3426055:1:exon
so has part: feature:3468306-3468451:1:exon
so has part: feature:3470338-3473782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3125898-3126047:1:exon

position:3126047:1
position: 3126047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3162672-3162719:1:exon

position:3162672:1
position: 3162672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3162719:1
position: 3162719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3181244-3181457:1:exon

position:3181244:1
position: 3181244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3181457:1
position: 3181457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3184270-3184483:1:exon

position:3184270:1
position: 3184270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3184483:1
position: 3184483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3252353-3252455:1:exon

position:3252353:1
position: 3252353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3252455:1
position: 3252455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3275182-3275247:1:exon

position:3275182:1
position: 3275182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3275247:1
position: 3275247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3276023-3276108:1:exon

position:3276023:1
position: 3276023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3276108:1
position: 3276108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3322531-3322607:1:exon

position:3322531:1
position: 3322531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3322607:1
position: 3322607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3336402-3336536:1:exon

position:3336402:1
position: 3336402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3336536:1
position: 3336536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3337136-3337210:1:exon

position:3337136:1
position: 3337136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3337210:1
position: 3337210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3362845-3362996:1:exon

position:3362845:1
position: 3362845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3362996:1
position: 3362996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3373964-3374039:1:exon

position:3373964:1
position: 3373964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3374039:1
position: 3374039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3374256-3374379:1:exon

position:3374256:1
position: 3374256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3374379:1
position: 3374379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3401515-3401614:1:exon

position:3401515:1
position: 3401515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3401614:1
position: 3401614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3405766-3405907:1:exon

position:3405766:1
position: 3405766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3405907:1
position: 3405907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3425887-3426055:1:exon

position:3425887:1
position: 3425887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3426055:1
position: 3426055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3468306-3468451:1:exon

position:3468306:1
position: 3468306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3468451:1
position: 3468451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3470338-3473782:1:exon

position:3470338:1
position: 3470338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

arnt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: arnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator 2
translation: MAAEMSSEVPEPVALTAPNNPVTPGPGQVRVIGAVPARGGKRRSGLEFDDEDGEGPSKFSRENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGAYKPSFLTEKELKHLILEAADGFLFVAAAETGRIIYVSDSVTPVLNHPQSEWFGSTLYDQVHPDDVEKLREQLSTSESSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGTAPLEHISLSRLTVLRKRYRNGLGPVKEGESQYSVVHCTGYIKAWPPAGMTLPEEESDGGQSSKFCLVAIGRLQVTSSPVCMDMNGLAIPTEFLSRHNSDGLFTFVDHRCITVIGYQPQELLGKDIVEYCHPEDQSHVRDSFQQVVKLKGQVLSVMYRFRTKSRDWLWIRTSSFTFQNPYSDEIEYIICTNTNVKQLQQQQQAELEVGPREGLPSYDPSQVPVATVSAGVQEHGKSIDKTDPLFSQDRDPRFTDIYTGISPGEKKTMSTASAAGSQQIYSQGGSFQPGRTGQTFSTSMVPGGNIIQQTSSAGQILAQISRQSNANQVSATSWTGSRPPFPGQQVTSQTGKAQSPPFAIGSSHTFPADPSTFSPLSSPVSTSSPGGPSYTSLANRSTGFAESGQSSGQFQGRSSEGSAVWSQWQGQHHNQQASEQHTHQQPGQPEVFQDMLSMLGDPTQGTGNYNNEDFADLSMFPSFSE
SIO_010081: arnt2
subclass of: SO_0000673
so part of: arnt2
location: join(3125914..3126047,3162672..3162719,3181244..3181457,3184270..3184483,3252353..3252455,3275182..3275247,3276023..3276108,3322531..3322607,3336402..3336536,3337136..3337210,3362845..3362996,3373964..3374039,3374256..3374379,3401515..3401614,3405766..3405907,3425887..3426055,3468306..3468451,3470338..3470436)
location: region:3125914-3470436:1
so has part: feature:3125914-3126047:1:exon
so has part: feature:3162672-3162719:1:exon
so has part: feature:3181244-3181457:1:exon
so has part: feature:3184270-3184483:1:exon
so has part: feature:3252353-3252455:1:exon
so has part: feature:3275182-3275247:1:exon
so has part: feature:3276023-3276108:1:exon
so has part: feature:3322531-3322607:1:exon
so has part: feature:3336402-3336536:1:exon
so has part: feature:3337136-3337210:1:exon
so has part: feature:3362845-3362996:1:exon
so has part: feature:3373964-3374039:1:exon
so has part: feature:3374256-3374379:1:exon
so has part: feature:3401515-3401614:1:exon
so has part: feature:3405766-3405907:1:exon
so has part: feature:3425887-3426055:1:exon
so has part: feature:3468306-3468451:1:exon
so has part: feature:3470338-3470436:1:exon

XP_048472019.1
type: Protein
SIO_000068: ncbiprotein

position:3125914:1
position: 3125914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3470436:1
position: 3470436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3125914-3126047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3162672-3162719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3181244-3181457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3184270-3184483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3252353-3252455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3275182-3275247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3276023-3276108:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3322531-3322607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3336402-3336536:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3337136-3337210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3362845-3362996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3373964-3374039:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3374256-3374379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3401515-3401614:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3405766-3405907:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3425887-3426055:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3468306-3468451:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3470338-3470436:1:exon

LOC125486809
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3255558..3260282)
location: region:3255558-3260282:-1
so has part: feature:3255558-3260282:-1:exon
subclass of: SO_0000011

125486809
type: Gene
SIO_000068: ncbigene

position:3255558:-1
position: 3255558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260282:-1
position: 3260282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3255558-3260282:-1:exon

LOC125486809
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125486809
product: uncharacterized LOC125486809
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007265438.1
SIO_010081: LOC125486809
subclass of: SO_0000673
so part of: LOC125486809
location: complement(join(3255558..3255675,3255853..3255998,3260043..3260282))
location: region:3255558-3260282:-1
so has part: feature:3260043-3260282:-1:exon
so has part: feature:3255853-3255998:-1:exon
so has part: feature:3255558-3255675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3260043-3260282:-1:exon

position:3260043:-1
position: 3260043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3255853-3255998:-1:exon

position:3255853:-1
position: 3255853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255998:-1
position: 3255998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3255558-3255675:-1:exon

position:3255675:-1
position: 3255675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125486817
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3587996..3597665
location: region:3587996-3597665:1
so has part: feature:3587996-3597665:1:exon
subclass of: SO_0000011

125486817
type: Gene
SIO_000068: ncbigene

position:3587996:1
position: 3587996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3597665:1
position: 3597665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3587996-3597665:1:exon

LOC125486817
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125486817
product: uncharacterized LOC125486817
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007265443.1
SIO_010081: LOC125486817
subclass of: SO_0000673
so part of: LOC125486817
location: join(3587996..3588046,3589291..3589412,3597532..3597665)
location: region:3587996-3597665:1
so has part: feature:3587996-3588046:1:exon
so has part: feature:3589291-3589412:1:exon
so has part: feature:3597532-3597665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3587996-3588046:1:exon

position:3588046:1
position: 3588046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3589291-3589412:1:exon

position:3589291:1
position: 3589291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3589412:1
position: 3589412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3597532-3597665:1:exon

position:3597532:1
position: 3597532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109915558
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109915558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3677381..3678338)
location: region:3677381-3678338:-1
so has part: feature:3677381-3678338:-1:exon
subclass of: SO_0000010

109915558
type: Gene
SIO_000068: ncbigene

position:3677381:-1
position: 3677381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3678338:-1
position: 3678338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3677381-3678338:-1:exon

LOC109915558
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109915558
product: alpha/beta hydrolase domain-containing protein 17C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048616063.1
SIO_010081: LOC109915558
subclass of: SO_0000673
so part of: LOC109915558
location: complement(3677381..3678338)
location: region:3677381-3678338:-1
so has part: feature:3677381-3678338:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3677381-3678338:-1:exon

LOC109915558
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109915558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha/beta hydrolase domain-containing protein 17C-like
translation: MPTAAGEQGDEEHSSSSSSSPNPTPSPSPRMNGFSLGELCWLFCCPPCPSRIAAKLAFLPPEPTYTVLTEESSSLCSLHLSERADWQFSERELELLEVFFVRSGRGNRLACMFARCVPDSRYTLLFSHGNAVDLGQMCSFYIGLGNRIKCNIFSYDYSGYGASNGKPSERNLYSDIEAAWTALRTRSVEQGQYWRVQPPPTAVCHSRDCVSEFLSYAQWV
SIO_010081: LOC109915558
subclass of: SO_0000673
so part of: LOC109915558
location: complement(3677424..3678086)
location: region:3677424-3678086:-1
so has part: feature:3677424-3678086:-1:exon

XP_048472020.1
type: Protein
SIO_000068: ncbiprotein

position:3677424:-1
position: 3677424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3678086:-1
position: 3678086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3677424-3678086:-1:exon

LOC109936373
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3773574..3805151
location: region:3773574-3805151:1
so has part: feature:3773574-3805151:1:exon

109936373
type: Gene
SIO_000068: ncbigene

position:3773574:1
position: 3773574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3805151:1
position: 3805151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3773574-3805151:1:exon

LOC109936373
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109936373
product: uncharacterized LOC109936373
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007265420.1
SIO_010081: LOC109936373
so part of: LOC109936373
location: join(3773574..3773755,3803482..3805151)
location: region:3773574-3805151:1
so has part: feature:3773574-3773755:1:exon
so has part: feature:3803482-3805151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3773574-3773755:1:exon

position:3773755:1
position: 3773755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3803482-3805151:1:exon

position:3803482:1
position: 3803482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109936338
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3870263..3955217
location: region:3870263-3955217:1
so has part: feature:3870263-3955217:1:exon
subclass of: SO_0000010

109936338
type: Gene
SIO_000068: ncbigene

position:3870263:1
position: 3870263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3955217:1
position: 3955217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3870263-3955217:1:exon

LOC109936338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936338
product: cell surface hyaluronidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048615714.1
SIO_010081: LOC109936338
subclass of: SO_0000673
so part of: LOC109936338
location: join(3870263..3870269,3870404..3870577,3871088..3871228,3871543..3872101,3873851..3874020,3877962..3878150,3884449..3884618,3887032..3887241,3889488..3889693,3891200..3891269,3894686..3894814,3897343..3897428,3900717..3900848,3901022..3901057,3905902..3906054,3906176..3906353,3908446..3908661,3912269..3912477,3934042..3934224,3936059..3936281,3939962..3940063,3954562..3954722,3954988..3955217)
location: region:3870263-3955217:1
so has part: feature:3870263-3870269:1:exon
so has part: feature:3870404-3870577:1:exon
so has part: feature:3871088-3871228:1:exon
so has part: feature:3871543-3872101:1:exon
so has part: feature:3873851-3874020:1:exon
so has part: feature:3877962-3878150:1:exon
so has part: feature:3884449-3884618:1:exon
so has part: feature:3887032-3887241:1:exon
so has part: feature:3889488-3889693:1:exon
so has part: feature:3891200-3891269:1:exon
so has part: feature:3894686-3894814:1:exon
so has part: feature:3897343-3897428:1:exon
so has part: feature:3900717-3900848:1:exon
so has part: feature:3901022-3901057:1:exon
so has part: feature:3905902-3906054:1:exon
so has part: feature:3906176-3906353:1:exon
so has part: feature:3908446-3908661:1:exon
so has part: feature:3912269-3912477:1:exon
so has part: feature:3934042-3934224:1:exon
so has part: feature:3936059-3936281:1:exon
so has part: feature:3939962-3940063:1:exon
so has part: feature:3954562-3954722:1:exon
so has part: feature:3954988-3955217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3870263-3870269:1:exon

position:3870269:1
position: 3870269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3870404-3870577:1:exon

position:3870404:1
position: 3870404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3870577:1
position: 3870577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3871088-3871228:1:exon

position:3871088:1
position: 3871088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3871228:1
position: 3871228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3871543-3872101:1:exon

position:3871543:1
position: 3871543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3872101:1
position: 3872101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3873851-3874020:1:exon

position:3873851:1
position: 3873851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3874020:1
position: 3874020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3877962-3878150:1:exon

position:3877962:1
position: 3877962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3878150:1
position: 3878150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3884449-3884618:1:exon

position:3884449:1
position: 3884449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3884618:1
position: 3884618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3887032-3887241:1:exon

position:3887032:1
position: 3887032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3887241:1
position: 3887241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3889488-3889693:1:exon

position:3889488:1
position: 3889488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889693:1
position: 3889693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3891200-3891269:1:exon

position:3891200:1
position: 3891200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3891269:1
position: 3891269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3894686-3894814:1:exon

position:3894686:1
position: 3894686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3894814:1
position: 3894814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3897343-3897428:1:exon

position:3897343:1
position: 3897343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3897428:1
position: 3897428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3900717-3900848:1:exon

position:3900717:1
position: 3900717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3900848:1
position: 3900848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3901022-3901057:1:exon

position:3901022:1
position: 3901022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3901057:1
position: 3901057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3905902-3906054:1:exon

position:3905902:1
position: 3905902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3906054:1
position: 3906054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3906176-3906353:1:exon

position:3906176:1
position: 3906176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3906353:1
position: 3906353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3908446-3908661:1:exon

position:3908446:1
position: 3908446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3908661:1
position: 3908661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3912269-3912477:1:exon

position:3912269:1
position: 3912269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3912477:1
position: 3912477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3934042-3934224:1:exon

position:3934042:1
position: 3934042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3934224:1
position: 3934224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3936059-3936281:1:exon

position:3936059:1
position: 3936059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3936281:1
position: 3936281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3939962-3940063:1:exon

position:3939962:1
position: 3939962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3940063:1
position: 3940063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3954562-3954722:1:exon

position:3954562:1
position: 3954562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3954722:1
position: 3954722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3954988-3955217:1:exon

position:3954988:1
position: 3954988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109936338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell surface hyaluronidase-like
translation: MRGASLRDRDTAPTRGTGRQHQREREKQLHKTGASPAVHIPGGSESPCSGRGATGIGRPSVRCPDKDPSLVPWNPGHDERHKVQIGRGTFLKLESSATVHSIIIEDGGKLVFSDTPRVPITLRARYIVIRNGGELHIGADKCPYTSRATISLVGRSTEGPQVEQFGKKFIGVDRGGVLELHGRRSLSWTLLSRTLYPGGLQYGAYRYDRRRGSRGFNVRVIDPGTARLLRADRFDTHLWANESRRLQEFLRSQPRGRIVAVAVGDSAARSLSVSARNDLQELLGSEQARHLGYRQPWAIVGVIRASESFVVEDRRLYQPNGSTGMAIARRDFQTYDGTPFTVTAFSEWVHGVPHCGFRVEVSKGVVLNLMDDTSSWLPGDQIVIASTDYSMYQAENFNLLPCPECKVNQVKIDGKPRYLHMGEVIDGIDMRAEVGLLSRNILIKGEMEDSCYGQNFCHFFSHDTFGGQIRILRNFASVHLSGVELTNMGQQILGSYPVHFHLAGDVDQKGGYNPPTYVDNVAIHHCFSRCVAIHGTNGLLVKDTIGYDTLGHCFFLEDGVEQRNILYHNLGLLTKPGTILPSDRNAIMCVTIRDQVYGNYIPVPSTDCMAVTTFWISNPNNHLINNAAAGAQDVGIWFIFHRAPTGQSVGQYPEGQSEFTPLGVFYNNRVHSNFKAGLFIGSGVKTTESNAEDPREVLTVDFARFRPHQNADPRKPRVPAIIAGLVSFKNNDHGAWARGGDIIFRNSGFSDNGIGLTLASDGTFPTDEGSSLEVTKSIFVGESINVGCNGGQNRYWGKGAHGEYRTLPRNRTFPIRGFQIYDGPVRITQCTFKNYMSVHERYSSALAFFMRNSWQISPQNNVSQVKLEWNVNLEVFFGKPGQWFGTNSLDGDQTSIFHDLDGSMTGYPDTFVARADNYLVRHSGCLSVPRWNGVICSGKYAQLYVQAWRPENLSLLITKDSYPDHPLTLQGVNRGASYQQYQPVIMLEQAYTLRWNGRTPEQIVLYPINFNRGNWIQVGLCYPKRTVFKIMSDIYDRSSGRVHSVKRYKAASSFNIMQKNPDKSLYYFDSSAGILFLILQAKHVRKGHSYCSKHGCERVKILSHVISWESSDCLRKGHPVKHSGEPVHLITLTGRVAAPCRHCGAPQVAITSDPHTVYIKIEIQSQSPGDVQNGRKFSFIKVNDEVFLAEKAGLLFVMVDACSGDILSRQYFDTAHTLQVADSIANYIQETIRERVQDILLGLGILN
SIO_010081: LOC109936338
subclass of: SO_0000673
so part of: LOC109936338
location: join(3870263..3870269,3870404..3870577,3871088..3871228,3871543..3872101,3873851..3874020,3877962..3878150,3884449..3884618,3887032..3887241,3889488..3889693,3891200..3891269,3894686..3894814,3897343..3897428,3900717..3900848,3901022..3901057,3905902..3906054,3906176..3906353,3908446..3908661,3912269..3912477,3934042..3934224,3936059..3936281,3939962..3940063,3954562..3954722,3954988..3955027)
location: region:3870263-3955027:1
so has part: feature:3870263-3870269:1:exon
so has part: feature:3870404-3870577:1:exon
so has part: feature:3871088-3871228:1:exon
so has part: feature:3871543-3872101:1:exon
so has part: feature:3873851-3874020:1:exon
so has part: feature:3877962-3878150:1:exon
so has part: feature:3884449-3884618:1:exon
so has part: feature:3887032-3887241:1:exon
so has part: feature:3889488-3889693:1:exon
so has part: feature:3891200-3891269:1:exon
so has part: feature:3894686-3894814:1:exon
so has part: feature:3897343-3897428:1:exon
so has part: feature:3900717-3900848:1:exon
so has part: feature:3901022-3901057:1:exon
so has part: feature:3905902-3906054:1:exon
so has part: feature:3906176-3906353:1:exon
so has part: feature:3908446-3908661:1:exon
so has part: feature:3912269-3912477:1:exon
so has part: feature:3934042-3934224:1:exon
so has part: feature:3936059-3936281:1:exon
so has part: feature:3939962-3940063:1:exon
so has part: feature:3954562-3954722:1:exon
so has part: feature:3954988-3955027:1:exon

XP_048471671.1
type: Protein
SIO_000068: ncbiprotein

position:3955027:1
position: 3955027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3870263-3870269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3870404-3870577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3871088-3871228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3871543-3872101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3873851-3874020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3877962-3878150:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3884449-3884618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3887032-3887241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3889488-3889693:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3891200-3891269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3894686-3894814:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3897343-3897428:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3900717-3900848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3901022-3901057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3905902-3906054:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3906176-3906353:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3908446-3908661:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3912269-3912477:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3934042-3934224:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3936059-3936281:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3939962-3940063:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3954562-3954722:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3954988-3955027:1:exon

LOC109936348
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3870358..4086291
location: region:3870358-4086291:1
so has part: feature:3870358-4086291:1:exon
subclass of: SO_0000010

109936348
type: Gene
SIO_000068: ncbigene

position:3870358:1
position: 3870358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4086291:1
position: 4086291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3870358-4086291:1:exon

LOC109936348
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936348
product: cell migration inducing hyaluronidase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615950.1
SIO_010081: LOC109936348
subclass of: SO_0000673
so part of: LOC109936348
location: join(3870358..3870577,3973852..3974010,3982593..3982730,3988288..3988429,3989235..3989471,3990262..3990441,3995925..3995995,3997699..3997794,4001449..4001570,4003113..4003260,4007316..4007507,4019262..4019431,4019753..4019962,4030926..4031131,4049819..4049888,4050024..4050152,4051239..4051324,4051515..4051646,4056124..4056159,4064978..4065133,4066493..4066673,4069098..4069313,4076272..4076483,4077282..4077467,4077834..4078038,4078979..4079065,4080182..4080339,4081693..4081790,4085521..4086291)
location: region:3870358-4086291:1
so has part: feature:3870358-3870577:1:exon
so has part: feature:3973852-3974010:1:exon
so has part: feature:3982593-3982730:1:exon
so has part: feature:3988288-3988429:1:exon
so has part: feature:3989235-3989471:1:exon
so has part: feature:3990262-3990441:1:exon
so has part: feature:3995925-3995995:1:exon
so has part: feature:3997699-3997794:1:exon
so has part: feature:4001449-4001570:1:exon
so has part: feature:4003113-4003260:1:exon
so has part: feature:4007316-4007507:1:exon
so has part: feature:4019262-4019431:1:exon
so has part: feature:4019753-4019962:1:exon
so has part: feature:4030926-4031131:1:exon
so has part: feature:4049819-4049888:1:exon
so has part: feature:4050024-4050152:1:exon
so has part: feature:4051239-4051324:1:exon
so has part: feature:4051515-4051646:1:exon
so has part: feature:4056124-4056159:1:exon
so has part: feature:4064978-4065133:1:exon
so has part: feature:4066493-4066673:1:exon
so has part: feature:4069098-4069313:1:exon
so has part: feature:4076272-4076483:1:exon
so has part: feature:4077282-4077467:1:exon
so has part: feature:4077834-4078038:1:exon
so has part: feature:4078979-4079065:1:exon
so has part: feature:4080182-4080339:1:exon
so has part: feature:4081693-4081790:1:exon
so has part: feature:4085521-4086291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3870358-3870577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3973852-3974010:1:exon

position:3973852:1
position: 3973852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3974010:1
position: 3974010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3982593-3982730:1:exon

position:3982593:1
position: 3982593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3982730:1
position: 3982730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3988288-3988429:1:exon

position:3988288:1
position: 3988288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3988429:1
position: 3988429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3989235-3989471:1:exon

position:3989235:1
position: 3989235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3989471:1
position: 3989471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3990262-3990441:1:exon

position:3990262:1
position: 3990262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3990441:1
position: 3990441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3995925-3995995:1:exon

position:3995925:1
position: 3995925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3995995:1
position: 3995995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3997699-3997794:1:exon

position:3997699:1
position: 3997699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3997794:1
position: 3997794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4001449-4001570:1:exon

position:4001449:1
position: 4001449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4001570:1
position: 4001570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4003113-4003260:1:exon

position:4003113:1
position: 4003113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4003260:1
position: 4003260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4007316-4007507:1:exon

position:4007316:1
position: 4007316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4007507:1
position: 4007507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4019262-4019431:1:exon

position:4019262:1
position: 4019262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4019431:1
position: 4019431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4019753-4019962:1:exon

position:4019753:1
position: 4019753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4019962:1
position: 4019962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4030926-4031131:1:exon

position:4030926:1
position: 4030926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4031131:1
position: 4031131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4049819-4049888:1:exon

position:4049819:1
position: 4049819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4049888:1
position: 4049888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4050024-4050152:1:exon

position:4050024:1
position: 4050024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4050152:1
position: 4050152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4051239-4051324:1:exon

position:4051239:1
position: 4051239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4051324:1
position: 4051324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4051515-4051646:1:exon

position:4051515:1
position: 4051515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4051646:1
position: 4051646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4056124-4056159:1:exon

position:4056124:1
position: 4056124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4056159:1
position: 4056159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4064978-4065133:1:exon

position:4064978:1
position: 4064978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4065133:1
position: 4065133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4066493-4066673:1:exon

position:4066493:1
position: 4066493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4066673:1
position: 4066673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4069098-4069313:1:exon

position:4069098:1
position: 4069098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4069313:1
position: 4069313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4076272-4076483:1:exon

position:4076272:1
position: 4076272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4076483:1
position: 4076483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4077282-4077467:1:exon

position:4077282:1
position: 4077282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4077467:1
position: 4077467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4077834-4078038:1:exon

position:4077834:1
position: 4077834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4078038:1
position: 4078038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4078979-4079065:1:exon

position:4078979:1
position: 4078979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4079065:1
position: 4079065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4080182-4080339:1:exon

position:4080182:1
position: 4080182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4080339:1
position: 4080339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4081693-4081790:1:exon

position:4081693:1
position: 4081693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4081790:1
position: 4081790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4085521-4086291:1:exon

position:4085521:1
position: 4085521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109936348
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936348
product: cell migration inducing hyaluronidase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020534964.2
SIO_010081: LOC109936348
subclass of: SO_0000673
so part of: LOC109936348
location: join(3870506..3870604,3973852..3974010,3982593..3982730,3988288..3988429,3989235..3989471,3990262..3990441,3995925..3995995,3997699..3997794,4001449..4001570,4003113..4003260,4007316..4007507,4019262..4019431,4019753..4019962,4030926..4031131,4049819..4049888,4050024..4050152,4051239..4051324,4051515..4051646,4056124..4056159,4064978..4065133,4066493..4066673,4069098..4069313,4076272..4076483,4077282..4077467,4077834..4078038,4078979..4079065,4080182..4080339,4081693..4081790,4085521..4086291)
location: region:3870506-4086291:1
so has part: feature:3870506-3870604:1:exon
so has part: feature:3973852-3974010:1:exon
so has part: feature:3982593-3982730:1:exon
so has part: feature:3988288-3988429:1:exon
so has part: feature:3989235-3989471:1:exon
so has part: feature:3990262-3990441:1:exon
so has part: feature:3995925-3995995:1:exon
so has part: feature:3997699-3997794:1:exon
so has part: feature:4001449-4001570:1:exon
so has part: feature:4003113-4003260:1:exon
so has part: feature:4007316-4007507:1:exon
so has part: feature:4019262-4019431:1:exon
so has part: feature:4019753-4019962:1:exon
so has part: feature:4030926-4031131:1:exon
so has part: feature:4049819-4049888:1:exon
so has part: feature:4050024-4050152:1:exon
so has part: feature:4051239-4051324:1:exon
so has part: feature:4051515-4051646:1:exon
so has part: feature:4056124-4056159:1:exon
so has part: feature:4064978-4065133:1:exon
so has part: feature:4066493-4066673:1:exon
so has part: feature:4069098-4069313:1:exon
so has part: feature:4076272-4076483:1:exon
so has part: feature:4077282-4077467:1:exon
so has part: feature:4077834-4078038:1:exon
so has part: feature:4078979-4079065:1:exon
so has part: feature:4080182-4080339:1:exon
so has part: feature:4081693-4081790:1:exon
so has part: feature:4085521-4086291:1:exon

position:3870506:1
position: 3870506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3870506-3870604:1:exon

position:3870604:1
position: 3870604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3973852-3974010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3982593-3982730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3988288-3988429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3989235-3989471:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3990262-3990441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3995925-3995995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3997699-3997794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4001449-4001570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4003113-4003260:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4007316-4007507:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4019262-4019431:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4019753-4019962:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4030926-4031131:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4049819-4049888:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4050024-4050152:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4051239-4051324:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4051515-4051646:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4056124-4056159:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4064978-4065133:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4066493-4066673:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4069098-4069313:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4076272-4076483:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4077282-4077467:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4077834-4078038:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4078979-4079065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4080182-4080339:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4081693-4081790:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4085521-4086291:1:exon

