Rhincodon typus isolate 14 chromosome 28, sRhiTyp1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
REFSEQ INFORMATION: The reference sequence is identical to\nCM038825.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
ectonucleoside triphosphate diphosphohydrolase 8-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 37% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: polyA evidence [ECO:0006239]
NOTCH regulated ankyrin repeat protein a
notch-regulated ankyrin repeat-containing protein A
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: exonuclease mut-7 homolog
complement component 8, gamma polypeptide
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
coiled-coil domain-containing protein 183
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 94% coverage of the annotated genomic feature by RNAseq alignments
rab-like protein 6, transcript variant X3
rab-like protein 6, transcript variant X1
rab-like protein 6, transcript variant X2
UDP-N-acetylglucosamine pyrophosphorylase 1, like 1
UDP-N-acetylhexosamine pyrophosphorylase-like protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 23% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 long SRA reads, 16 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
ubiquinone biosynthesis protein COQ4 homolog, mitochondrial
peptidylprolyl isomerase (cyclophilin)-like 3
peptidyl-prolyl cis-trans isomerase-like 3
suppressor APC domain containing 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
suppressor APC domain containing 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
suppressor APC domain containing 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
suppressor APC domain-containing protein 2 isoform X3
suppressor APC domain-containing protein 2 isoform X2
suppressor APC domain-containing protein 2 isoform X1
endothelial differentiation-related factor 1
endothelial differentiation-related factor 1 homolog
sodium-dependent phosphate transport protein 2B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 542 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
tubulin beta chain-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 545 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
tubulin beta chain-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
tubulin beta chain-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
tubulin beta chain-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC125486333, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized LOC125486333, transcript variant X2
aminolevulinate dehydratase, transcript variant X4
aminolevulinate dehydratase, transcript variant X2
aminolevulinate dehydratase, transcript variant X3
aminolevulinate dehydratase, transcript variant X1
delta-aminolevulinic acid dehydratase isoform X1
delta-aminolevulinic acid dehydratase isoform X2
NADPH dependent diflavin oxidoreductase 1
NADPH-dependent diflavin oxidoreductase 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
torsin family 4, member Aa, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
torsin family 4, member Aa, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
torsin family 4, member Aa, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
torsin family 4, member Aa, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
discoidin domain-containing receptor 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 502 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
haloacid dehalogenase-like hydrolase domain containing 3, transcript variant X2
haloacid dehalogenase-like hydrolase domain containing 3, transcript variant X3
haloacid dehalogenase-like hydrolase domain containing 3, transcript variant X1
haloacid dehalogenase-like hydrolase domain-containing protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: B box and SPRY domain-containing protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
PRP4 pre-mRNA processing factor 4 homolog (yeast), transcript variant X1
PRP4 pre-mRNA processing factor 4 homolog (yeast), transcript variant X2
PRP4 pre-mRNA processing factor 4 homolog (yeast), transcript variant X4
U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
U4/U6 small nuclear ribonucleoprotein Prp4 isoform X3
PRP4 pre-mRNA processing factor 4 homolog (yeast), transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2
cell division cycle 26 homolog, transcript variant X2
cell division cycle 26 homolog, transcript variant X1
anaphase-promoting complex subunit CDC26
solute carrier family 31 member 1, transcript variant X2
solute carrier family 31 member 1, transcript variant X1
high affinity copper uptake protein 1 isoform X1
high affinity copper uptake protein 1 isoform X2
leucine rich repeat and sterile alpha motif containing 1, transcript variant X2
leucine rich repeat and sterile alpha motif containing 1, transcript variant X1
leucine rich repeat and sterile alpha motif containing 1, transcript variant X3
E3 ubiquitin-protein ligase LRSAM1 isoform X2
E3 ubiquitin-protein ligase LRSAM1 isoform X1
E3 ubiquitin-protein ligase LRSAM1 isoform X3
polymerase (DNA directed), epsilon 3 (p17 subunit), transcript variant X1
polymerase (DNA directed), epsilon 3 (p17 subunit), transcript variant X2
uncharacterized LOC125486404, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC125486404, transcript variant X2
uncharacterized protein LOC125486404 isoform X1
uncharacterized protein LOC125486404 isoform X2
cellular communication network factor 1, like 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
zinc finger MYND domain-containing protein 19
mitochondrial ribosomal protein L41, transcript variant X2
mitochondrial ribosomal protein L41, transcript variant X1
mitochondrial ribosomal protein L41, transcript variant X3
39S ribosomal protein L41, mitochondrial
patatin-like phospholipase domain containing 7b, transcript variant X3
patatin-like phospholipase domain containing 7b, transcript variant X1
patatin-like phospholipase domain containing 7b, transcript variant X2
patatin-like phospholipase domain-containing protein 7 isoform X3
patatin-like phospholipase domain-containing protein 7 isoform X1
patatin-like phospholipase domain-containing protein 7 isoform X2
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
NMDA receptor synaptonuclear signaling and neuronal migration factor b
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
NMDA receptor synaptonuclear signaling and neuronal migration factor
neural proliferation differentiation and control protein 1
POU domain, class 5, transcription factor 3-like
fucosyltransferase 7, transcript variant X2
fucosyltransferase 7, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
fucosyltransferase 7, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ATP-binding cassette, sub-family A (ABC1), member 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
ATP-binding cassette sub-family A member 2
chloride intracellular channel protein 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized protein LOC109932915 isoform X1
uncharacterized LOC125486387, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC125486387, transcript variant X2
bone morphogenetic protein/retinoic acid inducible neural-specific 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
BMP/retinoic acid-inducible neural-specific protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
dual specificity testis-specific protein kinase 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
mannosidase, alpha, class 1B, member 1b, transcript variant X2
mannosidase, alpha, class 1B, member 1b, transcript variant X1
mannosidase, alpha, class 1B, member 1b isoform X2
mannosidase, alpha, class 1B, member 1b isoform X1
dual specificity testis-specific protein kinase 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
probable voltage-dependent N-type calcium channel subunit alpha-1B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
euchromatic histone-lysine N-methyltransferase 1b, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 long SRA reads, 31 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
euchromatic histone-lysine N-methyltransferase 1b, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
euchromatic histone-lysine N-methyltransferase 1b, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
euchromatic histone-lysine N-methyltransferase 1b, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
histone-lysine N-methyltransferase EHMT1 isoform X3
histone-lysine N-methyltransferase EHMT1 isoform X2
histone-lysine N-methyltransferase EHMT1 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC125486400, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC125486400, transcript variant X2
lysophosphatidic acid receptor 6-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
lysophosphatidic acid receptor 6-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
lysophosphatidic acid receptor 6-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC125486383, transcript variant X3
uncharacterized LOC125486383, transcript variant X4
uncharacterized LOC125486383, transcript variant X2
uncharacterized LOC125486383, transcript variant X1
negative elongation factor complex member B
ER degradation-enhancing alpha-mannosidase-like protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
probable low affinity copper uptake protein 2
syntaxin-binding protein 1, transcript variant X1
syntaxin-binding protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 8% coverage of the annotated genomic feature by RNAseq alignments
transmembrane protein 268, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transmembrane protein 268, transcript variant X2
tumor necrosis factor ligand superfamily member 6-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 75% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
tumor necrosis factor ligand superfamily member 15-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
multiple epidermal growth factor-like domains protein 9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
regulator of G protein signaling 3a, transcript variant X2
regulator of G protein signaling 3a, transcript variant X1
regulator of G protein signaling 3a, transcript variant X3
regulator of G-protein signaling 3a isoform X1
regulator of G-protein signaling 3a isoform X3
regulator of G-protein signaling 3a isoform X2
regulator of G protein signaling 3a, transcript variant X4
regulator of G-protein signaling 3a isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
regulator of G protein signaling 3a, transcript variant X7
regulator of G protein signaling 3a, transcript variant X6
regulator of G-protein signaling 3a isoform X6
regulator of G protein signaling 3a, transcript variant X5
regulator of G-protein signaling 3a isoform X5
regulator of G-protein signaling 3a isoform X7
regulator of G protein signaling 3a, transcript variant X9
regulator of G-protein signaling 3a isoform X9
regulator of G protein signaling 3a, transcript variant X8
regulator of G-protein signaling 3a isoform X8
COORDINATES: nucleotide motif:Rfam:12.0:RF00003
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125486336, transcript variant X3
uncharacterized LOC125486336, transcript variant X4
uncharacterized LOC125486336, transcript variant X2
uncharacterized LOC125486336, transcript variant X5
uncharacterized LOC125486336, transcript variant X6
uncharacterized LOC125486336, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 60% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
probable G-protein coupled receptor 82, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
probable G-protein coupled receptor 82, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
probable G-protein coupled receptor 82, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
probable G-protein coupled receptor 82, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
CDK5 regulatory subunit-associated protein 2-like isoform X14
CDK5 regulatory subunit-associated protein 2-like isoform X13
uncharacterized LOC109918588, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC109918588, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC109918588, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized protein LOC109918588 isoform X1
uncharacterized protein LOC109918588 isoform X2
mitochondrial ribosome recycling factor, transcript variant X2
mitochondrial ribosome recycling factor, transcript variant X1
ribosome-recycling factor, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
NADH:ubiquinone oxidoreductase subunit A8
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
uncharacterized protein LOC559906 homolog, transcript variant X2
uncharacterized protein LOC559906 homolog, transcript variant X1
keratin, type I cytoskeletal 18 isoform X1
keratin, type I cytoskeletal 18 isoform X2
zinc finger and BTB domain containing 26, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
zinc finger and BTB domain containing 26, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
zinc finger and BTB domain containing 26, transcript variant X1
zinc finger and BTB domain-containing protein 26 isoform X1
zinc finger and BTB domain-containing protein 26 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 20 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
spermatid perinuclear RNA binding protein
spermatid perinuclear RNA-binding protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins
protein crumbs homolog 2-like, transcript variant X1
protein crumbs homolog 2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein crumbs homolog 1-like isoform X1
protein crumbs homolog 2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
protein crumbs homolog 2-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 69% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
LIM/homeobox protein Lhx2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
LIM/homeobox protein Lhx2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
nuclear receptor subfamily 5 group A member 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
nuclear receptor subfamily 6 group A member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
actin-related protein 2/3 complex subunit 5-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
protein phosphatase 6, catalytic subunit
serine/threonine-protein phosphatase 6 catalytic subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
Rab9 effector protein with kelch motifs, transcript variant X2
Rab9 effector protein with kelch motifs, transcript variant X1
rab9 effector protein with kelch motifs isoform X1
rab9 effector protein with kelch motifs isoform X2
GTPase activating protein and VPS9 domains 1, transcript variant X2
GTPase activating protein and VPS9 domains 1, transcript variant X4
GTPase activating protein and VPS9 domains 1, transcript variant X6
GTPase activating protein and VPS9 domains 1, transcript variant X3
GTPase activating protein and VPS9 domains 1, transcript variant X1
GTPase activating protein and VPS9 domains 1, transcript variant X5
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X3
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X2
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X4
MAPK associated protein 1, transcript variant X1
MAPK associated protein 1, transcript variant X3
target of rapamycin complex 2 subunit MAPKAP1 isoform X1
target of rapamycin complex 2 subunit MAPKAP1 isoform X3
MAPK associated protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
target of rapamycin complex 2 subunit MAPKAP1 isoform X2
pre-B-cell leukemia transcription factor 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
pre-B-cell leukemia transcription factor 3-like isoform X2
pre-B-cell leukemia transcription factor 3-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pre-B-cell leukemia transcription factor 3-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pre-B-cell leukemia transcription factor 3
uncharacterized LOC125486398, transcript variant X2
uncharacterized LOC125486398, transcript variant X1
LIM/homeobox protein LMX-1.2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
LIM/homeobox protein LMX-1.2, transcript variant X4
LIM/homeobox protein LMX-1.2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
LIM/homeobox protein LMX-1.2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
zinc finger and BTB domain containing 43
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 43
uncharacterized LOC125486350, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC125486350, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments
zinc finger and BTB domain containing 34, transcript variant X1
zinc finger and BTB domain-containing protein 34 isoform X1
zinc finger and BTB domain containing 34, transcript variant X2
zinc finger and BTB domain containing 34, transcript variant X3
zinc finger and BTB domain-containing protein 34 isoform X2
zinc finger and BTB domain containing 34, transcript variant X4
zinc finger and BTB domain-containing protein 34 isoform X3
Ral GEF with PH domain and SH3 binding motif 1, transcript variant X1
Ral GEF with PH domain and SH3 binding motif 1, transcript variant X6
Ral GEF with PH domain and SH3 binding motif 1, transcript variant X2
Ral GEF with PH domain and SH3 binding motif 1, transcript variant X4
Ral GEF with PH domain and SH3 binding motif 1, transcript variant X3
Ral GEF with PH domain and SH3 binding motif 1, transcript variant X5
ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
F-box and WD repeat domain containing 2, transcript variant X2
F-box and WD repeat domain containing 2, transcript variant X1
F-box/WD repeat-containing protein 2 isoform X2
F-box/WD repeat-containing protein 2 isoform X1
solute carrier family 2 member 8, transcript variant X2
solute carrier family 2 member 8, transcript variant X1
solute carrier family 2, facilitated glucose transporter member 8 isoform X1
solute carrier family 2, facilitated glucose transporter member 8 isoform X2
GTPase activating Rap/RanGAP domain like 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
GTPase-activating Rap/Ran-GAP domain-like protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83% coverage of the annotated genomic feature by RNAseq alignments
tubulin tyrosine ligase-like family, member 11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
DAB2 interacting protein b, transcript variant X6
DAB2 interacting protein b, transcript variant X7
DAB2 interacting protein b, transcript variant X5
DAB2 interacting protein b, transcript variant X4
DAB2 interacting protein b, transcript variant X8
DAB2 interacting protein b, transcript variant X9
DAB2 interacting protein b, transcript variant X2
DAB2 interacting protein b, transcript variant X1
DAB2 interacting protein b, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized protein LOC100148058 homolog, transcript variant X1
ras/Rap GTPase-activating protein SynGAP isoform X1
uncharacterized protein LOC100148058 homolog, transcript variant X4
uncharacterized protein LOC100148058 homolog, transcript variant X3
ras/Rap GTPase-activating protein SynGAP isoform X4
ras/Rap GTPase-activating protein SynGAP isoform X3
uncharacterized protein LOC100148058 homolog, transcript variant X2
ras/Rap GTPase-activating protein SynGAP isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
TNF receptor-associated factor 1, transcript variant X1
TNF receptor-associated factor 1, transcript variant X3
TNF receptor-associated factor 1, transcript variant X4
TNF receptor-associated factor 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
TNF receptor-associated factor 1-like, transcript variant X1
TNF receptor-associated factor 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments
TNF receptor-associated factor 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
TNF receptor-associated factor 1-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
TNF receptor-associated factor 1-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
TNF receptor-associated factor 1-like isoform X1
TNF receptor-associated factor 1-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ras-related protein Rab-14, transcript variant X4
ras-related protein Rab-14, transcript variant X2
ras-related protein Rab-14, transcript variant X1
ras-related protein Rab-14, transcript variant X5
ras-related protein Rab-14, transcript variant X3
erythrocyte band 7 integral membrane protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
sperm acrosome associated 9, transcript variant X2
sperm acrosome associated 9, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
general transcription factor IIIC, polypeptide 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 long SRA reads, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
general transcription factor IIIC, polypeptide 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
general transcription factor 3C polypeptide 4
DEAD (Asp-Glu-Ala-Asp) box polypeptide 31, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
DEAD (Asp-Glu-Ala-Asp) box polypeptide 31, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
DEAD (Asp-Glu-Ala-Asp) box polypeptide 31, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
DEAD (Asp-Glu-Ala-Asp) box polypeptide 31, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
DEAD (Asp-Glu-Ala-Asp) box polypeptide 31, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
probable ATP-dependent RNA helicase DDX31 isoform X1
probable ATP-dependent RNA helicase DDX31 isoform X2
probable ATP-dependent RNA helicase DDX31 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
cilia and flagella associated protein 77, transcript variant X4
cilia and flagella associated protein 77, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
cilia and flagella associated protein 77, transcript variant X1
cilia and flagella associated protein 77, transcript variant X3
cilia and flagella associated protein 77, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
cilia- and flagella-associated protein 77 isoform X2
cilia- and flagella-associated protein 77 isoform X1
cilia and flagella associated protein 77, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
cilia- and flagella-associated protein 77 isoform X3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transcription termination factor 1
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:12.0:RF00614
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 long SRA reads, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
mediator of RNA polymerase II transcription subunit 27
rap guanine nucleotide exchange factor 1-like, transcript variant X3
rap guanine nucleotide exchange factor 1-like, transcript variant X4
rap guanine nucleotide exchange factor 1-like, transcript variant X5
rap guanine nucleotide exchange factor 1-like, transcript variant X1
rap guanine nucleotide exchange factor 1-like, transcript variant X2
rap guanine nucleotide exchange factor 1-like isoform X3
rap guanine nucleotide exchange factor 1-like isoform X4
rap guanine nucleotide exchange factor 1-like isoform X5
rap guanine nucleotide exchange factor 1-like isoform X1
rap guanine nucleotide exchange factor 1-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 151 long SRA reads, 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
phytanoyl-CoA dioxygenase domain containing 1, transcript variant X1
phytanoyl-CoA dioxygenase domain containing 1, transcript variant X2
phytanoyl-CoA dioxygenase domain-containing protein 1 isoform X1
phytanoyl-CoA dioxygenase domain-containing protein 1 isoform X2
volume-regulated anion channel subunit LRRC8D-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
leucine rich repeat containing 8 VRAC subunit Aa, transcript variant X4
leucine rich repeat containing 8 VRAC subunit Aa, transcript variant X3
leucine rich repeat containing 8 VRAC subunit Aa, transcript variant X2
leucine rich repeat containing 8 VRAC subunit Aa, transcript variant X5
leucine rich repeat containing 8 VRAC subunit Aa, transcript variant X1
leucine rich repeat containing 8 VRAC subunit Aa isoform X1
leucine rich repeat containing 8 VRAC subunit Aa isoform X2
kynurenine--oxoglutarate transaminase 1, transcript variant X1
kynurenine--oxoglutarate transaminase 1, transcript variant X2
kynurenine--oxoglutarate transaminase 1, transcript variant X3
kynurenine--oxoglutarate transaminase 1 isoform X1
kynurenine--oxoglutarate transaminase 1 isoform X2
kynurenine--oxoglutarate transaminase 3 isoform X3
uncharacterized LOC109936100, transcript variant X1
uncharacterized LOC109936100, transcript variant X2
folylpolyglutamate synthase, mitochondrial
cyclin-dependent kinase 9 (CDC2-related kinase)
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
SH2 domain-containing protein 3C-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
SH2 domain-containing protein 3C-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
SH2 domain-containing protein 3C-like isoform X1
SH2 domain-containing protein 3C-like isoform X2
formin-binding protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90 long SRA reads, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
formin-binding protein 1, transcript variant X4
formin-binding protein 1, transcript variant X6
formin-binding protein 1, transcript variant X5
formin-binding protein 1, transcript variant X3
formin-binding protein 1, transcript variant X1
G protein-coupled receptor 107, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
G protein-coupled receptor 107, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
G protein-coupled receptor 107, transcript variant X1
G protein-coupled receptor 107, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
far upstream element (FUSE) binding protein 3, transcript variant X4
far upstream element (FUSE) binding protein 3, transcript variant X2
far upstream element (FUSE) binding protein 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
far upstream element (FUSE) binding protein 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
far upstream element-binding protein 3 isoform X4
far upstream element-binding protein 3 isoform X2
far upstream element (FUSE) binding protein 3, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
far upstream element-binding protein 3 isoform X3
far upstream element-binding protein 3 isoform X1
argininosuccinate synthase 1, transcript variant X1
argininosuccinate synthase 1, transcript variant X2
adenylate kinase 5, like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
adenylate kinase 5, like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1-like, transcript variant X2
spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1-like, transcript variant X1
spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1-like isoform X1
spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1-like isoform X2
kelch-like protein 20, transcript variant X2
kelch-like protein 20, transcript variant X1
proteasome 26S subunit, non-ATPase 5, transcript variant X4
proteasome 26S subunit, non-ATPase 5, transcript variant X3
proteasome 26S subunit, non-ATPase 5, transcript variant X2
proteasome 26S subunit, non-ATPase 5, transcript variant X1
26S proteasome non-ATPase regulatory subunit 5 isoform X4
26S proteasome non-ATPase regulatory subunit 5 isoform X3
26S proteasome non-ATPase regulatory subunit 5 isoform X2
26S proteasome non-ATPase regulatory subunit 5 isoform X1
coiled-coil domain-containing protein 180-like
ral guanine nucleotide dissociation stimulator-like, transcript variant X5
ral guanine nucleotide dissociation stimulator-like isoform X5
ral guanine nucleotide dissociation stimulator-like, transcript variant X3
ral guanine nucleotide dissociation stimulator-like, transcript variant X1
ral guanine nucleotide dissociation stimulator-like, transcript variant X7
ral guanine nucleotide dissociation stimulator-like, transcript variant X6
ral guanine nucleotide dissociation stimulator-like, transcript variant X2
ral guanine nucleotide dissociation stimulator-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
ral guanine nucleotide dissociation stimulator-like isoform X1
ral guanine nucleotide dissociation stimulator-like isoform X6
ral guanine nucleotide dissociation stimulator-like isoform X2
ral guanine nucleotide dissociation stimulator-like isoform X4
ral guanine nucleotide dissociation stimulator-like isoform X7
ral guanine nucleotide dissociation stimulator-like isoform X3
peptidyl-tRNA hydrolase 1 homolog, transcript variant X2
peptidyl-tRNA hydrolase 1 homolog, transcript variant X1
peptidyl-tRNA hydrolase 1 homolog, transcript variant X3
probable peptidyl-tRNA hydrolase isoform X1
probable peptidyl-tRNA hydrolase isoform X3
probable peptidyl-tRNA hydrolase isoform X2
cilia and flagella associated protein 157
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
cilia- and flagella-associated protein 157
procollagen galactosyltransferase 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 31 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
long-chain fatty acid transport protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
potassium sodium-activated channel subfamily T member 1b
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: potassium channel subfamily T member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72% coverage of the annotated genomic feature by RNAseq alignments
calmodulin regulated spectrin-associated protein 1b, transcript variant X2
calmodulin regulated spectrin-associated protein 1b, transcript variant X1
calmodulin-regulated spectrin-associated protein 1-B isoform X2
calmodulin-regulated spectrin-associated protein 1-B isoform X1
UBA domain containing 1, transcript variant X2
UBA domain containing 1, transcript variant X1
ubiquitin-associated domain-containing protein 1 isoform X2
ubiquitin-associated domain-containing protein 1 isoform X1
xenotropic and polytropic retrovirus receptor 1 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
nucleus accumbens-associated protein 2, transcript variant X2
nucleus accumbens-associated protein 2, transcript variant X1
transmembrane protein 250, transcript variant X1
transmembrane protein 250, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
G protein signaling modulator 1b, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
G protein signaling modulator 1b, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
G-protein-signaling modulator 1b isoform X1
G protein signaling modulator 1b, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
G-protein-signaling modulator 1b isoform X2
G protein signaling modulator 1b, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
G protein signaling modulator 1b, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
G-protein-signaling modulator 1b isoform X3
G protein signaling modulator 1b, transcript variant X6
G-protein-signaling modulator 1b isoform X4
G protein signaling modulator 1b, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
G-protein-signaling modulator 1b isoform X5
G protein signaling modulator 1b, transcript variant X8
G-protein-signaling modulator 1b isoform X6
ubiquitin specific peptidase 20, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ubiquitin specific peptidase 20, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ubiquitin specific peptidase 20, transcript variant X9
ubiquitin specific peptidase 20, transcript variant X8
ubiquitin specific peptidase 20, transcript variant X10
ubiquitin specific peptidase 20, transcript variant X6
ubiquitin specific peptidase 20, transcript variant X3
ubiquitin specific peptidase 20, transcript variant X4
ubiquitin specific peptidase 20, transcript variant X2
ubiquitin specific peptidase 20, transcript variant X1
ubiquitin specific peptidase 20, transcript variant X13
ubiquitin carboxyl-terminal hydrolase 20 isoform X2
ubiquitin carboxyl-terminal hydrolase 20 isoform X4
ubiquitin carboxyl-terminal hydrolase 20 isoform X1
ubiquitin carboxyl-terminal hydrolase 20 isoform X3
ubiquitin carboxyl-terminal hydrolase 20 isoform X7
ubiquitin specific peptidase 20, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 20 isoform X6
ubiquitin specific peptidase 20, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ubiquitin carboxyl-terminal hydrolase 20 isoform X5
chromosome 28 C9orf78 homolog, transcript variant X2
telomere length and silencing protein 1 homolog isoform X2
chromosome 28 C9orf78 homolog, transcript variant X1
telomere length and silencing protein 1 homolog isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
solute carrier family 25 member 25b, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
solute carrier family 25 member 25b, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
solute carrier family 25 member 25b, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
calcium-binding mitochondrial carrier protein SCaMC-2-B isoform X1
calcium-binding mitochondrial carrier protein SCaMC-2-B isoform X2
calcium-binding mitochondrial carrier protein SCaMC-2-B isoform X3
dolichyl-phosphate mannosyltransferase subunit 2, regulatory, transcript variant X2
dolichol phosphate-mannose biosynthesis regulatory protein isoform X2
dolichyl-phosphate mannosyltransferase subunit 2, regulatory, transcript variant X1
dolichol phosphate-mannose biosynthesis regulatory protein isoform X1
phosphatidylinositol-4-phosphate 5-kinase-like 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
phosphatidylinositol 4-phosphate 5-kinase-like protein 1
proline rich transmembrane protein 1B, transcript variant X3
proline rich transmembrane protein 1B isoform X3
proline rich transmembrane protein 1B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
proline rich transmembrane protein 1B, transcript variant X1
proline rich transmembrane protein 1B isoform X2
proline rich transmembrane protein 1B isoform X1
protein-O-mannosyltransferase 1, transcript variant X3
protein-O-mannosyltransferase 1, transcript variant X1
protein-O-mannosyltransferase 1, transcript variant X2
protein O-mannosyl-transferase 1 isoform X2
protein O-mannosyl-transferase 1 isoform X1
proline-rich coiled-coil 2B, transcript variant X1
proline-rich coiled-coil 2B, transcript variant X5
proline-rich coiled-coil 2B, transcript variant X2
proline-rich coiled-coil 2B, transcript variant X3
proline-rich coiled-coil 2B, transcript variant X4
COORDINATES: nucleotide motif:Rfam:12.0:RF00153
inactive phospholipid phosphatase 7-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
nuclear pore complex protein Nup214 isoform X2
nuclear pore complex protein Nup214 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 15% coverage of the annotated genomic feature by RNAseq alignments
fibrinogen C domain-containing protein 1-B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
cdkn1a interacting zinc finger protein 1a, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
cdkn1a interacting zinc finger protein 1a, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
cdkn1a interacting zinc finger protein 1a isoform X2
cdkn1a interacting zinc finger protein 1a isoform X1
cdkn1a interacting zinc finger protein 1a, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
cdkn1a interacting zinc finger protein 1a isoform X3
exosome complex component RRP4-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
exosome complex component RRP4-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
exosome complex component RRP4-like isoform X1
exosome complex component RRP4-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
outer dense fiber of sperm tails 2a, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
outer dense fiber of sperm tails 2a, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
mRNA export factor GLE1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
mRNA export factor GLE1-like, transcript variant X1
GLE1 RNA export mediator, transcript variant X1
GLE1 RNA export mediator, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
spectrin alpha, non-erythrocytic 1, transcript variant X1
spectrin alpha, non-erythrocytic 1, transcript variant X5
spectrin alpha, non-erythrocytic 1, transcript variant X4
spectrin alpha, non-erythrocytic 1, transcript variant X6
spectrin alpha, non-erythrocytic 1, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
spectrin alpha, non-erythrocytic 1, transcript variant X8
spectrin alpha, non-erythrocytic 1, transcript variant X2
spectrin alpha, non-erythrocytic 1, transcript variant X3
spectrin alpha chain, non-erythrocytic 1 isoform X1
spectrin alpha chain, non-erythrocytic 1 isoform X3
spectrin alpha chain, non-erythrocytic 1 isoform X2
spectrin alpha chain, non-erythrocytic 1 isoform X4
spectrin alpha chain, non-erythrocytic 1 isoform X5
spectrin alpha chain, non-erythrocytic 1 isoform X6
SET nuclear proto-oncogene b, transcript variant X1
SET nuclear proto-oncogene b, transcript variant X2
SET nuclear proto-oncogene b, transcript variant X3
uncharacterized protein LOC558400 homolog, transcript variant X2
uncharacterized protein LOC558400 homolog, transcript variant X1
uncharacterized protein si:ch211-51h9.7 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 7 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
zyg-11 related, cell cycle regulator, transcript variant X1
zyg-11 related, cell cycle regulator, transcript variant X2
zinc finger DHHC-type palmitoyltransferase 12, transcript variant X1
zinc finger DHHC-type palmitoyltransferase 12, transcript variant X2
palmitoyltransferase ZDHHC12-B isoform X1
palmitoyltransferase ZDHHC12-B isoform X2
serine/threonine-protein kinase N2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
serine/threonine-protein kinase N2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
serine/threonine-protein kinase N2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
serine/threonine-protein kinase N2-like isoform X3
serine/threonine-protein kinase N2-like isoform X1
serine/threonine-protein kinase N2-like isoform X2
general transcription factor IIIC, polypeptide 5
general transcription factor 3C polypeptide 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
SPOUT domain containing methyltransferase 1
putative methyltransferase C9orf114 homolog
bile salt-activated lipase, transcript variant X2
bile salt-activated lipase, transcript variant X1
TSC complex subunit 1b, transcript variant X1
TSC complex subunit 1b, transcript variant X2
TSC complex subunit 1b, transcript variant X4
TSC complex subunit 1b, transcript variant X3
TSC complex subunit 1b, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
growth factor independent 1B transcription repressor, transcript variant X2
growth factor independent 1B transcription repressor, transcript variant X1
growth factor independent 1B transcription repressor, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
immediate early response gene 5-like protein
protein phosphatase 2 phosphatase activator
serine/threonine-protein phosphatase 2A activator
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
N-terminal Xaa-Pro-Lys N-methyltransferase 1, transcript variant X1
N-terminal Xaa-Pro-Lys N-methyltransferase 1, transcript variant X2
N-terminal Xaa-Pro-Lys N-methyltransferase 1 isoform X1
N-terminal Xaa-Pro-Lys N-methyltransferase 1 isoform X2
ankyrin repeat and SOCS box containing 6, transcript variant X1
ankyrin repeat and SOCS box containing 6, transcript variant X2
ankyrin repeat and SOCS box containing 6, transcript variant X3
caspase recruitment domain-containing protein 9-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
small nuclear RNA activating complex, polypeptide 4
snRNA-activating protein complex subunit 4
peptidase, mitochondrial processing subunit alpha
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 8 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
mitochondrial-processing peptidase subunit alpha
protein transport protein Sec16A-like, transcript variant X2
protein transport protein Sec16A-like, transcript variant X1
protein transport protein Sec16A-like isoform X1
protein transport protein Sec16A-like isoform X2
endosome-associated-trafficking regulator 1-like
mitochondrial-processing peptidase subunit alpha-like
phosphatidylinositol polyphosphate 5-phosphatase type IV
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
protein transport protein Sec16A-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
protein transport protein Sec16A-like isoform X3
neurogenic locus notch homolog protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
protein phosphatase 1, regulatory subunit 26, transcript variant X4
protein phosphatase 1, regulatory subunit 26, transcript variant X5
protein phosphatase 1, regulatory subunit 26, transcript variant X1
protein phosphatase 1, regulatory subunit 26, transcript variant X3
protein phosphatase 1, regulatory subunit 26, transcript variant X2
protein phosphatase 1 regulatory subunit 26 isoform X4
protein phosphatase 1 regulatory subunit 26 isoform X5
protein phosphatase 1 regulatory subunit 26 isoform X3
protein phosphatase 1 regulatory subunit 26 isoform X2
protein phosphatase 1 regulatory subunit 26 isoform X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00049
COORDINATES: nucleotide motif:Rfam:12.0:RF00069
mediator complex subunit 22, transcript variant X2
mediator complex subunit 22, transcript variant X1
mediator complex subunit 22, transcript variant X3
mediator of RNA polymerase II transcription subunit 22 isoform X1
mediator of RNA polymerase II transcription subunit 22 isoform X2
mediator of RNA polymerase II transcription subunit 22 isoform X3
solute carrier family 2 member 6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
solute carrier family 2, facilitated glucose transporter member 6 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
solute carrier family 2 member 6, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
solute carrier family 2 member 6, transcript variant X1
solute carrier family 2 member 6, transcript variant X3
solute carrier family 2, facilitated glucose transporter member 6 isoform X1
solute carrier family 2, facilitated glucose transporter member 6 isoform X3
solute carrier family 2, facilitated glucose transporter member 6 isoform X4
calcium channel flower domain containing 1, transcript variant X1
calcium channel flower homolog isoform X1
calcium channel flower domain containing 1, transcript variant X2
calcium channel flower homolog isoform X2
ADAM metallopeptidase with thrombospondin type 1 motif, 13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
A disintegrin and metalloproteinase with thrombospondin motifs 13
serine/threonine kinase-like domain-containing protein STKLD1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments
retinoic acid receptor RXR-alpha-A, transcript variant X2
retinoic acid receptor RXR-alpha-A, transcript variant X3
retinoic acid receptor RXR-alpha-A, transcript variant X1
retinoic acid receptor RXR-alpha-A, transcript variant X4
retinoic acid receptor RXR-alpha-A, transcript variant X5
retinoic acid receptor RXR-alpha-A isoform X2
retinoic acid receptor RXR-alpha-A isoform X1
retinoic acid receptor RXR-alpha-A isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
WD repeat domain 38, transcript variant X1
WD repeat domain 38, transcript variant X2
bromodomain-containing protein 3-like, transcript variant X2
bromodomain-containing protein 3-like, transcript variant X1
bromodomain-containing protein 3-like isoform X1
bromodomain-containing protein 3-like isoform X2
vav 2 guanine nucleotide exchange factor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
vav 2 guanine nucleotide exchange factor, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
vav 2 guanine nucleotide exchange factor, transcript variant X2
vav 2 guanine nucleotide exchange factor, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
vav 2 guanine nucleotide exchange factor, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
guanine nucleotide exchange factor VAV2 isoform X1
guanine nucleotide exchange factor VAV2 isoform X4
guanine nucleotide exchange factor VAV2 isoform X2
guanine nucleotide exchange factor VAV2 isoform X3
guanine nucleotide exchange factor VAV2 isoform X5
sarcosine dehydrogenase, mitochondrial-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: sarcosine dehydrogenase, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC125486353, transcript variant X2
uncharacterized LOC125486353, transcript variant X3
uncharacterized LOC125486353, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
1-acyl-sn-glycerol-3-phosphate acyltransferase beta
divergent protein kinase domain 1B, transcript variant X1
divergent protein kinase domain 1B, transcript variant X3
divergent protein kinase domain 1B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
divergent protein kinase domain 1B isoform X1
divergent protein kinase domain 1B isoform X2
divergent protein kinase domain 1B isoform X3
mitochondrial ribosomal protein S2, transcript variant X2
mitochondrial ribosomal protein S2, transcript variant X1
28S ribosomal protein S2, mitochondrial isoform X2
28S ribosomal protein S2, mitochondrial isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
dopamine beta-hydroxylase (dopamine beta-monooxygenase)
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns