Rhincodon typus isolate 14 chromosome 22, sRhiTyp1.1, whole genome shotgun sequence.
type: Entry
definition: Rhincodon typus isolate 14 chromosome 22, sRhiTyp1.1, whole genome shotgun sequence.
sequence version: NC_063353.1
sequence date: 2022-06-09
sequence: sequence
division: CON
label: NC_063353.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA842712
dblink: SAMN19519256
keyword: WGS
keyword: RefSeq
source: Rhincodon typus (whale shark)
organism: Rhincodon typus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038819.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 50604709
topology: linear
so has quality: SO_0000987
location: 1..50604709
location: region:1-50604709:1
RO_0002162: 259920

NC_063353
type: RefSeq
SIO_000068: refseq

PRJNA842712
type: BioProject
SIO_000068: bioproject

SAMN19519256
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50604709:1
position: 50604709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-50604709:1:source
so part of: sequence
organism: Rhincodon typus
mol type: genomic DNA
isolate: 14
chromosome: 22
sex: male
tissue type: blood
dev stage: adult
collected by: 2018-05-24

259920
type: Taxonomy
SIO_000068: taxonomy

LOC125485806
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11197..50478
location: region:11197-50478:1
so has part: feature:11197-50478:1:exon
subclass of: SO_0000010

125485806
type: Gene
SIO_000068: ncbigene

position:11197:1
position: 11197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50478:1
position: 50478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11197-50478:1:exon

LOC125485806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485806
product: prosaposin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048610549.1
SIO_010081: LOC125485806
subclass of: SO_0000673
so part of: LOC125485806
location: join(11197..11490,38939..39069,45138..45212,50341..50478)
location: region:11197-50478:1
so has part: feature:11197-11490:1:exon
so has part: feature:38939-39069:1:exon
so has part: feature:45138-45212:1:exon
so has part: feature:50341-50478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11197-11490:1:exon

position:11490:1
position: 11490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38939-39069:1:exon

position:38939:1
position: 38939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39069:1
position: 39069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45138-45212:1:exon

position:45138:1
position: 45138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45212:1
position: 45212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50341-50478:1:exon

position:50341:1
position: 50341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125485806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prosaposin-like
translation: MNCMRPDNFWFRFYKLQAELQIIFQRQQRQPECQQEALASFEPKSDYCTQVSNKCENLLTASKCNVLQECVNNEWSQPKVTDSHCEKCMSKMKIISEKMKKSSGEEEMKNVLQEGCETIKDQELKQQCHKFVDSDWHVAVDFIKEDVVCT
SIO_010081: LOC125485806
subclass of: SO_0000673
so part of: LOC125485806
location: join(11382..11490,38939..39069,45138..45212,50341..50478)
location: region:11382-50478:1
so has part: feature:11382-11490:1:exon
so has part: feature:38939-39069:1:exon
so has part: feature:45138-45212:1:exon
so has part: feature:50341-50478:1:exon

XP_048466506.1
type: Protein
SIO_000068: ncbiprotein

position:11382:1
position: 11382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11382-11490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38939-39069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45138-45212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50341-50478:1:exon

cbll1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cbll1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 73200..103151
location: region:73200-103151:1
so has part: feature:73200-103151:1:exon
subclass of: SO_0000010

109921188
type: Gene
SIO_000068: ncbigene

position:73200:1
position: 73200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103151:1
position: 103151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73200-103151:1:exon

cbll1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cbll1
product: Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020521229.2
SIO_010081: cbll1
subclass of: SO_0000673
so part of: cbll1
location: join(73200..73266,73890..74057,79286..79386,79475..79558,88209..88282,101416..103151)
location: region:73200-103151:1
so has part: feature:73200-73266:1:exon
so has part: feature:73890-74057:1:exon
so has part: feature:79286-79386:1:exon
so has part: feature:79475-79558:1:exon
so has part: feature:88209-88282:1:exon
so has part: feature:101416-103151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73200-73266:1:exon

position:73266:1
position: 73266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73890-74057:1:exon

position:73890:1
position: 73890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74057:1
position: 74057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79286-79386:1:exon

position:79286:1
position: 79286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79386:1
position: 79386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:79475-79558:1:exon

position:79475:1
position: 79475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79558:1
position: 79558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88209-88282:1:exon

position:88209:1
position: 88209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88282:1
position: 88282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101416-103151:1:exon

position:101416:1
position: 101416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cbll1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cbll1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Hakai isoform X1
translation: MDQDKDLQGTDGSGCLSGIDVRRRIPIKLISKQSNRNRISSRVQRNMSRNSAKSLTADEEGFDYDDDENYECKAGEVFGSQHRLPVQFFWDFKINLLGEKDDTPIHFCDKCGLPIKIYGRMIPCKHVFCFTCASLQEKKGDKMCPGCSDPVQRIEQCLRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRTGKAVIRSQPEPLHPAMAPPAEIAERFLMPQDKHHISHLPPKQHAILMPPPPLQHVSHDHYSQTHEDIRPPPTEMPLPPPPRSVSQETFRISTVTTRKHSNLITVPIQDDSSSTGSREPPTAAPHHHPEYQNNPVVSHPHHMLPPQQHYAPPPPPPPPISHPMPHPAQAAANPHMVYNQAPPPPLSAAPPPINPPPGHILAPMPPYLNHPPHGPPPPQHTGPPVNTPPPPHHYSASTIPQYSEDQGTLSPPFTQPGGHSPGIGVWPAPRGPPPPRIQVPPPQAPLPGPHHPDQTRYRPYYQ
SIO_010081: cbll1
subclass of: SO_0000673
so part of: cbll1
location: join(73257..73266,73890..74057,79286..79386,79475..79558,88209..88282,101416..102457)
location: region:73257-102457:1
so has part: feature:73257-73266:1:exon
so has part: feature:73890-74057:1:exon
so has part: feature:79286-79386:1:exon
so has part: feature:79475-79558:1:exon
so has part: feature:88209-88282:1:exon
so has part: feature:101416-102457:1:exon

XP_020376818.1
type: Protein
SIO_000068: ncbiprotein

position:73257:1
position: 73257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102457:1
position: 102457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73257-73266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73890-74057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79286-79386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79475-79558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88209-88282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101416-102457:1:exon

cbll1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cbll1
product: Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610264.1
SIO_010081: cbll1
subclass of: SO_0000673
so part of: cbll1
location: join(73288..73466,73890..74057,79286..79386,79475..79558,88209..88282,101416..103151)
location: region:73288-103151:1
so has part: feature:73288-73466:1:exon
so has part: feature:73890-74057:1:exon
so has part: feature:79286-79386:1:exon
so has part: feature:79475-79558:1:exon
so has part: feature:88209-88282:1:exon
so has part: feature:101416-103151:1:exon

position:73288:1
position: 73288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73288-73466:1:exon

position:73466:1
position: 73466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73890-74057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79286-79386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79475-79558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88209-88282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101416-103151:1:exon

cbll1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cbll1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Hakai isoform X2
translation: MSRNSAKSLTADEEGFDYDDDENYECKAGEVFGSQHRLPVQFFWDFKINLLGEKDDTPIHFCDKCGLPIKIYGRMIPCKHVFCFTCASLQEKKGDKMCPGCSDPVQRIEQCLRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRTGKAVIRSQPEPLHPAMAPPAEIAERFLMPQDKHHISHLPPKQHAILMPPPPLQHVSHDHYSQTHEDIRPPPTEMPLPPPPRSVSQETFRISTVTTRKHSNLITVPIQDDSSSTGSREPPTAAPHHHPEYQNNPVVSHPHHMLPPQQHYAPPPPPPPPISHPMPHPAQAAANPHMVYNQAPPPPLSAAPPPINPPPGHILAPMPPYLNHPPHGPPPPQHTGPPVNTPPPPHHYSASTIPQYSEDQGTLSPPFTQPGGHSPGIGVWPAPRGPPPPRIQVPPPQAPLPGPHHPDQTRYRPYYQ
SIO_010081: cbll1
subclass of: SO_0000673
so part of: cbll1
location: join(74018..74057,79286..79386,79475..79558,88209..88282,101416..102457)
location: region:74018-102457:1
so has part: feature:74018-74057:1:exon
so has part: feature:79286-79386:1:exon
so has part: feature:79475-79558:1:exon
so has part: feature:88209-88282:1:exon
so has part: feature:101416-102457:1:exon

XP_048466221.1
type: Protein
SIO_000068: ncbiprotein

position:74018:1
position: 74018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74018-74057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79286-79386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79475-79558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88209-88282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101416-102457:1:exon

LOC109923835
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(132057..193178)
location: region:132057-193178:-1
so has part: feature:132057-193178:-1:exon
subclass of: SO_0000010

109923835
type: Gene
SIO_000068: ncbigene

position:132057:-1
position: 132057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193178:-1
position: 193178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132057-193178:-1:exon

LOC109923835
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923835
product: chloride anion exchanger-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610265.1
SIO_010081: LOC109923835
subclass of: SO_0000673
so part of: LOC109923835
location: complement(join(132057..132315,132401..132457,133983..134128,137617..137671,142695..142931,144695..144790,145073..145165,145254..145323,153850..153956,154980..155075,156382..156459,160155..160268,165133..165280,168549..168631,171305..171457,171650..171814,171902..172065,172165..172275,181248..181387,182684..182886,193119..193178))
location: region:132057-193178:-1
so has part: feature:193119-193178:-1:exon
so has part: feature:182684-182886:-1:exon
so has part: feature:181248-181387:-1:exon
so has part: feature:172165-172275:-1:exon
so has part: feature:171902-172065:-1:exon
so has part: feature:171650-171814:-1:exon
so has part: feature:171305-171457:-1:exon
so has part: feature:168549-168631:-1:exon
so has part: feature:165133-165280:-1:exon
so has part: feature:160155-160268:-1:exon
so has part: feature:156382-156459:-1:exon
so has part: feature:154980-155075:-1:exon
so has part: feature:153850-153956:-1:exon
so has part: feature:145254-145323:-1:exon
so has part: feature:145073-145165:-1:exon
so has part: feature:144695-144790:-1:exon
so has part: feature:142695-142931:-1:exon
so has part: feature:137617-137671:-1:exon
so has part: feature:133983-134128:-1:exon
so has part: feature:132401-132457:-1:exon
so has part: feature:132057-132315:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193119-193178:-1:exon

position:193119:-1
position: 193119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182684-182886:-1:exon

position:182684:-1
position: 182684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182886:-1
position: 182886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181248-181387:-1:exon

position:181248:-1
position: 181248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181387:-1
position: 181387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172165-172275:-1:exon

position:172165:-1
position: 172165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172275:-1
position: 172275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171902-172065:-1:exon

position:171902:-1
position: 171902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172065:-1
position: 172065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171650-171814:-1:exon

position:171650:-1
position: 171650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171814:-1
position: 171814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:171305-171457:-1:exon

position:171305:-1
position: 171305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171457:-1
position: 171457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:168549-168631:-1:exon

position:168549:-1
position: 168549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168631:-1
position: 168631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:165133-165280:-1:exon

position:165133:-1
position: 165133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165280:-1
position: 165280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:160155-160268:-1:exon

position:160155:-1
position: 160155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160268:-1
position: 160268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:156382-156459:-1:exon

position:156382:-1
position: 156382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156459:-1
position: 156459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:154980-155075:-1:exon

position:154980:-1
position: 154980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155075:-1
position: 155075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:153850-153956:-1:exon

position:153850:-1
position: 153850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153956:-1
position: 153956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:145254-145323:-1:exon

position:145254:-1
position: 145254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145323:-1
position: 145323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:145073-145165:-1:exon

position:145073:-1
position: 145073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145165:-1
position: 145165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:144695-144790:-1:exon

position:144695:-1
position: 144695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144790:-1
position: 144790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:142695-142931:-1:exon

position:142695:-1
position: 142695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142931:-1
position: 142931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:137617-137671:-1:exon

position:137617:-1
position: 137617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137671:-1
position: 137671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:133983-134128:-1:exon

position:133983:-1
position: 133983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134128:-1
position: 134128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:132401-132457:-1:exon

position:132401:-1
position: 132401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132457:-1
position: 132457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:132057-132315:-1:exon

position:132315:-1
position: 132315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109923835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride anion exchanger-like
translation: MLSGNQHYIVARPAYSEVSFKEDHQQVERYHKTTWDNIRIYFRCSTAKAKKVFYTFLPIASWLPGYNVKEWLPSDLVSGVSTGLVSVLQGLAFALLVNVPAGYGLYSAFFPVLTYCILGTSKHLSVGPFPVLSLMVGTVVNRLVADGNTAVNSTLFPADMSLEDRQVWVASSVTLLAGIFQLVLGLLQVGFIVIYLSDPMISGFTTAAAIHVLISQLKFVLQLNVPGFNGPLSVIYTLEYIINHITETNVPDVVISLIIMVVVFIVKEINDRFKSKLPVPIPIEVIMTIIATGVSYAFNFNEKYNVDIIGNLTSGYQSPLTPNVGVLQQSAGDAFSIAIVGFAVAFSVAKVYAIKHDYVLDGNQELVAFGISNMFCGAFRGFAGSTALSRTAVQESTGGKTQLASLISAVMVMIVTLAIGFLLAPLPKSVLGALVIINLKGMLMQFREIEILWKKDKFDCLVWIMAFIAAVLLGLDIGLAAGVGFELLTVVFRTQFPQCSVLANISGTDIYKNRKDYLNIYEPEGVKIFRCPSPIFFANVDFLRSKLVEAIGFNPLRILRKRNKALLKIKKMLRKGELALTSKGYIQTAERSGDSDSENEDNNMIEELDKATDMRGLPMRIDWKSPLPTGLCVPSVEIHSIVLDFAAVSFLDVSAMKGLKSILKEFVRIEIDVYVAACGDLILEKLSRCGFFDDEISPKIFFLTIHDAMLCILDKHHPTNSVNIICDKVNNIKETSSEGDLKKRNCGVQSESHF
SIO_010081: LOC109923835
subclass of: SO_0000673
so part of: LOC109923835
location: complement(join(132292..132315,132401..132457,133983..134128,137617..137671,142695..142931,144695..144790,145073..145165,145254..145323,153850..153956,154980..155075,156382..156459,160155..160268,165133..165280,168549..168631,171305..171457,171650..171814,171902..172065,172165..172275,181248..181387,182684..182811))
location: region:132292-182811:-1
so has part: feature:182684-182811:-1:exon
so has part: feature:181248-181387:-1:exon
so has part: feature:172165-172275:-1:exon
so has part: feature:171902-172065:-1:exon
so has part: feature:171650-171814:-1:exon
so has part: feature:171305-171457:-1:exon
so has part: feature:168549-168631:-1:exon
so has part: feature:165133-165280:-1:exon
so has part: feature:160155-160268:-1:exon
so has part: feature:156382-156459:-1:exon
so has part: feature:154980-155075:-1:exon
so has part: feature:153850-153956:-1:exon
so has part: feature:145254-145323:-1:exon
so has part: feature:145073-145165:-1:exon
so has part: feature:144695-144790:-1:exon
so has part: feature:142695-142931:-1:exon
so has part: feature:137617-137671:-1:exon
so has part: feature:133983-134128:-1:exon
so has part: feature:132401-132457:-1:exon
so has part: feature:132292-132315:-1:exon

XP_048466222.1
type: Protein
SIO_000068: ncbiprotein

position:132292:-1
position: 132292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182811:-1
position: 182811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182684-182811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181248-181387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172165-172275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171902-172065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171650-171814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171305-171457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168549-168631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165133-165280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160155-160268:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156382-156459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154980-155075:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153850-153956:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145254-145323:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145073-145165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144695-144790:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:142695-142931:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137617-137671:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:133983-134128:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:132401-132457:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:132292-132315:-1:exon

dldh
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: dldh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 262796..291958
location: region:262796-291958:1
so has part: feature:262796-291958:1:exon
subclass of: SO_0000010

109921067
type: Gene
SIO_000068: ncbigene

position:262796:1
position: 262796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291958:1
position: 291958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262796-291958:1:exon

dldh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dldh
product: dihydrolipoamide dehydrogenase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610317.1
SIO_010081: dldh
subclass of: SO_0000673
so part of: dldh
location: join(262796..262920,263686..263758,269358..269437,272993..273061,273203..273272,275580..275680,279058..279201,279530..279631,280851..281041,281185..281355,286787..286976,289691..289828,289908..289997,291714..291958)
location: region:262796-291958:1
so has part: feature:262796-262920:1:exon
so has part: feature:263686-263758:1:exon
so has part: feature:269358-269437:1:exon
so has part: feature:272993-273061:1:exon
so has part: feature:273203-273272:1:exon
so has part: feature:275580-275680:1:exon
so has part: feature:279058-279201:1:exon
so has part: feature:279530-279631:1:exon
so has part: feature:280851-281041:1:exon
so has part: feature:281185-281355:1:exon
so has part: feature:286787-286976:1:exon
so has part: feature:289691-289828:1:exon
so has part: feature:289908-289997:1:exon
so has part: feature:291714-291958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:262796-262920:1:exon

position:262920:1
position: 262920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263686-263758:1:exon

position:263686:1
position: 263686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263758:1
position: 263758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269358-269437:1:exon

position:269358:1
position: 269358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269437:1
position: 269437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272993-273061:1:exon

position:272993:1
position: 272993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273061:1
position: 273061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273203-273272:1:exon

position:273203:1
position: 273203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273272:1
position: 273272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:275580-275680:1:exon

position:275580:1
position: 275580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275680:1
position: 275680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:279058-279201:1:exon

position:279058:1
position: 279058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279201:1
position: 279201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:279530-279631:1:exon

position:279530:1
position: 279530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279631:1
position: 279631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:280851-281041:1:exon

position:280851:1
position: 280851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281041:1
position: 281041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:281185-281355:1:exon

position:281185:1
position: 281185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281355:1
position: 281355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:286787-286976:1:exon

position:286787:1
position: 286787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286976:1
position: 286976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:289691-289828:1:exon

position:289691:1
position: 289691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289828:1
position: 289828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:289908-289997:1:exon

position:289908:1
position: 289908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289997:1
position: 289997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:291714-291958:1:exon

position:291714:1
position: 291714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dldh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dldh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydrolipoyl dehydrogenase, mitochondrial
translation: MRIWSLMFRQLLKTGHARHRLQGLSAVRLRTYADVAPVDADVTVVGSGPGGYVAAIKAAQLGFKTVCVEKNDTLGGTCLNVGCIPSKALLNNSYLYHLAHGKDFASRGIEITGMNLNLEKMMEQKSNAVKSLTGGIAHLFKQNKVTHVQGHGKITGKHQVTAYCSDGSVQIINSKNILIATGSEVTPFPGIQIDEETIVSSTGALSLKQVPEKLVVIGAGVIGVELGSVWQRLGSEVTAIEFLGHVGGIGIDMEIAKNFQRILQKQGLKFKLNTKVTSATKRPDRKIDVSFEAAAGGKADTITCDVLLVSIGRRPYTENLGLQDMGIEVDKKGRIPVNNRFQTKIPNIFAIGDVIAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCIPSVVYTHPEVAWVGKSEEQLKEEGIPYKTGKFPFAANSRAKTNNDTDGLVKILSHKETDRMLGAHILGSGAGEMINEATLAMEYGASCEDVARVCHAHPTVSEAFREANIAASFGKAINF
SIO_010081: dldh
subclass of: SO_0000673
so part of: dldh
location: join(262882..262920,263686..263758,269358..269437,272993..273061,273203..273272,275580..275680,279058..279201,279530..279631,280851..281041,281185..281355,286787..286976,289691..289828,289908..289997,291714..291779)
location: region:262882-291779:1
so has part: feature:262882-262920:1:exon
so has part: feature:263686-263758:1:exon
so has part: feature:269358-269437:1:exon
so has part: feature:272993-273061:1:exon
so has part: feature:273203-273272:1:exon
so has part: feature:275580-275680:1:exon
so has part: feature:279058-279201:1:exon
so has part: feature:279530-279631:1:exon
so has part: feature:280851-281041:1:exon
so has part: feature:281185-281355:1:exon
so has part: feature:286787-286976:1:exon
so has part: feature:289691-289828:1:exon
so has part: feature:289908-289997:1:exon
so has part: feature:291714-291779:1:exon

XP_048466274.1
type: Protein
SIO_000068: ncbiprotein

position:262882:1
position: 262882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291779:1
position: 291779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262882-262920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263686-263758:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269358-269437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272993-273061:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273203-273272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275580-275680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279058-279201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279530-279631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280851-281041:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281185-281355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286787-286976:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289691-289828:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:289908-289997:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:291714-291779:1:exon

nopchap1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: nopchap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300101..307160
location: region:300101-307160:1
so has part: feature:300101-307160:1:exon
subclass of: SO_0000010

109921811
type: Gene
SIO_000068: ncbigene

position:300101:1
position: 300101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307160:1
position: 307160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300101-307160:1:exon

nopchap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nopchap1
product: NOP protein chaperone 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020521858.2
SIO_010081: nopchap1
subclass of: SO_0000673
so part of: nopchap1
location: join(300101..300297,300385..300468,301115..301251,304955..307160)
location: region:300101-307160:1
so has part: feature:300101-300297:1:exon
so has part: feature:300385-300468:1:exon
so has part: feature:301115-301251:1:exon
so has part: feature:304955-307160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300101-300297:1:exon

position:300297:1
position: 300297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300385-300468:1:exon

position:300385:1
position: 300385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300468:1
position: 300468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301115-301251:1:exon

position:301115:1
position: 301115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301251:1
position: 301251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:304955-307160:1:exon

position:304955:1
position: 304955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nopchap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nopchap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C12orf45 homolog
translation: MMAAEGNGLSPNRSKDLLRAESGLGFRQSLVVDPAHSRSLTRPQIVRVGRSSVLDRLQNFLPKMARANQELLKQMEISKPGHFDIENIEDCPDKVIEMNVSLFEMNGSDESGDEKLTPEDEDSQCECDLFGEVTEANLKLHRTQKQEKCRIEVLSSDGTH
SIO_010081: nopchap1
subclass of: SO_0000673
so part of: nopchap1
location: join(300225..300297,300385..300468,301115..301251,304955..305143)
location: region:300225-305143:1
so has part: feature:300225-300297:1:exon
so has part: feature:300385-300468:1:exon
so has part: feature:301115-301251:1:exon
so has part: feature:304955-305143:1:exon

XP_020377447.1
type: Protein
SIO_000068: ncbiprotein

position:300225:1
position: 300225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305143:1
position: 305143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300225-300297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300385-300468:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301115-301251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304955-305143:1:exon

aldh1l2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: aldh1l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(310521..414508)
location: region:310521-414508:-1
so has part: feature:310521-414508:-1:exon
subclass of: SO_0000010

109921813
type: Gene
SIO_000068: ncbigene

position:310521:-1
position: 310521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414508:-1
position: 414508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310521-414508:-1:exon

aldh1l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: aldh1l2
product: aldehyde dehydrogenase 1 family, member L2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610072.1
SIO_010081: aldh1l2
subclass of: SO_0000673
so part of: aldh1l2
location: complement(join(310521..313018,317326..317525,323265..323370,326843..327008,327118..327216,327354..327453,329251..329344,333721..333808,341383..341488,341596..341666,350055..350205,352806..352933,353128..353247,353580..353727,353914..354005,358843..358968,360079..360213,374930..375019,384398..384499,387423..387588,409219..409453,413426..413570,414355..414508))
location: region:310521-414508:-1
so has part: feature:414355-414508:-1:exon
so has part: feature:413426-413570:-1:exon
so has part: feature:409219-409453:-1:exon
so has part: feature:387423-387588:-1:exon
so has part: feature:384398-384499:-1:exon
so has part: feature:374930-375019:-1:exon
so has part: feature:360079-360213:-1:exon
so has part: feature:358843-358968:-1:exon
so has part: feature:353914-354005:-1:exon
so has part: feature:353580-353727:-1:exon
so has part: feature:353128-353247:-1:exon
so has part: feature:352806-352933:-1:exon
so has part: feature:350055-350205:-1:exon
so has part: feature:341596-341666:-1:exon
so has part: feature:341383-341488:-1:exon
so has part: feature:333721-333808:-1:exon
so has part: feature:329251-329344:-1:exon
so has part: feature:327354-327453:-1:exon
so has part: feature:327118-327216:-1:exon
so has part: feature:326843-327008:-1:exon
so has part: feature:323265-323370:-1:exon
so has part: feature:317326-317525:-1:exon
so has part: feature:310521-313018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414355-414508:-1:exon

position:414355:-1
position: 414355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413426-413570:-1:exon

position:413426:-1
position: 413426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413570:-1
position: 413570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:409219-409453:-1:exon

position:409219:-1
position: 409219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409453:-1
position: 409453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:387423-387588:-1:exon

position:387423:-1
position: 387423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387588:-1
position: 387588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:384398-384499:-1:exon

position:384398:-1
position: 384398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384499:-1
position: 384499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:374930-375019:-1:exon

position:374930:-1
position: 374930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375019:-1
position: 375019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:360079-360213:-1:exon

position:360079:-1
position: 360079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360213:-1
position: 360213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:358843-358968:-1:exon

position:358843:-1
position: 358843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358968:-1
position: 358968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:353914-354005:-1:exon

position:353914:-1
position: 353914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354005:-1
position: 354005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:353580-353727:-1:exon

position:353580:-1
position: 353580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353727:-1
position: 353727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:353128-353247:-1:exon

position:353128:-1
position: 353128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353247:-1
position: 353247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:352806-352933:-1:exon

position:352806:-1
position: 352806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352933:-1
position: 352933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:350055-350205:-1:exon

position:350055:-1
position: 350055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350205:-1
position: 350205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:341596-341666:-1:exon

position:341596:-1
position: 341596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341666:-1
position: 341666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:341383-341488:-1:exon

position:341383:-1
position: 341383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341488:-1
position: 341488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:333721-333808:-1:exon

position:333721:-1
position: 333721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333808:-1
position: 333808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:329251-329344:-1:exon

position:329251:-1
position: 329251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329344:-1
position: 329344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:327354-327453:-1:exon

position:327354:-1
position: 327354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327453:-1
position: 327453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:327118-327216:-1:exon

position:327118:-1
position: 327118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327216:-1
position: 327216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:326843-327008:-1:exon

position:326843:-1
position: 326843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327008:-1
position: 327008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:323265-323370:-1:exon

position:323265:-1
position: 323265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323370:-1
position: 323370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:317326-317525:-1:exon

position:317326:-1
position: 317326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317525:-1
position: 317525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:310521-313018:-1:exon

position:313018:-1
position: 313018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

aldh1l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: aldh1l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 10-formyltetrahydrofolate dehydrogenase
translation: MLWAAGRAVRRFSTAASCYQNKLNVALIGQSLFGQEVYTNLQKQGHKVVGVFTVPDRDGKADPLAVAAEKDGTPVFKFPKWRLKGKPIADVVEAYKSVGAELNVLPFCSQFIPMDVINHPRHGSIIYHPSLLPRHRGAAAINWTLIHGDKIGGFSIFWADDGLDTGPILLQRQCDIDPNDTVDSLYNRFLYPEGIAAMVEAVQLIAEGKAPRITQPEEGATYEGIQRKENAKISWDQPAEAIHNWIRGHDKIPGAWTLLDGQAITLYGSSMYKGAVPSGQPLEISGASKPGLVTSNGLVLFGNDGNMLVVRNLQFEDGKMIPASKYFSSGETVTVELTEEEKKVAENIKAIWKSILSNVDTIEDTTDFFKSGAASMDVVRLVEEIKQKCKGLQLQNEDVYMATKFEDFIQMIVRKLRGEDKEEELEVDYVTMDVNDMTVKMPHQCFIDGRFTNAEEGKTYNTINPTNGSVICEVSYSSVADVDRAVAAAKDAFENGQWGKMNARDRGRLLYQLADLMQEHQEELATIEAIDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTYTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELAARAGIPKGVINILPGSGGLVGQRLSEHPDVRKLGFTGSTPIGKQIMKSCAVSNLKKVSLELGGKSPLIIFNDCDLDKAVRMGMGAVYFNKGENCIAAGRLFVEESVHDEFVRRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLEYCEIGVKEGATLVYGGKSILQPGFFMEPTVFTDVEDDMLIAKEESFGPVMVISKFRDGDVDGVLHRANNTEFGLASGVFTQDIGKAMYVSDGLDAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEEALHEYLRTKAVTVEY
SIO_010081: aldh1l2
subclass of: SO_0000673
so part of: aldh1l2
location: complement(join(312963..313018,317326..317525,323265..323370,326843..327008,327118..327216,327354..327453,329251..329344,333721..333808,341383..341488,341596..341666,350055..350205,352806..352933,353128..353247,353580..353727,353914..354005,358843..358968,360079..360213,374930..375019,384398..384499,387423..387588,409219..409453,413426..413570,414355..414402))
location: region:312963-414402:-1
so has part: feature:414355-414402:-1:exon
so has part: feature:413426-413570:-1:exon
so has part: feature:409219-409453:-1:exon
so has part: feature:387423-387588:-1:exon
so has part: feature:384398-384499:-1:exon
so has part: feature:374930-375019:-1:exon
so has part: feature:360079-360213:-1:exon
so has part: feature:358843-358968:-1:exon
so has part: feature:353914-354005:-1:exon
so has part: feature:353580-353727:-1:exon
so has part: feature:353128-353247:-1:exon
so has part: feature:352806-352933:-1:exon
so has part: feature:350055-350205:-1:exon
so has part: feature:341596-341666:-1:exon
so has part: feature:341383-341488:-1:exon
so has part: feature:333721-333808:-1:exon
so has part: feature:329251-329344:-1:exon
so has part: feature:327354-327453:-1:exon
so has part: feature:327118-327216:-1:exon
so has part: feature:326843-327008:-1:exon
so has part: feature:323265-323370:-1:exon
so has part: feature:317326-317525:-1:exon
so has part: feature:312963-313018:-1:exon

XP_048466029.1
type: Protein
SIO_000068: ncbiprotein

position:312963:-1
position: 312963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414402:-1
position: 414402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414355-414402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413426-413570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:409219-409453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387423-387588:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384398-384499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374930-375019:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360079-360213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:358843-358968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353914-354005:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353580-353727:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353128-353247:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:352806-352933:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:350055-350205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341596-341666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341383-341488:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:333721-333808:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:329251-329344:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:327354-327453:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:327118-327216:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:326843-327008:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:323265-323370:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:317326-317525:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:312963-313018:-1:exon

LOC125485798
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(452771..471559)
location: region:452771-471559:-1
so has part: feature:452771-471559:-1:exon
subclass of: SO_0000010

125485798
type: Gene
SIO_000068: ncbigene

position:452771:-1
position: 452771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471559:-1
position: 471559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452771-471559:-1:exon

LOC125485798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485798
product: WASH complex subunit 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_048610521.1
SIO_010081: LOC125485798
subclass of: SO_0000673
so part of: LOC125485798
location: complement(join(452771..452939,459706..459751,459914..459979,461304..461357,468356..468495,471427..471559))
location: region:452771-471559:-1
so has part: feature:471427-471559:-1:exon
so has part: feature:468356-468495:-1:exon
so has part: feature:461304-461357:-1:exon
so has part: feature:459914-459979:-1:exon
so has part: feature:459706-459751:-1:exon
so has part: feature:452771-452939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471427-471559:-1:exon

position:471427:-1
position: 471427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:468356-468495:-1:exon

position:468356:-1
position: 468356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468495:-1
position: 468495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:461304-461357:-1:exon

position:461304:-1
position: 461304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461357:-1
position: 461357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459914-459979:-1:exon

position:459914:-1
position: 459914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459979:-1
position: 459979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:459706-459751:-1:exon

position:459706:-1
position: 459706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459751:-1
position: 459751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:452771-452939:-1:exon

position:452939:-1
position: 452939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125485798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 4-like
translation: MALDVQARDWQFDRFDEGSQRIHAEVQLKNYGRFLEEYTNQLKGIEDALDDSVGDVWDFTLDPIALKLLPYEQSSLLELIKTENKVLNKVITVYAALCCEVKKLKYEAETKFYNGLLFYGEGVTDSCMVEGESQIQMGRFISFLQVCCLF
SIO_010081: LOC125485798
subclass of: SO_0000673
so part of: LOC125485798
location: complement(join(452854..452939,459706..459751,459914..459979,461304..461357,468356..468495,471427..471487))
location: region:452854-471487:-1
so has part: feature:471427-471487:-1:exon
so has part: feature:468356-468495:-1:exon
so has part: feature:461304-461357:-1:exon
so has part: feature:459914-459979:-1:exon
so has part: feature:459706-459751:-1:exon
so has part: feature:452854-452939:-1:exon

XP_048466478.1
type: Protein
SIO_000068: ncbiprotein

position:452854:-1
position: 452854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471487:-1
position: 471487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471427-471487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:468356-468495:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461304-461357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459914-459979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459706-459751:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:452854-452939:-1:exon

washc4
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: washc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(479900..522949)
location: region:479900-522949:-1
so has part: feature:479900-522949:-1:exon
subclass of: SO_0000010

109911682
type: Gene
SIO_000068: ncbigene

position:479900:-1
position: 479900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522949:-1
position: 522949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479900-522949:-1:exon

washc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: washc4
product: WASH complex subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_020511043.2
SIO_010081: washc4
subclass of: SO_0000673
so part of: washc4
location: complement(join(479900..480040,480140..480214,480462..480616,480719..480887,482491..482607,487575..487680,487767..487846,489575..489721,490476..490583,500996..501121,503035..503161,507700..507860,507957..508084,515413..515536,515773..515893,516842..516945,518132..518174,522630..522949))
location: region:479900-522949:-1
so has part: feature:522630-522949:-1:exon
so has part: feature:518132-518174:-1:exon
so has part: feature:516842-516945:-1:exon
so has part: feature:515773-515893:-1:exon
so has part: feature:515413-515536:-1:exon
so has part: feature:507957-508084:-1:exon
so has part: feature:507700-507860:-1:exon
so has part: feature:503035-503161:-1:exon
so has part: feature:500996-501121:-1:exon
so has part: feature:490476-490583:-1:exon
so has part: feature:489575-489721:-1:exon
so has part: feature:487767-487846:-1:exon
so has part: feature:487575-487680:-1:exon
so has part: feature:482491-482607:-1:exon
so has part: feature:480719-480887:-1:exon
so has part: feature:480462-480616:-1:exon
so has part: feature:480140-480214:-1:exon
so has part: feature:479900-480040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522630-522949:-1:exon

position:522630:-1
position: 522630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518132-518174:-1:exon

position:518132:-1
position: 518132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518174:-1
position: 518174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516842-516945:-1:exon

position:516842:-1
position: 516842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516945:-1
position: 516945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:515773-515893:-1:exon

position:515773:-1
position: 515773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515893:-1
position: 515893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:515413-515536:-1:exon

position:515413:-1
position: 515413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515536:-1
position: 515536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:507957-508084:-1:exon

position:507957:-1
position: 507957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508084:-1
position: 508084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:507700-507860:-1:exon

position:507700:-1
position: 507700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507860:-1
position: 507860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503035-503161:-1:exon

position:503035:-1
position: 503035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503161:-1
position: 503161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:500996-501121:-1:exon

position:500996:-1
position: 500996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501121:-1
position: 501121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:490476-490583:-1:exon

position:490476:-1
position: 490476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490583:-1
position: 490583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:489575-489721:-1:exon

position:489575:-1
position: 489575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489721:-1
position: 489721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:487767-487846:-1:exon

position:487767:-1
position: 487767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487846:-1
position: 487846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:487575-487680:-1:exon

position:487575:-1
position: 487575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487680:-1
position: 487680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:482491-482607:-1:exon

position:482491:-1
position: 482491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482607:-1
position: 482607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:480719-480887:-1:exon

position:480719:-1
position: 480719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480887:-1
position: 480887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:480462-480616:-1:exon

position:480462:-1
position: 480462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480616:-1
position: 480616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:480140-480214:-1:exon

position:480140:-1
position: 480140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480214:-1
position: 480214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:479900-480040:-1:exon

position:480040:-1
position: 480040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

washc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: washc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 4
translation: MNIVQQLASLYTSNKNAPKVMETTGVHFQIVYEHLGELLAVLLILDEIIGNHVTLKDHWIMYKRLLKSVHHNPSKFGIAEEKLKPFEKLLLKLEGQLLDGMIFQACVEQQFDTRNEPTSVSKNSTFAEEFAHNIRTIFTNAESKLGEPSEIDQRDKYVGVCTLFVLHFQIFRTLDKKLYKSLMDVCKKVPAITLTANIIWFADQFLLDKMAPAAKIVEKKNLQSIKSQRETFLQQKAQTLSKDVQSYYLFVSSWMMKMESILSKVQSVEKFAEHLSNRCSIFIQGILYANSLSNIIRTTMNLYMSMQKPMTKTSVKALCRLVELLKAIEHTVHRRTMVIADSVCHIAQYLQHQALNSISVAKKRVISERKYSERRLDVLSALVLAENALNGPSTKERKLVVALALSVGTQMKTFRDEELLVLQIVLKKLDLISELRERIQILCNCNFLYWHRTIFPIYLDDVYDNAVDSARVHYMFSALRDCVPPMMHARHLESTQVLLESFDKEIMDVLNEHLLDKLCKEIEKDLRLSVHTHLKLDDRNPFKVGIKDLTDFFSIKPIRFFNRFIDVKAYVTHYLDKTFYNLTTVAIHDWATYSEMRNLATQRYSLSMTEAHLPSQTLEQGLDVLEIMRNIHVFVSKYLYNLNNQIFIERTSNNKHLNTINIRHVANSIRTHGTGIMNTTVSALVLNWMNC
SIO_010081: washc4
subclass of: SO_0000673
so part of: washc4
location: complement(join(479900..480040,480140..480214,480462..480616,480719..480887,482491..482607,487575..487680,487767..487846,489575..489721,490476..490583,500996..501121,503035..503161,507700..507860,507957..508084,515413..515536,515773..515893,516842..516945,518132..518174,522630..522673))
location: region:479900-522673:-1
so has part: feature:522630-522673:-1:exon
so has part: feature:518132-518174:-1:exon
so has part: feature:516842-516945:-1:exon
so has part: feature:515773-515893:-1:exon
so has part: feature:515413-515536:-1:exon
so has part: feature:507957-508084:-1:exon
so has part: feature:507700-507860:-1:exon
so has part: feature:503035-503161:-1:exon
so has part: feature:500996-501121:-1:exon
so has part: feature:490476-490583:-1:exon
so has part: feature:489575-489721:-1:exon
so has part: feature:487767-487846:-1:exon
so has part: feature:487575-487680:-1:exon
so has part: feature:482491-482607:-1:exon
so has part: feature:480719-480887:-1:exon
so has part: feature:480462-480616:-1:exon
so has part: feature:480140-480214:-1:exon
so has part: feature:479900-480040:-1:exon

XP_020366632.2
type: Protein
SIO_000068: ncbiprotein

position:522673:-1
position: 522673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522630-522673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518132-518174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516842-516945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:515773-515893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:515413-515536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507957-508084:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507700-507860:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503035-503161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500996-501121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:490476-490583:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489575-489721:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:487767-487846:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:487575-487680:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:482491-482607:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:480719-480887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:480462-480616:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:480140-480214:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:479900-480040:-1:exon

LOC125485808
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(530651..549129)
location: region:530651-549129:-1
so has part: feature:530651-549129:-1:exon
subclass of: SO_0000010

125485808
type: Gene
SIO_000068: ncbigene

position:530651:-1
position: 530651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549129:-1
position: 549129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530651-549129:-1:exon

LOC125485808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485808
product: WASH complex subunit 4-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610550.1
SIO_010081: LOC125485808
subclass of: SO_0000673
so part of: LOC125485808
location: complement(join(530651..531774,534105..534204,535469..535665,538758..538854,540420..540567,542035..542121,542207..542273,547195..547303,547890..548024,549103..549129))
location: region:530651-549129:-1
so has part: feature:549103-549129:-1:exon
so has part: feature:547890-548024:-1:exon
so has part: feature:547195-547303:-1:exon
so has part: feature:542207-542273:-1:exon
so has part: feature:542035-542121:-1:exon
so has part: feature:540420-540567:-1:exon
so has part: feature:538758-538854:-1:exon
so has part: feature:535469-535665:-1:exon
so has part: feature:534105-534204:-1:exon
so has part: feature:530651-531774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549103-549129:-1:exon

position:549103:-1
position: 549103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547890-548024:-1:exon

position:547890:-1
position: 547890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548024:-1
position: 548024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547195-547303:-1:exon

position:547195:-1
position: 547195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547303:-1
position: 547303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542207-542273:-1:exon

position:542207:-1
position: 542207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542273:-1
position: 542273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542035-542121:-1:exon

position:542035:-1
position: 542035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542121:-1
position: 542121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:540420-540567:-1:exon

position:540420:-1
position: 540420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540567:-1
position: 540567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:538758-538854:-1:exon

position:538758:-1
position: 538758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538854:-1
position: 538854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:535469-535665:-1:exon

position:535469:-1
position: 535469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535665:-1
position: 535665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:534105-534204:-1:exon

position:534105:-1
position: 534105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534204:-1
position: 534204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:530651-531774:-1:exon

position:531774:-1
position: 531774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125485808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 4-like
translation: MAVVSLWLMVNFTYQFLRKKFYIFSQFMYDEHIKSRLIKDIRFFKETKDQNDQKYPFDRADKFNRGIRKLGLTPEGQSYLDQFRQLISQIGNAMGYVRMIRSGGLHCCSNAIRFVPDLEDIVNFEELVKEEGLSEETQTAARQLDSVLTDLTRNSAEGTEYFKMLVEVFSPEFRSSKNMHLRNFYIIVPPLTLNFVDHSISCKEKLNKKNKVGAAFTDDGFAMGVAYILKLLDQYQEFDSLHWFQSVREKYLKEKNAVVKQQNVQSTNQDEKLMQTMNLTQKRLDIYLQEFELLYFSLSSARIFFRGDQSAAEETQDRKEREDETAKSNSDDS
SIO_010081: LOC125485808
subclass of: SO_0000673
so part of: LOC125485808
location: complement(join(531740..531774,534105..534204,535469..535665,538758..538854,540420..540567,542035..542121,542207..542273,547195..547303,547890..548024,549103..549129))
location: region:531740-549129:-1
so has part: feature:549103-549129:-1:exon
so has part: feature:547890-548024:-1:exon
so has part: feature:547195-547303:-1:exon
so has part: feature:542207-542273:-1:exon
so has part: feature:542035-542121:-1:exon
so has part: feature:540420-540567:-1:exon
so has part: feature:538758-538854:-1:exon
so has part: feature:535469-535665:-1:exon
so has part: feature:534105-534204:-1:exon
so has part: feature:531740-531774:-1:exon

XP_048466507.1
type: Protein
SIO_000068: ncbiprotein

position:531740:-1
position: 531740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549103-549129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547890-548024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547195-547303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542207-542273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542035-542121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540420-540567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538758-538854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535469-535665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534105-534204:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:531740-531774:-1:exon

LOC109933446
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109933446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 550486..560839
location: region:550486-560839:1
so has part: feature:550486-560839:1:exon
subclass of: SO_0000010

109933446
type: Gene
SIO_000068: ncbigene

position:550486:1
position: 550486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560839:1
position: 560839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550486-560839:1:exon

LOC109933446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109933446
product: dynein axonemal heavy chain 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020532435.2
SIO_010081: LOC109933446
subclass of: SO_0000673
so part of: LOC109933446
location: join(550486..550650,550903..551076,553984..554094,556243..556303,560174..560839)
location: region:550486-560839:1
so has part: feature:550486-550650:1:exon
so has part: feature:550903-551076:1:exon
so has part: feature:553984-554094:1:exon
so has part: feature:556243-556303:1:exon
so has part: feature:560174-560839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550486-550650:1:exon

position:550650:1
position: 550650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550903-551076:1:exon

position:550903:1
position: 550903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551076:1
position: 551076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553984-554094:1:exon

position:553984:1
position: 553984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554094:1
position: 554094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:556243-556303:1:exon

position:556243:1
position: 556243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556303:1
position: 556303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:560174-560839:1:exon

position:560174:1
position: 560174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109933446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109933446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein axonemal heavy chain 3-like
translation: MDNGDKVGSTELHLNFVLCLNLQVPSMWSAKSYPSLKLLGSYITDLLSRIQFFQTWIHKGTPVVFWISGFYFTQSFLTGAIQNYARKYRIPIDHLGFQFEMTDQDHDMPAPPVDGVYVNGLYMEGAKWDRKKHKIGESLSKVLYDNLPIIWLKPGEKLSFKEESVYGCPVYKTSVRRGILSTTGHSTNYVLTIEFPSEQPQNHWVIRGVACLCQLDY
SIO_010081: LOC109933446
subclass of: SO_0000673
so part of: LOC109933446
location: join(550489..550650,550903..551076,553984..554094,556243..556303,560174..560319)
location: region:550489-560319:1
so has part: feature:550489-550650:1:exon
so has part: feature:550903-551076:1:exon
so has part: feature:553984-554094:1:exon
so has part: feature:556243-556303:1:exon
so has part: feature:560174-560319:1:exon

XP_020388024.2
type: Protein
SIO_000068: ncbiprotein

position:550489:1
position: 550489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560319:1
position: 560319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550489-550650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550903-551076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553984-554094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:556243-556303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560174-560319:1:exon

trnaw-cca
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnaw-cca
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 565469..565540
location: region:565469-565540:1
so has part: feature:565469-565540:1:exon
subclass of: SO_0000663

109933447
type: Gene
SIO_000068: ncbigene

position:565469:1
position: 565469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565540:1
position: 565540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565469-565540:1:exon

trnaw-cca
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnaw-cca
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:565501..565503,aa:Trp,seq:cca)
SIO_010081: trnaw-cca
subclass of: SO_0000673
so part of: trnaw-cca
location: 565469..565540
location: region:565469-565540:1
so has part: feature:565469-565540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565469-565540:1:exon

appl2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: appl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(567416..667209)
location: region:567416-667209:-1
so has part: feature:567416-667209:-1:exon
subclass of: SO_0000010

109911683
type: Gene
SIO_000068: ncbigene

position:567416:-1
position: 567416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667209:-1
position: 667209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567416-667209:-1:exon

appl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: appl2
product: adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048610506.1
SIO_010081: appl2
subclass of: SO_0000673
so part of: appl2
location: complement(join(567416..567688,573289..573336,573823..573969,574231..574267,581765..581939,592529..592581,592675..592827,594288..594379,594479..594535,594634..594676,598483..598671,601775..601936,602159..602241,603477..603623,610001..610059,628886..628973,636185..636256,643832..643891,652768..652866,667024..667209))
location: region:567416-667209:-1
so has part: feature:667024-667209:-1:exon
so has part: feature:652768-652866:-1:exon
so has part: feature:643832-643891:-1:exon
so has part: feature:636185-636256:-1:exon
so has part: feature:628886-628973:-1:exon
so has part: feature:610001-610059:-1:exon
so has part: feature:603477-603623:-1:exon
so has part: feature:602159-602241:-1:exon
so has part: feature:601775-601936:-1:exon
so has part: feature:598483-598671:-1:exon
so has part: feature:594634-594676:-1:exon
so has part: feature:594479-594535:-1:exon
so has part: feature:594288-594379:-1:exon
so has part: feature:592675-592827:-1:exon
so has part: feature:592529-592581:-1:exon
so has part: feature:581765-581939:-1:exon
so has part: feature:574231-574267:-1:exon
so has part: feature:573823-573969:-1:exon
so has part: feature:573289-573336:-1:exon
so has part: feature:567416-567688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667024-667209:-1:exon

position:667024:-1
position: 667024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:652768-652866:-1:exon

position:652768:-1
position: 652768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652866:-1
position: 652866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:643832-643891:-1:exon

position:643832:-1
position: 643832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643891:-1
position: 643891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:636185-636256:-1:exon

position:636185:-1
position: 636185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636256:-1
position: 636256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:628886-628973:-1:exon

position:628886:-1
position: 628886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628973:-1
position: 628973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:610001-610059:-1:exon

position:610001:-1
position: 610001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610059:-1
position: 610059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:603477-603623:-1:exon

position:603477:-1
position: 603477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603623:-1
position: 603623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:602159-602241:-1:exon

position:602159:-1
position: 602159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602241:-1
position: 602241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:601775-601936:-1:exon

position:601775:-1
position: 601775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601936:-1
position: 601936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:598483-598671:-1:exon

position:598483:-1
position: 598483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598671:-1
position: 598671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:594634-594676:-1:exon

position:594634:-1
position: 594634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594676:-1
position: 594676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:594479-594535:-1:exon

position:594479:-1
position: 594479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594535:-1
position: 594535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:594288-594379:-1:exon

position:594288:-1
position: 594288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594379:-1
position: 594379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:592675-592827:-1:exon

position:592675:-1
position: 592675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592827:-1
position: 592827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:592529-592581:-1:exon

position:592529:-1
position: 592529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592581:-1
position: 592581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:581765-581939:-1:exon

position:581765:-1
position: 581765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581939:-1
position: 581939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:574231-574267:-1:exon

position:574231:-1
position: 574231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574267:-1
position: 574267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:573823-573969:-1:exon

position:573823:-1
position: 573823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573969:-1
position: 573969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:573289-573336:-1:exon

position:573289:-1
position: 573289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573336:-1
position: 573336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:567416-567688:-1:exon

position:567688:-1
position: 567688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

appl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: appl2
product: adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048610505.1
SIO_010081: appl2
subclass of: SO_0000673
so part of: appl2
location: complement(join(567416..567688,573289..573336,573823..573969,574231..574267,581765..581939,592529..592581,592675..592827,594288..594379,594479..594535,594634..594676,598483..598671,601775..601936,602159..602241,603477..603623,610001..610059,621651..621692,628886..628973,636185..636256,643832..643891,652768..652866,667024..667209))
location: region:567416-667209:-1
so has part: feature:667024-667209:-1:exon
so has part: feature:652768-652866:-1:exon
so has part: feature:643832-643891:-1:exon
so has part: feature:636185-636256:-1:exon
so has part: feature:628886-628973:-1:exon
so has part: feature:621651-621692:-1:exon
so has part: feature:610001-610059:-1:exon
so has part: feature:603477-603623:-1:exon
so has part: feature:602159-602241:-1:exon
so has part: feature:601775-601936:-1:exon
so has part: feature:598483-598671:-1:exon
so has part: feature:594634-594676:-1:exon
so has part: feature:594479-594535:-1:exon
so has part: feature:594288-594379:-1:exon
so has part: feature:592675-592827:-1:exon
so has part: feature:592529-592581:-1:exon
so has part: feature:581765-581939:-1:exon
so has part: feature:574231-574267:-1:exon
so has part: feature:573823-573969:-1:exon
so has part: feature:573289-573336:-1:exon
so has part: feature:567416-567688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667024-667209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652768-652866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643832-643891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636185-636256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628886-628973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621651-621692:-1:exon

position:621651:-1
position: 621651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621692:-1
position: 621692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:610001-610059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603477-603623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602159-602241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:601775-601936:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:598483-598671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:594634-594676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:594479-594535:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:594288-594379:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:592675-592827:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592529-592581:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:581765-581939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:574231-574267:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:573823-573969:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:573289-573336:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:567416-567688:-1:exon

appl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: appl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DCC-interacting protein 13-beta isoform X2
translation: MPPVDKLLLEEALQDSPQTRSLLSVFEEDAGTLTEYTNQLLQAMQRVYGAQNEMSIATQQLSKQLLAYEKQNFALSKGDDEVISTLQRFARVVNELNSLHTELAKQVADTMIFPMIQFRERDLTEHDAAMAKYSKLPKKRENEKLKAEAVAEVATARKRQHQSSLQYFCALNALQYRKRVAMLDPLLGFTQGQINFFKMGVEMFSKKLEEFLSSVATMVQSIQGQLDAEAESMRLVQQELLLANESIYIPDNNTTTSKPANRNLLQKAGYLNIRNKTGLVSTSWERLYFFTQGGNLMCQPRGAVAGGLIMDLDNCSVMAVDCEDRRYCFQITSPSGKMGIVLQAEGKQEYEEWICTINNISRQIYLTDNPEAIAIRLNQTAVEAVTPMSTFQKKHESLRPEIAERESTEAVSNEQCLTDAPESADPLVVPGTPIQFDLCSTSEDFDCNKSVSRRVNPFGESDHDKAAASEDLLLHQEFTVRFLGSIEARTDQNDELIYETMRQVLAARAIHNVFRMTEFQMIVSSRELRFVDPQTQVTKASFPLSDVTLYTTHQDNKRLIGFVARASELQAECKALLNCCIFETNDDGVKICAFIDLARKINQAEKDPETLALLMKSIKLSADGKFLLLSQQTDKEETEEDFESEA
SIO_010081: appl2
subclass of: SO_0000673
so part of: appl2
location: complement(join(567566..567688,573289..573336,573823..573969,574231..574267,581765..581939,592529..592581,592675..592827,594288..594379,594479..594535,594634..594676,598483..598671,601775..601936,602159..602241,603477..603623,610001..610059,628886..628973,636185..636256,643832..643891,652768..652866,667024..667077))
location: region:567566-667077:-1
so has part: feature:667024-667077:-1:exon
so has part: feature:652768-652866:-1:exon
so has part: feature:643832-643891:-1:exon
so has part: feature:636185-636256:-1:exon
so has part: feature:628886-628973:-1:exon
so has part: feature:610001-610059:-1:exon
so has part: feature:603477-603623:-1:exon
so has part: feature:602159-602241:-1:exon
so has part: feature:601775-601936:-1:exon
so has part: feature:598483-598671:-1:exon
so has part: feature:594634-594676:-1:exon
so has part: feature:594479-594535:-1:exon
so has part: feature:594288-594379:-1:exon
so has part: feature:592675-592827:-1:exon
so has part: feature:592529-592581:-1:exon
so has part: feature:581765-581939:-1:exon
so has part: feature:574231-574267:-1:exon
so has part: feature:573823-573969:-1:exon
so has part: feature:573289-573336:-1:exon
so has part: feature:567566-567688:-1:exon

XP_048466463.1
type: Protein
SIO_000068: ncbiprotein

position:567566:-1
position: 567566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667077:-1
position: 667077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667024-667077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652768-652866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643832-643891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636185-636256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628886-628973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610001-610059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603477-603623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:602159-602241:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:601775-601936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598483-598671:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594634-594676:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:594479-594535:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:594288-594379:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592675-592827:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:592529-592581:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:581765-581939:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:574231-574267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:573823-573969:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:573289-573336:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:567566-567688:-1:exon

appl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: appl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DCC-interacting protein 13-beta isoform X1
translation: MPPVDKLLLEEALQDSPQTRSLLSVFEEDAGTLTEYTNQLLQAMQRVYGAQNEMSIATQQLSKQLLAYEKQNFALSKGDDEVISTLQRFARVVNELNSLHTELAKQVADTMIFPMIQFRERDLTEVSTLKDLFLLASNEHDAAMAKYSKLPKKRENEKLKAEAVAEVATARKRQHQSSLQYFCALNALQYRKRVAMLDPLLGFTQGQINFFKMGVEMFSKKLEEFLSSVATMVQSIQGQLDAEAESMRLVQQELLLANESIYIPDNNTTTSKPANRNLLQKAGYLNIRNKTGLVSTSWERLYFFTQGGNLMCQPRGAVAGGLIMDLDNCSVMAVDCEDRRYCFQITSPSGKMGIVLQAEGKQEYEEWICTINNISRQIYLTDNPEAIAIRLNQTAVEAVTPMSTFQKKHESLRPEIAERESTEAVSNEQCLTDAPESADPLVVPGTPIQFDLCSTSEDFDCNKSVSRRVNPFGESDHDKAAASEDLLLHQEFTVRFLGSIEARTDQNDELIYETMRQVLAARAIHNVFRMTEFQMIVSSRELRFVDPQTQVTKASFPLSDVTLYTTHQDNKRLIGFVARASELQAECKALLNCCIFETNDDGVKICAFIDLARKINQAEKDPETLALLMKSIKLSADGKFLLLSQQTDKEETEEDFESEA
SIO_010081: appl2
subclass of: SO_0000673
so part of: appl2
location: complement(join(567566..567688,573289..573336,573823..573969,574231..574267,581765..581939,592529..592581,592675..592827,594288..594379,594479..594535,594634..594676,598483..598671,601775..601936,602159..602241,603477..603623,610001..610059,621651..621692,628886..628973,636185..636256,643832..643891,652768..652866,667024..667077))
location: region:567566-667077:-1
so has part: feature:667024-667077:-1:exon
so has part: feature:652768-652866:-1:exon
so has part: feature:643832-643891:-1:exon
so has part: feature:636185-636256:-1:exon
so has part: feature:628886-628973:-1:exon
so has part: feature:621651-621692:-1:exon
so has part: feature:610001-610059:-1:exon
so has part: feature:603477-603623:-1:exon
so has part: feature:602159-602241:-1:exon
so has part: feature:601775-601936:-1:exon
so has part: feature:598483-598671:-1:exon
so has part: feature:594634-594676:-1:exon
so has part: feature:594479-594535:-1:exon
so has part: feature:594288-594379:-1:exon
so has part: feature:592675-592827:-1:exon
so has part: feature:592529-592581:-1:exon
so has part: feature:581765-581939:-1:exon
so has part: feature:574231-574267:-1:exon
so has part: feature:573823-573969:-1:exon
so has part: feature:573289-573336:-1:exon
so has part: feature:567566-567688:-1:exon

XP_048466462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:667024-667077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652768-652866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643832-643891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636185-636256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628886-628973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621651-621692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610001-610059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603477-603623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602159-602241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:601775-601936:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:598483-598671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:594634-594676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:594479-594535:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:594288-594379:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:592675-592827:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592529-592581:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:581765-581939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:574231-574267:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:573823-573969:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:573289-573336:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:567566-567688:-1:exon

LOC109920070
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109920070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 679393..688747
location: region:679393-688747:1
so has part: feature:679393-688747:1:exon
subclass of: SO_0000011

109920070
type: Gene
SIO_000068: ncbigene

position:679393:1
position: 679393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688747:1
position: 688747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679393-688747:1:exon

LOC109920070
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109920070
product: uncharacterized LOC109920070, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007264487.1
SIO_010081: LOC109920070
subclass of: SO_0000673
so part of: LOC109920070
location: join(679393..679497,686514..686538,688567..688747)
location: region:679393-688747:1
so has part: feature:679393-679497:1:exon
so has part: feature:686514-686538:1:exon
so has part: feature:688567-688747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:679393-679497:1:exon

position:679497:1
position: 679497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686514-686538:1:exon

position:686514:1
position: 686514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686538:1
position: 686538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:688567-688747:1:exon

position:688567:1
position: 688567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109920070
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109920070
product: uncharacterized LOC109920070, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007264488.1
SIO_010081: LOC109920070
subclass of: SO_0000673
so part of: LOC109920070
location: join(681722..681786,686514..686538,688567..688747)
location: region:681722-688747:1
so has part: feature:681722-681786:1:exon
so has part: feature:686514-686538:1:exon
so has part: feature:688567-688747:1:exon

position:681722:1
position: 681722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681722-681786:1:exon

position:681786:1
position: 681786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686514-686538:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:688567-688747:1:exon

LOC109920071
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109920071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 717220..729907
location: region:717220-729907:1
so has part: feature:717220-729907:1:exon
subclass of: SO_0000011

109920071
type: Gene
SIO_000068: ncbigene

position:717220:1
position: 717220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729907:1
position: 729907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717220-729907:1:exon

LOC109920071
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109920071
product: uncharacterized LOC109920071
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002259260.2
SIO_010081: LOC109920071
subclass of: SO_0000673
so part of: LOC109920071
location: join(717220..717334,720719..720798,725578..725618,728488..729907)
location: region:717220-729907:1
so has part: feature:717220-717334:1:exon
so has part: feature:720719-720798:1:exon
so has part: feature:725578-725618:1:exon
so has part: feature:728488-729907:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717220-717334:1:exon

position:717334:1
position: 717334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720719-720798:1:exon

position:720719:1
position: 720719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720798:1
position: 720798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725578-725618:1:exon

position:725578:1
position: 725578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725618:1
position: 725618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:728488-729907:1:exon

position:728488:1
position: 728488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nuak1b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: nuak1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(759687..824441)
location: region:759687-824441:-1
so has part: feature:759687-824441:-1:exon
subclass of: SO_0000010

109933443
type: Gene
SIO_000068: ncbigene

position:759687:-1
position: 759687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824441:-1
position: 824441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759687-824441:-1:exon

nuak1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nuak1b
product: NUAK family, SNF1-like kinase, 1b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048610384.1
SIO_010081: nuak1b
subclass of: SO_0000673
so part of: nuak1b
location: complement(join(759687..761566,763132..763264,798632..798783,802588..802708,824196..824441))
location: region:759687-824441:-1
so has part: feature:824196-824441:-1:exon
so has part: feature:802588-802708:-1:exon
so has part: feature:798632-798783:-1:exon
so has part: feature:763132-763264:-1:exon
so has part: feature:759687-761566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824196-824441:-1:exon

position:824196:-1
position: 824196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802588-802708:-1:exon

position:802588:-1
position: 802588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802708:-1
position: 802708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:798632-798783:-1:exon

position:798632:-1
position: 798632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798783:-1
position: 798783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:763132-763264:-1:exon

position:763132:-1
position: 763132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763264:-1
position: 763264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:759687-761566:-1:exon

position:761566:-1
position: 761566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nuak1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nuak1b
product: NUAK family, SNF1-like kinase, 1b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048610382.1
SIO_010081: nuak1b
subclass of: SO_0000673
so part of: nuak1b
location: complement(join(759687..761566,763132..763264,777951..778016,798632..798783,802588..802708,824196..824441))
location: region:759687-824441:-1
so has part: feature:824196-824441:-1:exon
so has part: feature:802588-802708:-1:exon
so has part: feature:798632-798783:-1:exon
so has part: feature:777951-778016:-1:exon
so has part: feature:763132-763264:-1:exon
so has part: feature:759687-761566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824196-824441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802588-802708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798632-798783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777951-778016:-1:exon

position:777951:-1
position: 777951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778016:-1
position: 778016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:763132-763264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759687-761566:-1:exon

nuak1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nuak1b
product: NUAK family, SNF1-like kinase, 1b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048610381.1
SIO_010081: nuak1b
subclass of: SO_0000673
so part of: nuak1b
location: complement(join(759687..761566,763132..763264,767862..767981,777951..778016,798632..798783,802588..802708,824196..824441))
location: region:759687-824441:-1
so has part: feature:824196-824441:-1:exon
so has part: feature:802588-802708:-1:exon
so has part: feature:798632-798783:-1:exon
so has part: feature:777951-778016:-1:exon
so has part: feature:767862-767981:-1:exon
so has part: feature:763132-763264:-1:exon
so has part: feature:759687-761566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824196-824441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802588-802708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798632-798783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777951-778016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:767862-767981:-1:exon

position:767862:-1
position: 767862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767981:-1
position: 767981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:763132-763264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759687-761566:-1:exon

nuak1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nuak1b
product: NUAK family, SNF1-like kinase, 1b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048610383.1
SIO_010081: nuak1b
subclass of: SO_0000673
so part of: nuak1b
location: complement(join(759687..761566,763132..763264,767862..767981,777951..778016,798632..798783,802588..802708,815783..815872))
location: region:759687-815872:-1
so has part: feature:815783-815872:-1:exon
so has part: feature:802588-802708:-1:exon
so has part: feature:798632-798783:-1:exon
so has part: feature:777951-778016:-1:exon
so has part: feature:767862-767981:-1:exon
so has part: feature:763132-763264:-1:exon
so has part: feature:759687-761566:-1:exon

position:815872:-1
position: 815872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:815783-815872:-1:exon

position:815783:-1
position: 815783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802588-802708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798632-798783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777951-778016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:767862-767981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:763132-763264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759687-761566:-1:exon

nuak1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nuak1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 1 isoform X4
translation: MDPPPQAVRRHQHQHNLKHRYVLGRTLGRGTYGRVKAATERLTGRTVAIKSIRKDRIKDEQDMAHIRREIEIMSSLNHPHIISIYEVFENKDKMVIVMECASKGELYDYINERHKLSERETRMFFRQIVAAVHYCHKVDSWALGVLLYALVYGTMPFDGCDHRNLVRQISSGNYQEPTPPSDARGLIRWMLMVNPERRATIEDIANHWWVNWGYQVSVCDCDPAGSSDAHFIGWQHHSRCLHSEGELKLKCPIKQVQSQGVLAAQTSVKKSKKETDIAHSLHEGTLSTKYNLKRPKGILKQKLANDCHAQSTEVVKGISEHELGINGPSVGAVGAVEAAPVCTQAAEHSITVPKKGILKKAQQRESGYYSSPEHSQSSELLDRDCTTSTNSICSPKHGAGLKGPGIIAQGRKGILKHTGKLSDSAMNSESPSGITESAQQVMEAQGCSLPPTIKDKGSLLAKESFKLHHLPEDRPIRSCVSAGNLLHLEDFEELRIHPPIRHMKAFRQQLGDSSSSLLTDMDNFTQIYKKALEISSNLN
SIO_010081: nuak1b
subclass of: SO_0000673
so part of: nuak1b
location: complement(join(760491..761566,763132..763264,798632..798783,802588..802708,824196..824333))
location: region:760491-824333:-1
so has part: feature:824196-824333:-1:exon
so has part: feature:802588-802708:-1:exon
so has part: feature:798632-798783:-1:exon
so has part: feature:763132-763264:-1:exon
so has part: feature:760491-761566:-1:exon

XP_048466341.1
type: Protein
SIO_000068: ncbiprotein

position:760491:-1
position: 760491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824333:-1
position: 824333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824196-824333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802588-802708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798632-798783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763132-763264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:760491-761566:-1:exon

nuak1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nuak1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 1 isoform X2
translation: MDPPPQAVRRHQHQHNLKHRYVLGRTLGRGTYGRVKAATERLTGRTVAIKSIRKDRIKDEQDMAHIRREIEIMSSLNHPHIISIYEVFENKDKMVIVMECASKGELYDYINERHKLSERETRMFFRQIVAAVHYCHKNGVVHRDLKLENILLDENYNIKVDSWALGVLLYALVYGTMPFDGCDHRNLVRQISSGNYQEPTPPSDARGLIRWMLMVNPERRATIEDIANHWWVNWGYQVSVCDCDPAGSSDAHFIGWQHHSRCLHSEGELKLKCPIKQVQSQGVLAAQTSVKKSKKETDIAHSLHEGTLSTKYNLKRPKGILKQKLANDCHAQSTEVVKGISEHELGINGPSVGAVGAVEAAPVCTQAAEHSITVPKKGILKKAQQRESGYYSSPEHSQSSELLDRDCTTSTNSICSPKHGAGLKGPGIIAQGRKGILKHTGKLSDSAMNSESPSGITESAQQVMEAQGCSLPPTIKDKGSLLAKESFKLHHLPEDRPIRSCVSAGNLLHLEDFEELRIHPPIRHMKAFRQQLGDSSSSLLTDMDNFTQIYKKALEISSNLN
SIO_010081: nuak1b
subclass of: SO_0000673
so part of: nuak1b
location: complement(join(760491..761566,763132..763264,777951..778016,798632..798783,802588..802708,824196..824333))
location: region:760491-824333:-1
so has part: feature:824196-824333:-1:exon
so has part: feature:802588-802708:-1:exon
so has part: feature:798632-798783:-1:exon
so has part: feature:777951-778016:-1:exon
so has part: feature:763132-763264:-1:exon
so has part: feature:760491-761566:-1:exon

XP_048466339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824196-824333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802588-802708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798632-798783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777951-778016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763132-763264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760491-761566:-1:exon

nuak1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nuak1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 1 isoform X1
translation: MDPPPQAVRRHQHQHNLKHRYVLGRTLGRGTYGRVKAATERLTGRTVAIKSIRKDRIKDEQDMAHIRREIEIMSSLNHPHIISIYEVFENKDKMVIVMECASKGELYDYINERHKLSERETRMFFRQIVAAVHYCHKNGVVHRDLKLENILLDENYNIKIADFGLSNLYQKDKFLQTFCGSPLYASPEIVNGHPYHGPEVDSWALGVLLYALVYGTMPFDGCDHRNLVRQISSGNYQEPTPPSDARGLIRWMLMVNPERRATIEDIANHWWVNWGYQVSVCDCDPAGSSDAHFIGWQHHSRCLHSEGELKLKCPIKQVQSQGVLAAQTSVKKSKKETDIAHSLHEGTLSTKYNLKRPKGILKQKLANDCHAQSTEVVKGISEHELGINGPSVGAVGAVEAAPVCTQAAEHSITVPKKGILKKAQQRESGYYSSPEHSQSSELLDRDCTTSTNSICSPKHGAGLKGPGIIAQGRKGILKHTGKLSDSAMNSESPSGITESAQQVMEAQGCSLPPTIKDKGSLLAKESFKLHHLPEDRPIRSCVSAGNLLHLEDFEELRIHPPIRHMKAFRQQLGDSSSSLLTDMDNFTQIYKKALEISSNLN
SIO_010081: nuak1b
subclass of: SO_0000673
so part of: nuak1b
location: complement(join(760491..761566,763132..763264,767862..767981,777951..778016,798632..798783,802588..802708,824196..824333))
location: region:760491-824333:-1
so has part: feature:824196-824333:-1:exon
so has part: feature:802588-802708:-1:exon
so has part: feature:798632-798783:-1:exon
so has part: feature:777951-778016:-1:exon
so has part: feature:767862-767981:-1:exon
so has part: feature:763132-763264:-1:exon
so has part: feature:760491-761566:-1:exon

XP_048466338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824196-824333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802588-802708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798632-798783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777951-778016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:767862-767981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:763132-763264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:760491-761566:-1:exon

nuak1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nuak1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 1 isoform X3
translation: MAHIRREIEIMSSLNHPHIISIYEVFENKDKMVIVMECASKGELYDYINERHKLSERETRMFFRQIVAAVHYCHKNGVVHRDLKLENILLDENYNIKIADFGLSNLYQKDKFLQTFCGSPLYASPEIVNGHPYHGPEVDSWALGVLLYALVYGTMPFDGCDHRNLVRQISSGNYQEPTPPSDARGLIRWMLMVNPERRATIEDIANHWWVNWGYQVSVCDCDPAGSSDAHFIGWQHHSRCLHSEGELKLKCPIKQVQSQGVLAAQTSVKKSKKETDIAHSLHEGTLSTKYNLKRPKGILKQKLANDCHAQSTEVVKGISEHELGINGPSVGAVGAVEAAPVCTQAAEHSITVPKKGILKKAQQRESGYYSSPEHSQSSELLDRDCTTSTNSICSPKHGAGLKGPGIIAQGRKGILKHTGKLSDSAMNSESPSGITESAQQVMEAQGCSLPPTIKDKGSLLAKESFKLHHLPEDRPIRSCVSAGNLLHLEDFEELRIHPPIRHMKAFRQQLGDSSSSLLTDMDNFTQIYKKALEISSNLN
SIO_010081: nuak1b
subclass of: SO_0000673
so part of: nuak1b
location: complement(join(760491..761566,763132..763264,767862..767981,777951..778016,798632..798783,802588..802660))
location: region:760491-802660:-1
so has part: feature:802588-802660:-1:exon
so has part: feature:798632-798783:-1:exon
so has part: feature:777951-778016:-1:exon
so has part: feature:767862-767981:-1:exon
so has part: feature:763132-763264:-1:exon
so has part: feature:760491-761566:-1:exon

XP_048466340.1
type: Protein
SIO_000068: ncbiprotein

position:802660:-1
position: 802660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802588-802660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798632-798783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777951-778016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:767862-767981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763132-763264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760491-761566:-1:exon

LOC125485827
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485827
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(842410..842655)
location: region:842410-842655:-1
so has part: feature:842410-842655:-1:exon
subclass of: SO_0000578

125485827
type: Gene
SIO_000068: ncbigene

position:842410:-1
position: 842410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842655:-1
position: 842655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842410-842655:-1:exon

LOC125485827
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: snoRNA
gene: LOC125485827
product: small nucleolar RNA SNORA53
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00563
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007264517.1
SIO_010081: LOC125485827
subclass of: SO_0000673
so part of: LOC125485827
location: complement(842410..842655)
location: region:842410-842655:-1
so has part: feature:842410-842655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:842410-842655:-1:exon

LOC109933444
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109933444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(842894..850422)
location: region:842894-850422:-1
so has part: feature:842894-850422:-1:exon
subclass of: SO_0000010

109933444
type: Gene
SIO_000068: ncbigene

position:842894:-1
position: 842894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850422:-1
position: 850422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842894-850422:-1:exon

LOC109933444
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109933444
product: phosphate carrier protein, mitochondrial, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020532431.2
SIO_010081: LOC109933444
subclass of: SO_0000673
so part of: LOC109933444
location: complement(join(842894..843229,843313..843423,843802..843974,846198..846379,847580..847759,848892..849016,849646..850422))
location: region:842894-850422:-1
so has part: feature:849646-850422:-1:exon
so has part: feature:848892-849016:-1:exon
so has part: feature:847580-847759:-1:exon
so has part: feature:846198-846379:-1:exon
so has part: feature:843802-843974:-1:exon
so has part: feature:843313-843423:-1:exon
so has part: feature:842894-843229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:849646-850422:-1:exon

position:849646:-1
position: 849646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:848892-849016:-1:exon

position:848892:-1
position: 848892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849016:-1
position: 849016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:847580-847759:-1:exon

position:847580:-1
position: 847580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847759:-1
position: 847759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846198-846379:-1:exon

position:846198:-1
position: 846198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846379:-1
position: 846379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:843802-843974:-1:exon

position:843802:-1
position: 843802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843974:-1
position: 843974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:843313-843423:-1:exon

position:843313:-1
position: 843313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843423:-1
position: 843423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:842894-843229:-1:exon

position:843229:-1
position: 843229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109933444
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109933444
product: phosphate carrier protein, mitochondrial, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610385.1
SIO_010081: LOC109933444
subclass of: SO_0000673
so part of: LOC109933444
location: complement(join(842894..843229,843313..843423,843802..843974,846198..846379,847580..847759,849187..849332,849649..849897))
location: region:842894-849897:-1
so has part: feature:849649-849897:-1:exon
so has part: feature:849187-849332:-1:exon
so has part: feature:847580-847759:-1:exon
so has part: feature:846198-846379:-1:exon
so has part: feature:843802-843974:-1:exon
so has part: feature:843313-843423:-1:exon
so has part: feature:842894-843229:-1:exon

position:849897:-1
position: 849897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849649-849897:-1:exon

position:849649:-1
position: 849649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:849187-849332:-1:exon

position:849187:-1
position: 849187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849332:-1
position: 849332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:847580-847759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846198-846379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843802-843974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843313-843423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:842894-843229:-1:exon

LOC109933444
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109933444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphate carrier protein, mitochondrial isoform X2
translation: MYPSSLLALSGGNPFSAPRFQLLTEPAFPHPHAASKASLPSERVAPRRRLAAAAVIPSYTEQEQYSCEYGSARFYALCGLGGILSCGTTHTAVVPLDLVKCRIQVDPGKYQSIFKGFSVTLKEDGVRGLGKGWAPTFIGYSMQGLCKFGFYEVFKNIYGDILGEENAYLWRTSLYLAASASAEFFADIALAPMEACKVRIQTQPGYANTLREVLPKMYAEEGLWAFYKGVSPLWMRQIPYTMMKFACFERTVEALYKYVVPKPRDSCTKAEQLVVTFIAGYIAGVFCAIVSHPADSVVSVLNKEKGSSAFQVLKRLGPIGVWKGLVARIIMIGTLTALQWFIYDSVKVYFRLPRPPPPEMPASLKKKLGLQ
SIO_010081: LOC109933444
subclass of: SO_0000673
so part of: LOC109933444
location: complement(join(843072..843229,843313..843423,843802..843974,846198..846379,847580..847759,849187..849332,849649..849814))
location: region:843072-849814:-1
so has part: feature:849649-849814:-1:exon
so has part: feature:849187-849332:-1:exon
so has part: feature:847580-847759:-1:exon
so has part: feature:846198-846379:-1:exon
so has part: feature:843802-843974:-1:exon
so has part: feature:843313-843423:-1:exon
so has part: feature:843072-843229:-1:exon

XP_048466342.1
type: Protein
SIO_000068: ncbiprotein

position:843072:-1
position: 843072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849814:-1
position: 849814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849649-849814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849187-849332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847580-847759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846198-846379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843802-843974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843313-843423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:843072-843229:-1:exon

LOC109933444
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109933444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphate carrier protein, mitochondrial isoform X1
translation: MYPSSLLALSGGNPFSAPRFQLLTEPAFPHPHAASKASLPSERVAPRRRLAAAAVKEEYSCEYGSAKFYALCGFGGVLSCGLTHTAVVPLDLVKCRIQVDPGKYQSIFKGFSVTLKEDGVRGLGKGWAPTFIGYSMQGLCKFGFYEVFKNIYGDILGEENAYLWRTSLYLAASASAEFFADIALAPMEACKVRIQTQPGYANTLREVLPKMYAEEGLWAFYKGVSPLWMRQIPYTMMKFACFERTVEALYKYVVPKPRDSCTKAEQLVVTFIAGYIAGVFCAIVSHPADSVVSVLNKEKGSSAFQVLKRLGPIGVWKGLVARIIMIGTLTALQWFIYDSVKVYFRLPRPPPPEMPASLKKKLGLQ
SIO_010081: LOC109933444
subclass of: SO_0000673
so part of: LOC109933444
location: complement(join(843072..843229,843313..843423,843802..843974,846198..846379,847580..847759,848892..849016,849646..849814))
location: region:843072-849814:-1
so has part: feature:849646-849814:-1:exon
so has part: feature:848892-849016:-1:exon
so has part: feature:847580-847759:-1:exon
so has part: feature:846198-846379:-1:exon
so has part: feature:843802-843974:-1:exon
so has part: feature:843313-843423:-1:exon
so has part: feature:843072-843229:-1:exon

XP_020388020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:849646-849814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848892-849016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847580-847759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846198-846379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843802-843974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843313-843423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:843072-843229:-1:exon

LOC125485826
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485826
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(845909..846160)
location: region:845909-846160:-1
so has part: feature:845909-846160:-1:exon
subclass of: SO_0000578

125485826
type: Gene
SIO_000068: ncbigene

position:845909:-1
position: 845909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846160:-1
position: 846160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845909-846160:-1:exon

LOC125485826
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: snoRNA
gene: LOC125485826
product: small nucleolar RNA SNORA53
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00563
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007264516.1
SIO_010081: LOC125485826
subclass of: SO_0000673
so part of: LOC125485826
location: complement(845909..846160)
location: region:845909-846160:-1
so has part: feature:845909-846160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:845909-846160:-1:exon

LOC109933445
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109933445
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(858398..888157)
location: region:858398-888157:-1
so has part: feature:858398-888157:-1:exon
subclass of: SO_0000010

109933445
type: Gene
SIO_000068: ncbigene

position:858398:-1
position: 858398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888157:-1
position: 888157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858398-888157:-1:exon

LOC109933445
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109933445
product: lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610386.1
SIO_010081: LOC109933445
subclass of: SO_0000673
so part of: LOC109933445
location: complement(join(858398..859504,864186..864265,869100..869185,870728..870847,875671..875797,887852..888157))
location: region:858398-888157:-1
so has part: feature:887852-888157:-1:exon
so has part: feature:875671-875797:-1:exon
so has part: feature:870728-870847:-1:exon
so has part: feature:869100-869185:-1:exon
so has part: feature:864186-864265:-1:exon
so has part: feature:858398-859504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887852-888157:-1:exon

position:887852:-1
position: 887852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875671-875797:-1:exon

position:875671:-1
position: 875671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875797:-1
position: 875797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:870728-870847:-1:exon

position:870728:-1
position: 870728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870847:-1
position: 870847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:869100-869185:-1:exon

position:869100:-1
position: 869100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869185:-1
position: 869185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864186-864265:-1:exon

position:864186:-1
position: 864186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864265:-1
position: 864265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858398-859504:-1:exon

position:859504:-1
position: 859504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109933445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109933445
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma
translation: MPEYLQDPSVLTKERLKSELIAHSVQLPLGDQRKDVYVQLYLQHLTARNSGRGTDFSSDEEADSGLGATRGRGRAGRKATKKTDKTTVEEKEFIEVSDLSDEDLKEQLIKYGFSAGPIVATTRKIYEKKLEQLMDQGSVTQENQPNGSTDSDQYSDTEEEIVMEKKELFTSKTKTPVVTRQRKTEFSWVEQKEVVRDNLREEIFPDEAPTPTGISATCRKPIRGAAGRPIEFTYKDALPRRPLPKIQPVTQGKLEKNKSQRSVSIWIQIVVLLIVALFLLLVYQAMETNKGNPFPVIPESSSKSAAGGHQ
SIO_010081: LOC109933445
subclass of: SO_0000673
so part of: LOC109933445
location: complement(join(859216..859504,864186..864265,869100..869185,870728..870847,875671..875797,887852..888082))
location: region:859216-888082:-1
so has part: feature:887852-888082:-1:exon
so has part: feature:875671-875797:-1:exon
so has part: feature:870728-870847:-1:exon
so has part: feature:869100-869185:-1:exon
so has part: feature:864186-864265:-1:exon
so has part: feature:859216-859504:-1:exon

XP_048466343.1
type: Protein
SIO_000068: ncbiprotein

position:859216:-1
position: 859216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888082:-1
position: 888082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887852-888082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875671-875797:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870728-870847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869100-869185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864186-864265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:859216-859504:-1:exon

LOC125485809
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(918664..930904)
location: region:918664-930904:-1
so has part: feature:918664-930904:-1:exon
subclass of: SO_0000010

125485809
type: Gene
SIO_000068: ncbigene

position:918664:-1
position: 918664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930904:-1
position: 930904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918664-930904:-1:exon

LOC125485809
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485809
product: dynein axonemal heavy chain 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048610551.1
SIO_010081: LOC125485809
subclass of: SO_0000673
so part of: LOC125485809
location: complement(join(918664..918798,920510..920692,926811..926909,927507..927599,928028..928288,929797..930904))
location: region:918664-930904:-1
so has part: feature:929797-930904:-1:exon
so has part: feature:928028-928288:-1:exon
so has part: feature:927507-927599:-1:exon
so has part: feature:926811-926909:-1:exon
so has part: feature:920510-920692:-1:exon
so has part: feature:918664-918798:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:929797-930904:-1:exon

position:929797:-1
position: 929797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:928028-928288:-1:exon

position:928028:-1
position: 928028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928288:-1
position: 928288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927507-927599:-1:exon

position:927507:-1
position: 927507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927599:-1
position: 927599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:926811-926909:-1:exon

position:926811:-1
position: 926811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926909:-1
position: 926909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:920510-920692:-1:exon

position:920510:-1
position: 920510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920692:-1
position: 920692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:918664-918798:-1:exon

position:918798:-1
position: 918798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125485809
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein axonemal heavy chain 3-like
translation: MGIGGKLCSVRSHYWQNGRQLSLLEIFLNEYNQVPFEALIYLTGECNYGGRVTDDHDRRLLLSLLENFYCQSVISDDCYKFSASGIYLIPRRNSYESYLEYIKQLPLNADPEVFGLHENANITKEQKETQRLFDGILSTLPREVSGGDRSSSEIVQELATDILSKIPSDFVMEDVMNRYPTKYSESMNTVLVQELLHFNRLISIIRTSLRDINKAIQGLILMSSQLEDIFNSMIVGKCLDAALFVYGGLVSIEVKDLVRVCGLPVYLGPGFAISQSLYHYI
SIO_010081: LOC125485809
subclass of: SO_0000673
so part of: LOC125485809
location: complement(join(918664..918798,920510..920692,926811..926909,927507..927599,928028..928288,929797..929871))
location: region:918664-929871:-1
so has part: feature:929797-929871:-1:exon
so has part: feature:928028-928288:-1:exon
so has part: feature:927507-927599:-1:exon
so has part: feature:926811-926909:-1:exon
so has part: feature:920510-920692:-1:exon
so has part: feature:918664-918798:-1:exon

XP_048466508.1
type: Protein
SIO_000068: ncbiprotein

position:929871:-1
position: 929871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929797-929871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928028-928288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927507-927599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926811-926909:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920510-920692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:918664-918798:-1:exon

LOC109934535
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109934535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(931460..1360462)
location: region:931460-1360462:-1
so has part: feature:931460-1360462:-1:exon
subclass of: SO_0000010

109934535
type: Gene
SIO_000068: ncbigene

position:931460:-1
position: 931460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360462:-1
position: 1360462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931460-1360462:-1:exon

LOC109934535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109934535
product: dynein axonemal heavy chain 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048610380.1
SIO_010081: LOC109934535
subclass of: SO_0000673
so part of: LOC109934535
location: complement(join(931460..931726,935758..935895,937407..937700,940264..940340,951147..951324,963361..963486,966257..966515,967342..967520,973116..973308,974837..974967,978466..978669,982461..982632,982718..982851,984209..984380,985405..985589,987768..987932,989389..989496,991602..991760,998217..998399,1001305..1001467,1006501..1006634,1011685..1011876,1014535..1014630,1018312..1018502,1025887..1026025,1026148..1026330,1028494..1028643,1028767..1028880,1029492..1029711,1035594..1035743,1036830..1037071,1042354..1042374,1044823..1045018,1049964..1050149,1052468..1052601,1052988..1053102,1055464..1055564,1057668..1057798,1065835..1066057,1069544..1069708,1073949..1074092,1076263..1076400,1077775..1077945,1081487..1081606,1085660..1085768,1086657..1086855,1104928..1105069,1114354..1114506,1149409..1149637,1149755..1149913,1156405..1156544,1157050..1157148,1160621..1160851,1177493..1177681,1178039..1178233,1184281..1184476,1185592..1185722,1186598..1186801,1208036..1208240,1211112..1211230,1213931..1214065,1225667..1225870,1227776..1227974,1228784..1228914,1230003..1230107,1236919..1237057,1286357..1286489,1287287..1287663,1324146..1324263,1325232..1325311,1336152..1336243,1338353..1338569,1360375..1360462))
location: region:931460-1360462:-1
so has part: feature:1360375-1360462:-1:exon
so has part: feature:1338353-1338569:-1:exon
so has part: feature:1336152-1336243:-1:exon
so has part: feature:1325232-1325311:-1:exon
so has part: feature:1324146-1324263:-1:exon
so has part: feature:1287287-1287663:-1:exon
so has part: feature:1286357-1286489:-1:exon
so has part: feature:1236919-1237057:-1:exon
so has part: feature:1230003-1230107:-1:exon
so has part: feature:1228784-1228914:-1:exon
so has part: feature:1227776-1227974:-1:exon
so has part: feature:1225667-1225870:-1:exon
so has part: feature:1213931-1214065:-1:exon
so has part: feature:1211112-1211230:-1:exon
so has part: feature:1208036-1208240:-1:exon
so has part: feature:1186598-1186801:-1:exon
so has part: feature:1185592-1185722:-1:exon
so has part: feature:1184281-1184476:-1:exon
so has part: feature:1178039-1178233:-1:exon
so has part: feature:1177493-1177681:-1:exon
so has part: feature:1160621-1160851:-1:exon
so has part: feature:1157050-1157148:-1:exon
so has part: feature:1156405-1156544:-1:exon
so has part: feature:1149755-1149913:-1:exon
so has part: feature:1149409-1149637:-1:exon
so has part: feature:1114354-1114506:-1:exon
so has part: feature:1104928-1105069:-1:exon
so has part: feature:1086657-1086855:-1:exon
so has part: feature:1085660-1085768:-1:exon
so has part: feature:1081487-1081606:-1:exon
so has part: feature:1077775-1077945:-1:exon
so has part: feature:1076263-1076400:-1:exon
so has part: feature:1073949-1074092:-1:exon
so has part: feature:1069544-1069708:-1:exon
so has part: feature:1065835-1066057:-1:exon
so has part: feature:1057668-1057798:-1:exon
so has part: feature:1055464-1055564:-1:exon
so has part: feature:1052988-1053102:-1:exon
so has part: feature:1052468-1052601:-1:exon
so has part: feature:1049964-1050149:-1:exon
so has part: feature:1044823-1045018:-1:exon
so has part: feature:1042354-1042374:-1:exon
so has part: feature:1036830-1037071:-1:exon
so has part: feature:1035594-1035743:-1:exon
so has part: feature:1029492-1029711:-1:exon
so has part: feature:1028767-1028880:-1:exon
so has part: feature:1028494-1028643:-1:exon
so has part: feature:1026148-1026330:-1:exon
so has part: feature:1025887-1026025:-1:exon
so has part: feature:1018312-1018502:-1:exon
so has part: feature:1014535-1014630:-1:exon
so has part: feature:1011685-1011876:-1:exon
so has part: feature:1006501-1006634:-1:exon
so has part: feature:1001305-1001467:-1:exon
so has part: feature:998217-998399:-1:exon
so has part: feature:991602-991760:-1:exon
so has part: feature:989389-989496:-1:exon
so has part: feature:987768-987932:-1:exon
so has part: feature:985405-985589:-1:exon
so has part: feature:984209-984380:-1:exon
so has part: feature:982718-982851:-1:exon
so has part: feature:982461-982632:-1:exon
so has part: feature:978466-978669:-1:exon
so has part: feature:974837-974967:-1:exon
so has part: feature:973116-973308:-1:exon
so has part: feature:967342-967520:-1:exon
so has part: feature:966257-966515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1360375-1360462:-1:exon

position:1360375:-1
position: 1360375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1338353-1338569:-1:exon

position:1338353:-1
position: 1338353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338569:-1
position: 1338569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1336152-1336243:-1:exon

position:1336152:-1
position: 1336152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336243:-1
position: 1336243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1325232-1325311:-1:exon

position:1325232:-1
position: 1325232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325311:-1
position: 1325311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1324146-1324263:-1:exon

position:1324146:-1
position: 1324146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324263:-1
position: 1324263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1287287-1287663:-1:exon

position:1287287:-1
position: 1287287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287663:-1
position: 1287663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1286357-1286489:-1:exon

position:1286357:-1
position: 1286357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286489:-1
position: 1286489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1236919-1237057:-1:exon

position:1236919:-1
position: 1236919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237057:-1
position: 1237057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1230003-1230107:-1:exon

position:1230003:-1
position: 1230003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230107:-1
position: 1230107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1228784-1228914:-1:exon

position:1228784:-1
position: 1228784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228914:-1
position: 1228914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1227776-1227974:-1:exon

position:1227776:-1
position: 1227776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227974:-1
position: 1227974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1225667-1225870:-1:exon

position:1225667:-1
position: 1225667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225870:-1
position: 1225870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1213931-1214065:-1:exon

position:1213931:-1
position: 1213931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214065:-1
position: 1214065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1211112-1211230:-1:exon

position:1211112:-1
position: 1211112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211230:-1
position: 1211230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1208036-1208240:-1:exon

position:1208036:-1
position: 1208036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208240:-1
position: 1208240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1186598-1186801:-1:exon

position:1186598:-1
position: 1186598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186801:-1
position: 1186801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1185592-1185722:-1:exon

position:1185592:-1
position: 1185592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185722:-1
position: 1185722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1184281-1184476:-1:exon

position:1184281:-1
position: 1184281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184476:-1
position: 1184476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1178039-1178233:-1:exon

position:1178039:-1
position: 1178039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178233:-1
position: 1178233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1177493-1177681:-1:exon

position:1177493:-1
position: 1177493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177681:-1
position: 1177681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1160621-1160851:-1:exon

position:1160621:-1
position: 1160621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160851:-1
position: 1160851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1157050-1157148:-1:exon

position:1157050:-1
position: 1157050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157148:-1
position: 1157148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1156405-1156544:-1:exon

position:1156405:-1
position: 1156405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156544:-1
position: 1156544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1149755-1149913:-1:exon

position:1149755:-1
position: 1149755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149913:-1
position: 1149913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1149409-1149637:-1:exon

position:1149409:-1
position: 1149409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149637:-1
position: 1149637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1114354-1114506:-1:exon

position:1114354:-1
position: 1114354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114506:-1
position: 1114506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1104928-1105069:-1:exon

position:1104928:-1
position: 1104928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105069:-1
position: 1105069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1086657-1086855:-1:exon

position:1086657:-1
position: 1086657
reference: sequence
type: ReverseStrandPosition
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position:1086855:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1085660-1085768:-1:exon

position:1085660:-1
position: 1085660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085768:-1
position: 1085768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1081487-1081606:-1:exon

position:1081487:-1
position: 1081487
reference: sequence
type: ReverseStrandPosition
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position:1081606:-1
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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:1077775-1077945:-1:exon

position:1077775:-1
position: 1077775
reference: sequence
type: ReverseStrandPosition
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position:1077945:-1
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reference: sequence
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urn:…
SIO_000300: 32
SIO_000628: feature:1076263-1076400:-1:exon

position:1076263:-1
position: 1076263
reference: sequence
type: ReverseStrandPosition
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position:1076400:-1
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reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:1073949-1074092:-1:exon

position:1073949:-1
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reference: sequence
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position:1074092:-1
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reference: sequence
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urn:…
SIO_000300: 34
SIO_000628: feature:1069544-1069708:-1:exon

position:1069544:-1
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reference: sequence
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position:1069708:-1
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urn:…
SIO_000300: 35
SIO_000628: feature:1065835-1066057:-1:exon

position:1065835:-1
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reference: sequence
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position:1066057:-1
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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:1057668-1057798:-1:exon

position:1057668:-1
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reference: sequence
type: ReverseStrandPosition
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position:1057798:-1
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reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:1055464-1055564:-1:exon

position:1055464:-1
position: 1055464
reference: sequence
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position:1055564:-1
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reference: sequence
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urn:…
SIO_000300: 38
SIO_000628: feature:1052988-1053102:-1:exon

position:1052988:-1
position: 1052988
reference: sequence
type: ReverseStrandPosition
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position:1053102:-1
position: 1053102
reference: sequence
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urn:…
SIO_000300: 39
SIO_000628: feature:1052468-1052601:-1:exon

position:1052468:-1
position: 1052468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052601:-1
position: 1052601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1049964-1050149:-1:exon

position:1049964:-1
position: 1049964
reference: sequence
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position:1050149:-1
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reference: sequence
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urn:…
SIO_000300: 41
SIO_000628: feature:1044823-1045018:-1:exon

position:1044823:-1
position: 1044823
reference: sequence
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position:1045018:-1
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reference: sequence
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urn:…
SIO_000300: 42
SIO_000628: feature:1042354-1042374:-1:exon

position:1042354:-1
position: 1042354
reference: sequence
type: ReverseStrandPosition
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position:1042374:-1
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reference: sequence
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urn:…
SIO_000300: 43
SIO_000628: feature:1036830-1037071:-1:exon

position:1036830:-1
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reference: sequence
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position:1037071:-1
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reference: sequence
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urn:…
SIO_000300: 44
SIO_000628: feature:1035594-1035743:-1:exon

position:1035594:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035743:-1
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reference: sequence
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urn:…
SIO_000300: 45
SIO_000628: feature:1029492-1029711:-1:exon

position:1029492:-1
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reference: sequence
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position:1029711:-1
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reference: sequence
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urn:…
SIO_000300: 46
SIO_000628: feature:1028767-1028880:-1:exon

position:1028767:-1
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reference: sequence
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position:1028880:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1028494-1028643:-1:exon

position:1028494:-1
position: 1028494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028643:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1026148-1026330:-1:exon

position:1026148:-1
position: 1026148
reference: sequence
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position:1026330:-1
position: 1026330
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1025887-1026025:-1:exon

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position: 1025887
reference: sequence
type: ReverseStrandPosition
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position:1026025:-1
position: 1026025
reference: sequence
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urn:…
SIO_000300: 50
SIO_000628: feature:1018312-1018502:-1:exon

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reference: sequence
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position:1018502:-1
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urn:…
SIO_000300: 51
SIO_000628: feature:1014535-1014630:-1:exon

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reference: sequence
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position: 1014630
reference: sequence
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urn:…
SIO_000300: 52
SIO_000628: feature:1011685-1011876:-1:exon

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position: 1011685
reference: sequence
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position:1011876:-1
position: 1011876
reference: sequence
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urn:…
SIO_000300: 53
SIO_000628: feature:1006501-1006634:-1:exon

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reference: sequence
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urn:…
SIO_000300: 54
SIO_000628: feature:1001305-1001467:-1:exon

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position: 1001305
reference: sequence
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position: 1001467
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urn:…
SIO_000300: 55
SIO_000628: feature:998217-998399:-1:exon

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urn:…
SIO_000300: 56
SIO_000628: feature:991602-991760:-1:exon

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position: 991602
reference: sequence
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position: 991760
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urn:…
SIO_000300: 57
SIO_000628: feature:989389-989496:-1:exon

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reference: sequence
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urn:…
SIO_000300: 58
SIO_000628: feature:987768-987932:-1:exon

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urn:…
SIO_000300: 59
SIO_000628: feature:985405-985589:-1:exon

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reference: sequence
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urn:…
SIO_000300: 60
SIO_000628: feature:984209-984380:-1:exon

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urn:…
SIO_000300: 61
SIO_000628: feature:982718-982851:-1:exon

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reference: sequence
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urn:…
SIO_000300: 62
SIO_000628: feature:982461-982632:-1:exon

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reference: sequence
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urn:…
SIO_000300: 63
SIO_000628: feature:978466-978669:-1:exon

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urn:…
SIO_000300: 64
SIO_000628: feature:974837-974967:-1:exon

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reference: sequence
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position: 974967
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urn:…
SIO_000300: 65
SIO_000628: feature:973116-973308:-1:exon

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urn:…
SIO_000300: 66
SIO_000628: feature:967342-967520:-1:exon

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reference: sequence
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urn:…
SIO_000300: 67
SIO_000628: feature:966257-966515:-1:exon

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urn:…
SIO_000300: 68
SIO_000628: feature:963361-963486:-1:exon

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urn:…
SIO_000300: 69
SIO_000628: feature:951147-951324:-1:exon

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urn:…
SIO_000300: 70
SIO_000628: feature:940264-940340:-1:exon

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urn:…
SIO_000300: 71
SIO_000628: feature:937407-937700:-1:exon

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reference: sequence
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position:937700:-1
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reference: sequence
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urn:…
SIO_000300: 72
SIO_000628: feature:935758-935895:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 73
SIO_000628: feature:931460-931726:-1:exon

position:931726:-1
position: 931726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109934535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109934535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein axonemal heavy chain 3-like
translation: MLPELASSLTYHSQRMVAHGQRSEGWAGMHGQAVKPVCSQTPKILQRGPLTQAAPWKEAKFYRNVSDSIANNYSPAARNYSTDHIYKLLSSCESLEQQWSDDPESSPSLRTAHHGAKAFKTKSPRTPLGRRKLSPHRLLQSASARRDHHEACSDVATQGTEFYTERPVLKLWVPGRELQALDSLPPIHRHHFKLGDSCSPQRAKWSRSPQGAGGHSEAGLVGEEMPSEETYQADWGAATEPQKQEAGPAEHCLHAECVHSDEDYTLHDEATRAALGILFISAKHSTHGLSRPATPREDQLVRYYDLIERCIDPSVVTPLSTDCLQRVYAYVPADHDTQLRHTCQRLTQEIQDAYSGAMRKAILDYVLLDPVEQQRLGIDLPPKPSNTAGRERLPWHESVKSARQKLTDALYITHPVMSSILLNFQTRYRNFRLIEAELLSQVFPFTLDQLINHVSMVTESRSIVLQDHWLKDCSEIIAKNREIVEAWMPHDNEELRMIKMDHFFASVATLTSNLLRSIVEGSLQELVQMFEVYQQGNNYEGDYPVNSLGLPVKPHPIIIFMKPQMEGSQVMFAPTIDDVIEGLNCIVDLLVTSVHQIPRIEHQLFQAVDNLEIKYISSVRKEEEMVLSAKATLQTVVTNNSHGPLRYCSLYEPYKCLLSLETDNKIEATIKKEFNLRIYTNEIEKLQTMASELSSLPVHIPLNLLLLDVSELNQWLIDHTQQLAHIIINKVISVSEKFNRRICQQYDSIVRKITNKTDSTHKLVQVQNYTDTLRGHEMLQLKDKLAVAAENLLFLMDYASLSKKDITLNGNTFSWPERISPLIRSSEMRLQREHDMAVSKLVDWQNDFTKRIAETAAWVKKFQKKDHMSEAQQYVTELEDINRRLEQFTEEKAQINNEEVLLETGHISPYHQIQNIISAKEPFEKLWKTAVQFNLLSDKWMYGPLLQVNAEDVEHEVQNLWRVSYKLTKVFSHPDLHGPFKVATTIKTKLEKFKINMPLINALCTPGIKPRHWSLMSQKVGFSIMPHDSTTLMDVMQLGLEKYLEDLNHISSQASKEYALEKALSKMEEDWDKVNFTYTCYKDTGINILAAVDDIQVLLEDHIVKTTTMKGSPFIASFEKEISAWESKLWLMHNILESWLRVQMAWLYLQPIFSSEDIHNQIPEQGKMFEVVDTNWRLIMRESVKGANAMQVISRPQMLDKLREAESLLDDIQKGLNEYLEKKRLFFPRFFFLSNDELLEILSETKDPLRVQPHLKKCFEGISQLTFSADKEITHIESAEGEKVKLVARISPAKAKDLVEKWLYEVEKGMKSSLGEVMLQAIIAYPNTSREEWVLNWPGQIVLASSIVYWTAAVSEAITQQNGLCEFLEESNKQIDDIVTLVRGKLTKMARITLAALITIDVHARDVVAKLNNLGITTTTDFNWIAQLRYYWEKENIIVRMITTAVPYGYEYLGNTGRLVITPLTDRCYRTLMGALQLNLGGAPEGPAGTGKTETCKDLAKAVAKQCVVFNCSDGLDYRAMGKFFKGLVQSGAWACFDEFNRIELEVLSVVAQQIQTIQRAVSEQVKTFVFEGTAISLDPSCTVFITMNPGYAGRAELPDNLKVLFRPVAMMVPDYALIAEISLYSMGFVNARILAAKIVAMYRLCSEQLSSQHHYDYGMRAVKSVLTAAGNLKVRYPEEKEEVLTLRSITDVNLPKFLSHDIPLFDSIISDLFPGIVLPTRHHGNLEITIREIMHGFSLQPSPWFIEKVIQIYEMMLVRHGFMLVGSPLGGKTCALKVLAGVLELLGVRGLMDEHRVQYVIINPKAISMSQLYGSFDPVSHEWSDGILANVFREHATSLTSDRKWCIFDGPVDAVWVENLNTVLDDNKKLCLMSGEIIQMSSQQNIIFEVLDLKQASPATVSRCGMIYMEPMNLGWEPLVQSWLATKLPQQLTAEQRQTVQMLCNWLLPPCLDFVQKKCNLMVQSSPMHLTVSMLKIYESLLAEIRFTEDPIGEAEEIF…
SIO_010081: LOC109934535
subclass of: SO_0000673
so part of: LOC109934535
location: complement(join(931655..931726,935758..935895,937407..937700,940264..940340,951147..951324,963361..963486,966257..966515,967342..967520,973116..973308,974837..974967,978466..978669,982461..982632,982718..982851,984209..984380,985405..985589,987768..987932,989389..989496,991602..991760,998217..998399,1001305..1001467,1006501..1006634,1011685..1011876,1014535..1014630,1018312..1018502,1025887..1026025,1026148..1026330,1028494..1028643,1028767..1028880,1029492..1029711,1035594..1035743,1036830..1037071,1042354..1042374,1044823..1045018,1049964..1050149,1052468..1052601,1052988..1053102,1055464..1055564,1057668..1057798,1065835..1066057,1069544..1069708,1073949..1074092,1076263..1076400,1077775..1077945,1081487..1081606,1085660..1085768,1086657..1086855,1104928..1105069,1114354..1114506,1149409..1149637,1149755..1149913,1156405..1156544,1157050..1157148,1160621..1160851,1177493..1177681,1178039..1178233,1184281..1184476,1185592..1185722,1186598..1186801,1208036..1208240,1211112..1211230,1213931..1214065,1225667..1225870,1227776..1227974,1228784..1228914,1230003..1230107,1236919..1237057,1286357..1286489,1287287..1287663,1324146..1324263,1325232..1325311,1336152..1336243,1338353..1338457))
location: region:931655-1338457:-1
so has part: feature:1338353-1338457:-1:exon
so has part: feature:1336152-1336243:-1:exon
so has part: feature:1325232-1325311:-1:exon
so has part: feature:1324146-1324263:-1:exon
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so has part: feature:1014535-1014630:-1:exon
so has part: feature:1011685-1011876:-1:exon
so has part: feature:1006501-1006634:-1:exon
so has part: feature:1001305-1001467:-1:exon
so has part: feature:998217-998399:-1:exon
so has part: feature:991602-991760:-1:exon
so has part: feature:989389-989496:-1:exon
so has part: feature:987768-987932:-1:exon
so has part: feature:985405-985589:-1:exon
so has part: feature:984209-984380:-1:exon
so has part: feature:982718-982851:-1:exon
so has part: feature:982461-982632:-1:exon
so has part: feature:978466-978669:-1:exon
so has part: feature:974837-974967:-1:exon
so has part: feature:973116-973308:-1:exon
so has part: feature:967342-967520:-1:exon
so has part: feature:966257-966515:-1:exon

XP_048466337.1
type: Protein
SIO_000068: ncbiprotein

position:931655:-1
position: 931655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338457:-1
position: 1338457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1338353-1338457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1336152-1336243:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1325232-1325311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1324146-1324263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1287287-1287663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286357-1286489:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1236919-1237057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230003-1230107:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1228784-1228914:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1227776-1227974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1225667-1225870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1213931-1214065:-1:exon

urn:…
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SIO_000628: feature:1211112-1211230:-1:exon

urn:…
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SIO_000628: feature:1208036-1208240:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1186598-1186801:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1185592-1185722:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1184281-1184476:-1:exon

urn:…
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SIO_000628: feature:1178039-1178233:-1:exon

urn:…
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SIO_000628: feature:1177493-1177681:-1:exon

urn:…
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SIO_000628: feature:1160621-1160851:-1:exon

urn:…
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SIO_000628: feature:1157050-1157148:-1:exon

urn:…
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SIO_000628: feature:1156405-1156544:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1149755-1149913:-1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:1104928-1105069:-1:exon

urn:…
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SIO_000628: feature:1086657-1086855:-1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:1077775-1077945:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1076263-1076400:-1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:1052988-1053102:-1:exon

urn:…
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SIO_000628: feature:1052468-1052601:-1:exon

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SIO_000628: feature:1044823-1045018:-1:exon

urn:…
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SIO_000628: feature:1042354-1042374:-1:exon

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SIO_000628: feature:1036830-1037071:-1:exon

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SIO_000628: feature:1029492-1029711:-1:exon

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SIO_000628: feature:1028767-1028880:-1:exon

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urn:…
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SIO_000628: feature:1026148-1026330:-1:exon

urn:…
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SIO_000628: feature:1025887-1026025:-1:exon

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SIO_000628: feature:1018312-1018502:-1:exon

urn:…
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SIO_000628: feature:1014535-1014630:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1011685-1011876:-1:exon

urn:…
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SIO_000628: feature:1006501-1006634:-1:exon

urn:…
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SIO_000628: feature:982461-982632:-1:exon

urn:…
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urn:…
SIO_000300: 63
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urn:…
SIO_000300: 64
SIO_000628: feature:973116-973308:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:967342-967520:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:966257-966515:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:963361-963486:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:951147-951324:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:940264-940340:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:937407-937700:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:935758-935895:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:931655-931726:-1:exon

LOC109934535
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109934535
product: dynein axonemal heavy chain 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007264478.1
SIO_010081: LOC109934535
so part of: LOC109934535
location: complement(join(982536..982632,982718..982851,984204..984380,985405..985589,987768..987932,989389..989496,991602..991760,998217..998399,1001305..1001467,1006501..1006634,1011685..1011876,1014535..1014630,1018312..1018502,1025887..1026025,1026148..1026330,1028494..1028643,1028767..1028880,1029492..1029711,1035594..1035743,1036830..1037071,1042354..1042374,1044823..1045018,1049964..1050149,1052468..1052601,1052988..1053102,1055464..1055564,1057668..1057798,1065835..1066057,1069544..1069708,1073949..1074092,1076263..1076400,1077775..1077945,1081487..1081606,1085660..1085768,1086657..1086855,1104928..1105069,1114354..1114506,1149409..1149637,1149755..1149913,1156405..1156544,1157050..1157148,1160621..1160851,1177493..1177681,1178039..1178233,1184281..1184476,1185592..1185722,1186598..1186801,1208036..1208240,1211112..1211230,1213931..1214065,1225667..1225870,1227776..1227974,1228784..1228914,1230003..1230107,1236919..1237057,1286357..1286489,1287287..1287663,1324146..1324263,1325232..1325311,1336152..1336243,1338353..1338569,1360375..1360462))
location: region:982536-1360462:-1
so has part: feature:1360375-1360462:-1:exon
so has part: feature:1338353-1338569:-1:exon
so has part: feature:1336152-1336243:-1:exon
so has part: feature:1325232-1325311:-1:exon
so has part: feature:1324146-1324263:-1:exon
so has part: feature:1287287-1287663:-1:exon
so has part: feature:1286357-1286489:-1:exon
so has part: feature:1236919-1237057:-1:exon
so has part: feature:1230003-1230107:-1:exon
so has part: feature:1228784-1228914:-1:exon
so has part: feature:1227776-1227974:-1:exon
so has part: feature:1225667-1225870:-1:exon
so has part: feature:1213931-1214065:-1:exon
so has part: feature:1211112-1211230:-1:exon
so has part: feature:1208036-1208240:-1:exon
so has part: feature:1186598-1186801:-1:exon
so has part: feature:1185592-1185722:-1:exon
so has part: feature:1184281-1184476:-1:exon
so has part: feature:1178039-1178233:-1:exon
so has part: feature:1177493-1177681:-1:exon
so has part: feature:1160621-1160851:-1:exon
so has part: feature:1157050-1157148:-1:exon
so has part: feature:1156405-1156544:-1:exon
so has part: feature:1149755-1149913:-1:exon
so has part: feature:1149409-1149637:-1:exon
so has part: feature:1114354-1114506:-1:exon
so has part: feature:1104928-1105069:-1:exon
so has part: feature:1086657-1086855:-1:exon
so has part: feature:1085660-1085768:-1:exon
so has part: feature:1081487-1081606:-1:exon
so has part: feature:1077775-1077945:-1:exon
so has part: feature:1076263-1076400:-1:exon
so has part: feature:1073949-1074092:-1:exon
so has part: feature:1069544-1069708:-1:exon
so has part: feature:1065835-1066057:-1:exon
so has part: feature:1057668-1057798:-1:exon
so has part: feature:1055464-1055564:-1:exon
so has part: feature:1052988-1053102:-1:exon
so has part: feature:1052468-1052601:-1:exon
so has part: feature:1049964-1050149:-1:exon
so has part: feature:1044823-1045018:-1:exon
so has part: feature:1042354-1042374:-1:exon
so has part: feature:1036830-1037071:-1:exon
so has part: feature:1035594-1035743:-1:exon
so has part: feature:1029492-1029711:-1:exon
so has part: feature:1028767-1028880:-1:exon
so has part: feature:1028494-1028643:-1:exon
so has part: feature:1026148-1026330:-1:exon
so has part: feature:1025887-1026025:-1:exon
so has part: feature:1018312-1018502:-1:exon
so has part: feature:1014535-1014630:-1:exon
so has part: feature:1011685-1011876:-1:exon
so has part: feature:1006501-1006634:-1:exon
so has part: feature:1001305-1001467:-1:exon
so has part: feature:998217-998399:-1:exon
so has part: feature:991602-991760:-1:exon
so has part: feature:989389-989496:-1:exon
so has part: feature:987768-987932:-1:exon
so has part: feature:985405-985589:-1:exon
so has part: feature:984204-984380:-1:exon
so has part: feature:982718-982851:-1:exon
so has part: feature:982536-982632:-1:exon

position:982536:-1
position: 982536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360375-1360462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338353-1338569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1336152-1336243:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1325232-1325311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1324146-1324263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287287-1287663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1286357-1286489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236919-1237057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230003-1230107:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1228784-1228914:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1227776-1227974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1225667-1225870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1213931-1214065:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1211112-1211230:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1208036-1208240:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1186598-1186801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1185592-1185722:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1184281-1184476:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1178039-1178233:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1177493-1177681:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1160621-1160851:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1157050-1157148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1156405-1156544:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1149755-1149913:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1149409-1149637:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1114354-1114506:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1104928-1105069:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1086657-1086855:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1085660-1085768:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1081487-1081606:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1077775-1077945:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1076263-1076400:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1073949-1074092:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1069544-1069708:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1065835-1066057:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1057668-1057798:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1055464-1055564:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1052988-1053102:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1052468-1052601:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1049964-1050149:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1044823-1045018:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1042354-1042374:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1036830-1037071:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1035594-1035743:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1029492-1029711:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1028767-1028880:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1028494-1028643:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1026148-1026330:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1025887-1026025:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1018312-1018502:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1014535-1014630:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1011685-1011876:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1006501-1006634:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1001305-1001467:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:998217-998399:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:991602-991760:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:989389-989496:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:987768-987932:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:985405-985589:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:984204-984380:-1:exon

position:984204:-1
position: 984204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:982718-982851:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:982536-982632:-1:exon

LOC125485825
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485825
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1071017..1071151)
location: region:1071017-1071151:-1
so has part: feature:1071017-1071151:-1:exon
subclass of: SO_0000623

125485825
type: Gene
SIO_000068: ncbigene

position:1071017:-1
position: 1071017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071151:-1
position: 1071151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071017-1071151:-1:exon

LOC125485825
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: snRNA
gene: LOC125485825
product: U11 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00548
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007264515.1
SIO_010081: LOC125485825
subclass of: SO_0000673
so part of: LOC125485825
location: complement(1071017..1071151)
location: region:1071017-1071151:-1
so has part: feature:1071017-1071151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1071017-1071151:-1:exon

LOC125485820
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485820
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(1341396..1341576)
location: region:1341396-1341576:-1
so has part: feature:1341396-1341576:-1:exon

125485820
type: Gene
SIO_000068: ncbigene

position:1341396:-1
position: 1341396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341576:-1
position: 1341576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341396-1341576:-1:exon

LOC125485820
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125485820
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC125485820
subclass of: SO_0000673
so part of: LOC125485820
location: complement(1341396..1341576)
location: region:1341396-1341576:-1
so has part: feature:1341396-1341576:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1341396-1341576:-1:exon

LOC125485773
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1488550..1574678
location: region:1488550-1574678:1
so has part: feature:1488550-1574678:1:exon
subclass of: SO_0000011

125485773
type: Gene
SIO_000068: ncbigene

position:1488550:1
position: 1488550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574678:1
position: 1574678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1488550-1574678:1:exon

LOC125485773
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485773
product: uncharacterized LOC125485773, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007264470.1
SIO_010081: LOC125485773
subclass of: SO_0000673
so part of: LOC125485773
location: join(1488550..1489131,1489552..1489645,1501631..1501712,1568742..1568817,1572330..1572440,1574537..1574678)
location: region:1488550-1574678:1
so has part: feature:1488550-1489131:1:exon
so has part: feature:1489552-1489645:1:exon
so has part: feature:1501631-1501712:1:exon
so has part: feature:1568742-1568817:1:exon
so has part: feature:1572330-1572440:1:exon
so has part: feature:1574537-1574678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1488550-1489131:1:exon

position:1489131:1
position: 1489131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1489552-1489645:1:exon

position:1489552:1
position: 1489552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1489645:1
position: 1489645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1501631-1501712:1:exon

position:1501631:1
position: 1501631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501712:1
position: 1501712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1568742-1568817:1:exon

position:1568742:1
position: 1568742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568817:1
position: 1568817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1572330-1572440:1:exon

position:1572330:1
position: 1572330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572440:1
position: 1572440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1574537-1574678:1:exon

position:1574537:1
position: 1574537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125485773
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485773
product: uncharacterized LOC125485773, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_007264471.1
SIO_010081: LOC125485773
subclass of: SO_0000673
so part of: LOC125485773
location: join(1488550..1489131,1489552..1489645,1490390..1490637)
location: region:1488550-1490637:1
so has part: feature:1488550-1489131:1:exon
so has part: feature:1489552-1489645:1:exon
so has part: feature:1490390-1490637:1:exon

position:1490637:1
position: 1490637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1488550-1489131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1489552-1489645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1490390-1490637:1:exon

position:1490390:1
position: 1490390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nedd1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: nedd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1535552..1580358)
location: region:1535552-1580358:-1
so has part: feature:1535552-1580358:-1:exon
subclass of: SO_0000010

109929703
type: Gene
SIO_000068: ncbigene

position:1535552:-1
position: 1535552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580358:-1
position: 1580358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535552-1580358:-1:exon

nedd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nedd1
product: NEDD1 gamma-tubulin ring complex targeting factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_048610301.1
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1535552..1536726,1538665..1538731,1539001..1539148,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577784,1580194..1580350))
location: region:1535552-1580350:-1
so has part: feature:1580194-1580350:-1:exon
so has part: feature:1577642-1577784:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539001-1539148:-1:exon
so has part: feature:1538665-1538731:-1:exon
so has part: feature:1535552-1536726:-1:exon

position:1580350:-1
position: 1580350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580194-1580350:-1:exon

position:1580194:-1
position: 1580194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1577642-1577784:-1:exon

position:1577642:-1
position: 1577642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577784:-1
position: 1577784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1575922-1576016:-1:exon

position:1575922:-1
position: 1575922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576016:-1
position: 1576016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1575648-1575764:-1:exon

position:1575648:-1
position: 1575648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575764:-1
position: 1575764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1572035-1572175:-1:exon

position:1572035:-1
position: 1572035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572175:-1
position: 1572175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1567462-1567691:-1:exon

position:1567462:-1
position: 1567462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567691:-1
position: 1567691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1563292-1563493:-1:exon

position:1563292:-1
position: 1563292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563493:-1
position: 1563493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1558186-1558396:-1:exon

position:1558186:-1
position: 1558186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1558396:-1
position: 1558396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1557400-1557543:-1:exon

position:1557400:-1
position: 1557400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1557543:-1
position: 1557543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1557251-1557298:-1:exon

position:1557251:-1
position: 1557251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1557298:-1
position: 1557298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1555776-1555984:-1:exon

position:1555776:-1
position: 1555776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555984:-1
position: 1555984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1554200-1554277:-1:exon

position:1554200:-1
position: 1554200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554277:-1
position: 1554277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1545409-1545550:-1:exon

position:1545409:-1
position: 1545409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1545550:-1
position: 1545550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1539001-1539148:-1:exon

position:1539001:-1
position: 1539001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539148:-1
position: 1539148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1538665-1538731:-1:exon

position:1538665:-1
position: 1538665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1538731:-1
position: 1538731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1535552-1536726:-1:exon

position:1536726:-1
position: 1536726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nedd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nedd1
product: NEDD1 gamma-tubulin ring complex targeting factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_020529271.2
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1535624..1536726,1538665..1538731,1539001..1539148,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577784,1580220..1580350))
location: region:1535624-1580350:-1
so has part: feature:1580220-1580350:-1:exon
so has part: feature:1577642-1577784:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539001-1539148:-1:exon
so has part: feature:1538665-1538731:-1:exon
so has part: feature:1535624-1536726:-1:exon

position:1535624:-1
position: 1535624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580220-1580350:-1:exon

position:1580220:-1
position: 1580220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1577642-1577784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575922-1576016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1575648-1575764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1572035-1572175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1567462-1567691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1563292-1563493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1558186-1558396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1557400-1557543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1557251-1557298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1555776-1555984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1554200-1554277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1545409-1545550:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1539001-1539148:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1538665-1538731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1535624-1536726:-1:exon

nedd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nedd1
product: NEDD1 gamma-tubulin ring complex targeting factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048610303.1
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1535624..1536726,1538665..1538731,1539001..1539148,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577784,1580183..1580201))
location: region:1535624-1580201:-1
so has part: feature:1580183-1580201:-1:exon
so has part: feature:1577642-1577784:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539001-1539148:-1:exon
so has part: feature:1538665-1538731:-1:exon
so has part: feature:1535624-1536726:-1:exon

position:1580201:-1
position: 1580201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580183-1580201:-1:exon

position:1580183:-1
position: 1580183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1577642-1577784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575922-1576016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1575648-1575764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1572035-1572175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1567462-1567691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1563292-1563493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1558186-1558396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1557400-1557543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1557251-1557298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1555776-1555984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1554200-1554277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1545409-1545550:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1539001-1539148:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1538665-1538731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1535624-1536726:-1:exon

nedd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nedd1
product: NEDD1 gamma-tubulin ring complex targeting factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048610302.1
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1535624..1536726,1538665..1538731,1539001..1539148,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577784,1579823..1580172))
location: region:1535624-1580172:-1
so has part: feature:1579823-1580172:-1:exon
so has part: feature:1577642-1577784:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539001-1539148:-1:exon
so has part: feature:1538665-1538731:-1:exon
so has part: feature:1535624-1536726:-1:exon

position:1580172:-1
position: 1580172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1579823-1580172:-1:exon

position:1579823:-1
position: 1579823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1577642-1577784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575922-1576016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1575648-1575764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1572035-1572175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1567462-1567691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1563292-1563493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1558186-1558396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1557400-1557543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1557251-1557298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1555776-1555984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1554200-1554277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1545409-1545550:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1539001-1539148:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1538665-1538731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1535624-1536726:-1:exon

nedd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nedd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NEDD1 isoform X1
translation: MQDSIKLASCGDDIKIWDSLSMTVVEQFNPHKKPCEVTSVCWTVDNQCLVSSSSSGDKIVLSSCRSTPVPIKDLAEGKKQTCLSLNSNSKCIVSGGLDNTVNIWDIKSKRPHRTLKDHREEVSSVCFNWNDYYIASGSRSGDIIVHSVTTNISSAPFGHGKSQPVQNLKYSIFKKALLGSVHDSGAVTLWDVNTQQPYHTFENAHKAPASGLCFSPVNDLLFATVGLDKKINCYDTSSKMLLRTISVEAPLTAIDFMTDGATLTVGSIRGKIYVYDLRVTTSPLKIVSAHKKSIRCLKFQNGSVQFKSNGGKNFASRGSSTLPTAATKRTSTKVNSAPGSDSAKGIQELTALMTSAPAVKVPPVLEEKVAEANLDVKGLAHSTSLDVIPSKETENARRADNSGNFRNLDCVGRNSFGDVFSPVRDDVAGLKTNEDSMTKGNGLGFLPQLNTVFSTRSNPVGASTQEESNSNSLQGFGSPSPIKEQAPQRDMSAILSQLQSAGQDSKEPVGQENKAIGMQKSKIIEHNGQLEAARLDQLHTSVAECGTLGTPLTSSMVKTPDLCERKGREFQFPQESPVLETSTSGEKMMPTAGILKLSDKIVDALGSDGIGQQLTSIQIQLIRTMIQETLEDYKDAWHRDIINLQLEMIKQFQIQQNEIHSLLERYSINEALVAENERLREENKRLRTTF
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1536622..1536726,1538665..1538731,1539001..1539148,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577777))
location: region:1536622-1577777:-1
so has part: feature:1577642-1577777:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539001-1539148:-1:exon
so has part: feature:1538665-1538731:-1:exon
so has part: feature:1536622-1536726:-1:exon

XP_020384860.1
type: Protein
SIO_000068: ncbiprotein

position:1536622:-1
position: 1536622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577777:-1
position: 1577777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577642-1577777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1575922-1576016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575648-1575764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1572035-1572175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1567462-1567691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1563292-1563493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1558186-1558396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1557400-1557543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1557251-1557298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1555776-1555984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1554200-1554277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1545409-1545550:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1539001-1539148:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1538665-1538731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1536622-1536726:-1:exon

nedd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nedd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NEDD1 isoform X1
translation: MQDSIKLASCGDDIKIWDSLSMTVVEQFNPHKKPCEVTSVCWTVDNQCLVSSSSSGDKIVLSSCRSTPVPIKDLAEGKKQTCLSLNSNSKCIVSGGLDNTVNIWDIKSKRPHRTLKDHREEVSSVCFNWNDYYIASGSRSGDIIVHSVTTNISSAPFGHGKSQPVQNLKYSIFKKALLGSVHDSGAVTLWDVNTQQPYHTFENAHKAPASGLCFSPVNDLLFATVGLDKKINCYDTSSKMLLRTISVEAPLTAIDFMTDGATLTVGSIRGKIYVYDLRVTTSPLKIVSAHKKSIRCLKFQNGSVQFKSNGGKNFASRGSSTLPTAATKRTSTKVNSAPGSDSAKGIQELTALMTSAPAVKVPPVLEEKVAEANLDVKGLAHSTSLDVIPSKETENARRADNSGNFRNLDCVGRNSFGDVFSPVRDDVAGLKTNEDSMTKGNGLGFLPQLNTVFSTRSNPVGASTQEESNSNSLQGFGSPSPIKEQAPQRDMSAILSQLQSAGQDSKEPVGQENKAIGMQKSKIIEHNGQLEAARLDQLHTSVAECGTLGTPLTSSMVKTPDLCERKGREFQFPQESPVLETSTSGEKMMPTAGILKLSDKIVDALGSDGIGQQLTSIQIQLIRTMIQETLEDYKDAWHRDIINLQLEMIKQFQIQQNEIHSLLERYSINEALVAENERLREENKRLRTTF
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1536622..1536726,1538665..1538731,1539001..1539148,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577777))
location: region:1536622-1577777:-1
so has part: feature:1577642-1577777:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539001-1539148:-1:exon
so has part: feature:1538665-1538731:-1:exon
so has part: feature:1536622-1536726:-1:exon

XP_048466258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1577642-1577777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1575922-1576016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575648-1575764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1572035-1572175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1567462-1567691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1563292-1563493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1558186-1558396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1557400-1557543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1557251-1557298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1555776-1555984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1554200-1554277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1545409-1545550:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1539001-1539148:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1538665-1538731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1536622-1536726:-1:exon

nedd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nedd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NEDD1 isoform X1
translation: MQDSIKLASCGDDIKIWDSLSMTVVEQFNPHKKPCEVTSVCWTVDNQCLVSSSSSGDKIVLSSCRSTPVPIKDLAEGKKQTCLSLNSNSKCIVSGGLDNTVNIWDIKSKRPHRTLKDHREEVSSVCFNWNDYYIASGSRSGDIIVHSVTTNISSAPFGHGKSQPVQNLKYSIFKKALLGSVHDSGAVTLWDVNTQQPYHTFENAHKAPASGLCFSPVNDLLFATVGLDKKINCYDTSSKMLLRTISVEAPLTAIDFMTDGATLTVGSIRGKIYVYDLRVTTSPLKIVSAHKKSIRCLKFQNGSVQFKSNGGKNFASRGSSTLPTAATKRTSTKVNSAPGSDSAKGIQELTALMTSAPAVKVPPVLEEKVAEANLDVKGLAHSTSLDVIPSKETENARRADNSGNFRNLDCVGRNSFGDVFSPVRDDVAGLKTNEDSMTKGNGLGFLPQLNTVFSTRSNPVGASTQEESNSNSLQGFGSPSPIKEQAPQRDMSAILSQLQSAGQDSKEPVGQENKAIGMQKSKIIEHNGQLEAARLDQLHTSVAECGTLGTPLTSSMVKTPDLCERKGREFQFPQESPVLETSTSGEKMMPTAGILKLSDKIVDALGSDGIGQQLTSIQIQLIRTMIQETLEDYKDAWHRDIINLQLEMIKQFQIQQNEIHSLLERYSINEALVAENERLREENKRLRTTF
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1536622..1536726,1538665..1538731,1539001..1539148,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577777))
location: region:1536622-1577777:-1
so has part: feature:1577642-1577777:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539001-1539148:-1:exon
so has part: feature:1538665-1538731:-1:exon
so has part: feature:1536622-1536726:-1:exon

XP_048466259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1577642-1577777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1575922-1576016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575648-1575764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1572035-1572175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1567462-1567691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1563292-1563493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1558186-1558396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1557400-1557543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1557251-1557298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1555776-1555984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1554200-1554277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1545409-1545550:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1539001-1539148:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1538665-1538731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1536622-1536726:-1:exon

nedd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nedd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NEDD1 isoform X1
translation: MQDSIKLASCGDDIKIWDSLSMTVVEQFNPHKKPCEVTSVCWTVDNQCLVSSSSSGDKIVLSSCRSTPVPIKDLAEGKKQTCLSLNSNSKCIVSGGLDNTVNIWDIKSKRPHRTLKDHREEVSSVCFNWNDYYIASGSRSGDIIVHSVTTNISSAPFGHGKSQPVQNLKYSIFKKALLGSVHDSGAVTLWDVNTQQPYHTFENAHKAPASGLCFSPVNDLLFATVGLDKKINCYDTSSKMLLRTISVEAPLTAIDFMTDGATLTVGSIRGKIYVYDLRVTTSPLKIVSAHKKSIRCLKFQNGSVQFKSNGGKNFASRGSSTLPTAATKRTSTKVNSAPGSDSAKGIQELTALMTSAPAVKVPPVLEEKVAEANLDVKGLAHSTSLDVIPSKETENARRADNSGNFRNLDCVGRNSFGDVFSPVRDDVAGLKTNEDSMTKGNGLGFLPQLNTVFSTRSNPVGASTQEESNSNSLQGFGSPSPIKEQAPQRDMSAILSQLQSAGQDSKEPVGQENKAIGMQKSKIIEHNGQLEAARLDQLHTSVAECGTLGTPLTSSMVKTPDLCERKGREFQFPQESPVLETSTSGEKMMPTAGILKLSDKIVDALGSDGIGQQLTSIQIQLIRTMIQETLEDYKDAWHRDIINLQLEMIKQFQIQQNEIHSLLERYSINEALVAENERLREENKRLRTTF
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1536622..1536726,1538665..1538731,1539001..1539148,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577777))
location: region:1536622-1577777:-1
so has part: feature:1577642-1577777:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539001-1539148:-1:exon
so has part: feature:1538665-1538731:-1:exon
so has part: feature:1536622-1536726:-1:exon

XP_048466260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1577642-1577777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1575922-1576016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575648-1575764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1572035-1572175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1567462-1567691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1563292-1563493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1558186-1558396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1557400-1557543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1557251-1557298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1555776-1555984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1554200-1554277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1545409-1545550:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1539001-1539148:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1538665-1538731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1536622-1536726:-1:exon

nedd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nedd1
product: NEDD1 gamma-tubulin ring complex targeting factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048610304.1
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1539162..1539343,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577784,1580194..1580358))
location: region:1539162-1580358:-1
so has part: feature:1580194-1580358:-1:exon
so has part: feature:1577642-1577784:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539162-1539343:-1:exon

position:1539162:-1
position: 1539162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580194-1580358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1577642-1577784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575922-1576016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1575648-1575764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1572035-1572175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1567462-1567691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1563292-1563493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1558186-1558396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1557400-1557543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1557251-1557298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1555776-1555984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1554200-1554277:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1545409-1545550:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1539162-1539343:-1:exon

position:1539343:-1
position: 1539343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nedd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nedd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NEDD1 isoform X2
translation: MQDSIKLASCGDDIKIWDSLSMTVVEQFNPHKKPCEVTSVCWTVDNQCLVSSSSSGDKIVLSSCRSTPVPIKDLAEGKKQTCLSLNSNSKCIVSGGLDNTVNIWDIKSKRPHRTLKDHREEVSSVCFNWNDYYIASGSRSGDIIVHSVTTNISSAPFGHGKSQPVQNLKYSIFKKALLGSVHDSGAVTLWDVNTQQPYHTFENAHKAPASGLCFSPVNDLLFATVGLDKKINCYDTSSKMLLRTISVEAPLTAIDFMTDGATLTVGSIRGKIYVYDLRVTTSPLKIVSAHKKSIRCLKFQNGSVQFKSNGGKNFASRGSSTLPTAATKRTSTKVNSAPGSDSAKGIQELTALMTSAPAVKVPPVLEEKVAEANLDVKGLAHSTSLDVIPSKETENARRADNSGNFRNLDCVGRNSFGDVFSPVRDDVAGLKTNEDSMTKGNGLGFLPQLNTVFSTRSNPVGASTQEESNSNSLQGFGSPSPIKEQAPQRDMSAILSQLQSAGQDSKEPVGQENKAIGMQKSKIIEHNGQLEAARLDQLHTSVAECGTLGTPLTSSMVKTPDLCERKGREFQFPQESPVLETSTSGQPEIHMADKKQSFYSVLFNKTLRIWTYCIPLASVLAHHYKE
SIO_010081: nedd1
subclass of: SO_0000673
so part of: nedd1
location: complement(join(1539216..1539343,1545409..1545550,1554200..1554277,1555776..1555984,1557251..1557298,1557400..1557543,1558186..1558396,1563292..1563493,1567462..1567691,1572035..1572175,1575648..1575764,1575922..1576016,1577642..1577777))
location: region:1539216-1577777:-1
so has part: feature:1577642-1577777:-1:exon
so has part: feature:1575922-1576016:-1:exon
so has part: feature:1575648-1575764:-1:exon
so has part: feature:1572035-1572175:-1:exon
so has part: feature:1567462-1567691:-1:exon
so has part: feature:1563292-1563493:-1:exon
so has part: feature:1558186-1558396:-1:exon
so has part: feature:1557400-1557543:-1:exon
so has part: feature:1557251-1557298:-1:exon
so has part: feature:1555776-1555984:-1:exon
so has part: feature:1554200-1554277:-1:exon
so has part: feature:1545409-1545550:-1:exon
so has part: feature:1539216-1539343:-1:exon

XP_048466261.1
type: Protein
SIO_000068: ncbiprotein

position:1539216:-1
position: 1539216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577642-1577777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1575922-1576016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575648-1575764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1572035-1572175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1567462-1567691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1563292-1563493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1558186-1558396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1557400-1557543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1557251-1557298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1555776-1555984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1554200-1554277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1545409-1545550:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1539216-1539343:-1:exon

LOC109929702
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109929702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1593882..1754595)
location: region:1593882-1754595:-1
so has part: feature:1593882-1754595:-1:exon
subclass of: SO_0000010

109929702
type: Gene
SIO_000068: ncbigene

position:1593882:-1
position: 1593882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754595:-1
position: 1754595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593882-1754595:-1:exon

LOC109929702
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109929702
product: cilia- and flagella-associated protein 54
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048610552.1
SIO_010081: LOC109929702
subclass of: SO_0000673
so part of: LOC109929702
location: complement(join(1593882..1594331,1600694..1600768,1605617..1605788,1607758..1607864,1609478..1609648,1611949..1612166,1614991..1615086,1622485..1622688,1630642..1630783,1637956..1638057,1642118..1642262,1660718..1660826,1665108..1665288,1668277..1668459,1684532..1684692,1689303..1689453,1698140..1698260,1699722..1699891,1713329..1713477,1724215..1724398,1729977..1730027,1745863..1745982,1747051..1747137,1751626..1751826,1754545..1754595))
location: region:1593882-1754595:-1
so has part: feature:1754545-1754595:-1:exon
so has part: feature:1751626-1751826:-1:exon
so has part: feature:1747051-1747137:-1:exon
so has part: feature:1745863-1745982:-1:exon
so has part: feature:1729977-1730027:-1:exon
so has part: feature:1724215-1724398:-1:exon
so has part: feature:1713329-1713477:-1:exon
so has part: feature:1699722-1699891:-1:exon
so has part: feature:1698140-1698260:-1:exon
so has part: feature:1689303-1689453:-1:exon
so has part: feature:1684532-1684692:-1:exon
so has part: feature:1668277-1668459:-1:exon
so has part: feature:1665108-1665288:-1:exon
so has part: feature:1660718-1660826:-1:exon
so has part: feature:1642118-1642262:-1:exon
so has part: feature:1637956-1638057:-1:exon
so has part: feature:1630642-1630783:-1:exon
so has part: feature:1622485-1622688:-1:exon
so has part: feature:1614991-1615086:-1:exon
so has part: feature:1611949-1612166:-1:exon
so has part: feature:1609478-1609648:-1:exon
so has part: feature:1607758-1607864:-1:exon
so has part: feature:1605617-1605788:-1:exon
so has part: feature:1600694-1600768:-1:exon
so has part: feature:1593882-1594331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1754545-1754595:-1:exon

position:1754545:-1
position: 1754545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1751626-1751826:-1:exon

position:1751626:-1
position: 1751626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751826:-1
position: 1751826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1747051-1747137:-1:exon

position:1747051:-1
position: 1747051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747137:-1
position: 1747137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1745863-1745982:-1:exon

position:1745863:-1
position: 1745863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745982:-1
position: 1745982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1729977-1730027:-1:exon

position:1729977:-1
position: 1729977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730027:-1
position: 1730027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1724215-1724398:-1:exon

position:1724215:-1
position: 1724215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724398:-1
position: 1724398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1713329-1713477:-1:exon

position:1713329:-1
position: 1713329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1713477:-1
position: 1713477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1699722-1699891:-1:exon

position:1699722:-1
position: 1699722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699891:-1
position: 1699891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1698140-1698260:-1:exon

position:1698140:-1
position: 1698140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698260:-1
position: 1698260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1689303-1689453:-1:exon

position:1689303:-1
position: 1689303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689453:-1
position: 1689453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1684532-1684692:-1:exon

position:1684532:-1
position: 1684532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1684692:-1
position: 1684692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1668277-1668459:-1:exon

position:1668277:-1
position: 1668277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1668459:-1
position: 1668459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1665108-1665288:-1:exon

position:1665108:-1
position: 1665108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665288:-1
position: 1665288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1660718-1660826:-1:exon

position:1660718:-1
position: 1660718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1660826:-1
position: 1660826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1642118-1642262:-1:exon

position:1642118:-1
position: 1642118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642262:-1
position: 1642262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1637956-1638057:-1:exon

position:1637956:-1
position: 1637956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1638057:-1
position: 1638057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1630642-1630783:-1:exon

position:1630642:-1
position: 1630642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1630783:-1
position: 1630783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1622485-1622688:-1:exon

position:1622485:-1
position: 1622485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1622688:-1
position: 1622688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1614991-1615086:-1:exon

position:1614991:-1
position: 1614991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615086:-1
position: 1615086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1611949-1612166:-1:exon

position:1611949:-1
position: 1611949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612166:-1
position: 1612166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1609478-1609648:-1:exon

position:1609478:-1
position: 1609478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609648:-1
position: 1609648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1607758-1607864:-1:exon

position:1607758:-1
position: 1607758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607864:-1
position: 1607864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1605617-1605788:-1:exon

position:1605617:-1
position: 1605617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605788:-1
position: 1605788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1600694-1600768:-1:exon

position:1600694:-1
position: 1600694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600768:-1
position: 1600768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1593882-1594331:-1:exon

position:1594331:-1
position: 1594331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109929702
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109929702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 54
translation: MPRAPCSTPAEAEQVSYALFRTTFPHPRSDREYVSYEIGFDCDVIELIPGIDLFSDRFRADVRSVVGSLDFLLHELYSAQQNLKVLPLFTLYQYFVSAICRDVYRSVWGRILKIRVLADLGLFAEAFDEYSFLLNGKKLPHALLEGFRSRETKVHIKFDQSRVLLTENLMAVEYLLKIPLPHNLQMLYGPYLVNKFELGRTYLAIKLAATINHIPEKAPFQCSTDSTNSDEGERIIDLDTDFVDITPESDYAQETRRTCQPHKNELDIYSLSHNLTLPQLKNIILADVQKKLNILVDKLKKEHDLIFANLAPAELEMVIDAKCQAAAVAFQNLQLAFSAAIALSAVQLLKRSRILMNVKQSNVKPPSSALRSTPVKNNPTEDQTNKNLYQDPYNMEARGRLNLNLWLKCRLVMVTALIAQVYGIRLSKGEDDFLETARLCEDGMEEAKAYGDVETQTEFMLNAVLLDLRLGCHKDRIKVLLEEIINLLSARQFLSPRAQMILAQAFLQLSDLRKSETLCNSKEAAMQEKINLCVSAQKLIFDQFPFCHPIQGTASAQLITCSAERWNMSRWQETLSCFTSALELCRETASKQIDLEADLLFQKGKILRQMTEMNYEKTLEAANFLMEAINVSYFHDQNLWLIRQSYLELVLLYFYLDKVEVKEAELGQESKATLKSGIIVVAKQPRKRITGQGRLIEILQHVLRQPSKYKMLAWIAIRAANEIIRMLRNSQILTRDKKISEESIKHLVQKELPEYVILDFLASYQDFETENDEFLPVLTTIQGEKVEKEEQRTKHVAPNETPNYVPSYRKVAQSLNSVQFLNYNNHLRRLYNINLLPIRSTVENVNGEGPNYPDPKIPFTEPSEAQMHGVDTDFLKCAIKDFGDGAHTPVFDTDLCPRLGLMHSFLKNYLPTYKNNCCAELIPIILYEIFDDSFRFSQFQPEIYTSVFGEYMLTTPTDSFVGQLTPQMSVAVHSKDKELRVQWYLPALALPPPSCETYKILLMFAYNVKPVTLVSLKTSTLTNASCGYKWIHLKRLLALQRKLSALKQKAEAYLQPEYALSTSLQYTHHRLRQRYIRNEPATNVRKLPATLEDMVLQLCKEIKELFVPGSEMKIETEVPFDLSYDTLEQLEHIFNPAVGYTLKYGSLFKWLISFLEFE
SIO_010081: LOC109929702
subclass of: SO_0000673
so part of: LOC109929702
location: complement(join(1594206..1594331,1600694..1600768,1605617..1605788,1607758..1607864,1609478..1609648,1611949..1612166,1614991..1615086,1622485..1622688,1630642..1630783,1637956..1638057,1642118..1642262,1660718..1660826,1665108..1665288,1668277..1668459,1684532..1684692,1689303..1689453,1698140..1698260,1699722..1699891,1713329..1713477,1724215..1724398,1729977..1730027,1745863..1745982,1747051..1747137,1751626..1751826,1754545..1754595))
location: region:1594206-1754595:-1
so has part: feature:1754545-1754595:-1:exon
so has part: feature:1751626-1751826:-1:exon
so has part: feature:1747051-1747137:-1:exon
so has part: feature:1745863-1745982:-1:exon
so has part: feature:1729977-1730027:-1:exon
so has part: feature:1724215-1724398:-1:exon
so has part: feature:1713329-1713477:-1:exon
so has part: feature:1699722-1699891:-1:exon
so has part: feature:1698140-1698260:-1:exon
so has part: feature:1689303-1689453:-1:exon
so has part: feature:1684532-1684692:-1:exon
so has part: feature:1668277-1668459:-1:exon
so has part: feature:1665108-1665288:-1:exon
so has part: feature:1660718-1660826:-1:exon
so has part: feature:1642118-1642262:-1:exon
so has part: feature:1637956-1638057:-1:exon
so has part: feature:1630642-1630783:-1:exon
so has part: feature:1622485-1622688:-1:exon
so has part: feature:1614991-1615086:-1:exon
so has part: feature:1611949-1612166:-1:exon
so has part: feature:1609478-1609648:-1:exon
so has part: feature:1607758-1607864:-1:exon
so has part: feature:1605617-1605788:-1:exon
so has part: feature:1600694-1600768:-1:exon
so has part: feature:1594206-1594331:-1:exon

XP_048466509.1
type: Protein
SIO_000068: ncbiprotein

position:1594206:-1
position: 1594206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754545-1754595:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1751626-1751826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1747051-1747137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1745863-1745982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1729977-1730027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1724215-1724398:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1713329-1713477:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1699722-1699891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1698140-1698260:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1689303-1689453:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1684532-1684692:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1668277-1668459:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1665108-1665288:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1660718-1660826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1642118-1642262:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1637956-1638057:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1630642-1630783:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1622485-1622688:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1614991-1615086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1611949-1612166:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1609478-1609648:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1607758-1607864:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1605617-1605788:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1600694-1600768:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1594206-1594331:-1:exon

LOC109934893
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109934893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1794912..1966928)
location: region:1794912-1966928:-1
so has part: feature:1794912-1966928:-1:exon
subclass of: SO_0000010

109934893
type: Gene
SIO_000068: ncbigene

position:1794912:-1
position: 1794912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966928:-1
position: 1966928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794912-1966928:-1:exon

LOC109934893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109934893
product: cilia- and flagella-associated protein 54-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048610553.1
SIO_010081: LOC109934893
subclass of: SO_0000673
so part of: LOC109934893
location: complement(join(1794912..1794970,1798785..1798888,1801106..1801206,1806703..1806799,1813190..1813316,1814480..1814563,1817825..1817924,1819319..1819456,1824447..1824569,1828217..1828372,1831436..1831583,1844572..1844711,1847653..1847838,1849460..1849552,1858813..1858989,1886290..1886411,1889679..1889756,1896456..1896630,1900836..1900961,1906596..1906699,1916790..1916940,1918835..1918972,1925462..1925556,1928282..1928405,1929653..1929765,1939797..1939851,1940145..1940279,1957090..1957332,1959311..1959412,1959504..1959617,1961768..1961911,1964449..1964507,1966796..1966928))
location: region:1794912-1966928:-1
so has part: feature:1966796-1966928:-1:exon
so has part: feature:1964449-1964507:-1:exon
so has part: feature:1961768-1961911:-1:exon
so has part: feature:1959504-1959617:-1:exon
so has part: feature:1959311-1959412:-1:exon
so has part: feature:1957090-1957332:-1:exon
so has part: feature:1940145-1940279:-1:exon
so has part: feature:1939797-1939851:-1:exon
so has part: feature:1929653-1929765:-1:exon
so has part: feature:1928282-1928405:-1:exon
so has part: feature:1925462-1925556:-1:exon
so has part: feature:1918835-1918972:-1:exon
so has part: feature:1916790-1916940:-1:exon
so has part: feature:1906596-1906699:-1:exon
so has part: feature:1900836-1900961:-1:exon
so has part: feature:1896456-1896630:-1:exon
so has part: feature:1889679-1889756:-1:exon
so has part: feature:1886290-1886411:-1:exon
so has part: feature:1858813-1858989:-1:exon
so has part: feature:1849460-1849552:-1:exon
so has part: feature:1847653-1847838:-1:exon
so has part: feature:1844572-1844711:-1:exon
so has part: feature:1831436-1831583:-1:exon
so has part: feature:1828217-1828372:-1:exon
so has part: feature:1824447-1824569:-1:exon
so has part: feature:1819319-1819456:-1:exon
so has part: feature:1817825-1817924:-1:exon
so has part: feature:1814480-1814563:-1:exon
so has part: feature:1813190-1813316:-1:exon
so has part: feature:1806703-1806799:-1:exon
so has part: feature:1801106-1801206:-1:exon
so has part: feature:1798785-1798888:-1:exon
so has part: feature:1794912-1794970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1966796-1966928:-1:exon

position:1966796:-1
position: 1966796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1964449-1964507:-1:exon

position:1964449:-1
position: 1964449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1964507:-1
position: 1964507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1961768-1961911:-1:exon

position:1961768:-1
position: 1961768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961911:-1
position: 1961911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1959504-1959617:-1:exon

position:1959504:-1
position: 1959504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1959617:-1
position: 1959617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1959311-1959412:-1:exon

position:1959311:-1
position: 1959311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1959412:-1
position: 1959412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1957090-1957332:-1:exon

position:1957090:-1
position: 1957090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1957332:-1
position: 1957332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1940145-1940279:-1:exon

position:1940145:-1
position: 1940145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940279:-1
position: 1940279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1939797-1939851:-1:exon

position:1939797:-1
position: 1939797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1939851:-1
position: 1939851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1929653-1929765:-1:exon

position:1929653:-1
position: 1929653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1929765:-1
position: 1929765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1928282-1928405:-1:exon

position:1928282:-1
position: 1928282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928405:-1
position: 1928405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1925462-1925556:-1:exon

position:1925462:-1
position: 1925462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925556:-1
position: 1925556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1918835-1918972:-1:exon

position:1918835:-1
position: 1918835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1918972:-1
position: 1918972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1916790-1916940:-1:exon

position:1916790:-1
position: 1916790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1916940:-1
position: 1916940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1906596-1906699:-1:exon

position:1906596:-1
position: 1906596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906699:-1
position: 1906699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1900836-1900961:-1:exon

position:1900836:-1
position: 1900836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900961:-1
position: 1900961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1896456-1896630:-1:exon

position:1896456:-1
position: 1896456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1896630:-1
position: 1896630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1889679-1889756:-1:exon

position:1889679:-1
position: 1889679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1889756:-1
position: 1889756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1886290-1886411:-1:exon

position:1886290:-1
position: 1886290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886411:-1
position: 1886411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1858813-1858989:-1:exon

position:1858813:-1
position: 1858813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858989:-1
position: 1858989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1849460-1849552:-1:exon

position:1849460:-1
position: 1849460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1849552:-1
position: 1849552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1847653-1847838:-1:exon

position:1847653:-1
position: 1847653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1847838:-1
position: 1847838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1844572-1844711:-1:exon

position:1844572:-1
position: 1844572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1844711:-1
position: 1844711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1831436-1831583:-1:exon

position:1831436:-1
position: 1831436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1831583:-1
position: 1831583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1828217-1828372:-1:exon

position:1828217:-1
position: 1828217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828372:-1
position: 1828372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1824447-1824569:-1:exon

position:1824447:-1
position: 1824447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1824569:-1
position: 1824569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1819319-1819456:-1:exon

position:1819319:-1
position: 1819319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1819456:-1
position: 1819456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1817825-1817924:-1:exon

position:1817825:-1
position: 1817825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817924:-1
position: 1817924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1814480-1814563:-1:exon

position:1814480:-1
position: 1814480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814563:-1
position: 1814563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1813190-1813316:-1:exon

position:1813190:-1
position: 1813190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1813316:-1
position: 1813316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1806703-1806799:-1:exon

position:1806703:-1
position: 1806703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806799:-1
position: 1806799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1801106-1801206:-1:exon

position:1801106:-1
position: 1801106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1801206:-1
position: 1801206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1798785-1798888:-1:exon

position:1798785:-1
position: 1798785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798888:-1
position: 1798888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1794912-1794970:-1:exon

position:1794970:-1
position: 1794970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109934893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109934893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 54-like
translation: MVKEADSRLLKLDSQRKCTSILKFLRLTMQVALPKEQLCWLIYNGTTYIYTICRHLMVLTLYTKAFEFLLWASICMETSIPLSTVRYLRWRTTLYTAVCQCYYDCASDLTAEVFARRALGKISELSQLETMNPSPQTPEVGKAFREATVKVSVMIFKRAVFEGRRKPKGILRPMQRTNYKESQNDLPHHVPAGIGYVATFGAPTVSMDDITSAAARYATSGTANAINTAADAAASVSEADSTDIEDAAATNIQDLLAYVAPPTADRQMQAPDKHGIGYLQDTLVDSGHQMLQGSSGDPWKKPEANKFRAVLSSYLSCSSAAQRLTADQCEDGVSVEAAVRFAKTAFCYEYLEVFDIIIAPLLSFLRKNENLGWKNYELDLDLLIAMEPFISPRKPKHGLPVGGTCSIGGTLQPTGATILCDDLVILAEAVFAYTCTPPEGPIPDVDMAVDAVLFLWQKCKTVLQRGNFGVTGSTKYLKKLDNLGKWMHILSILQEVTIWCNLGDVDPVLMVDITLYSAGLLETLADASVKSKRKPGDIATRETQSDTATSSQTPAISMQTEHCTPTKVLVKHPAEQLDLACKMLEKALDSICTARSATIPTKKSLIDNSRIKVEVNSFHSNIQPDEQEEEDIPQDDSYKTTPLQSFIVDLHLELIQVYYRVAFKFLKMSNELLNSENATSHETIGTDASYGFTILKEADIIKKVKKNNMLKAMFLIQKVMYLFSKEQDQSSKYQLLEKAATLLQKVETEEEILYSLRTKPTLTDNEELDVVPAPILLSRTHNSVIFKPAHFPSSKEVYWYRIFGRTATGSILKVRLKDSYLQGTGQEVPTFGECLLEVKGLEPNEKYIFAVAAYSEDGTIIGNGIGKTTKPILAYYSLPILTAWTYLCQVAYQLGHYPVSKAAFSILWKHFVTQGCLQQNKYLVTDKTDWCISQKSLNYVAVSLASPILLRSFLASIFIDSDISCQEDAVYCDSLSDNGPLYNGQLSRLAKCERILVAIKLASWINDVNQALQAVVQCYGLLAPLIFHRIPSIPVVQILIKCLCVLQHVIGVTKQRKQAGVTESLQHMTACITYYLAKILRFWKEYNLALEVVVIGKKILQSASQEISTEQKTGGVEEEAESIKNKWESTIEKQKLAIESSMQVKAMDNITSDLKKEGTTEPLTGNEAAIFMTILYAPVNTAYSAVKKFKDKSRFLEYFVLLLDRLVREENYASITNLVNEVVGILGKRNNVLLGSRKAPGKKSAVRPLKNAAVVLEYHNNPSKKLKRDKATMKELLHNFINNPALKNDPNAQRKQRERLENKAKEVFQTLLGPIVRAYLHLKKFNKTYIPFWILIFLLYIILVVYS
SIO_010081: LOC109934893
subclass of: SO_0000673
so part of: LOC109934893
location: complement(join(1794912..1794970,1798785..1798888,1801106..1801206,1806703..1806799,1813190..1813316,1814480..1814563,1817825..1817924,1819319..1819456,1824447..1824569,1828217..1828372,1831436..1831583,1844572..1844711,1847653..1847838,1849460..1849552,1858813..1858989,1886290..1886411,1889679..1889756,1896456..1896630,1900836..1900961,1906596..1906699,1916790..1916940,1918835..1918972,1925462..1925556,1928282..1928405,1929653..1929765,1939797..1939851,1940145..1940279,1957090..1957332,1959311..1959412,1959504..1959617,1961768..1961911,1964449..1964507,1966796..1966928))
location: region:1794912-1966928:-1
so has part: feature:1966796-1966928:-1:exon
so has part: feature:1964449-1964507:-1:exon
so has part: feature:1961768-1961911:-1:exon
so has part: feature:1959504-1959617:-1:exon
so has part: feature:1959311-1959412:-1:exon
so has part: feature:1957090-1957332:-1:exon
so has part: feature:1940145-1940279:-1:exon
so has part: feature:1939797-1939851:-1:exon
so has part: feature:1929653-1929765:-1:exon
so has part: feature:1928282-1928405:-1:exon
so has part: feature:1925462-1925556:-1:exon
so has part: feature:1918835-1918972:-1:exon
so has part: feature:1916790-1916940:-1:exon
so has part: feature:1906596-1906699:-1:exon
so has part: feature:1900836-1900961:-1:exon
so has part: feature:1896456-1896630:-1:exon
so has part: feature:1889679-1889756:-1:exon
so has part: feature:1886290-1886411:-1:exon
so has part: feature:1858813-1858989:-1:exon
so has part: feature:1849460-1849552:-1:exon
so has part: feature:1847653-1847838:-1:exon
so has part: feature:1844572-1844711:-1:exon
so has part: feature:1831436-1831583:-1:exon
so has part: feature:1828217-1828372:-1:exon
so has part: feature:1824447-1824569:-1:exon
so has part: feature:1819319-1819456:-1:exon
so has part: feature:1817825-1817924:-1:exon
so has part: feature:1814480-1814563:-1:exon
so has part: feature:1813190-1813316:-1:exon
so has part: feature:1806703-1806799:-1:exon
so has part: feature:1801106-1801206:-1:exon
so has part: feature:1798785-1798888:-1:exon
so has part: feature:1794912-1794970:-1:exon

XP_048466510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1966796-1966928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1964449-1964507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1961768-1961911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959504-1959617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1959311-1959412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1957090-1957332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1940145-1940279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1939797-1939851:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1929653-1929765:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1928282-1928405:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1925462-1925556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1918835-1918972:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1916790-1916940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1906596-1906699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1900836-1900961:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1896456-1896630:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1889679-1889756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1886290-1886411:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1858813-1858989:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1849460-1849552:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1847653-1847838:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1844572-1844711:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1831436-1831583:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1828217-1828372:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1824447-1824569:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1819319-1819456:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1817825-1817924:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1814480-1814563:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1813190-1813316:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1806703-1806799:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1801106-1801206:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1798785-1798888:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1794912-1794970:-1:exon

LOC109925683
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2068316..2237101
location: region:2068316-2237101:1
so has part: feature:2068316-2237101:1:exon
subclass of: SO_0000010

109925683
type: Gene
SIO_000068: ncbigene

position:2068316:1
position: 2068316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2237101:1
position: 2237101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2068316-2237101:1:exon

LOC109925683
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925683
product: cyclin-dependent kinase 17
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610554.1
SIO_010081: LOC109925683
subclass of: SO_0000673
so part of: LOC109925683
location: join(2068316..2068340,2082992..2083147,2085342..2085538,2103474..2103622,2104530..2104621,2144187..2144312,2188896..2188952,2197193..2197307,2197551..2197645,2197756..2197818,2197906..2198029,2202089..2202209,2213362..2213459,2214262..2214367,2215437..2215479,2215582..2215672,2229025..2229102,2235650..2237101)
location: region:2068316-2237101:1
so has part: feature:2068316-2068340:1:exon
so has part: feature:2082992-2083147:1:exon
so has part: feature:2085342-2085538:1:exon
so has part: feature:2103474-2103622:1:exon
so has part: feature:2104530-2104621:1:exon
so has part: feature:2144187-2144312:1:exon
so has part: feature:2188896-2188952:1:exon
so has part: feature:2197193-2197307:1:exon
so has part: feature:2197551-2197645:1:exon
so has part: feature:2197756-2197818:1:exon
so has part: feature:2197906-2198029:1:exon
so has part: feature:2202089-2202209:1:exon
so has part: feature:2213362-2213459:1:exon
so has part: feature:2214262-2214367:1:exon
so has part: feature:2215437-2215479:1:exon
so has part: feature:2215582-2215672:1:exon
so has part: feature:2229025-2229102:1:exon
so has part: feature:2235650-2237101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2068316-2068340:1:exon

position:2068340:1
position: 2068340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2082992-2083147:1:exon

position:2082992:1
position: 2082992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2083147:1
position: 2083147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2085342-2085538:1:exon

position:2085342:1
position: 2085342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2085538:1
position: 2085538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2103474-2103622:1:exon

position:2103474:1
position: 2103474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2103622:1
position: 2103622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2104530-2104621:1:exon

position:2104530:1
position: 2104530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2104621:1
position: 2104621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2144187-2144312:1:exon

position:2144187:1
position: 2144187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2144312:1
position: 2144312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2188896-2188952:1:exon

position:2188896:1
position: 2188896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188952:1
position: 2188952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2197193-2197307:1:exon

position:2197193:1
position: 2197193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2197307:1
position: 2197307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2197551-2197645:1:exon

position:2197551:1
position: 2197551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2197645:1
position: 2197645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2197756-2197818:1:exon

position:2197756:1
position: 2197756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2197818:1
position: 2197818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2197906-2198029:1:exon

position:2197906:1
position: 2197906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2198029:1
position: 2198029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2202089-2202209:1:exon

position:2202089:1
position: 2202089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202209:1
position: 2202209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2213362-2213459:1:exon

position:2213362:1
position: 2213362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2213459:1
position: 2213459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2214262-2214367:1:exon

position:2214262:1
position: 2214262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214367:1
position: 2214367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2215437-2215479:1:exon

position:2215437:1
position: 2215437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2215479:1
position: 2215479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2215582-2215672:1:exon

position:2215582:1
position: 2215582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2215672:1
position: 2215672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2229025-2229102:1:exon

position:2229025:1
position: 2229025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2229102:1
position: 2229102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2235650-2237101:1:exon

position:2235650:1
position: 2235650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925683
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 17
translation: MEKMKKFKRRLSLTLRGSQTIDESLSELAEQMTIEENSNKDNVLSGAISVGFFGVHLGTPHFLDLNGCGPTIVDVNKRLSLPADIRLPDGYLEKLQMSSPPFDQPMSRRSRRASLSEIGFGKLETYVKLDKLGEGTYATVFKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYMDDCGSIMSMHNVTIFLFQILRGLAYCHKRKVLHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFYEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNEEFKAYNFPKYKPQLIINHAPRLDTDGIDLLSSFLQYQAKKRISAEDAMKHLYFKSLGTRAHTLPDGASVFSLSEIQLQKDPGYRTTSYPETAHGKNRRQSMLF
SIO_010081: LOC109925683
subclass of: SO_0000673
so part of: LOC109925683
location: join(2103496..2103622,2104530..2104621,2144187..2144312,2188896..2188952,2197193..2197307,2197551..2197645,2197756..2197818,2197906..2198029,2202089..2202209,2213362..2213459,2214262..2214367,2215437..2215479,2215582..2215672,2229025..2229102,2235650..2235687)
location: region:2103496-2235687:1
so has part: feature:2103496-2103622:1:exon
so has part: feature:2104530-2104621:1:exon
so has part: feature:2144187-2144312:1:exon
so has part: feature:2188896-2188952:1:exon
so has part: feature:2197193-2197307:1:exon
so has part: feature:2197551-2197645:1:exon
so has part: feature:2197756-2197818:1:exon
so has part: feature:2197906-2198029:1:exon
so has part: feature:2202089-2202209:1:exon
so has part: feature:2213362-2213459:1:exon
so has part: feature:2214262-2214367:1:exon
so has part: feature:2215437-2215479:1:exon
so has part: feature:2215582-2215672:1:exon
so has part: feature:2229025-2229102:1:exon
so has part: feature:2235650-2235687:1:exon

XP_048466511.1
type: Protein
SIO_000068: ncbiprotein

position:2103496:1
position: 2103496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2235687:1
position: 2235687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2103496-2103622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2104530-2104621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2144187-2144312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188896-2188952:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2197193-2197307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2197551-2197645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2197756-2197818:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2197906-2198029:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2202089-2202209:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2213362-2213459:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2214262-2214367:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2215437-2215479:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2215582-2215672:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2229025-2229102:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2235650-2235687:1:exon

LOC125485802
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2238771..2254493
location: region:2238771-2254493:1
so has part: feature:2238771-2254493:1:exon
subclass of: SO_0000011

125485802
type: Gene
SIO_000068: ncbigene

position:2238771:1
position: 2238771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2254493:1
position: 2254493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2238771-2254493:1:exon

LOC125485802
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485802
product: uncharacterized LOC125485802
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007264508.1
SIO_010081: LOC125485802
subclass of: SO_0000673
so part of: LOC125485802
location: join(2238771..2241817,2253959..2254493)
location: region:2238771-2254493:1
so has part: feature:2238771-2241817:1:exon
so has part: feature:2253959-2254493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2238771-2241817:1:exon

position:2241817:1
position: 2241817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2253959-2254493:1:exon

position:2253959:1
position: 2253959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

elk3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: elk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2272387..2328586)
location: region:2272387-2328586:-1
so has part: feature:2272387-2328586:-1:exon
subclass of: SO_0000010

109911012
type: Gene
SIO_000068: ncbigene

position:2272387:-1
position: 2272387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2328586:-1
position: 2328586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2272387-2328586:-1:exon

elk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: elk3
product: ETS transcription factor ELK3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_048610231.1
SIO_010081: elk3
subclass of: SO_0000673
so part of: elk3
location: complement(join(2272387..2272542,2275763..2276563,2290720..2290928,2328191..2328586))
location: region:2272387-2328586:-1
so has part: feature:2328191-2328586:-1:exon
so has part: feature:2290720-2290928:-1:exon
so has part: feature:2275763-2276563:-1:exon
so has part: feature:2272387-2272542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2328191-2328586:-1:exon

position:2328191:-1
position: 2328191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2290720-2290928:-1:exon

position:2290720:-1
position: 2290720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2290928:-1
position: 2290928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2275763-2276563:-1:exon

position:2275763:-1
position: 2275763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2276563:-1
position: 2276563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2272387-2272542:-1:exon

position:2272542:-1
position: 2272542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

elk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: elk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS domain-containing protein Elk-3
translation: MESAITLWQFLLQLLLDQKHEHLICWTSNDGEFKLLKAEEVAKLWGLRKNKTNMNYDKLSRALRYYYDKNIIKKVIGQKFVYKFVSFPDILKMDPHSLESSRENILLRDSDTPSISESRDHQQITLSSGRSPSRNDYIHSGLYTSFTINSLQNRSDFFKSIKMEKPEEKIARKPTSEEVRTVIRFVANKSETPVTMPISSVPSSHSPSPEAVVASSFFTALTSKTSPPLSSRHSPVASSSSNTSSSTGYQKACIIELDAFDSEQSVQPLNLSSGSKAKSPCPAEQRQSHLPKAKKPKGLEIPAPPLVITNTDAGSIALNSPALPSGSLTPAFFTAQTPNGILLTPSPLLSSIHFWSTLSPVAPLSPARLQGPGSLFQVCVNC
SIO_010081: elk3
subclass of: SO_0000673
so part of: elk3
location: complement(join(2272402..2272542,2275763..2276563,2290720..2290926))
location: region:2272402-2290926:-1
so has part: feature:2290720-2290926:-1:exon
so has part: feature:2275763-2276563:-1:exon
so has part: feature:2272402-2272542:-1:exon

XP_048466188.1
type: Protein
SIO_000068: ncbiprotein

position:2272402:-1
position: 2272402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2290926:-1
position: 2290926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2290720-2290926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2275763-2276563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2272402-2272542:-1:exon

lta4h
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: lta4h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2394321..2440086
location: region:2394321-2440086:1
so has part: feature:2394321-2440086:1:exon
subclass of: SO_0000010

109911013
type: Gene
SIO_000068: ncbigene

position:2394321:1
position: 2394321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2440086:1
position: 2440086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2394321-2440086:1:exon

lta4h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: lta4h
product: leukotriene A4 hydrolase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_020510250.2
SIO_010081: lta4h
subclass of: SO_0000673
so part of: lta4h
location: join(2394321..2394588,2399528..2399658,2404304..2404424,2409002..2409070,2411238..2411342,2413711..2413763,2416764..2416836,2419203..2419343,2419585..2419608,2421862..2421932,2429231..2429342,2436738..2436882,2438357..2438460,2440003..2440086)
location: region:2394321-2440086:1
so has part: feature:2394321-2394588:1:exon
so has part: feature:2399528-2399658:1:exon
so has part: feature:2404304-2404424:1:exon
so has part: feature:2409002-2409070:1:exon
so has part: feature:2411238-2411342:1:exon
so has part: feature:2413711-2413763:1:exon
so has part: feature:2416764-2416836:1:exon
so has part: feature:2419203-2419343:1:exon
so has part: feature:2419585-2419608:1:exon
so has part: feature:2421862-2421932:1:exon
so has part: feature:2429231-2429342:1:exon
so has part: feature:2436738-2436882:1:exon
so has part: feature:2438357-2438460:1:exon
so has part: feature:2440003-2440086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2394321-2394588:1:exon

position:2394588:1
position: 2394588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2399528-2399658:1:exon

position:2399528:1
position: 2399528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2399658:1
position: 2399658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2404304-2404424:1:exon

position:2404304:1
position: 2404304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404424:1
position: 2404424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2409002-2409070:1:exon

position:2409002:1
position: 2409002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2409070:1
position: 2409070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2411238-2411342:1:exon

position:2411238:1
position: 2411238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2411342:1
position: 2411342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2413711-2413763:1:exon

position:2413711:1
position: 2413711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413763:1
position: 2413763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2416764-2416836:1:exon

position:2416764:1
position: 2416764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416836:1
position: 2416836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2419203-2419343:1:exon

position:2419203:1
position: 2419203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2419343:1
position: 2419343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2419585-2419608:1:exon

position:2419585:1
position: 2419585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2419608:1
position: 2419608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2421862-2421932:1:exon

position:2421862:1
position: 2421862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421932:1
position: 2421932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2429231-2429342:1:exon

position:2429231:1
position: 2429231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429342:1
position: 2429342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2436738-2436882:1:exon

position:2436738:1
position: 2436738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436882:1
position: 2436882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2438357-2438460:1:exon

position:2438357:1
position: 2438357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438460:1
position: 2438460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2440003-2440086:1:exon

position:2440003:1
position: 2440003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lta4h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: lta4h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene A-4 hydrolase
translation: MPPRVLCVSGSGIVAELMDSSSCTSAADFTTRHLVLNLRVGFQSCRIAASAALTVEALRDGLSALILDTRDLKILKATVNGQEVKFSLGNKHSYKGTPLTIILPYKLLRGQQTVVEVTYETSPEASALQWLTAEQTAGKKHPYLFSQCQAIHCRSMVPCQDTPSVKSTYYARVSVPKELVALMSANHDGELVDNKDDSRKIYCFRQMVPMPSYLIALVVGSLENRVIGPRSRVWSEKEMVDAAAYEFEETETMLKKAEELMGPYVWGRYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDRSLSNVIAHEISHSWTGNLVTNKTWEDFWLNEGHTVYLERMIARSMFGEKHRQFAAIGGWKGLLEAIETFGATNLLTSLVPRLCDTDPDDAFSSVPYEKGFALLYHLEEQLGGPDIFMGFLKAYIQTFAYSSVTTEDWKKCLYTYFSDKTEILNKVDWNTWFHSPGIPPFTPQ
SIO_010081: lta4h
subclass of: SO_0000673
so part of: lta4h
location: join(2394394..2394588,2399528..2399658,2404304..2404424,2409002..2409070,2411238..2411342,2413711..2413763,2416764..2416836,2419203..2419343,2419585..2419608,2421862..2421932,2429231..2429342,2436738..2436882,2438357..2438460,2440003..2440077)
location: region:2394394-2440077:1
so has part: feature:2394394-2394588:1:exon
so has part: feature:2399528-2399658:1:exon
so has part: feature:2404304-2404424:1:exon
so has part: feature:2409002-2409070:1:exon
so has part: feature:2411238-2411342:1:exon
so has part: feature:2413711-2413763:1:exon
so has part: feature:2416764-2416836:1:exon
so has part: feature:2419203-2419343:1:exon
so has part: feature:2419585-2419608:1:exon
so has part: feature:2421862-2421932:1:exon
so has part: feature:2429231-2429342:1:exon
so has part: feature:2436738-2436882:1:exon
so has part: feature:2438357-2438460:1:exon
so has part: feature:2440003-2440077:1:exon

XP_020365839.2
type: Protein
SIO_000068: ncbiprotein

position:2394394:1
position: 2394394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2440077:1
position: 2440077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2394394-2394588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2399528-2399658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2404304-2404424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2409002-2409070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2411238-2411342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2413711-2413763:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2416764-2416836:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2419203-2419343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2419585-2419608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2421862-2421932:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2429231-2429342:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2436738-2436882:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2438357-2438460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2440003-2440077:1:exon

LOC109911017
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109911017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2446211..2474981
location: region:2446211-2474981:1
so has part: feature:2446211-2474981:1:exon
subclass of: SO_0000010

109911017
type: Gene
SIO_000068: ncbigene

position:2446211:1
position: 2446211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2474981:1
position: 2474981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2446211-2474981:1:exon

LOC109911017
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109911017
product: histidine ammonia-lyase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048610548.1
SIO_010081: LOC109911017
subclass of: SO_0000673
so part of: LOC109911017
location: join(2446211..2446508,2448084..2448138,2449447..2449468,2450507..2450581,2450665..2450737,2450900..2450966,2451046..2451083,2452870..2452995,2455673..2455812,2457850..2457897,2458597..2458744,2459314..2459409,2459502..2459560,2459652..2459732,2461161..2461226,2462970..2463135,2466098..2466232,2469755..2469863,2471061..2471130,2473119..2474981)
location: region:2446211-2474981:1
so has part: feature:2446211-2446508:1:exon
so has part: feature:2448084-2448138:1:exon
so has part: feature:2449447-2449468:1:exon
so has part: feature:2450507-2450581:1:exon
so has part: feature:2450665-2450737:1:exon
so has part: feature:2450900-2450966:1:exon
so has part: feature:2451046-2451083:1:exon
so has part: feature:2452870-2452995:1:exon
so has part: feature:2455673-2455812:1:exon
so has part: feature:2457850-2457897:1:exon
so has part: feature:2458597-2458744:1:exon
so has part: feature:2459314-2459409:1:exon
so has part: feature:2459502-2459560:1:exon
so has part: feature:2459652-2459732:1:exon
so has part: feature:2461161-2461226:1:exon
so has part: feature:2462970-2463135:1:exon
so has part: feature:2466098-2466232:1:exon
so has part: feature:2469755-2469863:1:exon
so has part: feature:2471061-2471130:1:exon
so has part: feature:2473119-2474981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2446211-2446508:1:exon

position:2446508:1
position: 2446508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2448084-2448138:1:exon

position:2448084:1
position: 2448084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2448138:1
position: 2448138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2449447-2449468:1:exon

position:2449447:1
position: 2449447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449468:1
position: 2449468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2450507-2450581:1:exon

position:2450507:1
position: 2450507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2450581:1
position: 2450581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2450665-2450737:1:exon

position:2450665:1
position: 2450665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2450737:1
position: 2450737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2450900-2450966:1:exon

position:2450900:1
position: 2450900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2450966:1
position: 2450966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2451046-2451083:1:exon

position:2451046:1
position: 2451046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2451083:1
position: 2451083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2452870-2452995:1:exon

position:2452870:1
position: 2452870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2452995:1
position: 2452995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2455673-2455812:1:exon

position:2455673:1
position: 2455673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455812:1
position: 2455812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2457850-2457897:1:exon

position:2457850:1
position: 2457850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457897:1
position: 2457897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2458597-2458744:1:exon

position:2458597:1
position: 2458597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458744:1
position: 2458744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2459314-2459409:1:exon

position:2459314:1
position: 2459314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2459409:1
position: 2459409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2459502-2459560:1:exon

position:2459502:1
position: 2459502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2459560:1
position: 2459560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2459652-2459732:1:exon

position:2459652:1
position: 2459652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2459732:1
position: 2459732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2461161-2461226:1:exon

position:2461161:1
position: 2461161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461226:1
position: 2461226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2462970-2463135:1:exon

position:2462970:1
position: 2462970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463135:1
position: 2463135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2466098-2466232:1:exon

position:2466098:1
position: 2466098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466232:1
position: 2466232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2469755-2469863:1:exon

position:2469755:1
position: 2469755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2469863:1
position: 2469863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2471061-2471130:1:exon

position:2471061:1
position: 2471061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2471130:1
position: 2471130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2473119-2474981:1:exon

position:2473119:1
position: 2473119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109911017
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109911017
product: histidine ammonia-lyase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048610547.1
SIO_010081: LOC109911017
subclass of: SO_0000673
so part of: LOC109911017
location: join(2447197..2447443,2448084..2448138,2449447..2449468,2450507..2450581,2450665..2450737,2450900..2450966,2451046..2451083,2452870..2452995,2455673..2455812,2457850..2457897,2458597..2458744,2459314..2459409,2459502..2459560,2459652..2459732,2461161..2461226,2462970..2463135,2466098..2466232,2469755..2469863,2471061..2471130,2473119..2474981)
location: region:2447197-2474981:1
so has part: feature:2447197-2447443:1:exon
so has part: feature:2448084-2448138:1:exon
so has part: feature:2449447-2449468:1:exon
so has part: feature:2450507-2450581:1:exon
so has part: feature:2450665-2450737:1:exon
so has part: feature:2450900-2450966:1:exon
so has part: feature:2451046-2451083:1:exon
so has part: feature:2452870-2452995:1:exon
so has part: feature:2455673-2455812:1:exon
so has part: feature:2457850-2457897:1:exon
so has part: feature:2458597-2458744:1:exon
so has part: feature:2459314-2459409:1:exon
so has part: feature:2459502-2459560:1:exon
so has part: feature:2459652-2459732:1:exon
so has part: feature:2461161-2461226:1:exon
so has part: feature:2462970-2463135:1:exon
so has part: feature:2466098-2466232:1:exon
so has part: feature:2469755-2469863:1:exon
so has part: feature:2471061-2471130:1:exon
so has part: feature:2473119-2474981:1:exon

position:2447197:1
position: 2447197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2447197-2447443:1:exon

position:2447443:1
position: 2447443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2448084-2448138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2449447-2449468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2450507-2450581:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2450665-2450737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2450900-2450966:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2451046-2451083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2452870-2452995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2455673-2455812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2457850-2457897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2458597-2458744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2459314-2459409:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2459502-2459560:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2459652-2459732:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2461161-2461226:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462970-2463135:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2466098-2466232:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2469755-2469863:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2471061-2471130:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2473119-2474981:1:exon

LOC109911017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109911017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine ammonia-lyase-like isoform X1
translation: MLCFTVCVRQKWMIIPCKDPSLNIHWLGQEALTRYREREVYCGDLHCIDDVKFSVRRCQGLGLLDPGDTIRDVLENNDFIQIVIQGDTDEPDPLTSDMASQQHQGTQQYIYLDGNSLTTKQLVQLGEACYKIKLTSEAERRVNESRDLVEKIINKGQVEYGINTGFGKFARTVIPHEKLKQLQENVILSAAVGVGDPLSPKRTRMLLALRINVLAKGYSGISLETLDQIIQAFNVSCLSYVPEKGTVGASGDLAPLAHLALGLMGEGKMWSPKSGWADAKYVLQAYGLRPISLKAKEGLALINGTQMITSLGVEAVERATAIARQADIIAAITLEVLKGTTRAFDSDVHDLRPHPGQIEVAARFRSVLHSDVHPSEIAESHRFCGRVQDAYTLRCCPQIHGVANDTIRFVKSILVTEMNSVTDNPIVLVDRGEVISCGNFHGEYPAKALDYLAIGVHELASISERRIERLCNASLTELPAFLVSDGGLNSGFMIPHCTAAALVSENKVLCHPSSVDSLSTSAATEDHVSMGGWAARKALRVIDHVEQVLAIELLAACQGLEFLRPLHTTEPLESVYKLVRSAVKPLVKDRFMAPDFEFAHKLLIEEKVWKTVQPYIEHSGSPQAAE
SIO_010081: LOC109911017
subclass of: SO_0000673
so part of: LOC109911017
location: join(2447197..2447443,2448084..2448138,2449447..2449468,2450507..2450581,2450665..2450737,2450900..2450966,2451046..2451083,2452870..2452995,2455673..2455812,2457850..2457897,2458597..2458744,2459314..2459409,2459502..2459560,2459652..2459732,2461161..2461226,2462970..2463135,2466098..2466232,2469755..2469863,2471061..2471130,2473119..2473178)
location: region:2447197-2473178:1
so has part: feature:2447197-2447443:1:exon
so has part: feature:2448084-2448138:1:exon
so has part: feature:2449447-2449468:1:exon
so has part: feature:2450507-2450581:1:exon
so has part: feature:2450665-2450737:1:exon
so has part: feature:2450900-2450966:1:exon
so has part: feature:2451046-2451083:1:exon
so has part: feature:2452870-2452995:1:exon
so has part: feature:2455673-2455812:1:exon
so has part: feature:2457850-2457897:1:exon
so has part: feature:2458597-2458744:1:exon
so has part: feature:2459314-2459409:1:exon
so has part: feature:2459502-2459560:1:exon
so has part: feature:2459652-2459732:1:exon
so has part: feature:2461161-2461226:1:exon
so has part: feature:2462970-2463135:1:exon
so has part: feature:2466098-2466232:1:exon
so has part: feature:2469755-2469863:1:exon
so has part: feature:2471061-2471130:1:exon
so has part: feature:2473119-2473178:1:exon

XP_048466504.1
type: Protein
SIO_000068: ncbiprotein

position:2473178:1
position: 2473178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2447197-2447443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2448084-2448138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2449447-2449468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2450507-2450581:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2450665-2450737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2450900-2450966:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2451046-2451083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2452870-2452995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2455673-2455812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2457850-2457897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2458597-2458744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2459314-2459409:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2459502-2459560:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2459652-2459732:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2461161-2461226:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462970-2463135:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2466098-2466232:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2469755-2469863:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2471061-2471130:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2473119-2473178:1:exon

LOC109911017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109911017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine ammonia-lyase-like isoform X2
translation: MASQQHQGTQQYIYLDGNSLTTKQLVQLGEACYKIKLTSEAERRVNESRDLVEKIINKGQVEYGINTGFGKFARTVIPHEKLKQLQENVILSAAVGVGDPLSPKRTRMLLALRINVLAKGYSGISLETLDQIIQAFNVSCLSYVPEKGTVGASGDLAPLAHLALGLMGEGKMWSPKSGWADAKYVLQAYGLRPISLKAKEGLALINGTQMITSLGVEAVERATAIARQADIIAAITLEVLKGTTRAFDSDVHDLRPHPGQIEVAARFRSVLHSDVHPSEIAESHRFCGRVQDAYTLRCCPQIHGVANDTIRFVKSILVTEMNSVTDNPIVLVDRGEVISCGNFHGEYPAKALDYLAIGVHELASISERRIERLCNASLTELPAFLVSDGGLNSGFMIPHCTAAALVSENKVLCHPSSVDSLSTSAATEDHVSMGGWAARKALRVIDHVEQVLAIELLAACQGLEFLRPLHTTEPLESVYKLVRSAVKPLVKDRFMAPDFEFAHKLLIEEKVWKTVQPYIEHSGSPQAAE
SIO_010081: LOC109911017
subclass of: SO_0000673
so part of: LOC109911017
location: join(2448128..2448138,2449447..2449468,2450507..2450581,2450665..2450737,2450900..2450966,2451046..2451083,2452870..2452995,2455673..2455812,2457850..2457897,2458597..2458744,2459314..2459409,2459502..2459560,2459652..2459732,2461161..2461226,2462970..2463135,2466098..2466232,2469755..2469863,2471061..2471130,2473119..2473178)
location: region:2448128-2473178:1
so has part: feature:2448128-2448138:1:exon
so has part: feature:2449447-2449468:1:exon
so has part: feature:2450507-2450581:1:exon
so has part: feature:2450665-2450737:1:exon
so has part: feature:2450900-2450966:1:exon
so has part: feature:2451046-2451083:1:exon
so has part: feature:2452870-2452995:1:exon
so has part: feature:2455673-2455812:1:exon
so has part: feature:2457850-2457897:1:exon
so has part: feature:2458597-2458744:1:exon
so has part: feature:2459314-2459409:1:exon
so has part: feature:2459502-2459560:1:exon
so has part: feature:2459652-2459732:1:exon
so has part: feature:2461161-2461226:1:exon
so has part: feature:2462970-2463135:1:exon
so has part: feature:2466098-2466232:1:exon
so has part: feature:2469755-2469863:1:exon
so has part: feature:2471061-2471130:1:exon
so has part: feature:2473119-2473178:1:exon

XP_048466505.1
type: Protein
SIO_000068: ncbiprotein

position:2448128:1
position: 2448128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2448128-2448138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2449447-2449468:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2450507-2450581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2450665-2450737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2450900-2450966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2451046-2451083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2452870-2452995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2455673-2455812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2457850-2457897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2458597-2458744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2459314-2459409:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2459502-2459560:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2459652-2459732:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2461161-2461226:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2462970-2463135:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2466098-2466232:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2469755-2469863:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2471061-2471130:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2473119-2473178:1:exon

hal
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: hal
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2479544..2524622
location: region:2479544-2524622:1
so has part: feature:2479544-2524622:1:exon
subclass of: SO_0000010

109911015
type: Gene
SIO_000068: ncbigene

position:2479544:1
position: 2479544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2524622:1
position: 2524622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2479544-2524622:1:exon

hal
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hal
product: histidine ammonia-lyase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020510251.2
SIO_010081: hal
subclass of: SO_0000673
so part of: hal
location: join(2479544..2479863,2480352..2480412,2480774..2480801,2487653..2487727,2487831..2487903,2488154..2488220,2489158..2489195,2489292..2489417,2494904..2495043,2499984..2500031,2506499..2506646,2508491..2508586,2508686..2508744,2510675..2510755,2512095..2512160,2513227..2513392,2517496..2517630,2521282..2521390,2521494..2521563,2523942..2524622)
location: region:2479544-2524622:1
so has part: feature:2479544-2479863:1:exon
so has part: feature:2480352-2480412:1:exon
so has part: feature:2480774-2480801:1:exon
so has part: feature:2487653-2487727:1:exon
so has part: feature:2487831-2487903:1:exon
so has part: feature:2488154-2488220:1:exon
so has part: feature:2489158-2489195:1:exon
so has part: feature:2489292-2489417:1:exon
so has part: feature:2494904-2495043:1:exon
so has part: feature:2499984-2500031:1:exon
so has part: feature:2506499-2506646:1:exon
so has part: feature:2508491-2508586:1:exon
so has part: feature:2508686-2508744:1:exon
so has part: feature:2510675-2510755:1:exon
so has part: feature:2512095-2512160:1:exon
so has part: feature:2513227-2513392:1:exon
so has part: feature:2517496-2517630:1:exon
so has part: feature:2521282-2521390:1:exon
so has part: feature:2521494-2521563:1:exon
so has part: feature:2523942-2524622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2479544-2479863:1:exon

position:2479863:1
position: 2479863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2480352-2480412:1:exon

position:2480352:1
position: 2480352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2480412:1
position: 2480412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2480774-2480801:1:exon

position:2480774:1
position: 2480774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2480801:1
position: 2480801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2487653-2487727:1:exon

position:2487653:1
position: 2487653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487727:1
position: 2487727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2487831-2487903:1:exon

position:2487831:1
position: 2487831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487903:1
position: 2487903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2488154-2488220:1:exon

position:2488154:1
position: 2488154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2488220:1
position: 2488220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2489158-2489195:1:exon

position:2489158:1
position: 2489158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489195:1
position: 2489195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2489292-2489417:1:exon

position:2489292:1
position: 2489292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489417:1
position: 2489417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2494904-2495043:1:exon

position:2494904:1
position: 2494904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495043:1
position: 2495043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2499984-2500031:1:exon

position:2499984:1
position: 2499984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2500031:1
position: 2500031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2506499-2506646:1:exon

position:2506499:1
position: 2506499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506646:1
position: 2506646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2508491-2508586:1:exon

position:2508491:1
position: 2508491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508586:1
position: 2508586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2508686-2508744:1:exon

position:2508686:1
position: 2508686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508744:1
position: 2508744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2510675-2510755:1:exon

position:2510675:1
position: 2510675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2510755:1
position: 2510755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2512095-2512160:1:exon

position:2512095:1
position: 2512095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512160:1
position: 2512160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2513227-2513392:1:exon

position:2513227:1
position: 2513227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513392:1
position: 2513392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2517496-2517630:1:exon

position:2517496:1
position: 2517496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517630:1
position: 2517630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2521282-2521390:1:exon

position:2521282:1
position: 2521282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2521390:1
position: 2521390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2521494-2521563:1:exon

position:2521494:1
position: 2521494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2521563:1
position: 2521563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2523942-2524622:1:exon

position:2523942:1
position: 2523942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hal
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hal
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine ammonia-lyase
translation: MARFTVHVRGEWLTVPCKDTSVNVAWLAAEAIRRYVKNKPDSGGVKAGSSPRFVVRRCQGLGSLDPDDVVHDVLEDNEFIEIVLEEDVMSPEFIPSQPERIHQYSKYQEPTEYICLDGKHLTIEDLVQLGRGLYKIKLTAEAEERIKQSRLLLESIVKENKVVYGITTGFGKFARTVIPHNKLKELQENLVRSHSAGVGKPLSPKRSRMLLALRINVLAKGYSGISLETLHQMIQAFNASCLSYVPEKGTVGASGDLAPLAHLALGLMGEGKMWSPKSGWADAKYVLQAHGLKPVSLKPKEGLALINGTQMITSLGAEAVERATAIARQADIIAALTLEVLKGTTRAFDSDIHELRPHPGQMEVAFRFRSLLGSDHHPSEIAESHRFCDRVQDAYTLRCCPQVHGVVNDTITFVKTIIETEINSATDNPMVFAERGETISGGNFHGEYPAKALDYLAIGVHELAAISERRIERLCNPSLSELPAFLVNEGGLNSGFMIAHCTAAALVSENKVLCHPSSVDSLSTSAATEDHVSMGGWAARKALRVIEHVEQVLAIELLAACQGIEFLRPLKTTTPLEKVYDLVRTVVRPWIKDRFMAPDIDVVHRLLVEQKVWEVAHPYIEKYRSANLPEARPISPTAFTLEPPVSPHKKARIE
SIO_010081: hal
subclass of: SO_0000673
so part of: hal
location: join(2479617..2479863,2480352..2480412,2480774..2480801,2487653..2487727,2487831..2487903,2488154..2488220,2489158..2489195,2489292..2489417,2494904..2495043,2499984..2500031,2506499..2506646,2508491..2508586,2508686..2508744,2510675..2510755,2512095..2512160,2513227..2513392,2517496..2517630,2521282..2521390,2521494..2521563,2523942..2524073)
location: region:2479617-2524073:1
so has part: feature:2479617-2479863:1:exon
so has part: feature:2480352-2480412:1:exon
so has part: feature:2480774-2480801:1:exon
so has part: feature:2487653-2487727:1:exon
so has part: feature:2487831-2487903:1:exon
so has part: feature:2488154-2488220:1:exon
so has part: feature:2489158-2489195:1:exon
so has part: feature:2489292-2489417:1:exon
so has part: feature:2494904-2495043:1:exon
so has part: feature:2499984-2500031:1:exon
so has part: feature:2506499-2506646:1:exon
so has part: feature:2508491-2508586:1:exon
so has part: feature:2508686-2508744:1:exon
so has part: feature:2510675-2510755:1:exon
so has part: feature:2512095-2512160:1:exon
so has part: feature:2513227-2513392:1:exon
so has part: feature:2517496-2517630:1:exon
so has part: feature:2521282-2521390:1:exon
so has part: feature:2521494-2521563:1:exon
so has part: feature:2523942-2524073:1:exon

XP_020365840.2
type: Protein
SIO_000068: ncbiprotein

position:2479617:1
position: 2479617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2524073:1
position: 2524073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2479617-2479863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2480352-2480412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2480774-2480801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2487653-2487727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2487831-2487903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2488154-2488220:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2489158-2489195:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2489292-2489417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2494904-2495043:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2499984-2500031:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2506499-2506646:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2508491-2508586:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2508686-2508744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510675-2510755:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2512095-2512160:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2513227-2513392:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2517496-2517630:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2521282-2521390:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2521494-2521563:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2523942-2524073:1:exon

amdhd1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: amdhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2531115..2547123)
location: region:2531115-2547123:-1
so has part: feature:2531115-2547123:-1:exon
subclass of: SO_0000010

109911016
type: Gene
SIO_000068: ncbigene

position:2531115:-1
position: 2531115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2547123:-1
position: 2547123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531115-2547123:-1:exon

amdhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: amdhd1
product: amidohydrolase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048610450.1
SIO_010081: amdhd1
subclass of: SO_0000673
so part of: amdhd1
location: complement(join(2531115..2532472,2535913..2536073,2538709..2538802,2545076..2545200,2546903..2547123))
location: region:2531115-2547123:-1
so has part: feature:2546903-2547123:-1:exon
so has part: feature:2545076-2545200:-1:exon
so has part: feature:2538709-2538802:-1:exon
so has part: feature:2535913-2536073:-1:exon
so has part: feature:2531115-2532472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2546903-2547123:-1:exon

position:2546903:-1
position: 2546903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2545076-2545200:-1:exon

position:2545076:-1
position: 2545076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545200:-1
position: 2545200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2538709-2538802:-1:exon

position:2538709:-1
position: 2538709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2538802:-1
position: 2538802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2535913-2536073:-1:exon

position:2535913:-1
position: 2535913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2536073:-1
position: 2536073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2531115-2532472:-1:exon

position:2532472:-1
position: 2532472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

amdhd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: amdhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable imidazolonepropionase
translation: MMANREFHIDNIDVFCEKGVFDLDSTRAILQAGKEMKLQINFHGDELYPMHAAELGAELGALAISHLEEVSDAGIAAMATAKSCAVLLPSTAYILRLKTPRARDMLDAGVIVALGSDFNPNAYCFSMPMTMHLACVNMKMSMNESLAAATINAAYALGKSHSYGSLEVGKQGDLLIINAPRWEHLIYQFGGHQDLIKYVITKGKIAYENRSCLDY
SIO_010081: amdhd1
subclass of: SO_0000673
so part of: amdhd1
location: complement(join(2532367..2532472,2535913..2536073,2538709..2538802,2545076..2545200,2546903..2547064))
location: region:2532367-2547064:-1
so has part: feature:2546903-2547064:-1:exon
so has part: feature:2545076-2545200:-1:exon
so has part: feature:2538709-2538802:-1:exon
so has part: feature:2535913-2536073:-1:exon
so has part: feature:2532367-2532472:-1:exon

XP_048466407.1
type: Protein
SIO_000068: ncbiprotein

position:2532367:-1
position: 2532367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2547064:-1
position: 2547064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2546903-2547064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2545076-2545200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2538709-2538802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2535913-2536073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2532367-2532472:-1:exon

LOC125485810
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2559823..2593479
location: region:2559823-2593479:1
so has part: feature:2559823-2593479:1:exon
subclass of: SO_0000010

125485810
type: Gene
SIO_000068: ncbigene

position:2559823:1
position: 2559823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2593479:1
position: 2593479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559823-2593479:1:exon

LOC125485810
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485810
product: cilia- and flagella-associated protein 100-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048610555.1
SIO_010081: LOC125485810
subclass of: SO_0000673
so part of: LOC125485810
location: join(2559823..2559860,2563553..2563644,2567085..2567188,2568033..2568186,2574262..2574329,2581552..2581715,2584472..2584552,2585595..2585764,2587932..2588031,2592581..2592638,2593318..2593479)
location: region:2559823-2593479:1
so has part: feature:2559823-2559860:1:exon
so has part: feature:2563553-2563644:1:exon
so has part: feature:2567085-2567188:1:exon
so has part: feature:2568033-2568186:1:exon
so has part: feature:2574262-2574329:1:exon
so has part: feature:2581552-2581715:1:exon
so has part: feature:2584472-2584552:1:exon
so has part: feature:2585595-2585764:1:exon
so has part: feature:2587932-2588031:1:exon
so has part: feature:2592581-2592638:1:exon
so has part: feature:2593318-2593479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2559823-2559860:1:exon

position:2559860:1
position: 2559860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2563553-2563644:1:exon

position:2563553:1
position: 2563553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2563644:1
position: 2563644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2567085-2567188:1:exon

position:2567085:1
position: 2567085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2567188:1
position: 2567188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2568033-2568186:1:exon

position:2568033:1
position: 2568033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2568186:1
position: 2568186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2574262-2574329:1:exon

position:2574262:1
position: 2574262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2574329:1
position: 2574329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2581552-2581715:1:exon

position:2581552:1
position: 2581552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581715:1
position: 2581715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2584472-2584552:1:exon

position:2584472:1
position: 2584472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2584552:1
position: 2584552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2585595-2585764:1:exon

position:2585595:1
position: 2585595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585764:1
position: 2585764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2587932-2588031:1:exon

position:2587932:1
position: 2587932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588031:1
position: 2588031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2592581-2592638:1:exon

position:2592581:1
position: 2592581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2592638:1
position: 2592638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2593318-2593479:1:exon

position:2593318:1
position: 2593318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125485810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 100-like
translation: MATEVITNLPSLAPASGAVDKFPLLQQPNENEKQSQIHPFINPTNAIVFREKLERQQKELLNAHSGLGYLRSTFTSRRKSFSSSWRRFALEQQDEDKKNEEPKPVCFVRDESTDKAGLQEYIQQQRQLFLIQYTSGLKENSMKGLKEAALKQQQCMIEDEKKLAKKKLAIENLMVESQTKRTQAMLWAEENANDNLLATEQIEKVTEEVLNLKSLIEKQQQELDYCITAKMFFEQLTPKERKEKRKEKMVDSDVRKEAIPPDPLAITSLNEPPSRKASTLKKKGLQLTPKLSAVSVDNSWMELRAESDLEEKPMDVKPNVSPLDQELYFKDPQEILDIFFNLEEQIVSLLQYCREVEDDIDRVNQKMAATQEAMYV
SIO_010081: LOC125485810
subclass of: SO_0000673
so part of: LOC125485810
location: join(2563575..2563644,2567085..2567188,2568033..2568186,2574262..2574329,2581552..2581715,2584472..2584552,2585595..2585764,2587932..2588031,2592581..2592638,2593318..2593479)
location: region:2563575-2593479:1
so has part: feature:2563575-2563644:1:exon
so has part: feature:2567085-2567188:1:exon
so has part: feature:2568033-2568186:1:exon
so has part: feature:2574262-2574329:1:exon
so has part: feature:2581552-2581715:1:exon
so has part: feature:2584472-2584552:1:exon
so has part: feature:2585595-2585764:1:exon
so has part: feature:2587932-2588031:1:exon
so has part: feature:2592581-2592638:1:exon
so has part: feature:2593318-2593479:1:exon

XP_048466512.1
type: Protein
SIO_000068: ncbiprotein

position:2563575:1
position: 2563575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2563575-2563644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2567085-2567188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2568033-2568186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2574262-2574329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2581552-2581715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2584472-2584552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2585595-2585764:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2587932-2588031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2592581-2592638:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2593318-2593479:1:exon

LOC125485776
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2621306..2627276)
location: region:2621306-2627276:-1
so has part: feature:2621306-2627276:-1:exon
subclass of: SO_0000010

125485776
type: Gene
SIO_000068: ncbigene

position:2621306:-1
position: 2621306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2627276:-1
position: 2627276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621306-2627276:-1:exon

LOC125485776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485776
product: leukotriene A-4 hydrolase-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610347.1
SIO_010081: LOC125485776
subclass of: SO_0000673
so part of: LOC125485776
location: complement(join(2621306..2621659,2623585..2623689,2624464..2624546,2626182..2626277,2627228..2627276))
location: region:2621306-2627276:-1
so has part: feature:2627228-2627276:-1:exon
so has part: feature:2626182-2626277:-1:exon
so has part: feature:2624464-2624546:-1:exon
so has part: feature:2623585-2623689:-1:exon
so has part: feature:2621306-2621659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2627228-2627276:-1:exon

position:2627228:-1
position: 2627228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2626182-2626277:-1:exon

position:2626182:-1
position: 2626182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2626277:-1
position: 2626277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2624464-2624546:-1:exon

position:2624464:-1
position: 2624464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624546:-1
position: 2624546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2623585-2623689:-1:exon

position:2623585:-1
position: 2623585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623689:-1
position: 2623689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2621306-2621659:-1:exon

position:2621659:-1
position: 2621659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125485776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene A-4 hydrolase-like
translation: MADVCISLCKRWSIATDVELDCFTETDLKEMTSQQKIEFLALLLLEPPLRLNNVKRMQDLYKFNGVKNAEIRFRWLRLCLRAQWEKAIPLALEMVTVQGRMKFTRPLYRDLYNFEQAREQTIETFKKNKPCMHPITAALVAKDLHLV
SIO_010081: LOC125485776
subclass of: SO_0000673
so part of: LOC125485776
location: complement(join(2621542..2621659,2623585..2623689,2624464..2624546,2626182..2626277,2627228..2627269))
location: region:2621542-2627269:-1
so has part: feature:2627228-2627269:-1:exon
so has part: feature:2626182-2626277:-1:exon
so has part: feature:2624464-2624546:-1:exon
so has part: feature:2623585-2623689:-1:exon
so has part: feature:2621542-2621659:-1:exon

XP_048466304.1
type: Protein
SIO_000068: ncbiprotein

position:2621542:-1
position: 2621542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2627269:-1
position: 2627269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2627228-2627269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2626182-2626277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2624464-2624546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2623585-2623689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2621542-2621659:-1:exon

usp44
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: usp44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2641807..2651568)
location: region:2641807-2651568:-1
so has part: feature:2641807-2651568:-1:exon
subclass of: SO_0000010

109921244
type: Gene
SIO_000068: ncbigene

position:2641807:-1
position: 2641807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2651568:-1
position: 2651568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2641807-2651568:-1:exon

usp44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: usp44
product: ubiquitin specific peptidase 44
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_048610556.1
SIO_010081: usp44
subclass of: SO_0000673
so part of: usp44
location: complement(join(2641807..2643334,2651455..2651568))
location: region:2641807-2651568:-1
so has part: feature:2651455-2651568:-1:exon
so has part: feature:2641807-2643334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2651455-2651568:-1:exon

position:2651455:-1
position: 2651455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2641807-2643334:-1:exon

position:2643334:-1
position: 2643334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

usp44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: usp44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 44
translation: MDKCKHVGRLRLAQDHSILNPQKWHCVDCNTTESMWACLSCSHVACGRYNEEHALKHFQESKHPVALEVNEFYVFCYVCDDYVLNDNATGDLKLLRSTLSAIKSQNYDCTTRSGRTLRSMAGSDDSYLSRGCAQAQLRNEDRMFTALWHRRKLLLSKVFQSWFALTSSGKLRLEEERLREEAELKREEARKRRQELKQRIHAELLSAPPRKSSRLNELSQVSDASAVRSPAKYRGVTTGLTSSTVRLKKIGDSPIKRRPTVTPGVTGLRNLGNTCYMNSILQVLSHLQIFCECFLHFDLSQTQELLASTANGKTRPSSRQYLASDINSSTSLIDEEKILRRPSLSEGLSGGASSSRNRELIQLKEPSSKHISLCHELHTLFLVMWSGKWALVSPFAMLHCVWRLIPTFRGYAQQDAQEFLCELLDKVQQELEATKTMCTAPIPISQRQLIKRVLTVVNTIFHGQLLSQVLVALPSKSLRWHFLIFDKRMM
SIO_010081: usp44
subclass of: SO_0000673
so part of: usp44
location: complement(2641807..2643279)
location: region:2641807-2643279:-1
so has part: feature:2641807-2643279:-1:exon

XP_048466513.1
type: Protein
SIO_000068: ncbiprotein

position:2643279:-1
position: 2643279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2641807-2643279:-1:exon

LOC109923360
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2643330..2725626)
location: region:2643330-2725626:-1
so has part: feature:2643330-2725626:-1:exon
subclass of: SO_0000010

109923360
type: Gene
SIO_000068: ncbigene

position:2643330:-1
position: 2643330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2725626:-1
position: 2725626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2643330-2725626:-1:exon

LOC109923360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923360
product: netrin-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048610557.1
SIO_010081: LOC109923360
subclass of: SO_0000673
so part of: LOC109923360
location: complement(join(2643330..2643334,2683710..2683843,2684876..2685089,2687673..2687861,2690262..2690388,2702034..2702309,2719049..2719575,2725360..2725626))
location: region:2643330-2725626:-1
so has part: feature:2725360-2725626:-1:exon
so has part: feature:2719049-2719575:-1:exon
so has part: feature:2702034-2702309:-1:exon
so has part: feature:2690262-2690388:-1:exon
so has part: feature:2687673-2687861:-1:exon
so has part: feature:2684876-2685089:-1:exon
so has part: feature:2683710-2683843:-1:exon
so has part: feature:2643330-2643334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2725360-2725626:-1:exon

position:2725360:-1
position: 2725360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2719049-2719575:-1:exon

position:2719049:-1
position: 2719049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719575:-1
position: 2719575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2702034-2702309:-1:exon

position:2702034:-1
position: 2702034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702309:-1
position: 2702309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2690262-2690388:-1:exon

position:2690262:-1
position: 2690262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690388:-1
position: 2690388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2687673-2687861:-1:exon

position:2687673:-1
position: 2687673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2687861:-1
position: 2687861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2684876-2685089:-1:exon

position:2684876:-1
position: 2684876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2685089:-1
position: 2685089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2683710-2683843:-1:exon

position:2683710:-1
position: 2683710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2683843:-1
position: 2683843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2643330-2643334:-1:exon

LOC109923360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: netrin-4-like
translation: MSLWLAAGVLLALGWRPQAAGLADVPGVRRHCESGACNPHLGNLAAARQLRTSTTCGLNGTQFFCSHLGRGCTEAPMCGKCGGFHGRHSHPAMAMTDSSFHLPQTWWQSSPGSYRETIQLDLDTSFYFTHLIMIFKSPRPAAMVLERSQDFGSTWKPYKYFATSCSEMFGLPDDLNHIGAICTSRYSNPFPCSRGEVIFRVLSPPHSVEDPYSVQAQELLKVTNIRVRLLKRQSCPCLSPAANLKPQWFAHYAIYDFIAMGSCFCNGHAEECGPTEGFRPVRGNFQTVVHGKCICQHNTVGEHCERCRPLYNDRLWKPADGKKGTANPCQKCTCNDHANSCHFDLKVWLASGNHSGGVCDNCRHNTEGQHCQLCQTGFYRNIRVPLSAPDTCLACSCHPVGSAMLPSQPRAPCDPVTGDCLCKPGVAGPHCDRCMLGYWGLGEYGCRPCDCPESCDPYTGDCTSSTVNVNWYQQPADAAPNQGLLSSLTGRDLTWDWEDEQGFSALRHSG
SIO_010081: LOC109923360
subclass of: SO_0000673
so part of: LOC109923360
location: complement(join(2643330..2643334,2683710..2683843,2684876..2685089,2687673..2687861,2690262..2690388,2702034..2702309,2719049..2719575,2725360..2725420))
location: region:2643330-2725420:-1
so has part: feature:2725360-2725420:-1:exon
so has part: feature:2719049-2719575:-1:exon
so has part: feature:2702034-2702309:-1:exon
so has part: feature:2690262-2690388:-1:exon
so has part: feature:2687673-2687861:-1:exon
so has part: feature:2684876-2685089:-1:exon
so has part: feature:2683710-2683843:-1:exon
so has part: feature:2643330-2643334:-1:exon

XP_048466514.1
type: Protein
SIO_000068: ncbiprotein

position:2725420:-1
position: 2725420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2725360-2725420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2719049-2719575:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2702034-2702309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690262-2690388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2687673-2687861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2684876-2685089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2683710-2683843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2643330-2643334:-1:exon

snrpf
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: snrpf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2810518..2828594
location: region:2810518-2828594:1
so has part: feature:2810518-2828594:1:exon
subclass of: SO_0000010

109918889
type: Gene
SIO_000068: ncbigene

position:2810518:1
position: 2810518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2828594:1
position: 2828594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810518-2828594:1:exon

snrpf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: snrpf
product: small nuclear ribonucleoprotein polypeptide F
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020518838.2
SIO_010081: snrpf
subclass of: SO_0000673
so part of: snrpf
location: join(2810518..2810695,2811111..2811236,2813016..2813080,2828295..2828594)
location: region:2810518-2828594:1
so has part: feature:2810518-2810695:1:exon
so has part: feature:2811111-2811236:1:exon
so has part: feature:2813016-2813080:1:exon
so has part: feature:2828295-2828594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2810518-2810695:1:exon

position:2810695:1
position: 2810695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2811111-2811236:1:exon

position:2811111:1
position: 2811111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2811236:1
position: 2811236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2813016-2813080:1:exon

position:2813016:1
position: 2813016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2813080:1
position: 2813080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2828295-2828594:1:exon

position:2828295:1
position: 2828295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

snrpf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: snrpf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small nuclear ribonucleoprotein F
translation: MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALAGHLGEVLIRCNNVLYIRGVEEEEEDGEMRE
SIO_010081: snrpf
subclass of: SO_0000673
so part of: snrpf
location: join(2810693..2810695,2811111..2811236,2813016..2813080,2828295..2828361)
location: region:2810693-2828361:1
so has part: feature:2810693-2810695:1:exon
so has part: feature:2811111-2811236:1:exon
so has part: feature:2813016-2813080:1:exon
so has part: feature:2828295-2828361:1:exon

XP_020374427.1
type: Protein
SIO_000068: ncbiprotein

position:2810693:1
position: 2810693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2828361:1
position: 2828361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810693-2810695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2811111-2811236:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2813016-2813080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2828295-2828361:1:exon

LOC109922964
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109922964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2845039..2859776)
location: region:2845039-2859776:-1
so has part: feature:2845039-2859776:-1:exon
subclass of: SO_0000010

109922964
type: Gene
SIO_000068: ncbigene

position:2845039:-1
position: 2845039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2859776:-1
position: 2859776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2845039-2859776:-1:exon

LOC109922964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109922964
product: ubiquitin carboxyl-terminal hydrolase 44-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610558.1
SIO_010081: LOC109922964
subclass of: SO_0000673
so part of: LOC109922964
location: complement(join(2845039..2850418,2852444..2852649,2852809..2852917,2858451..2858649,2859696..2859776))
location: region:2845039-2859776:-1
so has part: feature:2859696-2859776:-1:exon
so has part: feature:2858451-2858649:-1:exon
so has part: feature:2852809-2852917:-1:exon
so has part: feature:2852444-2852649:-1:exon
so has part: feature:2845039-2850418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2859696-2859776:-1:exon

position:2859696:-1
position: 2859696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2858451-2858649:-1:exon

position:2858451:-1
position: 2858451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2858649:-1
position: 2858649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2852809-2852917:-1:exon

position:2852809:-1
position: 2852809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2852917:-1
position: 2852917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2852444-2852649:-1:exon

position:2852444:-1
position: 2852444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2852649:-1
position: 2852649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2845039-2850418:-1:exon

position:2850418:-1
position: 2850418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109922964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109922964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 44-like
translation: MSTLVHILEDAVGEFGELTPGGGKQMEVTCLACDNKSNTIESFWDLSLEFPERYHCNGKEAASQYPCSLTEMLAKFTETEALEGKIYACNQCNRNRRKSSSKPLVLTEAQKQLMVHKLPQVMRLHLKRFRWSGRNHREKIGVHVSFDQILNMEPYCCRELAGDFGSNSFIYDLAAVVMHHGKGFGSGHYTAYCYNTDGGLWVHCNDSTVTICTVDEVCKAQAYILFYTHRLPHNIKVPSPPASPGNDSPPASS
SIO_010081: LOC109922964
subclass of: SO_0000673
so part of: LOC109922964
location: complement(join(2850252..2850418,2852444..2852649,2852809..2852917,2858451..2858649,2859696..2859776))
location: region:2850252-2859776:-1
so has part: feature:2859696-2859776:-1:exon
so has part: feature:2858451-2858649:-1:exon
so has part: feature:2852809-2852917:-1:exon
so has part: feature:2852444-2852649:-1:exon
so has part: feature:2850252-2850418:-1:exon

XP_048466515.1
type: Protein
SIO_000068: ncbiprotein

position:2850252:-1
position: 2850252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2859696-2859776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2858451-2858649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2852809-2852917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2852444-2852649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2850252-2850418:-1:exon

metap2a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: metap2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2870729..2888474)
location: region:2870729-2888474:-1
so has part: feature:2870729-2888474:-1:exon
subclass of: SO_0000010

109922966
type: Gene
SIO_000068: ncbigene

position:2870729:-1
position: 2870729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2888474:-1
position: 2888474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2870729-2888474:-1:exon

metap2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: metap2a
product: methionyl aminopeptidase 2a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610501.1
SIO_010081: metap2a
subclass of: SO_0000673
so part of: metap2a
location: complement(join(2870729..2871532,2872767..2872882,2873768..2873871,2874899..2874995,2875358..2875452,2875545..2875726,2877199..2877360,2879768..2879870,2882323..2882388,2882484..2882591,2888286..2888474))
location: region:2870729-2888474:-1
so has part: feature:2888286-2888474:-1:exon
so has part: feature:2882484-2882591:-1:exon
so has part: feature:2882323-2882388:-1:exon
so has part: feature:2879768-2879870:-1:exon
so has part: feature:2877199-2877360:-1:exon
so has part: feature:2875545-2875726:-1:exon
so has part: feature:2875358-2875452:-1:exon
so has part: feature:2874899-2874995:-1:exon
so has part: feature:2873768-2873871:-1:exon
so has part: feature:2872767-2872882:-1:exon
so has part: feature:2870729-2871532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2888286-2888474:-1:exon

position:2888286:-1
position: 2888286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2882484-2882591:-1:exon

position:2882484:-1
position: 2882484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2882591:-1
position: 2882591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2882323-2882388:-1:exon

position:2882323:-1
position: 2882323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2882388:-1
position: 2882388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2879768-2879870:-1:exon

position:2879768:-1
position: 2879768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2879870:-1
position: 2879870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2877199-2877360:-1:exon

position:2877199:-1
position: 2877199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2877360:-1
position: 2877360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2875545-2875726:-1:exon

position:2875545:-1
position: 2875545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875726:-1
position: 2875726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2875358-2875452:-1:exon

position:2875358:-1
position: 2875358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875452:-1
position: 2875452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2874899-2874995:-1:exon

position:2874899:-1
position: 2874899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2874995:-1
position: 2874995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2873768-2873871:-1:exon

position:2873768:-1
position: 2873768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873871:-1
position: 2873871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2872767-2872882:-1:exon

position:2872767:-1
position: 2872767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2872882:-1
position: 2872882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2870729-2871532:-1:exon

position:2871532:-1
position: 2871532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

metap2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: metap2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine aminopeptidase 2
translation: MAEQAVLLEAGGGGEGAVDSPHLLNGVPHDEVTEESTKKKKKKKRKGKSGVQNECEKESAGTDDVTKQLEKQVLEDKEKEEDGEEEGDGEGENSAGKKKKKKKKKKGPKVQTDPPSIPICELFPSGAFLKGQECEYPPLQDGRTSAWRMTSEEKKVLNQASEEIWSDFRQAAEAHRQVRKYVRSWLKPGMTMIEICEKLEDCSRKLIKENGLSAGLAFPTGCSLNNCAAHYTPNAGDPTVLQYDDVCKIDFGTHVNGHIIDCAFTVAFNPKYDKLIEAVRDATNTGIKNAGIDVRLCDIGESIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMDCSHYMKNFDVGHVPIRLPRAKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY
SIO_010081: metap2a
subclass of: SO_0000673
so part of: metap2a
location: complement(join(2871280..2871532,2872767..2872882,2873768..2873871,2874899..2874995,2875358..2875452,2875545..2875726,2877199..2877360,2879768..2879870,2882323..2882388,2882484..2882591,2888286..2888433))
location: region:2871280-2888433:-1
so has part: feature:2888286-2888433:-1:exon
so has part: feature:2882484-2882591:-1:exon
so has part: feature:2882323-2882388:-1:exon
so has part: feature:2879768-2879870:-1:exon
so has part: feature:2877199-2877360:-1:exon
so has part: feature:2875545-2875726:-1:exon
so has part: feature:2875358-2875452:-1:exon
so has part: feature:2874899-2874995:-1:exon
so has part: feature:2873768-2873871:-1:exon
so has part: feature:2872767-2872882:-1:exon
so has part: feature:2871280-2871532:-1:exon

XP_048466458.1
type: Protein
SIO_000068: ncbiprotein

position:2871280:-1
position: 2871280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2888433:-1
position: 2888433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2888286-2888433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882484-2882591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2882323-2882388:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2879768-2879870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2877199-2877360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2875545-2875726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2875358-2875452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2874899-2874995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2873768-2873871:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2872767-2872882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871280-2871532:-1:exon

LOC109937756
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109937756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2894053..2952045
location: region:2894053-2952045:1
so has part: feature:2894053-2952045:1:exon
subclass of: SO_0000010

109937756
type: Gene
SIO_000068: ncbigene

position:2894053:1
position: 2894053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952045:1
position: 2952045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2894053-2952045:1:exon

LOC109937756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937756
product: uncharacterized LOC109937756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048610504.1
SIO_010081: LOC109937756
subclass of: SO_0000673
so part of: LOC109937756
location: join(2894053..2894145,2904090..2904159,2904241..2904344,2905225..2905748,2943084..2943131,2943297..2943396,2951755..2952045)
location: region:2894053-2952045:1
so has part: feature:2894053-2894145:1:exon
so has part: feature:2904090-2904159:1:exon
so has part: feature:2904241-2904344:1:exon
so has part: feature:2905225-2905748:1:exon
so has part: feature:2943084-2943131:1:exon
so has part: feature:2943297-2943396:1:exon
so has part: feature:2951755-2952045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2894053-2894145:1:exon

position:2894145:1
position: 2894145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2904090-2904159:1:exon

position:2904090:1
position: 2904090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904159:1
position: 2904159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2904241-2904344:1:exon

position:2904241:1
position: 2904241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904344:1
position: 2904344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2905225-2905748:1:exon

position:2905225:1
position: 2905225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2905748:1
position: 2905748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2943084-2943131:1:exon

position:2943084:1
position: 2943084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2943131:1
position: 2943131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2943297-2943396:1:exon

position:2943297:1
position: 2943297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2943396:1
position: 2943396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2951755-2952045:1:exon

position:2951755:1
position: 2951755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109937756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109937756
translation: MSLKTSHLFFFDQASYRNFKKPRKQPGKKDFEALTPPKGQQTVNLARSPQKTKKRLPASAVLTEQKAVDVAQARNRPGSGASVLNVFISSLADEVEHVQYFENLQAATPFLLTEIDGMILHCKIAGIPFPRGLENILNYSWNDLINDVSYKRKQWPTAACKRTCVPKKPPQKLSRAHGSVTSASTITNSSRTRTRSAPISEELKEKPNIKVNQRHVSRSTVKGFTINFSVSSKACLDQGWIIKPYDETIAKLNWREIYTLMLEKLQVENTKINFEKSVMMKYGFDKPVILLHYEEAKIEPRFRKYMAMPEMPLVKDGIPLIPNLKVENPALSKLHYALNDGSAII
SIO_010081: LOC109937756
subclass of: SO_0000673
so part of: LOC109937756
location: join(2904121..2904159,2904241..2904344,2905225..2905748,2943084..2943131,2943297..2943396,2951755..2951977)
location: region:2904121-2951977:1
so has part: feature:2904121-2904159:1:exon
so has part: feature:2904241-2904344:1:exon
so has part: feature:2905225-2905748:1:exon
so has part: feature:2943084-2943131:1:exon
so has part: feature:2943297-2943396:1:exon
so has part: feature:2951755-2951977:1:exon

XP_048466461.1
type: Protein
SIO_000068: ncbiprotein

position:2904121:1
position: 2904121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951977:1
position: 2951977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2904121-2904159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2904241-2904344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2905225-2905748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2943084-2943131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2943297-2943396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2951755-2951977:1:exon

LOC109927265
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109927265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2951831..3027444
location: region:2951831-3027444:1
so has part: feature:2951831-3027444:1:exon
subclass of: SO_0000010

109927265
type: Gene
SIO_000068: ncbigene

position:2951831:1
position: 2951831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3027444:1
position: 3027444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2951831-3027444:1:exon

LOC109927265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927265
product: uncharacterized protein C3orf20-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048610502.1
SIO_010081: LOC109927265
subclass of: SO_0000673
so part of: LOC109927265
location: join(2951831..2951933,2959212..2959332,2960577..2960708,2970320..2970464,2973459..2973654,2983264..2983356,2991898..2992204,2996908..2997024,3018543..3018685,3024891..3025022,3026532..3027444)
location: region:2951831-3027444:1
so has part: feature:2951831-2951933:1:exon
so has part: feature:2959212-2959332:1:exon
so has part: feature:2960577-2960708:1:exon
so has part: feature:2970320-2970464:1:exon
so has part: feature:2973459-2973654:1:exon
so has part: feature:2983264-2983356:1:exon
so has part: feature:2991898-2992204:1:exon
so has part: feature:2996908-2997024:1:exon
so has part: feature:3018543-3018685:1:exon
so has part: feature:3024891-3025022:1:exon
so has part: feature:3026532-3027444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2951831-2951933:1:exon

position:2951933:1
position: 2951933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2959212-2959332:1:exon

position:2959212:1
position: 2959212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959332:1
position: 2959332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2960577-2960708:1:exon

position:2960577:1
position: 2960577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2960708:1
position: 2960708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2970320-2970464:1:exon

position:2970320:1
position: 2970320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2970464:1
position: 2970464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2973459-2973654:1:exon

position:2973459:1
position: 2973459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2973654:1
position: 2973654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2983264-2983356:1:exon

position:2983264:1
position: 2983264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2983356:1
position: 2983356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2991898-2992204:1:exon

position:2991898:1
position: 2991898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2992204:1
position: 2992204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2996908-2997024:1:exon

position:2996908:1
position: 2996908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2997024:1
position: 2997024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3018543-3018685:1:exon

position:3018543:1
position: 3018543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3018685:1
position: 3018685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3024891-3025022:1:exon

position:3024891:1
position: 3024891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3025022:1
position: 3025022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3026532-3027444:1:exon

position:3026532:1
position: 3026532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109927265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927265
product: uncharacterized protein C3orf20-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048610503.1
SIO_010081: LOC109927265
subclass of: SO_0000673
so part of: LOC109927265
location: join(2959146..2959332,2960577..2960708,2970320..2970464,2973459..2973654,2983264..2983356,2991898..2992204,2996908..2997024,3018543..3018685,3024891..3025022,3026532..3027444)
location: region:2959146-3027444:1
so has part: feature:2959146-2959332:1:exon
so has part: feature:2960577-2960708:1:exon
so has part: feature:2970320-2970464:1:exon
so has part: feature:2973459-2973654:1:exon
so has part: feature:2983264-2983356:1:exon
so has part: feature:2991898-2992204:1:exon
so has part: feature:2996908-2997024:1:exon
so has part: feature:3018543-3018685:1:exon
so has part: feature:3024891-3025022:1:exon
so has part: feature:3026532-3027444:1:exon

position:2959146:1
position: 2959146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2959146-2959332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2960577-2960708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2970320-2970464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2973459-2973654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2983264-2983356:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2991898-2992204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2996908-2997024:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3018543-3018685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3024891-3025022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3026532-3027444:1:exon

LOC109927265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf20-like
translation: MIDEDKMTLKSWQWPRRGKLPEPVWIKVNDCITIRIIGQFSIHFTFKWQYETIRFSLSPLPDVIPPRPDELFLRTRSSVQRTISTPRAVPEITIHYLRQLHRKIKNIVNDWMEYYRAETGLSKLPVVRRTESDRHIFKVQSKKQPFKPYMPPVKGFSPQADYVRFLSAPGQEQNRCLPRSCSFSRNLAAMISREGNIGLMTSNRHGSSTPANIQQGLRFPQVPKEEKEWLLSPSPCPVVLRAAMMGTVKKRCHCSTTKVPNITDLEFDTFIKKSTAGSEQLIIVCVVSLQQLKSAPYEQMIQYLYEENNRNRNQPCVECQKDSFRLIKYNISTAHEYTGQSPALLVKRHNITPGMFLMYIGGKLLFADHIFNGYSNSVKDLMKQITKTYDDYANGRHLLYDFRFSSVGPALPSTTQDDTSLQRQSDQSARPKSETSIKPAICIFQSANRAVTIQDFIAFSLTQRNICCDAERIPAETMESMLESCFRRPN
SIO_010081: LOC109927265
subclass of: SO_0000673
so part of: LOC109927265
location: join(2959252..2959332,2960577..2960708,2970320..2970464,2973459..2973654,2983264..2983356,2991898..2992204,2996908..2997024,3018543..3018685,3024891..3025022,3026532..3026658)
location: region:2959252-3026658:1
so has part: feature:2959252-2959332:1:exon
so has part: feature:2960577-2960708:1:exon
so has part: feature:2970320-2970464:1:exon
so has part: feature:2973459-2973654:1:exon
so has part: feature:2983264-2983356:1:exon
so has part: feature:2991898-2992204:1:exon
so has part: feature:2996908-2997024:1:exon
so has part: feature:3018543-3018685:1:exon
so has part: feature:3024891-3025022:1:exon
so has part: feature:3026532-3026658:1:exon

XP_048466459.1
type: Protein
SIO_000068: ncbiprotein

position:2959252:1
position: 2959252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3026658:1
position: 3026658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2959252-2959332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2960577-2960708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2970320-2970464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2973459-2973654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2983264-2983356:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2991898-2992204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2996908-2997024:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3018543-3018685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3024891-3025022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3026532-3026658:1:exon

LOC109927265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf20-like
translation: MIDEDKMTLKSWQWPRRGKLPEPVWIKVNDCITIRIIGQFSIHFTFKWQYETIRFSLSPLPDVIPPRPDELFLRTRSSVQRTISTPRAVPEITIHYLRQLHRKIKNIVNDWMEYYRAETGLSKLPVVRRTESDRHIFKVQSKKQPFKPYMPPVKGFSPQADYVRFLSAPGQEQNRCLPRSCSFSRNLAAMISREGNIGLMTSNRHGSSTPANIQQGLRFPQVPKEEKEWLLSPSPCPVVLRAAMMGTVKKRCHCSTTKVPNITDLEFDTFIKKSTAGSEQLIIVCVVSLQQLKSAPYEQMIQYLYEENNRNRNQPCVECQKDSFRLIKYNISTAHEYTGQSPALLVKRHNITPGMFLMYIGGKLLFADHIFNGYSNSVKDLMKQITKTYDDYANGRHLLYDFRFSSVGPALPSTTQDDTSLQRQSDQSARPKSETSIKPAICIFQSANRAVTIQDFIAFSLTQRNICCDAERIPAETMESMLESCFRRPN
SIO_010081: LOC109927265
subclass of: SO_0000673
so part of: LOC109927265
location: join(2959252..2959332,2960577..2960708,2970320..2970464,2973459..2973654,2983264..2983356,2991898..2992204,2996908..2997024,3018543..3018685,3024891..3025022,3026532..3026658)
location: region:2959252-3026658:1
so has part: feature:2959252-2959332:1:exon
so has part: feature:2960577-2960708:1:exon
so has part: feature:2970320-2970464:1:exon
so has part: feature:2973459-2973654:1:exon
so has part: feature:2983264-2983356:1:exon
so has part: feature:2991898-2992204:1:exon
so has part: feature:2996908-2997024:1:exon
so has part: feature:3018543-3018685:1:exon
so has part: feature:3024891-3025022:1:exon
so has part: feature:3026532-3026658:1:exon

XP_048466460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2959252-2959332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2960577-2960708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2970320-2970464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2973459-2973654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2983264-2983356:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2991898-2992204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2996908-2997024:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3018543-3018685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3024891-3025022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3026532-3026658:1:exon

vezt
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: vezt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3046073..3116535)
location: region:3046073-3116535:-1
so has part: feature:3046073-3116535:-1:exon
subclass of: SO_0000010

109927314
type: Gene
SIO_000068: ncbigene

position:3046073:-1
position: 3046073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116535:-1
position: 3116535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3046073-3116535:-1:exon

vezt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: vezt
product: vezatin, adherens junctions transmembrane protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020527301.2
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3046073..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078394,3095033..3095164,3116413..3116535))
location: region:3046073-3116535:-1
so has part: feature:3116413-3116535:-1:exon
so has part: feature:3095033-3095164:-1:exon
so has part: feature:3078311-3078394:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3046073-3050443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3116413-3116535:-1:exon

position:3116413:-1
position: 3116413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3095033-3095164:-1:exon

position:3095033:-1
position: 3095033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095164:-1
position: 3095164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3078311-3078394:-1:exon

position:3078311:-1
position: 3078311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3078394:-1
position: 3078394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3074396-3074571:-1:exon

position:3074396:-1
position: 3074396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3074571:-1
position: 3074571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3069185-3069469:-1:exon

position:3069185:-1
position: 3069185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3069469:-1
position: 3069469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3068091-3068237:-1:exon

position:3068091:-1
position: 3068091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3068237:-1
position: 3068237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3065731-3065878:-1:exon

position:3065731:-1
position: 3065731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3065878:-1
position: 3065878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3063456-3063787:-1:exon

position:3063456:-1
position: 3063456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3063787:-1
position: 3063787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3062874-3063067:-1:exon

position:3062874:-1
position: 3062874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3063067:-1
position: 3063067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3054942-3055042:-1:exon

position:3054942:-1
position: 3054942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3055042:-1
position: 3055042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3052082-3052289:-1:exon

position:3052082:-1
position: 3052082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3052289:-1
position: 3052289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3046073-3050443:-1:exon

position:3050443:-1
position: 3050443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

vezt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: vezt
product: vezatin, adherens junctions transmembrane protein, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610203.1
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3046073..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078394,3095033..3095164,3114777..3114878))
location: region:3046073-3114878:-1
so has part: feature:3114777-3114878:-1:exon
so has part: feature:3095033-3095164:-1:exon
so has part: feature:3078311-3078394:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3046073-3050443:-1:exon

position:3114878:-1
position: 3114878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114777-3114878:-1:exon

position:3114777:-1
position: 3114777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3095033-3095164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3078311-3078394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3074396-3074571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3069185-3069469:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3068091-3068237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3065731-3065878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3063456-3063787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3062874-3063067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3054942-3055042:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3052082-3052289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3046073-3050443:-1:exon

vezt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: vezt
product: vezatin, adherens junctions transmembrane protein, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610204.1
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3046073..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078394,3082411..3082493,3095033..3095164,3114777..3114878))
location: region:3046073-3114878:-1
so has part: feature:3114777-3114878:-1:exon
so has part: feature:3095033-3095164:-1:exon
so has part: feature:3082411-3082493:-1:exon
so has part: feature:3078311-3078394:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3046073-3050443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3114777-3114878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3095033-3095164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3082411-3082493:-1:exon

position:3082411:-1
position: 3082411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3082493:-1
position: 3082493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3078311-3078394:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3074396-3074571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3069185-3069469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3068091-3068237:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3065731-3065878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3063456-3063787:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3062874-3063067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3054942-3055042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3052082-3052289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3046073-3050443:-1:exon

vezt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: vezt
product: vezatin, adherens junctions transmembrane protein, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610202.1
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3046073..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078394,3095033..3095164,3114740..3114818))
location: region:3046073-3114818:-1
so has part: feature:3114740-3114818:-1:exon
so has part: feature:3095033-3095164:-1:exon
so has part: feature:3078311-3078394:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3046073-3050443:-1:exon

position:3114818:-1
position: 3114818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114740-3114818:-1:exon

position:3114740:-1
position: 3114740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3095033-3095164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3078311-3078394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3074396-3074571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3069185-3069469:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3068091-3068237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3065731-3065878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3063456-3063787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3062874-3063067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3054942-3055042:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3052082-3052289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3046073-3050443:-1:exon

vezt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: vezt
product: vezatin, adherens junctions transmembrane protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610201.1
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3046073..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078394,3095033..3095164,3109134..3109752))
location: region:3046073-3109752:-1
so has part: feature:3109134-3109752:-1:exon
so has part: feature:3095033-3095164:-1:exon
so has part: feature:3078311-3078394:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3046073-3050443:-1:exon

position:3109752:-1
position: 3109752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3109134-3109752:-1:exon

position:3109134:-1
position: 3109134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3095033-3095164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3078311-3078394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3074396-3074571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3069185-3069469:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3068091-3068237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3065731-3065878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3063456-3063787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3062874-3063067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3054942-3055042:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3052082-3052289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3046073-3050443:-1:exon

vezt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: vezt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vezatin isoform X2
translation: MAAVEEFDEELVLENSPLYQYLQDVGHTDFEICPTSSWAEEHSSKEEPNELDISAPPTENLLLKCINVLQKWNPFTGMKRIDLESLDMGFRLRSLSTILKQEVLLQEDVELVDLLDPSILQSTQAQQPKNGYLPSKWLWRCPNIWDVSVLAILASALVMTSDRCDTFPWGFVGMGLCGLGLCMVFRSFSLWRTAKLQRSMRKCNKSLEDIVMNSHTFTSLVRKSIRQIQETEVISRGFTLVTAACPASKLGNSWQQQGQQLTGLRKAVYRSVRSAYRASRVATCQMLKSYPLNSEIDNVTNYLSAIPYNELGMGLDKELISDDEAQELTDCYSLKALKVLFQLWVGQSSEFFRRLAFLLSPVQAAPKSHVTAEHLAHHVVAEVTQNISHILTNCLEELKRSYDFHRYWQVQHQSNLKASNKTKQQSRELKNLYAVVRSLQLHLKALLNEVISLEDYLEKLHESQEQHKLTQEVYHDLHQKLKSIQPHMGASINCWDETSNQVDKLVHKSLDRKGRPMVQDKNLPPIWKQSAKSVVQIEDQDPVPDEQELEAYVEESDLDGDFGGGLLNYLSQEEREKERREREESRRMLQELKSVLGFKASELERQKWKQLLFNDHAALKTISSADLTQLEGVPLECQEADANVQGHKVCDDCSQGVDANQLDSLTDSKECWRSTGPDCTDVHLASRKGADLSDILQTGTVNGCLACCSETTDSSIQKQENSQPAASEQLQTTVQQGLAERHGPVALHFTSALAAQVAAQSHSFAHLSEQTFGDEEEEDEDTSTDVECVNSGP
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3049911..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078394,3095033..3095164,3116413..3116454))
location: region:3049911-3116454:-1
so has part: feature:3116413-3116454:-1:exon
so has part: feature:3095033-3095164:-1:exon
so has part: feature:3078311-3078394:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3049911-3050443:-1:exon

XP_020382890.1
type: Protein
SIO_000068: ncbiprotein

position:3049911:-1
position: 3049911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116454:-1
position: 3116454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3116413-3116454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3095033-3095164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3078311-3078394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3074396-3074571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3069185-3069469:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3068091-3068237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3065731-3065878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3063456-3063787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3062874-3063067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3054942-3055042:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3052082-3052289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3049911-3050443:-1:exon

vezt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: vezt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vezatin isoform X3
translation: MGKGFRRCAENSPLYQYLQDVGHTDFEICPTSSWAEEHSSKEEPNELDISAPPTENLLLKCINVLQKWNPFTGMKRIDLESLDMGFRLRSLSTILKQEVLLQEDVELVDLLDPSILQSTQAQQPKNGYLPSKWLWRCPNIWDVSVLAILASALVMTSDRCDTFPWGFVGMGLCGLGLCMVFRSFSLWRTAKLQRSMRKCNKSLEDIVMNSHTFTSLVRKSIRQIQETEVISRGFTLVTAACPASKLGNSWQQQGQQLTGLRKAVYRSVRSAYRASRVATCQMLKSYPLNSEIDNVTNYLSAIPYNELGMGLDKELISDDEAQELTDCYSLKALKVLFQLWVGQSSEFFRRLAFLLSPVQAAPKSHVTAEHLAHHVVAEVTQNISHILTNCLEELKRSYDFHRYWQVQHQSNLKASNKTKQQSRELKNLYAVVRSLQLHLKALLNEVISLEDYLEKLHESQEQHKLTQEVYHDLHQKLKSIQPHMGASINCWDETSNQVDKLVHKSLDRKGRPMVQDKNLPPIWKQSAKSVVQIEDQDPVPDEQELEAYVEESDLDGDFGGGLLNYLSQEEREKERREREESRRMLQELKSVLGFKASELERQKWKQLLFNDHAALKTISSADLTQLEGVPLECQEADANVQGHKVCDDCSQGVDANQLDSLTDSKECWRSTGPDCTDVHLASRKGADLSDILQTGTVNGCLACCSETTDSSIQKQENSQPAASEQLQTTVQQGLAERHGPVALHFTSALAAQVAAQSHSFAHLSEQTFGDEEEEDEDTSTDVECVNSGP
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3049911..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078394,3095033..3095164,3114740..3114769))
location: region:3049911-3114769:-1
so has part: feature:3114740-3114769:-1:exon
so has part: feature:3095033-3095164:-1:exon
so has part: feature:3078311-3078394:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3049911-3050443:-1:exon

XP_048466159.1
type: Protein
SIO_000068: ncbiprotein

position:3114769:-1
position: 3114769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114740-3114769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3095033-3095164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3078311-3078394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3074396-3074571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3069185-3069469:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3068091-3068237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3065731-3065878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3063456-3063787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3062874-3063067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3054942-3055042:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3052082-3052289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3049911-3050443:-1:exon

vezt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: vezt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vezatin isoform X1
translation: MDRTNIVNKISYKDHDKDYIGQTGRKLALRIHEQQIVTKGHNQYSLFSIHTDKENHRFDWDTVRFLGQANKRKAREFLEAWSSTKKAISKHVELDSIYTPLQRKIGNENSPLYQYLQDVGHTDFEICPTSSWAEEHSSKEEPNELDISAPPTENLLLKCINVLQKWNPFTGMKRIDLESLDMGFRLRSLSTILKQEVLLQEDVELVDLLDPSILQSTQAQQPKNGYLPSKWLWRCPNIWDVSVLAILASALVMTSDRCDTFPWGFVGMGLCGLGLCMVFRSFSLWRTAKLQRSMRKCNKSLEDIVMNSHTFTSLVRKSIRQIQETEVISRGFTLVTAACPASKLGNSWQQQGQQLTGLRKAVYRSVRSAYRASRVATCQMLKSYPLNSEIDNVTNYLSAIPYNELGMGLDKELISDDEAQELTDCYSLKALKVLFQLWVGQSSEFFRRLAFLLSPVQAAPKSHVTAEHLAHHVVAEVTQNISHILTNCLEELKRSYDFHRYWQVQHQSNLKASNKTKQQSRELKNLYAVVRSLQLHLKALLNEVISLEDYLEKLHESQEQHKLTQEVYHDLHQKLKSIQPHMGASINCWDETSNQVDKLVHKSLDRKGRPMVQDKNLPPIWKQSAKSVVQIEDQDPVPDEQELEAYVEESDLDGDFGGGLLNYLSQEEREKERREREESRRMLQELKSVLGFKASELERQKWKQLLFNDHAALKTISSADLTQLEGVPLECQEADANVQGHKVCDDCSQGVDANQLDSLTDSKECWRSTGPDCTDVHLASRKGADLSDILQTGTVNGCLACCSETTDSSIQKQENSQPAASEQLQTTVQQGLAERHGPVALHFTSALAAQVAAQSHSFAHLSEQTFGDEEEEDEDTSTDVECVNSGP
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3049911..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078394,3095033..3095164,3109134..3109457))
location: region:3049911-3109457:-1
so has part: feature:3109134-3109457:-1:exon
so has part: feature:3095033-3095164:-1:exon
so has part: feature:3078311-3078394:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3049911-3050443:-1:exon

XP_048466158.1
type: Protein
SIO_000068: ncbiprotein

position:3109457:-1
position: 3109457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3109134-3109457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3095033-3095164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3078311-3078394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3074396-3074571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3069185-3069469:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3068091-3068237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3065731-3065878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3063456-3063787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3062874-3063067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3054942-3055042:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3052082-3052289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3049911-3050443:-1:exon

vezt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: vezt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vezatin isoform X4
translation: MKRIDLESLDMGFRLRSLSTILKQEVLLQEDVELVDLLDPSILQSTQAQQPKNGYLPSKWLWRCPNIWDVSVLAILASALVMTSDRCDTFPWGFVGMGLCGLGLCMVFRSFSLWRTAKLQRSMRKCNKSLEDIVMNSHTFTSLVRKSIRQIQETEVISRGFTLVTAACPASKLGNSWQQQGQQLTGLRKAVYRSVRSAYRASRVATCQMLKSYPLNSEIDNVTNYLSAIPYNELGMGLDKELISDDEAQELTDCYSLKALKVLFQLWVGQSSEFFRRLAFLLSPVQAAPKSHVTAEHLAHHVVAEVTQNISHILTNCLEELKRSYDFHRYWQVQHQSNLKASNKTKQQSRELKNLYAVVRSLQLHLKALLNEVISLEDYLEKLHESQEQHKLTQEVYHDLHQKLKSIQPHMGASINCWDETSNQVDKLVHKSLDRKGRPMVQDKNLPPIWKQSAKSVVQIEDQDPVPDEQELEAYVEESDLDGDFGGGLLNYLSQEEREKERREREESRRMLQELKSVLGFKASELERQKWKQLLFNDHAALKTISSADLTQLEGVPLECQEADANVQGHKVCDDCSQGVDANQLDSLTDSKECWRSTGPDCTDVHLASRKGADLSDILQTGTVNGCLACCSETTDSSIQKQENSQPAASEQLQTTVQQGLAERHGPVALHFTSALAAQVAAQSHSFAHLSEQTFGDEEEEDEDTSTDVECVNSGP
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3049911..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078337))
location: region:3049911-3078337:-1
so has part: feature:3078311-3078337:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3049911-3050443:-1:exon

XP_048466160.1
type: Protein
SIO_000068: ncbiprotein

position:3078337:-1
position: 3078337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3078311-3078337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3074396-3074571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3069185-3069469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3068091-3068237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3065731-3065878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3063456-3063787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3062874-3063067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3054942-3055042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3052082-3052289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3049911-3050443:-1:exon

vezt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: vezt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vezatin isoform X4
translation: MKRIDLESLDMGFRLRSLSTILKQEVLLQEDVELVDLLDPSILQSTQAQQPKNGYLPSKWLWRCPNIWDVSVLAILASALVMTSDRCDTFPWGFVGMGLCGLGLCMVFRSFSLWRTAKLQRSMRKCNKSLEDIVMNSHTFTSLVRKSIRQIQETEVISRGFTLVTAACPASKLGNSWQQQGQQLTGLRKAVYRSVRSAYRASRVATCQMLKSYPLNSEIDNVTNYLSAIPYNELGMGLDKELISDDEAQELTDCYSLKALKVLFQLWVGQSSEFFRRLAFLLSPVQAAPKSHVTAEHLAHHVVAEVTQNISHILTNCLEELKRSYDFHRYWQVQHQSNLKASNKTKQQSRELKNLYAVVRSLQLHLKALLNEVISLEDYLEKLHESQEQHKLTQEVYHDLHQKLKSIQPHMGASINCWDETSNQVDKLVHKSLDRKGRPMVQDKNLPPIWKQSAKSVVQIEDQDPVPDEQELEAYVEESDLDGDFGGGLLNYLSQEEREKERREREESRRMLQELKSVLGFKASELERQKWKQLLFNDHAALKTISSADLTQLEGVPLECQEADANVQGHKVCDDCSQGVDANQLDSLTDSKECWRSTGPDCTDVHLASRKGADLSDILQTGTVNGCLACCSETTDSSIQKQENSQPAASEQLQTTVQQGLAERHGPVALHFTSALAAQVAAQSHSFAHLSEQTFGDEEEEDEDTSTDVECVNSGP
SIO_010081: vezt
subclass of: SO_0000673
so part of: vezt
location: complement(join(3049911..3050443,3052082..3052289,3054942..3055042,3062874..3063067,3063456..3063787,3065731..3065878,3068091..3068237,3069185..3069469,3074396..3074571,3078311..3078337))
location: region:3049911-3078337:-1
so has part: feature:3078311-3078337:-1:exon
so has part: feature:3074396-3074571:-1:exon
so has part: feature:3069185-3069469:-1:exon
so has part: feature:3068091-3068237:-1:exon
so has part: feature:3065731-3065878:-1:exon
so has part: feature:3063456-3063787:-1:exon
so has part: feature:3062874-3063067:-1:exon
so has part: feature:3054942-3055042:-1:exon
so has part: feature:3052082-3052289:-1:exon
so has part: feature:3049911-3050443:-1:exon

XP_048466161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3078311-3078337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3074396-3074571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3069185-3069469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3068091-3068237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3065731-3065878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3063456-3063787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3062874-3063067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3054942-3055042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3052082-3052289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3049911-3050443:-1:exon

fgd6
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: fgd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3116723..3213223
location: region:3116723-3213223:1
so has part: feature:3116723-3213223:1:exon
subclass of: SO_0000010

109927298
type: Gene
SIO_000068: ncbigene

position:3116723:1
position: 3116723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213223:1
position: 3213223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3116723-3213223:1:exon

fgd6
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: fgd6
product: FYVE, RhoGEF and PH domain containing 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007264463.1
SIO_010081: fgd6
so part of: fgd6
location: join(3116723..3116952,3122787..3125199,3148459..3148594,3160371..3160435,3160537..3160567,3163822..3163973,3164985..3165141,3165332..3165419,3171070..3171124,3176272..3176306)
location: region:3116723-3176306:1
so has part: feature:3116723-3116952:1:exon
so has part: feature:3122787-3125199:1:exon
so has part: feature:3148459-3148594:1:exon
so has part: feature:3160371-3160435:1:exon
so has part: feature:3160537-3160567:1:exon
so has part: feature:3163822-3163973:1:exon
so has part: feature:3164985-3165141:1:exon
so has part: feature:3165332-3165419:1:exon
so has part: feature:3171070-3171124:1:exon
so has part: feature:3176272-3176306:1:exon

position:3176306:1
position: 3176306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3116723-3116952:1:exon

position:3116952:1
position: 3116952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3122787-3125199:1:exon

position:3122787:1
position: 3122787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3125199:1
position: 3125199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3148459-3148594:1:exon

position:3148459:1
position: 3148459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148594:1
position: 3148594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3160371-3160435:1:exon

position:3160371:1
position: 3160371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3160435:1
position: 3160435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3160537-3160567:1:exon

position:3160537:1
position: 3160537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3160567:1
position: 3160567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3163822-3163973:1:exon

position:3163822:1
position: 3163822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3163973:1
position: 3163973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3164985-3165141:1:exon

position:3164985:1
position: 3164985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3165141:1
position: 3165141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3165332-3165419:1:exon

position:3165332:1
position: 3165332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3165419:1
position: 3165419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3171070-3171124:1:exon

position:3171070:1
position: 3171070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3171124:1
position: 3171124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3176272-3176306:1:exon

position:3176272:1
position: 3176272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fgd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: fgd6
product: FYVE, RhoGEF and PH domain containing 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048610199.1
SIO_010081: fgd6
subclass of: SO_0000673
so part of: fgd6
location: join(3116725..3116952,3122787..3125199,3148459..3148594,3160371..3160435,3160537..3160567,3163822..3163973,3164985..3165141,3165332..3165419,3176272..3176322,3176414..3176472,3176586..3176657,3186025..3186093,3187990..3188073,3188444..3188523,3199105..3199204,3212912..3213058,3213141..3213223)
location: region:3116725-3213223:1
so has part: feature:3116725-3116952:1:exon
so has part: feature:3122787-3125199:1:exon
so has part: feature:3148459-3148594:1:exon
so has part: feature:3160371-3160435:1:exon
so has part: feature:3160537-3160567:1:exon
so has part: feature:3163822-3163973:1:exon
so has part: feature:3164985-3165141:1:exon
so has part: feature:3165332-3165419:1:exon
so has part: feature:3176272-3176322:1:exon
so has part: feature:3176414-3176472:1:exon
so has part: feature:3176586-3176657:1:exon
so has part: feature:3186025-3186093:1:exon
so has part: feature:3187990-3188073:1:exon
so has part: feature:3188444-3188523:1:exon
so has part: feature:3199105-3199204:1:exon
so has part: feature:3212912-3213058:1:exon
so has part: feature:3213141-3213223:1:exon

position:3116725:1
position: 3116725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3116725-3116952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3122787-3125199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3148459-3148594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3160371-3160435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3160537-3160567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3163822-3163973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3164985-3165141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3165332-3165419:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3176272-3176322:1:exon

position:3176322:1
position: 3176322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3176414-3176472:1:exon

position:3176414:1
position: 3176414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3176472:1
position: 3176472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3176586-3176657:1:exon

position:3176586:1
position: 3176586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3176657:1
position: 3176657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3186025-3186093:1:exon

position:3186025:1
position: 3186025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3186093:1
position: 3186093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3187990-3188073:1:exon

position:3187990:1
position: 3187990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3188073:1
position: 3188073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3188444-3188523:1:exon

position:3188444:1
position: 3188444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3188523:1
position: 3188523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3199105-3199204:1:exon

position:3199105:1
position: 3199105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3199204:1
position: 3199204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3212912-3213058:1:exon

position:3212912:1
position: 3212912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213058:1
position: 3213058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3213141-3213223:1:exon

position:3213141:1
position: 3213141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fgd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: fgd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 6
translation: MSAGIKKPPVAPKPRIALGKKPPPPPVAPKPDIIISEPFSTHKGPKPALAPKPVLPKITPVAEVKPTPLQINKCPDEIKRELSENVKCPTCQGDGMQKGDCELTHHCEISNYSCKTEYEHKYINGENTGKTQLVIDHLSKLEALEKSKKYDQANYSSTVWQRPETQNSKTVNKYQISSKTSFPEQKFKDVLTQVVSPNNYLPKQKDAHCDAGIKLHRSNNGQSEVFNTDQTFQNLRNSKRNTREPFVDGNKDYEIKNAAQESEKGVKNGKNCHSSGTDLKESVHNSQPKVPFTVAEKEKLTFQDNSSITASTFTSVPCTKPIPMPKPNKARLVGLIRQNCIDNSVEDAMCPNEICNDLCFKTADGTAVDLKKSVVSLDAGSVSMCKSESSYQTVKMNSASSQDKIAELSQAKDSCNQSILPFKKPVLDSVSKVKISSDLQNRSKVEQIKKDLESGNRTLPTDSKSSFIRSSSLSMSLPKYLSLSYAPKVPASNNDTGSDFDRVLSNDAKSTKSDISPKIIPEKPQRHSLPSSVIVKRDLTAGNDKSASGSVENDAEEGTGSLSGRETKTSTSEHKTIHLSEKPVWKLPHPILPFLGSPGTVTLTSTSTNNEANISKPRAKSLSSADSEKLEKSLKAPSKKNSFKRILGIKLSAKMKTDFQKFLTKGSYSLDSAPDGLLSMESKDNNLCISGSVTGDQEIKPVKAHSVDSCYHTKKGQILKSPSDFPNNFPAEQESHVQLHKEGPKNSKLHLTEQQSLTPKYENISGNFDWKSSSSVEDCDSSFYEIQPYAVSTCYQKYTATQKNQHISPVQNQDNHSLEMDINSDEEVIFSSDEEDASSDTSKGELDQQDEKQNGEGMKTKVYHIAREIMSSEKVFVDVLKLLHIDFRDSVIQSSRQYGKQVIEDKILNQILYYLPQLYELNRGLLRELEERMAHWEEHQRIADIFMEKGPYLKMYSTYIKEFDKNVCLLDEQCKKNPTFANVVREFEMSTRCANLALKHYLLKPVQRIPQYKLLLTDYMKNLSIDCADYKDTQAALAIVVEVANHANDIMKQGDNFQKLMQIQYSLNSQQEIVQPGRVFLKEGTLMKLSRKVMQPRMFFLLNDVLLYTTPVQSGTFKMNNMLSLAGMKVSKPSQEAYQNELNIESVERSFILSASSAAERDEWLEAISKAIEDYTKKRTTFTGSKSLEEEPDKPELNTPLGTKAPIWIPDPRATMCMICTCDFTLTWRRHHCRACGKVPAVAIPEAILIIFKFFSER
SIO_010081: fgd6
subclass of: SO_0000673
so part of: fgd6
location: join(3116943..3116952,3122787..3125199,3148459..3148594,3160371..3160435,3160537..3160567,3163822..3163973,3164985..3165141,3165332..3165419,3176272..3176322,3176414..3176472,3176586..3176657,3186025..3186093,3187990..3188073,3188444..3188523,3199105..3199204,3212912..3213058,3213141..3213203)
location: region:3116943-3213203:1
so has part: feature:3116943-3116952:1:exon
so has part: feature:3122787-3125199:1:exon
so has part: feature:3148459-3148594:1:exon
so has part: feature:3160371-3160435:1:exon
so has part: feature:3160537-3160567:1:exon
so has part: feature:3163822-3163973:1:exon
so has part: feature:3164985-3165141:1:exon
so has part: feature:3165332-3165419:1:exon
so has part: feature:3176272-3176322:1:exon
so has part: feature:3176414-3176472:1:exon
so has part: feature:3176586-3176657:1:exon
so has part: feature:3186025-3186093:1:exon
so has part: feature:3187990-3188073:1:exon
so has part: feature:3188444-3188523:1:exon
so has part: feature:3199105-3199204:1:exon
so has part: feature:3212912-3213058:1:exon
so has part: feature:3213141-3213203:1:exon

XP_048466156.1
type: Protein
SIO_000068: ncbiprotein

position:3116943:1
position: 3116943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213203:1
position: 3213203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3116943-3116952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3122787-3125199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3148459-3148594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3160371-3160435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3160537-3160567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3163822-3163973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3164985-3165141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3165332-3165419:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3176272-3176322:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3176414-3176472:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3176586-3176657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3186025-3186093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3187990-3188073:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3188444-3188523:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3199105-3199204:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3212912-3213058:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3213141-3213203:1:exon

fgd5b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: fgd5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3220810..3240979)
location: region:3220810-3240979:-1
so has part: feature:3220810-3240979:-1:exon
subclass of: SO_0000010

125485801
type: Gene
SIO_000068: ncbigene

position:3220810:-1
position: 3220810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3240979:-1
position: 3240979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3220810-3240979:-1:exon

fgd5b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: fgd5b
product: FYVE, RhoGEF and PH domain containing 5b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_048610536.1
SIO_010081: fgd5b
subclass of: SO_0000673
so part of: fgd5b
location: complement(join(3220810..3223100,3229353..3229504,3230964..3231092,3235500..3235630,3240878..3240979))
location: region:3220810-3240979:-1
so has part: feature:3240878-3240979:-1:exon
so has part: feature:3235500-3235630:-1:exon
so has part: feature:3230964-3231092:-1:exon
so has part: feature:3229353-3229504:-1:exon
so has part: feature:3220810-3223100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3240878-3240979:-1:exon

position:3240878:-1
position: 3240878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3235500-3235630:-1:exon

position:3235500:-1
position: 3235500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3235630:-1
position: 3235630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3230964-3231092:-1:exon

position:3230964:-1
position: 3230964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3231092:-1
position: 3231092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3229353-3229504:-1:exon

position:3229353:-1
position: 3229353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3229504:-1
position: 3229504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3220810-3223100:-1:exon

position:3223100:-1
position: 3223100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fgd5b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: fgd5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 5b
translation: MLSPTHKSSSALTSVFHSIQHSSGRKHKKIPAALKEVSANTGASSMSGYLYRSKGIKKPWKRLWFVIQDKVLYTYAASEDVAALESQPLLGFTVSELQDDLSEPKVIFQLLHKRTLFYVFKADDRHTAQRWVEVFQEATVL
SIO_010081: fgd5b
subclass of: SO_0000673
so part of: fgd5b
location: complement(join(3223064..3223100,3229353..3229504,3230964..3231092,3235500..3235607))
location: region:3223064-3235607:-1
so has part: feature:3235500-3235607:-1:exon
so has part: feature:3230964-3231092:-1:exon
so has part: feature:3229353-3229504:-1:exon
so has part: feature:3223064-3223100:-1:exon

XP_048466493.1
type: Protein
SIO_000068: ncbiprotein

position:3223064:-1
position: 3223064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3235607:-1
position: 3235607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3235500-3235607:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3230964-3231092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3229353-3229504:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3223064-3223100:-1:exon

LOC109927292
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3269134..3323576
location: region:3269134-3323576:1
so has part: feature:3269134-3323576:1:exon
subclass of: SO_0000010

109927292
type: Gene
SIO_000068: ncbigene

position:3269134:1
position: 3269134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3323576:1
position: 3323576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3269134-3323576:1:exon

LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610031.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269134..3269230,3291052..3291154,3292379..3292495,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3323576)
location: region:3269134-3323576:1
so has part: feature:3269134-3269230:1:exon
so has part: feature:3291052-3291154:1:exon
so has part: feature:3292379-3292495:1:exon
so has part: feature:3296056-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3323576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3269134-3269230:1:exon

position:3269230:1
position: 3269230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3291052-3291154:1:exon

position:3291052:1
position: 3291052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3291154:1
position: 3291154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3292379-3292495:1:exon

position:3292379:1
position: 3292379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3292495:1
position: 3292495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3296056-3296190:1:exon

position:3296056:1
position: 3296056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3296190:1
position: 3296190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3296525-3296752:1:exon

position:3296525:1
position: 3296525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3296752:1
position: 3296752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3297278-3297362:1:exon

position:3297278:1
position: 3297278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3297362:1
position: 3297362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3300108-3300287:1:exon

position:3300108:1
position: 3300108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300287:1
position: 3300287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3300382-3300529:1:exon

position:3300382:1
position: 3300382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300529:1
position: 3300529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3301969-3302062:1:exon

position:3301969:1
position: 3301969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302062:1
position: 3302062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3302159-3302343:1:exon

position:3302159:1
position: 3302159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302343:1
position: 3302343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3303075-3303258:1:exon

position:3303075:1
position: 3303075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303258:1
position: 3303258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3307984-3308105:1:exon

position:3307984:1
position: 3307984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3308105:1
position: 3308105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3308476-3308615:1:exon

position:3308476:1
position: 3308476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3308615:1
position: 3308615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3312185-3312322:1:exon

position:3312185:1
position: 3312185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3312322:1
position: 3312322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3316358-3316463:1:exon

position:3316358:1
position: 3316358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3316463:1
position: 3316463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3320758-3323576:1:exon

position:3320758:1
position: 3320758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610036.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269134..3269230,3291052..3291154,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3323576)
location: region:3269134-3323576:1
so has part: feature:3269134-3269230:1:exon
so has part: feature:3291052-3291154:1:exon
so has part: feature:3296056-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3323576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3269134-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3291052-3291154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296056-3296190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3320758-3323576:1:exon

LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610040.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
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LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610032.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
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LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610033.1
SIO_010081: LOC109927292
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position:3303084:1
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urn:…
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LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610037.1
SIO_010081: LOC109927292
subclass of: SO_0000673
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urn:…
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LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610027.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
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position:3269151:1
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reference: sequence
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urn:…
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urn:…
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LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610029.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
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urn:…
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position:3312200:1
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urn:…
SIO_000300: 14
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urn:…
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LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610028.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610030.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269151..3269230,3292379..3292495,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303084..3303258,3307984..3308105,3308476..3308615,3312200..3312322,3316358..3316463,3320758..3323576)
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 4
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3303084-3303258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312200-3312322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3320758-3323576:1:exon

LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610034.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269151..3269230,3292379..3292495,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3323576)
location: region:3269151-3323576:1
so has part: feature:3269151-3269230:1:exon
so has part: feature:3292379-3292495:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3323576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3269151-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3292379-3292495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3320758-3323576:1:exon

LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610038.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269151..3269230,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303084..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3323576)
location: region:3269151-3323576:1
so has part: feature:3269151-3269230:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303084-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3323576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3269151-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3303084-3303258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3320758-3323576:1:exon

LOC109927292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109927292
product: nuclear receptor subfamily 2, group C, member 1, transcript variant X12
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610039.1
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269151..3269230,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303084..3303258,3307984..3308105,3308476..3308615,3312200..3312322,3316358..3316463,3320758..3323576)
location: region:3269151-3323576:1
so has part: feature:3269151-3269230:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303084-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312200-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3323576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3269151-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3303084-3303258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3312200-3312322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3320758-3323576:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X1
translation: MANSMEELAQQIAEHQMAEVHMHQVSMAGSPPVSLTEQAQVKLITITDDLVQQLAEQQVSHSQGTLSTVAPGTVIGRPIMTSTPQRIQIVPADPGVTVAQRIQIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRYFRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3292379..3292495,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3292379-3292495:1:exon
so has part: feature:3296056-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465984.1
type: Protein
SIO_000068: ncbiprotein

position:3269174:1
position: 3269174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3320932:1
position: 3320932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3292379-3292495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296056-3296190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X3
translation: MANSMEELAQQIAEHQMAEVHMHQVSMAGSPPVSLTEQAQVKLITITDDLVQQLAEQQVSHSQGTLSTVAPGTVIGRPIMTSTPQRIQIVPADPGVTVAQRIQIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRYFRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3292379..3292495,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312200..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3292379-3292495:1:exon
so has part: feature:3296056-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312200-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3292379-3292495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296056-3296190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312200-3312322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X2
translation: MANSMEELAQQIAEHQMAEVHMHQVSMAGSPPVSLTEQAQVKLITITDDLVQQLAEQQVSHSQGTLSTVAPGTVIGRPIMTSTPQRIQIVPADPGVTVAQRIQIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3292379..3292495,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303084..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3292379-3292495:1:exon
so has part: feature:3296056-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303084-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3292379-3292495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296056-3296190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3303084-3303258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X4
translation: MANSMEELAQQIAEHQMAEVHMHQVSMAGSPPVSLTEQAQVKLITITDDLVQQLAEQQVSHSQGTLSTVAPGTVIGRPIMTSTPQRIQIVPADPGVTVAQRIQIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3292379..3292495,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303084..3303258,3307984..3308105,3308476..3308615,3312200..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3292379-3292495:1:exon
so has part: feature:3296056-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303084-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312200-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3292379-3292495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296056-3296190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3303084-3303258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312200-3312322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X8
translation: MANSMEELAQQIAEHQMAEVHMHQVSMAGSPPVSLTEQAQVKLITITDDLVQQLAEQQIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRYFRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3292379..3292495,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3292379-3292495:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3292379-3292495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X6
translation: MANSMEELAQQIAEHQMAEVSHSQGTLSTVAPGTVIGRPIMTSTPQRIQIVPADPGVTVAQRIQIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRYFRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3296056-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296056-3296190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X7
translation: MANSMEELAQQIAEHQMAEVSHSQGTLSTVAPGTVIGRPIMTSTPQRIQIVPADPGVTVAQRIQIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303084..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3296056-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303084-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296056-3296190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3303084-3303258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X10
translation: MANSMEELAQQIAEHQMAEIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRYFRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X11
translation: MANSMEELAQQIAEHQMAEIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303084..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303084-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3303084-3303258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X12
translation: MANSMEELAQQIAEHQMAEIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3269174..3269230,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303084..3303258,3307984..3308105,3308476..3308615,3312200..3312322,3316358..3316463,3320758..3320932)
location: region:3269174-3320932:1
so has part: feature:3269174-3269230:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303084-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312200-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3269174-3269230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3303084-3303258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3312200-3312322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X5
translation: MHQVSMAGSPPVSLTEQAQVKLITITDDLVQQLAEQQVSHSQGTLSTVAPGTVIGRPIMTSTPQRIQIVPADPGVTVAQRIQIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRYFRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3292385..3292495,3296056..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3292385-3320932:1
so has part: feature:3292385-3292495:1:exon
so has part: feature:3296056-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465988.1
type: Protein
SIO_000068: ncbiprotein

position:3292385:1
position: 3292385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3292385-3292495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296056-3296190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X9
translation: MTSTPQRIQIVPADPGVTVAQRIQIVTDQQTGQKIQIVTSMDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRYFRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3296119..3296190,3296525..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3296119-3320932:1
so has part: feature:3296119-3296190:1:exon
so has part: feature:3296525-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465993.1
type: Protein
SIO_000068: ncbiprotein

position:3296119:1
position: 3296119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3296119-3296190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296525-3296752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3320758-3320932:1:exon

LOC109927292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109927292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group C member 1-A isoform X13
translation: MDHGASKQFILTNSDGTPSNKVILARPDSGQGKVILATPDSAGLNQLIFTSPDGSAQHIQIVTDTASGEQSAVKPPLEFCVVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYVCRGSKDCVINKHHRNRCQYCRLQRCLALGMKQDSVQCERKPIEVSREKSANCAASTEKIYIRKDLRSPLAATPTFVTDKESARSAGLLEPGMLVNIQQPLLKTESAMLLAAESKAETCQGDLSTLANVVTSLANLSKSKDLSQSSADLSGIDALSNGDTSLSEMQQDDQSASDITRYFRAFDTLAKALNPAEGQAVQNSAECMDTSGANIQLISGEQSLPVVEIEGPLLSDVHVAFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGPDNNTALVRACWNELFTLGLAQCSQVMNLSTILTAIVNHLQTSLQQDKLSADRVKVVMEHIWKLQEFCNSMVKLSLDGYEYAYLKAIVLFSPDHPGLINAAQIDKFQEKAYMELQDYEAKAYPDDSYRLSRLLLRLPALRLMSSAITEELFFAGLIGNVQIDSIIPYILRMETAEYNSQITGSAV
SIO_010081: LOC109927292
subclass of: SO_0000673
so part of: LOC109927292
location: join(3296573..3296752,3297278..3297362,3300108..3300287,3300382..3300529,3301969..3302062,3302159..3302343,3303075..3303258,3307984..3308105,3308476..3308615,3312185..3312322,3316358..3316463,3320758..3320932)
location: region:3296573-3320932:1
so has part: feature:3296573-3296752:1:exon
so has part: feature:3297278-3297362:1:exon
so has part: feature:3300108-3300287:1:exon
so has part: feature:3300382-3300529:1:exon
so has part: feature:3301969-3302062:1:exon
so has part: feature:3302159-3302343:1:exon
so has part: feature:3303075-3303258:1:exon
so has part: feature:3307984-3308105:1:exon
so has part: feature:3308476-3308615:1:exon
so has part: feature:3312185-3312322:1:exon
so has part: feature:3316358-3316463:1:exon
so has part: feature:3320758-3320932:1:exon

XP_048465997.1
type: Protein
SIO_000068: ncbiprotein

position:3296573:1
position: 3296573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3296573-3296752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3297278-3297362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3300108-3300287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300382-3300529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3301969-3302062:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3302159-3302343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3303075-3303258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3307984-3308105:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3308476-3308615:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3312185-3312322:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3316358-3316463:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3320758-3320932:1:exon

ndufa12
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ndufa12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3331974..3340547
location: region:3331974-3340547:1
so has part: feature:3331974-3340547:1:exon
subclass of: SO_0000010

109927275
type: Gene
SIO_000068: ncbigene

position:3331974:1
position: 3331974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3340547:1
position: 3340547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3331974-3340547:1:exon

ndufa12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ndufa12
product: NADH:ubiquinone oxidoreductase subunit A12
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020527251.2
SIO_010081: ndufa12
subclass of: SO_0000673
so part of: ndufa12
location: join(3331974..3332166,3334159..3334241,3335763..3335850,3340265..3340547)
location: region:3331974-3340547:1
so has part: feature:3331974-3332166:1:exon
so has part: feature:3334159-3334241:1:exon
so has part: feature:3335763-3335850:1:exon
so has part: feature:3340265-3340547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3331974-3332166:1:exon

position:3332166:1
position: 3332166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3334159-3334241:1:exon

position:3334159:1
position: 3334159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3334241:1
position: 3334241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3335763-3335850:1:exon

position:3335763:1
position: 3335763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3335850:1
position: 3335850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3340265-3340547:1:exon

position:3340265:1
position: 3340265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ndufa12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ndufa12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
translation: MADILPVLKRGWAQFWSHGGVMGAFWKILRTSELKTGKFIGEDKYGNKYFEDKRYFFGRHRWVEYTSEMNGKNTYWEIDGSMIPPEWHRWLHCSTEDPPTTHPPAARKFIWKTHQFNMSGTPGQYVPFSTTHKKIHEWVPPQASEK
SIO_010081: ndufa12
subclass of: SO_0000673
so part of: ndufa12
location: join(3332078..3332166,3334159..3334241,3335763..3335850,3340265..3340445)
location: region:3332078-3340445:1
so has part: feature:3332078-3332166:1:exon
so has part: feature:3334159-3334241:1:exon
so has part: feature:3335763-3335850:1:exon
so has part: feature:3340265-3340445:1:exon

XP_020382840.1
type: Protein
SIO_000068: ncbiprotein

position:3332078:1
position: 3332078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3340445:1
position: 3340445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3332078-3332166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3334159-3334241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3335763-3335850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3340265-3340445:1:exon

tmcc3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: tmcc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3512484..3531334
location: region:3512484-3531334:1
so has part: feature:3512484-3531334:1:exon
subclass of: SO_0000010

109915695
type: Gene
SIO_000068: ncbigene

position:3512484:1
position: 3512484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3531334:1
position: 3531334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3512484-3531334:1:exon

tmcc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tmcc3
product: transmembrane and coiled-coil domain family 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020515362.2
SIO_010081: tmcc3
subclass of: SO_0000673
so part of: tmcc3
location: join(3512484..3512571,3519807..3520720,3523902..3524037,3529528..3531334)
location: region:3512484-3531334:1
so has part: feature:3512484-3512571:1:exon
so has part: feature:3519807-3520720:1:exon
so has part: feature:3523902-3524037:1:exon
so has part: feature:3529528-3531334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3512484-3512571:1:exon

position:3512571:1
position: 3512571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3519807-3520720:1:exon

position:3519807:1
position: 3519807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3520720:1
position: 3520720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3523902-3524037:1:exon

position:3523902:1
position: 3523902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3524037:1
position: 3524037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3529528-3531334:1:exon

position:3529528:1
position: 3529528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmcc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tmcc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domain protein 3
translation: MSRLSLLGNMRRGGSDTNLNLTVTDGLLDFQRDRQTVEQLKQKILKLTEQLRIEQEVRDENVAEYLKLVNNADKQQARRIKQVFEKKNQKSAQAIAGLQKKFDHYHRKLRDVEQNGSRNSKEQLPDLQNNMREVGNARQGAAGGPGMESRKSLPGVTLTPPSSVFNKPREIAILIRNKFGSADNIAHMKSSMDDFQQDSGPRTFSRSAMLMSKPKYLSDDECSSGSDFADSNGNSDFGVTTSPKSNSLERETDKLAAILDELREMKETQSQLSQDIEKLKIQFSSDFSLMTQTLQEEHYRSARLEDQLNDLTELHQHETIDLKQELASIEEKVAYQSYERARDMQEALESCQTRLATLELHQQQQQVVQIENANAKVLLGKCINIFLAIMTVILVCISTIAKFSIPLMRSRLHVACTISAVIVAFIVWKKWDQFQSLTDHIL
SIO_010081: tmcc3
subclass of: SO_0000673
so part of: tmcc3
location: join(3519822..3520720,3523902..3524037,3529528..3529821)
location: region:3519822-3529821:1
so has part: feature:3519822-3520720:1:exon
so has part: feature:3523902-3524037:1:exon
so has part: feature:3529528-3529821:1:exon

XP_020370951.1
type: Protein
SIO_000068: ncbiprotein

position:3519822:1
position: 3519822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3529821:1
position: 3529821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3519822-3520720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3523902-3524037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3529528-3529821:1:exon

cep83
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cep83
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3540550..3591030
location: region:3540550-3591030:1
so has part: feature:3540550-3591030:1:exon
subclass of: SO_0000010

109915682
type: Gene
SIO_000068: ncbigene

position:3540550:1
position: 3540550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3591030:1
position: 3591030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3540550-3591030:1:exon

cep83
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cep83
product: centrosomal protein 83
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048610559.1
SIO_010081: cep83
subclass of: SO_0000673
so part of: cep83
location: join(3540550..3540676,3543828..3544112,3545592..3545742,3557288..3557380,3557485..3557616,3571486..3571536,3574982..3575096,3576434..3576578,3577998..3578147,3579369..3579444,3580783..3580940,3583745..3583874,3583968..3584068,3585025..3585211,3588544..3591030)
location: region:3540550-3591030:1
so has part: feature:3540550-3540676:1:exon
so has part: feature:3543828-3544112:1:exon
so has part: feature:3545592-3545742:1:exon
so has part: feature:3557288-3557380:1:exon
so has part: feature:3557485-3557616:1:exon
so has part: feature:3571486-3571536:1:exon
so has part: feature:3574982-3575096:1:exon
so has part: feature:3576434-3576578:1:exon
so has part: feature:3577998-3578147:1:exon
so has part: feature:3579369-3579444:1:exon
so has part: feature:3580783-3580940:1:exon
so has part: feature:3583745-3583874:1:exon
so has part: feature:3583968-3584068:1:exon
so has part: feature:3585025-3585211:1:exon
so has part: feature:3588544-3591030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3540550-3540676:1:exon

position:3540676:1
position: 3540676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3543828-3544112:1:exon

position:3543828:1
position: 3543828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3544112:1
position: 3544112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3545592-3545742:1:exon

position:3545592:1
position: 3545592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3545742:1
position: 3545742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3557288-3557380:1:exon

position:3557288:1
position: 3557288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3557380:1
position: 3557380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3557485-3557616:1:exon

position:3557485:1
position: 3557485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3557616:1
position: 3557616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3571486-3571536:1:exon

position:3571486:1
position: 3571486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3571536:1
position: 3571536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3574982-3575096:1:exon

position:3574982:1
position: 3574982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3575096:1
position: 3575096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3576434-3576578:1:exon

position:3576434:1
position: 3576434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3576578:1
position: 3576578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3577998-3578147:1:exon

position:3577998:1
position: 3577998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3578147:1
position: 3578147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3579369-3579444:1:exon

position:3579369:1
position: 3579369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3579444:1
position: 3579444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3580783-3580940:1:exon

position:3580783:1
position: 3580783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3580940:1
position: 3580940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3583745-3583874:1:exon

position:3583745:1
position: 3583745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3583874:1
position: 3583874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3583968-3584068:1:exon

position:3583968:1
position: 3583968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3584068:1
position: 3584068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3585025-3585211:1:exon

position:3585025:1
position: 3585025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3585211:1
position: 3585211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3588544-3591030:1:exon

position:3588544:1
position: 3588544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cep83
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cep83
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 83 kDa
translation: MASGRVESCALGERSLEGSPLYPGLSNPPARSQTSGHLHSAMEALPNQPSPLNVAAGLCGTDAELQKMLIDERMRCEHHKTNYQTLKAEHTRLQDEYTKAQHELKRLLVDKQNTHEKFQLLLAELRGELLDKTREHEELKMQVLTPQKLELLKAQIQQDLEAPMRERLRKQEEEAERYRAEYNKLRYEYTFLKSELEHQKEEYERLLEEKVIRFEAESSLRRTSSDIYLLLWQMLEECKHSHKLEITNIKLEAARAKGEVERERDNMQSEMNGLQSDIEILKANIVRHKELLTEKERELIRKVQAAKEDDFQKLTALQDERLELENKVADLERLKAEQEITWQADKEHMEEKLHALQLAEEASKREIQNLRSKLQQQVLQTEELEKEKNDNAELRQQNNEMQMQMNALSQSENDLLNNNSKMREMLERLKEEIRNARSQAERAQHEAEKLVEEKRVEWMEEKHKLQNRNTELEEKYCQAKDRLQRAALAQKKRKTLNESKQKRLQEKVQMLEAKKEELEIEKHAYKQNVPYESHARLQKRLKDLQRRHNEFRRLFLGPNFSSTGLCNSTNFLPSTFMQGTEATCMNVQEEQHQRELGLLRKRLEELETNQKQQLQELGALN
SIO_010081: cep83
subclass of: SO_0000673
so part of: cep83
location: join(3543838..3544112,3545592..3545742,3557288..3557380,3557485..3557616,3571486..3571536,3574982..3575096,3576434..3576578,3577998..3578147,3579369..3579444,3580783..3580940,3583745..3583874,3583968..3584068,3585025..3585211,3588544..3588645)
location: region:3543838-3588645:1
so has part: feature:3543838-3544112:1:exon
so has part: feature:3545592-3545742:1:exon
so has part: feature:3557288-3557380:1:exon
so has part: feature:3557485-3557616:1:exon
so has part: feature:3571486-3571536:1:exon
so has part: feature:3574982-3575096:1:exon
so has part: feature:3576434-3576578:1:exon
so has part: feature:3577998-3578147:1:exon
so has part: feature:3579369-3579444:1:exon
so has part: feature:3580783-3580940:1:exon
so has part: feature:3583745-3583874:1:exon
so has part: feature:3583968-3584068:1:exon
so has part: feature:3585025-3585211:1:exon
so has part: feature:3588544-3588645:1:exon

XP_048466516.1
type: Protein
SIO_000068: ncbiprotein

position:3543838:1
position: 3543838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3588645:1
position: 3588645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3543838-3544112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3545592-3545742:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3557288-3557380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3557485-3557616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3571486-3571536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3574982-3575096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3576434-3576578:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3577998-3578147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3579369-3579444:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3580783-3580940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3583745-3583874:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3583968-3584068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3585025-3585211:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3588544-3588645:1:exon

plxnc1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: plxnc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3607198..3722766)
location: region:3607198-3722766:-1
so has part: feature:3607198-3722766:-1:exon
subclass of: SO_0000010

109915712
type: Gene
SIO_000068: ncbigene

position:3607198:-1
position: 3607198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3722766:-1
position: 3722766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3607198-3722766:-1:exon

plxnc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: plxnc1
product: plexin C1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048610423.1
SIO_010081: plxnc1
subclass of: SO_0000673
so part of: plxnc1
location: complement(join(3607198..3609446,3611731..3611805,3611910..3612050,3615179..3615326,3618974..3619137,3624832..3624933,3625016..3625047,3625506..3625560,3628562..3628665,3629189..3629375,3636830..3636976,3638619..3638814,3640219..3640343,3642416..3642472,3642617..3642726,3644397..3644498,3651101..3651209,3654294..3654449,3654545..3654742,3656311..3656401,3661297..3661479,3662829..3662968,3664874..3664935,3666764..3666851,3667332..3667424,3673312..3673395,3673483..3673573,3677584..3677692,3678661..3678826,3681400..3681529,3684684..3684784,3697517..3697651,3699569..3699703,3721592..3722766))
location: region:3607198-3722766:-1
so has part: feature:3721592-3722766:-1:exon
so has part: feature:3699569-3699703:-1:exon
so has part: feature:3697517-3697651:-1:exon
so has part: feature:3684684-3684784:-1:exon
so has part: feature:3681400-3681529:-1:exon
so has part: feature:3678661-3678826:-1:exon
so has part: feature:3677584-3677692:-1:exon
so has part: feature:3673483-3673573:-1:exon
so has part: feature:3673312-3673395:-1:exon
so has part: feature:3667332-3667424:-1:exon
so has part: feature:3666764-3666851:-1:exon
so has part: feature:3664874-3664935:-1:exon
so has part: feature:3662829-3662968:-1:exon
so has part: feature:3661297-3661479:-1:exon
so has part: feature:3656311-3656401:-1:exon
so has part: feature:3654545-3654742:-1:exon
so has part: feature:3654294-3654449:-1:exon
so has part: feature:3651101-3651209:-1:exon
so has part: feature:3644397-3644498:-1:exon
so has part: feature:3642617-3642726:-1:exon
so has part: feature:3642416-3642472:-1:exon
so has part: feature:3640219-3640343:-1:exon
so has part: feature:3638619-3638814:-1:exon
so has part: feature:3636830-3636976:-1:exon
so has part: feature:3629189-3629375:-1:exon
so has part: feature:3628562-3628665:-1:exon
so has part: feature:3625506-3625560:-1:exon
so has part: feature:3625016-3625047:-1:exon
so has part: feature:3624832-3624933:-1:exon
so has part: feature:3618974-3619137:-1:exon
so has part: feature:3615179-3615326:-1:exon
so has part: feature:3611910-3612050:-1:exon
so has part: feature:3611731-3611805:-1:exon
so has part: feature:3607198-3609446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3721592-3722766:-1:exon

position:3721592:-1
position: 3721592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3699569-3699703:-1:exon

position:3699569:-1
position: 3699569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3699703:-1
position: 3699703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3697517-3697651:-1:exon

position:3697517:-1
position: 3697517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3697651:-1
position: 3697651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3684684-3684784:-1:exon

position:3684684:-1
position: 3684684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3684784:-1
position: 3684784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3681400-3681529:-1:exon

position:3681400:-1
position: 3681400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3681529:-1
position: 3681529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3678661-3678826:-1:exon

position:3678661:-1
position: 3678661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3678826:-1
position: 3678826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3677584-3677692:-1:exon

position:3677584:-1
position: 3677584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3677692:-1
position: 3677692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3673483-3673573:-1:exon

position:3673483:-1
position: 3673483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3673573:-1
position: 3673573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3673312-3673395:-1:exon

position:3673312:-1
position: 3673312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3673395:-1
position: 3673395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3667332-3667424:-1:exon

position:3667332:-1
position: 3667332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3667424:-1
position: 3667424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3666764-3666851:-1:exon

position:3666764:-1
position: 3666764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3666851:-1
position: 3666851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3664874-3664935:-1:exon

position:3664874:-1
position: 3664874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664935:-1
position: 3664935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3662829-3662968:-1:exon

position:3662829:-1
position: 3662829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3662968:-1
position: 3662968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3661297-3661479:-1:exon

position:3661297:-1
position: 3661297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661479:-1
position: 3661479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3656311-3656401:-1:exon

position:3656311:-1
position: 3656311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3656401:-1
position: 3656401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3654545-3654742:-1:exon

position:3654545:-1
position: 3654545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3654742:-1
position: 3654742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3654294-3654449:-1:exon

position:3654294:-1
position: 3654294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3654449:-1
position: 3654449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3651101-3651209:-1:exon

position:3651101:-1
position: 3651101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3651209:-1
position: 3651209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3644397-3644498:-1:exon

position:3644397:-1
position: 3644397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3644498:-1
position: 3644498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3642617-3642726:-1:exon

position:3642617:-1
position: 3642617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3642726:-1
position: 3642726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3642416-3642472:-1:exon

position:3642416:-1
position: 3642416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3642472:-1
position: 3642472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3640219-3640343:-1:exon