LOC109936348
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell migration-inducing and hyaluronan-binding protein
translation: MMMMSHLLYNVGCLLILNLPALFAACPDQDPDLHLWNPGHNKEHRVNIGHNRKLLLSSSATVHSIRIVDGGKLVISDGNEETIILRTRSILIEDGGELHIGSEDCPFQNDVTIILYGRSDEETEELHSYFGLKYIGVSRGGTLELHGAHKLSWTFLNSTLHPGGMSEGGYYFERSWGHRGIIVHVINQIGEVVHSDRFDTYKSKAESKRLAEYLDRVKEGMIISVAVNDEGSTVLDDFAKNVLSKLGSKYFRHLGFRHPWSFITVKGSPESSAEDHVIYQGARGSAAAKVFKLFHSPHGNHFTVGSTSEWVQDVEWTDWFNRDDERGSGDWEKLSDLRVAFPGKICESPIDIQVVTVNGIPASRTGEVFHMHDQDYGFVCRNKDQANGICQNYKVRFLCGKPVRPKVTITIDTHVNSTILQLVDDARTWKPGDVIFVASTDYSMHQTEEFQLLHCPECKPNQVKIQGKAKYLHMGTEVDGVDMRAEVGVLSRNIVIMGEMEDHCYGDNACKFFEFDTVGGHIKMGVGFKAAHIEGVELKHMGQQSMGHYPIHFHMTGDLDEKGGYNPPTYVKGISIHESFSRCVTIHGSNGLLVKDVIGYKTLGHCFFTEDGPEERNTFDHCLGLLVKAGTLLPSDRDSKMCRSITEGVYPGYIPKPRQDCNAVSTFWIANPNNNLINCSAAGSEETGFWFIFHHVPTGPSEGMYSPGYSEHVPLGKFTNNRAHSNYRAGMMIDNGVKTTEANAKDKRPFLSLVGARYSPHKGADPHKPREPAIIKNYIAYKNQDHGAWLRGGDVWLENCQFADNGIGLTLASGGTFPDDDGAKQEVKNSLFVGESENRGTQMADNLVWGPSGLDHSGRALPKGVTFPIRGMQIYDGPINVENCTFRKFAALDGRHTSAIGFRFNNSWQTCPNNNVTSITFQDVPITSRVFFGEPGPWFHHLDLDGDKTTILHDVDGSVSEFAGAYIVKHDNWLLRHSDCIDVPDWRSAICSGHYAQIYIQARRPANLKMKMIKDEYFDKPLYLKGALGKRSHYQQYQPVVMLQKGYTVHWDGPAPQEVTIWLINFNQNDWIRVGFCYPQGSTFNIISDIHNRLSKRTFKTGLFLRTQQMDNLDRGHPTRGYYFFDEDTGLLFLKVKAHKKREAFAFCSSAGCERIKIKASIPKTSKRSDCAMKAYPKYSEIPTVDVPMPQRIPTEQLTTNDHFLEVKLESYQTRFFHIRQDLAYMDVNGRKFYHADDGMQIVVVDGQSGKVVDNRSFRNTILRGIPVHVENYVANIKNNSIALITSKGQIISERPWNKVLTQLGATTVKLKDKLAFVGFKGSFRPEWIKLVVGEEVAKIHEVLPIPVVNKLKL
SIO_010081: LOC109936348
subclass of: SO_0000673
so part of: LOC109936348
location: join(3973938..3974010,3982593..3982730,3988288..3988429,3989235..3989471,3990262..3990441,3995925..3995995,3997699..3997794,4001449..4001570,4003113..4003260,4007316..4007507,4019262..4019431,4019753..4019962,4030926..4031131,4049819..4049888,4050024..4050152,4051239..4051324,4051515..4051646,4056124..4056159,4064978..4065133,4066493..4066673,4069098..4069313,4076272..4076483,4077282..4077467,4077834..4078038,4078979..4079065,4080182..4080339,4081693..4081790,4085521..4085648)
location: region:3973938-4085648:1
so has part: feature:3973938-3974010:1:exon
so has part: feature:3982593-3982730:1:exon
so has part: feature:3988288-3988429:1:exon
so has part: feature:3989235-3989471:1:exon
so has part: feature:3990262-3990441:1:exon
so has part: feature:3995925-3995995:1:exon
so has part: feature:3997699-3997794:1:exon
so has part: feature:4001449-4001570:1:exon
so has part: feature:4003113-4003260:1:exon
so has part: feature:4007316-4007507:1:exon
so has part: feature:4019262-4019431:1:exon
so has part: feature:4019753-4019962:1:exon
so has part: feature:4030926-4031131:1:exon
so has part: feature:4049819-4049888:1:exon
so has part: feature:4050024-4050152:1:exon
so has part: feature:4051239-4051324:1:exon
so has part: feature:4051515-4051646:1:exon
so has part: feature:4056124-4056159:1:exon
so has part: feature:4064978-4065133:1:exon
so has part: feature:4066493-4066673:1:exon
so has part: feature:4069098-4069313:1:exon
so has part: feature:4076272-4076483:1:exon
so has part: feature:4077282-4077467:1:exon
so has part: feature:4077834-4078038:1:exon
so has part: feature:4078979-4079065:1:exon
so has part: feature:4080182-4080339:1:exon
so has part: feature:4081693-4081790:1:exon
so has part: feature:4085521-4085648:1:exon

XP_020390553.1
type: Protein
SIO_000068: ncbiprotein

position:3973938:1
position: 3973938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4085648:1
position: 4085648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3973938-3974010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3982593-3982730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3988288-3988429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3989235-3989471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3990262-3990441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3995925-3995995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3997699-3997794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4001449-4001570:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4003113-4003260:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4007316-4007507:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4019262-4019431:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4019753-4019962:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4030926-4031131:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4049819-4049888:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4050024-4050152:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4051239-4051324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4051515-4051646:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4056124-4056159:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4064978-4065133:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4066493-4066673:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4069098-4069313:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4076272-4076483:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4077282-4077467:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4077834-4078038:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4078979-4079065:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4080182-4080339:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4081693-4081790:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4085521-4085648:1:exon

LOC109936348
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell migration-inducing and hyaluronan-binding protein
translation: MMMMSHLLYNVGCLLILNLPALFAACPDQDPDLHLWNPGHNKEHRVNIGHNRKLLLSSSATVHSIRIVDGGKLVISDGNEETIILRTRSILIEDGGELHIGSEDCPFQNDVTIILYGRSDEETEELHSYFGLKYIGVSRGGTLELHGAHKLSWTFLNSTLHPGGMSEGGYYFERSWGHRGIIVHVINQIGEVVHSDRFDTYKSKAESKRLAEYLDRVKEGMIISVAVNDEGSTVLDDFAKNVLSKLGSKYFRHLGFRHPWSFITVKGSPESSAEDHVIYQGARGSAAAKVFKLFHSPHGNHFTVGSTSEWVQDVEWTDWFNRDDERGSGDWEKLSDLRVAFPGKICESPIDIQVVTVNGIPASRTGEVFHMHDQDYGFVCRNKDQANGICQNYKVRFLCGKPVRPKVTITIDTHVNSTILQLVDDARTWKPGDVIFVASTDYSMHQTEEFQLLHCPECKPNQVKIQGKAKYLHMGTEVDGVDMRAEVGVLSRNIVIMGEMEDHCYGDNACKFFEFDTVGGHIKMGVGFKAAHIEGVELKHMGQQSMGHYPIHFHMTGDLDEKGGYNPPTYVKGISIHESFSRCVTIHGSNGLLVKDVIGYKTLGHCFFTEDGPEERNTFDHCLGLLVKAGTLLPSDRDSKMCRSITEGVYPGYIPKPRQDCNAVSTFWIANPNNNLINCSAAGSEETGFWFIFHHVPTGPSEGMYSPGYSEHVPLGKFTNNRAHSNYRAGMMIDNGVKTTEANAKDKRPFLSLVGARYSPHKGADPHKPREPAIIKNYIAYKNQDHGAWLRGGDVWLENCQFADNGIGLTLASGGTFPDDDGAKQEVKNSLFVGESENRGTQMADNLVWGPSGLDHSGRALPKGVTFPIRGMQIYDGPINVENCTFRKFAALDGRHTSAIGFRFNNSWQTCPNNNVTSITFQDVPITSRVFFGEPGPWFHHLDLDGDKTTILHDVDGSVSEFAGAYIVKHDNWLLRHSDCIDVPDWRSAICSGHYAQIYIQARRPANLKMKMIKDEYFDKPLYLKGALGKRSHYQQYQPVVMLQKGYTVHWDGPAPQEVTIWLINFNQNDWIRVGFCYPQGSTFNIISDIHNRLSKRTFKTGLFLRTQQMDNLDRGHPTRGYYFFDEDTGLLFLKVKAHKKREAFAFCSSAGCERIKIKASIPKTSKRSDCAMKAYPKYSEIPTVDVPMPQRIPTEQLTTNDHFLEVKLESYQTRFFHIRQDLAYMDVNGRKFYHADDGMQIVVVDGQSGKVVDNRSFRNTILRGIPVHVENYVANIKNNSIALITSKGQIISERPWNKVLTQLGATTVKLKDKLAFVGFKGSFRPEWIKLVVGEEVAKIHEVLPIPVVNKLKL
SIO_010081: LOC109936348
subclass of: SO_0000673
so part of: LOC109936348
location: join(3973938..3974010,3982593..3982730,3988288..3988429,3989235..3989471,3990262..3990441,3995925..3995995,3997699..3997794,4001449..4001570,4003113..4003260,4007316..4007507,4019262..4019431,4019753..4019962,4030926..4031131,4049819..4049888,4050024..4050152,4051239..4051324,4051515..4051646,4056124..4056159,4064978..4065133,4066493..4066673,4069098..4069313,4076272..4076483,4077282..4077467,4077834..4078038,4078979..4079065,4080182..4080339,4081693..4081790,4085521..4085648)
location: region:3973938-4085648:1
so has part: feature:3973938-3974010:1:exon
so has part: feature:3982593-3982730:1:exon
so has part: feature:3988288-3988429:1:exon
so has part: feature:3989235-3989471:1:exon
so has part: feature:3990262-3990441:1:exon
so has part: feature:3995925-3995995:1:exon
so has part: feature:3997699-3997794:1:exon
so has part: feature:4001449-4001570:1:exon
so has part: feature:4003113-4003260:1:exon
so has part: feature:4007316-4007507:1:exon
so has part: feature:4019262-4019431:1:exon
so has part: feature:4019753-4019962:1:exon
so has part: feature:4030926-4031131:1:exon
so has part: feature:4049819-4049888:1:exon
so has part: feature:4050024-4050152:1:exon
so has part: feature:4051239-4051324:1:exon
so has part: feature:4051515-4051646:1:exon
so has part: feature:4056124-4056159:1:exon
so has part: feature:4064978-4065133:1:exon
so has part: feature:4066493-4066673:1:exon
so has part: feature:4069098-4069313:1:exon
so has part: feature:4076272-4076483:1:exon
so has part: feature:4077282-4077467:1:exon
so has part: feature:4077834-4078038:1:exon
so has part: feature:4078979-4079065:1:exon
so has part: feature:4080182-4080339:1:exon
so has part: feature:4081693-4081790:1:exon
so has part: feature:4085521-4085648:1:exon

XP_048471907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3973938-3974010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3982593-3982730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3988288-3988429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3989235-3989471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3990262-3990441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3995925-3995995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3997699-3997794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4001449-4001570:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4003113-4003260:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4007316-4007507:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4019262-4019431:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4019753-4019962:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4030926-4031131:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4049819-4049888:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4050024-4050152:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4051239-4051324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4051515-4051646:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4056124-4056159:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4064978-4065133:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4066493-4066673:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4069098-4069313:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4076272-4076483:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4077282-4077467:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4077834-4078038:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4078979-4079065:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4080182-4080339:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4081693-4081790:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4085521-4085648:1:exon

mesd
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mesd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4121444..4146438)
location: region:4121444-4146438:-1
so has part: feature:4121444-4146438:-1:exon
subclass of: SO_0000010

109936359
type: Gene
SIO_000068: ncbigene

position:4121444:-1
position: 4121444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4146438:-1
position: 4146438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4121444-4146438:-1:exon

mesd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mesd
product: mesoderm development LRP chaperone
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615715.1
SIO_010081: mesd
subclass of: SO_0000673
so part of: mesd
location: complement(join(4121444..4122606,4138971..4139231,4146356..4146438))
location: region:4121444-4146438:-1
so has part: feature:4146356-4146438:-1:exon
so has part: feature:4138971-4139231:-1:exon
so has part: feature:4121444-4122606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4146356-4146438:-1:exon

position:4146356:-1
position: 4146356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4138971-4139231:-1:exon

position:4138971:-1
position: 4138971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4139231:-1
position: 4139231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4121444-4122606:-1:exon

position:4122606:-1
position: 4122606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mesd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mesd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LRP chaperone MESD
translation: MVRSGERCCKKRLGVQVHSSLKVESRDRNLYDLVFMQKDDDIEEGDLPEHKRTSPPIDFSKIDPSNPENLLKATKKGKTLMIFVTVSGNPTEKDTEEITSLWQGSLYNANYDVQRFVVGSDRAIFMLRDGSYAWEIKDFLINQERCVDVTVEGQTYPGKAAEKKKNEIKPDKKKDATVSQKGNRANKNEL
SIO_010081: mesd
subclass of: SO_0000673
so part of: mesd
location: complement(join(4122378..4122606,4138971..4139231,4146356..4146438))
location: region:4122378-4146438:-1
so has part: feature:4146356-4146438:-1:exon
so has part: feature:4138971-4139231:-1:exon
so has part: feature:4122378-4122606:-1:exon

XP_048471672.1
type: Protein
SIO_000068: ncbiprotein

position:4122378:-1
position: 4122378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4146356-4146438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138971-4139231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4122378-4122606:-1:exon

tlnrd1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: tlnrd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4259703..4263034)
location: region:4259703-4263034:-1
so has part: feature:4259703-4263034:-1:exon
subclass of: SO_0000010

109922300
type: Gene
SIO_000068: ncbigene

position:4259703:-1
position: 4259703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4263034:-1
position: 4263034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4259703-4263034:-1:exon

tlnrd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tlnrd1
product: talin rod domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020522328.2
SIO_010081: tlnrd1
subclass of: SO_0000673
so part of: tlnrd1
location: complement(4259703..4263034)
location: region:4259703-4263034:-1
so has part: feature:4259703-4263034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4259703-4263034:-1:exon

tlnrd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tlnrd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin rod domain-containing protein 1
translation: MASSGSAKSGASGSVSGSGSQQRRRLVFVCDMCKSKMQLVADLLLLSGDNRPVHSESLAPGPGQSFDKIRDAVIARTKGLSILTHDLQSQLNLGRYGEVAERLAELSELVVALVECSAHAAYLAAAEAPGSQAAVAGLVDRYRLRRARHEVEQSCGLLRTAPVSELTPPLLLEVSRGLARGLRGLTEACAPAGRGSGDRFARDQLRLGVKCMSASAAALLACVRELKARPGEASRARCVLFGGPLLQAVHALVGFASEPQFVGQAAALSAEGRAVQTAVLGGAMSVVSASVLLTQCLRDIALHSDSSKVPDYRQRLHHSALAVSDGCNLLSQALRERSSPRTLPPPPPPPPPLNCHSVN
SIO_010081: tlnrd1
subclass of: SO_0000673
so part of: tlnrd1
location: complement(4260741..4261820)
location: region:4260741-4261820:-1
so has part: feature:4260741-4261820:-1:exon

XP_020377917.1
type: Protein
SIO_000068: ncbiprotein

position:4260741:-1
position: 4260741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4261820:-1
position: 4261820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4260741-4261820:-1:exon

cfap161
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cfap161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4379622..4439761
location: region:4379622-4439761:1
so has part: feature:4379622-4439761:1:exon
subclass of: SO_0000010

109921499
type: Gene
SIO_000068: ncbigene

position:4379622:1
position: 4379622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4439761:1
position: 4439761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4379622-4439761:1:exon

cfap161
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cfap161
product: cilia and flagella associated protein 161, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048615958.1
SIO_010081: cfap161
subclass of: SO_0000673
so part of: cfap161
location: join(4379622..4379766,4398378..4398467,4410091..4410329,4411755..4411836,4412014..4412172,4430510..4430583,4438450..4439761)
location: region:4379622-4439761:1
so has part: feature:4379622-4379766:1:exon
so has part: feature:4398378-4398467:1:exon
so has part: feature:4410091-4410329:1:exon
so has part: feature:4411755-4411836:1:exon
so has part: feature:4412014-4412172:1:exon
so has part: feature:4430510-4430583:1:exon
so has part: feature:4438450-4439761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4379622-4379766:1:exon

position:4379766:1
position: 4379766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4398378-4398467:1:exon

position:4398378:1
position: 4398378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4398467:1
position: 4398467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4410091-4410329:1:exon

position:4410091:1
position: 4410091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4410329:1
position: 4410329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4411755-4411836:1:exon

position:4411755:1
position: 4411755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4411836:1
position: 4411836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4412014-4412172:1:exon

position:4412014:1
position: 4412014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4412172:1
position: 4412172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4430510-4430583:1:exon

position:4430510:1
position: 4430510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4430583:1
position: 4430583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4438450-4439761:1:exon

position:4438450:1
position: 4438450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cfap161
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cfap161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 161 isoform X1
translation: MGERTYNSSVLLHNWFEDLALDEDVIKDFIAKKERGELLIQKMGSYREALLEKTELAKSSDGHVHFGDAVLLINPGTETKHATNIHPLRRPMALNMNVDQSRFLTSTKVDSPCEVSASLDLSPTIRNTFVVTSIDGSCVGEPLRYGQSFALRTLEGVSGQLYLTSDTKLFVKFAKRSRMQLVNLLDELSFLSCWQVLYLDPQLRLEYDGYPVQANVKVLINHVRTNQALAALQKFSFWTAFGREYEITTNTFYDSHRAEEDLNHWVIVTGDPGVPHGTLFHALPPFCEDEMPTKNRRQPSPSCSTQPPTC
SIO_010081: cfap161
subclass of: SO_0000673
so part of: cfap161
location: join(4379698..4379766,4398378..4398467,4410091..4410329,4411755..4411836,4412014..4412172,4430510..4430583,4438450..4438669)
location: region:4379698-4438669:1
so has part: feature:4379698-4379766:1:exon
so has part: feature:4398378-4398467:1:exon
so has part: feature:4410091-4410329:1:exon
so has part: feature:4411755-4411836:1:exon
so has part: feature:4412014-4412172:1:exon
so has part: feature:4430510-4430583:1:exon
so has part: feature:4438450-4438669:1:exon

XP_048471915.1
type: Protein
SIO_000068: ncbiprotein

position:4379698:1
position: 4379698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4438669:1
position: 4438669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4379698-4379766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4398378-4398467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4410091-4410329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4411755-4411836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4412014-4412172:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4430510-4430583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4438450-4438669:1:exon

cfap161
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cfap161
product: cilia and flagella associated protein 161, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048615959.1
SIO_010081: cfap161
subclass of: SO_0000673
so part of: cfap161
location: join(4394246..4394809,4398378..4398467,4410091..4410329,4411755..4411836,4412014..4412172,4430510..4430583,4438450..4439706)
location: region:4394246-4439706:1
so has part: feature:4394246-4394809:1:exon
so has part: feature:4398378-4398467:1:exon
so has part: feature:4410091-4410329:1:exon
so has part: feature:4411755-4411836:1:exon
so has part: feature:4412014-4412172:1:exon
so has part: feature:4430510-4430583:1:exon
so has part: feature:4438450-4439706:1:exon

position:4394246:1
position: 4394246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4439706:1
position: 4439706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4394246-4394809:1:exon

position:4394809:1
position: 4394809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4398378-4398467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4410091-4410329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4411755-4411836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4412014-4412172:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4430510-4430583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4438450-4439706:1:exon

cfap161
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cfap161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 161 isoform X2
translation: MGSYREALLEKTELAKSSDGHVHFGDAVLLINPGTETKHATNIHPLRRPMALNMNVDQSRFLTSTKVDSPCEVSASLDLSPTIRNTFVVTSIDGSCVGEPLRYGQSFALRTLEGVSGQLYLTSDTKLFVKFAKRSRMQLVNLLDELSFLSCWQVLYLDPQLRLEYDGYPVQANVKVLINHVRTNQALAALQKFSFWTAFGREYEITTNTFYDSHRAEEDLNHWVIVTGDPGVPHGTLFHALPPFCEDEMPTKNRRQPSPSCSTQPPTC
SIO_010081: cfap161
subclass of: SO_0000673
so part of: cfap161
location: join(4398435..4398467,4410091..4410329,4411755..4411836,4412014..4412172,4430510..4430583,4438450..4438669)
location: region:4398435-4438669:1
so has part: feature:4398435-4398467:1:exon
so has part: feature:4410091-4410329:1:exon
so has part: feature:4411755-4411836:1:exon
so has part: feature:4412014-4412172:1:exon
so has part: feature:4430510-4430583:1:exon
so has part: feature:4438450-4438669:1:exon

XP_048471916.1
type: Protein
SIO_000068: ncbiprotein

position:4398435:1
position: 4398435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4398435-4398467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4410091-4410329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4411755-4411836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4412014-4412172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4430510-4430583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4438450-4438669:1:exon

il16
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: il16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4533120..4601820
location: region:4533120-4601820:1
so has part: feature:4533120-4601820:1:exon
subclass of: SO_0000010

109921433
type: Gene
SIO_000068: ncbigene

position:4533120:1
position: 4533120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4601820:1
position: 4601820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4533120-4601820:1:exon

il16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: il16
product: interleukin 16
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616025.1
SIO_010081: il16
subclass of: SO_0000673
so part of: il16
location: join(4533120..4533164,4537877..4537987,4540054..4540168,4549886..4549959,4550058..4550286,4556925..4557042,4558838..4558970,4569146..4569233,4571599..4572083,4581936..4582071,4582741..4584250,4590058..4590244,4592267..4592368,4595656..4595896,4597459..4597590,4599325..4601820)
location: region:4533120-4601820:1
so has part: feature:4533120-4533164:1:exon
so has part: feature:4537877-4537987:1:exon
so has part: feature:4540054-4540168:1:exon
so has part: feature:4549886-4549959:1:exon
so has part: feature:4550058-4550286:1:exon
so has part: feature:4556925-4557042:1:exon
so has part: feature:4558838-4558970:1:exon
so has part: feature:4569146-4569233:1:exon
so has part: feature:4571599-4572083:1:exon
so has part: feature:4581936-4582071:1:exon
so has part: feature:4582741-4584250:1:exon
so has part: feature:4590058-4590244:1:exon
so has part: feature:4592267-4592368:1:exon
so has part: feature:4595656-4595896:1:exon
so has part: feature:4597459-4597590:1:exon
so has part: feature:4599325-4601820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4533120-4533164:1:exon

position:4533164:1
position: 4533164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4537877-4537987:1:exon

position:4537877:1
position: 4537877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4537987:1
position: 4537987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4540054-4540168:1:exon

position:4540054:1
position: 4540054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4540168:1
position: 4540168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4549886-4549959:1:exon

position:4549886:1
position: 4549886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4549959:1
position: 4549959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4550058-4550286:1:exon

position:4550058:1
position: 4550058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4550286:1
position: 4550286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4556925-4557042:1:exon

position:4556925:1
position: 4556925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4557042:1
position: 4557042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4558838-4558970:1:exon

position:4558838:1
position: 4558838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4558970:1
position: 4558970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4569146-4569233:1:exon

position:4569146:1
position: 4569146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4569233:1
position: 4569233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4571599-4572083:1:exon

position:4571599:1
position: 4571599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4572083:1
position: 4572083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4581936-4582071:1:exon

position:4581936:1
position: 4581936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4582071:1
position: 4582071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4582741-4584250:1:exon

position:4582741:1
position: 4582741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4584250:1
position: 4584250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4590058-4590244:1:exon

position:4590058:1
position: 4590058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4590244:1
position: 4590244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4592267-4592368:1:exon

position:4592267:1
position: 4592267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4592368:1
position: 4592368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4595656-4595896:1:exon

position:4595656:1
position: 4595656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4595896:1
position: 4595896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4597459-4597590:1:exon

position:4597459:1
position: 4597459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4597590:1
position: 4597590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4599325-4601820:1:exon

position:4599325:1
position: 4599325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

il16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: il16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-interleukin-16
translation: MTRAVRSLSSAHLINSCSSASPSVISNIVLMKGQGKGLGFSVVGGRDSVYGPMGIFVKTIYPEGTAAADGRLREGDEILEVNGVLMNELTHDEAIQIFKQVRKGVLTLTVRTCLRGPSLSHSQSGDAHLSRSWSTSSTADFSRGTCSSSELDNMLFLQKMPHPNDRIIMEVTLFKEDGVGLGIGLCSVCTRLQPSGIYIHTLSPGSVAHLDGRLRCGDRILKINTTSVHNLTLNEVYTLLQHCKSGPNNLMISRHPDPLISEQQFNEAILLTVESARFSKDSNPSSTQGQRKSEACFHRKQNWERYTDRSFIKKSQKPMTRSSSDSSYFNSAATNNGTIFYINHSKGFQPGSVGQIDTHTDSLGFTSQNGPEQSPNSTKDLHSVKINSRELETCATEMTERNINDSKMVCPPTPPLRTGSSLQKDPLDTEVNGSLHMHRKDGPSQRDLYQEVKNLKPQEDKAVCIHGNVLTPVLPGDQHLTVLDSNPLKLKGANQANCPVRPLLRRQACVNPFCEGEKQEACNQTAEDTGNLQPRSIFAMIEDLGGETVHNVMSEKQATAQSQGLSNQSVCPQRAEDQDGAESKHSLFTKELCNEDGSVENSSSHSTLSKSTASHKNEMSDSLSPPEALEEVASKQVNVIQTDVAVEGRTSESSPNYAFSSHSQIRGSRNDQTETSPSDDPKVQGSATVHLSETSRDQASLMDGLKAEGSATTSATERTSVKKGPPVAPKPVWSRQSLKASRTGVDVPDIMTKSSKERRFGSPRNVAPQAQSIRQRIYSFETLSSADTPDKGNKKDTCSPSLVSAKTVERTISAPSGERDSKVQPLSPVTANLPPDNGKTVTVSHKMGAEEPAVAQDGKISSSCGPRRSSSACSELSTSPCRSPQSSSQLAKSPGLRTRSFPLASNSSTDAFEVKGMREGLLSASSDKIHTISNQVSHALMKSIFAFPQSPGSWCGSLRNTCPSSPYSPSDQDLFWTDQSPLASPTVNNCQLEKGFSLSLAELRVCTFNLTDENRNEDVKREFSSSLSSCVSAQSVISSIPAEELEKLIEEVKNLDEETLKQFEDIHVVVLHKEEGSGLGFSIGGGIDLENKVTTVHRVFPNGLAAEEGTIQKGDEILSINGQSLKDVTHTEALGILRQARLPKQAVIVIHKGKEGERKLSIPTESSATDSPTSSAADGKVNTFTVEIEKNAGGLGFSLEGGKGSINGDKPLIINRIFKGGALDQSNIIQPGDELLQVNTTILQGLSRFDAWNVIKSLPDGPCSATIRRIGPISSTAKASQEAE
SIO_010081: il16
subclass of: SO_0000673
so part of: il16
location: join(4537880..4537987,4540054..4540168,4549886..4549959,4550058..4550286,4556925..4557042,4558838..4558970,4569146..4569233,4571599..4572083,4581936..4582071,4582741..4584250,4590058..4590244,4592267..4592368,4595656..4595896,4597459..4597590,4599325..4599521)
location: region:4537880-4599521:1
so has part: feature:4537880-4537987:1:exon
so has part: feature:4540054-4540168:1:exon
so has part: feature:4549886-4549959:1:exon
so has part: feature:4550058-4550286:1:exon
so has part: feature:4556925-4557042:1:exon
so has part: feature:4558838-4558970:1:exon
so has part: feature:4569146-4569233:1:exon
so has part: feature:4571599-4572083:1:exon
so has part: feature:4581936-4582071:1:exon
so has part: feature:4582741-4584250:1:exon
so has part: feature:4590058-4590244:1:exon
so has part: feature:4592267-4592368:1:exon
so has part: feature:4595656-4595896:1:exon
so has part: feature:4597459-4597590:1:exon
so has part: feature:4599325-4599521:1:exon

XP_048471982.1
type: Protein
SIO_000068: ncbiprotein

position:4537880:1
position: 4537880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4599521:1
position: 4599521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4537880-4537987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4540054-4540168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4549886-4549959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4550058-4550286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4556925-4557042:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4558838-4558970:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4569146-4569233:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4571599-4572083:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4581936-4582071:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4582741-4584250:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4590058-4590244:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4592267-4592368:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4595656-4595896:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4597459-4597590:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4599325-4599521:1:exon

stard5
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: stard5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4603948..4652318)
location: region:4603948-4652318:-1
so has part: feature:4603948-4652318:-1:exon
subclass of: SO_0000010

109921432
type: Gene
SIO_000068: ncbigene

position:4603948:-1
position: 4603948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4652318:-1
position: 4652318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4603948-4652318:-1:exon

stard5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: stard5
product: StAR-related lipid transfer (START) domain containing 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048615716.1
SIO_010081: stard5
subclass of: SO_0000673
so part of: stard5
location: complement(join(4603948..4606005,4609773..4609866,4615267..4615384,4620616..4620636,4627091..4627223,4630828..4630877,4640365..4640788,4650895..4651037,4651657..4651796,4652303..4652318))
location: region:4603948-4652318:-1
so has part: feature:4652303-4652318:-1:exon
so has part: feature:4651657-4651796:-1:exon
so has part: feature:4650895-4651037:-1:exon
so has part: feature:4640365-4640788:-1:exon
so has part: feature:4630828-4630877:-1:exon
so has part: feature:4627091-4627223:-1:exon
so has part: feature:4620616-4620636:-1:exon
so has part: feature:4615267-4615384:-1:exon
so has part: feature:4609773-4609866:-1:exon
so has part: feature:4603948-4606005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4652303-4652318:-1:exon

position:4652303:-1
position: 4652303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4651657-4651796:-1:exon

position:4651657:-1
position: 4651657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4651796:-1
position: 4651796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4650895-4651037:-1:exon

position:4650895:-1
position: 4650895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4651037:-1
position: 4651037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4640365-4640788:-1:exon

position:4640365:-1
position: 4640365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640788:-1
position: 4640788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4630828-4630877:-1:exon

position:4630828:-1
position: 4630828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4630877:-1
position: 4630877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4627091-4627223:-1:exon

position:4627091:-1
position: 4627091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4627223:-1
position: 4627223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4620616-4620636:-1:exon

position:4620616:-1
position: 4620616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620636:-1
position: 4620636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4615267-4615384:-1:exon

position:4615267:-1
position: 4615267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4615384:-1
position: 4615384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4609773-4609866:-1:exon

position:4609773:-1
position: 4609773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4609866:-1
position: 4609866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4603948-4606005:-1:exon

position:4606005:-1
position: 4606005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

stard5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: stard5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroidogenic acute regulatory protein, mitochondrial
translation: MVLCVEKATGLPNIDIETNDELDFSFEKAKIKTCQTEICEQATAWDCYFARQETEVDDFTINQNFGTRQGEYMGTLHRLLIFRKDQQKVKNLWHDLGTLISQLGTWLTDDWLCCLSITADRGPVAWPDGGCSPGVSALTGTPAAGSALGLQVPVYSASLPACRPAGHLVGAGGRSSCREAAWPARGSGQDRSPTAAFAACPLVETPLSAGGMNYRAVADTVAEKLLGYSRDDTGWRVCKRTNEVCVSWRPSSEYSGNLYKGEGIIKAAPKDVWECLKPVPEGPRVKWDKNVKSFELIEMINDGLSGHLQTVSVCRTVTPSAAVGLISPRDFVDVILIKQYENGTISSNATHVEHPNCPPKPHYVRGFNHPCGCFCAPIAGEPLKTHLTMFFQTDLGGYLPQSVLESFFPSSMVEFYSNLAKAVKIFKA
SIO_010081: stard5
subclass of: SO_0000673
so part of: stard5
location: complement(join(4605858..4606005,4609773..4609866,4615267..4615384,4620616..4620636,4627091..4627223,4630828..4630877,4640365..4640788,4650895..4651037,4651657..4651796,4652303..4652318))
location: region:4605858-4652318:-1
so has part: feature:4652303-4652318:-1:exon
so has part: feature:4651657-4651796:-1:exon
so has part: feature:4650895-4651037:-1:exon
so has part: feature:4640365-4640788:-1:exon
so has part: feature:4630828-4630877:-1:exon
so has part: feature:4627091-4627223:-1:exon
so has part: feature:4620616-4620636:-1:exon
so has part: feature:4615267-4615384:-1:exon
so has part: feature:4609773-4609866:-1:exon
so has part: feature:4605858-4606005:-1:exon

XP_048471673.1
type: Protein
SIO_000068: ncbiprotein

position:4605858:-1
position: 4605858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4652303-4652318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4651657-4651796:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4650895-4651037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4640365-4640788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4630828-4630877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4627091-4627223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4620616-4620636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4615267-4615384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4609773-4609866:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4605858-4606005:-1:exon

LOC109917311
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109917311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4671313..4725238)
location: region:4671313-4725238:-1
so has part: feature:4671313-4725238:-1:exon
subclass of: SO_0000010

109917311
type: Gene
SIO_000068: ncbigene

position:4671313:-1
position: 4671313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4725238:-1
position: 4725238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4671313-4725238:-1:exon

LOC109917311
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109917311
product: transmembrane channel-like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048615953.1
SIO_010081: LOC109917311
subclass of: SO_0000673
so part of: LOC109917311
location: complement(join(4671313..4673602,4681828..4682083,4684510..4684552,4684652..4684730,4686307..4686432,4686560..4686670,4690779..4690907,4693852..4693919,4694005..4694133,4694700..4694921,4702582..4702660,4704801..4704910,4704995..4705142,4705946..4705989,4706437..4706584,4708020..4708162,4708278..4708376,4709837..4709943,4711223..4711304,4711740..4711815,4723762..4723908,4724998..4725238))
location: region:4671313-4725238:-1
so has part: feature:4724998-4725238:-1:exon
so has part: feature:4723762-4723908:-1:exon
so has part: feature:4711740-4711815:-1:exon
so has part: feature:4711223-4711304:-1:exon
so has part: feature:4709837-4709943:-1:exon
so has part: feature:4708278-4708376:-1:exon
so has part: feature:4708020-4708162:-1:exon
so has part: feature:4706437-4706584:-1:exon
so has part: feature:4705946-4705989:-1:exon
so has part: feature:4704995-4705142:-1:exon
so has part: feature:4704801-4704910:-1:exon
so has part: feature:4702582-4702660:-1:exon
so has part: feature:4694700-4694921:-1:exon
so has part: feature:4694005-4694133:-1:exon
so has part: feature:4693852-4693919:-1:exon
so has part: feature:4690779-4690907:-1:exon
so has part: feature:4686560-4686670:-1:exon
so has part: feature:4686307-4686432:-1:exon
so has part: feature:4684652-4684730:-1:exon
so has part: feature:4684510-4684552:-1:exon
so has part: feature:4681828-4682083:-1:exon
so has part: feature:4671313-4673602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4724998-4725238:-1:exon

position:4724998:-1
position: 4724998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4723762-4723908:-1:exon

position:4723762:-1
position: 4723762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4723908:-1
position: 4723908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4711740-4711815:-1:exon

position:4711740:-1
position: 4711740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4711815:-1
position: 4711815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4711223-4711304:-1:exon

position:4711223:-1
position: 4711223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4711304:-1
position: 4711304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4709837-4709943:-1:exon

position:4709837:-1
position: 4709837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4709943:-1
position: 4709943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4708278-4708376:-1:exon

position:4708278:-1
position: 4708278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4708376:-1
position: 4708376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4708020-4708162:-1:exon

position:4708020:-1
position: 4708020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4708162:-1
position: 4708162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4706437-4706584:-1:exon

position:4706437:-1
position: 4706437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4706584:-1
position: 4706584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4705946-4705989:-1:exon

position:4705946:-1
position: 4705946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4705989:-1
position: 4705989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4704995-4705142:-1:exon

position:4704995:-1
position: 4704995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4705142:-1
position: 4705142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4704801-4704910:-1:exon

position:4704801:-1
position: 4704801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4704910:-1
position: 4704910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4702582-4702660:-1:exon

position:4702582:-1
position: 4702582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4702660:-1
position: 4702660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4694700-4694921:-1:exon

position:4694700:-1
position: 4694700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4694921:-1
position: 4694921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4694005-4694133:-1:exon

position:4694005:-1
position: 4694005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4694133:-1
position: 4694133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4693852-4693919:-1:exon

position:4693852:-1
position: 4693852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4693919:-1
position: 4693919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4690779-4690907:-1:exon

position:4690779:-1
position: 4690779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4690907:-1
position: 4690907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4686560-4686670:-1:exon

position:4686560:-1
position: 4686560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4686670:-1
position: 4686670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4686307-4686432:-1:exon

position:4686307:-1
position: 4686307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4686432:-1
position: 4686432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4684652-4684730:-1:exon

position:4684652:-1
position: 4684652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4684730:-1
position: 4684730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4684510-4684552:-1:exon

position:4684510:-1
position: 4684510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4684552:-1
position: 4684552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4681828-4682083:-1:exon

position:4681828:-1
position: 4681828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4682083:-1
position: 4682083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4671313-4673602:-1:exon

position:4673602:-1
position: 4673602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109917311
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109917311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane channel-like protein 3
translation: MTEAASNKSSKTSQRLKNIRKNSISRRIYSAAYEEHENSNSEDDEQDDEKADCKDPEEIFQNIQIQKEIISNIRCRPWSMRQKLKALRQAKEIVLKYEGRLTRTRGYQAAGAEIWKKFGRLVCNITVLFIPWEMRIKKIESHFGSGVASYFIFLRWMFGINIVLTIMTGAFVILPELLAGAPFGSIPSKTIPAGYVASAQDLDTIWSLGGYLQYSVMFYGYYGNERKIGRAGYRLPLAYFTVGMAVFAYSFIILLRKMAKNSQLSMASASDENYTFCWKIFCAWDYLIGNPEAAESKTAAVINNIREAILEEQVKRKDRSLAVVISLRILANILVLLSLAGSIYIIYFVVDRSQELERTKAELSLWEKNEVSVVVSLITMIAPSVFELVAQLEMLHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVNSMSMTDNSNDTGTAFLATRVLPEEESLSTIVPEIRLRWNSSFGSEDNKTKPLTKYNRTALFDYNVLSQQDQCWETYVGQEMLKLSIIDMLFTVGSILLIDFIRGLFVRFLSDCWCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMTLFMLFLCMLPTVFAIARYRPSPSCGPFSGQDKIYDIVSETIVNDFPVWFNTVMSYVTSPVVALPALLLLFMLIYYLQSIARSLKFTNNQLRMQLQVERTEDKKKVFQMAVARFQHLEDGDKKTERESEVDSQESLIQSSPRRNGSVANVDSPVSAGSHILSISQQLAHADVPQIPSLTHTPTAAASRHKREHAFPRNPGGLQGAASGPHRGKLSSSCATKLPEDIRPDAPFRKCVRPLHYSPAEGAPQMILGRRVHTARYILVNEREPRKRLMRSVTRLPRHYKVDETRGAVEMLPRNLKRYAFHAGHRTNPQLHVSEEEEDEDELERGTFSRSPRPHSLSDLHQPTRFYIGDSKDSRILVGKDVAQIQYEYEDSEPQQDCAGPGSSHVQWTSKGLAPSQQGAGAPIKWKTKHKAEQSLTESDSASIASSSDQQNSSTDQYIQVIHTKDKYLKTSNENLSRSKSRVSIELNAAEANELICSNV
SIO_010081: LOC109917311
subclass of: SO_0000673
so part of: LOC109917311
location: complement(join(4672738..4673602,4681828..4682083,4684510..4684552,4684652..4684730,4686307..4686432,4686560..4686670,4690779..4690907,4693852..4693919,4694005..4694133,4694700..4694921,4702582..4702660,4704801..4704910,4704995..4705142,4705946..4705989,4706437..4706584,4708020..4708162,4708278..4708376,4709837..4709943,4711223..4711304,4711740..4711815,4723762..4723908,4724998..4725113))
location: region:4672738-4725113:-1
so has part: feature:4724998-4725113:-1:exon
so has part: feature:4723762-4723908:-1:exon
so has part: feature:4711740-4711815:-1:exon
so has part: feature:4711223-4711304:-1:exon
so has part: feature:4709837-4709943:-1:exon
so has part: feature:4708278-4708376:-1:exon
so has part: feature:4708020-4708162:-1:exon
so has part: feature:4706437-4706584:-1:exon
so has part: feature:4705946-4705989:-1:exon
so has part: feature:4704995-4705142:-1:exon
so has part: feature:4704801-4704910:-1:exon
so has part: feature:4702582-4702660:-1:exon
so has part: feature:4694700-4694921:-1:exon
so has part: feature:4694005-4694133:-1:exon
so has part: feature:4693852-4693919:-1:exon
so has part: feature:4690779-4690907:-1:exon
so has part: feature:4686560-4686670:-1:exon
so has part: feature:4686307-4686432:-1:exon
so has part: feature:4684652-4684730:-1:exon
so has part: feature:4684510-4684552:-1:exon
so has part: feature:4681828-4682083:-1:exon
so has part: feature:4672738-4673602:-1:exon

XP_048471910.1
type: Protein
SIO_000068: ncbiprotein

position:4672738:-1
position: 4672738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4725113:-1
position: 4725113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4724998-4725113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4723762-4723908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4711740-4711815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4711223-4711304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4709837-4709943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4708278-4708376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4708020-4708162:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706437-4706584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4705946-4705989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4704995-4705142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4704801-4704910:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4702582-4702660:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4694700-4694921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4694005-4694133:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4693852-4693919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4690779-4690907:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4686560-4686670:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4686307-4686432:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4684652-4684730:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4684510-4684552:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4681828-4682083:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4672738-4673602:-1:exon

mex3b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mex3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5654434..5657373)
location: region:5654434-5657373:-1
so has part: feature:5654434-5657373:-1:exon
subclass of: SO_0000010

109937470
type: Gene
SIO_000068: ncbigene

position:5654434:-1
position: 5654434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5657373:-1
position: 5657373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5654434-5657373:-1:exon

mex3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mex3b
product: mex-3 RNA binding family member B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020536049.2
SIO_010081: mex3b
subclass of: SO_0000673
so part of: mex3b
location: complement(join(5654434..5656292,5657027..5657373))
location: region:5654434-5657373:-1
so has part: feature:5657027-5657373:-1:exon
so has part: feature:5654434-5656292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5657027-5657373:-1:exon

position:5657027:-1
position: 5657027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5654434-5656292:-1:exon

position:5656292:-1
position: 5656292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mex3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mex3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein MEX3B
translation: MPSSLFTDMERNSGGSSNNNNGGGGETLDDQRALQIALDQLSLLGLDNDENSIYDNEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAAPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIELTDDNDFHANGTDVGFELGGPGSLWNKPTPGRKPFSTYRNDSSSSLGSASTDSYFSPAGRLADYSPPAHFPANGGGGSSFVYGGEPLPASLTGETERDLGFESPGFDPAPAPPAIIWSQFERSNPPGASTNGVSSAQQQRRASSVGSAGAPPPRLSPPPPPPPPPPPPPPPPLGLNGAAAGGEHHPLARRVRSDPLSGVPSTIGLVPFANGGPATALLPGGSHLAGGIPAEPSGSCSSSSSSSSSSSSSSSSSMRRKGSRDCLMCLESEVIAALVPCGHNLFCMECANRICEKTEPECPVCRKAVTQAIRIFS
SIO_010081: mex3b
subclass of: SO_0000673
so part of: mex3b
location: complement(join(5654905..5656292,5657027..5657279))
location: region:5654905-5657279:-1
so has part: feature:5657027-5657279:-1:exon
so has part: feature:5654905-5656292:-1:exon

XP_020391638.2
type: Protein
SIO_000068: ncbiprotein

position:5654905:-1
position: 5654905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5657279:-1
position: 5657279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5657027-5657279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5654905-5656292:-1:exon

LOC125486825
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5779951..5835644
location: region:5779951-5835644:1
so has part: feature:5779951-5835644:1:exon
subclass of: SO_0000011

125486825
type: Gene
SIO_000068: ncbigene

position:5779951:1
position: 5779951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5835644:1
position: 5835644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5779951-5835644:1:exon

LOC125486825
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125486825
product: uncharacterized LOC125486825
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007265453.1
SIO_010081: LOC125486825
subclass of: SO_0000673
so part of: LOC125486825
location: join(5779951..5780087,5825979..5826065,5835548..5835644)
location: region:5779951-5835644:1
so has part: feature:5779951-5780087:1:exon
so has part: feature:5825979-5826065:1:exon
so has part: feature:5835548-5835644:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5779951-5780087:1:exon

position:5780087:1
position: 5780087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5825979-5826065:1:exon

position:5825979:1
position: 5825979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5826065:1
position: 5826065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5835548-5835644:1:exon

position:5835548:1
position: 5835548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

efl1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: efl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5850565..6092833)
location: region:5850565-6092833:-1
so has part: feature:5850565-6092833:-1:exon
subclass of: SO_0000010

109918519
type: Gene
SIO_000068: ncbigene

position:5850565:-1
position: 5850565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6092833:-1
position: 6092833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5850565-6092833:-1:exon

efl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: efl1
product: elongation factor like GTPase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616009.1
SIO_010081: efl1
subclass of: SO_0000673
so part of: efl1
location: complement(join(5850565..5852570,5893559..5893743,5895588..5896615,5911535..5911682,5918160..5918291,5973182..5973314,5986989..5987161,5988414..5988559,6008532..6008631,6029200..6029322,6038291..6038427,6045205..6045284,6048711..6048834,6071222..6071436,6079199..6079336,6079638..6079771,6080714..6080798,6085538..6085605,6091725..6091828,6092728..6092833))
location: region:5850565-6092833:-1
so has part: feature:6092728-6092833:-1:exon
so has part: feature:6091725-6091828:-1:exon
so has part: feature:6085538-6085605:-1:exon
so has part: feature:6080714-6080798:-1:exon
so has part: feature:6079638-6079771:-1:exon
so has part: feature:6079199-6079336:-1:exon
so has part: feature:6071222-6071436:-1:exon
so has part: feature:6048711-6048834:-1:exon
so has part: feature:6045205-6045284:-1:exon
so has part: feature:6038291-6038427:-1:exon
so has part: feature:6029200-6029322:-1:exon
so has part: feature:6008532-6008631:-1:exon
so has part: feature:5988414-5988559:-1:exon
so has part: feature:5986989-5987161:-1:exon
so has part: feature:5973182-5973314:-1:exon
so has part: feature:5918160-5918291:-1:exon
so has part: feature:5911535-5911682:-1:exon
so has part: feature:5895588-5896615:-1:exon
so has part: feature:5893559-5893743:-1:exon
so has part: feature:5850565-5852570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6092728-6092833:-1:exon

position:6092728:-1
position: 6092728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6091725-6091828:-1:exon

position:6091725:-1
position: 6091725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6091828:-1
position: 6091828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6085538-6085605:-1:exon

position:6085538:-1
position: 6085538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6085605:-1
position: 6085605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6080714-6080798:-1:exon

position:6080714:-1
position: 6080714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6080798:-1
position: 6080798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6079638-6079771:-1:exon

position:6079638:-1
position: 6079638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6079771:-1
position: 6079771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6079199-6079336:-1:exon

position:6079199:-1
position: 6079199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6079336:-1
position: 6079336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6071222-6071436:-1:exon

position:6071222:-1
position: 6071222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6071436:-1
position: 6071436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6048711-6048834:-1:exon

position:6048711:-1
position: 6048711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6048834:-1
position: 6048834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6045205-6045284:-1:exon

position:6045205:-1
position: 6045205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6045284:-1
position: 6045284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6038291-6038427:-1:exon

position:6038291:-1
position: 6038291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6038427:-1
position: 6038427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6029200-6029322:-1:exon

position:6029200:-1
position: 6029200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6029322:-1
position: 6029322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6008532-6008631:-1:exon

position:6008532:-1
position: 6008532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6008631:-1
position: 6008631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5988414-5988559:-1:exon

position:5988414:-1
position: 5988414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5988559:-1
position: 5988559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5986989-5987161:-1:exon

position:5986989:-1
position: 5986989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5987161:-1
position: 5987161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5973182-5973314:-1:exon

position:5973182:-1
position: 5973182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5973314:-1
position: 5973314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5918160-5918291:-1:exon

position:5918160:-1
position: 5918160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5918291:-1
position: 5918291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5911535-5911682:-1:exon

position:5911535:-1
position: 5911535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5911682:-1
position: 5911682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5895588-5896615:-1:exon

position:5895588:-1
position: 5895588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5896615:-1
position: 5896615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5893559-5893743:-1:exon

position:5893559:-1
position: 5893559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5893743:-1
position: 5893743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5850565-5852570:-1:exon

position:5852570:-1
position: 5852570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

efl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: efl1
product: elongation factor like GTPase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616010.1
SIO_010081: efl1
subclass of: SO_0000673
so part of: efl1
location: complement(join(5850565..5852570,5893559..5893743,5895588..5896615,5911535..5911682,5918160..5918291,5973182..5973314,5986989..5987161,5988414..5988559,6008532..6008631,6029200..6029322,6038291..6038427,6045205..6045284,6048711..6048834,6071222..6071436,6079199..6079336,6079638..6079771,6080714..6080798,6085538..6085605,6091725..6091828,6092664..6092711))
location: region:5850565-6092711:-1
so has part: feature:6092664-6092711:-1:exon
so has part: feature:6091725-6091828:-1:exon
so has part: feature:6085538-6085605:-1:exon
so has part: feature:6080714-6080798:-1:exon
so has part: feature:6079638-6079771:-1:exon
so has part: feature:6079199-6079336:-1:exon
so has part: feature:6071222-6071436:-1:exon
so has part: feature:6048711-6048834:-1:exon
so has part: feature:6045205-6045284:-1:exon
so has part: feature:6038291-6038427:-1:exon
so has part: feature:6029200-6029322:-1:exon
so has part: feature:6008532-6008631:-1:exon
so has part: feature:5988414-5988559:-1:exon
so has part: feature:5986989-5987161:-1:exon
so has part: feature:5973182-5973314:-1:exon
so has part: feature:5918160-5918291:-1:exon
so has part: feature:5911535-5911682:-1:exon
so has part: feature:5895588-5896615:-1:exon
so has part: feature:5893559-5893743:-1:exon
so has part: feature:5850565-5852570:-1:exon

position:6092711:-1
position: 6092711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6092664-6092711:-1:exon

position:6092664:-1
position: 6092664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6091725-6091828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6085538-6085605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6080714-6080798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6079638-6079771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6079199-6079336:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6071222-6071436:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6048711-6048834:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6045205-6045284:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6038291-6038427:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6029200-6029322:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6008532-6008631:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5988414-5988559:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5986989-5987161:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5973182-5973314:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5918160-5918291:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5911535-5911682:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5895588-5896615:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5893559-5893743:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5850565-5852570:-1:exon

efl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: efl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor-like GTPase 1
translation: MGHTNLENIVDLQKNTANIRNICIVAHVDHGKTTLADSLIASNGIISNRLAGKLRYMDSREDEQLRGITMKSSSISLHFTTNNQEYLINMIDSPGHVDFSSEVSTAVRVCDGAVVVVDVVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLIMELKLTPLEAYIHLQKILEQVNAVTGSLFTSKVLEERAEMEETEKPSSDTQSSEHFYDWSAGLEETDDSHLYFAPDQGNVVFGSAIDGWGFRIEQFAQMYSQKVGISAQVLLKTLWGDFYLNTKAKKIMKGAQSKGKKPLFVQLVLENIWSLYESVVVRRDKEKIDKIVSSLGLTILPRDSRHTDPKVHLNAICTQWLPISHAVLSMVCNKLPSPLDIAAERVEKLMCVRSRRFDSLPPQVQALKQAFLECKSDETAPVIVFICKMFAVDSKALPQNKLRPLSQAEIAQRREQARKRHAEKLINQMQKLEQNPPEKTLEISPVSASIKGMHAESPMELADLTTCREESQQKECFIAFARVYSGTIRRGQKLFVLGPKYDPSEALTKMPEGCSLNDDVSIPHLACCTVEDLFLLMGKELENVEEVPVGNVLGIGRLEDYVLKSATLSTSPLCPPFTPLNFEATPIVRVAVEPKHPSEMPQLVRGMKLLNQADPCVEVLVQETGEHVLITAGEVHLQRCLDDLRERFAKVEISSSAPIVPFRETIIRPPKVDMVNEDIGTQQKIAVIHQKKEDQNKYPEGVIVDSDGLVTLNTPNKLSTLSVRAMPLPEAVTQLLEESSDLIRTIEQFNLSVKEGRDTQEINPTTLEAIQKFKQKLEENFVGRKWRNAVNQISSFGPRRCGPNILLNRLENYHRPSMWQCLDKTRKDLGTYKDFDNSIISGFQLATLSGPVCEEPLMGVCFILENWDMSKVQQLVQIHNQSFTDGQTAKVEEFQQQVTSNESSLSELEPRLENQARPGDQIQDSRTPAESVADGQSNSEVVLTDCYGPFSGQLIATMKEACRFAFQARPQRLMAAMYTCEIMATAEVLGRVYAVLSKRTGRVLQEEMKEGTEMFIIKAILPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDPYWVPTTEEEYLHFGEKADTVNQANKYMNTVRKRKGLYVEEKIVEHAEKQRTLSKNK
SIO_010081: efl1
subclass of: SO_0000673
so part of: efl1
location: complement(join(5852382..5852570,5893559..5893743,5895588..5896615,5911535..5911682,5918160..5918291,5973182..5973314,5986989..5987161,5988414..5988559,6008532..6008631,6029200..6029322,6038291..6038427,6045205..6045284,6048711..6048834,6071222..6071436,6079199..6079336,6079638..6079771,6080714..6080798,6085538..6085605,6091725..6091815))
location: region:5852382-6091815:-1
so has part: feature:6091725-6091815:-1:exon
so has part: feature:6085538-6085605:-1:exon
so has part: feature:6080714-6080798:-1:exon
so has part: feature:6079638-6079771:-1:exon
so has part: feature:6079199-6079336:-1:exon
so has part: feature:6071222-6071436:-1:exon
so has part: feature:6048711-6048834:-1:exon
so has part: feature:6045205-6045284:-1:exon
so has part: feature:6038291-6038427:-1:exon
so has part: feature:6029200-6029322:-1:exon
so has part: feature:6008532-6008631:-1:exon
so has part: feature:5988414-5988559:-1:exon
so has part: feature:5986989-5987161:-1:exon
so has part: feature:5973182-5973314:-1:exon
so has part: feature:5918160-5918291:-1:exon
so has part: feature:5911535-5911682:-1:exon
so has part: feature:5895588-5896615:-1:exon
so has part: feature:5893559-5893743:-1:exon
so has part: feature:5852382-5852570:-1:exon

XP_048471966.1
type: Protein
SIO_000068: ncbiprotein

position:5852382:-1
position: 5852382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6091815:-1
position: 6091815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6091725-6091815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6085538-6085605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6080714-6080798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6079638-6079771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6079199-6079336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6071222-6071436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6048711-6048834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6045205-6045284:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6038291-6038427:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6029200-6029322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6008532-6008631:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5988414-5988559:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5986989-5987161:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5973182-5973314:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5918160-5918291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5911535-5911682:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5895588-5896615:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5893559-5893743:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5852382-5852570:-1:exon

efl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: efl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor-like GTPase 1
translation: MGHTNLENIVDLQKNTANIRNICIVAHVDHGKTTLADSLIASNGIISNRLAGKLRYMDSREDEQLRGITMKSSSISLHFTTNNQEYLINMIDSPGHVDFSSEVSTAVRVCDGAVVVVDVVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLIMELKLTPLEAYIHLQKILEQVNAVTGSLFTSKVLEERAEMEETEKPSSDTQSSEHFYDWSAGLEETDDSHLYFAPDQGNVVFGSAIDGWGFRIEQFAQMYSQKVGISAQVLLKTLWGDFYLNTKAKKIMKGAQSKGKKPLFVQLVLENIWSLYESVVVRRDKEKIDKIVSSLGLTILPRDSRHTDPKVHLNAICTQWLPISHAVLSMVCNKLPSPLDIAAERVEKLMCVRSRRFDSLPPQVQALKQAFLECKSDETAPVIVFICKMFAVDSKALPQNKLRPLSQAEIAQRREQARKRHAEKLINQMQKLEQNPPEKTLEISPVSASIKGMHAESPMELADLTTCREESQQKECFIAFARVYSGTIRRGQKLFVLGPKYDPSEALTKMPEGCSLNDDVSIPHLACCTVEDLFLLMGKELENVEEVPVGNVLGIGRLEDYVLKSATLSTSPLCPPFTPLNFEATPIVRVAVEPKHPSEMPQLVRGMKLLNQADPCVEVLVQETGEHVLITAGEVHLQRCLDDLRERFAKVEISSSAPIVPFRETIIRPPKVDMVNEDIGTQQKIAVIHQKKEDQNKYPEGVIVDSDGLVTLNTPNKLSTLSVRAMPLPEAVTQLLEESSDLIRTIEQFNLSVKEGRDTQEINPTTLEAIQKFKQKLEENFVGRKWRNAVNQISSFGPRRCGPNILLNRLENYHRPSMWQCLDKTRKDLGTYKDFDNSIISGFQLATLSGPVCEEPLMGVCFILENWDMSKVQQLVQIHNQSFTDGQTAKVEEFQQQVTSNESSLSELEPRLENQARPGDQIQDSRTPAESVADGQSNSEVVLTDCYGPFSGQLIATMKEACRFAFQARPQRLMAAMYTCEIMATAEVLGRVYAVLSKRTGRVLQEEMKEGTEMFIIKAILPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDPYWVPTTEEEYLHFGEKADTVNQANKYMNTVRKRKGLYVEEKIVEHAEKQRTLSKNK
SIO_010081: efl1
subclass of: SO_0000673
so part of: efl1
location: complement(join(5852382..5852570,5893559..5893743,5895588..5896615,5911535..5911682,5918160..5918291,5973182..5973314,5986989..5987161,5988414..5988559,6008532..6008631,6029200..6029322,6038291..6038427,6045205..6045284,6048711..6048834,6071222..6071436,6079199..6079336,6079638..6079771,6080714..6080798,6085538..6085605,6091725..6091815))
location: region:5852382-6091815:-1
so has part: feature:6091725-6091815:-1:exon
so has part: feature:6085538-6085605:-1:exon
so has part: feature:6080714-6080798:-1:exon
so has part: feature:6079638-6079771:-1:exon
so has part: feature:6079199-6079336:-1:exon
so has part: feature:6071222-6071436:-1:exon
so has part: feature:6048711-6048834:-1:exon
so has part: feature:6045205-6045284:-1:exon
so has part: feature:6038291-6038427:-1:exon
so has part: feature:6029200-6029322:-1:exon
so has part: feature:6008532-6008631:-1:exon
so has part: feature:5988414-5988559:-1:exon
so has part: feature:5986989-5987161:-1:exon
so has part: feature:5973182-5973314:-1:exon
so has part: feature:5918160-5918291:-1:exon
so has part: feature:5911535-5911682:-1:exon
so has part: feature:5895588-5896615:-1:exon
so has part: feature:5893559-5893743:-1:exon
so has part: feature:5852382-5852570:-1:exon

XP_048471967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6091725-6091815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6085538-6085605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6080714-6080798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6079638-6079771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6079199-6079336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6071222-6071436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6048711-6048834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6045205-6045284:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6038291-6038427:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6029200-6029322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6008532-6008631:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5988414-5988559:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5986989-5987161:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5973182-5973314:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5918160-5918291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5911535-5911682:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5895588-5896615:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5893559-5893743:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5852382-5852570:-1:exon

saxo2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: saxo2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6093055..6129989
location: region:6093055-6129989:1
so has part: feature:6093055-6129989:1:exon
subclass of: SO_0000010

109918518
type: Gene
SIO_000068: ncbigene

position:6093055:1
position: 6093055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6129989:1
position: 6129989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6093055-6129989:1:exon

saxo2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: saxo2
product: stabilizer of axonemal microtubules 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020518452.2
SIO_010081: saxo2
subclass of: SO_0000673
so part of: saxo2
location: join(6093055..6093130,6114235..6114414,6127782..6127984,6128956..6129989)
location: region:6093055-6129989:1
so has part: feature:6093055-6093130:1:exon
so has part: feature:6114235-6114414:1:exon
so has part: feature:6127782-6127984:1:exon
so has part: feature:6128956-6129989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6093055-6093130:1:exon

position:6093130:1
position: 6093130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6114235-6114414:1:exon

position:6114235:1
position: 6114235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6114414:1
position: 6114414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6127782-6127984:1:exon

position:6127782:1
position: 6127782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6127984:1
position: 6127984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6128956-6129989:1:exon

position:6128956:1
position: 6128956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

saxo2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: saxo2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stabilizer of axonemal microtubules 2
translation: MTRKCICEICNCGRHHCPHMPTGFHDKTLQPCMLTEYHEKYPSYGDIKPRENYKPKPEISSKRGKMDGTSTFRTDYIPHEITQRPQPMQHDYRPKSGEMDHHTTYKVDFSPHKIKPAKSIRPPQPKPGKGGRIDTVPTYKDDYRLWDIPKRKPKPMEPYCPPTSRFGNPSTFQDDFGPKGYALRESFKPPDAPRVSDVPFDGLTNHKIAYVPHPLGERYVRPPDEYKPSDTPFDSTTTHRRDFRGLHGDPTKSFKPDPGKIGSDAPFDGNSEFRDRFQAWPITLPYVHKHPDYVQPEGPMDLNSTSHLDYVGYKVKPPTPFKPVLTRRVHAPFQGSTTMKDDFKTWDVKKPEIIKRVEEMGIPNAKFDGLTTFKANYVPHPIKPTQSFKPSDTPLHSSIPFDAGTLYRTEYTPKRLEICPASYPTPPGYVYESTDARGHKFFHKMTPSEEKLAVSNEMYLPKEVAVAS
SIO_010081: saxo2
subclass of: SO_0000673
so part of: saxo2
location: join(6093093..6093130,6114235..6114414,6127782..6127984,6128956..6129941)
location: region:6093093-6129941:1
so has part: feature:6093093-6093130:1:exon
so has part: feature:6114235-6114414:1:exon
so has part: feature:6127782-6127984:1:exon
so has part: feature:6128956-6129941:1:exon

XP_020374041.1
type: Protein
SIO_000068: ncbiprotein

position:6093093:1
position: 6093093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6129941:1
position: 6129941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6093093-6093130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6114235-6114414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6127782-6127984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6128956-6129941:1:exon

adamtsl3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: adamtsl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6157350..6731216)
location: region:6157350-6731216:-1
so has part: feature:6157350-6731216:-1:exon
subclass of: SO_0000010

109917516
type: Gene
SIO_000068: ncbigene

position:6157350:-1
position: 6157350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6731216:-1
position: 6731216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6157350-6731216:-1:exon

adamtsl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: adamtsl3
product: ADAMTS-like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048616129.1
SIO_010081: adamtsl3
subclass of: SO_0000673
so part of: adamtsl3
location: complement(join(6157350..6159227,6159487..6159701,6160028..6160137,6163114..6163321,6179914..6180097,6187698..6187910,6190528..6190647,6195618..6195800,6197865..6197993,6206877..6207004,6245094..6246210,6253426..6253579,6256318..6256497,6257727..6257937,6295095..6295224,6299332..6299630,6302804..6302888,6305223..6305370,6305840..6306044,6320147..6320197,6324509..6324647,6325469..6325580,6359794..6359951,6404510..6404584,6414985..6415111,6439873..6440109,6467644..6467689,6490927..6491054,6665133..6665252,6730497..6730588,6731071..6731216))
location: region:6157350-6731216:-1
so has part: feature:6731071-6731216:-1:exon
so has part: feature:6730497-6730588:-1:exon
so has part: feature:6665133-6665252:-1:exon
so has part: feature:6490927-6491054:-1:exon
so has part: feature:6467644-6467689:-1:exon
so has part: feature:6439873-6440109:-1:exon
so has part: feature:6414985-6415111:-1:exon
so has part: feature:6404510-6404584:-1:exon
so has part: feature:6359794-6359951:-1:exon
so has part: feature:6325469-6325580:-1:exon
so has part: feature:6324509-6324647:-1:exon
so has part: feature:6320147-6320197:-1:exon
so has part: feature:6305840-6306044:-1:exon
so has part: feature:6305223-6305370:-1:exon
so has part: feature:6302804-6302888:-1:exon
so has part: feature:6299332-6299630:-1:exon
so has part: feature:6295095-6295224:-1:exon
so has part: feature:6257727-6257937:-1:exon
so has part: feature:6256318-6256497:-1:exon
so has part: feature:6253426-6253579:-1:exon
so has part: feature:6245094-6246210:-1:exon
so has part: feature:6206877-6207004:-1:exon
so has part: feature:6197865-6197993:-1:exon
so has part: feature:6195618-6195800:-1:exon
so has part: feature:6190528-6190647:-1:exon
so has part: feature:6187698-6187910:-1:exon
so has part: feature:6179914-6180097:-1:exon
so has part: feature:6163114-6163321:-1:exon
so has part: feature:6160028-6160137:-1:exon
so has part: feature:6159487-6159701:-1:exon
so has part: feature:6157350-6159227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6731071-6731216:-1:exon

position:6731071:-1
position: 6731071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6730497-6730588:-1:exon

position:6730497:-1
position: 6730497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6730588:-1
position: 6730588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6665133-6665252:-1:exon

position:6665133:-1
position: 6665133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6665252:-1
position: 6665252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6490927-6491054:-1:exon

position:6490927:-1
position: 6490927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6491054:-1
position: 6491054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6467644-6467689:-1:exon

position:6467644:-1
position: 6467644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6467689:-1
position: 6467689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6439873-6440109:-1:exon

position:6439873:-1
position: 6439873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6440109:-1
position: 6440109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6414985-6415111:-1:exon

position:6414985:-1
position: 6414985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6415111:-1
position: 6415111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6404510-6404584:-1:exon

position:6404510:-1
position: 6404510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6404584:-1
position: 6404584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6359794-6359951:-1:exon

position:6359794:-1
position: 6359794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6359951:-1
position: 6359951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6325469-6325580:-1:exon

position:6325469:-1
position: 6325469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6325580:-1
position: 6325580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6324509-6324647:-1:exon

position:6324509:-1
position: 6324509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6324647:-1
position: 6324647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6320147-6320197:-1:exon

position:6320147:-1
position: 6320147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6320197:-1
position: 6320197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6305840-6306044:-1:exon

position:6305840:-1
position: 6305840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6306044:-1
position: 6306044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6305223-6305370:-1:exon

position:6305223:-1
position: 6305223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6305370:-1
position: 6305370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6302804-6302888:-1:exon

position:6302804:-1
position: 6302804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6302888:-1
position: 6302888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6299332-6299630:-1:exon

position:6299332:-1
position: 6299332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6299630:-1
position: 6299630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6295095-6295224:-1:exon

position:6295095:-1
position: 6295095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6295224:-1
position: 6295224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6257727-6257937:-1:exon

position:6257727:-1
position: 6257727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6257937:-1
position: 6257937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6256318-6256497:-1:exon

position:6256318:-1
position: 6256318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6256497:-1
position: 6256497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6253426-6253579:-1:exon

position:6253426:-1
position: 6253426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6253579:-1
position: 6253579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6245094-6246210:-1:exon

position:6245094:-1
position: 6245094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6246210:-1
position: 6246210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6206877-6207004:-1:exon

position:6206877:-1
position: 6206877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6207004:-1
position: 6207004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6197865-6197993:-1:exon

position:6197865:-1
position: 6197865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6197993:-1
position: 6197993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6195618-6195800:-1:exon

position:6195618:-1
position: 6195618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6195800:-1
position: 6195800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6190528-6190647:-1:exon

position:6190528:-1
position: 6190528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6190647:-1
position: 6190647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6187698-6187910:-1:exon

position:6187698:-1
position: 6187698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6187910:-1
position: 6187910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6179914-6180097:-1:exon

position:6179914:-1
position: 6179914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6180097:-1
position: 6180097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6163114-6163321:-1:exon

position:6163114:-1
position: 6163114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6163321:-1
position: 6163321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6160028-6160137:-1:exon

position:6160028:-1
position: 6160028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6160137:-1
position: 6160137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6159487-6159701:-1:exon

position:6159487:-1
position: 6159487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6159701:-1
position: 6159701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6157350-6159227:-1:exon

position:6159227:-1
position: 6159227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

adamtsl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: adamtsl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADAMTS-like protein 3
translation: MRITGHIPIYTLLWVFLPVQGNGEQSQTVYFLPEFALSPQGSFLEDTTGEQVLTYRYDDQTSRITRSDEDKDSGWDAWGSWSDCSRTCGGGASYSLRRCLNGRRCEGRNIRYKTCSNVDCPPEAGDFRHQQCSAHNDVKYQGQYYEWIPLYNDHEAPCALKCRARGTSLIVELSPKVLDGTRCNTESLNMCISGICQVVGCDRQLGSKAKEDNCGVCAGTGSTCRLVRGQSKSHVSPEKLEDTVIAVPYGSRHVKITVKGPAHLHIESKTLQGHKGDHKLNASGISVIENTTIEFQKNSDKEVLKIQGPLGADFIIKTRYVSSKDSIVQFMFYQPISHQWRETDFYPCTATCGGGYQLSSAECVDIRSGRVVPEHSCNYYPENKKPKPKLQECNMDDCPSSDGFKQLAIYDHFQPLPRWESNPWTACSVFCGGGIQTRSVPCVEENMYGEIIPVEEWKCMYAFKPAVIQNCNLFDCPKWIAMEWSPCTVTCGRGLRYRVVLCIDYRGQHTGGCSSQLKPHIKEECTVPIPCYKTKEKLPVEAKVPWIKQAQELQEPRAASEEPTFIAEPWSQCSTSCGVGKQVRIVKCRVLLTFSQTVEELPDEECEGDKPPTEQTCFSAPCDGATAIYEMEVASYGQNDNEMEEQFDWEYEGFTPCSASCLRGKQETIVVCRNKQTQESVDDSLCDNFKRPPHMVRACGTEPCPPSWVTRSWRQCSATCGVGIQTREVYCKRMVAHAIEDSIKVADEECSDPKPPELQACNQFDCPPSWYTGEWQQCSQTCGRGLQSRKVTCKQLLTDGSFLTVADELCLDHKPQVQQPCVNTDCPPHLAVGKWSKCSVSCGEGIQSREWVCRKLSTTGQLVAVDHALCNGLSKPSVIQVCKMPNCKELKKNAKTKMPQKQAIRNPQILSVHRVYIQTRQEKRIHFTVGGRAYLLPKTSIVIRCPVRRFQKSLIRWEKDGHHLQNAKQIGITKSGSLKIHNLEARDIGVYSCIAGPIRDTFVLKLIGNDNKLVEPPSSTKAKMRQNIGPEKMSHNESNRLEDKWTQMSKMWRSWSKKNEFYVDGSQTEDNIFLRLLGHHLNSRGKANFADLYDSQELYDKHLESSIFQGAYSMDTAQFEEILRNISLWIESGELPEDFASQLMYQLAAEVSRPQATLEKWKAPLDDNATNSKFLDKAPNTSETSINKDTQQQRGKQKPPIIVRKKQAPVLPQRNVTIAIGTIAYLAENISSITLVCEAVGVPEPEVTWTKDGVPVKFNKRILLLDSARLQIKNVTSQDAGLYGCTVSSELGTDTETSLLLYSEAPVIGSLSKNVTNLTTWHLTAIVGSALFVRLGATITITCPVVGMPEPKVTWRMRGGLLGGNSVVLQNGSLVLKNVTLANHGTYDCIATNEIGQTTASTLLKLAEPRTALPFVANRQTKERKRVLMASQTGSPITVKQGDVFCIGCPVSAKHKMTISWYFRNQSIHTVPGLKYKLLARGRVLEVNTAFKKLAGQYKCLASNDTQLLSASVNVSFLDFMWVPGNWGACTATCGNTGVQQRKLLCLNTNGIEMNESACYELPKPPLLTEPCNTQDCPARWVVMSLSECSVSCGKGIRQRRVTCDQLTATGTVRTLPPVYCADSREQPAEVEDCLLQPCARWNGPAWGQCSGRCVGQNVAVQHRQIVCQYTNGTSATEITCDKIKRPASARRCKSSKCNVEWRTGPWRQCAATCGIGFQSRRVACIHKRNNETVADQYCGWKKRPTTWQRCNLTSCDTSEGGCMDTTRYCALVKRLRLCHLNTYKQRCCESCRML
SIO_010081: adamtsl3
subclass of: SO_0000673
so part of: adamtsl3
location: complement(join(6159112..6159227,6159487..6159701,6160028..6160137,6163114..6163321,6179914..6180097,6187698..6187910,6190528..6190647,6195618..6195800,6197865..6197993,6206877..6207004,6245094..6246210,6253426..6253579,6256318..6256497,6257727..6257937,6295095..6295224,6299332..6299630,6302804..6302888,6305223..6305370,6305840..6306044,6320147..6320197,6324509..6324647,6325469..6325580,6359794..6359951,6404510..6404584,6414985..6415111,6439873..6440109,6467644..6467689,6490927..6491054,6665133..6665252,6730497..6730556))
location: region:6159112-6730556:-1
so has part: feature:6730497-6730556:-1:exon
so has part: feature:6665133-6665252:-1:exon
so has part: feature:6490927-6491054:-1:exon
so has part: feature:6467644-6467689:-1:exon
so has part: feature:6439873-6440109:-1:exon
so has part: feature:6414985-6415111:-1:exon
so has part: feature:6404510-6404584:-1:exon
so has part: feature:6359794-6359951:-1:exon
so has part: feature:6325469-6325580:-1:exon
so has part: feature:6324509-6324647:-1:exon
so has part: feature:6320147-6320197:-1:exon
so has part: feature:6305840-6306044:-1:exon
so has part: feature:6305223-6305370:-1:exon
so has part: feature:6302804-6302888:-1:exon
so has part: feature:6299332-6299630:-1:exon
so has part: feature:6295095-6295224:-1:exon
so has part: feature:6257727-6257937:-1:exon
so has part: feature:6256318-6256497:-1:exon
so has part: feature:6253426-6253579:-1:exon
so has part: feature:6245094-6246210:-1:exon
so has part: feature:6206877-6207004:-1:exon
so has part: feature:6197865-6197993:-1:exon
so has part: feature:6195618-6195800:-1:exon
so has part: feature:6190528-6190647:-1:exon
so has part: feature:6187698-6187910:-1:exon
so has part: feature:6179914-6180097:-1:exon
so has part: feature:6163114-6163321:-1:exon
so has part: feature:6160028-6160137:-1:exon
so has part: feature:6159487-6159701:-1:exon
so has part: feature:6159112-6159227:-1:exon

XP_048472086.1
type: Protein
SIO_000068: ncbiprotein

position:6159112:-1
position: 6159112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6730556:-1
position: 6730556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6730497-6730556:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6665133-6665252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6490927-6491054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6467644-6467689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6439873-6440109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6414985-6415111:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6404510-6404584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6359794-6359951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6325469-6325580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6324509-6324647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6320147-6320197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6305840-6306044:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6305223-6305370:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6302804-6302888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6299332-6299630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6295095-6295224:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6257727-6257937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6256318-6256497:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6253426-6253579:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6245094-6246210:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6206877-6207004:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6197865-6197993:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6195618-6195800:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6190528-6190647:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6187698-6187910:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6179914-6180097:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6163114-6163321:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6160028-6160137:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6159487-6159701:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6159112-6159227:-1:exon

LOC125486827
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486827
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 6366525..6366624
location: region:6366525-6366624:1
so has part: feature:6366525-6366624:1:exon

125486827
type: Gene
SIO_000068: ncbigene

position:6366525:1
position: 6366525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6366624:1
position: 6366624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6366525-6366624:1:exon

LOC125486827
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125486827
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC125486827
subclass of: SO_0000673
so part of: LOC125486827
location: 6366525..6366624
location: region:6366525-6366624:1
so has part: feature:6366525-6366624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6366525-6366624:1:exon

LOC109913313
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109913313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6777566..6864081
location: region:6777566-6864081:1
so has part: feature:6777566-6864081:1:exon
subclass of: SO_0000010

109913313
type: Gene
SIO_000068: ncbigene

position:6777566:1
position: 6777566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6864081:1
position: 6864081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6777566-6864081:1:exon

LOC109913313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109913313
product: lamin-L(III)-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048615717.1
SIO_010081: LOC109913313
subclass of: SO_0000673
so part of: LOC109913313
location: join(6777566..6777622,6827220..6827390,6835255..6835380,6840237..6840457,6844206..6844419,6845031..6845138,6848447..6848566,6849856..6849969,6862778..6864081)
location: region:6777566-6864081:1
so has part: feature:6777566-6777622:1:exon
so has part: feature:6827220-6827390:1:exon
so has part: feature:6835255-6835380:1:exon
so has part: feature:6840237-6840457:1:exon
so has part: feature:6844206-6844419:1:exon
so has part: feature:6845031-6845138:1:exon
so has part: feature:6848447-6848566:1:exon
so has part: feature:6849856-6849969:1:exon
so has part: feature:6862778-6864081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6777566-6777622:1:exon

position:6777622:1
position: 6777622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6827220-6827390:1:exon

position:6827220:1
position: 6827220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6827390:1
position: 6827390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6835255-6835380:1:exon

position:6835255:1
position: 6835255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6835380:1
position: 6835380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6840237-6840457:1:exon

position:6840237:1
position: 6840237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6840457:1
position: 6840457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6844206-6844419:1:exon

position:6844206:1
position: 6844206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6844419:1
position: 6844419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6845031-6845138:1:exon

position:6845031:1
position: 6845031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6845138:1
position: 6845138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6848447-6848566:1:exon

position:6848447:1
position: 6848447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6848566:1
position: 6848566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6849856-6849969:1:exon

position:6849856:1
position: 6849856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6849969:1
position: 6849969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6862778-6864081:1:exon

position:6862778:1
position: 6862778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109913313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109913313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin-L(III)-like
translation: MTEVLNEYVASDFTKEQDAEITETKRQHETRLREIETGSQQEYESKLAEVLQQLRADQYQQIKQYKEQLEENFHAKLESAQLAAAKSREFANAAKEELAAAKMRTDDLTSQLHQYCSQISTLKAKVQDLETTVDHEKAVSQQRLVDKDQEVAEIREKMVVQLEEYEELLGVKLALDMEINAYRKMLEGEEQRLDLTPTPASRNVVRTSSSVPTFRGTKRKLSEAEIASCNYETREHMFSIGKIILEEIDNEGKFVKLKNISDEDQPLSGWAIRRQFQDLTQFTYKFPARFTLKPKQAVTIWTAGSDVAQCPSVDLVWRGQKSWGTGDDIRVVLLNANGEEMASRTVVQIPGVLESKSRDEDCEDASQDSRQIEYSPTGHAENEDPSCSIM
SIO_010081: LOC109913313
subclass of: SO_0000673
so part of: LOC109913313
location: join(6777566..6777622,6827220..6827390,6835255..6835380,6840237..6840457,6844206..6844419,6845031..6845138,6848447..6848566,6849856..6849969,6862778..6862819)
location: region:6777566-6862819:1
so has part: feature:6777566-6777622:1:exon
so has part: feature:6827220-6827390:1:exon
so has part: feature:6835255-6835380:1:exon
so has part: feature:6840237-6840457:1:exon
so has part: feature:6844206-6844419:1:exon
so has part: feature:6845031-6845138:1:exon
so has part: feature:6848447-6848566:1:exon
so has part: feature:6849856-6849969:1:exon
so has part: feature:6862778-6862819:1:exon

XP_048471674.1
type: Protein
SIO_000068: ncbiprotein

position:6862819:1
position: 6862819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6777566-6777622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6827220-6827390:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6835255-6835380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6840237-6840457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6844206-6844419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6845031-6845138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6848447-6848566:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6849856-6849969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6862778-6862819:1:exon

zgc:158785
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: zgc:158785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6866315..6894406)
location: region:6866315-6894406:-1
so has part: feature:6866315-6894406:-1:exon
subclass of: SO_0000010

109913310
type: Gene
SIO_000068: ncbigene

position:6866315:-1
position: 6866315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6894406:-1
position: 6894406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6866315-6894406:-1:exon

zgc:158785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zgc:158785
product: uncharacterized protein LOC791214 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616026.1
SIO_010081: zgc:158785
subclass of: SO_0000673
so part of: zgc:158785
location: complement(join(6866315..6867691,6867939..6868148,6873031..6873226,6879058..6879332,6888356..6888459,6894348..6894406))
location: region:6866315-6894406:-1
so has part: feature:6894348-6894406:-1:exon
so has part: feature:6888356-6888459:-1:exon
so has part: feature:6879058-6879332:-1:exon
so has part: feature:6873031-6873226:-1:exon
so has part: feature:6867939-6868148:-1:exon
so has part: feature:6866315-6867691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6894348-6894406:-1:exon

position:6894348:-1
position: 6894348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6888356-6888459:-1:exon

position:6888356:-1
position: 6888356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6888459:-1
position: 6888459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6879058-6879332:-1:exon

position:6879058:-1
position: 6879058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6879332:-1
position: 6879332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6873031-6873226:-1:exon

position:6873031:-1
position: 6873031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6873226:-1
position: 6873226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6867939-6868148:-1:exon

position:6867939:-1
position: 6867939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6868148:-1
position: 6868148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6866315-6867691:-1:exon

position:6867691:-1
position: 6867691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zgc:158785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zgc:158785
product: uncharacterized protein LOC791214 homolog, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616027.1
SIO_010081: zgc:158785
subclass of: SO_0000673
so part of: zgc:158785
location: complement(join(6866315..6867691,6867939..6868148,6873031..6873226,6879058..6879332,6888361..6888459,6888588..6888701))
location: region:6866315-6888701:-1
so has part: feature:6888588-6888701:-1:exon
so has part: feature:6888361-6888459:-1:exon
so has part: feature:6879058-6879332:-1:exon
so has part: feature:6873031-6873226:-1:exon
so has part: feature:6867939-6868148:-1:exon
so has part: feature:6866315-6867691:-1:exon

position:6888701:-1
position: 6888701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6888588-6888701:-1:exon

position:6888588:-1
position: 6888588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6888361-6888459:-1:exon

position:6888361:-1
position: 6888361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6879058-6879332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6873031-6873226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6867939-6868148:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6866315-6867691:-1:exon

zgc:158785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zgc:158785
product: uncharacterized protein LOC791214 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020512798.2
SIO_010081: zgc:158785
subclass of: SO_0000673
so part of: zgc:158785
location: complement(join(6866315..6867691,6867939..6868148,6873031..6873226,6879058..6879332,6888356..6888459,6888588..6888701))
location: region:6866315-6888701:-1
so has part: feature:6888588-6888701:-1:exon
so has part: feature:6888356-6888459:-1:exon
so has part: feature:6879058-6879332:-1:exon
so has part: feature:6873031-6873226:-1:exon
so has part: feature:6867939-6868148:-1:exon
so has part: feature:6866315-6867691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6888588-6888701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6888356-6888459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6879058-6879332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6873031-6873226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6867939-6868148:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6866315-6867691:-1:exon

zgc:158785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zgc:158785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF3
translation: MKADNLQATECQLDNVCYNSPNASWSVNLLSENVQKPQYVIEGSGSDGHLPSSVTVTSSISSDIPICRICHEPSDKESLLSPCECAGTLGTVHRSCLEQWLAASCSNHCEVCHFEFALERMPRPLTEWLKDPALQQKRRMLCGDIICFLFITPLASLSGWLCVQGTVDHFYFSSSVEAVGLLILSAVLITIYLLWTTASFRYHIRLLKEWRRTNQNVKLLIPKSQVLFGNKPNLPAQNSSIIVSKETIV
SIO_010081: zgc:158785
subclass of: SO_0000673
so part of: zgc:158785
location: complement(join(6867533..6867691,6867939..6868148,6873031..6873226,6879058..6879242))
location: region:6867533-6879242:-1
so has part: feature:6879058-6879242:-1:exon
so has part: feature:6873031-6873226:-1:exon
so has part: feature:6867939-6868148:-1:exon
so has part: feature:6867533-6867691:-1:exon

XP_020368387.1
type: Protein
SIO_000068: ncbiprotein

position:6867533:-1
position: 6867533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6879242:-1
position: 6879242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6879058-6879242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6873031-6873226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6867939-6868148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6867533-6867691:-1:exon

zgc:158785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zgc:158785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF3
translation: MKADNLQATECQLDNVCYNSPNASWSVNLLSENVQKPQYVIEGSGSDGHLPSSVTVTSSISSDIPICRICHEPSDKESLLSPCECAGTLGTVHRSCLEQWLAASCSNHCEVCHFEFALERMPRPLTEWLKDPALQQKRRMLCGDIICFLFITPLASLSGWLCVQGTVDHFYFSSSVEAVGLLILSAVLITIYLLWTTASFRYHIRLLKEWRRTNQNVKLLIPKSQVLFGNKPNLPAQNSSIIVSKETIV
SIO_010081: zgc:158785
subclass of: SO_0000673
so part of: zgc:158785
location: complement(join(6867533..6867691,6867939..6868148,6873031..6873226,6879058..6879242))
location: region:6867533-6879242:-1
so has part: feature:6879058-6879242:-1:exon
so has part: feature:6873031-6873226:-1:exon
so has part: feature:6867939-6868148:-1:exon
so has part: feature:6867533-6867691:-1:exon

XP_048471983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6879058-6879242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6873031-6873226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6867939-6868148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6867533-6867691:-1:exon

zgc:158785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zgc:158785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF3
translation: MKADNLQATECQLDNVCYNSPNASWSVNLLSENVQKPQYVIEGSGSDGHLPSSVTVTSSISSDIPICRICHEPSDKESLLSPCECAGTLGTVHRSCLEQWLAASCSNHCEVCHFEFALERMPRPLTEWLKDPALQQKRRMLCGDIICFLFITPLASLSGWLCVQGTVDHFYFSSSVEAVGLLILSAVLITIYLLWTTASFRYHIRLLKEWRRTNQNVKLLIPKSQVLFGNKPNLPAQNSSIIVSKETIV
SIO_010081: zgc:158785
subclass of: SO_0000673
so part of: zgc:158785
location: complement(join(6867533..6867691,6867939..6868148,6873031..6873226,6879058..6879242))
location: region:6867533-6879242:-1
so has part: feature:6879058-6879242:-1:exon
so has part: feature:6873031-6873226:-1:exon
so has part: feature:6867939-6868148:-1:exon
so has part: feature:6867533-6867691:-1:exon

XP_048471984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6879058-6879242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6873031-6873226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6867939-6868148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6867533-6867691:-1:exon

sh3gl3a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: sh3gl3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6913914..6993694)
location: region:6913914-6993694:-1
so has part: feature:6913914-6993694:-1:exon
subclass of: SO_0000010

109913312
type: Gene
SIO_000068: ncbigene

position:6913914:-1
position: 6913914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6993694:-1
position: 6993694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6913914-6993694:-1:exon

sh3gl3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sh3gl3a
product: SH3-domain GRB2-like 3a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 179 long SRA reads, 28 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048615822.1
SIO_010081: sh3gl3a
subclass of: SO_0000673
so part of: sh3gl3a
location: complement(join(6913914..6914620,6915805..6915932,6918441..6918544,6922705..6922863,6925089..6925222,6925632..6925775,6928495..6928567,6936133..6936201,6993659..6993694))
location: region:6913914-6993694:-1
so has part: feature:6993659-6993694:-1:exon
so has part: feature:6936133-6936201:-1:exon
so has part: feature:6928495-6928567:-1:exon
so has part: feature:6925632-6925775:-1:exon
so has part: feature:6925089-6925222:-1:exon
so has part: feature:6922705-6922863:-1:exon
so has part: feature:6918441-6918544:-1:exon
so has part: feature:6915805-6915932:-1:exon
so has part: feature:6913914-6914620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6993659-6993694:-1:exon

position:6993659:-1
position: 6993659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6936133-6936201:-1:exon

position:6936133:-1
position: 6936133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6936201:-1
position: 6936201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6928495-6928567:-1:exon

position:6928495:-1
position: 6928495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6928567:-1
position: 6928567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6925632-6925775:-1:exon

position:6925632:-1
position: 6925632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6925775:-1
position: 6925775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6925089-6925222:-1:exon

position:6925089:-1
position: 6925089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6925222:-1
position: 6925222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6922705-6922863:-1:exon

position:6922705:-1
position: 6922705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6922863:-1
position: 6922863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6918441-6918544:-1:exon

position:6918441:-1
position: 6918441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6918544:-1
position: 6918544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6915805-6915932:-1:exon

position:6915805:-1
position: 6915805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6915932:-1
position: 6915932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6913914-6914620:-1:exon

position:6914620:-1
position: 6914620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sh3gl3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sh3gl3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endophilin-A3a
translation: MGGAEGTKLDEDFVEMERKIEATSKAVAEVLSKTTEYLQPNPAYRAKLGMLNTMSKIRGQVKTTGYPQPEGLLGECMLRNGKDLGDDSNFGPALVDVGEALKQMAEVKDSLDIDVKQNFIDPLQILQEKDLKEIGHHLKKLEGRRLDYDYKKKRHGKIPDEEIRQAIDKFEESKELAEISMFNFLENDVEQISQLLALVEAALNYHKESTTILEELHNTLQHRINTASSRPKREFKPKPVVAPSFEPIDNQQQNGLSYASSFKSSASCTQVDQPCCKALYDFDPENEGELGFKEGDIITLTNQIDENWFEGMLDGESGFFPINYVQVIVPLPQ
SIO_010081: sh3gl3a
subclass of: SO_0000673
so part of: sh3gl3a
location: complement(join(6914415..6914620,6915805..6915932,6918441..6918544,6922705..6922863,6925089..6925222,6925632..6925775,6928495..6928567,6936133..6936186))
location: region:6914415-6936186:-1
so has part: feature:6936133-6936186:-1:exon
so has part: feature:6928495-6928567:-1:exon
so has part: feature:6925632-6925775:-1:exon
so has part: feature:6925089-6925222:-1:exon
so has part: feature:6922705-6922863:-1:exon
so has part: feature:6918441-6918544:-1:exon
so has part: feature:6915805-6915932:-1:exon
so has part: feature:6914415-6914620:-1:exon

XP_048471779.1
type: Protein
SIO_000068: ncbiprotein

position:6914415:-1
position: 6914415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6936186:-1
position: 6936186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6936133-6936186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6928495-6928567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6925632-6925775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6925089-6925222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6922705-6922863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6918441-6918544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6915805-6915932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6914415-6914620:-1:exon

LOC125486772
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6956285..7012272)
location: region:6956285-7012272:-1
so has part: feature:6956285-7012272:-1:exon
subclass of: SO_0000010

125486772
type: Gene
SIO_000068: ncbigene

position:6956285:-1
position: 6956285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7012272:-1
position: 7012272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6956285-7012272:-1:exon

LOC125486772
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125486772
product: prelamin-A/C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048615718.1
SIO_010081: LOC125486772
subclass of: SO_0000673
so part of: LOC125486772
location: complement(join(6956285..6956504,6988455..6988516,7002245..7002370,7002455..7002611,7011215..7012272))
location: region:6956285-7012272:-1
so has part: feature:7011215-7012272:-1:exon
so has part: feature:7002455-7002611:-1:exon
so has part: feature:7002245-7002370:-1:exon
so has part: feature:6988455-6988516:-1:exon
so has part: feature:6956285-6956504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7011215-7012272:-1:exon

position:7011215:-1
position: 7011215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7002455-7002611:-1:exon

position:7002455:-1
position: 7002455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7002611:-1
position: 7002611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7002245-7002370:-1:exon

position:7002245:-1
position: 7002245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7002370:-1
position: 7002370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6988455-6988516:-1:exon

position:6988455:-1
position: 6988455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6988516:-1
position: 6988516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6956285-6956504:-1:exon

position:6956504:-1
position: 6956504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125486772
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125486772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prelamin-A/C-like
translation: MALRASSQQQQRPGSAKGSSPLVKPSPLRLSRLQEKEELRQLNDRLAAYIERIRCLEGENQALLARLSEQQEAHSSGYRTSRSLYQAELSGARQLLDRTANDKARLQLQLTRLSEEHRRLQERNAKKESELKFALARVSDLETSLNSKEAQLATTLSEKKTLESELTEVKAQLANINSVASDAKAQLQDEMLQRCDLANRAQTLQEELDFQKSLYEKVVAGFQEHEEIIRQGYRTLCRVEKTKLYLLEDKVRVIKGVPAAMSVLELKSFLGLVNYYRKLICNLESHPGIPTFAVEKGSALKMVSEPRCGL
SIO_010081: LOC125486772
subclass of: SO_0000673
so part of: LOC125486772
location: complement(join(6956285..6956504,6988455..6988516,7002245..7002370,7002455..7002611,7011215..7011582))
location: region:6956285-7011582:-1
so has part: feature:7011215-7011582:-1:exon
so has part: feature:7002455-7002611:-1:exon
so has part: feature:7002245-7002370:-1:exon
so has part: feature:6988455-6988516:-1:exon
so has part: feature:6956285-6956504:-1:exon

XP_048471675.1
type: Protein
SIO_000068: ncbiprotein

position:7011582:-1
position: 7011582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7011215-7011582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7002455-7002611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7002245-7002370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6988455-6988516:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6956285-6956504:-1:exon

bnc1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: bnc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7427838..7535360
location: region:7427838-7535360:1
so has part: feature:7427838-7535360:1:exon
subclass of: SO_0000010

109928622
type: Gene
SIO_000068: ncbigene

position:7427838:1
position: 7427838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7535360:1
position: 7535360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7427838-7535360:1:exon

bnc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: bnc1
product: basonuclin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020528550.2
SIO_010081: bnc1
subclass of: SO_0000673
so part of: bnc1
location: join(7427838..7428272,7484532..7484634,7491236..7491471,7519657..7521557,7533749..7535360)
location: region:7427838-7535360:1
so has part: feature:7427838-7428272:1:exon
so has part: feature:7484532-7484634:1:exon
so has part: feature:7491236-7491471:1:exon
so has part: feature:7519657-7521557:1:exon
so has part: feature:7533749-7535360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7427838-7428272:1:exon

position:7428272:1
position: 7428272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7484532-7484634:1:exon

position:7484532:1
position: 7484532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7484634:1
position: 7484634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7491236-7491471:1:exon

position:7491236:1
position: 7491236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7491471:1
position: 7491471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7519657-7521557:1:exon

position:7519657:1
position: 7519657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7521557:1
position: 7521557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7533749-7535360:1:exon

position:7533749:1
position: 7533749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bnc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: bnc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein basonuclin-2
translation: MRSFIEPARNGKVDGNGADRSVLTMSDSIRCTLVNCNCECFQAGKINIRQCDHCKHGWVVHALDKLQVNHLYQQSQVEIVQSNVVFDISSLMLYGTQAIPIRLKILLDRLFSVLKQEEVLQILHSLGWTLQDYIRGYILQDASGKVLDRWSIMTYEEEMVSLNQFLRFGETKSIVELMAIQEKEGHAVVVPPTKNNSDIRAFIESSNQTRNPVLAAQPEKLNASSAYHFENIVNNLAFMLPFQFFNPIPMPLLGASPKSFLLDQPQDRPRETKQEIPVPVNKGFLVNAQADSFPSPEESSQNSQDGVHLDAKNNSTSEYSGVISPALSVTPKHDIEQLYVPSHIRGKCVEKAGSLTNKGRVYCSACEKTFYDKGTLKIHYNAVHLKIKHKCTVEGCNMVFSSLRSRNRHSSNPNPRLHMPTMKNNRDKDLRNCSLTTVIQVNNRKLDITHCPGTDARSLPAFDNPRADPANNIQTGTCNAGHSTMFQNLKTVQPVLPFYRSLVPPSELAIPQDALPHLPVPAPSIPEQPPVPKKKSRKSSMPVKIEKESMEGLEEPEGGPLDSSGAAAQRRGDTRFQRLKDGLQRTESGLSYLSDTEEQSPKGQHRELVPASNKADTGEKSANSPLHLENGDAYMQAKTVIISSPGEERREFEPDSGEGLVFKSEGWLQPTNNSKEVQHGLLNGGFSSALLHRRPGSPCSESPAVNGCTYLHLVADKGDNQGTSNPNYCYVCKKVFKSSYSVKLHYKNVHLKEMHLCTVGGCNAAFPSRRSRDRHSANINLHHKLLTKGSCESQNINNSTPLTKEPCKDILVRTHMGQTPVILKAKSKNEHSVVSLSNAQEQTSDAQGGDALYDGAVLDLSTTSSVKSGSSIHSWDSDAGSDEGVPVNDEDVFEHSDLMAKDKLYQLATVVEKPIDHLMQTPSANSPIMCNICQKIYSNKGTFRAHYKTVHLRQLHKCKVPGCSTMFSSVRSRNRHSQNPNLHKDTFCSSKESH
SIO_010081: bnc1
subclass of: SO_0000673
so part of: bnc1
location: join(7428192..7428272,7484532..7484634,7491236..7491471,7519657..7521557,7533749..7534412)
location: region:7428192-7534412:1
so has part: feature:7428192-7428272:1:exon
so has part: feature:7484532-7484634:1:exon
so has part: feature:7491236-7491471:1:exon
so has part: feature:7519657-7521557:1:exon
so has part: feature:7533749-7534412:1:exon

XP_020384139.2
type: Protein
SIO_000068: ncbiprotein

position:7428192:1
position: 7428192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7534412:1
position: 7534412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7428192-7428272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7484532-7484634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7491236-7491471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7519657-7521557:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7533749-7534412:1:exon

hdgfl3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7636104..7736956
location: region:7636104-7736956:1
so has part: feature:7636104-7736956:1:exon
subclass of: SO_0000010

109928623
type: Gene
SIO_000068: ncbigene

position:7636104:1
position: 7636104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7736956:1
position: 7736956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7636104-7736956:1:exon

hdgfl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hdgfl3
product: HDGF like 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048616038.1
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7636104..7636886,7695193..7695269,7699110..7699248,7711212..7711304,7718318..7718476,7730575..7730730,7731291..7731390,7736455..7736560)
location: region:7636104-7736560:1
so has part: feature:7636104-7636886:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7711212-7711304:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731390:1:exon
so has part: feature:7736455-7736560:1:exon

position:7736560:1
position: 7736560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7636104-7636886:1:exon

position:7636886:1
position: 7636886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

position:7695193:1
position: 7695193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7695269:1
position: 7695269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

position:7699110:1
position: 7699110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7699248:1
position: 7699248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7711212-7711304:1:exon

position:7711212:1
position: 7711212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7711304:1
position: 7711304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7718318-7718476:1:exon

position:7718318:1
position: 7718318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7718476:1
position: 7718476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7730575-7730730:1:exon

position:7730575:1
position: 7730575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7730730:1
position: 7730730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7731291-7731390:1:exon

position:7731291:1
position: 7731291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7731390:1
position: 7731390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7736455-7736560:1:exon

position:7736455:1
position: 7736455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hdgfl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hdgfl3
product: HDGF like 3, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616041.1
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7636381..7636886,7695193..7695269,7699110..7699248,7711212..7711304,7718318..7718476,7730575..7730730,7736455..7736956)
location: region:7636381-7736956:1
so has part: feature:7636381-7636886:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7711212-7711304:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7736455-7736956:1:exon

position:7636381:1
position: 7636381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7636381-7636886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7711212-7711304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7736455-7736956:1:exon

hdgfl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hdgfl3
product: HDGF like 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_048616042.1
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7636381..7636886,7695193..7695269,7699110..7699248,7718318..7718476,7730575..7730730,7731291..7731390,7736455..7736560)
location: region:7636381-7736560:1
so has part: feature:7636381-7636886:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731390:1:exon
so has part: feature:7736455-7736560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7636381-7636886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7731291-7731390:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7736455-7736560:1:exon

hdgfl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hdgfl3
product: HDGF like 3, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020528551.2
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7636384..7636886,7695193..7695269,7699110..7699248,7718318..7718476,7730575..7730730,7736455..7736956)
location: region:7636384-7736956:1
so has part: feature:7636384-7636886:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7736455-7736956:1:exon

position:7636384:1
position: 7636384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7636384-7636886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7736455-7736956:1:exon

hdgfl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor-related protein 3 isoform X5
translation: MARPRPRDYKAGDLVFAKMKGYPQWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQDKNMLIVGKSTLTDALPWRKQRGTIGFPSSWAIQQQSSSETEGEGGNTADASSEGEGGEIIDEEGKTKSRNEKGGSKRKKATFKKSAKQLRKSSDQEGKDEGDKDIKEEESKSGSEAGEADGDTKNVAEHQKMNEETLII
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7636803..7636886,7695193..7695269,7699110..7699248,7711212..7711304,7718318..7718476,7730575..7730730,7736455..7736469)
location: region:7636803-7736469:1
so has part: feature:7636803-7636886:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7711212-7711304:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7736455-7736469:1:exon

XP_048471998.1
type: Protein
SIO_000068: ncbiprotein

position:7636803:1
position: 7636803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7736469:1
position: 7736469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7636803-7636886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7711212-7711304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7736455-7736469:1:exon

hdgfl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor-related protein 3 isoform X8
translation: MARPRPRDYKAGDLVFAKMKGYPQWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQAIQQQSSSETEGEGGNTADASSEGEGGEIIDEEGKTKSRNEKGGSKRKKATFKKSAKQLRKSSDQEGKDEGDKDIKEEESKSGSEAGEADGDTKNVAEHQKMNEETLII
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7636803..7636886,7695193..7695269,7699110..7699248,7718318..7718476,7730575..7730730,7736455..7736469)
location: region:7636803-7736469:1
so has part: feature:7636803-7636886:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7736455-7736469:1:exon

XP_020384140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7636803-7636886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7736455-7736469:1:exon

hdgfl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor-related protein 3 isoform X2
translation: MARPRPRDYKAGDLVFAKMKGYPQWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQDKNMLIVGKSTLTDALPWRKQRGTIGFPSSWAIQQQSSSETEGEGGNTADASSEGEGGEIIDEEGKTKSRNEKGGSKRKKATFKKSAKQLRKSSDQEGKDEGDKDIKEEESKSGSEAGEADGDTKNVAEHQKMNEEDFPRNRPELADLRMQLMLVSDWAASGKLDCQS
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7636803..7636886,7695193..7695269,7699110..7699248,7711212..7711304,7718318..7718476,7730575..7730730,7731291..7731389)
location: region:7636803-7731389:1
so has part: feature:7636803-7636886:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7711212-7711304:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731389:1:exon

XP_048471995.1
type: Protein
SIO_000068: ncbiprotein

position:7731389:1
position: 7731389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7636803-7636886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7711212-7711304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7731291-7731389:1:exon

hdgfl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor-related protein 3 isoform X6
translation: MARPRPRDYKAGDLVFAKMKGYPQWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQAIQQQSSSETEGEGGNTADASSEGEGGEIIDEEGKTKSRNEKGGSKRKKATFKKSAKQLRKSSDQEGKDEGDKDIKEEESKSGSEAGEADGDTKNVAEHQKMNEEDFPRNRPELADLRMQLMLVSDWAASGKLDCQS
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7636803..7636886,7695193..7695269,7699110..7699248,7718318..7718476,7730575..7730730,7731291..7731389)
location: region:7636803-7731389:1
so has part: feature:7636803-7636886:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731389:1:exon

XP_048471999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7636803-7636886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7731291-7731389:1:exon

hdgfl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hdgfl3
product: HDGF like 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616039.1
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656325..7656455,7695193..7695269,7699110..7699248,7711212..7711304,7718318..7718476,7730575..7730730,7736455..7736956)
location: region:7656325-7736956:1
so has part: feature:7656325-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7711212-7711304:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7736455-7736956:1:exon

position:7656325:1
position: 7656325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7656325-7656455:1:exon

position:7656455:1
position: 7656455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7711212-7711304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7736455-7736956:1:exon

hdgfl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hdgfl3
product: HDGF like 3, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616043.1
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656325..7656455,7695193..7695269,7699110..7699248,7718318..7718476,7730575..7730730,7736455..7736956)
location: region:7656325-7736956:1
so has part: feature:7656325-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7736455-7736956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7656325-7656455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7736455-7736956:1:exon

hdgfl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hdgfl3
product: HDGF like 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048616037.1
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656325..7656455,7695193..7695269,7699110..7699248,7711212..7711304,7718318..7718476,7730575..7730730,7731291..7731390,7736455..7736560)
location: region:7656325-7736560:1
so has part: feature:7656325-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7711212-7711304:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731390:1:exon
so has part: feature:7736455-7736560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7656325-7656455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7711212-7711304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7731291-7731390:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7736455-7736560:1:exon

hdgfl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hdgfl3
product: HDGF like 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048616040.1
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656325..7656455,7695193..7695269,7699110..7699248,7718318..7718476,7730575..7730730,7731291..7731390,7736455..7736560)
location: region:7656325-7736560:1
so has part: feature:7656325-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731390:1:exon
so has part: feature:7736455-7736560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7656325-7656455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7731291-7731390:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7736455-7736560:1:exon

hdgfl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hdgfl3
product: HDGF like 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048616044.1
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656325..7656455,7695193..7695269,7699110..7699248,7730575..7730730,7731291..7731390,7736455..7736560)
location: region:7656325-7736560:1
so has part: feature:7656325-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731390:1:exon
so has part: feature:7736455-7736560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7656325-7656455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7731291-7731390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7736455-7736560:1:exon

hdgfl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor-related protein 3 isoform X3
translation: MSAEHQTSSASQLTSTPTTRATDLLKPLDTMLDNILIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQDKNMLIVGKSTLTDALPWRKQRGTIGFPSSWAIQQQSSSETEGEGGNTADASSEGEGGEIIDEEGKTKSRNEKGGSKRKKATFKKSAKQLRKSSDQEGKDEGDKDIKEEESKSGSEAGEADGDTKNVAEHQKMNEETLII
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656348..7656455,7695193..7695269,7699110..7699248,7711212..7711304,7718318..7718476,7730575..7730730,7736455..7736469)
location: region:7656348-7736469:1
so has part: feature:7656348-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7711212-7711304:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7736455-7736469:1:exon

XP_048471996.1
type: Protein
SIO_000068: ncbiprotein

position:7656348:1
position: 7656348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7656348-7656455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7711212-7711304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7736455-7736469:1:exon

hdgfl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor-related protein 3 isoform X7
translation: MSAEHQTSSASQLTSTPTTRATDLLKPLDTMLDNILIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQAIQQQSSSETEGEGGNTADASSEGEGGEIIDEEGKTKSRNEKGGSKRKKATFKKSAKQLRKSSDQEGKDEGDKDIKEEESKSGSEAGEADGDTKNVAEHQKMNEETLII
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656348..7656455,7695193..7695269,7699110..7699248,7718318..7718476,7730575..7730730,7736455..7736469)
location: region:7656348-7736469:1
so has part: feature:7656348-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7736455-7736469:1:exon

XP_048472000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7656348-7656455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7736455-7736469:1:exon

hdgfl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor-related protein 3 isoform X1
translation: MSAEHQTSSASQLTSTPTTRATDLLKPLDTMLDNILIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQDKNMLIVGKSTLTDALPWRKQRGTIGFPSSWAIQQQSSSETEGEGGNTADASSEGEGGEIIDEEGKTKSRNEKGGSKRKKATFKKSAKQLRKSSDQEGKDEGDKDIKEEESKSGSEAGEADGDTKNVAEHQKMNEEDFPRNRPELADLRMQLMLVSDWAASGKLDCQS
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656348..7656455,7695193..7695269,7699110..7699248,7711212..7711304,7718318..7718476,7730575..7730730,7731291..7731389)
location: region:7656348-7731389:1
so has part: feature:7656348-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7711212-7711304:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731389:1:exon

XP_048471994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7656348-7656455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7711212-7711304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7731291-7731389:1:exon

hdgfl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor-related protein 3 isoform X4
translation: MSAEHQTSSASQLTSTPTTRATDLLKPLDTMLDNILIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQAIQQQSSSETEGEGGNTADASSEGEGGEIIDEEGKTKSRNEKGGSKRKKATFKKSAKQLRKSSDQEGKDEGDKDIKEEESKSGSEAGEADGDTKNVAEHQKMNEEDFPRNRPELADLRMQLMLVSDWAASGKLDCQS
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656348..7656455,7695193..7695269,7699110..7699248,7718318..7718476,7730575..7730730,7731291..7731389)
location: region:7656348-7731389:1
so has part: feature:7656348-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7718318-7718476:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731389:1:exon

XP_048471997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7656348-7656455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7718318-7718476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7731291-7731389:1:exon

hdgfl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hdgfl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor-related protein 3 isoform X9
translation: MSAEHQTSSASQLTSTPTTRATDLLKPLDTMLDNILIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQKSAKQLRKSSDQEGKDEGDKDIKEEESKSGSEAGEADGDTKNVAEHQKMNEEDFPRNRPELADLRMQLMLVSDWAASGKLDCQS
SIO_010081: hdgfl3
subclass of: SO_0000673
so part of: hdgfl3
location: join(7656348..7656455,7695193..7695269,7699110..7699248,7730575..7730730,7731291..7731389)
location: region:7656348-7731389:1
so has part: feature:7656348-7656455:1:exon
so has part: feature:7695193-7695269:1:exon
so has part: feature:7699110-7699248:1:exon
so has part: feature:7730575-7730730:1:exon
so has part: feature:7731291-7731389:1:exon

XP_048472001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7656348-7656455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695193-7695269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7699110-7699248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7730575-7730730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7731291-7731389:1:exon

LOC109928625
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109928625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7743007..7815321)
location: region:7743007-7815321:-1
so has part: feature:7743007-7815321:-1:exon
subclass of: SO_0000010

109928625
type: Gene
SIO_000068: ncbigene

position:7743007:-1
position: 7743007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7815321:-1
position: 7815321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7743007-7815321:-1:exon

LOC109928625
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109928625
product: transmembrane 6 superfamily member 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020528552.2
SIO_010081: LOC109928625
subclass of: SO_0000673
so part of: LOC109928625
location: complement(join(7743007..7744588,7761431..7761550,7772350..7772442,7774191..7774295,7789555..7789673,7790058..7790140,7795118..7795221,7805377..7805474,7805599..7805702,7814729..7815321))
location: region:7743007-7815321:-1
so has part: feature:7814729-7815321:-1:exon
so has part: feature:7805599-7805702:-1:exon
so has part: feature:7805377-7805474:-1:exon
so has part: feature:7795118-7795221:-1:exon
so has part: feature:7790058-7790140:-1:exon
so has part: feature:7789555-7789673:-1:exon
so has part: feature:7774191-7774295:-1:exon
so has part: feature:7772350-7772442:-1:exon
so has part: feature:7761431-7761550:-1:exon
so has part: feature:7743007-7744588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7814729-7815321:-1:exon

position:7814729:-1
position: 7814729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7805599-7805702:-1:exon

position:7805599:-1
position: 7805599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7805702:-1
position: 7805702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7805377-7805474:-1:exon

position:7805377:-1
position: 7805377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7805474:-1
position: 7805474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7795118-7795221:-1:exon

position:7795118:-1
position: 7795118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7795221:-1
position: 7795221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7790058-7790140:-1:exon

position:7790058:-1
position: 7790058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7790140:-1
position: 7790140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7789555-7789673:-1:exon

position:7789555:-1
position: 7789555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7789673:-1
position: 7789673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7774191-7774295:-1:exon

position:7774191:-1
position: 7774191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7774295:-1
position: 7774295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7772350-7772442:-1:exon

position:7772350:-1
position: 7772350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7772442:-1
position: 7772442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7761431-7761550:-1:exon

position:7761431:-1
position: 7761431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7761550:-1
position: 7761550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7743007-7744588:-1:exon

position:7744588:-1
position: 7744588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109928625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109928625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 6 superfamily member 1 isoform X1
translation: MTASSATRVFVLSLVSIPVSYLFNFLSTNCSPWTILIVGLLILISVAIIAYFLARKKPPKDPLFYLYAVFAFTSVVDLIVGLEQDGLIDGFMTLYLKEGEPYLSTGHGHMICYWDGSAHYLMYLLMVAAIAWEQSYRTIGLYWVGSILMSTFVFLSGSLVGKYGSKLGPVSLLIIPYLILPMWAVLQIYNQPLENESAPKAIEIVQKKNLLQRPLDLLLTISLLLVIGFSLFRGLVALDCPIKVCRQYLQLQEPYLRDPAAYPKIQMLVYMFYSVPFCIITLYGLFVPGCSWLPDLALLHAGGLAQAQFSHIGASLHSRTPYTYRVPEEAQLVFLITNGLYGIVPQLLAYRCVNNPEFFLKRKEDPKTK
SIO_010081: LOC109928625
subclass of: SO_0000673
so part of: LOC109928625
location: complement(join(7744397..7744588,7761431..7761550,7772350..7772442,7774191..7774295,7789555..7789673,7790058..7790140,7795118..7795221,7805377..7805474,7805599..7805702,7814729..7814820))
location: region:7744397-7814820:-1
so has part: feature:7814729-7814820:-1:exon
so has part: feature:7805599-7805702:-1:exon
so has part: feature:7805377-7805474:-1:exon
so has part: feature:7795118-7795221:-1:exon
so has part: feature:7790058-7790140:-1:exon
so has part: feature:7789555-7789673:-1:exon
so has part: feature:7774191-7774295:-1:exon
so has part: feature:7772350-7772442:-1:exon
so has part: feature:7761431-7761550:-1:exon
so has part: feature:7744397-7744588:-1:exon

XP_020384141.1
type: Protein
SIO_000068: ncbiprotein

position:7744397:-1
position: 7744397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7814820:-1
position: 7814820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7814729-7814820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7805599-7805702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7805377-7805474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7795118-7795221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7790058-7790140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7789555-7789673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7774191-7774295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7772350-7772442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7761431-7761550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7744397-7744588:-1:exon

LOC109928625
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109928625
product: transmembrane 6 superfamily member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048616128.1
SIO_010081: LOC109928625
subclass of: SO_0000673
so part of: LOC109928625
location: complement(join(7745609..7745850,7761431..7761550,7772350..7772442,7774191..7774295,7789555..7789673,7790058..7790140,7795118..7795221,7805377..7805474,7805599..7805702,7814729..7815321))
location: region:7745609-7815321:-1
so has part: feature:7814729-7815321:-1:exon
so has part: feature:7805599-7805702:-1:exon
so has part: feature:7805377-7805474:-1:exon
so has part: feature:7795118-7795221:-1:exon
so has part: feature:7790058-7790140:-1:exon
so has part: feature:7789555-7789673:-1:exon
so has part: feature:7774191-7774295:-1:exon
so has part: feature:7772350-7772442:-1:exon
so has part: feature:7761431-7761550:-1:exon
so has part: feature:7745609-7745850:-1:exon

position:7745609:-1
position: 7745609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7814729-7815321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7805599-7805702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7805377-7805474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7795118-7795221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7790058-7790140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7789555-7789673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7774191-7774295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7772350-7772442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7761431-7761550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7745609-7745850:-1:exon

position:7745850:-1
position: 7745850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109928625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109928625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 6 superfamily member 1 isoform X2
translation: MTASSATRVFVLSLVSIPVSYLFNFLSTNCSPWTILIVGLLILISVAIIAYFLARKKPPKDPLFYLYAVFAFTSVVDLIVGLEQDGLIDGFMTLYLKEGEPYLSTGHGHMICYWDGSAHYLMYLLMVAAIAWEQSYRTIGLYWVGSILMSTFVFLSGSLVGKYGSKLGPVSLLIIPYLILPMWAVLQIYNQPLENESAPKAIEIVQKKNLLQRPLDLLLTISLLLVIGFSLFRGLVALDCPIKVCRQYLQLQEPYLRDPAAYPKIQMLVYMFYSVPFCIITLYGLFVPGCSWLPDLALLHAGGLAQNYGGRTFLEFEVKICPTLSLL
SIO_010081: LOC109928625
subclass of: SO_0000673
so part of: LOC109928625
location: complement(join(7745785..7745850,7761431..7761550,7772350..7772442,7774191..7774295,7789555..7789673,7790058..7790140,7795118..7795221,7805377..7805474,7805599..7805702,7814729..7814820))
location: region:7745785-7814820:-1
so has part: feature:7814729-7814820:-1:exon
so has part: feature:7805599-7805702:-1:exon
so has part: feature:7805377-7805474:-1:exon
so has part: feature:7795118-7795221:-1:exon
so has part: feature:7790058-7790140:-1:exon
so has part: feature:7789555-7789673:-1:exon
so has part: feature:7774191-7774295:-1:exon
so has part: feature:7772350-7772442:-1:exon
so has part: feature:7761431-7761550:-1:exon
so has part: feature:7745785-7745850:-1:exon

XP_048472085.1
type: Protein
SIO_000068: ncbiprotein

position:7745785:-1
position: 7745785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7814729-7814820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7805599-7805702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7805377-7805474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7795118-7795221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7790058-7790140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7789555-7789673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7774191-7774295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7772350-7772442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7761431-7761550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7745785-7745850:-1:exon

idh2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: idh2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7897851..7922491
location: region:7897851-7922491:1
so has part: feature:7897851-7922491:1:exon
subclass of: SO_0000010

109928626
type: Gene
SIO_000068: ncbigene

position:7897851:1
position: 7897851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7922491:1
position: 7922491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7897851-7922491:1:exon

idh2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: idh2
product: isocitrate dehydrogenase (NADP(+)) 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020528553.2
SIO_010081: idh2
subclass of: SO_0000673
so part of: idh2
location: join(7897851..7898084,7902633..7902724,7905831..7905996,7913475..7913635,7915000..7915143,7916653..7916789,7917185..7917336,7918056..7918168,7920313..7920410,7920879..7920971,7922117..7922491)
location: region:7897851-7922491:1
so has part: feature:7897851-7898084:1:exon
so has part: feature:7902633-7902724:1:exon
so has part: feature:7905831-7905996:1:exon
so has part: feature:7913475-7913635:1:exon
so has part: feature:7915000-7915143:1:exon
so has part: feature:7916653-7916789:1:exon
so has part: feature:7917185-7917336:1:exon
so has part: feature:7918056-7918168:1:exon
so has part: feature:7920313-7920410:1:exon
so has part: feature:7920879-7920971:1:exon
so has part: feature:7922117-7922491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7897851-7898084:1:exon

position:7898084:1
position: 7898084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7902633-7902724:1:exon

position:7902633:1
position: 7902633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7902724:1
position: 7902724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7905831-7905996:1:exon

position:7905831:1
position: 7905831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7905996:1
position: 7905996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7913475-7913635:1:exon

position:7913475:1
position: 7913475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7913635:1
position: 7913635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7915000-7915143:1:exon

position:7915000:1
position: 7915000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7915143:1
position: 7915143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7916653-7916789:1:exon

position:7916653:1
position: 7916653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7916789:1
position: 7916789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7917185-7917336:1:exon

position:7917185:1
position: 7917185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7917336:1
position: 7917336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7918056-7918168:1:exon

position:7918056:1
position: 7918056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7918168:1
position: 7918168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7920313-7920410:1:exon

position:7920313:1
position: 7920313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7920410:1
position: 7920410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7920879-7920971:1:exon

position:7920879:1
position: 7920879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7920971:1
position: 7920971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7922117-7922491:1:exon

position:7922117:1
position: 7922117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

idh2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: idh2
product: isocitrate dehydrogenase (NADP(+)) 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616035.1
SIO_010081: idh2
subclass of: SO_0000673
so part of: idh2
location: join(7897944..7897962,7902633..7902724,7905831..7905996,7913475..7913635,7915000..7915143,7916653..7916789,7917185..7917336,7918056..7918168,7920313..7920410,7920879..7920971,7922117..7922491)
location: region:7897944-7922491:1
so has part: feature:7897944-7897962:1:exon
so has part: feature:7902633-7902724:1:exon
so has part: feature:7905831-7905996:1:exon
so has part: feature:7913475-7913635:1:exon
so has part: feature:7915000-7915143:1:exon
so has part: feature:7916653-7916789:1:exon
so has part: feature:7917185-7917336:1:exon
so has part: feature:7918056-7918168:1:exon
so has part: feature:7920313-7920410:1:exon
so has part: feature:7920879-7920971:1:exon
so has part: feature:7922117-7922491:1:exon

position:7897944:1
position: 7897944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7897944-7897962:1:exon

position:7897962:1
position: 7897962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7902633-7902724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7905831-7905996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7913475-7913635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7915000-7915143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7916653-7916789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7917185-7917336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7918056-7918168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7920313-7920410:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7920879-7920971:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7922117-7922491:1:exon

idh2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: idh2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isocitrate dehydrogenase [NADP], mitochondrial isoform X1
translation: MAAVVGYLRVWSRVRLGAARNPAALAPALGQASAQRRHYADKRIKVANPVVEMDGDEMTRIIWAFIKEKLILSNVDVEMKYYDLGLPHRDATDDQVTIDSALATQKYHVAVKCATITPDEDRVVEFKLKKMWKSPNGTIRNILGGTVFREPIICNNIPRLVPGWSKPITIGRHAHGDQYKATDFVVDKPGKFKLVFTPKDASAAKEWEVYNFPGGGVGMGMYNTDESINGFAHSCFQYALQKKWPLYMSTKNTILKAYDGRFKDIFEEVFQQKYKGDFEKAGIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGNPTSTNPIASIFAWTRGLEHRGKLDGNQELIRFSQTLEQVCVETVESGIMTKDLAGCIHGLSHVRLNEHYVNTTDFLDAIRNNLDKALGKK
SIO_010081: idh2
subclass of: SO_0000673
so part of: idh2
location: join(7897970..7898084,7902633..7902724,7905831..7905996,7913475..7913635,7915000..7915143,7916653..7916789,7917185..7917336,7918056..7918168,7920313..7920410,7920879..7920971,7922117..7922204)
location: region:7897970-7922204:1
so has part: feature:7897970-7898084:1:exon
so has part: feature:7902633-7902724:1:exon
so has part: feature:7905831-7905996:1:exon
so has part: feature:7913475-7913635:1:exon
so has part: feature:7915000-7915143:1:exon
so has part: feature:7916653-7916789:1:exon
so has part: feature:7917185-7917336:1:exon
so has part: feature:7918056-7918168:1:exon
so has part: feature:7920313-7920410:1:exon
so has part: feature:7920879-7920971:1:exon
so has part: feature:7922117-7922204:1:exon

XP_020384142.1
type: Protein
SIO_000068: ncbiprotein

position:7897970:1
position: 7897970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7922204:1
position: 7922204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7897970-7898084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7902633-7902724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7905831-7905996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7913475-7913635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7915000-7915143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7916653-7916789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7917185-7917336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7918056-7918168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7920313-7920410:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7920879-7920971:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7922117-7922204:1:exon

idh2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: idh2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isocitrate dehydrogenase [NADP], mitochondrial isoform X2
translation: MDGDEMTRIIWAFIKEKLILSNVDVEMKYYDLGLPHRDATDDQVTIDSALATQKYHVAVKCATITPDEDRVVEFKLKKMWKSPNGTIRNILGGTVFREPIICNNIPRLVPGWSKPITIGRHAHGDQYKATDFVVDKPGKFKLVFTPKDASAAKEWEVYNFPGGGVGMGMYNTDESINGFAHSCFQYALQKKWPLYMSTKNTILKAYDGRFKDIFEEVFQQKYKGDFEKAGIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGNPTSTNPIASIFAWTRGLEHRGKLDGNQELIRFSQTLEQVCVETVESGIMTKDLAGCIHGLSHVRLNEHYVNTTDFLDAIRNNLDKALGKK
SIO_010081: idh2
subclass of: SO_0000673
so part of: idh2
location: join(7902674..7902724,7905831..7905996,7913475..7913635,7915000..7915143,7916653..7916789,7917185..7917336,7918056..7918168,7920313..7920410,7920879..7920971,7922117..7922204)
location: region:7902674-7922204:1
so has part: feature:7902674-7902724:1:exon
so has part: feature:7905831-7905996:1:exon
so has part: feature:7913475-7913635:1:exon
so has part: feature:7915000-7915143:1:exon
so has part: feature:7916653-7916789:1:exon
so has part: feature:7917185-7917336:1:exon
so has part: feature:7918056-7918168:1:exon
so has part: feature:7920313-7920410:1:exon
so has part: feature:7920879-7920971:1:exon
so has part: feature:7922117-7922204:1:exon

XP_048471992.1
type: Protein
SIO_000068: ncbiprotein

position:7902674:1
position: 7902674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7902674-7902724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7905831-7905996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7913475-7913635:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7915000-7915143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7916653-7916789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7917185-7917336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7918056-7918168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7920313-7920410:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7920879-7920971:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7922117-7922204:1:exon

sema4ba
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: sema4ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7958336..8438898
location: region:7958336-8438898:1
so has part: feature:7958336-8438898:1:exon
subclass of: SO_0000010

109936770
type: Gene
SIO_000068: ncbigene

position:7958336:1
position: 7958336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8438898:1
position: 8438898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7958336-8438898:1:exon

sema4ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sema4ba
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615825.1
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(7958336..7958422,8206799..8206902,8281362..8281472,8303484..8303588,8340720..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438898)
location: region:7958336-8438898:1
so has part: feature:7958336-7958422:1:exon
so has part: feature:8206799-8206902:1:exon
so has part: feature:8281362-8281472:1:exon
so has part: feature:8303484-8303588:1:exon
so has part: feature:8340720-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7958336-7958422:1:exon

position:7958422:1
position: 7958422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8206799-8206902:1:exon

position:8206799:1
position: 8206799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8206902:1
position: 8206902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8281362-8281472:1:exon

position:8281362:1
position: 8281362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8281472:1
position: 8281472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8303484-8303588:1:exon

position:8303484:1
position: 8303484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8303588:1
position: 8303588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8340720-8341063:1:exon

position:8340720:1
position: 8340720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8341063:1
position: 8341063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8396446-8396606:1:exon

position:8396446:1
position: 8396446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8396606:1
position: 8396606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8399093-8399155:1:exon

position:8399093:1
position: 8399093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8399155:1
position: 8399155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8399234-8399332:1:exon

position:8399234:1
position: 8399234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8399332:1
position: 8399332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8399430-8399541:1:exon

position:8399430:1
position: 8399430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8399541:1
position: 8399541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8401802-8401918:1:exon

position:8401802:1
position: 8401802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8401918:1
position: 8401918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8404690-8404847:1:exon

position:8404690:1
position: 8404690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8404847:1
position: 8404847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8413387-8413568:1:exon

position:8413387:1
position: 8413387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8413568:1
position: 8413568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8414929-8415079:1:exon

position:8414929:1
position: 8414929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8415079:1
position: 8415079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8423198-8423408:1:exon

position:8423198:1
position: 8423198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8423408:1
position: 8423408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8427325-8427440:1:exon

position:8427325:1
position: 8427325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8427440:1
position: 8427440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8429324-8429481:1:exon

position:8429324:1
position: 8429324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8429481:1
position: 8429481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8432835-8432929:1:exon

position:8432835:1
position: 8432835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8432929:1
position: 8432929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8437770-8438898:1:exon

position:8437770:1
position: 8437770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

znf710a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: znf710a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7980394..7995072
location: region:7980394-7995072:1
so has part: feature:7980394-7995072:1:exon
subclass of: SO_0000010

109928627
type: Gene
SIO_000068: ncbigene

position:7980394:1
position: 7980394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7995072:1
position: 7995072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7980394-7995072:1:exon

znf710a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: znf710a
product: zinc finger protein 710a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020528554.2
SIO_010081: znf710a
subclass of: SO_0000673
so part of: znf710a
location: join(7980394..7981838,7986109..7986300,7991410..7991584,7994451..7995072)
location: region:7980394-7995072:1
so has part: feature:7980394-7981838:1:exon
so has part: feature:7986109-7986300:1:exon
so has part: feature:7991410-7991584:1:exon
so has part: feature:7994451-7995072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7980394-7981838:1:exon

position:7981838:1
position: 7981838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7986109-7986300:1:exon

position:7986109:1
position: 7986109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7986300:1
position: 7986300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7991410-7991584:1:exon

position:7991410:1
position: 7991410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7991584:1
position: 7991584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7994451-7995072:1:exon

position:7994451:1
position: 7994451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

znf710a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: znf710a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 710a
translation: MDQLVNTGTQTDPVVILSFAQAATLGLVGQNGPFNFPFRENGIYHIPDASINKSTALEHMTTEQSPRLDVINTSECFEQQEEESLEAENGFITFERQARRRKRQPVKLVHAEKNDENCKEETVEAEYDAENQSNSVLYRHGMKMIDISNFKRKQMHRPLRERTQDVHTVNFSPNYKEILHCNSDLQERVDAEEEKLMNNYFETSKSPTLVQIEEQFPEESVTGENRNFVWQRQVAYETEISVPQQEDRSRRAQIDRLDVNVQIDDSYCIDVGEGQKRWQCRLCEKSYTSKYNLVTHILGHSGIKPHECQHCHKLFKQPSHLQMHLLTHEGIRPHKCEVCDKAFTQTSHLKRHMLLHTDIKPYSCRVCGRGFAYPSELKAHEAKHENGRCHICIECGLDFVSLIQLKRHLVAHQGPTPYECTECNKTFSYRSQLQNHMMKHQNIRPYVCTECGMEFTQPHHLKQHSLTHKGVKEFKCEVCGREFTLQANLKRHMLIHTSVRAYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKEFNRMYNLLGHMHLHSDSKPFKCPYCSSKFTLKGNLSRHMKVKHGVMDIVLDGQESLLDIGHSERIENQQADIEDYEENSFDFTSGQKAADDTSDSTKMSDDESMKDIYFNFEKEAERYGMDLKP
SIO_010081: znf710a
subclass of: SO_0000673
so part of: znf710a
location: join(7980432..7981838,7986109..7986300,7991410..7991584,7994451..7994665)
location: region:7980432-7994665:1
so has part: feature:7980432-7981838:1:exon
so has part: feature:7986109-7986300:1:exon
so has part: feature:7991410-7991584:1:exon
so has part: feature:7994451-7994665:1:exon

XP_020384143.1
type: Protein
SIO_000068: ncbiprotein

position:7980432:1
position: 7980432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7994665:1
position: 7994665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7980432-7981838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7986109-7986300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7991410-7991584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7994451-7994665:1:exon

LOC125486833
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486833
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8009161..8009282
location: region:8009161-8009282:1
so has part: feature:8009161-8009282:1:exon
subclass of: SO_0000623

125486833
type: Gene
SIO_000068: ncbigene

position:8009161:1
position: 8009161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8009282:1
position: 8009282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8009161-8009282:1:exon

LOC125486833
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: snRNA
gene: LOC125486833
product: U6atac minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007265459.1
SIO_010081: LOC125486833
subclass of: SO_0000673
so part of: LOC125486833
location: 8009161..8009282
location: region:8009161-8009282:1
so has part: feature:8009161-8009282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8009161-8009282:1:exon

sema4ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sema4ba
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048615829.1
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8067046..8067143,8206799..8206902,8281362..8281472,8303484..8303588,8340720..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437773..8438898)
location: region:8067046-8438898:1
so has part: feature:8067046-8067143:1:exon
so has part: feature:8206799-8206902:1:exon
so has part: feature:8281362-8281472:1:exon
so has part: feature:8303484-8303588:1:exon
so has part: feature:8340720-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437773-8438898:1:exon

position:8067046:1
position: 8067046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8067046-8067143:1:exon

position:8067143:1
position: 8067143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8206799-8206902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8281362-8281472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8303484-8303588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8340720-8341063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8437773-8438898:1:exon

position:8437773:1
position: 8437773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sema4ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sema4ba
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615824.1
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8067870..8068079,8206799..8206902,8281362..8281472,8303484..8303588,8340720..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438898)
location: region:8067870-8438898:1
so has part: feature:8067870-8068079:1:exon
so has part: feature:8206799-8206902:1:exon
so has part: feature:8281362-8281472:1:exon
so has part: feature:8303484-8303588:1:exon
so has part: feature:8340720-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438898:1:exon

position:8067870:1
position: 8067870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8067870-8068079:1:exon

position:8068079:1
position: 8068079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8206799-8206902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8281362-8281472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8303484-8303588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8340720-8341063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8437770-8438898:1:exon

sema4ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sema4ba
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615827.1
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8233972..8234057,8281362..8281472,8303484..8303588,8340720..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438898)
location: region:8233972-8438898:1
so has part: feature:8233972-8234057:1:exon
so has part: feature:8281362-8281472:1:exon
so has part: feature:8303484-8303588:1:exon
so has part: feature:8340720-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438898:1:exon

position:8233972:1
position: 8233972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8233972-8234057:1:exon

position:8234057:1
position: 8234057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8281362-8281472:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8303484-8303588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8340720-8341063:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8437770-8438898:1:exon

sema4ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sema4ba
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615828.1
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8305421..8305551,8340720..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438898)
location: region:8305421-8438898:1
so has part: feature:8305421-8305551:1:exon
so has part: feature:8340720-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438898:1:exon

position:8305421:1
position: 8305421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8305421-8305551:1:exon

position:8305551:1
position: 8305551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8340720-8341063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8437770-8438898:1:exon

sema4ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sema4ba
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048615826.1
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8305934..8306035,8340720..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438898)
location: region:8305934-8438898:1
so has part: feature:8305934-8306035:1:exon
so has part: feature:8340720-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438898:1:exon

position:8305934:1
position: 8305934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8305934-8306035:1:exon

position:8306035:1
position: 8306035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8340720-8341063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8437770-8438898:1:exon

sema4ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sema4ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba isoform X1
translation: MALGFPSYLLLAASTLCTIGFTQPLSKEDDVVPRIAFEYNNTDRPVKHFHRDGVQNYTKLLLSPEHGVLFIGAKNAIFSLDIFNIAPNEFKNEVVWEVPEQKRNECHFKGKSLSSDCFNYIKILLQVNSTHVYVCGTYAFSPTCAYIHIANFSLAKSPFGNLLTEDGKGRCPFDPTYKSTAIMVDGNLYAGTVSNFQGNEPIISRSLGNKPPLKTENSLNWLQDPAFVGSEFIQDGVSGKTSGSNDGKIYFFFSETGKEFDFFENTIVSRIAQICTGDIGGERVLQKRWTTFLKAQLSCSLPDDGFPFNVIQDMFVLSTRKEDWENTTFYGVFTSQWYKGGGATSAVCAYSMEDVKRAFNGRYMEVNRETQQWYPYNHVVPEPRPGACITNAARAMNINSSFQMPDKVLNFAKDHFLMEEIVKSQPLLMKKHVKYIQITVDRVQTISGYYDVLFLGTENGILHKAIKVNHKVHIIEEITLFAEPQPVQNLILDSKQGMLYASSFSGVVQLPVSNCNIYPSCGECVLARDPYCAWDGNVCRDMRGLQTGLHWKQDVERGRPEQQCQQHDSSSLGPRALRPSPGTTSCETVTVRPNSFRVLTCKVQSNFATRTWTHNGAAVDDSFMVLPDGGIIATAEPLGVYECWAIEEDFWLLVANYCMRLDGSPEATTLHASRKSIQGLNDGPGSQGKGIIINPLSSESRFPQLTNGKTYWTEFVAVSVVFGLTLAVLSLVLLYRNRDKMKSLIKDGECSNIQQKKQRKIEIPHESLPLNGNPVQVVASEHHKGYQSLNDNHICSTPVLENALNDKDSGYPESPNNQMNQKNLYVEISAHCPHPRVRIGSEIKDSVV
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8340946..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438575)
location: region:8340946-8438575:1
so has part: feature:8340946-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438575:1:exon

XP_048471781.1
type: Protein
SIO_000068: ncbiprotein

position:8340946:1
position: 8340946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8438575:1
position: 8438575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8340946-8341063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8437770-8438575:1:exon

sema4ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sema4ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba isoform X1
translation: MALGFPSYLLLAASTLCTIGFTQPLSKEDDVVPRIAFEYNNTDRPVKHFHRDGVQNYTKLLLSPEHGVLFIGAKNAIFSLDIFNIAPNEFKNEVVWEVPEQKRNECHFKGKSLSSDCFNYIKILLQVNSTHVYVCGTYAFSPTCAYIHIANFSLAKSPFGNLLTEDGKGRCPFDPTYKSTAIMVDGNLYAGTVSNFQGNEPIISRSLGNKPPLKTENSLNWLQDPAFVGSEFIQDGVSGKTSGSNDGKIYFFFSETGKEFDFFENTIVSRIAQICTGDIGGERVLQKRWTTFLKAQLSCSLPDDGFPFNVIQDMFVLSTRKEDWENTTFYGVFTSQWYKGGGATSAVCAYSMEDVKRAFNGRYMEVNRETQQWYPYNHVVPEPRPGACITNAARAMNINSSFQMPDKVLNFAKDHFLMEEIVKSQPLLMKKHVKYIQITVDRVQTISGYYDVLFLGTENGILHKAIKVNHKVHIIEEITLFAEPQPVQNLILDSKQGMLYASSFSGVVQLPVSNCNIYPSCGECVLARDPYCAWDGNVCRDMRGLQTGLHWKQDVERGRPEQQCQQHDSSSLGPRALRPSPGTTSCETVTVRPNSFRVLTCKVQSNFATRTWTHNGAAVDDSFMVLPDGGIIATAEPLGVYECWAIEEDFWLLVANYCMRLDGSPEATTLHASRKSIQGLNDGPGSQGKGIIINPLSSESRFPQLTNGKTYWTEFVAVSVVFGLTLAVLSLVLLYRNRDKMKSLIKDGECSNIQQKKQRKIEIPHESLPLNGNPVQVVASEHHKGYQSLNDNHICSTPVLENALNDKDSGYPESPNNQMNQKNLYVEISAHCPHPRVRIGSEIKDSVV
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8340946..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438575)
location: region:8340946-8438575:1
so has part: feature:8340946-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438575:1:exon

XP_048471782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8340946-8341063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8437770-8438575:1:exon

sema4ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sema4ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba isoform X1
translation: MALGFPSYLLLAASTLCTIGFTQPLSKEDDVVPRIAFEYNNTDRPVKHFHRDGVQNYTKLLLSPEHGVLFIGAKNAIFSLDIFNIAPNEFKNEVVWEVPEQKRNECHFKGKSLSSDCFNYIKILLQVNSTHVYVCGTYAFSPTCAYIHIANFSLAKSPFGNLLTEDGKGRCPFDPTYKSTAIMVDGNLYAGTVSNFQGNEPIISRSLGNKPPLKTENSLNWLQDPAFVGSEFIQDGVSGKTSGSNDGKIYFFFSETGKEFDFFENTIVSRIAQICTGDIGGERVLQKRWTTFLKAQLSCSLPDDGFPFNVIQDMFVLSTRKEDWENTTFYGVFTSQWYKGGGATSAVCAYSMEDVKRAFNGRYMEVNRETQQWYPYNHVVPEPRPGACITNAARAMNINSSFQMPDKVLNFAKDHFLMEEIVKSQPLLMKKHVKYIQITVDRVQTISGYYDVLFLGTENGILHKAIKVNHKVHIIEEITLFAEPQPVQNLILDSKQGMLYASSFSGVVQLPVSNCNIYPSCGECVLARDPYCAWDGNVCRDMRGLQTGLHWKQDVERGRPEQQCQQHDSSSLGPRALRPSPGTTSCETVTVRPNSFRVLTCKVQSNFATRTWTHNGAAVDDSFMVLPDGGIIATAEPLGVYECWAIEEDFWLLVANYCMRLDGSPEATTLHASRKSIQGLNDGPGSQGKGIIINPLSSESRFPQLTNGKTYWTEFVAVSVVFGLTLAVLSLVLLYRNRDKMKSLIKDGECSNIQQKKQRKIEIPHESLPLNGNPVQVVASEHHKGYQSLNDNHICSTPVLENALNDKDSGYPESPNNQMNQKNLYVEISAHCPHPRVRIGSEIKDSVV
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8340946..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438575)
location: region:8340946-8438575:1
so has part: feature:8340946-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438575:1:exon

XP_048471783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8340946-8341063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8437770-8438575:1:exon

sema4ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sema4ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba isoform X1
translation: MALGFPSYLLLAASTLCTIGFTQPLSKEDDVVPRIAFEYNNTDRPVKHFHRDGVQNYTKLLLSPEHGVLFIGAKNAIFSLDIFNIAPNEFKNEVVWEVPEQKRNECHFKGKSLSSDCFNYIKILLQVNSTHVYVCGTYAFSPTCAYIHIANFSLAKSPFGNLLTEDGKGRCPFDPTYKSTAIMVDGNLYAGTVSNFQGNEPIISRSLGNKPPLKTENSLNWLQDPAFVGSEFIQDGVSGKTSGSNDGKIYFFFSETGKEFDFFENTIVSRIAQICTGDIGGERVLQKRWTTFLKAQLSCSLPDDGFPFNVIQDMFVLSTRKEDWENTTFYGVFTSQWYKGGGATSAVCAYSMEDVKRAFNGRYMEVNRETQQWYPYNHVVPEPRPGACITNAARAMNINSSFQMPDKVLNFAKDHFLMEEIVKSQPLLMKKHVKYIQITVDRVQTISGYYDVLFLGTENGILHKAIKVNHKVHIIEEITLFAEPQPVQNLILDSKQGMLYASSFSGVVQLPVSNCNIYPSCGECVLARDPYCAWDGNVCRDMRGLQTGLHWKQDVERGRPEQQCQQHDSSSLGPRALRPSPGTTSCETVTVRPNSFRVLTCKVQSNFATRTWTHNGAAVDDSFMVLPDGGIIATAEPLGVYECWAIEEDFWLLVANYCMRLDGSPEATTLHASRKSIQGLNDGPGSQGKGIIINPLSSESRFPQLTNGKTYWTEFVAVSVVFGLTLAVLSLVLLYRNRDKMKSLIKDGECSNIQQKKQRKIEIPHESLPLNGNPVQVVASEHHKGYQSLNDNHICSTPVLENALNDKDSGYPESPNNQMNQKNLYVEISAHCPHPRVRIGSEIKDSVV
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8340946..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438575)
location: region:8340946-8438575:1
so has part: feature:8340946-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438575:1:exon

XP_048471784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8340946-8341063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8437770-8438575:1:exon

sema4ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sema4ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba isoform X1
translation: MALGFPSYLLLAASTLCTIGFTQPLSKEDDVVPRIAFEYNNTDRPVKHFHRDGVQNYTKLLLSPEHGVLFIGAKNAIFSLDIFNIAPNEFKNEVVWEVPEQKRNECHFKGKSLSSDCFNYIKILLQVNSTHVYVCGTYAFSPTCAYIHIANFSLAKSPFGNLLTEDGKGRCPFDPTYKSTAIMVDGNLYAGTVSNFQGNEPIISRSLGNKPPLKTENSLNWLQDPAFVGSEFIQDGVSGKTSGSNDGKIYFFFSETGKEFDFFENTIVSRIAQICTGDIGGERVLQKRWTTFLKAQLSCSLPDDGFPFNVIQDMFVLSTRKEDWENTTFYGVFTSQWYKGGGATSAVCAYSMEDVKRAFNGRYMEVNRETQQWYPYNHVVPEPRPGACITNAARAMNINSSFQMPDKVLNFAKDHFLMEEIVKSQPLLMKKHVKYIQITVDRVQTISGYYDVLFLGTENGILHKAIKVNHKVHIIEEITLFAEPQPVQNLILDSKQGMLYASSFSGVVQLPVSNCNIYPSCGECVLARDPYCAWDGNVCRDMRGLQTGLHWKQDVERGRPEQQCQQHDSSSLGPRALRPSPGTTSCETVTVRPNSFRVLTCKVQSNFATRTWTHNGAAVDDSFMVLPDGGIIATAEPLGVYECWAIEEDFWLLVANYCMRLDGSPEATTLHASRKSIQGLNDGPGSQGKGIIINPLSSESRFPQLTNGKTYWTEFVAVSVVFGLTLAVLSLVLLYRNRDKMKSLIKDGECSNIQQKKQRKIEIPHESLPLNGNPVQVVASEHHKGYQSLNDNHICSTPVLENALNDKDSGYPESPNNQMNQKNLYVEISAHCPHPRVRIGSEIKDSVV
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8340946..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437770..8438575)
location: region:8340946-8438575:1
so has part: feature:8340946-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437770-8438575:1:exon

XP_048471785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8340946-8341063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8437770-8438575:1:exon

sema4ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sema4ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba isoform X2
translation: MALGFPSYLLLAASTLCTIGFTQPLSKEDDVVPRIAFEYNNTDRPVKHFHRDGVQNYTKLLLSPEHGVLFIGAKNAIFSLDIFNIAPNEFKNEVVWEVPEQKRNECHFKGKSLSSDCFNYIKILLQVNSTHVYVCGTYAFSPTCAYIHIANFSLAKSPFGNLLTEDGKGRCPFDPTYKSTAIMVDGNLYAGTVSNFQGNEPIISRSLGNKPPLKTENSLNWLQDPAFVGSEFIQDGVSGKTSGSNDGKIYFFFSETGKEFDFFENTIVSRIAQICTGDIGGERVLQKRWTTFLKAQLSCSLPDDGFPFNVIQDMFVLSTRKEDWENTTFYGVFTSQWYKGGGATSAVCAYSMEDVKRAFNGRYMEVNRETQQWYPYNHVVPEPRPGACITNAARAMNINSSFQMPDKVLNFAKDHFLMEEIVKSQPLLMKKHVKYIQITVDRVQTISGYYDVLFLGTENGILHKAIKVNHKVHIIEEITLFAEPQPVQNLILDSKQGMLYASSFSGVVQLPVSNCNIYPSCGECVLARDPYCAWDGNVCRDMRGLQTGLHWKQDVERGRPEQQCQQHDSSSLGPRALRPSRTTSCETVTVRPNSFRVLTCKVQSNFATRTWTHNGAAVDDSFMVLPDGGIIATAEPLGVYECWAIEEDFWLLVANYCMRLDGSPEATTLHASRKSIQGLNDGPGSQGKGIIINPLSSESRFPQLTNGKTYWTEFVAVSVVFGLTLAVLSLVLLYRNRDKMKSLIKDGECSNIQQKKQRKIEIPHESLPLNGNPVQVVASEHHKGYQSLNDNHICSTPVLENALNDKDSGYPESPNNQMNQKNLYVEISAHCPHPRVRIGSEIKDSVV
SIO_010081: sema4ba
subclass of: SO_0000673
so part of: sema4ba
location: join(8340946..8341063,8396446..8396606,8399093..8399155,8399234..8399332,8399430..8399541,8401802..8401918,8404690..8404847,8413387..8413568,8414929..8415079,8423198..8423408,8427325..8427440,8429324..8429481,8432835..8432929,8437773..8438575)
location: region:8340946-8438575:1
so has part: feature:8340946-8341063:1:exon
so has part: feature:8396446-8396606:1:exon
so has part: feature:8399093-8399155:1:exon
so has part: feature:8399234-8399332:1:exon
so has part: feature:8399430-8399541:1:exon
so has part: feature:8401802-8401918:1:exon
so has part: feature:8404690-8404847:1:exon
so has part: feature:8413387-8413568:1:exon
so has part: feature:8414929-8415079:1:exon
so has part: feature:8423198-8423408:1:exon
so has part: feature:8427325-8427440:1:exon
so has part: feature:8429324-8429481:1:exon
so has part: feature:8432835-8432929:1:exon
so has part: feature:8437773-8438575:1:exon

XP_048471786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8340946-8341063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8396446-8396606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8399093-8399155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8399234-8399332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8399430-8399541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8401802-8401918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8404690-8404847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8413387-8413568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8414929-8415079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8423198-8423408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8427325-8427440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8429324-8429481:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8432835-8432929:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8437773-8438575:1:exon

zgc:162879
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: zgc:162879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8545409..8583739
location: region:8545409-8583739:1
so has part: feature:8545409-8583739:1:exon
subclass of: SO_0000010

109921590
type: Gene
SIO_000068: ncbigene

position:8545409:1
position: 8545409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8583739:1
position: 8583739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8545409-8583739:1:exon

zgc:162879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zgc:162879
product: ras and EF-hand domain-containing protein, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616083.1
SIO_010081: zgc:162879
subclass of: SO_0000673
so part of: zgc:162879
location: join(8545409..8545565,8545848..8545997,8551981..8552071,8555236..8555331,8556182..8556259,8559204..8559319,8561015..8561083,8562674..8562755,8563721..8563800,8565708..8565927,8568571..8568690,8569842..8569986,8572978..8573059,8573711..8573825,8580384..8580460,8583320..8583739)
location: region:8545409-8583739:1
so has part: feature:8545409-8545565:1:exon
so has part: feature:8545848-8545997:1:exon
so has part: feature:8551981-8552071:1:exon
so has part: feature:8555236-8555331:1:exon
so has part: feature:8556182-8556259:1:exon
so has part: feature:8559204-8559319:1:exon
so has part: feature:8561015-8561083:1:exon
so has part: feature:8562674-8562755:1:exon
so has part: feature:8563721-8563800:1:exon
so has part: feature:8565708-8565927:1:exon
so has part: feature:8568571-8568690:1:exon
so has part: feature:8569842-8569986:1:exon
so has part: feature:8572978-8573059:1:exon
so has part: feature:8573711-8573825:1:exon
so has part: feature:8580384-8580460:1:exon
so has part: feature:8583320-8583739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8545409-8545565:1:exon

position:8545565:1
position: 8545565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8545848-8545997:1:exon

position:8545848:1
position: 8545848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8545997:1
position: 8545997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8551981-8552071:1:exon

position:8551981:1
position: 8551981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8552071:1
position: 8552071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8555236-8555331:1:exon

position:8555236:1
position: 8555236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8555331:1
position: 8555331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8556182-8556259:1:exon

position:8556182:1
position: 8556182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8556259:1
position: 8556259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8559204-8559319:1:exon

position:8559204:1
position: 8559204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8559319:1
position: 8559319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8561015-8561083:1:exon

position:8561015:1
position: 8561015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8561083:1
position: 8561083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8562674-8562755:1:exon

position:8562674:1
position: 8562674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8562755:1
position: 8562755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8563721-8563800:1:exon

position:8563721:1
position: 8563721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8563800:1
position: 8563800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8565708-8565927:1:exon

position:8565708:1
position: 8565708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8565927:1
position: 8565927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8568571-8568690:1:exon

position:8568571:1
position: 8568571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8568690:1
position: 8568690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8569842-8569986:1:exon

position:8569842:1
position: 8569842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8569986:1
position: 8569986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8572978-8573059:1:exon

position:8572978:1
position: 8572978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8573059:1
position: 8573059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8573711-8573825:1:exon

position:8573711:1
position: 8573711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8573825:1
position: 8573825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8580384-8580460:1:exon

position:8580384:1
position: 8580384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8580460:1
position: 8580460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8583320-8583739:1:exon

position:8583320:1
position: 8583320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:162879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zgc:162879
product: ras and EF-hand domain-containing protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048616082.1
SIO_010081: zgc:162879
subclass of: SO_0000673
so part of: zgc:162879
location: join(8545410..8545565,8545848..8545997,8551981..8552071,8555236..8555331,8556182..8556259,8559204..8559319,8561015..8561083,8562674..8562755,8563721..8563800,8565747..8565927,8568571..8568690,8569842..8569986,8572978..8573059,8573711..8573825,8579049..8579168,8580384..8580460,8583320..8583739)
location: region:8545410-8583739:1
so has part: feature:8545410-8545565:1:exon
so has part: feature:8545848-8545997:1:exon
so has part: feature:8551981-8552071:1:exon
so has part: feature:8555236-8555331:1:exon
so has part: feature:8556182-8556259:1:exon
so has part: feature:8559204-8559319:1:exon
so has part: feature:8561015-8561083:1:exon
so has part: feature:8562674-8562755:1:exon
so has part: feature:8563721-8563800:1:exon
so has part: feature:8565747-8565927:1:exon
so has part: feature:8568571-8568690:1:exon
so has part: feature:8569842-8569986:1:exon
so has part: feature:8572978-8573059:1:exon
so has part: feature:8573711-8573825:1:exon
so has part: feature:8579049-8579168:1:exon
so has part: feature:8580384-8580460:1:exon
so has part: feature:8583320-8583739:1:exon

position:8545410:1
position: 8545410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8545410-8545565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8545848-8545997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8551981-8552071:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8555236-8555331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8556182-8556259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8559204-8559319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8561015-8561083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8562674-8562755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8563721-8563800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8565747-8565927:1:exon

position:8565747:1
position: 8565747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8568571-8568690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8569842-8569986:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8572978-8573059:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8573711-8573825:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8579049-8579168:1:exon

position:8579049:1
position: 8579049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8579168:1
position: 8579168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8580384-8580460:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8583320-8583739:1:exon

zgc:162879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zgc:162879
product: ras and EF-hand domain-containing protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020521613.2
SIO_010081: zgc:162879
subclass of: SO_0000673
so part of: zgc:162879
location: join(8545411..8545565,8545848..8545997,8551981..8552071,8555236..8555331,8556182..8556259,8559204..8559319,8561015..8561083,8562674..8562755,8563721..8563800,8565708..8565927,8568571..8568690,8569842..8569986,8572978..8573059,8573711..8573825,8579049..8579168,8580384..8580460,8583320..8583739)
location: region:8545411-8583739:1
so has part: feature:8545411-8545565:1:exon
so has part: feature:8545848-8545997:1:exon
so has part: feature:8551981-8552071:1:exon
so has part: feature:8555236-8555331:1:exon
so has part: feature:8556182-8556259:1:exon
so has part: feature:8559204-8559319:1:exon
so has part: feature:8561015-8561083:1:exon
so has part: feature:8562674-8562755:1:exon
so has part: feature:8563721-8563800:1:exon
so has part: feature:8565708-8565927:1:exon
so has part: feature:8568571-8568690:1:exon
so has part: feature:8569842-8569986:1:exon
so has part: feature:8572978-8573059:1:exon
so has part: feature:8573711-8573825:1:exon
so has part: feature:8579049-8579168:1:exon
so has part: feature:8580384-8580460:1:exon
so has part: feature:8583320-8583739:1:exon

position:8545411:1
position: 8545411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8545411-8545565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8545848-8545997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8551981-8552071:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8555236-8555331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8556182-8556259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8559204-8559319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8561015-8561083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8562674-8562755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8563721-8563800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8565708-8565927:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8568571-8568690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8569842-8569986:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8572978-8573059:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8573711-8573825:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8579049-8579168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8580384-8580460:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8583320-8583739:1:exon

zgc:162879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zgc:162879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras and EF-hand domain-containing protein isoform X1
translation: METGKLEQTLRRTEAMADARLAEMEEDVQQQAMKLEQKIRREEQAKLEAKVAEIQKRHESEVMDLQAVIDRMKKLNEELWNSNSKGDISALREQLDELTRENEYLRSSLLQSQTEISILEAGLDKCKNELADRLLDQERTKETIQKLTEENEISTNQIQMLQEANKALYDSNNGLRTALERNHSSNKNKYSVNGSVLERGMKSEIQNGVADTGYNSVLNGNEESMILNSDDSRQRISEVANWADRYLDSGVSTSQDMVDYSSDDYNSDGSNDSHETMHYSYSYVASDAEMPEFKSEVDGLPGIRKPSRPVSRSSSIASSRRRLPAFTSKNTGNAVENAKPDGPLYRLVLAGDAGSGKSSFLLRLCMNEFKGHIPTTLGVDFQMKKLLVDGESATLQIWDTAGQERFRSIAKSYFRKAHGVLLLYDVTSENSFLNVREWIDEIKSSTDFPTPIILIGNKIDLRNEMSPTQRGTVLTAHGEKLAMTYNALFCETSAKDGTNVVEAVLHLAREAKKNAKIRDSVQPVTKLIAADGKKALKNCCKTQN
SIO_010081: zgc:162879
subclass of: SO_0000673
so part of: zgc:162879
location: join(8545963..8545997,8551981..8552071,8555236..8555331,8556182..8556259,8559204..8559319,8561015..8561083,8562674..8562755,8563721..8563800,8565708..8565927,8568571..8568690,8569842..8569986,8572978..8573059,8573711..8573825,8579049..8579168,8580384..8580460,8583320..8583428)
location: region:8545963-8583428:1
so has part: feature:8545963-8545997:1:exon
so has part: feature:8551981-8552071:1:exon
so has part: feature:8555236-8555331:1:exon
so has part: feature:8556182-8556259:1:exon
so has part: feature:8559204-8559319:1:exon
so has part: feature:8561015-8561083:1:exon
so has part: feature:8562674-8562755:1:exon
so has part: feature:8563721-8563800:1:exon
so has part: feature:8565708-8565927:1:exon
so has part: feature:8568571-8568690:1:exon
so has part: feature:8569842-8569986:1:exon
so has part: feature:8572978-8573059:1:exon
so has part: feature:8573711-8573825:1:exon
so has part: feature:8579049-8579168:1:exon
so has part: feature:8580384-8580460:1:exon
so has part: feature:8583320-8583428:1:exon

XP_020377202.2
type: Protein
SIO_000068: ncbiprotein

position:8545963:1
position: 8545963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8583428:1
position: 8583428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8545963-8545997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8551981-8552071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8555236-8555331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8556182-8556259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8559204-8559319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8561015-8561083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8562674-8562755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8563721-8563800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8565708-8565927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8568571-8568690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8569842-8569986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8572978-8573059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8573711-8573825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8579049-8579168:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8580384-8580460:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8583320-8583428:1:exon

zgc:162879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zgc:162879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras and EF-hand domain-containing protein isoform X3
translation: METGKLEQTLRRTEAMADARLAEMEEDVQQQAMKLEQKIRREEQAKLEAKVAEIQKRHESEVMDLQAVIDRMKKLNEELWNSNSKGDISALREQLDELTRENEYLRSSLLQSQTEISILEAGLDKCKNELADRLLDQERTKETIQKLTEENEISTNQIQMLQEANKALYDSNNGLRTALERNHSSNKNKYSVNGSVLERGMKSEIQNGVADTGYNSVLNGNEESMILNSDDSRQRISEVANWADRYLDSGVSTSQDMVDYSSDDYNSDGSNDSHETMHYSYSYVASDAEMPEFKSEVDGLPGIRKPSRPVSRSSSIASSRRRLPAFTSKNTGNAVENAKPDGPLYRLVLAGDAGSGKSSFLLRLCMNEFKGHIPTTLGVDFQMKKLLVDGESATLQIWDTAGQERFRSIAKSYFRKAHGVLLLYDVTSENSFLNVREWIDEIKTYNALFCETSAKDGTNVVEAVLHLAREAKKNAKIRDSVQPVTKLIAADGKKALKNCCKTQN
SIO_010081: zgc:162879
subclass of: SO_0000673
so part of: zgc:162879
location: join(8545963..8545997,8551981..8552071,8555236..8555331,8556182..8556259,8559204..8559319,8561015..8561083,8562674..8562755,8563721..8563800,8565708..8565927,8568571..8568690,8569842..8569986,8572978..8573059,8573711..8573825,8580384..8580460,8583320..8583428)
location: region:8545963-8583428:1
so has part: feature:8545963-8545997:1:exon
so has part: feature:8551981-8552071:1:exon
so has part: feature:8555236-8555331:1:exon
so has part: feature:8556182-8556259:1:exon
so has part: feature:8559204-8559319:1:exon
so has part: feature:8561015-8561083:1:exon
so has part: feature:8562674-8562755:1:exon
so has part: feature:8563721-8563800:1:exon
so has part: feature:8565708-8565927:1:exon
so has part: feature:8568571-8568690:1:exon
so has part: feature:8569842-8569986:1:exon
so has part: feature:8572978-8573059:1:exon
so has part: feature:8573711-8573825:1:exon
so has part: feature:8580384-8580460:1:exon
so has part: feature:8583320-8583428:1:exon

XP_048472040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8545963-8545997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8551981-8552071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8555236-8555331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8556182-8556259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8559204-8559319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8561015-8561083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8562674-8562755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8563721-8563800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8565708-8565927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8568571-8568690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8569842-8569986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8572978-8573059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8573711-8573825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8580384-8580460:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8583320-8583428:1:exon

zgc:162879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zgc:162879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras and EF-hand domain-containing protein isoform X2
translation: METGKLEQTLRRTEAMADARLAEMEEDVQQQAMKLEQKIRREEQAKLEAKVAEIQKRHESEVMDLQAVIDRMKKLNEELWNSNSKGDISALREQLDELTRENEYLRSSLLQSQTEISILEAGLDKCKNELADRLLDQERTKETIQKLTEENEISTNQIQMLQEANKALYDSNNGLRTALERNHSSNKNKYSVNGSVLERGMKSEIQNGVADTGYNSDDSRQRISEVANWADRYLDSGVSTSQDMVDYSSDDYNSDGSNDSHETMHYSYSYVASDAEMPEFKSEVDGLPGIRKPSRPVSRSSSIASSRRRLPAFTSKNTGNAVENAKPDGPLYRLVLAGDAGSGKSSFLLRLCMNEFKGHIPTTLGVDFQMKKLLVDGESATLQIWDTAGQERFRSIAKSYFRKAHGVLLLYDVTSENSFLNVREWIDEIKSSTDFPTPIILIGNKIDLRNEMSPTQRGTVLTAHGEKLAMTYNALFCETSAKDGTNVVEAVLHLAREAKKNAKIRDSVQPVTKLIAADGKKALKNCCKTQN
SIO_010081: zgc:162879
subclass of: SO_0000673
so part of: zgc:162879
location: join(8545963..8545997,8551981..8552071,8555236..8555331,8556182..8556259,8559204..8559319,8561015..8561083,8562674..8562755,8563721..8563800,8565747..8565927,8568571..8568690,8569842..8569986,8572978..8573059,8573711..8573825,8579049..8579168,8580384..8580460,8583320..8583428)
location: region:8545963-8583428:1
so has part: feature:8545963-8545997:1:exon
so has part: feature:8551981-8552071:1:exon
so has part: feature:8555236-8555331:1:exon
so has part: feature:8556182-8556259:1:exon
so has part: feature:8559204-8559319:1:exon
so has part: feature:8561015-8561083:1:exon
so has part: feature:8562674-8562755:1:exon
so has part: feature:8563721-8563800:1:exon
so has part: feature:8565747-8565927:1:exon
so has part: feature:8568571-8568690:1:exon
so has part: feature:8569842-8569986:1:exon
so has part: feature:8572978-8573059:1:exon
so has part: feature:8573711-8573825:1:exon
so has part: feature:8579049-8579168:1:exon
so has part: feature:8580384-8580460:1:exon
so has part: feature:8583320-8583428:1:exon

XP_048472039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8545963-8545997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8551981-8552071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8555236-8555331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8556182-8556259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8559204-8559319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8561015-8561083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8562674-8562755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8563721-8563800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8565747-8565927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8568571-8568690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8569842-8569986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8572978-8573059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8573711-8573825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8579049-8579168:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8580384-8580460:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8583320-8583428:1:exon

LOC125486813
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125486813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8556277..8579651)
location: region:8556277-8579651:-1
so has part: feature:8556277-8579651:-1:exon
subclass of: SO_0000011

125486813
type: Gene
SIO_000068: ncbigene

position:8556277:-1
position: 8556277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8579651:-1
position: 8579651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8556277-8579651:-1:exon

LOC125486813
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125486813
product: uncharacterized LOC125486813
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007265441.1
SIO_010081: LOC125486813
subclass of: SO_0000673
so part of: LOC125486813
location: complement(join(8556277..8556534,8559776..8559907,8579602..8579651))
location: region:8556277-8579651:-1
so has part: feature:8579602-8579651:-1:exon
so has part: feature:8559776-8559907:-1:exon
so has part: feature:8556277-8556534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8579602-8579651:-1:exon

position:8579602:-1
position: 8579602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8559776-8559907:-1:exon

position:8559776:-1
position: 8559776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8559907:-1
position: 8559907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8556277-8556534:-1:exon

position:8556534:-1
position: 8556534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

serf2a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: serf2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8611284..8620179
location: region:8611284-8620179:1
so has part: feature:8611284-8620179:1:exon
subclass of: SO_0000010

109921591
type: Gene
SIO_000068: ncbigene

position:8611284:1
position: 8611284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8620179:1
position: 8620179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8611284-8620179:1:exon

serf2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: serf2a
product: small EDRK-rich factor 2a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020521614.2
SIO_010081: serf2a
subclass of: SO_0000673
so part of: serf2a
location: join(8611284..8611424,8618694..8618802,8619720..8620179)
location: region:8611284-8620179:1
so has part: feature:8611284-8611424:1:exon
so has part: feature:8618694-8618802:1:exon
so has part: feature:8619720-8620179:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8611284-8611424:1:exon

position:8611424:1
position: 8611424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8618694-8618802:1:exon

position:8618694:1
position: 8618694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8618802:1
position: 8618802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8619720-8620179:1:exon

position:8619720:1
position: 8619720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

serf2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: serf2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small EDRK-rich factor 2
translation: MTRGNQRELARQKNAKKSNEQSKRKRKDDGLSAAARKQRDAEIMQQKQRANKNSAAAAGANAGTSN
SIO_010081: serf2a
subclass of: SO_0000673
so part of: serf2a
location: join(8611418..8611424,8618694..8618802,8619720..8619804)
location: region:8611418-8619804:1
so has part: feature:8611418-8611424:1:exon
so has part: feature:8618694-8618802:1:exon
so has part: feature:8619720-8619804:1:exon

XP_020377203.1
type: Protein
SIO_000068: ncbiprotein

position:8611418:1
position: 8611418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8619804:1
position: 8619804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition