Rhincodon typus isolate 14 chromosome 21, sRhiTyp1.1, whole genome shotgun sequence.
type: Entry
definition: Rhincodon typus isolate 14 chromosome 21, sRhiTyp1.1, whole genome shotgun sequence.
sequence version: NC_063352.1
sequence date: 2022-06-09
sequence: sequence
division: CON
label: NC_063352.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA842712
dblink: SAMN19519256
keyword: WGS
keyword: RefSeq
source: Rhincodon typus (whale shark)
organism: Rhincodon typus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038818.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 50898788
topology: linear
so has quality: SO_0000987
location: 1..50898788
location: region:1-50898788:1
RO_0002162: 259920

NC_063352
type: RefSeq
SIO_000068: refseq

PRJNA842712
type: BioProject
SIO_000068: bioproject

SAMN19519256
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50898788:1
position: 50898788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-50898788:1:source
so part of: sequence
organism: Rhincodon typus
mol type: genomic DNA
isolate: 14
chromosome: 21
sex: male
tissue type: blood
dev stage: adult
collected by: 2018-05-24

259920
type: Taxonomy
SIO_000068: taxonomy

LOC109936472
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(46305..55261)
location: region:46305-55261:-1
so has part: feature:46305-55261:-1:exon
subclass of: SO_0000010

109936472
type: Gene
SIO_000068: ncbigene

position:46305:-1
position: 46305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55261:-1
position: 55261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46305-55261:-1:exon

LOC109936472
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936472
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609581.1
SIO_010081: LOC109936472
subclass of: SO_0000673
so part of: LOC109936472
location: complement(join(46305..46508,51780..51908,52093..52265,52428..52517,54331..55261))
location: region:46305-55261:-1
so has part: feature:54331-55261:-1:exon
so has part: feature:52428-52517:-1:exon
so has part: feature:52093-52265:-1:exon
so has part: feature:51780-51908:-1:exon
so has part: feature:46305-46508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54331-55261:-1:exon

position:54331:-1
position: 54331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52428-52517:-1:exon

position:52428:-1
position: 52428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52517:-1
position: 52517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:52093-52265:-1:exon

position:52093:-1
position: 52093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52265:-1
position: 52265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51780-51908:-1:exon

position:51780:-1
position: 51780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51908:-1
position: 51908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:46305-46508:-1:exon

position:46508:-1
position: 46508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109936472
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
translation: MLFPGSYHQISTACPLRCYKYVNMKEESTDMRAMTDSAAQTLFWTELFRGLAMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEIGANIQADYLYR
SIO_010081: LOC109936472
subclass of: SO_0000673
so part of: LOC109936472
location: complement(join(46377..46508,51780..51908,52093..52265,52428..52517,54331..54388))
location: region:46377-54388:-1
so has part: feature:54331-54388:-1:exon
so has part: feature:52428-52517:-1:exon
so has part: feature:52093-52265:-1:exon
so has part: feature:51780-51908:-1:exon
so has part: feature:46377-46508:-1:exon

XP_048465538.1
type: Protein
SIO_000068: ncbiprotein

position:46377:-1
position: 46377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54388:-1
position: 54388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54331-54388:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52428-52517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52093-52265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51780-51908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46377-46508:-1:exon

gpr139
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: gpr139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 261065..327312
location: region:261065-327312:1
so has part: feature:261065-327312:1:exon
subclass of: SO_0000010

109915126
type: Gene
SIO_000068: ncbigene

position:261065:1
position: 261065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327312:1
position: 327312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261065-327312:1:exon

gpr139
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gpr139
product: G protein-coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
transcript id: XM_048609853.1
SIO_010081: gpr139
subclass of: SO_0000673
so part of: gpr139
location: join(261065..261188,326378..327312)
location: region:261065-327312:1
so has part: feature:261065-261188:1:exon
so has part: feature:326378-327312:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261065-261188:1:exon

position:261188:1
position: 261188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326378-327312:1:exon

position:326378:1
position: 326378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gpr139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gpr139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MEHNHIFNTDSPLPSHDGEHACGLEYVRVAYYSLLLCLGLPANILTVIILSRLVARRQKSSYNYLLALAAADILVLFFIVFLDFLLEDFILGRQLPHVLDKIIGVLEFSSNHTSIWITVPLTIDRYIAVCHPLKYHTVSYPARTRKVILSVYIICFLTSVPYYWWPNIWSESYTSTSMHQILIWVHCFTVYLVPCSIFFVLNSIIIHKLKRKSHFRMRGYSTGKTTAILLTITTIFAILWAPRMVMILYYVYVSPINNGWLVHIASDIANMLALLNTAINFFLYCFISKRFRTMAAGTLKAFIKCQKQPVHFYTNHNFSITSSPWISPANSHCIKMLVYQYDKDGKPLKISP
SIO_010081: gpr139
subclass of: SO_0000673
so part of: gpr139
location: join(261065..261188,326378..327312)
location: region:261065-327312:1
so has part: feature:261065-261188:1:exon
so has part: feature:326378-327312:1:exon

XP_048465810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261065-261188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326378-327312:1:exon

iqck
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: iqck
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(467400..533294)
location: region:467400-533294:-1
so has part: feature:467400-533294:-1:exon
subclass of: SO_0000010

109937651
type: Gene
SIO_000068: ncbigene

position:467400:-1
position: 467400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533294:-1
position: 533294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467400-533294:-1:exon

iqck
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: iqck
product: IQ motif containing K
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048609615.1
SIO_010081: iqck
subclass of: SO_0000673
so part of: iqck
location: complement(join(467400..467656,482357..482471,496455..496539,500454..500531,500748..500800,513092..513189,530926..531070,533171..533294))
location: region:467400-533294:-1
so has part: feature:533171-533294:-1:exon
so has part: feature:530926-531070:-1:exon
so has part: feature:513092-513189:-1:exon
so has part: feature:500748-500800:-1:exon
so has part: feature:500454-500531:-1:exon
so has part: feature:496455-496539:-1:exon
so has part: feature:482357-482471:-1:exon
so has part: feature:467400-467656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533171-533294:-1:exon

position:533171:-1
position: 533171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:530926-531070:-1:exon

position:530926:-1
position: 530926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531070:-1
position: 531070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513092-513189:-1:exon

position:513092:-1
position: 513092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513189:-1
position: 513189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500748-500800:-1:exon

position:500748:-1
position: 500748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500800:-1
position: 500800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:500454-500531:-1:exon

position:500454:-1
position: 500454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500531:-1
position: 500531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:496455-496539:-1:exon

position:496455:-1
position: 496455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496539:-1
position: 496539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:482357-482471:-1:exon

position:482357:-1
position: 482357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482471:-1
position: 482471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:467400-467656:-1:exon

position:467656:-1
position: 467656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

iqck
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: iqck
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ domain-containing protein K
translation: MVAKVPVDTSVLENFNAEYSHPAFLGHAIVQKPPRPPTPPPTPPVPPPDQKNSTPRHYLEHYVFPVLLPGLYEALKEAKIQKCFERKRTKFNACDFLAEWLYNKNPRRVGKKFIAFSEIPFVTQWLQDHPRPPIPLSLLLSEDEAALIIQSFWRGYQVRCDPEIQELRQWQKELREENKGLKKKIIKFWADQESKVGQKMEDPEEVMPHLSEEVPIKVPSPTQYEIMLGIREACD
SIO_010081: iqck
subclass of: SO_0000673
so part of: iqck
location: complement(join(467535..467656,482357..482471,496455..496539,500454..500531,500748..500800,513092..513189,530926..531070,533171..533182))
location: region:467535-533182:-1
so has part: feature:533171-533182:-1:exon
so has part: feature:530926-531070:-1:exon
so has part: feature:513092-513189:-1:exon
so has part: feature:500748-500800:-1:exon
so has part: feature:500454-500531:-1:exon
so has part: feature:496455-496539:-1:exon
so has part: feature:482357-482471:-1:exon
so has part: feature:467535-467656:-1:exon

XP_048465572.1
type: Protein
SIO_000068: ncbiprotein

position:467535:-1
position: 467535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533182:-1
position: 533182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533171-533182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530926-531070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513092-513189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500748-500800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500454-500531:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:496455-496539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482357-482471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:467535-467656:-1:exon

vps35l
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: vps35l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 580558..655537
location: region:580558-655537:1
so has part: feature:580558-655537:1:exon
subclass of: SO_0000010

109921408
type: Gene
SIO_000068: ncbigene

position:580558:1
position: 580558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655537:1
position: 655537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580558-655537:1:exon

vps35l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: vps35l
product: VPS35 endosomal protein sorting factor like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609369.1
SIO_010081: vps35l
subclass of: SO_0000673
so part of: vps35l
location: join(580558..580819,580935..581012,583460..583582,593133..593179,593303..593414,594113..594229,596368..596421,596505..596585,603098..603160,605835..605920,608555..608635,610329..610392,612339..612437,614307..614384,614671..614785,630556..630695,633266..633431,634990..635108,650357..650503,653963..655537)
location: region:580558-655537:1
so has part: feature:580558-580819:1:exon
so has part: feature:580935-581012:1:exon
so has part: feature:583460-583582:1:exon
so has part: feature:593133-593179:1:exon
so has part: feature:593303-593414:1:exon
so has part: feature:594113-594229:1:exon
so has part: feature:596368-596421:1:exon
so has part: feature:596505-596585:1:exon
so has part: feature:603098-603160:1:exon
so has part: feature:605835-605920:1:exon
so has part: feature:608555-608635:1:exon
so has part: feature:610329-610392:1:exon
so has part: feature:612339-612437:1:exon
so has part: feature:614307-614384:1:exon
so has part: feature:614671-614785:1:exon
so has part: feature:630556-630695:1:exon
so has part: feature:633266-633431:1:exon
so has part: feature:634990-635108:1:exon
so has part: feature:650357-650503:1:exon
so has part: feature:653963-655537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580558-580819:1:exon

position:580819:1
position: 580819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580935-581012:1:exon

position:580935:1
position: 580935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581012:1
position: 581012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:583460-583582:1:exon

position:583460:1
position: 583460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583582:1
position: 583582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:593133-593179:1:exon

position:593133:1
position: 593133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593179:1
position: 593179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:593303-593414:1:exon

position:593303:1
position: 593303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593414:1
position: 593414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:594113-594229:1:exon

position:594113:1
position: 594113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594229:1
position: 594229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:596368-596421:1:exon

position:596368:1
position: 596368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596421:1
position: 596421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:596505-596585:1:exon

position:596505:1
position: 596505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596585:1
position: 596585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:603098-603160:1:exon

position:603098:1
position: 603098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603160:1
position: 603160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:605835-605920:1:exon

position:605835:1
position: 605835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605920:1
position: 605920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:608555-608635:1:exon

position:608555:1
position: 608555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608635:1
position: 608635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:610329-610392:1:exon

position:610329:1
position: 610329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610392:1
position: 610392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:612339-612437:1:exon

position:612339:1
position: 612339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612437:1
position: 612437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:614307-614384:1:exon

position:614307:1
position: 614307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614384:1
position: 614384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:614671-614785:1:exon

position:614671:1
position: 614671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614785:1
position: 614785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:630556-630695:1:exon

position:630556:1
position: 630556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630695:1
position: 630695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:633266-633431:1:exon

position:633266:1
position: 633266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633431:1
position: 633431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:634990-635108:1:exon

position:634990:1
position: 634990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635108:1
position: 635108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:650357-650503:1:exon

position:650357:1
position: 650357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650503:1
position: 650503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:653963-655537:1:exon

position:653963:1
position: 653963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vps35l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: vps35l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: VPS35 endosomal protein-sorting factor-like
translation: MIRGIGDPLVAVYARAYLCKVGMEVAPHLKDNLNKNFFDFLSTFKQIHGETVQNQLAVQRVEIPVYLTLYSPAIDWILQCIAYRAPETLLTEMMDRCKTLGNNALLLNSVMSAFRPEFIAARSMDFIGMIKDCEESGFPKHLLFQSLGLNLALADPPENDRLQILNEAWKVITKLKSPQDYVNCAEVWIEYTCKHFTKREVNTVLSDVIKHLTPDRAFEDAYPQLQSIIAKVLDQFHDFAVLFSMEKFLPFLDMFQKECVKVEVCKSIMNVFIRQQQELTRDPVILNALMHICKTMHDSVNALTLEDEKRSLAILISGFIRMVSFGRDFEQQLSFYVEARSTFCNLEPVLIQLIHSVNQLAMETKKVMKGNHSRKTAAFVRACAAYCFITIPSLTSIFARLNLYLLSGQIALANQCLSQADAFFKAAISLVAEVPKMINIDGKMRTSEGFLLEFLNNFFSTLLMVPDHPEQGVLYLVRGLLNVIQDYIWEDHSDSKVRIYINVLHLLAAASQETYLYHVDKVDSNDNLYGSDPKFLAEINKLAETLIGQILDHLKTLGKDETLKRQSALALSLFNSILAHGDLQNHKLNQLTINLWNLAQKHGFADTKIMVRTLEHIKRQSKQPNMSHFADLTVRLPLQSRT
SIO_010081: vps35l
subclass of: SO_0000673
so part of: vps35l
location: join(580760..580819,580935..581012,583460..583582,593133..593179,593303..593414,594113..594229,596368..596421,596505..596585,603098..603160,605835..605920,608555..608635,610329..610392,612339..612437,614307..614384,614671..614785,630556..630695,633266..633431,634990..635108,650357..650503,653963..654061)
location: region:580760-654061:1
so has part: feature:580760-580819:1:exon
so has part: feature:580935-581012:1:exon
so has part: feature:583460-583582:1:exon
so has part: feature:593133-593179:1:exon
so has part: feature:593303-593414:1:exon
so has part: feature:594113-594229:1:exon
so has part: feature:596368-596421:1:exon
so has part: feature:596505-596585:1:exon
so has part: feature:603098-603160:1:exon
so has part: feature:605835-605920:1:exon
so has part: feature:608555-608635:1:exon
so has part: feature:610329-610392:1:exon
so has part: feature:612339-612437:1:exon
so has part: feature:614307-614384:1:exon
so has part: feature:614671-614785:1:exon
so has part: feature:630556-630695:1:exon
so has part: feature:633266-633431:1:exon
so has part: feature:634990-635108:1:exon
so has part: feature:650357-650503:1:exon
so has part: feature:653963-654061:1:exon

XP_048465326.1
type: Protein
SIO_000068: ncbiprotein

position:580760:1
position: 580760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654061:1
position: 654061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580760-580819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580935-581012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583460-583582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593133-593179:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593303-593414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594113-594229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596368-596421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:596505-596585:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:603098-603160:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:605835-605920:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608555-608635:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610329-610392:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:612339-612437:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614307-614384:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614671-614785:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630556-630695:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:633266-633431:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:634990-635108:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:650357-650503:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:653963-654061:1:exon

LOC109921786
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109921786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(626010..667823)
location: region:626010-667823:-1
so has part: feature:626010-667823:-1:exon
subclass of: SO_0000011

109921786
type: Gene
SIO_000068: ncbigene

position:626010:-1
position: 626010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667823:-1
position: 667823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626010-667823:-1:exon

LOC109921786
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109921786
product: uncharacterized LOC109921786, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007264351.1
SIO_010081: LOC109921786
subclass of: SO_0000673
so part of: LOC109921786
location: complement(join(626010..627098,658704..658798,660410..660789,667087..667212))
location: region:626010-667212:-1
so has part: feature:667087-667212:-1:exon
so has part: feature:660410-660789:-1:exon
so has part: feature:658704-658798:-1:exon
so has part: feature:626010-627098:-1:exon

position:667212:-1
position: 667212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667087-667212:-1:exon

position:667087:-1
position: 667087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660410-660789:-1:exon

position:660410:-1
position: 660410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660789:-1
position: 660789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:658704-658798:-1:exon

position:658704:-1
position: 658704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658798:-1
position: 658798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:626010-627098:-1:exon

position:627098:-1
position: 627098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109921786
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109921786
product: uncharacterized LOC109921786, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007264350.1
SIO_010081: LOC109921786
subclass of: SO_0000673
so part of: LOC109921786
location: complement(join(650183..650419,658704..658798,660410..660789,667087..667212))
location: region:650183-667212:-1
so has part: feature:667087-667212:-1:exon
so has part: feature:660410-660789:-1:exon
so has part: feature:658704-658798:-1:exon
so has part: feature:650183-650419:-1:exon

position:650183:-1
position: 650183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667087-667212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660410-660789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658704-658798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650183-650419:-1:exon

position:650419:-1
position: 650419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109921786
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109921786
product: uncharacterized LOC109921786, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_002259495.2
SIO_010081: LOC109921786
subclass of: SO_0000673
so part of: LOC109921786
location: complement(join(660016..660789,667087..667823))
location: region:660016-667823:-1
so has part: feature:667087-667823:-1:exon
so has part: feature:660016-660789:-1:exon

position:660016:-1
position: 660016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667087-667823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660016-660789:-1:exon

LOC109919806
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(670925..730316)
location: region:670925-730316:-1
so has part: feature:670925-730316:-1:exon
subclass of: SO_0000010

109919806
type: Gene
SIO_000068: ncbigene

position:670925:-1
position: 670925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730316:-1
position: 730316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670925-730316:-1:exon

LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048609609.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670925..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724039,730230..730316))
location: region:670925-730316:-1
so has part: feature:730230-730316:-1:exon
so has part: feature:723871-724039:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670925-671043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730230-730316:-1:exon

position:730230:-1
position: 730230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723871-724039:-1:exon

position:723871:-1
position: 723871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724039:-1
position: 724039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:720839-720967:-1:exon

position:720839:-1
position: 720839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720967:-1
position: 720967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:708199-709840:-1:exon

position:708199:-1
position: 708199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709840:-1
position: 709840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:694427-694554:-1:exon

position:694427:-1
position: 694427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694554:-1
position: 694554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:689559-689736:-1:exon

position:689559:-1
position: 689559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689736:-1
position: 689736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:685314-685432:-1:exon

position:685314:-1
position: 685314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685432:-1
position: 685432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:683090-683206:-1:exon

position:683090:-1
position: 683090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683206:-1
position: 683206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:682644-682745:-1:exon

position:682644:-1
position: 682644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682745:-1
position: 682745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:682441-682557:-1:exon

position:682441:-1
position: 682441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682557:-1
position: 682557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:680873-680952:-1:exon

position:680873:-1
position: 680873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680952:-1
position: 680952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:680546-680614:-1:exon

position:680546:-1
position: 680546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680614:-1
position: 680614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:680407-680466:-1:exon

position:680407:-1
position: 680407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680466:-1
position: 680466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:674635-674714:-1:exon

position:674635:-1
position: 674635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674714:-1
position: 674714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:670925-671043:-1:exon

position:671043:-1
position: 671043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048609606.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670925..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724039,729520..729561,730230..730312))
location: region:670925-730312:-1
so has part: feature:730230-730312:-1:exon
so has part: feature:729520-729561:-1:exon
so has part: feature:723871-724039:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670925-671043:-1:exon

position:730312:-1
position: 730312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730230-730312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729520-729561:-1:exon

position:729520:-1
position: 729520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729561:-1
position: 729561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723871-724039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:670925-671043:-1:exon

LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048609608.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670925..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724041,730182..730287))
location: region:670925-730287:-1
so has part: feature:730182-730287:-1:exon
so has part: feature:723871-724041:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
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position:730287:-1
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urn:…
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SIO_000628: feature:730182-730287:-1:exon

position:730182:-1
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reference: sequence
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urn:…
SIO_000300: 2
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urn:…
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LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048609611.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670925..671043,674635..674714,680407..680466,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724039,729520..729563,730182..730270))
location: region:670925-730270:-1
so has part: feature:730182-730270:-1:exon
so has part: feature:729520-729563:-1:exon
so has part: feature:723871-724039:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
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so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670925-671043:-1:exon

position:730270:-1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:730182-730270:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729520-729563:-1:exon

position:729563:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 15
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LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048609612.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670925..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,723871..724039,729520..729563,730182..730269))
location: region:670925-730269:-1
so has part: feature:730182-730269:-1:exon
so has part: feature:729520-729563:-1:exon
so has part: feature:723871-724039:-1:exon
so has part: feature:708199-709840:-1:exon
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so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670925-671043:-1:exon

position:730269:-1
position: 730269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730182-730269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729520-729563:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 12
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SIO_000300: 13
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LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048609603.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670925..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724039,729520..729563,730182..730269))
location: region:670925-730269:-1
so has part: feature:730182-730269:-1:exon
so has part: feature:729520-729563:-1:exon
so has part: feature:723871-724039:-1:exon
so has part: feature:720839-720967:-1:exon
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so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670925-671043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730182-730269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729520-729563:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 8
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SIO_000300: 10
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SIO_000300: 11
SIO_000628: feature:682441-682557:-1:exon

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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 14
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urn:…
SIO_000300: 16
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LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048609605.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670925..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724039,729520..729561,730138..730168))
location: region:670925-730168:-1
so has part: feature:730138-730168:-1:exon
so has part: feature:729520-729561:-1:exon
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so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670925-671043:-1:exon

position:730168:-1
position: 730168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730138-730168:-1:exon

position:730138:-1
position: 730138
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:729520-729561:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 16
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LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048609610.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670925..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724039,730138..730163))
location: region:670925-730163:-1
so has part: feature:730138-730163:-1:exon
so has part: feature:723871-724039:-1:exon
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so has part: feature:708199-709840:-1:exon
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so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670925-671043:-1:exon

position:730163:-1
position: 730163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730138-730163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723871-724039:-1:exon

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SIO_000300: 3
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SIO_000300: 12
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SIO_000300: 15
SIO_000628: feature:670925-671043:-1:exon

LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048609607.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670925..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724039,729520..729561,729675..729755))
location: region:670925-729755:-1
so has part: feature:729675-729755:-1:exon
so has part: feature:729520-729561:-1:exon
so has part: feature:723871-724039:-1:exon
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so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670925-671043:-1:exon

position:729755:-1
position: 729755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729675-729755:-1:exon

position:729675:-1
position: 729675
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:729520-729561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723871-724039:-1:exon

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SIO_000300: 4
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SIO_000300: 6
SIO_000628: feature:694427-694554:-1:exon

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SIO_000628: feature:682441-682557:-1:exon

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SIO_000300: 12
SIO_000628: feature:680873-680952:-1:exon

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SIO_000628: feature:680546-680614:-1:exon

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SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:670925-671043:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X3
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKAAEMAITSKQKSHVKQKASSETRILQPSQGQNAPARRLLHRQGIQTSRKGVEQNRERYPESRFPKKAVPGACPGRVLKTKSSVTTF
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670991..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,723871..724017))
location: region:670991-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670991-671043:-1:exon

XP_048465569.1
type: Protein
SIO_000068: ncbiprotein

position:670991:-1
position: 670991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724017:-1
position: 724017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:670991-671043:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X2
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLMNSERKLEMQQYRQKAVELELRRQKARKNALLTRVQEIIENVQVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKILQPSQGQNAPARRLLHRQGIQTSRKGVEQNRERYPESRFPKKAVPGACPGRVLKTKSSVTTF
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670991..671043,674635..674714,680407..680466,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724017))
location: region:670991-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670991-671043:-1:exon

XP_048465568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:670991-671043:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X1
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLMNSERKLEMQQYRQKAVELELRRQKARKNALLTRVQEIIENVQVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKAAEMAITSKQKSHVKQKASSETRILQPSQGQNAPARRLLHRQGIQTSRKGVEQNRERYPESRFPKKAVPGACPGRVLKTKSSVTTF
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670991..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724017))
location: region:670991-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670991-671043:-1:exon

XP_048465560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:670991-671043:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X1
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLMNSERKLEMQQYRQKAVELELRRQKARKNALLTRVQEIIENVQVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKAAEMAITSKQKSHVKQKASSETRILQPSQGQNAPARRLLHRQGIQTSRKGVEQNRERYPESRFPKKAVPGACPGRVLKTKSSVTTF
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670991..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724017))
location: region:670991-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670991-671043:-1:exon

XP_048465562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:670991-671043:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X1
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLMNSERKLEMQQYRQKAVELELRRQKARKNALLTRVQEIIENVQVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKAAEMAITSKQKSHVKQKASSETRILQPSQGQNAPARRLLHRQGIQTSRKGVEQNRERYPESRFPKKAVPGACPGRVLKTKSSVTTF
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670991..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724017))
location: region:670991-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670991-671043:-1:exon

XP_048465563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:670991-671043:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X1
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLMNSERKLEMQQYRQKAVELELRRQKARKNALLTRVQEIIENVQVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKAAEMAITSKQKSHVKQKASSETRILQPSQGQNAPARRLLHRQGIQTSRKGVEQNRERYPESRFPKKAVPGACPGRVLKTKSSVTTF
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670991..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724017))
location: region:670991-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670991-671043:-1:exon

XP_048465564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:670991-671043:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X1
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLMNSERKLEMQQYRQKAVELELRRQKARKNALLTRVQEIIENVQVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKAAEMAITSKQKSHVKQKASSETRILQPSQGQNAPARRLLHRQGIQTSRKGVEQNRERYPESRFPKKAVPGACPGRVLKTKSSVTTF
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670991..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724017))
location: region:670991-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670991-671043:-1:exon

XP_048465565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:670991-671043:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X1
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLMNSERKLEMQQYRQKAVELELRRQKARKNALLTRVQEIIENVQVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKAAEMAITSKQKSHVKQKASSETRILQPSQGQNAPARRLLHRQGIQTSRKGVEQNRERYPESRFPKKAVPGACPGRVLKTKSSVTTF
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670991..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724017))
location: region:670991-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670991-671043:-1:exon

XP_048465566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:670991-671043:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X1
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLMNSERKLEMQQYRQKAVELELRRQKARKNALLTRVQEIIENVQVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKAAEMAITSKQKSHVKQKASSETRILQPSQGQNAPARRLLHRQGIQTSRKGVEQNRERYPESRFPKKAVPGACPGRVLKTKSSVTTF
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(670991..671043,674635..674714,680407..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724017))
location: region:670991-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680407-680466:-1:exon
so has part: feature:674635-674714:-1:exon
so has part: feature:670991-671043:-1:exon

XP_048465567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680407-680466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674635-674714:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:670991-671043:-1:exon

LOC109919806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919806
product: centriolar coiled-coil protein of 110 kDa, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048609613.1
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(680403..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724039,729520..729563,730182..730270))
location: region:680403-730270:-1
so has part: feature:730182-730270:-1:exon
so has part: feature:729520-729563:-1:exon
so has part: feature:723871-724039:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680403-680466:-1:exon

position:680403:-1
position: 680403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730182-730270:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729520-729563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723871-724039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:680403-680466:-1:exon

LOC109919806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriolar coiled-coil protein of 110 kDa isoform X4
translation: MTMEEYEEFCNRHLARIQTEMVENKSLESMWPKNNSVIQFYGIAALCPLMNSERKLEMQQYRQKAVELELRRQKARKNALLTRVQEIIENVQVCHVPSATECVKDPGSQSPTKIDPTSCFSTVQHTDQSSVTSNCSDKPEDTTVSTATSLKLTEINAARDSEKCVYSSQLSDLPKLTCNGQSNNIVSLCMSPKKEESKTDVLLPTKESPDHYAMSLQNLLKKSREYVEREQNRRSGKNVSKESTSESHSDKENEGVKISDWEKERNKISTKTWSPILETSSARSTSQPQDASATNESSELFNKTTGSTLASVLGSLSKVNLTEKSTKGSSRESDSDEDWINCSESEHDSSLLKSLMGSYAKLPNPEPSRSPKMHQRRPRTSTNIVINNPVNAYELSPKEKFKGLSGIPLGKININNLDAKRAVLNEALIAVNQEETEQNAGKVQDVPTCLGSVDEMPRKGCLHLCAKPSGVSEVKTVGNAVQAPLSSLIQKDHDLERSSPLLVNKQEIIESLEPQIELNLSGQKTSSLMENAKQGSSIELNKSYDVKHPSPVLLQNQATRQQIDLSTMSSDNEKCLQSSIEAKAKRKLAMGTSSAKENKPTAVETVQEMSRWIRDERHQRVSLSRSETEVPPNNHIDALDEELITKQMMTFMEMRKQLEEQHTLQLSMLIAEQEKEQEKLRREIEEQERRFREQMNFVLESTENRYCKEASLDWKRISENYLISSLINRVDGHQSSSSSNIAFTSNSTNTESSLTGWGAGNDKMHEMQISCFLKQRNRWSQVNTSDMQKKFNKVTAVAKGFLTRRLMKTEKLKQLQQTVKDTLEFINNFQTEAPLKRGTVSSQDLSLHERVVAQLRAALYEIHDIFFVFNPEERMQILCHDREIRKEKQLRQMEKWKSPKEKGALSIATQKSLDRKRQIKAAEMAITSKQKSHVKQKASSETRILQPSQGQNAPARRLLHRQG
SIO_010081: LOC109919806
subclass of: SO_0000673
so part of: LOC109919806
location: complement(join(680403..680466,680546..680614,680873..680952,682441..682557,682644..682745,683090..683206,685314..685432,689559..689736,694427..694554,708199..709840,720839..720967,723871..724017))
location: region:680403-724017:-1
so has part: feature:723871-724017:-1:exon
so has part: feature:720839-720967:-1:exon
so has part: feature:708199-709840:-1:exon
so has part: feature:694427-694554:-1:exon
so has part: feature:689559-689736:-1:exon
so has part: feature:685314-685432:-1:exon
so has part: feature:683090-683206:-1:exon
so has part: feature:682644-682745:-1:exon
so has part: feature:682441-682557:-1:exon
so has part: feature:680873-680952:-1:exon
so has part: feature:680546-680614:-1:exon
so has part: feature:680403-680466:-1:exon

XP_048465570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723871-724017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720839-720967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708199-709840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694427-694554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689559-689736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685314-685432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683090-683206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682644-682745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682441-682557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680873-680952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:680546-680614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680403-680466:-1:exon

LOC125485674
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 730332..747676
location: region:730332-747676:1
so has part: feature:730332-747676:1:exon
subclass of: SO_0000011

125485674
type: Gene
SIO_000068: ncbigene

position:730332:1
position: 730332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747676:1
position: 747676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730332-747676:1:exon

LOC125485674
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485674
product: uncharacterized LOC125485674
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007264393.1
SIO_010081: LOC125485674
subclass of: SO_0000673
so part of: LOC125485674
location: join(730332..730353,744647..745049,747649..747676)
location: region:730332-747676:1
so has part: feature:730332-730353:1:exon
so has part: feature:744647-745049:1:exon
so has part: feature:747649-747676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730332-730353:1:exon

position:730353:1
position: 730353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744647-745049:1:exon

position:744647:1
position: 744647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745049:1
position: 745049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:747649-747676:1:exon

position:747649:1
position: 747649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gde1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: gde1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 750045..776104
location: region:750045-776104:1
so has part: feature:750045-776104:1:exon
subclass of: SO_0000010

109919805
type: Gene
SIO_000068: ncbigene

position:750045:1
position: 750045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776104:1
position: 776104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750045-776104:1:exon

gde1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gde1
product: glycerophosphodiester phosphodiesterase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020519830.2
SIO_010081: gde1
subclass of: SO_0000673
so part of: gde1
location: join(750045..750413,754646..754821,756180..756285,765205..765297,765494..765702,772279..776104)
location: region:750045-776104:1
so has part: feature:750045-750413:1:exon
so has part: feature:754646-754821:1:exon
so has part: feature:756180-756285:1:exon
so has part: feature:765205-765297:1:exon
so has part: feature:765494-765702:1:exon
so has part: feature:772279-776104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750045-750413:1:exon

position:750413:1
position: 750413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754646-754821:1:exon

position:754646:1
position: 754646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754821:1
position: 754821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756180-756285:1:exon

position:756180:1
position: 756180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756285:1
position: 756285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:765205-765297:1:exon

position:765205:1
position: 765205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765297:1
position: 765297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:765494-765702:1:exon

position:765494:1
position: 765494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765702:1
position: 765702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:772279-776104:1:exon

position:772279:1
position: 772279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gde1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gde1
product: glycerophosphodiester phosphodiesterase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_048609542.1
SIO_010081: gde1
subclass of: SO_0000673
so part of: gde1
location: join(750137..750413,754646..754821,756180..756285,765205..765297,765494..765702,765951..766145)
location: region:750137-766145:1
so has part: feature:750137-750413:1:exon
so has part: feature:754646-754821:1:exon
so has part: feature:756180-756285:1:exon
so has part: feature:765205-765297:1:exon
so has part: feature:765494-765702:1:exon
so has part: feature:765951-766145:1:exon

position:750137:1
position: 750137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766145:1
position: 766145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750137-750413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754646-754821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756180-756285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765205-765297:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765494-765702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765951-766145:1:exon

position:765951:1
position: 765951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gde1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gde1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphodiester phosphodiesterase 1 isoform X1
translation: MDVTVVAGFLLLLAVVALLVVSVCHPVYFPVLVLGLCLAVQALRYPPVPPEVAQQVLRPNGRLSVVAHRGGGYDAPENTLGAIRKAAENNATGVELDLEFTSDGFPILMHDRTVDRTTDGIGSLDHLTFEDVRKLNPAAKHRLHKYFPNEKVPTLEEAIVESLKGNMTIYFDVKGHAAQASAALKKMYQEYPELYTKSIVCSFDPLVIFKMKQVDKNVATALTHRPWRLSFYGNGKPKFHDYRQYWYMLLDIILDWSLHAFLWKFFGISAFLMQKNFISMDYIRFWAERGVEVVAWTVNYSDEKRYYEKILHCIYITDSLIEKCSPAS
SIO_010081: gde1
subclass of: SO_0000673
so part of: gde1
location: join(750159..750413,754646..754821,756180..756285,765205..765297,765494..765702,772279..772426)
location: region:750159-772426:1
so has part: feature:750159-750413:1:exon
so has part: feature:754646-754821:1:exon
so has part: feature:756180-756285:1:exon
so has part: feature:765205-765297:1:exon
so has part: feature:765494-765702:1:exon
so has part: feature:772279-772426:1:exon

XP_020375419.1
type: Protein
SIO_000068: ncbiprotein

position:750159:1
position: 750159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772426:1
position: 772426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750159-750413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754646-754821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756180-756285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765205-765297:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765494-765702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772279-772426:1:exon

gde1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gde1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphodiester phosphodiesterase 1 isoform X2
translation: MDVTVVAGFLLLLAVVALLVVSVCHPVYFPVLVLGLCLAVQALRYPPVPPEVAQQVLRPNGRLSVVAHRGGGYDAPENTLGAIRKAAENNATGVELDLEFTSDGFPILMHDRTVDRTTDGIGSLDHLTFEDVRKLNPAAKHRLHKYFPNEKVPTLEEAIVESLKGNMTIYFDVKGHAAQASAALKKMYQEYPELYTKSIVCSFDPLVIFKMKQVDKNVATALTHRPWRLSFYGNGKPKFHDYRQYWYMLLDIILDWSLHAFLWKFFGISAFLMQKNFISMNG
SIO_010081: gde1
subclass of: SO_0000673
so part of: gde1
location: join(750159..750413,754646..754821,756180..756285,765205..765297,765494..765702,765951..765960)
location: region:750159-765960:1
so has part: feature:750159-750413:1:exon
so has part: feature:754646-754821:1:exon
so has part: feature:756180-756285:1:exon
so has part: feature:765205-765297:1:exon
so has part: feature:765494-765702:1:exon
so has part: feature:765951-765960:1:exon

XP_048465499.1
type: Protein
SIO_000068: ncbiprotein

position:765960:1
position: 765960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750159-750413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754646-754821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756180-756285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765205-765297:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765494-765702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765951-765960:1:exon

LOC109920661
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109920661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(786792..850484)
location: region:786792-850484:-1
so has part: feature:786792-850484:-1:exon
subclass of: SO_0000010

109920661
type: Gene
SIO_000068: ncbigene

position:786792:-1
position: 786792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850484:-1
position: 850484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786792-850484:-1:exon

LOC109920661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109920661
product: transmembrane channel-like protein 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609657.1
SIO_010081: LOC109920661
subclass of: SO_0000673
so part of: LOC109920661
location: complement(join(786792..788194,790014..790070,794137..794179,811940..812041,814514..814592,819971..820147,821957..822090,823090..823165,823277..823372,825278..825375,825575..825650,827995..828164,840435..840590,845105..845249,847662..847813,850141..850389,850479..850484))
location: region:786792-850484:-1
so has part: feature:850479-850484:-1:exon
so has part: feature:850141-850389:-1:exon
so has part: feature:847662-847813:-1:exon
so has part: feature:845105-845249:-1:exon
so has part: feature:840435-840590:-1:exon
so has part: feature:827995-828164:-1:exon
so has part: feature:825575-825650:-1:exon
so has part: feature:825278-825375:-1:exon
so has part: feature:823277-823372:-1:exon
so has part: feature:823090-823165:-1:exon
so has part: feature:821957-822090:-1:exon
so has part: feature:819971-820147:-1:exon
so has part: feature:814514-814592:-1:exon
so has part: feature:811940-812041:-1:exon
so has part: feature:794137-794179:-1:exon
so has part: feature:790014-790070:-1:exon
so has part: feature:786792-788194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850479-850484:-1:exon

position:850479:-1
position: 850479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:850141-850389:-1:exon

position:850141:-1
position: 850141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850389:-1
position: 850389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:847662-847813:-1:exon

position:847662:-1
position: 847662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847813:-1
position: 847813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:845105-845249:-1:exon

position:845105:-1
position: 845105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845249:-1
position: 845249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:840435-840590:-1:exon

position:840435:-1
position: 840435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840590:-1
position: 840590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:827995-828164:-1:exon

position:827995:-1
position: 827995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828164:-1
position: 828164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:825575-825650:-1:exon

position:825575:-1
position: 825575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825650:-1
position: 825650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:825278-825375:-1:exon

position:825278:-1
position: 825278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825375:-1
position: 825375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:823277-823372:-1:exon

position:823277:-1
position: 823277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823372:-1
position: 823372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:823090-823165:-1:exon

position:823090:-1
position: 823090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823165:-1
position: 823165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:821957-822090:-1:exon

position:821957:-1
position: 821957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822090:-1
position: 822090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:819971-820147:-1:exon

position:819971:-1
position: 819971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820147:-1
position: 820147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:814514-814592:-1:exon

position:814514:-1
position: 814514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814592:-1
position: 814592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:811940-812041:-1:exon

position:811940:-1
position: 811940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812041:-1
position: 812041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:794137-794179:-1:exon

position:794137:-1
position: 794137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794179:-1
position: 794179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:790014-790070:-1:exon

position:790014:-1
position: 790014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790070:-1
position: 790070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:786792-788194:-1:exon

position:788194:-1
position: 788194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109920661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109920661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane channel-like protein 5
translation: MESLRRFRENMFIYFQSVHPWKRSLKIIGGKFGTSVLSYFTFLKWLLMFNLFSFLINFSFITIPQFFDMGTNNVTFTGMELLTGSGYFTRTVFYYGFYTNASIQANPTAKMYNMQVAYFLTIGCYMLSCFLYLVYSMAKSFNENFIAVGILSGDAAKLLCSWDFNITNEKAVELKKRNISRQLKEMLSEKMHYHRHLSTKQRILRYLIHLMAWIISLGTTFGCCFGIHSFSISNFKIIQKNPTEEDLYKQASTLILPFVVAIINLFIPLFFSFLGSMERFKYPRDETYVLIIRNVVLKMSVIGVLCYYWLVTVANTVECWETFVGQDLYRLVVTDFIFSLLGSFFGEFIRSIMGTHCCHKLGKPEFDIPRNVLGLIYAQVLAWIGLFFAPLLPAIQIIKFFIIFHVKKVSLMMNCQPPRKAWRASHMTTIFIFLLFFPGFLGVLCLLGVTVWKWKPSKLCGPFRGLNVPYSTISHFIAVIQKTVYHLQWLVWCYNNLIMNPLFYFILTIIVFAIIYLYSQIIDGRKLMIKLLQEHISNEGKDKAYLLRKLNSMKLKMESSREKFHTMKINDESIRHLEAKFEDRKPSSLNMKNMQDQDVISDQNTEQRSYSPNVNRNTASALALALAAKHQAEQDPNE
SIO_010081: LOC109920661
subclass of: SO_0000673
so part of: LOC109920661
location: complement(join(788094..788194,790014..790070,794137..794179,811940..812041,814514..814592,819971..820147,821957..822090,823090..823165,823277..823372,825278..825375,825575..825650,827995..828164,840435..840590,845105..845249,847662..847813,850141..850389,850479..850484))
location: region:788094-850484:-1
so has part: feature:850479-850484:-1:exon
so has part: feature:850141-850389:-1:exon
so has part: feature:847662-847813:-1:exon
so has part: feature:845105-845249:-1:exon
so has part: feature:840435-840590:-1:exon
so has part: feature:827995-828164:-1:exon
so has part: feature:825575-825650:-1:exon
so has part: feature:825278-825375:-1:exon
so has part: feature:823277-823372:-1:exon
so has part: feature:823090-823165:-1:exon
so has part: feature:821957-822090:-1:exon
so has part: feature:819971-820147:-1:exon
so has part: feature:814514-814592:-1:exon
so has part: feature:811940-812041:-1:exon
so has part: feature:794137-794179:-1:exon
so has part: feature:790014-790070:-1:exon
so has part: feature:788094-788194:-1:exon

XP_048465614.1
type: Protein
SIO_000068: ncbiprotein

position:788094:-1
position: 788094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850479-850484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850141-850389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847662-847813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845105-845249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:840435-840590:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:827995-828164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:825575-825650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825278-825375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:823277-823372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:823090-823165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821957-822090:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819971-820147:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:814514-814592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811940-812041:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:794137-794179:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:790014-790070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:788094-788194:-1:exon

trnav-uac
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnav-uac
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 810697..810769
location: region:810697-810769:1
so has part: feature:810697-810769:1:exon
subclass of: SO_0000663

125485724
type: Gene
SIO_000068: ncbigene

position:810697:1
position: 810697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810769:1
position: 810769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810697-810769:1:exon

trnav-uac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnav-uac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:810730..810732,aa:Val,seq:tac)
SIO_010081: trnav-uac
subclass of: SO_0000673
so part of: trnav-uac
location: 810697..810769
location: region:810697-810769:1
so has part: feature:810697-810769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:810697-810769:1:exon

LOC109938457
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109938457
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 997545..1101322
location: region:997545-1101322:1
so has part: feature:997545-1101322:1:exon
subclass of: SO_0000010

109938457
type: Gene
SIO_000068: ncbigene

position:997545:1
position: 997545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101322:1
position: 1101322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997545-1101322:1:exon

LOC109938457
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109938457
product: transmembrane channel-like protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048609836.1
SIO_010081: LOC109938457
subclass of: SO_0000673
so part of: LOC109938457
location: join(997545..997924,1012102..1012324,1033901..1034043,1037131..1037298,1043282..1043364,1052664..1052809,1053930..1054077,1058318..1058491,1066781..1066938,1070751..1070868,1076875..1076972,1081359..1081542,1082440..1082570,1084760..1084915,1088753..1088831,1095340..1101322)
location: region:997545-1101322:1
so has part: feature:997545-997924:1:exon
so has part: feature:1012102-1012324:1:exon
so has part: feature:1033901-1034043:1:exon
so has part: feature:1037131-1037298:1:exon
so has part: feature:1043282-1043364:1:exon
so has part: feature:1052664-1052809:1:exon
so has part: feature:1053930-1054077:1:exon
so has part: feature:1058318-1058491:1:exon
so has part: feature:1066781-1066938:1:exon
so has part: feature:1070751-1070868:1:exon
so has part: feature:1076875-1076972:1:exon
so has part: feature:1081359-1081542:1:exon
so has part: feature:1082440-1082570:1:exon
so has part: feature:1084760-1084915:1:exon
so has part: feature:1088753-1088831:1:exon
so has part: feature:1095340-1101322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997545-997924:1:exon

position:997924:1
position: 997924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1012102-1012324:1:exon

position:1012102:1
position: 1012102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012324:1
position: 1012324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1033901-1034043:1:exon

position:1033901:1
position: 1033901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034043:1
position: 1034043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1037131-1037298:1:exon

position:1037131:1
position: 1037131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037298:1
position: 1037298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1043282-1043364:1:exon

position:1043282:1
position: 1043282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043364:1
position: 1043364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1052664-1052809:1:exon

position:1052664:1
position: 1052664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052809:1
position: 1052809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1053930-1054077:1:exon

position:1053930:1
position: 1053930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054077:1
position: 1054077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1058318-1058491:1:exon

position:1058318:1
position: 1058318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058491:1
position: 1058491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1066781-1066938:1:exon

position:1066781:1
position: 1066781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066938:1
position: 1066938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1070751-1070868:1:exon

position:1070751:1
position: 1070751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070868:1
position: 1070868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1076875-1076972:1:exon

position:1076875:1
position: 1076875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076972:1
position: 1076972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1081359-1081542:1:exon

position:1081359:1
position: 1081359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081542:1
position: 1081542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1082440-1082570:1:exon

position:1082440:1
position: 1082440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082570:1
position: 1082570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1084760-1084915:1:exon

position:1084760:1
position: 1084760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084915:1
position: 1084915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1088753-1088831:1:exon

position:1088753:1
position: 1088753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088831:1
position: 1088831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1095340-1101322:1:exon

position:1095340:1
position: 1095340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109938457
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109938457
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane channel-like protein 7
translation: MQLEKPSPSKSRTSGFFLSLNPLLHELPSYQSLIRRTSAGKGSTKRRNTVPSYLFTSLTHRRTGSDELEQNIGPLREMPVSIEEKKRIRASPDYQTYMLTKYDQGRLFRKRARFIQTVKERLSSLYLWKTDIHDIEGKFGTGIRSYFSFLRFLVLLNFVIFLLMFTLVTLPTIISKHQVVNTTYAEVPSSVVAQECTVYEQPKTKLVLFYSYVINLFSGTGFLEQTYLFYGFYKFDYLSSGNFHYNLSLAYFMATCFYILLSLFWVVKRAVEGFKQSFIRSEDRFQSFCNKIFAGWDFCITDQHAAELKHSSLQYELKTDLNEERMKQKIADRTKKEKFRIYLLRVFLNLVVVMILFICFYCIYETTVFSQKANKRAGHVEAFTSDLVVEYLPSIVITAANFITPRLFERIIQFEDYSPAFEIKFILIRSVFVRLANIIVLLLSLWSQITTCDDDACKPCGYNNKLYPCWETRIGQEMYKLMIFDLIIISSVALFVEFPRKLIVTYCTWAPFKWWGQQQFSVPQNVLEIVYGQTICWIGTFYSPLLPGIATIKYFIIFYIKKISLMNNCRPSTRPFRASSSNFFFLAVLLIGLPLACVPIVFSVGVIKSSKSCGPFVKYNISWHVIPATIDRFPKGFNKLLYGLASEAFAVPFFLFVCLILFYLVALAGAHKRVIDQLREQLAMHGRDKQYLIKKLTRDSLHLKNRSTTSTIQEN
SIO_010081: LOC109938457
subclass of: SO_0000673
so part of: LOC109938457
location: join(997882..997924,1012102..1012324,1033901..1034043,1037131..1037298,1043282..1043364,1052664..1052809,1053930..1054077,1058318..1058491,1066781..1066938,1070751..1070868,1076875..1076972,1081359..1081542,1082440..1082570,1084760..1084915,1088753..1088831,1095340..1095435)
location: region:997882-1095435:1
so has part: feature:997882-997924:1:exon
so has part: feature:1012102-1012324:1:exon
so has part: feature:1033901-1034043:1:exon
so has part: feature:1037131-1037298:1:exon
so has part: feature:1043282-1043364:1:exon
so has part: feature:1052664-1052809:1:exon
so has part: feature:1053930-1054077:1:exon
so has part: feature:1058318-1058491:1:exon
so has part: feature:1066781-1066938:1:exon
so has part: feature:1070751-1070868:1:exon
so has part: feature:1076875-1076972:1:exon
so has part: feature:1081359-1081542:1:exon
so has part: feature:1082440-1082570:1:exon
so has part: feature:1084760-1084915:1:exon
so has part: feature:1088753-1088831:1:exon
so has part: feature:1095340-1095435:1:exon

XP_048465793.1
type: Protein
SIO_000068: ncbiprotein

position:997882:1
position: 997882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095435:1
position: 1095435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997882-997924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1012102-1012324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033901-1034043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037131-1037298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043282-1043364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1052664-1052809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1053930-1054077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1058318-1058491:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1066781-1066938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1070751-1070868:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1076875-1076972:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1081359-1081542:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1082440-1082570:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1084760-1084915:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1088753-1088831:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1095340-1095435:1:exon

coq7
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: coq7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1134244..1150239
location: region:1134244-1150239:1
so has part: feature:1134244-1150239:1:exon
subclass of: SO_0000010

109919302
type: Gene
SIO_000068: ncbigene

position:1134244:1
position: 1134244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150239:1
position: 1150239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134244-1150239:1:exon

coq7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: coq7
product: coenzyme Q7 homolog, ubiquinone (yeast)
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020519290.2
SIO_010081: coq7
subclass of: SO_0000673
so part of: coq7
location: join(1134244..1134627,1136813..1136927,1142727..1142866,1147801..1147869,1150086..1150239)
location: region:1134244-1150239:1
so has part: feature:1134244-1134627:1:exon
so has part: feature:1136813-1136927:1:exon
so has part: feature:1142727-1142866:1:exon
so has part: feature:1147801-1147869:1:exon
so has part: feature:1150086-1150239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1134244-1134627:1:exon

position:1134627:1
position: 1134627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1136813-1136927:1:exon

position:1136813:1
position: 1136813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136927:1
position: 1136927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142727-1142866:1:exon

position:1142727:1
position: 1142727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142866:1
position: 1142866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1147801-1147869:1:exon

position:1147801:1
position: 1147801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147869:1
position: 1147869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1150086-1150239:1:exon

position:1150086:1
position: 1150086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

coq7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: coq7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-demethoxyubiquinone hydroxylase, mitochondrial
translation: MAMAGARVRVRVRVRVGVSALCLPSLLRNARPLQPSPWPGLTAVRALSGSAERTMLDRIIRVDHAGEYGANRIYAGQMAVLGRSPVGPIIQQMWDQEKEHLEKFNELIVDHRVRPTLLMPFWNVAGFVLGAGTALFGKEAAMACTVAVEESISQHYNNQIRMLMEEDPERHKELLEILKKFRDDEMEHHDTGLAHDAEMAPAYALLKNVIQAGCKAAIYASERI
SIO_010081: coq7
subclass of: SO_0000673
so part of: coq7
location: join(1134355..1134627,1136813..1136927,1142727..1142866,1147801..1147869,1150086..1150163)
location: region:1134355-1150163:1
so has part: feature:1134355-1134627:1:exon
so has part: feature:1136813-1136927:1:exon
so has part: feature:1142727-1142866:1:exon
so has part: feature:1147801-1147869:1:exon
so has part: feature:1150086-1150163:1:exon

XP_020374879.2
type: Protein
SIO_000068: ncbiprotein

position:1134355:1
position: 1134355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150163:1
position: 1150163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134355-1134627:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136813-1136927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142727-1142866:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147801-1147869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150086-1150163:1:exon

LOC109925981
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1241196..1264668
location: region:1241196-1264668:1
so has part: feature:1241196-1264668:1:exon
subclass of: SO_0000010

109925981
type: Gene
SIO_000068: ncbigene

position:1241196:1
position: 1241196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264668:1
position: 1264668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241196-1264668:1:exon

LOC109925981
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109925981
product: ITPRIP like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007264407.1
SIO_010081: LOC109925981
so part of: LOC109925981
location: join(1241196..1242736,1264645..1264668)
location: region:1241196-1264668:1
so has part: feature:1241196-1242736:1:exon
so has part: feature:1264645-1264668:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1241196-1242736:1:exon

position:1242736:1
position: 1242736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1264645-1264668:1:exon

position:1264645:1
position: 1264645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925981
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109925981
product: ITPRIP like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007264406.1
SIO_010081: LOC109925981
so part of: LOC109925981
location: join(1241196..1242736,1246390..1248436)
location: region:1241196-1248436:1
so has part: feature:1241196-1242736:1:exon
so has part: feature:1246390-1248436:1:exon

position:1248436:1
position: 1248436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241196-1242736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1246390-1248436:1:exon

position:1246390:1
position: 1246390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925981
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925981
product: ITPRIP like 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020525879.2
SIO_010081: LOC109925981
subclass of: SO_0000673
so part of: LOC109925981
location: 1241196..1243073
location: region:1241196-1243073:1
so has part: feature:1241196-1243073:1:exon

position:1243073:1
position: 1243073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241196-1243073:1:exon

LOC109925981
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2
translation: MPGHSGRRCRLFWLLASCLCAAFLCLRSELATQPEEEPSPLPVLQLSLAFLLCYSLIKSWCPVCPHQPCPVRAPSAHVARKVVLESYYEHQLRISPHVLGHSRAHVRQVVTELLRVGKCEQEGSTLAFRGDFLQIGSTYEQHQTNSLDCFDLLVPIKVPQALQLEPTFHIGPQSSLEGTAICRVKPCIKPEWARCQREFTESFCVRFGKQRALSSAQVLRWFHSKVLRCLNVIRFHCEQRCSISLAPLKDQLILKLLPRADYVCCHISLSVRLIPALHVGDSIFLVAQPCCRSQLLLPALSPGTLWAVYLSKHERKFLNWLKVQTPNNSCHLKCLQIMKALRDLGCREFDQQFSVQWNTILCSYNMKTALFHLLLKGPLAAWDDRFLMDRLEDLVLFWRERLQKQELMHFFLGNKNVPDFLTVPRKIKEVLPVNLLAGFDAALLDLVSFQLLKTWNCAHLIMKLNNHKHFARNC
SIO_010081: LOC109925981
subclass of: SO_0000673
so part of: LOC109925981
location: 1241241..1242665
location: region:1241241-1242665:1
so has part: feature:1241241-1242665:1:exon

XP_020381468.2
type: Protein
SIO_000068: ncbiprotein

position:1241241:1
position: 1241241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242665:1
position: 1242665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241241-1242665:1:exon

syt17
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: syt17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1348818..1405104
location: region:1348818-1405104:1
so has part: feature:1348818-1405104:1:exon
subclass of: SO_0000010

125485679
type: Gene
SIO_000068: ncbigene

position:1348818:1
position: 1348818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405104:1
position: 1405104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348818-1405104:1:exon

syt17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: syt17
product: synaptotagmin XVII
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048609659.1
SIO_010081: syt17
subclass of: SO_0000673
so part of: syt17
location: join(1348818..1348840,1349478..1349623,1372453..1373075,1384861..1384981,1385372..1385527,1405039..1405104)
location: region:1348818-1405104:1
so has part: feature:1348818-1348840:1:exon
so has part: feature:1349478-1349623:1:exon
so has part: feature:1372453-1373075:1:exon
so has part: feature:1384861-1384981:1:exon
so has part: feature:1385372-1385527:1:exon
so has part: feature:1405039-1405104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1348818-1348840:1:exon

position:1348840:1
position: 1348840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1349478-1349623:1:exon

position:1349478:1
position: 1349478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349623:1
position: 1349623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1372453-1373075:1:exon

position:1372453:1
position: 1372453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373075:1
position: 1373075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1384861-1384981:1:exon

position:1384861:1
position: 1384861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384981:1
position: 1384981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1385372-1385527:1:exon

position:1385372:1
position: 1385372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385527:1
position: 1385527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1405039-1405104:1:exon

position:1405039:1
position: 1405039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

syt17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: syt17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-17
translation: MEAVDCTRINDRNTDQETDAENANSDPPPTPQGISPDRKSSSDTSRSSYSFTRRISNLEAFRRPSSPLLDIKPIEFWAIGSKKEIVQPKVFRKAYVPEDYFRKFEPRLYSVDSNSDDVDTLTDDEILSKYQLGMLHFSTQYDLLHNYLIVRVIEARDLPSPISYDGSRQDMAHSNPYVKMCLLPDQKNSRQTGVKRKTQNPVFEERYTFEIPFLEAQRRTLLLTAVDFDKFSHHCVIGKVAMPLNEVDLVKGGHWWKALIPSSQNEVELGELLISLNYLPSAGRLNVDIIRAKQLLQTDMSQGSDPFVKVQLVHGLKLVKTKKTSCMKGTIDPFYNESFSFKVPVEELEDISLVFTGELPMY
SIO_010081: syt17
subclass of: SO_0000673
so part of: syt17
location: join(1348818..1348840,1349478..1349623,1372453..1373075,1384861..1384981,1385372..1385527,1405039..1405058)
location: region:1348818-1405058:1
so has part: feature:1348818-1348840:1:exon
so has part: feature:1349478-1349623:1:exon
so has part: feature:1372453-1373075:1:exon
so has part: feature:1384861-1384981:1:exon
so has part: feature:1385372-1385527:1:exon
so has part: feature:1405039-1405058:1:exon

XP_048465616.1
type: Protein
SIO_000068: ncbiprotein

position:1405058:1
position: 1405058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348818-1348840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349478-1349623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1372453-1373075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1384861-1384981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1385372-1385527:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1405039-1405058:1:exon

smg1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: smg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1549197..1719904
location: region:1549197-1719904:1
so has part: feature:1549197-1719904:1:exon
subclass of: SO_0000010

109916520
type: Gene
SIO_000068: ncbigene

position:1549197:1
position: 1549197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719904:1
position: 1719904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1549197-1719904:1:exon

smg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: smg1
product: SMG1 nonsense mediated mRNA decay associated PI3K related kinase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609660.1
SIO_010081: smg1
subclass of: SO_0000673
so part of: smg1
location: join(1549197..1549459,1585486..1585649,1598776..1598928,1602277..1602413,1602620..1602678,1603884..1604097,1604445..1604570,1604656..1604728,1605410..1605507,1607926..1608099,1608370..1608594,1609234..1609335,1613237..1613506,1615523..1615653,1616431..1616592,1616743..1616861,1616942..1617029,1617143..1617244,1618370..1618510,1618645..1618844,1621210..1621406,1621827..1621991,1623778..1623932,1631919..1632067,1634693..1634894,1642814..1642923,1644431..1644578,1647295..1647454,1647897..1648017,1649410..1649658,1650662..1650949,1651043..1651187,1652541..1652679,1652941..1653162,1659512..1659692,1662975..1663136,1665862..1666079,1667427..1667581,1674210..1674285,1674336..1674584,1680758..1680896,1680996..1681105,1681222..1681440,1682366..1682559,1684503..1684675,1685676..1685955,1686580..1686852,1687602..1687836,1687933..1688159,1695107..1695263,1695601..1695790,1698408..1698877,1699534..1699674,1701027..1701179,1702121..1702300,1704254..1704481,1708156..1708367,1712242..1712348,1713197..1713376,1713753..1713859,1717524..1719904)
location: region:1549197-1719904:1
so has part: feature:1549197-1549459:1:exon
so has part: feature:1585486-1585649:1:exon
so has part: feature:1598776-1598928:1:exon
so has part: feature:1602277-1602413:1:exon
so has part: feature:1602620-1602678:1:exon
so has part: feature:1603884-1604097:1:exon
so has part: feature:1604445-1604570:1:exon
so has part: feature:1604656-1604728:1:exon
so has part: feature:1605410-1605507:1:exon
so has part: feature:1607926-1608099:1:exon
so has part: feature:1608370-1608594:1:exon
so has part: feature:1609234-1609335:1:exon
so has part: feature:1613237-1613506:1:exon
so has part: feature:1615523-1615653:1:exon
so has part: feature:1616431-1616592:1:exon
so has part: feature:1616743-1616861:1:exon
so has part: feature:1616942-1617029:1:exon
so has part: feature:1617143-1617244:1:exon
so has part: feature:1618370-1618510:1:exon
so has part: feature:1618645-1618844:1:exon
so has part: feature:1621210-1621406:1:exon
so has part: feature:1621827-1621991:1:exon
so has part: feature:1623778-1623932:1:exon
so has part: feature:1631919-1632067:1:exon
so has part: feature:1634693-1634894:1:exon
so has part: feature:1642814-1642923:1:exon
so has part: feature:1644431-1644578:1:exon
so has part: feature:1647295-1647454:1:exon
so has part: feature:1647897-1648017:1:exon
so has part: feature:1649410-1649658:1:exon
so has part: feature:1650662-1650949:1:exon
so has part: feature:1651043-1651187:1:exon
so has part: feature:1652541-1652679:1:exon
so has part: feature:1652941-1653162:1:exon
so has part: feature:1659512-1659692:1:exon
so has part: feature:1662975-1663136:1:exon
so has part: feature:1665862-1666079:1:exon
so has part: feature:1667427-1667581:1:exon
so has part: feature:1674210-1674285:1:exon
so has part: feature:1674336-1674584:1:exon
so has part: feature:1680758-1680896:1:exon
so has part: feature:1680996-1681105:1:exon
so has part: feature:1681222-1681440:1:exon
so has part: feature:1682366-1682559:1:exon
so has part: feature:1684503-1684675:1:exon
so has part: feature:1685676-1685955:1:exon
so has part: feature:1686580-1686852:1:exon
so has part: feature:1687602-1687836:1:exon
so has part: feature:1687933-1688159:1:exon
so has part: feature:1695107-1695263:1:exon
so has part: feature:1695601-1695790:1:exon
so has part: feature:1698408-1698877:1:exon
so has part: feature:1699534-1699674:1:exon
so has part: feature:1701027-1701179:1:exon
so has part: feature:1702121-1702300:1:exon
so has part: feature:1704254-1704481:1:exon
so has part: feature:1708156-1708367:1:exon
so has part: feature:1712242-1712348:1:exon
so has part: feature:1713197-1713376:1:exon
so has part: feature:1713753-1713859:1:exon
so has part: feature:1717524-1719904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1549197-1549459:1:exon

position:1549459:1
position: 1549459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1585486-1585649:1:exon

position:1585486:1
position: 1585486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585649:1
position: 1585649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1598776-1598928:1:exon

position:1598776:1
position: 1598776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598928:1
position: 1598928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1602277-1602413:1:exon

position:1602277:1
position: 1602277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602413:1
position: 1602413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1602620-1602678:1:exon

position:1602620:1
position: 1602620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602678:1
position: 1602678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1603884-1604097:1:exon

position:1603884:1
position: 1603884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604097:1
position: 1604097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1604445-1604570:1:exon

position:1604445:1
position: 1604445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604570:1
position: 1604570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1604656-1604728:1:exon

position:1604656:1
position: 1604656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604728:1
position: 1604728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1605410-1605507:1:exon

position:1605410:1
position: 1605410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605507:1
position: 1605507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1607926-1608099:1:exon

position:1607926:1
position: 1607926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608099:1
position: 1608099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1608370-1608594:1:exon

position:1608370:1
position: 1608370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608594:1
position: 1608594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1609234-1609335:1:exon

position:1609234:1
position: 1609234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1609335:1
position: 1609335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1613237-1613506:1:exon

position:1613237:1
position: 1613237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613506:1
position: 1613506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1615523-1615653:1:exon

position:1615523:1
position: 1615523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615653:1
position: 1615653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1616431-1616592:1:exon

position:1616431:1
position: 1616431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616592:1
position: 1616592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1616743-1616861:1:exon

position:1616743:1
position: 1616743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616861:1
position: 1616861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1616942-1617029:1:exon

position:1616942:1
position: 1616942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617029:1
position: 1617029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1617143-1617244:1:exon

position:1617143:1
position: 1617143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617244:1
position: 1617244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1618370-1618510:1:exon

position:1618370:1
position: 1618370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618510:1
position: 1618510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1618645-1618844:1:exon

position:1618645:1
position: 1618645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618844:1
position: 1618844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1621210-1621406:1:exon

position:1621210:1
position: 1621210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621406:1
position: 1621406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1621827-1621991:1:exon

position:1621827:1
position: 1621827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621991:1
position: 1621991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1623778-1623932:1:exon

position:1623778:1
position: 1623778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623932:1
position: 1623932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1631919-1632067:1:exon

position:1631919:1
position: 1631919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632067:1
position: 1632067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1634693-1634894:1:exon

position:1634693:1
position: 1634693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634894:1
position: 1634894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1642814-1642923:1:exon

position:1642814:1
position: 1642814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1642923:1
position: 1642923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1644431-1644578:1:exon

position:1644431:1
position: 1644431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1644578:1
position: 1644578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1647295-1647454:1:exon

position:1647295:1
position: 1647295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647454:1
position: 1647454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1647897-1648017:1:exon

position:1647897:1
position: 1647897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648017:1
position: 1648017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1649410-1649658:1:exon

position:1649410:1
position: 1649410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1649658:1
position: 1649658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1650662-1650949:1:exon

position:1650662:1
position: 1650662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650949:1
position: 1650949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1651043-1651187:1:exon

position:1651043:1
position: 1651043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651187:1
position: 1651187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1652541-1652679:1:exon

position:1652541:1
position: 1652541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652679:1
position: 1652679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1652941-1653162:1:exon

position:1652941:1
position: 1652941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653162:1
position: 1653162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1659512-1659692:1:exon

position:1659512:1
position: 1659512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659692:1
position: 1659692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1662975-1663136:1:exon

position:1662975:1
position: 1662975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663136:1
position: 1663136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1665862-1666079:1:exon

position:1665862:1
position: 1665862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666079:1
position: 1666079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1667427-1667581:1:exon

position:1667427:1
position: 1667427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667581:1
position: 1667581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1674210-1674285:1:exon

position:1674210:1
position: 1674210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674285:1
position: 1674285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1674336-1674584:1:exon

position:1674336:1
position: 1674336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674584:1
position: 1674584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1680758-1680896:1:exon

position:1680758:1
position: 1680758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680896:1
position: 1680896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1680996-1681105:1:exon

position:1680996:1
position: 1680996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681105:1
position: 1681105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1681222-1681440:1:exon

position:1681222:1
position: 1681222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681440:1
position: 1681440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1682366-1682559:1:exon

position:1682366:1
position: 1682366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682559:1
position: 1682559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1684503-1684675:1:exon

position:1684503:1
position: 1684503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684675:1
position: 1684675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1685676-1685955:1:exon

position:1685676:1
position: 1685676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685955:1
position: 1685955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1686580-1686852:1:exon

position:1686580:1
position: 1686580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686852:1
position: 1686852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1687602-1687836:1:exon

position:1687602:1
position: 1687602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687836:1
position: 1687836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1687933-1688159:1:exon

position:1687933:1
position: 1687933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688159:1
position: 1688159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1695107-1695263:1:exon

position:1695107:1
position: 1695107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695263:1
position: 1695263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1695601-1695790:1:exon

position:1695601:1
position: 1695601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695790:1
position: 1695790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1698408-1698877:1:exon

position:1698408:1
position: 1698408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698877:1
position: 1698877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1699534-1699674:1:exon

position:1699534:1
position: 1699534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699674:1
position: 1699674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1701027-1701179:1:exon

position:1701027:1
position: 1701027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701179:1
position: 1701179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:1702121-1702300:1:exon

position:1702121:1
position: 1702121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702300:1
position: 1702300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:1704254-1704481:1:exon

position:1704254:1
position: 1704254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704481:1
position: 1704481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:1708156-1708367:1:exon

position:1708156:1
position: 1708156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1708367:1
position: 1708367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:1712242-1712348:1:exon

position:1712242:1
position: 1712242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1712348:1
position: 1712348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:1713197-1713376:1:exon

position:1713197:1
position: 1713197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1713376:1
position: 1713376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:1713753-1713859:1:exon

position:1713753:1
position: 1713753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1713859:1
position: 1713859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:1717524-1719904:1:exon

position:1717524:1
position: 1717524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

smg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: smg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SMG1
translation: MSHRALSARVNKRQRWNDWDSRIDSATADQDSLKYPLARDRGNSASYGLHSTSSASVSRYRHDDIRILAGFQNEEGGRYDVNGGLGENAYGRKSLGQELRVNNVTTDVSSIQHGSRALATKEMRKSQERSLSYSDESRLSNLLRRISREDDRERRLATIKQLKEFIQQPENKVVLIKQLDNALTAIQDVLNESSKLLHELRQEGACCLGLLCVSLSYEAEKIFKWIFSKFNSSTKDEVKLLYLCATYKALETAGEKKAFSSVMQLVMVSLQTVLENVDTPELLCQCVKCILLVARCYPHIFSTNFRDTVDILVGWHIDHTQKQSLTQQVSGWLQCLEQFWVADLGFSTTLLGQFLEDMEAYAEDLSHVASGEAVDEDIPPPSVSLPKLAALLRVFSTVVRSIGERFSPIRGPPITEAYVTDVLLRVVNCVTTAKQVFFSEAVLTAANECVCVLLGSMDSDIAKHCEITITYGLDQLDSCQMFGAEYIISVLNLLTLIVEQINTKLPASFVERLFSPHSKLLQLRFHREKEVVSAAQYVYQAVLSLKNIPVLETAYKLILGEMTCALNSLLQGLTLPLVCSEIQHEAFRDRTFKEENAEFVIIFDLSALTTIGNAKNSLIGMWALSPTVFALLSDNLTIVHANLAVHYPAIQYGVLYTLYSHCTRHDHFISSSLSSSSPSLFDGAVISTVTMATKKHFSIILNLLGMLLSKDILNHDVRKLLLTWALEVSILMKKSETYAPLFAIPSFHKFCKGLLSNAVHEDASICLQACSSLQIVSTSLPNDLLQRCVDVCRVQLVHCGVRVRQAFGKLLKTIPLDVALSNSNHTEVQGISLAISGHMSKAPSNTFHPQDFSDLISFILYGSCHRIGKDHWLERLFHSCQRLDKYDQSSIPRNLLKTEAVLWQWAVWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAAHTLNPDHDISQWTTADNDDGHTSNQLRLILLLQFLENLEKLMYNAYEGCANALTAPPKVIRTFFYTNRQTCHDWLTRIRVAIMRVGLLAGQPAVTVRHGFDLLTEMKNSSVSQGNEMEVTVMMIVEALCELNCPEAIQGMAVWSSAVLAKSLSWINSVAQQAEGRFEKASNEYQEQLCAMTGVDCCIKGLDKSLLKVSIASTGSNLASPKHTGNTESKKTVLTKQSDTSPEIVNYLANKACECYISLSDWPAVEEWQNGILALKKSTNGSSIHLKADFNYIRALGSFECGDFPACQEQLELLPGEDINFINGAAKEKLDMKKLLPNVMSPDPRELQKAIEVQLMRSAVCFSSTIEQTEQEKKLQNSTENTVRYLKQMARVAVGPLRLSTLSMAGSLPMLSTLQLYCSTALENTVTNKLSTEDCLLPLYSEALQSCRQHDVRPWLQALRYTVFQARVAEKLKGSSTSINGHLMELGLTAVKFARKQGNVLLATKLLEQCSKTSLSDANTTQDLVHLFKQMSLHGTVHEKWGPELDIEKSKLLYTAGHSTHAMEMLSSCAIAYCKSSKAESAVAKSILTLTKWIQAEWKEMSVQLKQVFRAQQQKSITGLPTLAKSIHTLAELTPPNLMEEAACPKMVVESTVNIGVGEPDFVLGQLYHLSAVQAPEIAKSWAALASWAYRWGRKVVDNASQGEGVPLLAREKIDVQNLLPENTSEEDTEVIYGILGQAMCRPTGIQDEDLALQINDDEEDDMVEVIWRQLMTNCPWLGDQDESVIEGLIEVWRKVVDRIFNLYKLSCKAYFTFLKLNAGQVHVDGEDPKVMLNNTPTKQSNDDVIVMATLRLLRLLVKHAGELREGLEHGLATTPTAPWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSPHLILYPAIVGSISLSGESQSSGAKLSSAIPTLLSNIQAEALSGGECEENSPPGSQDSIKDEQKTCFNEDQAMMQDCYSTIVDKLSSANPTMVLQVQMLVGELRRITVLWDELWLGVLQQQHMHVLRRIQQLEDEVKRVQNNNTLRKMEFKIDSLSL…
SIO_010081: smg1
subclass of: SO_0000673
so part of: smg1
location: join(1549395..1549459,1585486..1585649,1598776..1598928,1602277..1602413,1602620..1602678,1603884..1604097,1604445..1604570,1604656..1604728,1605410..1605507,1607926..1608099,1608370..1608594,1609234..1609335,1613237..1613506,1615523..1615653,1616431..1616592,1616743..1616861,1616942..1617029,1617143..1617244,1618370..1618510,1618645..1618844,1621210..1621406,1621827..1621991,1623778..1623932,1631919..1632067,1634693..1634894,1642814..1642923,1644431..1644578,1647295..1647454,1647897..1648017,1649410..1649658,1650662..1650949,1651043..1651187,1652541..1652679,1652941..1653162,1659512..1659692,1662975..1663136,1665862..1666079,1667427..1667581,1674210..1674285,1674336..1674584,1680758..1680896,1680996..1681105,1681222..1681440,1682366..1682559,1684503..1684675,1685676..1685955,1686580..1686852,1687602..1687836,1687933..1688159,1695107..1695263,1695601..1695790,1698408..1698877,1699534..1699674,1701027..1701179,1702121..1702300,1704254..1704481,1708156..1708367,1712242..1712348,1713197..1713376,1713753..1713859,1717524..1717601)
location: region:1549395-1717601:1
so has part: feature:1549395-1549459:1:exon
so has part: feature:1585486-1585649:1:exon
so has part: feature:1598776-1598928:1:exon
so has part: feature:1602277-1602413:1:exon
so has part: feature:1602620-1602678:1:exon
so has part: feature:1603884-1604097:1:exon
so has part: feature:1604445-1604570:1:exon
so has part: feature:1604656-1604728:1:exon
so has part: feature:1605410-1605507:1:exon
so has part: feature:1607926-1608099:1:exon
so has part: feature:1608370-1608594:1:exon
so has part: feature:1609234-1609335:1:exon
so has part: feature:1613237-1613506:1:exon
so has part: feature:1615523-1615653:1:exon
so has part: feature:1616431-1616592:1:exon
so has part: feature:1616743-1616861:1:exon
so has part: feature:1616942-1617029:1:exon
so has part: feature:1617143-1617244:1:exon
so has part: feature:1618370-1618510:1:exon
so has part: feature:1618645-1618844:1:exon
so has part: feature:1621210-1621406:1:exon
so has part: feature:1621827-1621991:1:exon
so has part: feature:1623778-1623932:1:exon
so has part: feature:1631919-1632067:1:exon
so has part: feature:1634693-1634894:1:exon
so has part: feature:1642814-1642923:1:exon
so has part: feature:1644431-1644578:1:exon
so has part: feature:1647295-1647454:1:exon
so has part: feature:1647897-1648017:1:exon
so has part: feature:1649410-1649658:1:exon
so has part: feature:1650662-1650949:1:exon
so has part: feature:1651043-1651187:1:exon
so has part: feature:1652541-1652679:1:exon
so has part: feature:1652941-1653162:1:exon
so has part: feature:1659512-1659692:1:exon
so has part: feature:1662975-1663136:1:exon
so has part: feature:1665862-1666079:1:exon
so has part: feature:1667427-1667581:1:exon
so has part: feature:1674210-1674285:1:exon
so has part: feature:1674336-1674584:1:exon
so has part: feature:1680758-1680896:1:exon
so has part: feature:1680996-1681105:1:exon
so has part: feature:1681222-1681440:1:exon
so has part: feature:1682366-1682559:1:exon
so has part: feature:1684503-1684675:1:exon
so has part: feature:1685676-1685955:1:exon
so has part: feature:1686580-1686852:1:exon
so has part: feature:1687602-1687836:1:exon
so has part: feature:1687933-1688159:1:exon
so has part: feature:1695107-1695263:1:exon
so has part: feature:1695601-1695790:1:exon
so has part: feature:1698408-1698877:1:exon
so has part: feature:1699534-1699674:1:exon
so has part: feature:1701027-1701179:1:exon
so has part: feature:1702121-1702300:1:exon
so has part: feature:1704254-1704481:1:exon
so has part: feature:1708156-1708367:1:exon
so has part: feature:1712242-1712348:1:exon
so has part: feature:1713197-1713376:1:exon
so has part: feature:1713753-1713859:1:exon
so has part: feature:1717524-1717601:1:exon

XP_048465617.1
type: Protein
SIO_000068: ncbiprotein

position:1549395:1
position: 1549395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717601:1
position: 1717601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1549395-1549459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1585486-1585649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1598776-1598928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1602277-1602413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1602620-1602678:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1603884-1604097:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1604445-1604570:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1604656-1604728:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1605410-1605507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1607926-1608099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1608370-1608594:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1609234-1609335:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1613237-1613506:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1615523-1615653:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1616431-1616592:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1616743-1616861:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1616942-1617029:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1617143-1617244:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1618370-1618510:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1618645-1618844:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1621210-1621406:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1621827-1621991:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1623778-1623932:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1631919-1632067:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1634693-1634894:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1642814-1642923:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1644431-1644578:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1647295-1647454:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1647897-1648017:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1649410-1649658:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1650662-1650949:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1651043-1651187:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1652541-1652679:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1652941-1653162:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1659512-1659692:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1662975-1663136:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1665862-1666079:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1667427-1667581:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1674210-1674285:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1674336-1674584:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1680758-1680896:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1680996-1681105:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1681222-1681440:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1682366-1682559:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1684503-1684675:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1685676-1685955:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1686580-1686852:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1687602-1687836:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1687933-1688159:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1695107-1695263:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1695601-1695790:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1698408-1698877:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1699534-1699674:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1701027-1701179:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1702121-1702300:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1704254-1704481:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1708156-1708367:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1712242-1712348:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1713197-1713376:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1713753-1713859:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1717524-1717601:1:exon

LOC125485647
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1568137..1568641
location: region:1568137-1568641:1
so has part: feature:1568137-1568641:1:exon

125485647
type: Gene
SIO_000068: ncbigene

position:1568137:1
position: 1568137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568641:1
position: 1568641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1568137-1568641:1:exon

LOC125485647
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125485647
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
pseudo: true
SIO_010081: LOC125485647
subclass of: SO_0000673
so part of: LOC125485647
location: 1568137..1568641
location: region:1568137-1568641:1
so has part: feature:1568137-1568641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1568137-1568641:1:exon

arl6ip1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: arl6ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1739523..1747535
location: region:1739523-1747535:1
so has part: feature:1739523-1747535:1:exon
subclass of: SO_0000010

109934748
type: Gene
SIO_000068: ncbigene

position:1739523:1
position: 1739523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1747535:1
position: 1747535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1739523-1747535:1:exon

arl6ip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: arl6ip1
product: ADP-ribosylation factor-like 6 interacting protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020533418.2
SIO_010081: arl6ip1
subclass of: SO_0000673
so part of: arl6ip1
location: join(1739523..1739675,1742038..1742157,1743160..1743277,1743872..1743956,1745982..1747535)
location: region:1739523-1747535:1
so has part: feature:1739523-1739675:1:exon
so has part: feature:1742038-1742157:1:exon
so has part: feature:1743160-1743277:1:exon
so has part: feature:1743872-1743956:1:exon
so has part: feature:1745982-1747535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1739523-1739675:1:exon

position:1739675:1
position: 1739675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1742038-1742157:1:exon

position:1742038:1
position: 1742038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742157:1
position: 1742157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1743160-1743277:1:exon

position:1743160:1
position: 1743160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1743277:1
position: 1743277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1743872-1743956:1:exon

position:1743872:1
position: 1743872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1743956:1
position: 1743956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1745982-1747535:1:exon

position:1745982:1
position: 1745982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

arl6ip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: arl6ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 6-interacting protein 1
translation: MLAADHVLRWDKPWFPAVMMLVVSVVFLLIYWLDPSVLTGVSCAIMVICLADYLVPTVASRMFGSNKWTTEQQQRFHEICSNLVKTKRWVVGWWRRLFALKEEKPKMYFMTAVSVLSVVAWIGQQVHNLFLTYLIVSFILLFPGLNRHRLITKYVGMARREINKLLKQKEKKNE
SIO_010081: arl6ip1
subclass of: SO_0000673
so part of: arl6ip1
location: join(1739593..1739675,1742038..1742157,1743160..1743277,1743872..1743956,1745982..1746100)
location: region:1739593-1746100:1
so has part: feature:1739593-1739675:1:exon
so has part: feature:1742038-1742157:1:exon
so has part: feature:1743160-1743277:1:exon
so has part: feature:1743872-1743956:1:exon
so has part: feature:1745982-1746100:1:exon

XP_020389007.1
type: Protein
SIO_000068: ncbiprotein

position:1739593:1
position: 1739593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746100:1
position: 1746100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1739593-1739675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1742038-1742157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1743160-1743277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1743872-1743956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1745982-1746100:1:exon

LOC109934750
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109934750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1749556..1777291)
location: region:1749556-1777291:-1
so has part: feature:1749556-1777291:-1:exon
subclass of: SO_0000010

109934750
type: Gene
SIO_000068: ncbigene

position:1749556:-1
position: 1749556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777291:-1
position: 1777291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1749556-1777291:-1:exon

LOC109934750
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109934750
product: uncharacterized LOC109934750, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048609862.1
SIO_010081: LOC109934750
subclass of: SO_0000673
so part of: LOC109934750
location: complement(join(1749556..1752226,1756229..1756433,1758284..1758424,1767532..1767600,1768171..1768421,1776296..1776404,1776745..1776868,1777107..1777291))
location: region:1749556-1777291:-1
so has part: feature:1777107-1777291:-1:exon
so has part: feature:1776745-1776868:-1:exon
so has part: feature:1776296-1776404:-1:exon
so has part: feature:1768171-1768421:-1:exon
so has part: feature:1767532-1767600:-1:exon
so has part: feature:1758284-1758424:-1:exon
so has part: feature:1756229-1756433:-1:exon
so has part: feature:1749556-1752226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1777107-1777291:-1:exon

position:1777107:-1
position: 1777107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1776745-1776868:-1:exon

position:1776745:-1
position: 1776745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776868:-1
position: 1776868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1776296-1776404:-1:exon

position:1776296:-1
position: 1776296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776404:-1
position: 1776404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1768171-1768421:-1:exon

position:1768171:-1
position: 1768171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1768421:-1
position: 1768421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1767532-1767600:-1:exon

position:1767532:-1
position: 1767532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767600:-1
position: 1767600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1758284-1758424:-1:exon

position:1758284:-1
position: 1758284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758424:-1
position: 1758424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1756229-1756433:-1:exon

position:1756229:-1
position: 1756229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756433:-1
position: 1756433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1749556-1752226:-1:exon

position:1752226:-1
position: 1752226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109934750
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109934750
product: uncharacterized LOC109934750, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007264412.1
SIO_010081: LOC109934750
so part of: LOC109934750
location: complement(join(1749556..1752226,1756229..1756433,1758284..1758424,1776745..1777291))
location: region:1749556-1777291:-1
so has part: feature:1776745-1777291:-1:exon
so has part: feature:1758284-1758424:-1:exon
so has part: feature:1756229-1756433:-1:exon
so has part: feature:1749556-1752226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1776745-1777291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1758284-1758424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1756229-1756433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1749556-1752226:-1:exon

LOC109934750
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109934750
product: uncharacterized LOC109934750, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007264411.1
SIO_010081: LOC109934750
so part of: LOC109934750
location: complement(join(1749556..1752226,1756229..1756428,1758284..1758424,1768171..1768421,1776745..1777291))
location: region:1749556-1777291:-1
so has part: feature:1776745-1777291:-1:exon
so has part: feature:1768171-1768421:-1:exon
so has part: feature:1758284-1758424:-1:exon
so has part: feature:1756229-1756428:-1:exon
so has part: feature:1749556-1752226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1776745-1777291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1768171-1768421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1758284-1758424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1756229-1756428:-1:exon

position:1756428:-1
position: 1756428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1749556-1752226:-1:exon

LOC109934750
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109934750
product: uncharacterized LOC109934750, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020533421.2
SIO_010081: LOC109934750
subclass of: SO_0000673
so part of: LOC109934750
location: complement(join(1749556..1752226,1756229..1756433,1758284..1758424,1768171..1768421,1776745..1777291))
location: region:1749556-1777291:-1
so has part: feature:1776745-1777291:-1:exon
so has part: feature:1768171-1768421:-1:exon
so has part: feature:1758284-1758424:-1:exon
so has part: feature:1756229-1756433:-1:exon
so has part: feature:1749556-1752226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1776745-1777291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1768171-1768421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1758284-1758424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1756229-1756433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749556-1752226:-1:exon

LOC109934750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109934750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109934750 isoform X2
translation: MSNHEWTQILTGFGKGCCTDTILTDQAKEMTVLRDRPYRTNVAKEMQPVSHLGARAMHKSTLTLGRKSAVSDYTSSYKQYFISQKAQPIIKYSGYPDEIKHLGVNTDGKEHLTTHREAFFVKEVIPRRILNKTVVENRMKNTQGLAMKEITTATSGRASYCTSYSSVHGIRAHHPTSAHIAELQPKRHTHNIITGEEGPSVQPTNYKRKSGDWLQQCSRQRGCFYDRFFLY
SIO_010081: LOC109934750
subclass of: SO_0000673
so part of: LOC109934750
location: complement(join(1752114..1752226,1756229..1756433,1758284..1758424,1768171..1768407))
location: region:1752114-1768407:-1
so has part: feature:1768171-1768407:-1:exon
so has part: feature:1758284-1758424:-1:exon
so has part: feature:1756229-1756433:-1:exon
so has part: feature:1752114-1752226:-1:exon

XP_020389010.2
type: Protein
SIO_000068: ncbiprotein

position:1752114:-1
position: 1752114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1768407:-1
position: 1768407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1768171-1768407:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1758284-1758424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1756229-1756433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1752114-1752226:-1:exon

LOC109934750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109934750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109934750 isoform X1
translation: MSNHEWTQILTGFGKGCCTDTILTDQAKEMTVLRDRPYRTNVAKEMQPVSHLGARAMHKSTLTLGRKSAVSDYTSSYKQMKRLIIYLTNLWPYFNRTLNIHKYFISQKAQPIIKYSGYPDEIKHLGVNTDGKEHLTTHREAFFVKEVIPRRILNKTVVENRMKNTQGLAMKEITTATSGRASYCTSYSSVHGIRAHHPTSAHIAELQPKRHTHNIITGEEGPSVQPTNYKRKSGDWLQQCSRQRGCFYDRFFLY
SIO_010081: LOC109934750
subclass of: SO_0000673
so part of: LOC109934750
location: complement(join(1752114..1752226,1756229..1756433,1758284..1758424,1767532..1767600,1768171..1768407))
location: region:1752114-1768407:-1
so has part: feature:1768171-1768407:-1:exon
so has part: feature:1767532-1767600:-1:exon
so has part: feature:1758284-1758424:-1:exon
so has part: feature:1756229-1756433:-1:exon
so has part: feature:1752114-1752226:-1:exon

XP_048465819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1768171-1768407:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1767532-1767600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1758284-1758424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1756229-1756433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1752114-1752226:-1:exon

rps15a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: rps15a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1777367..1786018
location: region:1777367-1786018:1
so has part: feature:1777367-1786018:1:exon
subclass of: SO_0000010

109934749
type: Gene
SIO_000068: ncbigene

position:1777367:1
position: 1777367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1786018:1
position: 1786018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777367-1786018:1:exon

rps15a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rps15a
product: ribosomal protein S15a, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020533420.2
SIO_010081: rps15a
subclass of: SO_0000673
so part of: rps15a
location: join(1777367..1777490,1778091..1778228,1779165..1779244,1779624..1779709,1785889..1786018)
location: region:1777367-1786018:1
so has part: feature:1777367-1777490:1:exon
so has part: feature:1778091-1778228:1:exon
so has part: feature:1779165-1779244:1:exon
so has part: feature:1779624-1779709:1:exon
so has part: feature:1785889-1786018:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1777367-1777490:1:exon

position:1777490:1
position: 1777490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1778091-1778228:1:exon

position:1778091:1
position: 1778091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778228:1
position: 1778228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1779165-1779244:1:exon

position:1779165:1
position: 1779165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779244:1
position: 1779244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1779624-1779709:1:exon

position:1779624:1
position: 1779624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779709:1
position: 1779709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1785889-1786018:1:exon

position:1785889:1
position: 1785889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rps15a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rps15a
product: ribosomal protein S15a, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020533419.2
SIO_010081: rps15a
subclass of: SO_0000673
so part of: rps15a
location: join(1777453..1777581,1778091..1778228,1779165..1779244,1779624..1779709,1785889..1786018)
location: region:1777453-1786018:1
so has part: feature:1777453-1777581:1:exon
so has part: feature:1778091-1778228:1:exon
so has part: feature:1779165-1779244:1:exon
so has part: feature:1779624-1779709:1:exon
so has part: feature:1785889-1786018:1:exon

position:1777453:1
position: 1777453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777453-1777581:1:exon

position:1777581:1
position: 1777581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1778091-1778228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1779165-1779244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1779624-1779709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1785889-1786018:1:exon

rps15a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rps15a
product: ribosomal protein S15a, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609863.1
SIO_010081: rps15a
subclass of: SO_0000673
so part of: rps15a
location: join(1777469..1777628,1778091..1778228,1779165..1779244,1779624..1779709,1785889..1786018)
location: region:1777469-1786018:1
so has part: feature:1777469-1777628:1:exon
so has part: feature:1778091-1778228:1:exon
so has part: feature:1779165-1779244:1:exon
so has part: feature:1779624-1779709:1:exon
so has part: feature:1785889-1786018:1:exon

position:1777469:1
position: 1777469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777469-1777628:1:exon

position:1777628:1
position: 1777628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1778091-1778228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1779165-1779244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1779624-1779709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1785889-1786018:1:exon

rps15a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rps15a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S15a isoform X1
translation: MRGFIRCDYGRAKRIMVRMNVLADALTSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRGGKIVVNLTGRLNKCGVISPRFDVQVKELERWQNGLLPSRQFGYLVLTTSAGIMDHEEAKRKHTGGKILGFFF
SIO_010081: rps15a
subclass of: SO_0000673
so part of: rps15a
location: join(1777589..1777628,1778091..1778228,1779165..1779244,1779624..1779709,1785889..1785982)
location: region:1777589-1785982:1
so has part: feature:1777589-1777628:1:exon
so has part: feature:1778091-1778228:1:exon
so has part: feature:1779165-1779244:1:exon
so has part: feature:1779624-1779709:1:exon
so has part: feature:1785889-1785982:1:exon

XP_048465820.1
type: Protein
SIO_000068: ncbiprotein

position:1777589:1
position: 1777589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785982:1
position: 1785982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777589-1777628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1778091-1778228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1779165-1779244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1779624-1779709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1785889-1785982:1:exon

rps15a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rps15a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S15a isoform X2
translation: MVRMNVLADALTSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRGGKIVVNLTGRLNKCGVISPRFDVQVKELERWQNGLLPSRQFGYLVLTTSAGIMDHEEAKRKHTGGKILGFFF
SIO_010081: rps15a
subclass of: SO_0000673
so part of: rps15a
location: join(1778096..1778228,1779165..1779244,1779624..1779709,1785889..1785982)
location: region:1778096-1785982:1
so has part: feature:1778096-1778228:1:exon
so has part: feature:1779165-1779244:1:exon
so has part: feature:1779624-1779709:1:exon
so has part: feature:1785889-1785982:1:exon

XP_020389008.1
type: Protein
SIO_000068: ncbiprotein

position:1778096:1
position: 1778096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1778096-1778228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1779165-1779244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1779624-1779709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1785889-1785982:1:exon

rps15a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rps15a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S15a isoform X2
translation: MVRMNVLADALTSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRGGKIVVNLTGRLNKCGVISPRFDVQVKELERWQNGLLPSRQFGYLVLTTSAGIMDHEEAKRKHTGGKILGFFF
SIO_010081: rps15a
subclass of: SO_0000673
so part of: rps15a
location: join(1778096..1778228,1779165..1779244,1779624..1779709,1785889..1785982)
location: region:1778096-1785982:1
so has part: feature:1778096-1778228:1:exon
so has part: feature:1779165-1779244:1:exon
so has part: feature:1779624-1779709:1:exon
so has part: feature:1785889-1785982:1:exon

XP_020389009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1778096-1778228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1779165-1779244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1779624-1779709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1785889-1785982:1:exon

xylt1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: xylt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2254194..2482280)
location: region:2254194-2482280:-1
so has part: feature:2254194-2482280:-1:exon
subclass of: SO_0000010

109922602
type: Gene
SIO_000068: ncbigene

position:2254194:-1
position: 2254194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2482280:-1
position: 2482280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2254194-2482280:-1:exon

xylt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: xylt1
product: xylosyltransferase I
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609661.1
SIO_010081: xylt1
subclass of: SO_0000673
so part of: xylt1
location: complement(join(2254194..2258155,2263364..2263697,2266453..2266648,2276777..2277039,2279644..2279820,2309361..2309436,2311650..2311730,2331131..2331333,2332763..2332935,2376133..2376640,2482227..2482280))
location: region:2254194-2482280:-1
so has part: feature:2482227-2482280:-1:exon
so has part: feature:2376133-2376640:-1:exon
so has part: feature:2332763-2332935:-1:exon
so has part: feature:2331131-2331333:-1:exon
so has part: feature:2311650-2311730:-1:exon
so has part: feature:2309361-2309436:-1:exon
so has part: feature:2279644-2279820:-1:exon
so has part: feature:2276777-2277039:-1:exon
so has part: feature:2266453-2266648:-1:exon
so has part: feature:2263364-2263697:-1:exon
so has part: feature:2254194-2258155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2482227-2482280:-1:exon

position:2482227:-1
position: 2482227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2376133-2376640:-1:exon

position:2376133:-1
position: 2376133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2376640:-1
position: 2376640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2332763-2332935:-1:exon

position:2332763:-1
position: 2332763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2332935:-1
position: 2332935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2331131-2331333:-1:exon

position:2331131:-1
position: 2331131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2331333:-1
position: 2331333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2311650-2311730:-1:exon

position:2311650:-1
position: 2311650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2311730:-1
position: 2311730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2309361-2309436:-1:exon

position:2309361:-1
position: 2309361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2309436:-1
position: 2309436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2279644-2279820:-1:exon

position:2279644:-1
position: 2279644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2279820:-1
position: 2279820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2276777-2277039:-1:exon

position:2276777:-1
position: 2276777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2277039:-1
position: 2277039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2266453-2266648:-1:exon

position:2266453:-1
position: 2266453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2266648:-1
position: 2266648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2263364-2263697:-1:exon

position:2263364:-1
position: 2263364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2263697:-1
position: 2263697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2254194-2258155:-1:exon

position:2258155:-1
position: 2258155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

xylt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: xylt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: xylosyltransferase 1
translation: MRNSPGLFLPVLCNVAAPGVLLSHKPKEKNRIDSNNENSVPKDFENIDNSNFGPRMQKQKLQPEAKSKAPIEKKAKYEQMGKAKDHSLLGKSTNEVLKYGSFQAKNASNLQPNYKTRNVYKGVVIGKGTQEIHYDQTPRCEISGKEALSALSRAKSKHCRHEIAELYCLHKDGKLMPEKVPRLCPLEGKAANTIQPDDDSLESLPQNPVRIAFVLVVHGRASRQLRRMFKAIYHRDHYYYIHVDKRSNYLHRDVLEFASQYPNVRVTPWRMATIWGGASLLTMYLQSMRDLLEMKDWPWDFFINLSAADYPIRTNDQLVSFLSRYKDMNFLKSHGRDNASLLSANSDVDRTGFLLSTPPTASYQTSFFHTVLENSHLCETMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFEAAVNQEIIGQLDFYLFGNYPAGTTALKAYWENVYDEPDGIHSISDTYLTMYHSFARLGLKRAESSWHSKEENKCRYYAMGNPVSVHLYFYTDRFQGYLLKHHATNLATSKLETLETWVMPRKMFKVLNPTNDFARLQFAEIGTEWDAKERIFRNYGGLIGPMDEPIGMQKWGKGPNATVTVVWIDPINVIAATYDIQIESSAEFTHYKPPLKLPLRPGLWTVKILHHWTPVAETKFLVTPLMFSNRQPIGKGETLKLHSGPSKNAYMEQSFQGLRNTLNIHTTPNQVEQAKHNAALTGSQLEGWVDPMVNSLWSAVDICASGPTSCPIMQTCSQTTWSSESPDPKSELGPVKANGRLR
SIO_010081: xylt1
subclass of: SO_0000673
so part of: xylt1
location: complement(join(2257833..2258155,2263364..2263697,2266453..2266648,2276777..2277039,2279644..2279820,2309361..2309436,2311650..2311730,2331131..2331333,2332763..2332935,2376133..2376640,2482227..2482280))
location: region:2257833-2482280:-1
so has part: feature:2482227-2482280:-1:exon
so has part: feature:2376133-2376640:-1:exon
so has part: feature:2332763-2332935:-1:exon
so has part: feature:2331131-2331333:-1:exon
so has part: feature:2311650-2311730:-1:exon
so has part: feature:2309361-2309436:-1:exon
so has part: feature:2279644-2279820:-1:exon
so has part: feature:2276777-2277039:-1:exon
so has part: feature:2266453-2266648:-1:exon
so has part: feature:2263364-2263697:-1:exon
so has part: feature:2257833-2258155:-1:exon

XP_048465618.1
type: Protein
SIO_000068: ncbiprotein

position:2257833:-1
position: 2257833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2482227-2482280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2376133-2376640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2332763-2332935:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2331131-2331333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2311650-2311730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2309361-2309436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2279644-2279820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2276777-2277039:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2266453-2266648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2263364-2263697:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2257833-2258155:-1:exon

nomo
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: nomo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3355632..3423307)
location: region:3355632-3423307:-1
so has part: feature:3355632-3423307:-1:exon
subclass of: SO_0000010

109921951
type: Gene
SIO_000068: ncbigene

position:3355632:-1
position: 3355632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3423307:-1
position: 3423307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355632-3423307:-1:exon

nomo
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nomo
product: nodal modulator
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609388.1
SIO_010081: nomo
subclass of: SO_0000673
so part of: nomo
location: complement(join(3355632..3357539,3362525..3362617,3368688..3368807,3368939..3369040,3370864..3370974,3373489..3373572,3376054..3376195,3377879..3378006,3378630..3378743,3380140..3380266,3382291..3382447,3385948..3386030,3388613..3388822,3392735..3392830,3392927..3392990,3395074..3395161,3397904..3398040,3398145..3398276,3401189..3401330,3402280..3402457,3402589..3402739,3406956..3407061,3408505..3408594,3413825..3413962,3414738..3414890,3416207..3416279,3416372..3416475,3417732..3417832,3420495..3420540,3421387..3421476,3423038..3423307))
location: region:3355632-3423307:-1
so has part: feature:3423038-3423307:-1:exon
so has part: feature:3421387-3421476:-1:exon
so has part: feature:3420495-3420540:-1:exon
so has part: feature:3417732-3417832:-1:exon
so has part: feature:3416372-3416475:-1:exon
so has part: feature:3416207-3416279:-1:exon
so has part: feature:3414738-3414890:-1:exon
so has part: feature:3413825-3413962:-1:exon
so has part: feature:3408505-3408594:-1:exon
so has part: feature:3406956-3407061:-1:exon
so has part: feature:3402589-3402739:-1:exon
so has part: feature:3402280-3402457:-1:exon
so has part: feature:3401189-3401330:-1:exon
so has part: feature:3398145-3398276:-1:exon
so has part: feature:3397904-3398040:-1:exon
so has part: feature:3395074-3395161:-1:exon
so has part: feature:3392927-3392990:-1:exon
so has part: feature:3392735-3392830:-1:exon
so has part: feature:3388613-3388822:-1:exon
so has part: feature:3385948-3386030:-1:exon
so has part: feature:3382291-3382447:-1:exon
so has part: feature:3380140-3380266:-1:exon
so has part: feature:3378630-3378743:-1:exon
so has part: feature:3377879-3378006:-1:exon
so has part: feature:3376054-3376195:-1:exon
so has part: feature:3373489-3373572:-1:exon
so has part: feature:3370864-3370974:-1:exon
so has part: feature:3368939-3369040:-1:exon
so has part: feature:3368688-3368807:-1:exon
so has part: feature:3362525-3362617:-1:exon
so has part: feature:3355632-3357539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3423038-3423307:-1:exon

position:3423038:-1
position: 3423038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3421387-3421476:-1:exon

position:3421387:-1
position: 3421387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3421476:-1
position: 3421476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3420495-3420540:-1:exon

position:3420495:-1
position: 3420495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3420540:-1
position: 3420540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3417732-3417832:-1:exon

position:3417732:-1
position: 3417732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3417832:-1
position: 3417832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3416372-3416475:-1:exon

position:3416372:-1
position: 3416372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3416475:-1
position: 3416475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3416207-3416279:-1:exon

position:3416207:-1
position: 3416207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3416279:-1
position: 3416279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3414738-3414890:-1:exon

position:3414738:-1
position: 3414738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3414890:-1
position: 3414890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3413825-3413962:-1:exon

position:3413825:-1
position: 3413825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3413962:-1
position: 3413962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3408505-3408594:-1:exon

position:3408505:-1
position: 3408505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3408594:-1
position: 3408594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3406956-3407061:-1:exon

position:3406956:-1
position: 3406956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3407061:-1
position: 3407061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3402589-3402739:-1:exon

position:3402589:-1
position: 3402589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3402739:-1
position: 3402739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3402280-3402457:-1:exon

position:3402280:-1
position: 3402280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3402457:-1
position: 3402457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3401189-3401330:-1:exon

position:3401189:-1
position: 3401189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3401330:-1
position: 3401330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3398145-3398276:-1:exon

position:3398145:-1
position: 3398145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3398276:-1
position: 3398276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3397904-3398040:-1:exon

position:3397904:-1
position: 3397904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3398040:-1
position: 3398040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3395074-3395161:-1:exon

position:3395074:-1
position: 3395074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3395161:-1
position: 3395161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3392927-3392990:-1:exon

position:3392927:-1
position: 3392927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3392990:-1
position: 3392990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3392735-3392830:-1:exon

position:3392735:-1
position: 3392735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3392830:-1
position: 3392830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3388613-3388822:-1:exon

position:3388613:-1
position: 3388613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3388822:-1
position: 3388822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3385948-3386030:-1:exon

position:3385948:-1
position: 3385948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3386030:-1
position: 3386030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3382291-3382447:-1:exon

position:3382291:-1
position: 3382291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3382447:-1
position: 3382447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3380140-3380266:-1:exon

position:3380140:-1
position: 3380140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380266:-1
position: 3380266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3378630-3378743:-1:exon

position:3378630:-1
position: 3378630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3378743:-1
position: 3378743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3377879-3378006:-1:exon

position:3377879:-1
position: 3377879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3378006:-1
position: 3378006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3376054-3376195:-1:exon

position:3376054:-1
position: 3376054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3376195:-1
position: 3376195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3373489-3373572:-1:exon

position:3373489:-1
position: 3373489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3373572:-1
position: 3373572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3370864-3370974:-1:exon

position:3370864:-1
position: 3370864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370974:-1
position: 3370974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3368939-3369040:-1:exon

position:3368939:-1
position: 3368939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3369040:-1
position: 3369040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3368688-3368807:-1:exon

position:3368688:-1
position: 3368688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368807:-1
position: 3368807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3362525-3362617:-1:exon

position:3362525:-1
position: 3362525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3362617:-1
position: 3362617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3355632-3357539:-1:exon

position:3357539:-1
position: 3357539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nomo
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nomo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nodal modulator 1
translation: MFLRPAESACVLASVCRRPAVSACALGRAVMAGVRPWPVFQLLALTGLGFSLSLGLGLAARADDIVVGCGGFVKSDVEINYSLIEIKLYTKQGTLKYQTDCAPNNGYFMIPLYDKGDFVLKIEPPLGWSFEPTNVDLHVDGINDICTKGEDINFVFTGFSVSGKVLSKGQTSGPAGVHVTLRKVGTVVDQTSLTQTGGKYVFTKVLPGDYEIFASHPTWTLQKASTSVQVLNSNANAFDSLVVAGYEVVGSVRSDGEPMKGVVFLLFSSSVARQDTFGCNFSPVEGFQTADEASPFLCSVVSGEDGSFIFPSLPSGEYIVVPFYRGERITFDVAPSRLDFSVAHNSLRIEPVFRVMGFSVTGRVLDGPNGQGVRYATVILSNQIKVTTKADGSFRLENMTTGTYSINTQKEHIFFEPVTVKIAPNTPQLADIVAISFSVCGQVAVKRFPEGLKPPIKYKLAMVTQSKDKASPVITETDSHGSFCFQAKAGTYIIQVMVSETEAKAGLALKPKVQTVTVTNAPIMDLSFTQFMASVTGKVHCLDSCNDLAVTLQPLSRHSDKQSMQLSGGADSASFTFNNILPGKYKVNIIHEEWCWKNRSFELEVVDQDLTGIEFRQTGYMLRCSLSHAITLEFYQDGSGPENVGVYNLTKGVNRFCLSKPGAYKVTPRSCHQFEHEHYIYDTAAPTILTLTAIRHRALGTIVTDKLMDVTVTIRSSIDSEPALVLGPLKSVQEQRQEQQLAEIEARRLERKKKGQKEGEREPPAQEIVEELEGPFLYEFSYWARAGEKITVTPSSKELLFYPPSVEAVITGDSCPGRLIEIQGKVGLFLEGRIHPALEGVEIIITEKTSTPLITVFTNEEGSYRVGPLHRDQEYSVTAQKEGFVLTALKGTVGDFKAFALAGVTFEIKTEDDQPLAGVLLSLSGGQFRSNLLTQENGMLSFANLSPGQYYFKPMMKEFRFEPASQMIEIQEGQTLKIKITGYRTAYSCYGTVSSLNGEPEQGVAVEAVGQNDCSIYGEDTVTDEDGKFRLRGLLPSCVYHIQLKVEGNDHIERALPRYRAVEVDSSDIDGVNILAFRQINQFDLSGNVITSPEHLSTLRVVLYKSENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVALESTLPKSLYEYILPQISFSATGYHKHITLMFTPSRKLPEQDVAQGSYIALPLTLLLLLAGYNHDKLFPLLTQLINRLQGVRALSQGGLDGASQEEAKRQAKRLKSRRT
SIO_010081: nomo
subclass of: SO_0000673
so part of: nomo
location: complement(join(3357408..3357539,3362525..3362617,3368688..3368807,3368939..3369040,3370864..3370974,3373489..3373572,3376054..3376195,3377879..3378006,3378630..3378743,3380140..3380266,3382291..3382447,3385948..3386030,3388613..3388822,3392735..3392830,3392927..3392990,3395074..3395161,3397904..3398040,3398145..3398276,3401189..3401330,3402280..3402457,3402589..3402739,3406956..3407061,3408505..3408594,3413825..3413962,3414738..3414890,3416207..3416279,3416372..3416475,3417732..3417832,3420495..3420540,3421387..3421476,3423038..3423292))
location: region:3357408-3423292:-1
so has part: feature:3423038-3423292:-1:exon
so has part: feature:3421387-3421476:-1:exon
so has part: feature:3420495-3420540:-1:exon
so has part: feature:3417732-3417832:-1:exon
so has part: feature:3416372-3416475:-1:exon
so has part: feature:3416207-3416279:-1:exon
so has part: feature:3414738-3414890:-1:exon
so has part: feature:3413825-3413962:-1:exon
so has part: feature:3408505-3408594:-1:exon
so has part: feature:3406956-3407061:-1:exon
so has part: feature:3402589-3402739:-1:exon
so has part: feature:3402280-3402457:-1:exon
so has part: feature:3401189-3401330:-1:exon
so has part: feature:3398145-3398276:-1:exon
so has part: feature:3397904-3398040:-1:exon
so has part: feature:3395074-3395161:-1:exon
so has part: feature:3392927-3392990:-1:exon
so has part: feature:3392735-3392830:-1:exon
so has part: feature:3388613-3388822:-1:exon
so has part: feature:3385948-3386030:-1:exon
so has part: feature:3382291-3382447:-1:exon
so has part: feature:3380140-3380266:-1:exon
so has part: feature:3378630-3378743:-1:exon
so has part: feature:3377879-3378006:-1:exon
so has part: feature:3376054-3376195:-1:exon
so has part: feature:3373489-3373572:-1:exon
so has part: feature:3370864-3370974:-1:exon
so has part: feature:3368939-3369040:-1:exon
so has part: feature:3368688-3368807:-1:exon
so has part: feature:3362525-3362617:-1:exon
so has part: feature:3357408-3357539:-1:exon

XP_048465345.1
type: Protein
SIO_000068: ncbiprotein

position:3357408:-1
position: 3357408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3423292:-1
position: 3423292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3423038-3423292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3421387-3421476:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3420495-3420540:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3417732-3417832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3416372-3416475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3416207-3416279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3414738-3414890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3413825-3413962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3408505-3408594:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3406956-3407061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3402589-3402739:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3402280-3402457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3401189-3401330:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3398145-3398276:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3397904-3398040:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3395074-3395161:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3392927-3392990:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3392735-3392830:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3388613-3388822:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3385948-3386030:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3382291-3382447:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3380140-3380266:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3378630-3378743:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3377879-3378006:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3376054-3376195:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3373489-3373572:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3370864-3370974:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3368939-3369040:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3368688-3368807:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3362525-3362617:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3357408-3357539:-1:exon

abcc1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: abcc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3425944..3513803)
location: region:3425944-3513803:-1
so has part: feature:3425944-3513803:-1:exon
subclass of: SO_0000010

109921952
type: Gene
SIO_000068: ncbigene

position:3425944:-1
position: 3425944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3513803:-1
position: 3513803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3425944-3513803:-1:exon

abcc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: abcc1
product: ATP-binding cassette, sub-family C (CFTR/MRP), member 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609662.1
SIO_010081: abcc1
subclass of: SO_0000673
so part of: abcc1
location: complement(join(3425944..3426431,3431371..3431565,3433262..3433428,3433544..3433702,3434484..3434630,3437274..3437375,3438870..3438996,3439273..3439472,3445527..3445837,3456877..3457042,3457139..3457306,3459320..3459496,3463034..3463160,3464513..3464582,3466516..3466603,3467707..3467853,3471972..3472175,3473650..3473742,3478295..3478456,3479170..3479347,3483697..3483921,3484050..3484181,3485780..3485841,3490333..3490458,3496700..3496837,3508499..3508624,3510405..3510594,3513766..3513803))
location: region:3425944-3513803:-1
so has part: feature:3513766-3513803:-1:exon
so has part: feature:3510405-3510594:-1:exon
so has part: feature:3508499-3508624:-1:exon
so has part: feature:3496700-3496837:-1:exon
so has part: feature:3490333-3490458:-1:exon
so has part: feature:3485780-3485841:-1:exon
so has part: feature:3484050-3484181:-1:exon
so has part: feature:3483697-3483921:-1:exon
so has part: feature:3479170-3479347:-1:exon
so has part: feature:3478295-3478456:-1:exon
so has part: feature:3473650-3473742:-1:exon
so has part: feature:3471972-3472175:-1:exon
so has part: feature:3467707-3467853:-1:exon
so has part: feature:3466516-3466603:-1:exon
so has part: feature:3464513-3464582:-1:exon
so has part: feature:3463034-3463160:-1:exon
so has part: feature:3459320-3459496:-1:exon
so has part: feature:3457139-3457306:-1:exon
so has part: feature:3456877-3457042:-1:exon
so has part: feature:3445527-3445837:-1:exon
so has part: feature:3439273-3439472:-1:exon
so has part: feature:3438870-3438996:-1:exon
so has part: feature:3437274-3437375:-1:exon
so has part: feature:3434484-3434630:-1:exon
so has part: feature:3433544-3433702:-1:exon
so has part: feature:3433262-3433428:-1:exon
so has part: feature:3431371-3431565:-1:exon
so has part: feature:3425944-3426431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3513766-3513803:-1:exon

position:3513766:-1
position: 3513766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3510405-3510594:-1:exon

position:3510405:-1
position: 3510405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3510594:-1
position: 3510594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3508499-3508624:-1:exon

position:3508499:-1
position: 3508499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3508624:-1
position: 3508624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3496700-3496837:-1:exon

position:3496700:-1
position: 3496700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3496837:-1
position: 3496837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3490333-3490458:-1:exon

position:3490333:-1
position: 3490333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3490458:-1
position: 3490458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3485780-3485841:-1:exon

position:3485780:-1
position: 3485780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3485841:-1
position: 3485841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3484050-3484181:-1:exon

position:3484050:-1
position: 3484050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3484181:-1
position: 3484181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3483697-3483921:-1:exon

position:3483697:-1
position: 3483697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3483921:-1
position: 3483921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3479170-3479347:-1:exon

position:3479170:-1
position: 3479170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3479347:-1
position: 3479347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3478295-3478456:-1:exon

position:3478295:-1
position: 3478295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3478456:-1
position: 3478456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3473650-3473742:-1:exon

position:3473650:-1
position: 3473650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473742:-1
position: 3473742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3471972-3472175:-1:exon

position:3471972:-1
position: 3471972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3472175:-1
position: 3472175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3467707-3467853:-1:exon

position:3467707:-1
position: 3467707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3467853:-1
position: 3467853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3466516-3466603:-1:exon

position:3466516:-1
position: 3466516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3466603:-1
position: 3466603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3464513-3464582:-1:exon

position:3464513:-1
position: 3464513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3464582:-1
position: 3464582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3463034-3463160:-1:exon

position:3463034:-1
position: 3463034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3463160:-1
position: 3463160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3459320-3459496:-1:exon

position:3459320:-1
position: 3459320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3459496:-1
position: 3459496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3457139-3457306:-1:exon

position:3457139:-1
position: 3457139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3457306:-1
position: 3457306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3456877-3457042:-1:exon

position:3456877:-1
position: 3456877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3457042:-1
position: 3457042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3445527-3445837:-1:exon

position:3445527:-1
position: 3445527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3445837:-1
position: 3445837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3439273-3439472:-1:exon

position:3439273:-1
position: 3439273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3439472:-1
position: 3439472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3438870-3438996:-1:exon

position:3438870:-1
position: 3438870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3438996:-1
position: 3438996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3437274-3437375:-1:exon

position:3437274:-1
position: 3437274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3437375:-1
position: 3437375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3434484-3434630:-1:exon

position:3434484:-1
position: 3434484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3434630:-1
position: 3434630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3433544-3433702:-1:exon

position:3433544:-1
position: 3433544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3433702:-1
position: 3433702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3433262-3433428:-1:exon

position:3433262:-1
position: 3433262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3433428:-1
position: 3433428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3431371-3431565:-1:exon

position:3431371:-1
position: 3431371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3431565:-1
position: 3431565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3425944-3426431:-1:exon

position:3426431:-1
position: 3426431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

abcc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: abcc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multidrug resistance-associated protein 1
translation: MDVAVETEDNLECCVLQDLNKTWYTDNPDFTHCFQITILVWIPCIYIWICFPFYFLFLRYHDRGYIRMSLLNKIKTALGFVLWIICWTDLFYAFWERSQGFGRAPVFIVSPAILGVTMLVAVFLIQYERLKGVQSSAILLIFWLLALLCAIPPLRSKIMQSIDQDPNIDVFRNATFYIYLVGVFVQFILSCLTDQPPLFSEPDKDTSLCPELSASFLSKITFWWFTGMTILGYKRPLEPNDLWSLKKNDKSKVIVPHLVEEWGKECFMKTRQSEMIYSPQKNRTKKEPMGSEEPGETQVLILKKKKNLQPSLLKALCRTFGPYFMISFLYKIIHDLLMFASPEILKLLLQFINNDKAPGWQGYFYVVLLFLCAFIQTLFLHQYFQICFVTGMRLKTAIIGAVYRKALVISNAARKTSTVGEIVNLMSVDAQKLMDLITYLNMIWSAPLQVILAMYFLWQNLGPSVLAGVAVMILLVPVNGVIAMKTKNFQVTQMKEKDNRIKLMNEILNGIRVLKLYAWELAFKEKVLQIRQKELKVLKSAAYLSAVSTFTWVCAPFLVALSTFAVYVTVDEKNVLDAQKAFVSLALFNILRFPLNMLPMVISSLVQANVSLKRLGTFLSHEELDLDTVDKHSVHTSWNSIIVNDGTFRWSNEDPPCLNNIDVEIPEGSLVAIVGHVGCGKSSLLSALLGEMQKQEGYVAVKGSVAYVPQQAWIQNASLRANIIFGQELMEEWYRKVVESCALLPDLENLPAGDETEIGEKGVNLSGGQKQRVSLARAVYSRNSVYFLDDPLSAVDAHVGRHIFDKVIGPNGLLSGKTRVLVTHGVNFLPQMDRILVMVDGKISESGTYKELLKQNGAFAEFLRTYAPRENEGVFVLLSSLMMSVGGISASRWLHVRLLYDTLMSPMSFFERTPSGNLVNRFSKDIDTIDSMIPVVIKMFLGSLFNVLVSCTVILIATPIATVIIPPLGFLYIFIQRYYVATSRQLKRLESASRSPIFSNFSETLLGVSVIRAFGEQERFIHQNDARVDENQKAYYPSIVANRWLAVRLEFVGNCIVLFAALFAVVYRDTVSPGIVGLSVSYALQVTSTLNWMVRMTSELETNIVAVERVQEYTGTPKEAHWINRSNRPPQTWPLEGKIEFVNYGLRYREDLDLALKDITVSINGGEKVGIVGRTGAGKSSFALGLFRIIEAAEGQIYIDGIDIAKIGLHDLRFQITIIPQDPVLFAGSLRMNLDPFDQYPDADLWTALELAHLKTFVSGLPDTLNHECSEGGDNLSVGQRQLLCLARALLRKSKILVLDEATAAVDLETDELIQSTIRNQFADCTVLTIAHRLKTIMDYTRIMVLDKGQIVEFDAIPALLHRKGAFYKMAKDSGLL
SIO_010081: abcc1
subclass of: SO_0000673
so part of: abcc1
location: complement(join(3426323..3426431,3431371..3431565,3433262..3433428,3433544..3433702,3434484..3434630,3437274..3437375,3438870..3438996,3439273..3439472,3445527..3445837,3456877..3457042,3457139..3457306,3459320..3459496,3463034..3463160,3464513..3464582,3466516..3466603,3467707..3467853,3471972..3472175,3473650..3473742,3478295..3478456,3479170..3479347,3483697..3483921,3484050..3484181,3485780..3485841,3490333..3490458,3496700..3496837,3508499..3508624,3510405..3510594,3513766..3513803))
location: region:3426323-3513803:-1
so has part: feature:3513766-3513803:-1:exon
so has part: feature:3510405-3510594:-1:exon
so has part: feature:3508499-3508624:-1:exon
so has part: feature:3496700-3496837:-1:exon
so has part: feature:3490333-3490458:-1:exon
so has part: feature:3485780-3485841:-1:exon
so has part: feature:3484050-3484181:-1:exon
so has part: feature:3483697-3483921:-1:exon
so has part: feature:3479170-3479347:-1:exon
so has part: feature:3478295-3478456:-1:exon
so has part: feature:3473650-3473742:-1:exon
so has part: feature:3471972-3472175:-1:exon
so has part: feature:3467707-3467853:-1:exon
so has part: feature:3466516-3466603:-1:exon
so has part: feature:3464513-3464582:-1:exon
so has part: feature:3463034-3463160:-1:exon
so has part: feature:3459320-3459496:-1:exon
so has part: feature:3457139-3457306:-1:exon
so has part: feature:3456877-3457042:-1:exon
so has part: feature:3445527-3445837:-1:exon
so has part: feature:3439273-3439472:-1:exon
so has part: feature:3438870-3438996:-1:exon
so has part: feature:3437274-3437375:-1:exon
so has part: feature:3434484-3434630:-1:exon
so has part: feature:3433544-3433702:-1:exon
so has part: feature:3433262-3433428:-1:exon
so has part: feature:3431371-3431565:-1:exon
so has part: feature:3426323-3426431:-1:exon

XP_048465619.1
type: Protein
SIO_000068: ncbiprotein

position:3426323:-1
position: 3426323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3513766-3513803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3510405-3510594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3508499-3508624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3496700-3496837:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3490333-3490458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3485780-3485841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3484050-3484181:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3483697-3483921:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3479170-3479347:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3478295-3478456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3473650-3473742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3471972-3472175:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3467707-3467853:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3466516-3466603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3464513-3464582:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3463034-3463160:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3459320-3459496:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3457139-3457306:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3456877-3457042:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3445527-3445837:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3439273-3439472:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3438870-3438996:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3437274-3437375:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3434484-3434630:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3433544-3433702:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3433262-3433428:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3431371-3431565:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3426323-3426431:-1:exon

cep20
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cep20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3551718..3569739
location: region:3551718-3569739:1
so has part: feature:3551718-3569739:1:exon
subclass of: SO_0000010

109932159
type: Gene
SIO_000068: ncbigene

position:3551718:1
position: 3551718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3569739:1
position: 3569739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3551718-3569739:1:exon

cep20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cep20
product: centrosomal protein 20
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020531399.2
SIO_010081: cep20
subclass of: SO_0000673
so part of: cep20
location: join(3551718..3551796,3554989..3555186,3567633..3567717,3568437..3568573,3568939..3569739)
location: region:3551718-3569739:1
so has part: feature:3551718-3551796:1:exon
so has part: feature:3554989-3555186:1:exon
so has part: feature:3567633-3567717:1:exon
so has part: feature:3568437-3568573:1:exon
so has part: feature:3568939-3569739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3551718-3551796:1:exon

position:3551796:1
position: 3551796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3554989-3555186:1:exon

position:3554989:1
position: 3554989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3555186:1
position: 3555186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3567633-3567717:1:exon

position:3567633:1
position: 3567633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3567717:1
position: 3567717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3568437-3568573:1:exon

position:3568437:1
position: 3568437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3568573:1
position: 3568573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3568939-3569739:1:exon

position:3568939:1
position: 3568939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cep20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cep20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lisH domain-containing protein FOPNL
translation: MVPNQWATSEEQLDPTQSKYILMKRKVLKETLEKRGVLGQLKARIRAEVFSALDDQSEPRPPLSHENLLINELIREYLEFNKYKYTASVLTAEAGQPEIPLDRQFLVNELNVIEDSSTKTVPLLYGILAHFVNESKEDGVKALIKGASMPNIKKMSLKQPNEKRSLDDLPEPGRSGGRNFEDHFVLRGGH
SIO_010081: cep20
subclass of: SO_0000673
so part of: cep20
location: join(3551718..3551796,3554989..3555186,3567633..3567717,3568437..3568573,3568939..3569012)
location: region:3551718-3569012:1
so has part: feature:3551718-3551796:1:exon
so has part: feature:3554989-3555186:1:exon
so has part: feature:3567633-3567717:1:exon
so has part: feature:3568437-3568573:1:exon
so has part: feature:3568939-3569012:1:exon

XP_020386988.2
type: Protein
SIO_000068: ncbiprotein

position:3569012:1
position: 3569012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3551718-3551796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3554989-3555186:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3567633-3567717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3568437-3568573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3568939-3569012:1:exon

LOC109916081
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109916081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3602691..3742343
location: region:3602691-3742343:1
so has part: feature:3602691-3742343:1:exon
subclass of: SO_0000010

109916081
type: Gene
SIO_000068: ncbigene

position:3602691:1
position: 3602691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3742343:1
position: 3742343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3602691-3742343:1:exon

LOC109916081
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109916081
product: myosin-11-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609663.1
SIO_010081: LOC109916081
subclass of: SO_0000673
so part of: LOC109916081
location: join(3602691..3602874,3630291..3630318,3649302..3649353,3653817..3653909,3660459..3660522,3675149..3675247,3675344..3675487,3682184..3682279,3682370..3682488,3688234..3688386,3689371..3689544,3691337..3691510,3692124..3692238,3695030..3695220,3697829..3697950,3698665..3698734,3702085..3702245,3702797..3702905,3705099..3705230,3706263..3706469,3707653..3707790,3708628..3708751,3710835..3711006,3714525..3714737,3715570..3715714,3716851..3717057,3717984..3718088,3719599..3719751,3720747..3720995,3722129..3722341,3723037..3723249,3727437..3727598,3727850..3727978,3729950..3730081,3733241..3733449,3734674..3734782,3737689..3737861,3741541..3742343)
location: region:3602691-3742343:1
so has part: feature:3602691-3602874:1:exon
so has part: feature:3630291-3630318:1:exon
so has part: feature:3649302-3649353:1:exon
so has part: feature:3653817-3653909:1:exon
so has part: feature:3660459-3660522:1:exon
so has part: feature:3675149-3675247:1:exon
so has part: feature:3675344-3675487:1:exon
so has part: feature:3682184-3682279:1:exon
so has part: feature:3682370-3682488:1:exon
so has part: feature:3688234-3688386:1:exon
so has part: feature:3689371-3689544:1:exon
so has part: feature:3691337-3691510:1:exon
so has part: feature:3692124-3692238:1:exon
so has part: feature:3695030-3695220:1:exon
so has part: feature:3697829-3697950:1:exon
so has part: feature:3698665-3698734:1:exon
so has part: feature:3702085-3702245:1:exon
so has part: feature:3702797-3702905:1:exon
so has part: feature:3705099-3705230:1:exon
so has part: feature:3706263-3706469:1:exon
so has part: feature:3707653-3707790:1:exon
so has part: feature:3708628-3708751:1:exon
so has part: feature:3710835-3711006:1:exon
so has part: feature:3714525-3714737:1:exon
so has part: feature:3715570-3715714:1:exon
so has part: feature:3716851-3717057:1:exon
so has part: feature:3717984-3718088:1:exon
so has part: feature:3719599-3719751:1:exon
so has part: feature:3720747-3720995:1:exon
so has part: feature:3722129-3722341:1:exon
so has part: feature:3723037-3723249:1:exon
so has part: feature:3727437-3727598:1:exon
so has part: feature:3727850-3727978:1:exon
so has part: feature:3729950-3730081:1:exon
so has part: feature:3733241-3733449:1:exon
so has part: feature:3734674-3734782:1:exon
so has part: feature:3737689-3737861:1:exon
so has part: feature:3741541-3742343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3602691-3602874:1:exon

position:3602874:1
position: 3602874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3630291-3630318:1:exon

position:3630291:1
position: 3630291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3630318:1
position: 3630318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3649302-3649353:1:exon

position:3649302:1
position: 3649302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3649353:1
position: 3649353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3653817-3653909:1:exon

position:3653817:1
position: 3653817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3653909:1
position: 3653909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3660459-3660522:1:exon

position:3660459:1
position: 3660459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3660522:1
position: 3660522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3675149-3675247:1:exon

position:3675149:1
position: 3675149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3675247:1
position: 3675247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3675344-3675487:1:exon

position:3675344:1
position: 3675344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3675487:1
position: 3675487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3682184-3682279:1:exon

position:3682184:1
position: 3682184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3682279:1
position: 3682279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3682370-3682488:1:exon

position:3682370:1
position: 3682370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3682488:1
position: 3682488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3688234-3688386:1:exon

position:3688234:1
position: 3688234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3688386:1
position: 3688386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3689371-3689544:1:exon

position:3689371:1
position: 3689371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3689544:1
position: 3689544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3691337-3691510:1:exon

position:3691337:1
position: 3691337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3691510:1
position: 3691510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3692124-3692238:1:exon

position:3692124:1
position: 3692124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3692238:1
position: 3692238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3695030-3695220:1:exon

position:3695030:1
position: 3695030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3695220:1
position: 3695220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3697829-3697950:1:exon

position:3697829:1
position: 3697829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3697950:1
position: 3697950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3698665-3698734:1:exon

position:3698665:1
position: 3698665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3698734:1
position: 3698734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3702085-3702245:1:exon

position:3702085:1
position: 3702085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3702245:1
position: 3702245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3702797-3702905:1:exon

position:3702797:1
position: 3702797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3702905:1
position: 3702905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3705099-3705230:1:exon

position:3705099:1
position: 3705099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3705230:1
position: 3705230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3706263-3706469:1:exon

position:3706263:1
position: 3706263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3706469:1
position: 3706469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3707653-3707790:1:exon

position:3707653:1
position: 3707653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3707790:1
position: 3707790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3708628-3708751:1:exon

position:3708628:1
position: 3708628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3708751:1
position: 3708751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3710835-3711006:1:exon

position:3710835:1
position: 3710835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3711006:1
position: 3711006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3714525-3714737:1:exon

position:3714525:1
position: 3714525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3714737:1
position: 3714737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3715570-3715714:1:exon

position:3715570:1
position: 3715570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3715714:1
position: 3715714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3716851-3717057:1:exon

position:3716851:1
position: 3716851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3717057:1
position: 3717057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3717984-3718088:1:exon

position:3717984:1
position: 3717984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3718088:1
position: 3718088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3719599-3719751:1:exon

position:3719599:1
position: 3719599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3719751:1
position: 3719751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3720747-3720995:1:exon

position:3720747:1
position: 3720747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3720995:1
position: 3720995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3722129-3722341:1:exon

position:3722129:1
position: 3722129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3722341:1
position: 3722341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3723037-3723249:1:exon

position:3723037:1
position: 3723037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3723249:1
position: 3723249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3727437-3727598:1:exon

position:3727437:1
position: 3727437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3727598:1
position: 3727598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3727850-3727978:1:exon

position:3727850:1
position: 3727850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3727978:1
position: 3727978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3729950-3730081:1:exon

position:3729950:1
position: 3729950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3730081:1
position: 3730081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3733241-3733449:1:exon

position:3733241:1
position: 3733241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3733449:1
position: 3733449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:3734674-3734782:1:exon

position:3734674:1
position: 3734674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3734782:1
position: 3734782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:3737689-3737861:1:exon

position:3737689:1
position: 3737689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3737861:1
position: 3737861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:3741541-3742343:1:exon

position:3741541:1
position: 3741541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109916081
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109916081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin-11-like
translation: MDVVIPLFQTYSGLFCVVVNPYKMLPIYTEKIVEMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTFVLYHIIQLQHEPGFAYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAPEERTFHIFYYLLSGAGVKMKEDLLLEPFSSYRFLSNGHVPIPGQDDKDMFEETSEAMSIMGFSIEEQTSILRIVSSVLQLGNISFKKERNTDQASMPDNTVAQKVCHLLGMNVTDFTRAILSPRIKVGRDYVQKAQTKEQADFAVEALAKAMYERLFRWLLIRINKALDRTKRQGATFLGILDIAGFEIFQDNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERVTNPPGILSLLDEECWFPKATDKSFVEKVVQELGNHTKFAKPKQLKDKGDFCIVHYAGKVPYNAGNWLTKNMDPLNDNVASLLNQSSDKYVAELWRDVDRIVGLDQVAKMSESIQGASKTKKGMFRTVGQLYKEQLGKLMTTLRNTSPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIIFQEFRQRYEILTPGAIPKGFMDGKQACVLMIKSLELDSNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIISFQARSRGYLARKAFAKRQQQLNAMKVIQRNCAAYLKLRNWQWWRLFTKVKPLLQVTRQEEEMQLKEDELQRTKEKQQKAELSLSELEKKHTQIMEEKTTLQEQLQAETELYAEAEEMRIRLESKKQELEEILHEMEARIEEEEERNQQMLTEKKKMQTQILDLEEQLDEEEAARQKLQLEKVTLEAKLKKMDDDIIILEDQNIKFAKEKKLLEERIADFTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKTRQELEKLKRKLEGEGADLHDQLAELQQQIAELKMQLAKKEEELQAAMSRLDEEIALKNNALKKIRELEAFISDLQEDLDSEKSARNKVEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREHEVSEMKRALEEESRSHEAQIHEMRQKHSQAIEEVTEQLEQAKRARANLEKNKQTLEKENNELSNEVRSLSTAKAEIEHKKKKLEGQVQEFQVKVADGERARAELNEKVHKLQNELDNVTTILNDAEGKSIKLAKDVSSLGSQLQDAQELLQEETRQKLNLSTRLRQLEDDKNNLQEQLDEESEAKRNLERQISTLTAQLSDAKKKLNDDVSALEGLEEGKKKLQREIEAITQNFEEKAAAYDKLEKTKNRLQQELDDLLVDLDNQRQLVSNLEKKQKKFDQMLAEEKNISAKYADERDRAEADAREKETKALALTRALDEALQSKEDLERVNKQLRAEMEDIMSSKDDVGKNVHDLEKSKRALDQQVEEMKTQLEELEDELQATEDAKLRLEVNLQALKTQFERELQARDEQNEEKRRQLVKQVHELESELEDERKQRTVAAAAKKKLEIDLSDLEGQVEVAIKGREDAIKQLKKLQAQMKDYQRELEDARNSREEVLAQAKENEKKAKNLEADLLQVQEDLAAAERSRRHAEQEKEELAEELAGNVSGKYVTGRSSLFFFLLKSEQLSNELSAERSANQKNESARQQLERQNKELKAKLQEMEGTVKSKFKSTITALESKIAQLEEQLEAEVKEKQATTKATRRTEKKLKEILLQLEDERRHGEQYKEQAEKSNSRMKQLKRQLEEAEEESQRINAARRKLQRELEEATETNEAMSRECNTLKNKLRRGNEPMLSGTRRSGGRRGVIDNTSLENSDEDAGGRDADFNGTKSNE
SIO_010081: LOC109916081
subclass of: SO_0000673
so part of: LOC109916081
location: join(3602691..3602874,3630291..3630318,3649302..3649353,3653817..3653909,3660459..3660522,3675149..3675247,3675344..3675487,3682184..3682279,3682370..3682488,3688234..3688386,3689371..3689544,3691337..3691510,3692124..3692238,3695030..3695220,3697829..3697950,3698665..3698734,3702085..3702245,3702797..3702905,3705099..3705230,3706263..3706469,3707653..3707790,3708628..3708751,3710835..3711006,3714525..3714737,3715570..3715714,3716851..3717057,3717984..3718088,3719599..3719751,3720747..3720995,3722129..3722341,3723037..3723249,3727437..3727598,3727850..3727978,3729950..3730081,3733241..3733449,3734674..3734782,3737689..3737861,3741541..3741682)
location: region:3602691-3741682:1
so has part: feature:3602691-3602874:1:exon
so has part: feature:3630291-3630318:1:exon
so has part: feature:3649302-3649353:1:exon
so has part: feature:3653817-3653909:1:exon
so has part: feature:3660459-3660522:1:exon
so has part: feature:3675149-3675247:1:exon
so has part: feature:3675344-3675487:1:exon
so has part: feature:3682184-3682279:1:exon
so has part: feature:3682370-3682488:1:exon
so has part: feature:3688234-3688386:1:exon
so has part: feature:3689371-3689544:1:exon
so has part: feature:3691337-3691510:1:exon
so has part: feature:3692124-3692238:1:exon
so has part: feature:3695030-3695220:1:exon
so has part: feature:3697829-3697950:1:exon
so has part: feature:3698665-3698734:1:exon
so has part: feature:3702085-3702245:1:exon
so has part: feature:3702797-3702905:1:exon
so has part: feature:3705099-3705230:1:exon
so has part: feature:3706263-3706469:1:exon
so has part: feature:3707653-3707790:1:exon
so has part: feature:3708628-3708751:1:exon
so has part: feature:3710835-3711006:1:exon
so has part: feature:3714525-3714737:1:exon
so has part: feature:3715570-3715714:1:exon
so has part: feature:3716851-3717057:1:exon
so has part: feature:3717984-3718088:1:exon
so has part: feature:3719599-3719751:1:exon
so has part: feature:3720747-3720995:1:exon
so has part: feature:3722129-3722341:1:exon
so has part: feature:3723037-3723249:1:exon
so has part: feature:3727437-3727598:1:exon
so has part: feature:3727850-3727978:1:exon
so has part: feature:3729950-3730081:1:exon
so has part: feature:3733241-3733449:1:exon
so has part: feature:3734674-3734782:1:exon
so has part: feature:3737689-3737861:1:exon
so has part: feature:3741541-3741682:1:exon

XP_048465620.1
type: Protein
SIO_000068: ncbiprotein

position:3741682:1
position: 3741682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3602691-3602874:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3630291-3630318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3649302-3649353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3653817-3653909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3660459-3660522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675149-3675247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3675344-3675487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3682184-3682279:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3682370-3682488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3688234-3688386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3689371-3689544:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3691337-3691510:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3692124-3692238:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3695030-3695220:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3697829-3697950:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3698665-3698734:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3702085-3702245:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3702797-3702905:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3705099-3705230:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3706263-3706469:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3707653-3707790:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3708628-3708751:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3710835-3711006:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3714525-3714737:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3715570-3715714:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3716851-3717057:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3717984-3718088:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3719599-3719751:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3720747-3720995:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3722129-3722341:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3723037-3723249:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3727437-3727598:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3727850-3727978:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3729950-3730081:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3733241-3733449:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3734674-3734782:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3737689-3737861:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3741541-3741682:1:exon

nde1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: nde1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3751874..3784815)
location: region:3751874-3784815:-1
so has part: feature:3751874-3784815:-1:exon
subclass of: SO_0000010

109920769
type: Gene
SIO_000068: ncbigene

position:3751874:-1
position: 3751874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3784815:-1
position: 3784815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3751874-3784815:-1:exon

nde1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nde1
product: nudE neurodevelopment protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609625.1
SIO_010081: nde1
subclass of: SO_0000673
so part of: nde1
location: complement(join(3751874..3754891,3757031..3757185,3767300..3767382,3769346..3769519,3769628..3769764,3772517..3772665,3783689..3783842,3784686..3784815))
location: region:3751874-3784815:-1
so has part: feature:3784686-3784815:-1:exon
so has part: feature:3783689-3783842:-1:exon
so has part: feature:3772517-3772665:-1:exon
so has part: feature:3769628-3769764:-1:exon
so has part: feature:3769346-3769519:-1:exon
so has part: feature:3767300-3767382:-1:exon
so has part: feature:3757031-3757185:-1:exon
so has part: feature:3751874-3754891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3784686-3784815:-1:exon

position:3784686:-1
position: 3784686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3783689-3783842:-1:exon

position:3783689:-1
position: 3783689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3783842:-1
position: 3783842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3772517-3772665:-1:exon

position:3772517:-1
position: 3772517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772665:-1
position: 3772665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3769628-3769764:-1:exon

position:3769628:-1
position: 3769628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3769764:-1
position: 3769764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3769346-3769519:-1:exon

position:3769346:-1
position: 3769346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3769519:-1
position: 3769519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3767300-3767382:-1:exon

position:3767300:-1
position: 3767300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3767382:-1
position: 3767382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3757031-3757185:-1:exon

position:3757031:-1
position: 3757031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3757185:-1
position: 3757185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3751874-3754891:-1:exon

position:3754891:-1
position: 3754891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nde1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nde1
product: nudE neurodevelopment protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048609627.1
SIO_010081: nde1
subclass of: SO_0000673
so part of: nde1
location: complement(join(3754785..3754891,3754981..3755079,3757031..3757185,3767300..3767382,3769346..3769519,3769628..3769764,3772517..3772665,3783689..3783842,3784686..3784815))
location: region:3754785-3784815:-1
so has part: feature:3784686-3784815:-1:exon
so has part: feature:3783689-3783842:-1:exon
so has part: feature:3772517-3772665:-1:exon
so has part: feature:3769628-3769764:-1:exon
so has part: feature:3769346-3769519:-1:exon
so has part: feature:3767300-3767382:-1:exon
so has part: feature:3757031-3757185:-1:exon
so has part: feature:3754981-3755079:-1:exon
so has part: feature:3754785-3754891:-1:exon

position:3754785:-1
position: 3754785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3784686-3784815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3783689-3783842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772517-3772665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3769628-3769764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3769346-3769519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3767300-3767382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3757031-3757185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3754981-3755079:-1:exon

position:3754981:-1
position: 3754981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3755079:-1
position: 3755079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3754785-3754891:-1:exon

nde1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nde1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear distribution protein nudE homolog 1 isoform X1
translation: MDDLETMAFKSVEDEIAYWKDLAIKYQHCAQNTREELIEFQEGSRELEAELETQLEHAESRNRDLLSDNNRLRVELDLFKEKLEEHHSENYKRITMLQDELAETTAIKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLVSVQRLKDEARDLRQELAVQQKPDSIRKPTSTSSDSENATAQTSATMPLTPLICKGPSSGFPTPAMFTKDGYTGSPLTPSARISALNIVGDLLRKVGALESKLASCRNFVWDQSPNRATLSSTQNGNCAIKDNNDNRVSNANLPQYDKGLAKRLEFGTLASKVYSQATASPQGVVKILL
SIO_010081: nde1
subclass of: SO_0000673
so part of: nde1
location: complement(join(3754798..3754891,3757031..3757185,3767300..3767382,3769346..3769519,3769628..3769764,3772517..3772665,3783689..3783842,3784686..3784771))
location: region:3754798-3784771:-1
so has part: feature:3784686-3784771:-1:exon
so has part: feature:3783689-3783842:-1:exon
so has part: feature:3772517-3772665:-1:exon
so has part: feature:3769628-3769764:-1:exon
so has part: feature:3769346-3769519:-1:exon
so has part: feature:3767300-3767382:-1:exon
so has part: feature:3757031-3757185:-1:exon
so has part: feature:3754798-3754891:-1:exon

XP_048465582.1
type: Protein
SIO_000068: ncbiprotein

position:3754798:-1
position: 3754798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3784771:-1
position: 3784771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3784686-3784771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3783689-3783842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772517-3772665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3769628-3769764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3769346-3769519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3767300-3767382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3757031-3757185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3754798-3754891:-1:exon

nde1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nde1
product: nudE neurodevelopment protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_048609626.1
SIO_010081: nde1
subclass of: SO_0000673
so part of: nde1
location: complement(join(3754898..3755079,3757031..3757185,3767300..3767382,3769346..3769519,3769628..3769764,3772517..3772665,3783689..3783842,3784686..3784815))
location: region:3754898-3784815:-1
so has part: feature:3784686-3784815:-1:exon
so has part: feature:3783689-3783842:-1:exon
so has part: feature:3772517-3772665:-1:exon
so has part: feature:3769628-3769764:-1:exon
so has part: feature:3769346-3769519:-1:exon
so has part: feature:3767300-3767382:-1:exon
so has part: feature:3757031-3757185:-1:exon
so has part: feature:3754898-3755079:-1:exon

position:3754898:-1
position: 3754898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3784686-3784815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3783689-3783842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772517-3772665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3769628-3769764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3769346-3769519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3767300-3767382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3757031-3757185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3754898-3755079:-1:exon

nde1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nde1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear distribution protein nudE homolog 1 isoform X2
translation: MDDLETMAFKSVEDEIAYWKDLAIKYQHCAQNTREELIEFQEGSRELEAELETQLEHAESRNRDLLSDNNRLRVELDLFKEKLEEHHSENYKRITMLQDELAETTAIKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLVSVQRLKDEARDLRQELAVQQKPDSIRKPTSTSSDSENATAQTSATMPLTPLICKGPSSGFPTPAMFTKDGYTGSPLTPSARISALNIVGDLLRKVGALESKLASCRNFVWDQSPNRATLSSTQNGNCAIKDNNDNRVSNANLPQYDKGSQHKARKSSLADSFGNCRSKVVCSPQA
SIO_010081: nde1
subclass of: SO_0000673
so part of: nde1
location: complement(join(3754995..3755079,3757031..3757185,3767300..3767382,3769346..3769519,3769628..3769764,3772517..3772665,3783689..3783842,3784686..3784771))
location: region:3754995-3784771:-1
so has part: feature:3784686-3784771:-1:exon
so has part: feature:3783689-3783842:-1:exon
so has part: feature:3772517-3772665:-1:exon
so has part: feature:3769628-3769764:-1:exon
so has part: feature:3769346-3769519:-1:exon
so has part: feature:3767300-3767382:-1:exon
so has part: feature:3757031-3757185:-1:exon
so has part: feature:3754995-3755079:-1:exon

XP_048465583.1
type: Protein
SIO_000068: ncbiprotein

position:3754995:-1
position: 3754995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3784686-3784771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3783689-3783842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772517-3772665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3769628-3769764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3769346-3769519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3767300-3767382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3757031-3757185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3754995-3755079:-1:exon

nde1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nde1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear distribution protein nudE homolog 1 isoform X2
translation: MDDLETMAFKSVEDEIAYWKDLAIKYQHCAQNTREELIEFQEGSRELEAELETQLEHAESRNRDLLSDNNRLRVELDLFKEKLEEHHSENYKRITMLQDELAETTAIKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLVSVQRLKDEARDLRQELAVQQKPDSIRKPTSTSSDSENATAQTSATMPLTPLICKGPSSGFPTPAMFTKDGYTGSPLTPSARISALNIVGDLLRKVGALESKLASCRNFVWDQSPNRATLSSTQNGNCAIKDNNDNRVSNANLPQYDKGSQHKARKSSLADSFGNCRSKVVCSPQA
SIO_010081: nde1
subclass of: SO_0000673
so part of: nde1
location: complement(join(3754995..3755079,3757031..3757185,3767300..3767382,3769346..3769519,3769628..3769764,3772517..3772665,3783689..3783842,3784686..3784771))
location: region:3754995-3784771:-1
so has part: feature:3784686-3784771:-1:exon
so has part: feature:3783689-3783842:-1:exon
so has part: feature:3772517-3772665:-1:exon
so has part: feature:3769628-3769764:-1:exon
so has part: feature:3769346-3769519:-1:exon
so has part: feature:3767300-3767382:-1:exon
so has part: feature:3757031-3757185:-1:exon
so has part: feature:3754995-3755079:-1:exon

XP_048465584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3784686-3784771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3783689-3783842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772517-3772665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3769628-3769764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3769346-3769519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3767300-3767382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3757031-3757185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3754995-3755079:-1:exon

LOC125485704
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3788509..3805730
location: region:3788509-3805730:1
so has part: feature:3788509-3805730:1:exon
subclass of: SO_0000011

125485704
type: Gene
SIO_000068: ncbigene

position:3788509:1
position: 3788509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3805730:1
position: 3805730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3788509-3805730:1:exon

LOC125485704
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485704
product: uncharacterized LOC125485704
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_007264408.1
SIO_010081: LOC125485704
subclass of: SO_0000673
so part of: LOC125485704
location: join(3788509..3788685,3790300..3790422,3805551..3805730)
location: region:3788509-3805730:1
so has part: feature:3788509-3788685:1:exon
so has part: feature:3790300-3790422:1:exon
so has part: feature:3805551-3805730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3788509-3788685:1:exon

position:3788685:1
position: 3788685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3790300-3790422:1:exon

position:3790300:1
position: 3790300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3790422:1
position: 3790422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3805551-3805730:1:exon

position:3805551:1
position: 3805551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109920768
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109920768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3814959..3857733
location: region:3814959-3857733:1
so has part: feature:3814959-3857733:1:exon
subclass of: SO_0000010

109920768
type: Gene
SIO_000068: ncbigene

position:3814959:1
position: 3814959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3857733:1
position: 3857733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3814959-3857733:1:exon

LOC109920768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109920768
product: meiosis regulator and mRNA stability factor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609896.1
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
location: join(3814959..3815182,3816750..3817415,3819446..3819614,3821261..3821484,3821836..3821953,3822377..3822549,3823765..3824199,3831280..3831440,3831855..3832013,3832258..3832450,3833775..3833953,3836924..3837004,3837628..3837864,3838155..3838274,3839794..3839969,3842523..3842743,3843839..3843981,3845005..3845138,3846404..3846606,3847340..3847567,3847671..3847901,3849588..3849800,3851364..3851424,3852899..3853042,3853907..3854077,3855477..3857733)
location: region:3814959-3857733:1
so has part: feature:3814959-3815182:1:exon
so has part: feature:3816750-3817415:1:exon
so has part: feature:3819446-3819614:1:exon
so has part: feature:3821261-3821484:1:exon
so has part: feature:3821836-3821953:1:exon
so has part: feature:3822377-3822549:1:exon
so has part: feature:3823765-3824199:1:exon
so has part: feature:3831280-3831440:1:exon
so has part: feature:3831855-3832013:1:exon
so has part: feature:3832258-3832450:1:exon
so has part: feature:3833775-3833953:1:exon
so has part: feature:3836924-3837004:1:exon
so has part: feature:3837628-3837864:1:exon
so has part: feature:3838155-3838274:1:exon
so has part: feature:3839794-3839969:1:exon
so has part: feature:3842523-3842743:1:exon
so has part: feature:3843839-3843981:1:exon
so has part: feature:3845005-3845138:1:exon
so has part: feature:3846404-3846606:1:exon
so has part: feature:3847340-3847567:1:exon
so has part: feature:3847671-3847901:1:exon
so has part: feature:3849588-3849800:1:exon
so has part: feature:3851364-3851424:1:exon
so has part: feature:3852899-3853042:1:exon
so has part: feature:3853907-3854077:1:exon
so has part: feature:3855477-3857733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3814959-3815182:1:exon

position:3815182:1
position: 3815182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3816750-3817415:1:exon

position:3816750:1
position: 3816750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3817415:1
position: 3817415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3819446-3819614:1:exon

position:3819446:1
position: 3819446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3819614:1
position: 3819614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3821261-3821484:1:exon

position:3821261:1
position: 3821261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3821484:1
position: 3821484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3821836-3821953:1:exon

position:3821836:1
position: 3821836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3821953:1
position: 3821953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3822377-3822549:1:exon

position:3822377:1
position: 3822377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3822549:1
position: 3822549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3823765-3824199:1:exon

position:3823765:1
position: 3823765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3824199:1
position: 3824199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3831280-3831440:1:exon

position:3831280:1
position: 3831280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3831440:1
position: 3831440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3831855-3832013:1:exon

position:3831855:1
position: 3831855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3832013:1
position: 3832013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3832258-3832450:1:exon

position:3832258:1
position: 3832258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3832450:1
position: 3832450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3833775-3833953:1:exon

position:3833775:1
position: 3833775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3833953:1
position: 3833953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3836924-3837004:1:exon

position:3836924:1
position: 3836924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3837004:1
position: 3837004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3837628-3837864:1:exon

position:3837628:1
position: 3837628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3837864:1
position: 3837864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3838155-3838274:1:exon

position:3838155:1
position: 3838155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3838274:1
position: 3838274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3839794-3839969:1:exon

position:3839794:1
position: 3839794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3839969:1
position: 3839969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3842523-3842743:1:exon

position:3842523:1
position: 3842523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3842743:1
position: 3842743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3843839-3843981:1:exon

position:3843839:1
position: 3843839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3843981:1
position: 3843981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3845005-3845138:1:exon

position:3845005:1
position: 3845005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3845138:1
position: 3845138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3846404-3846606:1:exon

position:3846404:1
position: 3846404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3846606:1
position: 3846606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3847340-3847567:1:exon

position:3847340:1
position: 3847340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3847567:1
position: 3847567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3847671-3847901:1:exon

position:3847671:1
position: 3847671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3847901:1
position: 3847901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3849588-3849800:1:exon

position:3849588:1
position: 3849588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3849800:1
position: 3849800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3851364-3851424:1:exon

position:3851364:1
position: 3851364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3851424:1
position: 3851424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3852899-3853042:1:exon

position:3852899:1
position: 3852899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3853042:1
position: 3853042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3853907-3854077:1:exon

position:3853907:1
position: 3853907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3854077:1
position: 3854077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3855477-3857733:1:exon

position:3855477:1
position: 3855477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109920768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109920768
product: meiosis regulator and mRNA stability factor 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609898.1
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
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position:3852944:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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LOC109920768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109920768
product: meiosis regulator and mRNA stability factor 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609901.1
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
location: join(3814959..3815182,3816750..3817415,3819446..3819614,3821261..3821484,3821836..3821953,3822377..3822549,3823765..3824199,3831280..3831440,3831855..3832013,3832258..3832450,3833775..3833953,3836924..3837004,3837628..3837864,3838155..3838274,3839794..3839969,3842523..3842743,3843839..3843981,3845005..3845138,3846404..3846606,3847671..3847901,3849588..3849800,3851364..3851424,3852899..3853042,3853907..3854077,3855477..3857733)
location: region:3814959-3857733:1
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urn:…
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LOC109920768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109920768
product: meiosis regulator and mRNA stability factor 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609897.1
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
location: join(3814965..3815182,3816750..3817415,3819446..3819614,3821261..3821484,3821836..3821953,3822377..3822549,3823765..3824199,3831280..3831440,3831855..3832013,3832258..3832450,3833775..3833953,3836924..3837004,3837628..3837864,3838155..3838274,3839794..3839969,3842523..3842743,3843839..3843981,3845005..3845138,3846404..3846606,3847340..3847567,3847671..3847901,3849588..3849800,3851364..3851424,3852899..3853042,3853907..3854077,3855495..3857733)
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position:3814965:1
position: 3814965
reference: sequence
type: ForwardStrandPosition
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urn:…
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SIO_000628: feature:3855495-3857733:1:exon

position:3855495:1
position: 3855495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109920768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109920768
product: meiosis regulator and mRNA stability factor 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609899.1
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
location: join(3814965..3815182,3816750..3817415,3819446..3819614,3821261..3821484,3821836..3821953,3822377..3822549,3823765..3824199,3831280..3831440,3831855..3832013,3832258..3832450,3833775..3833953,3836924..3837004,3837628..3837864,3838155..3838274,3839794..3839969,3842523..3842743,3843839..3843981,3845005..3845138,3846404..3846606,3847340..3847567,3847671..3847901,3849588..3849800,3851364..3851424,3852944..3853042,3853907..3854077,3855495..3857733)
location: region:3814965-3857733:1
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urn:…
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urn:…
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SIO_000628: feature:3855495-3857733:1:exon

LOC109920768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109920768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis regulator and mRNA stability factor 1 isoform X1
translation: MDGNRKENSFCGKPVGWLNQADNDGSVSKPWLWKISNCFSTVEQILPTSSKTKNCMENNKPKLELKDFPPPSQHAIPRFFASAPPSDIQAFQQQQSTGTKVSCCPHCGNEASCSPHTPNGGGCIHSVNGGALEHTNAGTVTCQIGSRPTLHSSKSCKVAVTNDHLAGPYSENAVSGCQLQPSLSQHLSCCGNLFKQLQPFHSNVHKQHQTPMPQNYNASNCFSCMELSGGVSGHLEDRMSQAELPTRVCTNSLQFHTAPMFLKGSHCCDDCLNKPPRRPAVDVKKIWPNIAPPAQSVPVPISLCNGVQTEGQTAEAPTLTGNLGLQPPKFGSPDVGTVGQQENLPPIGVFWDIENCSVPTGRSAMTIVQRIRQQFFQGHREAEFMCVCDISKENKEVIQELNNCQVTVAHINATAKNAADDKLRQSLRRFADTHTAPSTVILVSSDVNFALELSDLRHRHGFQIILVHKNQVSDTLLQHAHKHFKFEEFVSNLPPRLPEKTPQCHTLLYAYNLPLNRDSKQVSNRLRRLSDNCGGKVLSITGSSAILRFTSQESAERAQKRMENEDVFGNKILVSFTPKNKDLCESKNNCFTVEKAKSPKKANKMTKLSQRNKGLDDQLPNSKNSTVKNLPTPQGSAIKDNNVRSLQELCGMESKAKQSVRTQKIKKQGTESPPVGNCTSTYSPVTAKNVGNGDSFSGNMKRETPSSRSSLESPIDKIEKKADFHVSSPSAFSKLSVSRHNTPPIPGHGTWATRSPSPSLSNRLCSVSANPANQTHYSDPHTGPFANGADVQVSNLDYRMSRKELQQILHEIFLRHGKVKNVELSPHTDYQLKATVQMGSLQEAILAVNNLHRYKIGSKRIQVSLATGSANKSLALLGSETISILQDAPACCLPLFKFTEIYEKRFGHKLFVSDLYKLTDTVAIRDQVNGRMVCLLPSSQTRQSPMGSVLSYDGSSSNCSPVIFEELEYHEPICKQHCSNNVYNENEFDPDSYKIPFIILSLKTFAPQVHSLLHTHEGTVPLLSFLDCYAAEFTVLKIVEEGQGGVPLEHLITCVPGVNIVTAQDGIKVVKWVQNKPPPPNVDPWLLRCKSPVGNPQLIQFSREVIDLLKSQAHCFICQNKFIPTYHHHFGKQCRVSDYGFSKLVELLEAVPHVLQILGLGAKRLLTLTHRAQVKRFTQDLLKLLKSQASKQVFIREFGQAYHWCFSKDWNVTDYGVCELADLLSEIPDTTICVSQQDDDTVISIPKRERTPEEIERTKQFAKEVVDLLRHQSHCRMPFNKFIPAYHHHFGRQCKLTYYGFNKLMELFEAIPDVLQVLECGEEKFLVLTENEQIKALTAQLVKLLRSQKDNCMTLSDFLLEYNNTYGYTLRLQDYDVNTVAELMQKLCHVAKICSTPKGKQLQLINRKSLRTVTAQLLVLLMSLDDVSCLTVDDLKKRFDATYGSPLVPSEYGFMSLTELLKSLPYLVEVFTDDTGEEYVKLTKVYQFAKNVRALLHTYHYQQIFLTEFPSTYHKYTGEVLQPKVYGYSSIEDLLIAIPQVIWIKGHGHKRIVVLKNDMKVRNSSACCSPACMVEECGQTQGDLKRPVTLAVQNSSSNETKELETDSSCSNQTEQELLCLGNQSPVDLLCGPVPSCLPSPQLRPDPVVLQNADLIRFEEQSPNVADMLILTEEEKTVLPAAMTEEAFTSGSITNQIKDNLPTTCQPEDEQEIKSPHLEVTASPVRKPRSKVKLAANFSLVPPINI
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
location: join(3815027..3815182,3816750..3817415,3819446..3819614,3821261..3821484,3821836..3821953,3822377..3822549,3823765..3824199,3831280..3831440,3831855..3832013,3832258..3832450,3833775..3833953,3836924..3837004,3837628..3837864,3838155..3838274,3839794..3839969,3842523..3842743,3843839..3843981,3845005..3845138,3846404..3846606,3847340..3847567,3847671..3847901,3849588..3849800,3851364..3851424,3852899..3853042,3853907..3854077,3855477..3855718)
location: region:3815027-3855718:1
so has part: feature:3815027-3815182:1:exon
so has part: feature:3816750-3817415:1:exon
so has part: feature:3819446-3819614:1:exon
so has part: feature:3821261-3821484:1:exon
so has part: feature:3821836-3821953:1:exon
so has part: feature:3822377-3822549:1:exon
so has part: feature:3823765-3824199:1:exon
so has part: feature:3831280-3831440:1:exon
so has part: feature:3831855-3832013:1:exon
so has part: feature:3832258-3832450:1:exon
so has part: feature:3833775-3833953:1:exon
so has part: feature:3836924-3837004:1:exon
so has part: feature:3837628-3837864:1:exon
so has part: feature:3838155-3838274:1:exon
so has part: feature:3839794-3839969:1:exon
so has part: feature:3842523-3842743:1:exon
so has part: feature:3843839-3843981:1:exon
so has part: feature:3845005-3845138:1:exon
so has part: feature:3846404-3846606:1:exon
so has part: feature:3847340-3847567:1:exon
so has part: feature:3847671-3847901:1:exon
so has part: feature:3849588-3849800:1:exon
so has part: feature:3851364-3851424:1:exon
so has part: feature:3852899-3853042:1:exon
so has part: feature:3853907-3854077:1:exon
so has part: feature:3855477-3855718:1:exon

XP_048465853.1
type: Protein
SIO_000068: ncbiprotein

position:3815027:1
position: 3815027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3855718:1
position: 3855718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3815027-3815182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816750-3817415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3819446-3819614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3821261-3821484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3821836-3821953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3822377-3822549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3823765-3824199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3831280-3831440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3831855-3832013:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3832258-3832450:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3833775-3833953:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3836924-3837004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3837628-3837864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3838155-3838274:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3839794-3839969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3842523-3842743:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3843839-3843981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3845005-3845138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3846404-3846606:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3847340-3847567:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3847671-3847901:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3849588-3849800:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3851364-3851424:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3852899-3853042:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3853907-3854077:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3855477-3855718:1:exon

LOC109920768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109920768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis regulator and mRNA stability factor 1 isoform X2
translation: MDGNRKENSFCGKPVGWLNQADNDGSVSKPWLWKISNCFSTVEQILPTSSKTKNCMENNKPKLELKDFPPPSQHAIPRFFASAPPSDIQAFQQQQSTGTKVSCCPHCGNEASCSPHTPNGGGCIHSVNGGALEHTNAGTVTCQIGSRPTLHSSKSCKVAVTNDHLAGPYSENAVSGCQLQPSLSQHLSCCGNLFKQLQPFHSNVHKQHQTPMPQNYNASNCFSCMELSGGVSGHLEDRMSQAELPTRVCTNSLQFHTAPMFLKGSHCCDDCLNKPPRRPAVDVKKIWPNIAPPAQSVPVPISLCNGVQTEGQTAEAPTLTGNLGLQPPKFGSPDVGTVGQQENLPPIGVFWDIENCSVPTGRSAMTIVQRIRQQFFQGHREAEFMCVCDISKENKEVIQELNNCQVTVAHINATAKNAADDKLRQSLRRFADTHTAPSTVILVSSDVNFALELSDLRHRHGFQIILVHKNQVSDTLLQHAHKHFKFEEFVSNLPPRLPEKTPQCHTLLYAYNLPLNRDSKQVSNRLRRLSDNCGGKVLSITGSSAILRFTSQESAERAQKRMENEDVFGNKILVSFTPKNKDLCESKNNCFTVEKAKSPKKANKMTKLSQRNKGLDDQLPNSKNSTVKNLPTPQGSAIKDNNVRSLQELCGMESKAKQSVRTQKIKKQGTESPPVGNCTSTYSPVTAKNVGNGDSFSGNMKRETPSSRSSLESPIDKIEKKADFHVSSPSAFSKLSVSRHNTPPIPGHGTWATRSPSPSLSNRLCSVSANPANQTHYSDPHTGPFANGADVQVSNLDYRMSRKELQQILHEIFLRHGKVKNVELSPHTDYQLKATVQMGSLQEAILAVNNLHRYKIGSKRIQVSLATGSANKSLALLGSETISILQDAPACCLPLFKFTEIYEKRFGHKLFVSDLYKLTDTVAIRDQVNGRMVCLLPSSQTRQSPMGSVLSYDGSSSNCSPVIFEELEYHEPICKQHCSNNVYNENEFDPDSYKIPFIILSLKTFAPQVHSLLHTHEGTVPLLSFLDCYAAEFTVLKIVEEGQGGVPLEHLITCVPGVNIVTAQDGIKVVKWVQNKPPPPNVDPWLLRCKSPVGNPQLIQFSREVIDLLKSQAHCFICQNKFIPTYHHHFGKQCRVSDYGFSKLVELLEAVPHVLQILGLGAKRLLTLTHRAQVKRFTQDLLKLLKSQASKQVFIREFGQAYHWCFSKDWNVTDYGVCELADLLSEIPDTTICVSQQDDDTVISIPKRERTPEEIERTKQFAKEVVDLLRHQSHCRMPFNKFIPAYHHHFGRQCKLTYYGFNKLMELFEAIPDVLQVLECGEEKFLVLTENEQIKALTAQLVKLLRSQKDNCMTLSDFLLEYNNTYGYTLRLQDYDVNTVAELMQKLCHVAKICSTPKGKQLQLINRKSLRTVTAQLLVLLMSLDDVSCLTVDDLKKRFDATYGSPLVPSEYGFMSLTELLKSLPYLVEVFTDDTGEEYVKLTKVYQFAKNVRALLHTYHYQQIFLTEFPSTYHKYTGEVLQPKVYGYSSIEDLLIAIPQVIWIKGHGHKRIVVLKNDMKVRNSSACCSPACMVEECGQTQGDLKRPVTLAVQNSSSNETKELETDSSCSNQTEQELLCLGNQSPVDLLCGPVPSCLPSPQLRPDPVVLQNADLIRFEEQSPNVAEEEKTVLPAAMTEEAFTSGSITNQIKDNLPTTCQPEDEQEIKSPHLEVTASPVRKPRSKVKLAANFSLVPPINI
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
location: join(3815027..3815182,3816750..3817415,3819446..3819614,3821261..3821484,3821836..3821953,3822377..3822549,3823765..3824199,3831280..3831440,3831855..3832013,3832258..3832450,3833775..3833953,3836924..3837004,3837628..3837864,3838155..3838274,3839794..3839969,3842523..3842743,3843839..3843981,3845005..3845138,3846404..3846606,3847340..3847567,3847671..3847901,3849588..3849800,3851364..3851424,3852899..3853042,3853907..3854077,3855495..3855718)
location: region:3815027-3855718:1
so has part: feature:3815027-3815182:1:exon
so has part: feature:3816750-3817415:1:exon
so has part: feature:3819446-3819614:1:exon
so has part: feature:3821261-3821484:1:exon
so has part: feature:3821836-3821953:1:exon
so has part: feature:3822377-3822549:1:exon
so has part: feature:3823765-3824199:1:exon
so has part: feature:3831280-3831440:1:exon
so has part: feature:3831855-3832013:1:exon
so has part: feature:3832258-3832450:1:exon
so has part: feature:3833775-3833953:1:exon
so has part: feature:3836924-3837004:1:exon
so has part: feature:3837628-3837864:1:exon
so has part: feature:3838155-3838274:1:exon
so has part: feature:3839794-3839969:1:exon
so has part: feature:3842523-3842743:1:exon
so has part: feature:3843839-3843981:1:exon
so has part: feature:3845005-3845138:1:exon
so has part: feature:3846404-3846606:1:exon
so has part: feature:3847340-3847567:1:exon
so has part: feature:3847671-3847901:1:exon
so has part: feature:3849588-3849800:1:exon
so has part: feature:3851364-3851424:1:exon
so has part: feature:3852899-3853042:1:exon
so has part: feature:3853907-3854077:1:exon
so has part: feature:3855495-3855718:1:exon

XP_048465854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815027-3815182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816750-3817415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3819446-3819614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3821261-3821484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3821836-3821953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3822377-3822549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3823765-3824199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3831280-3831440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3831855-3832013:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3832258-3832450:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3833775-3833953:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3836924-3837004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3837628-3837864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3838155-3838274:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3839794-3839969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3842523-3842743:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3843839-3843981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3845005-3845138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3846404-3846606:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3847340-3847567:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3847671-3847901:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3849588-3849800:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3851364-3851424:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3852899-3853042:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3853907-3854077:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3855495-3855718:1:exon

LOC109920768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109920768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis regulator and mRNA stability factor 1 isoform X3
translation: MDGNRKENSFCGKPVGWLNQADNDGSVSKPWLWKISNCFSTVEQILPTSSKTKNCMENNKPKLELKDFPPPSQHAIPRFFASAPPSDIQAFQQQQSTGTKVSCCPHCGNEASCSPHTPNGGGCIHSVNGGALEHTNAGTVTCQIGSRPTLHSSKSCKVAVTNDHLAGPYSENAVSGCQLQPSLSQHLSCCGNLFKQLQPFHSNVHKQHQTPMPQNYNASNCFSCMELSGGVSGHLEDRMSQAELPTRVCTNSLQFHTAPMFLKGSHCCDDCLNKPPRRPAVDVKKIWPNIAPPAQSVPVPISLCNGVQTEGQTAEAPTLTGNLGLQPPKFGSPDVGTVGQQENLPPIGVFWDIENCSVPTGRSAMTIVQRIRQQFFQGHREAEFMCVCDISKENKEVIQELNNCQVTVAHINATAKNAADDKLRQSLRRFADTHTAPSTVILVSSDVNFALELSDLRHRHGFQIILVHKNQVSDTLLQHAHKHFKFEEFVSNLPPRLPEKTPQCHTLLYAYNLPLNRDSKQVSNRLRRLSDNCGGKVLSITGSSAILRFTSQESAERAQKRMENEDVFGNKILVSFTPKNKDLCESKNNCFTVEKAKSPKKANKMTKLSQRNKGLDDQLPNSKNSTVKNLPTPQGSAIKDNNVRSLQELCGMESKAKQSVRTQKIKKQGTESPPVGNCTSTYSPVTAKNVGNGDSFSGNMKRETPSSRSSLESPIDKIEKKADFHVSSPSAFSKLSVSRHNTPPIPGHGTWATRSPSPSLSNRLCSVSANPANQTHYSDPHTGPFANGADVQVSNLDYRMSRKELQQILHEIFLRHGKVKNVELSPHTDYQLKATVQMGSLQEAILAVNNLHRYKIGSKRIQVSLATGSANKSLALLGSETISILQDAPACCLPLFKFTEIYEKRFGHKLFVSDLYKLTDTVAIRDQVNGRMVCLLPSSQTRQSPMGSVLSYDGSSSNCSPVIFEELEYHEPICKQHCSNNVYNENEFDPDSYKIPFIILSLKTFAPQVHSLLHTHEGTVPLLSFLDCYAAEFTVLKIVEEGQGGVPLEHLITCVPGVNIVTAQDGIKVVKWVQNKPPPPNVDPWLLRCKSPVGNPQLIQFSREVIDLLKSQAHCFICQNKFIPTYHHHFGKQCRVSDYGFSKLVELLEAVPHVLQILGLGAKRLLTLTHRAQVKRFTQDLLKLLKSQASKQVFIREFGQAYHWCFSKDWNVTDYGVCELADLLSEIPDTTICVSQQDDDTVISIPKRERTPEEIERTKQFAKEVVDLLRHQSHCRMPFNKFIPAYHHHFGRQCKLTYYGFNKLMELFEAIPDVLQVLECGEEKFLVLTENEQIKALTAQLVKLLRSQKDNCMTLSDFLLEYNNTYGYTLRLQDYDVNTVAELMQKLCHVAKICSTPKGKQLQLINRKSLRTVTAQLLVLLMSLDDVSCLTVDDLKKRFDATYGSPLVPSEYGFMSLTELLKSLPYLVEVFTDDTGEEYVKLTKVYQFAKNVRALLHTYHYQQIFLTEFPSTYHKYTGEVLQPKVYGYSSIEDLLIAIPQVIWIKGHGHKRIVVLKNDMKECGQTQGDLKRPVTLAVQNSSSNETKELETDSSCSNQTEQELLCLGNQSPVDLLCGPVPSCLPSPQLRPDPVVLQNADLIRFEEQSPNVADMLILTEEEKTVLPAAMTEEAFTSGSITNQIKDNLPTTCQPEDEQEIKSPHLEVTASPVRKPRSKVKLAANFSLVPPINI
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
location: join(3815027..3815182,3816750..3817415,3819446..3819614,3821261..3821484,3821836..3821953,3822377..3822549,3823765..3824199,3831280..3831440,3831855..3832013,3832258..3832450,3833775..3833953,3836924..3837004,3837628..3837864,3838155..3838274,3839794..3839969,3842523..3842743,3843839..3843981,3845005..3845138,3846404..3846606,3847340..3847567,3847671..3847901,3849588..3849800,3851364..3851424,3852944..3853042,3853907..3854077,3855477..3855718)
location: region:3815027-3855718:1
so has part: feature:3815027-3815182:1:exon
so has part: feature:3816750-3817415:1:exon
so has part: feature:3819446-3819614:1:exon
so has part: feature:3821261-3821484:1:exon
so has part: feature:3821836-3821953:1:exon
so has part: feature:3822377-3822549:1:exon
so has part: feature:3823765-3824199:1:exon
so has part: feature:3831280-3831440:1:exon
so has part: feature:3831855-3832013:1:exon
so has part: feature:3832258-3832450:1:exon
so has part: feature:3833775-3833953:1:exon
so has part: feature:3836924-3837004:1:exon
so has part: feature:3837628-3837864:1:exon
so has part: feature:3838155-3838274:1:exon
so has part: feature:3839794-3839969:1:exon
so has part: feature:3842523-3842743:1:exon
so has part: feature:3843839-3843981:1:exon
so has part: feature:3845005-3845138:1:exon
so has part: feature:3846404-3846606:1:exon
so has part: feature:3847340-3847567:1:exon
so has part: feature:3847671-3847901:1:exon
so has part: feature:3849588-3849800:1:exon
so has part: feature:3851364-3851424:1:exon
so has part: feature:3852944-3853042:1:exon
so has part: feature:3853907-3854077:1:exon
so has part: feature:3855477-3855718:1:exon

XP_048465855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815027-3815182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816750-3817415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3819446-3819614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3821261-3821484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3821836-3821953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3822377-3822549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3823765-3824199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3831280-3831440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3831855-3832013:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3832258-3832450:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3833775-3833953:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3836924-3837004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3837628-3837864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3838155-3838274:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3839794-3839969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3842523-3842743:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3843839-3843981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3845005-3845138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3846404-3846606:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3847340-3847567:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3847671-3847901:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3849588-3849800:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3851364-3851424:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3852944-3853042:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3853907-3854077:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3855477-3855718:1:exon

LOC109920768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109920768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis regulator and mRNA stability factor 1 isoform X4
translation: MDGNRKENSFCGKPVGWLNQADNDGSVSKPWLWKISNCFSTVEQILPTSSKTKNCMENNKPKLELKDFPPPSQHAIPRFFASAPPSDIQAFQQQQSTGTKVSCCPHCGNEASCSPHTPNGGGCIHSVNGGALEHTNAGTVTCQIGSRPTLHSSKSCKVAVTNDHLAGPYSENAVSGCQLQPSLSQHLSCCGNLFKQLQPFHSNVHKQHQTPMPQNYNASNCFSCMELSGGVSGHLEDRMSQAELPTRVCTNSLQFHTAPMFLKGSHCCDDCLNKPPRRPAVDVKKIWPNIAPPAQSVPVPISLCNGVQTEGQTAEAPTLTGNLGLQPPKFGSPDVGTVGQQENLPPIGVFWDIENCSVPTGRSAMTIVQRIRQQFFQGHREAEFMCVCDISKENKEVIQELNNCQVTVAHINATAKNAADDKLRQSLRRFADTHTAPSTVILVSSDVNFALELSDLRHRHGFQIILVHKNQVSDTLLQHAHKHFKFEEFVSNLPPRLPEKTPQCHTLLYAYNLPLNRDSKQVSNRLRRLSDNCGGKVLSITGSSAILRFTSQESAERAQKRMENEDVFGNKILVSFTPKNKDLCESKNNCFTVEKAKSPKKANKMTKLSQRNKGLDDQLPNSKNSTVKNLPTPQGSAIKDNNVRSLQELCGMESKAKQSVRTQKIKKQGTESPPVGNCTSTYSPVTAKNVGNGDSFSGNMKRETPSSRSSLESPIDKIEKKADFHVSSPSAFSKLSVSRHNTPPIPGHGTWATRSPSPSLSNRLCSVSANPANQTHYSDPHTGPFANGADVQVSNLDYRMSRKELQQILHEIFLRHGKVKNVELSPHTDYQLKATVQMGSLQEAILAVNNLHRYKIGSKRIQVSLATGSANKSLALLGSETISILQDAPACCLPLFKFTEIYEKRFGHKLFVSDLYKLTDTVAIRDQVNGRMVCLLPSSQTRQSPMGSVLSYDGSSSNCSPVIFEELEYHEPICKQHCSNNVYNENEFDPDSYKIPFIILSLKTFAPQVHSLLHTHEGTVPLLSFLDCYAAEFTVLKIVEEGQGGVPLEHLITCVPGVNIVTAQDGIKVVKWVQNKPPPPNVDPWLLRCKSPVGNPQLIQFSREVIDLLKSQAHCFICQNKFIPTYHHHFGKQCRVSDYGFSKLVELLEAVPHVLQILGLGAKRLLTLTHRAQVKRFTQDLLKLLKSQASKQVFIREFGQAYHWCFSKDWNVTDYGVCELADLLSEIPDTTICVSQQDDDTVISIPKRERTPEEIERTKQFAKEVVDLLRHQSHCRMPFNKFIPAYHHHFGRQCKLTYYGFNKLMELFEAIPDVLQVLECGEEKFLVLTENEQIKALTAQLVKLLRSQKDNCMTLSDFLLEYNNTYGYTLRLQDYDVNTVAELMQKLCHVAKICSTPKGKQLQLINRKSLRTVTAQLLVLLMSLDDVSCLTVDDLKKRFDATYGSPLVPSEYGFMSLTELLKSLPYLVEVFTDDTGEEYVKLTKVYQFAKNVRALLHTYHYQQIFLTEFPSTYHKYTGEVLQPKVYGYSSIEDLLIAIPQVIWIKGHGHKRIVVLKNDMKECGQTQGDLKRPVTLAVQNSSSNETKELETDSSCSNQTEQELLCLGNQSPVDLLCGPVPSCLPSPQLRPDPVVLQNADLIRFEEQSPNVAEEEKTVLPAAMTEEAFTSGSITNQIKDNLPTTCQPEDEQEIKSPHLEVTASPVRKPRSKVKLAANFSLVPPINI
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
location: join(3815027..3815182,3816750..3817415,3819446..3819614,3821261..3821484,3821836..3821953,3822377..3822549,3823765..3824199,3831280..3831440,3831855..3832013,3832258..3832450,3833775..3833953,3836924..3837004,3837628..3837864,3838155..3838274,3839794..3839969,3842523..3842743,3843839..3843981,3845005..3845138,3846404..3846606,3847340..3847567,3847671..3847901,3849588..3849800,3851364..3851424,3852944..3853042,3853907..3854077,3855495..3855718)
location: region:3815027-3855718:1
so has part: feature:3815027-3815182:1:exon
so has part: feature:3816750-3817415:1:exon
so has part: feature:3819446-3819614:1:exon
so has part: feature:3821261-3821484:1:exon
so has part: feature:3821836-3821953:1:exon
so has part: feature:3822377-3822549:1:exon
so has part: feature:3823765-3824199:1:exon
so has part: feature:3831280-3831440:1:exon
so has part: feature:3831855-3832013:1:exon
so has part: feature:3832258-3832450:1:exon
so has part: feature:3833775-3833953:1:exon
so has part: feature:3836924-3837004:1:exon
so has part: feature:3837628-3837864:1:exon
so has part: feature:3838155-3838274:1:exon
so has part: feature:3839794-3839969:1:exon
so has part: feature:3842523-3842743:1:exon
so has part: feature:3843839-3843981:1:exon
so has part: feature:3845005-3845138:1:exon
so has part: feature:3846404-3846606:1:exon
so has part: feature:3847340-3847567:1:exon
so has part: feature:3847671-3847901:1:exon
so has part: feature:3849588-3849800:1:exon
so has part: feature:3851364-3851424:1:exon
so has part: feature:3852944-3853042:1:exon
so has part: feature:3853907-3854077:1:exon
so has part: feature:3855495-3855718:1:exon

XP_048465856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815027-3815182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816750-3817415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3819446-3819614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3821261-3821484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3821836-3821953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3822377-3822549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3823765-3824199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3831280-3831440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3831855-3832013:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3832258-3832450:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3833775-3833953:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3836924-3837004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3837628-3837864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3838155-3838274:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3839794-3839969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3842523-3842743:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3843839-3843981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3845005-3845138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3846404-3846606:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3847340-3847567:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3847671-3847901:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3849588-3849800:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3851364-3851424:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3852944-3853042:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3853907-3854077:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3855495-3855718:1:exon

LOC109920768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109920768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis regulator and mRNA stability factor 1 isoform X5
translation: MDGNRKENSFCGKPVGWLNQADNDGSVSKPWLWKISNCFSTVEQILPTSSKTKNCMENNKPKLELKDFPPPSQHAIPRFFASAPPSDIQAFQQQQSTGTKVSCCPHCGNEASCSPHTPNGGGCIHSVNGGALEHTNAGTVTCQIGSRPTLHSSKSCKVAVTNDHLAGPYSENAVSGCQLQPSLSQHLSCCGNLFKQLQPFHSNVHKQHQTPMPQNYNASNCFSCMELSGGVSGHLEDRMSQAELPTRVCTNSLQFHTAPMFLKGSHCCDDCLNKPPRRPAVDVKKIWPNIAPPAQSVPVPISLCNGVQTEGQTAEAPTLTGNLGLQPPKFGSPDVGTVGQQENLPPIGVFWDIENCSVPTGRSAMTIVQRIRQQFFQGHREAEFMCVCDISKENKEVIQELNNCQVTVAHINATAKNAADDKLRQSLRRFADTHTAPSTVILVSSDVNFALELSDLRHRHGFQIILVHKNQVSDTLLQHAHKHFKFEEFVSNLPPRLPEKTPQCHTLLYAYNLPLNRDSKQVSNRLRRLSDNCGGKVLSITGSSAILRFTSQESAERAQKRMENEDVFGNKILVSFTPKNKDLCESKNNCFTVEKAKSPKKANKMTKLSQRNKGLDDQLPNSKNSTVKNLPTPQGSAIKDNNVRSLQELCGMESKAKQSVRTQKIKKQGTESPPVGNCTSTYSPVTAKNVGNGDSFSGNMKRETPSSRSSLESPIDKIEKKADFHVSSPSAFSKLSVSRHNTPPIPGHGTWATRSPSPSLSNRLCSVSANPANQTHYSDPHTGPFANGADVQVSNLDYRMSRKELQQILHEIFLRHGKVKNVELSPHTDYQLKATVQMGSLQEAILAVNNLHRYKIGSKRIQVSLATGSANKSLALLGSETISILQDAPACCLPLFKFTEIYEKRFGHKLFVSDLYKLTDTVAIRDQVNGRMVCLLPSSQTRQSPMGSVLSYDGSSSNCSPVIFEELEYHEPICKQHCSNNVYNENEFDPDSYKIPFIILSLKTFAPQVHSLLHTHEGTVPLLSFLDCYAAEFTVLKIVEEGQGGVPLEHLITCVPGVNIVTAQDGIKVVKWVQNKPPPPNVDPWLLRCKSPVGNPQLIQFSREVIDLLKSQAHCFICQNKFIPTYHHHFGKQCRVSDYGFSKLVELLEAVPHVLQILGLGAKRLLTLTHRAQVKRFTQDLLKLLKSQASKQVFIREFGQAYHWCFSKDWNVTDYGVCELADLLSEIPDTTICVSQQDDDTVISIPKRERTPEEIERTKQFAKEVVDLLRHQSHCRMPFNKFIPAYHHHFGRQCKLTYYGFNKLMELFEAIPDVLQICSTPKGKQLQLINRKSLRTVTAQLLVLLMSLDDVSCLTVDDLKKRFDATYGSPLVPSEYGFMSLTELLKSLPYLVEVFTDDTGEEYVKLTKVYQFAKNVRALLHTYHYQQIFLTEFPSTYHKYTGEVLQPKVYGYSSIEDLLIAIPQVIWIKGHGHKRIVVLKNDMKVRNSSACCSPACMVEECGQTQGDLKRPVTLAVQNSSSNETKELETDSSCSNQTEQELLCLGNQSPVDLLCGPVPSCLPSPQLRPDPVVLQNADLIRFEEQSPNVADMLILTEEEKTVLPAAMTEEAFTSGSITNQIKDNLPTTCQPEDEQEIKSPHLEVTASPVRKPRSKVKLAANFSLVPPINI
SIO_010081: LOC109920768
subclass of: SO_0000673
so part of: LOC109920768
location: join(3815027..3815182,3816750..3817415,3819446..3819614,3821261..3821484,3821836..3821953,3822377..3822549,3823765..3824199,3831280..3831440,3831855..3832013,3832258..3832450,3833775..3833953,3836924..3837004,3837628..3837864,3838155..3838274,3839794..3839969,3842523..3842743,3843839..3843981,3845005..3845138,3846404..3846606,3847671..3847901,3849588..3849800,3851364..3851424,3852899..3853042,3853907..3854077,3855477..3855718)
location: region:3815027-3855718:1
so has part: feature:3815027-3815182:1:exon
so has part: feature:3816750-3817415:1:exon
so has part: feature:3819446-3819614:1:exon
so has part: feature:3821261-3821484:1:exon
so has part: feature:3821836-3821953:1:exon
so has part: feature:3822377-3822549:1:exon
so has part: feature:3823765-3824199:1:exon
so has part: feature:3831280-3831440:1:exon
so has part: feature:3831855-3832013:1:exon
so has part: feature:3832258-3832450:1:exon
so has part: feature:3833775-3833953:1:exon
so has part: feature:3836924-3837004:1:exon
so has part: feature:3837628-3837864:1:exon
so has part: feature:3838155-3838274:1:exon
so has part: feature:3839794-3839969:1:exon
so has part: feature:3842523-3842743:1:exon
so has part: feature:3843839-3843981:1:exon
so has part: feature:3845005-3845138:1:exon
so has part: feature:3846404-3846606:1:exon
so has part: feature:3847671-3847901:1:exon
so has part: feature:3849588-3849800:1:exon
so has part: feature:3851364-3851424:1:exon
so has part: feature:3852899-3853042:1:exon
so has part: feature:3853907-3854077:1:exon
so has part: feature:3855477-3855718:1:exon

XP_048465858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815027-3815182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816750-3817415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3819446-3819614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3821261-3821484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3821836-3821953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3822377-3822549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3823765-3824199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3831280-3831440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3831855-3832013:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3832258-3832450:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3833775-3833953:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3836924-3837004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3837628-3837864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3838155-3838274:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3839794-3839969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3842523-3842743:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3843839-3843981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3845005-3845138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3846404-3846606:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3847671-3847901:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3849588-3849800:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3851364-3851424:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3852899-3853042:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3853907-3854077:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3855477-3855718:1:exon

LOC109918975
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109918975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3869022..3967979)
location: region:3869022-3967979:-1
so has part: feature:3869022-3967979:-1:exon
subclass of: SO_0000010

109918975
type: Gene
SIO_000068: ncbigene

position:3869022:-1
position: 3869022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3967979:-1
position: 3967979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3869022-3967979:-1:exon

LOC109918975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918975
product: MPV17 mitochondrial membrane protein like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609902.1
SIO_010081: LOC109918975
subclass of: SO_0000673
so part of: LOC109918975
location: complement(join(3869022..3870440,3871571..3871653,3873544..3873658,3895346..3895419,3911359..3911482,3967492..3967979))
location: region:3869022-3967979:-1
so has part: feature:3967492-3967979:-1:exon
so has part: feature:3911359-3911482:-1:exon
so has part: feature:3895346-3895419:-1:exon
so has part: feature:3873544-3873658:-1:exon
so has part: feature:3871571-3871653:-1:exon
so has part: feature:3869022-3870440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3967492-3967979:-1:exon

position:3967492:-1
position: 3967492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3911359-3911482:-1:exon

position:3911359:-1
position: 3911359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3911482:-1
position: 3911482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3895346-3895419:-1:exon

position:3895346:-1
position: 3895346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895419:-1
position: 3895419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3873544-3873658:-1:exon

position:3873544:-1
position: 3873544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3873658:-1
position: 3873658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3871571-3871653:-1:exon

position:3871571:-1
position: 3871571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3871653:-1
position: 3871653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3869022-3870440:-1:exon

position:3870440:-1
position: 3870440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109918975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918975
product: MPV17 mitochondrial membrane protein like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609903.1
SIO_010081: LOC109918975
subclass of: SO_0000673
so part of: LOC109918975
location: complement(join(3869022..3870440,3871571..3871653,3873544..3873658,3895346..3895419,3911359..3911482,3928438..3928625))
location: region:3869022-3928625:-1
so has part: feature:3928438-3928625:-1:exon
so has part: feature:3911359-3911482:-1:exon
so has part: feature:3895346-3895419:-1:exon
so has part: feature:3873544-3873658:-1:exon
so has part: feature:3871571-3871653:-1:exon
so has part: feature:3869022-3870440:-1:exon

position:3928625:-1
position: 3928625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3928438-3928625:-1:exon

position:3928438:-1
position: 3928438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3911359-3911482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3895346-3895419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3873544-3873658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3871571-3871653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3869022-3870440:-1:exon

LOC109918975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bMERB domain-containing protein 1 isoform X1
translation: MLKFLLAQVRRFPWVTNVVWYSCIFTAGDLAQQKLLKKEKVDLKQTRNVALLAFSFHGNLFYMWLKLMEHMFPGTAPSNVLRKVVCDQLVVTPTGISGFYIDQLDIVSMADLTMTPDEIEMEMVRIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQQLVSIPEKEKCTEDKQKEDVLIHKIQKLVQKRDFLVEDAEVERLREREEDKEMEEFLQSKLRPLKNLPKVPSESPTGKPVVPEPPAIKPSITKVGMALIRDCCGTTQCSVM
SIO_010081: LOC109918975
subclass of: SO_0000673
so part of: LOC109918975
location: complement(join(3870322..3870440,3871571..3871653,3873544..3873658,3895346..3895419,3911359..3911482,3967492..3967795))
location: region:3870322-3967795:-1
so has part: feature:3967492-3967795:-1:exon
so has part: feature:3911359-3911482:-1:exon
so has part: feature:3895346-3895419:-1:exon
so has part: feature:3873544-3873658:-1:exon
so has part: feature:3871571-3871653:-1:exon
so has part: feature:3870322-3870440:-1:exon

XP_048465859.1
type: Protein
SIO_000068: ncbiprotein

position:3870322:-1
position: 3870322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3967795:-1
position: 3967795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3967492-3967795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3911359-3911482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3895346-3895419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3873544-3873658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3871571-3871653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3870322-3870440:-1:exon

LOC109918975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bMERB domain-containing protein 1 isoform X2
translation: MELKSPTPGPLDIRRSLRSYGAVQETEWSRAAVGKDQLDIVSMADLTMTPDEIEMEMVRIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQQLVSIPEKEKCTEDKQKEDVLIHKIQKLVQKRDFLVEDAEVERLREREEDKEMEEFLQSKLRPLKNLPKVPSESPTGKPVVPEPPAIKPSITKVGMALIRDCCGTTQCSVM
SIO_010081: LOC109918975
subclass of: SO_0000673
so part of: LOC109918975
location: complement(join(3870322..3870440,3871571..3871653,3873544..3873658,3895346..3895419,3911359..3911482,3928438..3928543))
location: region:3870322-3928543:-1
so has part: feature:3928438-3928543:-1:exon
so has part: feature:3911359-3911482:-1:exon
so has part: feature:3895346-3895419:-1:exon
so has part: feature:3873544-3873658:-1:exon
so has part: feature:3871571-3871653:-1:exon
so has part: feature:3870322-3870440:-1:exon

XP_048465860.1
type: Protein
SIO_000068: ncbiprotein

position:3928543:-1
position: 3928543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3928438-3928543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3911359-3911482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3895346-3895419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3873544-3873658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3871571-3871653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3870322-3870440:-1:exon

pdxdc1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pdxdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3972549..4034588
location: region:3972549-4034588:1
so has part: feature:3972549-4034588:1:exon
subclass of: SO_0000010

109918974
type: Gene
SIO_000068: ncbigene

position:3972549:1
position: 3972549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4034588:1
position: 4034588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3972549-4034588:1:exon

pdxdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pdxdc1
product: pyridoxal-dependent decarboxylase domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 long SRA reads, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048609337.1
SIO_010081: pdxdc1
subclass of: SO_0000673
so part of: pdxdc1
location: join(3972549..3972739,3981449..3981522,3982108..3982176,3983041..3983121,3989048..3989194,3991887..3992076,3993440..3993508,3993989..3994067,3996948..3997032,3998357..3998405,3998783..3998884,3999198..3999323,4003706..4003756,4014091..4014154,4015301..4015392,4016201..4016306,4017527..4017698,4019416..4019534,4022984..4023105,4024309..4024401,4026935..4027031,4032732..4032836,4033666..4034588)
location: region:3972549-4034588:1
so has part: feature:3972549-3972739:1:exon
so has part: feature:3981449-3981522:1:exon
so has part: feature:3982108-3982176:1:exon
so has part: feature:3983041-3983121:1:exon
so has part: feature:3989048-3989194:1:exon
so has part: feature:3991887-3992076:1:exon
so has part: feature:3993440-3993508:1:exon
so has part: feature:3993989-3994067:1:exon
so has part: feature:3996948-3997032:1:exon
so has part: feature:3998357-3998405:1:exon
so has part: feature:3998783-3998884:1:exon
so has part: feature:3999198-3999323:1:exon
so has part: feature:4003706-4003756:1:exon
so has part: feature:4014091-4014154:1:exon
so has part: feature:4015301-4015392:1:exon
so has part: feature:4016201-4016306:1:exon
so has part: feature:4017527-4017698:1:exon
so has part: feature:4019416-4019534:1:exon
so has part: feature:4022984-4023105:1:exon
so has part: feature:4024309-4024401:1:exon
so has part: feature:4026935-4027031:1:exon
so has part: feature:4032732-4032836:1:exon
so has part: feature:4033666-4034588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3972549-3972739:1:exon

position:3972739:1
position: 3972739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3981449-3981522:1:exon

position:3981449:1
position: 3981449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3981522:1
position: 3981522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3982108-3982176:1:exon

position:3982108:1
position: 3982108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3982176:1
position: 3982176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3983041-3983121:1:exon

position:3983041:1
position: 3983041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3983121:1
position: 3983121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3989048-3989194:1:exon

position:3989048:1
position: 3989048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3989194:1
position: 3989194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3991887-3992076:1:exon

position:3991887:1
position: 3991887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3992076:1
position: 3992076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3993440-3993508:1:exon

position:3993440:1
position: 3993440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3993508:1
position: 3993508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3993989-3994067:1:exon

position:3993989:1
position: 3993989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3994067:1
position: 3994067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3996948-3997032:1:exon

position:3996948:1
position: 3996948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3997032:1
position: 3997032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3998357-3998405:1:exon

position:3998357:1
position: 3998357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3998405:1
position: 3998405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3998783-3998884:1:exon

position:3998783:1
position: 3998783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3998884:1
position: 3998884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3999198-3999323:1:exon

position:3999198:1
position: 3999198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3999323:1
position: 3999323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4003706-4003756:1:exon

position:4003706:1
position: 4003706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4003756:1
position: 4003756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4014091-4014154:1:exon

position:4014091:1
position: 4014091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4014154:1
position: 4014154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4015301-4015392:1:exon

position:4015301:1
position: 4015301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4015392:1
position: 4015392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4016201-4016306:1:exon

position:4016201:1
position: 4016201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4016306:1
position: 4016306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4017527-4017698:1:exon

position:4017527:1
position: 4017527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4017698:1
position: 4017698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4019416-4019534:1:exon

position:4019416:1
position: 4019416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4019534:1
position: 4019534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4022984-4023105:1:exon

position:4022984:1
position: 4022984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4023105:1
position: 4023105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4024309-4024401:1:exon

position:4024309:1
position: 4024309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4024401:1
position: 4024401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4026935-4027031:1:exon

position:4026935:1
position: 4026935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4027031:1
position: 4027031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4032732-4032836:1:exon

position:4032732:1
position: 4032732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4032836:1
position: 4032836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4033666-4034588:1:exon

position:4033666:1
position: 4033666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pdxdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pdxdc1
product: pyridoxal-dependent decarboxylase domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048609336.1
SIO_010081: pdxdc1
subclass of: SO_0000673
so part of: pdxdc1
location: join(3972552..3972739,3981449..3981522,3982108..3982176,3983041..3983121,3989045..3989194,3991887..3992076,3993440..3993508,3993989..3994067,3996948..3997032,3998357..3998405,3998783..3998884,3999198..3999323,4003706..4003756,4014091..4014154,4015301..4015392,4016201..4016306,4017527..4017698,4019416..4019534,4022984..4023105,4024309..4024401,4026935..4027031,4032732..4032836,4033666..4034588)
location: region:3972552-4034588:1
so has part: feature:3972552-3972739:1:exon
so has part: feature:3981449-3981522:1:exon
so has part: feature:3982108-3982176:1:exon
so has part: feature:3983041-3983121:1:exon
so has part: feature:3989045-3989194:1:exon
so has part: feature:3991887-3992076:1:exon
so has part: feature:3993440-3993508:1:exon
so has part: feature:3993989-3994067:1:exon
so has part: feature:3996948-3997032:1:exon
so has part: feature:3998357-3998405:1:exon
so has part: feature:3998783-3998884:1:exon
so has part: feature:3999198-3999323:1:exon
so has part: feature:4003706-4003756:1:exon
so has part: feature:4014091-4014154:1:exon
so has part: feature:4015301-4015392:1:exon
so has part: feature:4016201-4016306:1:exon
so has part: feature:4017527-4017698:1:exon
so has part: feature:4019416-4019534:1:exon
so has part: feature:4022984-4023105:1:exon
so has part: feature:4024309-4024401:1:exon
so has part: feature:4026935-4027031:1:exon
so has part: feature:4032732-4032836:1:exon
so has part: feature:4033666-4034588:1:exon

position:3972552:1
position: 3972552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3972552-3972739:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3981449-3981522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3982108-3982176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3983041-3983121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3989045-3989194:1:exon

position:3989045:1
position: 3989045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3991887-3992076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3993440-3993508:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3993989-3994067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3996948-3997032:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3998357-3998405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3998783-3998884:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3999198-3999323:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4003706-4003756:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4014091-4014154:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4015301-4015392:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4016201-4016306:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4017527-4017698:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4019416-4019534:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4022984-4023105:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4024309-4024401:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4026935-4027031:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4032732-4032836:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4033666-4034588:1:exon

pdxdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pdxdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X1
translation: MEMSLEKMVDPTLAEMGRNLNEAMRMLEDSQREAEEEREKKKYARKDIPGPLQGSGQNMTAILQLVQNLMHGEDEEESQSHRRLQNVGEQGHMSLLGHSLAAYISVLDKERLRKLTTRILSDTTLWLCRLFRYENGSAYYHEDDREGLLKVCKLIIHSNYEDYAIEGFNVLHNKSPVLYISAACRTGLGQYICNQLGLPISCMCSVPCNTMFGSQHQMDVALLESLIKDDMECGKLPVLLVANAGTPGAGHTDKLARLKELCNQYKMWLHVEGVNLAMLTLGYVSSSVLAATKCDSMTLTLGPWLGLPAVPAVTLYRHEDPSLSLAAGLTTSQPVEKLRALPLWLSLQYLGHDGIVNRIKYASQLSQRLLENLRKLSSIRTAVEDEFNSPVVVFRFIREHLKSALDGAQYQTATVQESTKDSNEREVDDALNRWLGEQLGQLVPTSGVDVVELEDEGVCIRFSPLMTAAVLNTTPEHVDQLAECLKAKIPILISTLQLREEFKQEVYRTAGLTCIEDLNWPGLGAVRYEANSEEPDPEKQLLEMEKITTGLLKKLKELDSDLIFSTGPEFEGEKNCIYVGMVTDNLDVPELVETIAAMGKEIEESSKLLENMTEVVRKGIIEAEQQLQKANEAKLLEEGLLRQIPVVGSVLNWLSPVHSSVQGRSFNLAGGSLESTDKLYTLKAQTSEGTPPSTPTIIHTKHKSPGQKLFRRSSRTSASDTVSETSMGHTEEMEESRSITETTRLESKIEIHQSPESSVQLNGDLEFPGHPQSDGTSNDVKVVHQPSEPAEAEGLEKEDLR
SIO_010081: pdxdc1
subclass of: SO_0000673
so part of: pdxdc1
location: join(3972719..3972739,3981449..3981522,3982108..3982176,3983041..3983121,3989045..3989194,3991887..3992076,3993440..3993508,3993989..3994067,3996948..3997032,3998357..3998405,3998783..3998884,3999198..3999323,4003706..4003756,4014091..4014154,4015301..4015392,4016201..4016306,4017527..4017698,4019416..4019534,4022984..4023105,4024309..4024401,4026935..4027031,4032732..4032836,4033666..4033955)
location: region:3972719-4033955:1
so has part: feature:3972719-3972739:1:exon
so has part: feature:3981449-3981522:1:exon
so has part: feature:3982108-3982176:1:exon
so has part: feature:3983041-3983121:1:exon
so has part: feature:3989045-3989194:1:exon
so has part: feature:3991887-3992076:1:exon
so has part: feature:3993440-3993508:1:exon
so has part: feature:3993989-3994067:1:exon
so has part: feature:3996948-3997032:1:exon
so has part: feature:3998357-3998405:1:exon
so has part: feature:3998783-3998884:1:exon
so has part: feature:3999198-3999323:1:exon
so has part: feature:4003706-4003756:1:exon
so has part: feature:4014091-4014154:1:exon
so has part: feature:4015301-4015392:1:exon
so has part: feature:4016201-4016306:1:exon
so has part: feature:4017527-4017698:1:exon
so has part: feature:4019416-4019534:1:exon
so has part: feature:4022984-4023105:1:exon
so has part: feature:4024309-4024401:1:exon
so has part: feature:4026935-4027031:1:exon
so has part: feature:4032732-4032836:1:exon
so has part: feature:4033666-4033955:1:exon

XP_048465293.1
type: Protein
SIO_000068: ncbiprotein

position:3972719:1
position: 3972719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4033955:1
position: 4033955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3972719-3972739:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3981449-3981522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3982108-3982176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3983041-3983121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3989045-3989194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3991887-3992076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3993440-3993508:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3993989-3994067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3996948-3997032:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3998357-3998405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3998783-3998884:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3999198-3999323:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4003706-4003756:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4014091-4014154:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4015301-4015392:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4016201-4016306:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4017527-4017698:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4019416-4019534:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4022984-4023105:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4024309-4024401:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4026935-4027031:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4032732-4032836:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4033666-4033955:1:exon

pdxdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pdxdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X2
translation: MEMSLEKMVDPTLAEMGRNLNEAMRMLEDSQREAEEEREKKKYARKDIPGPLQGSGQNMTAILQLVQNLMHGEDEEESQSHRLQNVGEQGHMSLLGHSLAAYISVLDKERLRKLTTRILSDTTLWLCRLFRYENGSAYYHEDDREGLLKVCKLIIHSNYEDYAIEGFNVLHNKSPVLYISAACRTGLGQYICNQLGLPISCMCSVPCNTMFGSQHQMDVALLESLIKDDMECGKLPVLLVANAGTPGAGHTDKLARLKELCNQYKMWLHVEGVNLAMLTLGYVSSSVLAATKCDSMTLTLGPWLGLPAVPAVTLYRHEDPSLSLAAGLTTSQPVEKLRALPLWLSLQYLGHDGIVNRIKYASQLSQRLLENLRKLSSIRTAVEDEFNSPVVVFRFIREHLKSALDGAQYQTATVQESTKDSNEREVDDALNRWLGEQLGQLVPTSGVDVVELEDEGVCIRFSPLMTAAVLNTTPEHVDQLAECLKAKIPILISTLQLREEFKQEVYRTAGLTCIEDLNWPGLGAVRYEANSEEPDPEKQLLEMEKITTGLLKKLKELDSDLIFSTGPEFEGEKNCIYVGMVTDNLDVPELVETIAAMGKEIEESSKLLENMTEVVRKGIIEAEQQLQKANEAKLLEEGLLRQIPVVGSVLNWLSPVHSSVQGRSFNLAGGSLESTDKLYTLKAQTSEGTPPSTPTIIHTKHKSPGQKLFRRSSRTSASDTVSETSMGHTEEMEESRSITETTRLESKIEIHQSPESSVQLNGDLEFPGHPQSDGTSNDVKVVHQPSEPAEAEGLEKEDLR
SIO_010081: pdxdc1
subclass of: SO_0000673
so part of: pdxdc1
location: join(3972719..3972739,3981449..3981522,3982108..3982176,3983041..3983121,3989048..3989194,3991887..3992076,3993440..3993508,3993989..3994067,3996948..3997032,3998357..3998405,3998783..3998884,3999198..3999323,4003706..4003756,4014091..4014154,4015301..4015392,4016201..4016306,4017527..4017698,4019416..4019534,4022984..4023105,4024309..4024401,4026935..4027031,4032732..4032836,4033666..4033955)
location: region:3972719-4033955:1
so has part: feature:3972719-3972739:1:exon
so has part: feature:3981449-3981522:1:exon
so has part: feature:3982108-3982176:1:exon
so has part: feature:3983041-3983121:1:exon
so has part: feature:3989048-3989194:1:exon
so has part: feature:3991887-3992076:1:exon
so has part: feature:3993440-3993508:1:exon
so has part: feature:3993989-3994067:1:exon
so has part: feature:3996948-3997032:1:exon
so has part: feature:3998357-3998405:1:exon
so has part: feature:3998783-3998884:1:exon
so has part: feature:3999198-3999323:1:exon
so has part: feature:4003706-4003756:1:exon
so has part: feature:4014091-4014154:1:exon
so has part: feature:4015301-4015392:1:exon
so has part: feature:4016201-4016306:1:exon
so has part: feature:4017527-4017698:1:exon
so has part: feature:4019416-4019534:1:exon
so has part: feature:4022984-4023105:1:exon
so has part: feature:4024309-4024401:1:exon
so has part: feature:4026935-4027031:1:exon
so has part: feature:4032732-4032836:1:exon
so has part: feature:4033666-4033955:1:exon

XP_048465294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3972719-3972739:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3981449-3981522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3982108-3982176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3983041-3983121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3989048-3989194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3991887-3992076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3993440-3993508:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3993989-3994067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3996948-3997032:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3998357-3998405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3998783-3998884:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3999198-3999323:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4003706-4003756:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4014091-4014154:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4015301-4015392:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4016201-4016306:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4017527-4017698:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4019416-4019534:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4022984-4023105:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4024309-4024401:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4026935-4027031:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4032732-4032836:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4033666-4033955:1:exon

ntan1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ntan1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4034632..4059152)
location: region:4034632-4059152:-1
so has part: feature:4034632-4059152:-1:exon
subclass of: SO_0000010

109936994
type: Gene
SIO_000068: ncbigene

position:4034632:-1
position: 4034632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059152:-1
position: 4059152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4034632-4059152:-1:exon

ntan1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ntan1
product: N-terminal asparagine amidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048609338.1
SIO_010081: ntan1
subclass of: SO_0000673
so part of: ntan1
location: complement(join(4034632..4034872,4035338..4035443,4035572..4035685,4035778..4035875,4036463..4036516,4037924..4037977,4045447..4045520,4047240..4047348,4050113..4050178,4051644..4051746,4058974..4059152))
location: region:4034632-4059152:-1
so has part: feature:4058974-4059152:-1:exon
so has part: feature:4051644-4051746:-1:exon
so has part: feature:4050113-4050178:-1:exon
so has part: feature:4047240-4047348:-1:exon
so has part: feature:4045447-4045520:-1:exon
so has part: feature:4037924-4037977:-1:exon
so has part: feature:4036463-4036516:-1:exon
so has part: feature:4035778-4035875:-1:exon
so has part: feature:4035572-4035685:-1:exon
so has part: feature:4035338-4035443:-1:exon
so has part: feature:4034632-4034872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4058974-4059152:-1:exon

position:4058974:-1
position: 4058974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4051644-4051746:-1:exon

position:4051644:-1
position: 4051644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4051746:-1
position: 4051746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4050113-4050178:-1:exon

position:4050113:-1
position: 4050113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4050178:-1
position: 4050178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4047240-4047348:-1:exon

position:4047240:-1
position: 4047240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4047348:-1
position: 4047348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4045447-4045520:-1:exon

position:4045447:-1
position: 4045447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4045520:-1
position: 4045520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4037924-4037977:-1:exon

position:4037924:-1
position: 4037924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4037977:-1
position: 4037977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4036463-4036516:-1:exon

position:4036463:-1
position: 4036463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4036516:-1
position: 4036516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4035778-4035875:-1:exon

position:4035778:-1
position: 4035778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4035875:-1
position: 4035875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4035572-4035685:-1:exon

position:4035572:-1
position: 4035572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4035685:-1
position: 4035685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4035338-4035443:-1:exon

position:4035338:-1
position: 4035338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4035443:-1
position: 4035443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4034632-4034872:-1:exon

position:4034872:-1
position: 4034872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ntan1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ntan1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein N-terminal asparagine amidohydrolase isoform X2
translation: MPLLVSNRPIQLPSSTGDFIERYSHLKEAAKSLQSKPVCKIDPKGLLYVHQREFATTTPRDGSVSILGTEDATTCHMVVLRHTGSGATSLGHCDGADTELTVSLMFNAVKSLSVGCDSGRYEVHLVGGFIDERSLSHRLTLELLEALNCQSENIHLETYCLTELNDVVKQNIHWPVIYGIAVNVKTGDIFHATFPDRGPDEVIRAARTFLGGSIMSIYNAKEEQLQIDPYQWKQFTAAQFWLQQTDQVILQNFSTSPLVEPSHFVTQERSVFRFLSRYPEEPLFPKEQVYYFVVFKEWLM
SIO_010081: ntan1
subclass of: SO_0000673
so part of: ntan1
location: complement(join(4034829..4034872,4035338..4035443,4035572..4035685,4035778..4035875,4036463..4036516,4037924..4037977,4045447..4045520,4047240..4047348,4050113..4050178,4051644..4051746,4058974..4059054))
location: region:4034829-4059054:-1
so has part: feature:4058974-4059054:-1:exon
so has part: feature:4051644-4051746:-1:exon
so has part: feature:4050113-4050178:-1:exon
so has part: feature:4047240-4047348:-1:exon
so has part: feature:4045447-4045520:-1:exon
so has part: feature:4037924-4037977:-1:exon
so has part: feature:4036463-4036516:-1:exon
so has part: feature:4035778-4035875:-1:exon
so has part: feature:4035572-4035685:-1:exon
so has part: feature:4035338-4035443:-1:exon
so has part: feature:4034829-4034872:-1:exon

XP_048465295.1
type: Protein
SIO_000068: ncbiprotein

position:4034829:-1
position: 4034829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059054:-1
position: 4059054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4058974-4059054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4051644-4051746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4050113-4050178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4047240-4047348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045447-4045520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4037924-4037977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4036463-4036516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4035778-4035875:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4035572-4035685:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4035338-4035443:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4034829-4034872:-1:exon

ntan1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ntan1
product: N-terminal asparagine amidase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020535610.2
SIO_010081: ntan1
subclass of: SO_0000673
so part of: ntan1
location: complement(join(4034890..4035443,4035572..4035685,4035778..4035875,4036463..4036516,4037924..4037977,4045447..4045520,4047240..4047348,4050113..4050178,4051644..4051746,4058974..4059142))
location: region:4034890-4059142:-1
so has part: feature:4058974-4059142:-1:exon
so has part: feature:4051644-4051746:-1:exon
so has part: feature:4050113-4050178:-1:exon
so has part: feature:4047240-4047348:-1:exon
so has part: feature:4045447-4045520:-1:exon
so has part: feature:4037924-4037977:-1:exon
so has part: feature:4036463-4036516:-1:exon
so has part: feature:4035778-4035875:-1:exon
so has part: feature:4035572-4035685:-1:exon
so has part: feature:4034890-4035443:-1:exon

position:4034890:-1
position: 4034890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059142:-1
position: 4059142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4058974-4059142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4051644-4051746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4050113-4050178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4047240-4047348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045447-4045520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4037924-4037977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4036463-4036516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4035778-4035875:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4035572-4035685:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4034890-4035443:-1:exon

ntan1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ntan1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein N-terminal asparagine amidohydrolase isoform X1
translation: MPLLVSNRPIQLPSSTGDFIERYSHLKEAAKSLQSKPVCKIDPKGLLYVHQREFATTTPRDGSVSILGTEDATTCHMVVLRHTGSGATSLGHCDGADTELTVSLMFNAVKSLSVGCDSGRYEVHLVGGFIDERSLSHRLTLELLEALNCQSENIHLETYCLTELNDVVKQNIHWPVIYGIAVNVKTGDIFHATFPDRGPDEVIRAARTFLGGSIMSIYNAKEEQLQIDPYQWKQFTAAQFWLQQTDQVILQNFSTSPLVEPSHFVTQERSVFRFLSRYPEEPLFPKGRSRIYKKTSDGLWERIDCAA
SIO_010081: ntan1
subclass of: SO_0000673
so part of: ntan1
location: complement(join(4035273..4035443,4035572..4035685,4035778..4035875,4036463..4036516,4037924..4037977,4045447..4045520,4047240..4047348,4050113..4050178,4051644..4051746,4058974..4059054))
location: region:4035273-4059054:-1
so has part: feature:4058974-4059054:-1:exon
so has part: feature:4051644-4051746:-1:exon
so has part: feature:4050113-4050178:-1:exon
so has part: feature:4047240-4047348:-1:exon
so has part: feature:4045447-4045520:-1:exon
so has part: feature:4037924-4037977:-1:exon
so has part: feature:4036463-4036516:-1:exon
so has part: feature:4035778-4035875:-1:exon
so has part: feature:4035572-4035685:-1:exon
so has part: feature:4035273-4035443:-1:exon

XP_020391199.2
type: Protein
SIO_000068: ncbiprotein

position:4035273:-1
position: 4035273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4058974-4059054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4051644-4051746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4050113-4050178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4047240-4047348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045447-4045520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4037924-4037977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4036463-4036516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4035778-4035875:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4035572-4035685:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4035273-4035443:-1:exon

rrn3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: rrn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4061573..4100170)
location: region:4061573-4100170:-1
so has part: feature:4061573-4100170:-1:exon
subclass of: SO_0000010

109923701
type: Gene
SIO_000068: ncbigene

position:4061573:-1
position: 4061573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100170:-1
position: 4100170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4061573-4100170:-1:exon

rrn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rrn3
product: RRN3 homolog, RNA polymerase I transcription factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609510.1
SIO_010081: rrn3
subclass of: SO_0000673
so part of: rrn3
location: complement(join(4061573..4062457,4067358..4067445,4068082..4068234,4071459..4071567,4075057..4075241,4076004..4076134,4078381..4078511,4082882..4083014,4083880..4083978,4086037..4086135,4091320..4091389,4094452..4094515,4096490..4096549,4097528..4097657,4097889..4097978,4099759..4099815,4099914..4100020,4100098..4100170))
location: region:4061573-4100170:-1
so has part: feature:4100098-4100170:-1:exon
so has part: feature:4099914-4100020:-1:exon
so has part: feature:4099759-4099815:-1:exon
so has part: feature:4097889-4097978:-1:exon
so has part: feature:4097528-4097657:-1:exon
so has part: feature:4096490-4096549:-1:exon
so has part: feature:4094452-4094515:-1:exon
so has part: feature:4091320-4091389:-1:exon
so has part: feature:4086037-4086135:-1:exon
so has part: feature:4083880-4083978:-1:exon
so has part: feature:4082882-4083014:-1:exon
so has part: feature:4078381-4078511:-1:exon
so has part: feature:4076004-4076134:-1:exon
so has part: feature:4075057-4075241:-1:exon
so has part: feature:4071459-4071567:-1:exon
so has part: feature:4068082-4068234:-1:exon
so has part: feature:4067358-4067445:-1:exon
so has part: feature:4061573-4062457:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4100098-4100170:-1:exon

position:4100098:-1
position: 4100098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4099914-4100020:-1:exon

position:4099914:-1
position: 4099914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100020:-1
position: 4100020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4099759-4099815:-1:exon

position:4099759:-1
position: 4099759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4099815:-1
position: 4099815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4097889-4097978:-1:exon

position:4097889:-1
position: 4097889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097978:-1
position: 4097978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4097528-4097657:-1:exon

position:4097528:-1
position: 4097528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097657:-1
position: 4097657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4096490-4096549:-1:exon

position:4096490:-1
position: 4096490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4096549:-1
position: 4096549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4094452-4094515:-1:exon

position:4094452:-1
position: 4094452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4094515:-1
position: 4094515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4091320-4091389:-1:exon

position:4091320:-1
position: 4091320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4091389:-1
position: 4091389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4086037-4086135:-1:exon

position:4086037:-1
position: 4086037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4086135:-1
position: 4086135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4083880-4083978:-1:exon

position:4083880:-1
position: 4083880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4083978:-1
position: 4083978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4082882-4083014:-1:exon

position:4082882:-1
position: 4082882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4083014:-1
position: 4083014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4078381-4078511:-1:exon

position:4078381:-1
position: 4078381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4078511:-1
position: 4078511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4076004-4076134:-1:exon

position:4076004:-1
position: 4076004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4076134:-1
position: 4076134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4075057-4075241:-1:exon

position:4075057:-1
position: 4075057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4075241:-1
position: 4075241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4071459-4071567:-1:exon

position:4071459:-1
position: 4071459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4071567:-1
position: 4071567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4068082-4068234:-1:exon

position:4068082:-1
position: 4068082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4068234:-1
position: 4068234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4067358-4067445:-1:exon

position:4067358:-1
position: 4067358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4067445:-1
position: 4067445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4061573-4062457:-1:exon

position:4062457:-1
position: 4062457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rrn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rrn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase I-specific transcription initiation factor RRN3
translation: MDFVKEELAEGSSLDSFEDGFHLTMLGESEFFSSPPRKAVRFGGTVTEILKKYKQGDTVDYDLLMTQLDDPEIKDAQIINWLQEFRDAVAQLTKDFEHVVSKILKLPWLSRSPVVIEEYLAFLSNLVSAQTVYLRSCLSMLVSSFVPGRIVVQENGVDISDSEDEDENLPRNFDICHRALQIIAKYVPSTPQFLMPILVEKFPFANKSARILECYVHNLLRITVYFPVLRLKILELVVEKFLKLDVSASRNDIEDAEEAVAEAKNGLSTCAEEGLFDMDEDEGKRKIHLSLPNDEMAHPVAERLDILMSVLLAYIKDICYDNGELALTRTKELYRDLIVVFDKLVLPTHASCHVQYFMFYICSFKLGLAEAFLEHLWKMMQNPNNPAIIRQAAAGYIGSFLARATYIPVLTVKTCFDLLVPWIHDYLDNQDAGTKAYCDVALHGPFYSACQAVFYIFIFRYKQILDRNLKKGLAYLQNLNFERIVMCQLNPLKVCLPSVVNLFAAITRKFQLAFCYTVIERNNRQLIPVVRSSTGGDLIQICTNPLDSFFPFDPYILKRSKKIFDGIYRVWEDLSLQDIQVPQKITKLETAEDEEDDFLKGESLQNETIGITPSSLESHMHSPSSVGSPLAVFPLHHF
SIO_010081: rrn3
subclass of: SO_0000673
so part of: rrn3
location: complement(join(4062305..4062457,4067358..4067445,4068082..4068234,4071459..4071567,4075057..4075241,4076004..4076134,4078381..4078511,4082882..4083014,4083880..4083978,4086037..4086135,4091320..4091389,4094452..4094515,4096490..4096549,4097528..4097657,4097889..4097978,4099759..4099815,4099914..4100020,4100098..4100155))
location: region:4062305-4100155:-1
so has part: feature:4100098-4100155:-1:exon
so has part: feature:4099914-4100020:-1:exon
so has part: feature:4099759-4099815:-1:exon
so has part: feature:4097889-4097978:-1:exon
so has part: feature:4097528-4097657:-1:exon
so has part: feature:4096490-4096549:-1:exon
so has part: feature:4094452-4094515:-1:exon
so has part: feature:4091320-4091389:-1:exon
so has part: feature:4086037-4086135:-1:exon
so has part: feature:4083880-4083978:-1:exon
so has part: feature:4082882-4083014:-1:exon
so has part: feature:4078381-4078511:-1:exon
so has part: feature:4076004-4076134:-1:exon
so has part: feature:4075057-4075241:-1:exon
so has part: feature:4071459-4071567:-1:exon
so has part: feature:4068082-4068234:-1:exon
so has part: feature:4067358-4067445:-1:exon
so has part: feature:4062305-4062457:-1:exon

XP_048465467.1
type: Protein
SIO_000068: ncbiprotein

position:4062305:-1
position: 4062305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100155:-1
position: 4100155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4100098-4100155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4099914-4100020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4099759-4099815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4097889-4097978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097528-4097657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096490-4096549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4094452-4094515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4091320-4091389:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4086037-4086135:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4083880-4083978:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4082882-4083014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4078381-4078511:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4076004-4076134:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4075057-4075241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4071459-4071567:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4068082-4068234:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4067358-4067445:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4062305-4062457:-1:exon

si:dkeyp-72e1.6
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: si:dkeyp-72e1.6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4125848..4144529)
location: region:4125848-4144529:-1
so has part: feature:4125848-4144529:-1:exon
subclass of: SO_0000010

109921888
type: Gene
SIO_000068: ncbigene

position:4125848:-1
position: 4125848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4144529:-1
position: 4144529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4125848-4144529:-1:exon

si:dkeyp-72e1.6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: si:dkeyp-72e1.6
product: transmembrane protein 238-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609260.1
SIO_010081: si:dkeyp-72e1.6
subclass of: SO_0000673
so part of: si:dkeyp-72e1.6
location: complement(join(4125848..4126163,4143975..4144529))
location: region:4125848-4144529:-1
so has part: feature:4143975-4144529:-1:exon
so has part: feature:4125848-4126163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4143975-4144529:-1:exon

position:4143975:-1
position: 4143975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4125848-4126163:-1:exon

position:4126163:-1
position: 4126163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:dkeyp-72e1.6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: si:dkeyp-72e1.6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 238-like
translation: MALLQAALGRCACAFWLAVAFDAVGLTVLLIGVFANIFFYDFLIYAGSIVIFLSLIWWIFWYTGNIEVPQHQLEDDVGLKDRMGFFHRWSSRISTSLRRVSRRSASMSRSRSSGHRPSNLTEEPVKTLSESVNAALNPEQRESTADTANTPL
SIO_010081: si:dkeyp-72e1.6
subclass of: SO_0000673
so part of: si:dkeyp-72e1.6
location: complement(4143981..4144439)
location: region:4143981-4144439:-1
so has part: feature:4143981-4144439:-1:exon

XP_048465217.1
type: Protein
SIO_000068: ncbiprotein

position:4143981:-1
position: 4143981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4144439:-1
position: 4144439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4143981-4144439:-1:exon

rsl1d1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: rsl1d1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4179317..4202530)
location: region:4179317-4202530:-1
so has part: feature:4179317-4202530:-1:exon
subclass of: SO_0000010

109921889
type: Gene
SIO_000068: ncbigene

position:4179317:-1
position: 4179317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4202530:-1
position: 4202530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4179317-4202530:-1:exon

rsl1d1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rsl1d1
product: ribosomal L1 domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020521931.2
SIO_010081: rsl1d1
subclass of: SO_0000673
so part of: rsl1d1
location: complement(join(4179317..4180943,4182265..4182456,4188347..4188472,4190792..4190885,4193068..4193169,4195283..4195431,4196223..4196361,4198115..4198254,4202399..4202530))
location: region:4179317-4202530:-1
so has part: feature:4202399-4202530:-1:exon
so has part: feature:4198115-4198254:-1:exon
so has part: feature:4196223-4196361:-1:exon
so has part: feature:4195283-4195431:-1:exon
so has part: feature:4193068-4193169:-1:exon
so has part: feature:4190792-4190885:-1:exon
so has part: feature:4188347-4188472:-1:exon
so has part: feature:4182265-4182456:-1:exon
so has part: feature:4179317-4180943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4202399-4202530:-1:exon

position:4202399:-1
position: 4202399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4198115-4198254:-1:exon

position:4198115:-1
position: 4198115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4198254:-1
position: 4198254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4196223-4196361:-1:exon

position:4196223:-1
position: 4196223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4196361:-1
position: 4196361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4195283-4195431:-1:exon

position:4195283:-1
position: 4195283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4195431:-1
position: 4195431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4193068-4193169:-1:exon

position:4193068:-1
position: 4193068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4193169:-1
position: 4193169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4190792-4190885:-1:exon

position:4190792:-1
position: 4190792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190885:-1
position: 4190885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4188347-4188472:-1:exon

position:4188347:-1
position: 4188347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188472:-1
position: 4188472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4182265-4182456:-1:exon

position:4182265:-1
position: 4182265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4182456:-1
position: 4182456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4179317-4180943:-1:exon

position:4180943:-1
position: 4180943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rsl1d1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rsl1d1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal L1 domain-containing protein 1
translation: MAALDSEQVAKAVKALQAYVKKSRKDAELFLNENENIMLNVTVWKIPNQEQTIKINLPHGIRSESMEVCLFTKDEPNMTADQTERFYKKLLSKHGIKNITQVIPYKTLKTEYKPYEAKRRLLSSFDLFLADDRIRRLLPSHLGKHFYSSKKAPQSVKLTSKKLAKDLNKLIQGTTLFVNKKGSCYASRVAHTGMKSQEAVENVTAAVHVIAQKLPMQWKNVKVLHLKTPASVALPIYASGMQNLQDLQESLPKAVNKQKKQRKIKVLNSKNPSTAVSRLLKTVAKKSKKSKPSIANKHATEEEIPQLVPIEEQTVTKKAKLQELNGENHTIPNRVNGSKKPVGKKQQKLKHKERQKAPKQNSESQGLQTLPS
SIO_010081: rsl1d1
subclass of: SO_0000673
so part of: rsl1d1
location: complement(join(4180791..4180943,4182265..4182456,4188347..4188472,4190792..4190885,4193068..4193169,4195283..4195431,4196223..4196361,4198115..4198254,4202399..4202422))
location: region:4180791-4202422:-1
so has part: feature:4202399-4202422:-1:exon
so has part: feature:4198115-4198254:-1:exon
so has part: feature:4196223-4196361:-1:exon
so has part: feature:4195283-4195431:-1:exon
so has part: feature:4193068-4193169:-1:exon
so has part: feature:4190792-4190885:-1:exon
so has part: feature:4188347-4188472:-1:exon
so has part: feature:4182265-4182456:-1:exon
so has part: feature:4180791-4180943:-1:exon

XP_020377520.1
type: Protein
SIO_000068: ncbiprotein

position:4180791:-1
position: 4180791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4202422:-1
position: 4202422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4202399-4202422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4198115-4198254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4196223-4196361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4195283-4195431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4193068-4193169:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4190792-4190885:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4188347-4188472:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4182265-4182456:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4180791-4180943:-1:exon

gspt1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: gspt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4214445..4263153)
location: region:4214445-4263153:-1
so has part: feature:4214445-4263153:-1:exon
subclass of: SO_0000010

109919939
type: Gene
SIO_000068: ncbigene

position:4214445:-1
position: 4214445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4263153:-1
position: 4263153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4214445-4263153:-1:exon

gspt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gspt1
product: G1 to S phase transition 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020519970.2
SIO_010081: gspt1
subclass of: SO_0000673
so part of: gspt1
location: complement(join(4214445..4217897,4219734..4219902,4221622..4221711,4223157..4223330,4224737..4224817,4225937..4226030,4228239..4228379,4233601..4233755,4234489..4234669,4236118..4236195,4237250..4237283,4237484..4237717,4238178..4238222,4262646..4263153))
location: region:4214445-4263153:-1
so has part: feature:4262646-4263153:-1:exon
so has part: feature:4238178-4238222:-1:exon
so has part: feature:4237484-4237717:-1:exon
so has part: feature:4237250-4237283:-1:exon
so has part: feature:4236118-4236195:-1:exon
so has part: feature:4234489-4234669:-1:exon
so has part: feature:4233601-4233755:-1:exon
so has part: feature:4228239-4228379:-1:exon
so has part: feature:4225937-4226030:-1:exon
so has part: feature:4224737-4224817:-1:exon
so has part: feature:4223157-4223330:-1:exon
so has part: feature:4221622-4221711:-1:exon
so has part: feature:4219734-4219902:-1:exon
so has part: feature:4214445-4217897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4262646-4263153:-1:exon

position:4262646:-1
position: 4262646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4238178-4238222:-1:exon

position:4238178:-1
position: 4238178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4238222:-1
position: 4238222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4237484-4237717:-1:exon

position:4237484:-1
position: 4237484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4237717:-1
position: 4237717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4237250-4237283:-1:exon

position:4237250:-1
position: 4237250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4237283:-1
position: 4237283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4236118-4236195:-1:exon

position:4236118:-1
position: 4236118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4236195:-1
position: 4236195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4234489-4234669:-1:exon

position:4234489:-1
position: 4234489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4234669:-1
position: 4234669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4233601-4233755:-1:exon

position:4233601:-1
position: 4233601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4233755:-1
position: 4233755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4228239-4228379:-1:exon

position:4228239:-1
position: 4228239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4228379:-1
position: 4228379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4225937-4226030:-1:exon

position:4225937:-1
position: 4225937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4226030:-1
position: 4226030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4224737-4224817:-1:exon

position:4224737:-1
position: 4224737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4224817:-1
position: 4224817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4223157-4223330:-1:exon

position:4223157:-1
position: 4223157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4223330:-1
position: 4223330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4221622-4221711:-1:exon

position:4221622:-1
position: 4221622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4221711:-1
position: 4221711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4219734-4219902:-1:exon

position:4219734:-1
position: 4219734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4219902:-1
position: 4219902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4214445-4217897:-1:exon

position:4217897:-1
position: 4217897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gspt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gspt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic peptide chain release factor GTP-binding subunit ERF3A
translation: MDSKDVADYAPDSWELAADTDVEAQMNSSFSRLNVNAKPFVPNVHAAEFVPSFLRSSDEVGETLEGPDATDASMEISEPTAPVENGDTEAGSEESWEQKAEPSEAEPGGGPAGDGGPPLVTPVGMEEDEDVSMPTVAVVVEPGAPRKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETQKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVAWSQDRYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKERAENCSWYTGLPFIPYLDNLPHFYRASTGPVRVPIVDKYKDMGTVVLGKLESGLIGKGHQLVMMPNKHNVEVLGLLSDDVETETADPGENLKIRLKGIEEEEILPGFILCDHGSLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQIAALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLIPEKD
SIO_010081: gspt1
subclass of: SO_0000673
so part of: gspt1
location: complement(join(4217845..4217897,4219734..4219902,4221622..4221711,4223157..4223330,4224737..4224817,4225937..4226030,4228239..4228379,4233601..4233755,4234489..4234669,4236118..4236195,4237250..4237283,4237484..4237717,4238178..4238222,4262646..4262841))
location: region:4217845-4262841:-1
so has part: feature:4262646-4262841:-1:exon
so has part: feature:4238178-4238222:-1:exon
so has part: feature:4237484-4237717:-1:exon
so has part: feature:4237250-4237283:-1:exon
so has part: feature:4236118-4236195:-1:exon
so has part: feature:4234489-4234669:-1:exon
so has part: feature:4233601-4233755:-1:exon
so has part: feature:4228239-4228379:-1:exon
so has part: feature:4225937-4226030:-1:exon
so has part: feature:4224737-4224817:-1:exon
so has part: feature:4223157-4223330:-1:exon
so has part: feature:4221622-4221711:-1:exon
so has part: feature:4219734-4219902:-1:exon
so has part: feature:4217845-4217897:-1:exon

XP_020375559.2
type: Protein
SIO_000068: ncbiprotein

position:4217845:-1
position: 4217845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4262841:-1
position: 4262841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4262646-4262841:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4238178-4238222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4237484-4237717:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4237250-4237283:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4236118-4236195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4234489-4234669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4233601-4233755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4228239-4228379:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4225937-4226030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4224737-4224817:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4223157-4223330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4221622-4221711:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4219734-4219902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4217845-4217897:-1:exon

LOC125485705
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4297278..4352538
location: region:4297278-4352538:1
so has part: feature:4297278-4352538:1:exon
subclass of: SO_0000010

125485705
type: Gene
SIO_000068: ncbigene

position:4297278:1
position: 4297278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4352538:1
position: 4352538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4297278-4352538:1:exon

LOC125485705
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485705
product: tumor necrosis factor receptor superfamily member 17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048609839.1
SIO_010081: LOC125485705
subclass of: SO_0000673
so part of: LOC125485705
location: join(4297278..4297591,4332884..4333045,4339639..4339916,4352145..4352538)
location: region:4297278-4352538:1
so has part: feature:4297278-4297591:1:exon
so has part: feature:4332884-4333045:1:exon
so has part: feature:4339639-4339916:1:exon
so has part: feature:4352145-4352538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4297278-4297591:1:exon

position:4297591:1
position: 4297591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4332884-4333045:1:exon

position:4332884:1
position: 4332884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4333045:1
position: 4333045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4339639-4339916:1:exon

position:4339639:1
position: 4339639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4339916:1
position: 4339916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4352145-4352538:1:exon

position:4352145:1
position: 4352145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125485705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 17-like
translation: MAPACSKSFYYDELIGACEPCKLRCNNLQTRPSVCQDDICLEIPESSMSIWSNETIRNSWVIIGLFPLLLTVLFVFAFVLRKLHQRKSSTLFKSTEVTFDSNAIASGFKEHTLAKDAQRFSPERNQQSEQCVESEVTNCTSQGNEMKMLVAGTQENCDCDASLPLPATEEGATILVTTKTVEWCG
SIO_010081: LOC125485705
subclass of: SO_0000673
so part of: LOC125485705
location: join(4297468..4297591,4332884..4333045,4339639..4339910)
location: region:4297468-4339910:1
so has part: feature:4297468-4297591:1:exon
so has part: feature:4332884-4333045:1:exon
so has part: feature:4339639-4339910:1:exon

XP_048465796.1
type: Protein
SIO_000068: ncbiprotein

position:4297468:1
position: 4297468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4339910:1
position: 4339910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4297468-4297591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4332884-4333045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4339639-4339910:1:exon

snx29
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: snx29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4355802..4751987
location: region:4355802-4751987:1
so has part: feature:4355802-4751987:1:exon
subclass of: SO_0000010

109926997
type: Gene
SIO_000068: ncbigene

position:4355802:1
position: 4355802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4751987:1
position: 4751987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355802-4751987:1:exon

snx29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: snx29
product: sorting nexin 29, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609502.1
SIO_010081: snx29
subclass of: SO_0000673
so part of: snx29
location: join(4355802..4355918,4401718..4401782,4405424..4405476,4408021..4408145,4426633..4426813,4428145..4428215,4434768..4435016,4437728..4437832,4441676..4442111,4447786..4447910,4448993..4449086,4449274..4449356,4514625..4514731,4589910..4590026,4614607..4614662,4689671..4689811,4712330..4712469,4749121..4751987)
location: region:4355802-4751987:1
so has part: feature:4355802-4355918:1:exon
so has part: feature:4401718-4401782:1:exon
so has part: feature:4405424-4405476:1:exon
so has part: feature:4408021-4408145:1:exon
so has part: feature:4426633-4426813:1:exon
so has part: feature:4428145-4428215:1:exon
so has part: feature:4434768-4435016:1:exon
so has part: feature:4437728-4437832:1:exon
so has part: feature:4441676-4442111:1:exon
so has part: feature:4447786-4447910:1:exon
so has part: feature:4448993-4449086:1:exon
so has part: feature:4449274-4449356:1:exon
so has part: feature:4514625-4514731:1:exon
so has part: feature:4589910-4590026:1:exon
so has part: feature:4614607-4614662:1:exon
so has part: feature:4689671-4689811:1:exon
so has part: feature:4712330-4712469:1:exon
so has part: feature:4749121-4751987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4355802-4355918:1:exon

position:4355918:1
position: 4355918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4401718-4401782:1:exon

position:4401718:1
position: 4401718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4401782:1
position: 4401782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4405424-4405476:1:exon

position:4405424:1
position: 4405424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4405476:1
position: 4405476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4408021-4408145:1:exon

position:4408021:1
position: 4408021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4408145:1
position: 4408145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4426633-4426813:1:exon

position:4426633:1
position: 4426633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4426813:1
position: 4426813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4428145-4428215:1:exon

position:4428145:1
position: 4428145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4428215:1
position: 4428215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4434768-4435016:1:exon

position:4434768:1
position: 4434768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4435016:1
position: 4435016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4437728-4437832:1:exon

position:4437728:1
position: 4437728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4437832:1
position: 4437832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4441676-4442111:1:exon

position:4441676:1
position: 4441676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4442111:1
position: 4442111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4447786-4447910:1:exon

position:4447786:1
position: 4447786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4447910:1
position: 4447910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4448993-4449086:1:exon

position:4448993:1
position: 4448993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4449086:1
position: 4449086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4449274-4449356:1:exon

position:4449274:1
position: 4449274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4449356:1
position: 4449356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4514625-4514731:1:exon

position:4514625:1
position: 4514625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4514731:1
position: 4514731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4589910-4590026:1:exon

position:4589910:1
position: 4589910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4590026:1
position: 4590026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4614607-4614662:1:exon

position:4614607:1
position: 4614607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4614662:1
position: 4614662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4689671-4689811:1:exon

position:4689671:1
position: 4689671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4689811:1
position: 4689811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4712330-4712469:1:exon

position:4712330:1
position: 4712330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4712469:1
position: 4712469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4749121-4751987:1:exon

position:4749121:1
position: 4749121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

snx29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: snx29
product: sorting nexin 29, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048609503.1
SIO_010081: snx29
subclass of: SO_0000673
so part of: snx29
location: join(4355802..4355918,4401718..4401782,4405424..4405476,4408021..4408145,4426633..4426813,4428145..4428215,4434768..4435016,4437728..4437832,4441676..4442111,4447786..4447910,4448993..4449086,4449274..4449356,4514625..4514731,4520414..4520630)
location: region:4355802-4520630:1
so has part: feature:4355802-4355918:1:exon
so has part: feature:4401718-4401782:1:exon
so has part: feature:4405424-4405476:1:exon
so has part: feature:4408021-4408145:1:exon
so has part: feature:4426633-4426813:1:exon
so has part: feature:4428145-4428215:1:exon
so has part: feature:4434768-4435016:1:exon
so has part: feature:4437728-4437832:1:exon
so has part: feature:4441676-4442111:1:exon
so has part: feature:4447786-4447910:1:exon
so has part: feature:4448993-4449086:1:exon
so has part: feature:4449274-4449356:1:exon
so has part: feature:4514625-4514731:1:exon
so has part: feature:4520414-4520630:1:exon

position:4520630:1
position: 4520630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355802-4355918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4401718-4401782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4405424-4405476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4408021-4408145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4426633-4426813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4428145-4428215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4434768-4435016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4437728-4437832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4441676-4442111:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4447786-4447910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4448993-4449086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4449274-4449356:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4514625-4514731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4520414-4520630:1:exon

position:4520414:1
position: 4520414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

snx29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: snx29
product: sorting nexin 29, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048609504.1
SIO_010081: snx29
subclass of: SO_0000673
so part of: snx29
location: join(4355802..4355918,4401718..4401782,4405424..4405476,4408021..4408145,4426633..4426813,4428145..4428215,4434768..4435016,4437728..4437832,4441676..4442111,4447786..4447910,4448993..4449086,4449274..4449356,4465103..4465180)
location: region:4355802-4465180:1
so has part: feature:4355802-4355918:1:exon
so has part: feature:4401718-4401782:1:exon
so has part: feature:4405424-4405476:1:exon
so has part: feature:4408021-4408145:1:exon
so has part: feature:4426633-4426813:1:exon
so has part: feature:4428145-4428215:1:exon
so has part: feature:4434768-4435016:1:exon
so has part: feature:4437728-4437832:1:exon
so has part: feature:4441676-4442111:1:exon
so has part: feature:4447786-4447910:1:exon
so has part: feature:4448993-4449086:1:exon
so has part: feature:4449274-4449356:1:exon
so has part: feature:4465103-4465180:1:exon

position:4465180:1
position: 4465180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355802-4355918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4401718-4401782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4405424-4405476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4408021-4408145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4426633-4426813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4428145-4428215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4434768-4435016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4437728-4437832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4441676-4442111:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4447786-4447910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4448993-4449086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4449274-4449356:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4465103-4465180:1:exon

position:4465103:1
position: 4465103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

snx29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: snx29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-29 isoform X1
translation: MAGNMSVFQQNDCRRQSLLERLLDAVKQCQIRFGGRKEIASDTDSRVICLCAQFETVLQHGLRRSRGLALTAAAIKQAAGFANKTETDPVFWYYVKEHLNKHELQRYYSLKNITTDIGRGRAWLRSALNEHSLERYMHMLLADANLLSIFYEDWSFMREEERASMLPTMAAGLNSILFAINIDNEDLNGPNKPVSAVANLLKESTQNVTSLLKESTHGVSTLLKEITTASAVPSFMRPEPESDRLPVLSKTVTQGRLKVDAELQKRPHQCPVQPQHDAPTLGLKGLSNEDGKSKREKKKKKMVPNIISFDGDNEEEEQSCAEQVKTSDLTRESSEENSERSSSAVSSAMDSSMILASFSPDLNRKPDSNEKQSNSSILKTVDVCLNGDSNHKKLDMKSIDDDDDDDDDEVVDREHIYQKISQSRENEEGRPDSEQSLVQNLSVSQMSSWNTLQVLNDNDSSDILFPVMAVGSYSQSDATSDNLVCCDEHDNVILAVELAQKGSQHQYSSEAAPPLQVDVVSGLLPTSTVPETMTVVLPNLRSGDSDIMIPEPKPVVDNDELANTYERKLIEVAEMHGELIEFNERLHRLLMAKEALISQMRQELIDLRGPVPGDLSQTSEDQSLSDFEMFTSGSKMMNGTSTGDTLNSEHCTSG
SIO_010081: snx29
subclass of: SO_0000673
so part of: snx29
location: join(4355900..4355918,4401718..4401782,4405424..4405476,4408021..4408145,4426633..4426813,4428145..4428215,4434768..4435016,4437728..4437832,4441676..4442111,4447786..4447910,4448993..4449086,4449274..4449356,4514625..4514731,4589910..4590026,4614607..4614662,4689671..4689749)
location: region:4355900-4689749:1
so has part: feature:4355900-4355918:1:exon
so has part: feature:4401718-4401782:1:exon
so has part: feature:4405424-4405476:1:exon
so has part: feature:4408021-4408145:1:exon
so has part: feature:4426633-4426813:1:exon
so has part: feature:4428145-4428215:1:exon
so has part: feature:4434768-4435016:1:exon
so has part: feature:4437728-4437832:1:exon
so has part: feature:4441676-4442111:1:exon
so has part: feature:4447786-4447910:1:exon
so has part: feature:4448993-4449086:1:exon
so has part: feature:4449274-4449356:1:exon
so has part: feature:4514625-4514731:1:exon
so has part: feature:4589910-4590026:1:exon
so has part: feature:4614607-4614662:1:exon
so has part: feature:4689671-4689749:1:exon

XP_048465459.1
type: Protein
SIO_000068: ncbiprotein

position:4355900:1
position: 4355900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4689749:1
position: 4689749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355900-4355918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4401718-4401782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4405424-4405476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4408021-4408145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4426633-4426813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4428145-4428215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4434768-4435016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4437728-4437832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4441676-4442111:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4447786-4447910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4448993-4449086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4449274-4449356:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4514625-4514731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4589910-4590026:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4614607-4614662:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4689671-4689749:1:exon

snx29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: snx29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-29 isoform X2
translation: MAGNMSVFQQNDCRRQSLLERLLDAVKQCQIRFGGRKEIASDTDSRVICLCAQFETVLQHGLRRSRGLALTAAAIKQAAGFANKTETDPVFWYYVKEHLNKHELQRYYSLKNITTDIGRGRAWLRSALNEHSLERYMHMLLADANLLSIFYEDWSFMREEERASMLPTMAAGLNSILFAINIDNEDLNGPNKPVSAVANLLKESTQNVTSLLKESTHGVSTLLKEITTASAVPSFMRPEPESDRLPVLSKTVTQGRLKVDAELQKRPHQCPVQPQHDAPTLGLKGLSNEDGKSKREKKKKKMVPNIISFDGDNEEEEQSCAEQVKTSDLTRESSEENSERSSSAVSSAMDSSMILASFSPDLNRKPDSNEKQSNSSILKTVDVCLNGDSNHKKLDMKSIDDDDDDDDDEVVDREHIYQKISQSRENEEGRPDSEQSLVQNLSVSQMSSWNTLQVLNDNDSSDILFPVMAVGSYSQSDATSDNLVCCDEHDNVILAVELAQKGSQHQYSSEAAPPLQVDVVSGLLPTSTVPETMTVVLPNLRSGDSDIMIPEPKPVVDNDELANTYERKLIELIEGRCE
SIO_010081: snx29
subclass of: SO_0000673
so part of: snx29
location: join(4355900..4355918,4401718..4401782,4405424..4405476,4408021..4408145,4426633..4426813,4428145..4428215,4434768..4435016,4437728..4437832,4441676..4442111,4447786..4447910,4448993..4449086,4449274..4449356,4514625..4514731,4520414..4520437)
location: region:4355900-4520437:1
so has part: feature:4355900-4355918:1:exon
so has part: feature:4401718-4401782:1:exon
so has part: feature:4405424-4405476:1:exon
so has part: feature:4408021-4408145:1:exon
so has part: feature:4426633-4426813:1:exon
so has part: feature:4428145-4428215:1:exon
so has part: feature:4434768-4435016:1:exon
so has part: feature:4437728-4437832:1:exon
so has part: feature:4441676-4442111:1:exon
so has part: feature:4447786-4447910:1:exon
so has part: feature:4448993-4449086:1:exon
so has part: feature:4449274-4449356:1:exon
so has part: feature:4514625-4514731:1:exon
so has part: feature:4520414-4520437:1:exon

XP_048465460.1
type: Protein
SIO_000068: ncbiprotein

position:4520437:1
position: 4520437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355900-4355918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4401718-4401782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4405424-4405476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4408021-4408145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4426633-4426813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4428145-4428215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4434768-4435016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4437728-4437832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4441676-4442111:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4447786-4447910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4448993-4449086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4449274-4449356:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4514625-4514731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4520414-4520437:1:exon

snx29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: snx29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-29 isoform X3
translation: MAGNMSVFQQNDCRRQSLLERLLDAVKQCQIRFGGRKEIASDTDSRVICLCAQFETVLQHGLRRSRGLALTAAAIKQAAGFANKTETDPVFWYYVKEHLNKHELQRYYSLKNITTDIGRGRAWLRSALNEHSLERYMHMLLADANLLSIFYEDWSFMREEERASMLPTMAAGLNSILFAINIDNEDLNGPNKPVSAVANLLKESTQNVTSLLKESTHGVSTLLKEITTASAVPSFMRPEPESDRLPVLSKTVTQGRLKVDAELQKRPHQCPVQPQHDAPTLGLKGLSNEDGKSKREKKKKKMVPNIISFDGDNEEEEQSCAEQVKTSDLTRESSEENSERSSSAVSSAMDSSMILASFSPDLNRKPDSNEKQSNSSILKTVDVCLNGDSNHKKLDMKSIDDDDDDDDDEVVDREHIYQKISQSRENEEGRPDSEQSLVQNLSVSQMSSWNTLQVLNDNDSSDILFPVMAVGSYSQSDATSDNLVCCDEHDNVILAVELAQKGSQHQYSSEAAPPLQVDVVSGLLPTSTVPETMTVEFCLKYLCGGGSGLEVLSLDY
SIO_010081: snx29
subclass of: SO_0000673
so part of: snx29
location: join(4355900..4355918,4401718..4401782,4405424..4405476,4408021..4408145,4426633..4426813,4428145..4428215,4434768..4435016,4437728..4437832,4441676..4442111,4447786..4447910,4448993..4449086,4449274..4449356,4465103..4465167)
location: region:4355900-4465167:1
so has part: feature:4355900-4355918:1:exon
so has part: feature:4401718-4401782:1:exon
so has part: feature:4405424-4405476:1:exon
so has part: feature:4408021-4408145:1:exon
so has part: feature:4426633-4426813:1:exon
so has part: feature:4428145-4428215:1:exon
so has part: feature:4434768-4435016:1:exon
so has part: feature:4437728-4437832:1:exon
so has part: feature:4441676-4442111:1:exon
so has part: feature:4447786-4447910:1:exon
so has part: feature:4448993-4449086:1:exon
so has part: feature:4449274-4449356:1:exon
so has part: feature:4465103-4465167:1:exon

XP_048465461.1
type: Protein
SIO_000068: ncbiprotein

position:4465167:1
position: 4465167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355900-4355918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4401718-4401782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4405424-4405476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4408021-4408145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4426633-4426813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4428145-4428215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4434768-4435016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4437728-4437832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4441676-4442111:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4447786-4447910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4448993-4449086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4449274-4449356:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4465103-4465167:1:exon

cpped1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cpped1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4785337..4942629)
location: region:4785337-4942629:-1
so has part: feature:4785337-4942629:-1:exon
subclass of: SO_0000010

109929506
type: Gene
SIO_000068: ncbigene

position:4785337:-1
position: 4785337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4942629:-1
position: 4942629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4785337-4942629:-1:exon

cpped1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cpped1
product: calcineurin-like phosphoesterase domain containing 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609854.1
SIO_010081: cpped1
subclass of: SO_0000673
so part of: cpped1
location: complement(join(4785337..4785973,4848113..4848535,4915938..4916150,4942130..4942629))
location: region:4785337-4942629:-1
so has part: feature:4942130-4942629:-1:exon
so has part: feature:4915938-4916150:-1:exon
so has part: feature:4848113-4848535:-1:exon
so has part: feature:4785337-4785973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4942130-4942629:-1:exon

position:4942130:-1
position: 4942130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4915938-4916150:-1:exon

position:4915938:-1
position: 4915938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4916150:-1
position: 4916150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4848113-4848535:-1:exon

position:4848113:-1
position: 4848113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4848535:-1
position: 4848535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4785337-4785973:-1:exon

position:4785973:-1
position: 4785973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cpped1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cpped1
product: calcineurin-like phosphoesterase domain containing 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609857.1
SIO_010081: cpped1
subclass of: SO_0000673
so part of: cpped1
location: complement(join(4785337..4785973,4848113..4848535,4915938..4916150,4935081..4935132,4942130..4942236))
location: region:4785337-4942236:-1
so has part: feature:4942130-4942236:-1:exon
so has part: feature:4935081-4935132:-1:exon
so has part: feature:4915938-4916150:-1:exon
so has part: feature:4848113-4848535:-1:exon
so has part: feature:4785337-4785973:-1:exon

position:4942236:-1
position: 4942236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4942130-4942236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4935081-4935132:-1:exon

position:4935081:-1
position: 4935081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4935132:-1
position: 4935132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4915938-4916150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4848113-4848535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4785337-4785973:-1:exon

cpped1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cpped1
product: calcineurin-like phosphoesterase domain containing 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609856.1
SIO_010081: cpped1
subclass of: SO_0000673
so part of: cpped1
location: complement(join(4785337..4785973,4848113..4848535,4915938..4916150,4938604..4938717))
location: region:4785337-4938717:-1
so has part: feature:4938604-4938717:-1:exon
so has part: feature:4915938-4916150:-1:exon
so has part: feature:4848113-4848535:-1:exon
so has part: feature:4785337-4785973:-1:exon

position:4938717:-1
position: 4938717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4938604-4938717:-1:exon

position:4938604:-1
position: 4938604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4915938-4916150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4848113-4848535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4785337-4785973:-1:exon

cpped1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cpped1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase CPPED1 isoform X1
translation: MAARAKEAIFHRAQCRRFKGFNKEKDWKGPFYFVQGTDPQFGLMKAWKVGDHDDSGDEWQEEIKLMEQAVQAINKLTLKPKFFVLCGDLIHAMPGSPLREEQTNDLKHVLMGIDPKIPLVFVSGNHDIGNSPTPDTIAEYCKNWGDDYFSFWVGGVLFLVLNSQFFQDASNCPELKEAHDLWLDNQLAAAEQLKIKHVIVFQHIPLFLQSAEEENGYFNLEKSKRLDLLQKFEKGGVKAIFSGHYHRNAGGKFNNLDMVVTSAIGCQLGEDKHGVRVVVVTEDKIHHKYISLDELSDLTVKEVISDHLEVNDESPCLFH
SIO_010081: cpped1
subclass of: SO_0000673
so part of: cpped1
location: complement(join(4785720..4785973,4848113..4848535,4915938..4916150,4942130..4942199))
location: region:4785720-4942199:-1
so has part: feature:4942130-4942199:-1:exon
so has part: feature:4915938-4916150:-1:exon
so has part: feature:4848113-4848535:-1:exon
so has part: feature:4785720-4785973:-1:exon

XP_048465811.1
type: Protein
SIO_000068: ncbiprotein

position:4785720:-1
position: 4785720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4942199:-1
position: 4942199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4942130-4942199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4915938-4916150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4848113-4848535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4785720-4785973:-1:exon

cpped1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cpped1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase CPPED1 isoform X2
translation: MCHMPWGKSCKMKEKDWKGPFYFVQGTDPQFGLMKAWKVGDHDDSGDEWQEEIKLMEQAVQAINKLTLKPKFFVLCGDLIHAMPGSPLREEQTNDLKHVLMGIDPKIPLVFVSGNHDIGNSPTPDTIAEYCKNWGDDYFSFWVGGVLFLVLNSQFFQDASNCPELKEAHDLWLDNQLAAAEQLKIKHVIVFQHIPLFLQSAEEENGYFNLEKSKRLDLLQKFEKGGVKAIFSGHYHRNAGGKFNNLDMVVTSAIGCQLGEDKHGVRVVVVTEDKIHHKYISLDELSDLTVKEVISDHLEVNDESPCLFH
SIO_010081: cpped1
subclass of: SO_0000673
so part of: cpped1
location: complement(join(4785720..4785973,4848113..4848535,4915938..4916150,4938604..4938643))
location: region:4785720-4938643:-1
so has part: feature:4938604-4938643:-1:exon
so has part: feature:4915938-4916150:-1:exon
so has part: feature:4848113-4848535:-1:exon
so has part: feature:4785720-4785973:-1:exon

XP_048465813.1
type: Protein
SIO_000068: ncbiprotein

position:4938643:-1
position: 4938643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4938604-4938643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4915938-4916150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4848113-4848535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4785720-4785973:-1:exon

cpped1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cpped1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase CPPED1 isoform X3
translation: MKAWKVGDHDDSGDEWQEEIKLMEQAVQAINKLTLKPKFFVLCGDLIHAMPGSPLREEQTNDLKHVLMGIDPKIPLVFVSGNHDIGNSPTPDTIAEYCKNWGDDYFSFWVGGVLFLVLNSQFFQDASNCPELKEAHDLWLDNQLAAAEQLKIKHVIVFQHIPLFLQSAEEENGYFNLEKSKRLDLLQKFEKGGVKAIFSGHYHRNAGGKFNNLDMVVTSAIGCQLGEDKHGVRVVVVTEDKIHHKYISLDELSDLTVKEVISDHLEVNDESPCLFH
SIO_010081: cpped1
subclass of: SO_0000673
so part of: cpped1
location: complement(join(4785720..4785973,4848113..4848535,4915938..4916091))
location: region:4785720-4916091:-1
so has part: feature:4915938-4916091:-1:exon
so has part: feature:4848113-4848535:-1:exon
so has part: feature:4785720-4785973:-1:exon

XP_048465814.1
type: Protein
SIO_000068: ncbiprotein

position:4916091:-1
position: 4916091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4915938-4916091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4848113-4848535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4785720-4785973:-1:exon

shisa9a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: shisa9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4997132..5269274
location: region:4997132-5269274:1
so has part: feature:4997132-5269274:1:exon
subclass of: SO_0000010

109918609
type: Gene
SIO_000068: ncbigene

position:4997132:1
position: 4997132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5269274:1
position: 5269274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4997132-5269274:1:exon

shisa9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: shisa9a
product: shisa family member 9a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048609636.1
SIO_010081: shisa9a
subclass of: SO_0000673
so part of: shisa9a
location: join(4997132..4998523,5013673..5013797,5213751..5213906,5266878..5269274)
location: region:4997132-5269274:1
so has part: feature:4997132-4998523:1:exon
so has part: feature:5013673-5013797:1:exon
so has part: feature:5213751-5213906:1:exon
so has part: feature:5266878-5269274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4997132-4998523:1:exon

position:4998523:1
position: 4998523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5013673-5013797:1:exon

position:5013673:1
position: 5013673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5013797:1
position: 5013797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5213751-5213906:1:exon

position:5213751:1
position: 5213751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5213906:1
position: 5213906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5266878-5269274:1:exon

position:5266878:1
position: 5266878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

shisa9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: shisa9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-9A
translation: MSVRLLRYLLLDLLGFWCPVLDRMAQAKAGRQLGPLLLGSSSNSSGALELPATPDRCRGYFDVMGQFDAAFNCNTSIYQYCCGTCGYRYCCQFKESRLDQSICSNYDTPNWANVGKPPQRPDDTAFDQTRDKTNLIVYFICGVVAIMVLVGIFTKLGLEKSQRPQRELNSRALTDVLKQQGQSTSNHVERDGKVAIHVQHESMQPTSSRSTFDQTQMNNTGPTYPLISQMPQPHSYPTLGQGSHSFEQQVPGKELNKYASLKLVAEKANDDFFAKRQHFAELASKGSLPLHPVQMPMQHEDPAHGSNTYNPKLTGQRNKMTKMHTHPLVFDAEYKTWDPSDTTIRRQTYATKRPCTVGPLIEKTSPQPQHYTAPQPYFVTNSKTEVTV
SIO_010081: shisa9a
subclass of: SO_0000673
so part of: shisa9a
location: join(4998012..4998523,5013673..5013797,5213751..5213906,5266878..5267251)
location: region:4998012-5267251:1
so has part: feature:4998012-4998523:1:exon
so has part: feature:5013673-5013797:1:exon
so has part: feature:5213751-5213906:1:exon
so has part: feature:5266878-5267251:1:exon

XP_048465593.1
type: Protein
SIO_000068: ncbiprotein

position:4998012:1
position: 4998012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5267251:1
position: 5267251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4998012-4998523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5013673-5013797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5213751-5213906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5266878-5267251:1:exon

LOC125485643
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5329834..5375780
location: region:5329834-5375780:1
so has part: feature:5329834-5375780:1:exon
subclass of: SO_0000011

125485643
type: Gene
SIO_000068: ncbigene

position:5329834:1
position: 5329834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5375780:1
position: 5375780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5329834-5375780:1:exon

LOC125485643
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485643
product: uncharacterized LOC125485643
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007264349.1
SIO_010081: LOC125485643
subclass of: SO_0000673
so part of: LOC125485643
location: join(5329834..5329909,5372293..5372356,5375684..5375780)
location: region:5329834-5375780:1
so has part: feature:5329834-5329909:1:exon
so has part: feature:5372293-5372356:1:exon
so has part: feature:5375684-5375780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5329834-5329909:1:exon

position:5329909:1
position: 5329909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5372293-5372356:1:exon

position:5372293:1
position: 5372293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5372356:1
position: 5372356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5375684-5375780:1:exon

position:5375684:1
position: 5375684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ercc4
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ercc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5620921..5653095
location: region:5620921-5653095:1
so has part: feature:5620921-5653095:1:exon
subclass of: SO_0000010

109919094
type: Gene
SIO_000068: ncbigene

position:5620921:1
position: 5620921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5653095:1
position: 5653095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5620921-5653095:1:exon

ercc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ercc4
product: excision repair cross-complementation group 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048609798.1
SIO_010081: ercc4
subclass of: SO_0000673
so part of: ercc4
location: join(5620921..5621129,5624139..5624319,5625545..5625740,5628037..5628244,5630503..5630683,5634410..5634541,5637860..5637967,5639001..5639598,5645236..5645328,5646835..5646947,5650500..5653095)
location: region:5620921-5653095:1
so has part: feature:5620921-5621129:1:exon
so has part: feature:5624139-5624319:1:exon
so has part: feature:5625545-5625740:1:exon
so has part: feature:5628037-5628244:1:exon
so has part: feature:5630503-5630683:1:exon
so has part: feature:5634410-5634541:1:exon
so has part: feature:5637860-5637967:1:exon
so has part: feature:5639001-5639598:1:exon
so has part: feature:5645236-5645328:1:exon
so has part: feature:5646835-5646947:1:exon
so has part: feature:5650500-5653095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5620921-5621129:1:exon

position:5621129:1
position: 5621129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5624139-5624319:1:exon

position:5624139:1
position: 5624139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5624319:1
position: 5624319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5625545-5625740:1:exon

position:5625545:1
position: 5625545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5625740:1
position: 5625740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5628037-5628244:1:exon

position:5628037:1
position: 5628037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5628244:1
position: 5628244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5630503-5630683:1:exon

position:5630503:1
position: 5630503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5630683:1
position: 5630683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5634410-5634541:1:exon

position:5634410:1
position: 5634410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5634541:1
position: 5634541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5637860-5637967:1:exon

position:5637860:1
position: 5637860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5637967:1
position: 5637967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5639001-5639598:1:exon

position:5639001:1
position: 5639001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5639598:1
position: 5639598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5645236-5645328:1:exon

position:5645236:1
position: 5645236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5645328:1
position: 5645328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5646835-5646947:1:exon

position:5646835:1
position: 5646835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5646947:1
position: 5646947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5650500-5653095:1:exon

position:5650500:1
position: 5650500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ercc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ercc4
product: excision repair cross-complementation group 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048609799.1
SIO_010081: ercc4
subclass of: SO_0000673
so part of: ercc4
location: join(5620921..5621129,5624139..5624319,5625545..5625740,5628037..5628244,5630503..5630683,5634410..5634541,5637860..5637967,5639001..5639598,5645236..5645328,5646835..5646947,5650089..5653093)
location: region:5620921-5653093:1
so has part: feature:5620921-5621129:1:exon
so has part: feature:5624139-5624319:1:exon
so has part: feature:5625545-5625740:1:exon
so has part: feature:5628037-5628244:1:exon
so has part: feature:5630503-5630683:1:exon
so has part: feature:5634410-5634541:1:exon
so has part: feature:5637860-5637967:1:exon
so has part: feature:5639001-5639598:1:exon
so has part: feature:5645236-5645328:1:exon
so has part: feature:5646835-5646947:1:exon
so has part: feature:5650089-5653093:1:exon

position:5653093:1
position: 5653093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5620921-5621129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624139-5624319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625545-5625740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628037-5628244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5630503-5630683:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5634410-5634541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5637860-5637967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5639001-5639598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5645236-5645328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5646835-5646947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5650089-5653093:1:exon

position:5650089:1
position: 5650089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ercc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ercc4
product: excision repair cross-complementation group 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048609800.1
SIO_010081: ercc4
subclass of: SO_0000673
so part of: ercc4
location: join(5620921..5621129,5624139..5624319,5625545..5625740,5628037..5628244,5630503..5630683,5634410..5634541,5637860..5637967,5639001..5639598,5645236..5645328,5646835..5646947,5650092..5650493)
location: region:5620921-5650493:1
so has part: feature:5620921-5621129:1:exon
so has part: feature:5624139-5624319:1:exon
so has part: feature:5625545-5625740:1:exon
so has part: feature:5628037-5628244:1:exon
so has part: feature:5630503-5630683:1:exon
so has part: feature:5634410-5634541:1:exon
so has part: feature:5637860-5637967:1:exon
so has part: feature:5639001-5639598:1:exon
so has part: feature:5645236-5645328:1:exon
so has part: feature:5646835-5646947:1:exon
so has part: feature:5650092-5650493:1:exon

position:5650493:1
position: 5650493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5620921-5621129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624139-5624319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625545-5625740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628037-5628244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5630503-5630683:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5634410-5634541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5637860-5637967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5639001-5639598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5645236-5645328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5646835-5646947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5650092-5650493:1:exon

position:5650092:1
position: 5650092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ercc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ercc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair endonuclease XPF isoform X1
translation: MTPLLEHESQIFLDLFHEDGLVIMAKGMGVDRILFNFLKLYSDPGNLVLVLNTGVAEEQYFIEQLRSEGVTHLPRIITNEVLSNDRYTVYTEGGILFVTSRILVVDLLTDRIPASLITGILVYKAHRIIESCQEAFILRLYRQKNKKGFIKAFTDNAAAFSLGFCRVERVMRNLFVRKLYLWPRFHITVGSCLDRHKPEVIELHVSLTPSMLAIQTAIMDVMNACLKELKRYNPSLDVEELSLENAIGKSFDKAICYYLDPIWHQLGAKTKSLVQDLKVLRTLLEYLTQYDCVTFLNLLESLRATEKAFGQNSGWLFLDASNTMFVNARARVYKRPDSKLNTSANVIKTEPKETDKTEQKELILEMNPKWEALSEVLAEIKRENEPSETLTASGHVLICASDDRTCAQLKEYISVGAEDLLMRLYNKTFGKSEKAEDAGETCIKDKKPGKTKAKSKPGNGPKLKKAKAETAKNRRKPELTLTQMVGRENDEGSHKVKEGEEEEEIEESAGPEANIEEAQSKGVIMKLPTDACYGILNEPLIVIHPLQGCSDPYSLSRVLHEIEPRYVILYDAELSFVRQLEIYRASKPGKPLRVYFLIYGGSTEEQRYLTKLRKEKTAFEILIREKAMMVIPEEREGRDDLNPDLTRSVAPATAIADTRKAGGQTQKHEQQRIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSVSDLIGSLNKGRLYTQCITMSRYYKRPVLLIEFDPNKPFSLNFRGSAHQDISINDLTSKLTLLTLHFPRLRLLWCPSPHVAAELFEELKQNRPEPDAAAAVAVSGDSEMVSESDRYNPGPQDFLLKMPGVNTKNCRALMNHVRSIAELVTLSQERLAEILGNANNAKQLWEFIHSSYLDCTVQGKYRR
SIO_010081: ercc4
subclass of: SO_0000673
so part of: ercc4
location: join(5620956..5621129,5624139..5624319,5625545..5625740,5628037..5628244,5630503..5630683,5634410..5634541,5637860..5637967,5639001..5639598,5645236..5645328,5646835..5646947,5650500..5651233)
location: region:5620956-5651233:1
so has part: feature:5620956-5621129:1:exon
so has part: feature:5624139-5624319:1:exon
so has part: feature:5625545-5625740:1:exon
so has part: feature:5628037-5628244:1:exon
so has part: feature:5630503-5630683:1:exon
so has part: feature:5634410-5634541:1:exon
so has part: feature:5637860-5637967:1:exon
so has part: feature:5639001-5639598:1:exon
so has part: feature:5645236-5645328:1:exon
so has part: feature:5646835-5646947:1:exon
so has part: feature:5650500-5651233:1:exon

XP_048465755.1
type: Protein
SIO_000068: ncbiprotein

position:5620956:1
position: 5620956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5651233:1
position: 5651233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5620956-5621129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624139-5624319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625545-5625740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628037-5628244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5630503-5630683:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5634410-5634541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5637860-5637967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5639001-5639598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5645236-5645328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5646835-5646947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5650500-5651233:1:exon

ercc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ercc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair endonuclease XPF isoform X2
translation: MTPLLEHESQIFLDLFHEDGLVIMAKGMGVDRILFNFLKLYSDPGNLVLVLNTGVAEEQYFIEQLRSEGVTHLPRIITNEVLSNDRYTVYTEGGILFVTSRILVVDLLTDRIPASLITGILVYKAHRIIESCQEAFILRLYRQKNKKGFIKAFTDNAAAFSLGFCRVERVMRNLFVRKLYLWPRFHITVGSCLDRHKPEVIELHVSLTPSMLAIQTAIMDVMNACLKELKRYNPSLDVEELSLENAIGKSFDKAICYYLDPIWHQLGAKTKSLVQDLKVLRTLLEYLTQYDCVTFLNLLESLRATEKAFGQNSGWLFLDASNTMFVNARARVYKRPDSKLNTSANVIKTEPKETDKTEQKELILEMNPKWEALSEVLAEIKRENEPSETLTASGHVLICASDDRTCAQLKEYISVGAEDLLMRLYNKTFGKSEKAEDAGETCIKDKKPGKTKAKSKPGNGPKLKKAKAETAKNRRKPELTLTQMVGRENDEGSHKVKEGEEEEEIEESAGPEANIEEAQSKGVIMKLPTDACYGILNEPLIVIHPLQGCSDPYSLSRVLHEIEPRYVILYDAELSFVRQLEIYRASKPGKPLRVYFLIYGGSTEEQRYLTKLRKEKTAFEILIREKAMMVIPEEREGRDDLNPDLTRSVAPATAIADTRKAAVIPRCRISRGESTSKIILSTCTLRILPVSIRSSLTRLNFSRCKLILSIGQVCELAAEVGFRTVLPVSNTNASLIRNRGNVALSLQLACPIKAKEQN
SIO_010081: ercc4
subclass of: SO_0000673
so part of: ercc4
location: join(5620956..5621129,5624139..5624319,5625545..5625740,5628037..5628244,5630503..5630683,5634410..5634541,5637860..5637967,5639001..5639598,5645236..5645328,5646835..5646947,5650089..5650381)
location: region:5620956-5650381:1
so has part: feature:5620956-5621129:1:exon
so has part: feature:5624139-5624319:1:exon
so has part: feature:5625545-5625740:1:exon
so has part: feature:5628037-5628244:1:exon
so has part: feature:5630503-5630683:1:exon
so has part: feature:5634410-5634541:1:exon
so has part: feature:5637860-5637967:1:exon
so has part: feature:5639001-5639598:1:exon
so has part: feature:5645236-5645328:1:exon
so has part: feature:5646835-5646947:1:exon
so has part: feature:5650089-5650381:1:exon

XP_048465756.1
type: Protein
SIO_000068: ncbiprotein

position:5650381:1
position: 5650381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5620956-5621129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624139-5624319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625545-5625740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628037-5628244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5630503-5630683:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5634410-5634541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5637860-5637967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5639001-5639598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5645236-5645328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5646835-5646947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5650089-5650381:1:exon

ercc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ercc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair endonuclease XPF isoform X3
translation: MTPLLEHESQIFLDLFHEDGLVIMAKGMGVDRILFNFLKLYSDPGNLVLVLNTGVAEEQYFIEQLRSEGVTHLPRIITNEVLSNDRYTVYTEGGILFVTSRILVVDLLTDRIPASLITGILVYKAHRIIESCQEAFILRLYRQKNKKGFIKAFTDNAAAFSLGFCRVERVMRNLFVRKLYLWPRFHITVGSCLDRHKPEVIELHVSLTPSMLAIQTAIMDVMNACLKELKRYNPSLDVEELSLENAIGKSFDKAICYYLDPIWHQLGAKTKSLVQDLKVLRTLLEYLTQYDCVTFLNLLESLRATEKAFGQNSGWLFLDASNTMFVNARARVYKRPDSKLNTSANVIKTEPKETDKTEQKELILEMNPKWEALSEVLAEIKRENEPSETLTASGHVLICASDDRTCAQLKEYISVGAEDLLMRLYNKTFGKSEKAEDAGETCIKDKKPGKTKAKSKPGNGPKLKKAKAETAKNRRKPELTLTQMVGRENDEGSHKVKEGEEEEEIEESAGPEANIEEAQSKGVIMKLPTDACYGILNEPLIVIHPLQGCSDPYSLSRVLHEIEPRYVILYDAELSFVRQLEIYRASKPGKPLRVYFLIYGGSTEEQRYLTKLRKEKTAFEILIREKAMMVIPEEREGRDDLNPDLTRSVAPATAIADTRKAVIPRCRISRGESTSKIILSTCTLRILPVSIRSSLTRLNFSRCKLILSIGQVCELAAEVGFRTVLPVSNTNASLIRNRGNVALSLQLACPIKAKEQN
SIO_010081: ercc4
subclass of: SO_0000673
so part of: ercc4
location: join(5620956..5621129,5624139..5624319,5625545..5625740,5628037..5628244,5630503..5630683,5634410..5634541,5637860..5637967,5639001..5639598,5645236..5645328,5646835..5646947,5650092..5650381)
location: region:5620956-5650381:1
so has part: feature:5620956-5621129:1:exon
so has part: feature:5624139-5624319:1:exon
so has part: feature:5625545-5625740:1:exon
so has part: feature:5628037-5628244:1:exon
so has part: feature:5630503-5630683:1:exon
so has part: feature:5634410-5634541:1:exon
so has part: feature:5637860-5637967:1:exon
so has part: feature:5639001-5639598:1:exon
so has part: feature:5645236-5645328:1:exon
so has part: feature:5646835-5646947:1:exon
so has part: feature:5650092-5650381:1:exon

XP_048465757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5620956-5621129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624139-5624319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625545-5625740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628037-5628244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5630503-5630683:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5634410-5634541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5637860-5637967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5639001-5639598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5645236-5645328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5646835-5646947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5650092-5650381:1:exon

mrtfba
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mrtfba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5682898..5925182
location: region:5682898-5925182:1
so has part: feature:5682898-5925182:1:exon
subclass of: SO_0000010

109919111
type: Gene
SIO_000068: ncbigene

position:5682898:1
position: 5682898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5925182:1
position: 5925182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5682898-5925182:1:exon

mrtfba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mrtfba
product: myocardin related transcription factor Ba, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609802.1
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5682898..5683006,5772175..5772277,5780074..5780151,5790607..5790692,5794077..5794288,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904419,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5925182)
location: region:5682898-5925182:1
so has part: feature:5682898-5683006:1:exon
so has part: feature:5772175-5772277:1:exon
so has part: feature:5780074-5780151:1:exon
so has part: feature:5790607-5790692:1:exon
so has part: feature:5794077-5794288:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904419:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5925182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5682898-5683006:1:exon

position:5683006:1
position: 5683006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5772175-5772277:1:exon

position:5772175:1
position: 5772175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5772277:1
position: 5772277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5780074-5780151:1:exon

position:5780074:1
position: 5780074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5780151:1
position: 5780151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5790607-5790692:1:exon

position:5790607:1
position: 5790607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5790692:1
position: 5790692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5794077-5794288:1:exon

position:5794077:1
position: 5794077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5794288:1
position: 5794288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5857146-5857211:1:exon

position:5857146:1
position: 5857146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5857211:1
position: 5857211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5877277-5877332:1:exon

position:5877277:1
position: 5877277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5877332:1
position: 5877332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5880634-5880709:1:exon

position:5880634:1
position: 5880634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5880709:1
position: 5880709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5880838-5880999:1:exon

position:5880838:1
position: 5880838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5880999:1
position: 5880999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5891143-5891327:1:exon

position:5891143:1
position: 5891143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5891327:1
position: 5891327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5902305-5902436:1:exon

position:5902305:1
position: 5902305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5902436:1
position: 5902436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5904154-5904419:1:exon

position:5904154:1
position: 5904154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5904419:1
position: 5904419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5905463-5905643:1:exon

position:5905463:1
position: 5905463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5905643:1
position: 5905643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5911292-5912314:1:exon

position:5911292:1
position: 5911292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5912314:1
position: 5912314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5912707-5912847:1:exon

position:5912707:1
position: 5912707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5912847:1
position: 5912847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5915097-5915255:1:exon

position:5915097:1
position: 5915097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5915255:1
position: 5915255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5918492-5918632:1:exon

position:5918492:1
position: 5918492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5918632:1
position: 5918632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5919407-5919467:1:exon

position:5919407:1
position: 5919407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5919467:1
position: 5919467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5920812-5925182:1:exon

position:5920812:1
position: 5920812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mrtfba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mrtfba
product: myocardin related transcription factor Ba, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609801.1
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5682910..5683006,5715064..5715142,5772175..5772277,5780074..5780151,5790607..5790692,5794077..5794288,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904419,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5925182)
location: region:5682910-5925182:1
so has part: feature:5682910-5683006:1:exon
so has part: feature:5715064-5715142:1:exon
so has part: feature:5772175-5772277:1:exon
so has part: feature:5780074-5780151:1:exon
so has part: feature:5790607-5790692:1:exon
so has part: feature:5794077-5794288:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904419:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5925182:1:exon

position:5682910:1
position: 5682910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5682910-5683006:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5715064-5715142:1:exon

position:5715064:1
position: 5715064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5715142:1
position: 5715142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5772175-5772277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5780074-5780151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5790607-5790692:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5794077-5794288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5857146-5857211:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5877277-5877332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5880634-5880709:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5880838-5880999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5891143-5891327:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5902305-5902436:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5904154-5904419:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5905463-5905643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5911292-5912314:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5912707-5912847:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5915097-5915255:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5918492-5918632:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5919407-5919467:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5920812-5925182:1:exon

mrtfba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mrtfba
product: myocardin related transcription factor Ba, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609803.1
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5682910..5683006,5715064..5715142,5772175..5772277,5780074..5780151,5790607..5790692,5794077..5794288,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904401,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5925182)
location: region:5682910-5925182:1
so has part: feature:5682910-5683006:1:exon
so has part: feature:5715064-5715142:1:exon
so has part: feature:5772175-5772277:1:exon
so has part: feature:5780074-5780151:1:exon
so has part: feature:5790607-5790692:1:exon
so has part: feature:5794077-5794288:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904401:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5925182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5682910-5683006:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5715064-5715142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5772175-5772277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5780074-5780151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5790607-5790692:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5794077-5794288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5857146-5857211:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5877277-5877332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5880634-5880709:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5880838-5880999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5891143-5891327:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5902305-5902436:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5904154-5904401:1:exon

position:5904401:1
position: 5904401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5905463-5905643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5911292-5912314:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5912707-5912847:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5915097-5915255:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5918492-5918632:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5919407-5919467:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5920812-5925182:1:exon

mrtfba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mrtfba
product: myocardin related transcription factor Ba, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609804.1
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5682910..5683006,5715064..5715142,5772175..5772277,5780074..5780151,5794077..5794288,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904419,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5925182)
location: region:5682910-5925182:1
so has part: feature:5682910-5683006:1:exon
so has part: feature:5715064-5715142:1:exon
so has part: feature:5772175-5772277:1:exon
so has part: feature:5780074-5780151:1:exon
so has part: feature:5794077-5794288:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904419:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5925182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5682910-5683006:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5715064-5715142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5772175-5772277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5780074-5780151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5794077-5794288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5857146-5857211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5877277-5877332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5880634-5880709:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5880838-5880999:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5891143-5891327:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5902305-5902436:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5904154-5904419:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5905463-5905643:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5911292-5912314:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5912707-5912847:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5915097-5915255:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5918492-5918632:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5919407-5919467:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5920812-5925182:1:exon

mrtfba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mrtfba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocardin-related transcription factor B isoform X1
translation: MELRVICAQVNMEQQAAPTILLNVMDHIQVSELEDSVLQSLITPSPRSEMVAHEFQELTLQPNPHLPPLNERKNVLQLKLQQRRTREQLVDQGIMPPLKSPAAFHEQRKSLERARTEDYLKHKIRSRPERSELVRMHILEETLAEPSLQATQMKLKRARLADDLNEKIAQRPGPMELVEKNILPVDSSLKEAIKVGQVHYPKTLDTLSFDDDSSDALSPEQPGSQESQNSAPSPGETKVTESSSSSSSPVPNTIIQYHPQPMPDFLKPAPLSDQQGIRSVSTTLTTSTAVSTKPAPTLIKQSQPKTVNDKNRSKKNKDLKPRVKQLKYHQYIPPDKKHEKIELPMDTNYSRLLQQQQLFLQLQILSQQQQHYNYPAILPAPPKYVAQTRSCNDNQPTSSITTSTTLANYAPALSSSSSSSSSSSSYVTRHNNTPCWKLGTLPSNLDDMKVAELKLELKLRGLPVSGTKMDLIERLKSYQDLSSAAVATASNSAIARNQLTAAFPIAALSNVTTTTEATVTTASCNLQFYENAASPSPTSPAPSEQSNISTDDSKLTDMFTELVTMVSPSQLSIHASPVNTAVNEDSTGVNVATNNSNPQGASLASLDADAAEKDRKLQEKERQIIDLKRKLEQEQKLVEELKIQLEIEKRCQHQQSVTVNQKQLETHVKEEHNLSNCSISRQPASAPKQPLGPSAITNLGTCSQNAMKQNGLLMKQEGSLATAGQQNAVSQFYVNPPRQTPTTVIAQAQPHALLTTQTGTQLLLPLAIQAQNANPSSESKHLHAGNVKLQSHSQAQVQIPIAVPTSAPVQTSGSQKQPQPPEPVSQHNLSQNPQITKVFTSTSTANVFPNHIQTAATVQQCFINSSTGNVHHPRISNVNTPLNGPNCVHKSGPSSPPPSQQQLVIQHQVFSNSVSKGKELPRYEEAVKQTRSLKQQEVFNAHSQQMDDLFDILIESGEISPIVKEESLPATKMRAVVANISSLPVNAALSRPPPRVQMAPPPLSLESANDLSIGSENQLEAFLDGTLSSGANIPQVAVSQEGSDSLPVMEDLPNDLLNTPSILDQQHSAMDTCDMHFNAENSCLNLDLPDTNLDNMDWLDLTMPASTTGLTPINSAAPSVFSTDFLDGHDLQLHWE
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5790682..5790692,5794077..5794288,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904419,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5921350)
location: region:5790682-5921350:1
so has part: feature:5790682-5790692:1:exon
so has part: feature:5794077-5794288:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904419:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5921350:1:exon

XP_048465758.1
type: Protein
SIO_000068: ncbiprotein

position:5790682:1
position: 5790682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5921350:1
position: 5921350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5790682-5790692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5794077-5794288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5857146-5857211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5877277-5877332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5880634-5880709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5880838-5880999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5891143-5891327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5902305-5902436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5904154-5904419:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5905463-5905643:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5911292-5912314:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5912707-5912847:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5915097-5915255:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5918492-5918632:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5919407-5919467:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5920812-5921350:1:exon

mrtfba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mrtfba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocardin-related transcription factor B isoform X1
translation: MELRVICAQVNMEQQAAPTILLNVMDHIQVSELEDSVLQSLITPSPRSEMVAHEFQELTLQPNPHLPPLNERKNVLQLKLQQRRTREQLVDQGIMPPLKSPAAFHEQRKSLERARTEDYLKHKIRSRPERSELVRMHILEETLAEPSLQATQMKLKRARLADDLNEKIAQRPGPMELVEKNILPVDSSLKEAIKVGQVHYPKTLDTLSFDDDSSDALSPEQPGSQESQNSAPSPGETKVTESSSSSSSPVPNTIIQYHPQPMPDFLKPAPLSDQQGIRSVSTTLTTSTAVSTKPAPTLIKQSQPKTVNDKNRSKKNKDLKPRVKQLKYHQYIPPDKKHEKIELPMDTNYSRLLQQQQLFLQLQILSQQQQHYNYPAILPAPPKYVAQTRSCNDNQPTSSITTSTTLANYAPALSSSSSSSSSSSSYVTRHNNTPCWKLGTLPSNLDDMKVAELKLELKLRGLPVSGTKMDLIERLKSYQDLSSAAVATASNSAIARNQLTAAFPIAALSNVTTTTEATVTTASCNLQFYENAASPSPTSPAPSEQSNISTDDSKLTDMFTELVTMVSPSQLSIHASPVNTAVNEDSTGVNVATNNSNPQGASLASLDADAAEKDRKLQEKERQIIDLKRKLEQEQKLVEELKIQLEIEKRCQHQQSVTVNQKQLETHVKEEHNLSNCSISRQPASAPKQPLGPSAITNLGTCSQNAMKQNGLLMKQEGSLATAGQQNAVSQFYVNPPRQTPTTVIAQAQPHALLTTQTGTQLLLPLAIQAQNANPSSESKHLHAGNVKLQSHSQAQVQIPIAVPTSAPVQTSGSQKQPQPPEPVSQHNLSQNPQITKVFTSTSTANVFPNHIQTAATVQQCFINSSTGNVHHPRISNVNTPLNGPNCVHKSGPSSPPPSQQQLVIQHQVFSNSVSKGKELPRYEEAVKQTRSLKQQEVFNAHSQQMDDLFDILIESGEISPIVKEESLPATKMRAVVANISSLPVNAALSRPPPRVQMAPPPLSLESANDLSIGSENQLEAFLDGTLSSGANIPQVAVSQEGSDSLPVMEDLPNDLLNTPSILDQQHSAMDTCDMHFNAENSCLNLDLPDTNLDNMDWLDLTMPASTTGLTPINSAAPSVFSTDFLDGHDLQLHWE
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5790682..5790692,5794077..5794288,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904419,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5921350)
location: region:5790682-5921350:1
so has part: feature:5790682-5790692:1:exon
so has part: feature:5794077-5794288:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904419:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5921350:1:exon

XP_048465759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5790682-5790692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5794077-5794288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5857146-5857211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5877277-5877332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5880634-5880709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5880838-5880999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5891143-5891327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5902305-5902436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5904154-5904419:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5905463-5905643:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5911292-5912314:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5912707-5912847:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5915097-5915255:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5918492-5918632:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5919407-5919467:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5920812-5921350:1:exon

mrtfba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mrtfba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocardin-related transcription factor B isoform X2
translation: MELRVICAQVNMEQQAAPTILLNVMDHIQVSELEDSVLQSLITPSPRSEMVAHEFQELTLQPNPHLPPLNERKNVLQLKLQQRRTREQLVDQGIMPPLKSPAAFHEQRKSLERARTEDYLKHKIRSRPERSELVRMHILEETLAEPSLQATQMKLKRARLADDLNEKIAQRPGPMELVEKNILPVDSSLKEAIKVGQVHYPKTLDTLSFDDDSSDALSPEQPGSQESQNSAPSPGETKVTESSSSSSSPVPNTIIQYHPQPMPDFLKPAPLSDQQGIRSVSTTLTTSTAVSTKPAPTLIKQSQPKTVNDKNRSKKNKDLKPRVKQLKYHQYIPPDKKHEKIELPMDTNYSRLLQQQQLFLQLQILSQQQQHYNYPAILPAPPKSCNDNQPTSSITTSTTLANYAPALSSSSSSSSSSSSYVTRHNNTPCWKLGTLPSNLDDMKVAELKLELKLRGLPVSGTKMDLIERLKSYQDLSSAAVATASNSAIARNQLTAAFPIAALSNVTTTTEATVTTASCNLQFYENAASPSPTSPAPSEQSNISTDDSKLTDMFTELVTMVSPSQLSIHASPVNTAVNEDSTGVNVATNNSNPQGASLASLDADAAEKDRKLQEKERQIIDLKRKLEQEQKLVEELKIQLEIEKRCQHQQSVTVNQKQLETHVKEEHNLSNCSISRQPASAPKQPLGPSAITNLGTCSQNAMKQNGLLMKQEGSLATAGQQNAVSQFYVNPPRQTPTTVIAQAQPHALLTTQTGTQLLLPLAIQAQNANPSSESKHLHAGNVKLQSHSQAQVQIPIAVPTSAPVQTSGSQKQPQPPEPVSQHNLSQNPQITKVFTSTSTANVFPNHIQTAATVQQCFINSSTGNVHHPRISNVNTPLNGPNCVHKSGPSSPPPSQQQLVIQHQVFSNSVSKGKELPRYEEAVKQTRSLKQQEVFNAHSQQMDDLFDILIESGEISPIVKEESLPATKMRAVVANISSLPVNAALSRPPPRVQMAPPPLSLESANDLSIGSENQLEAFLDGTLSSGANIPQVAVSQEGSDSLPVMEDLPNDLLNTPSILDQQHSAMDTCDMHFNAENSCLNLDLPDTNLDNMDWLDLTMPASTTGLTPINSAAPSVFSTDFLDGHDLQLHWE
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5790682..5790692,5794077..5794288,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904401,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5921350)
location: region:5790682-5921350:1
so has part: feature:5790682-5790692:1:exon
so has part: feature:5794077-5794288:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904401:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5921350:1:exon

XP_048465760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5790682-5790692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5794077-5794288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5857146-5857211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5877277-5877332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5880634-5880709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5880838-5880999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5891143-5891327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5902305-5902436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5904154-5904401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5905463-5905643:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5911292-5912314:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5912707-5912847:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5915097-5915255:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5918492-5918632:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5919407-5919467:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5920812-5921350:1:exon

mrtfba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mrtfba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocardin-related transcription factor B isoform X3
translation: MEQQAAPTILLNVMDHIQVSELEDSVLQSLITPSPRSEMVAHEFQELTLQPNPHLPPLNERKNVLQLKLQQRRTREQLVDQGIMPPLKSPAAFHEQRKSLERARTEDYLKHKIRSRPERSELVRMHILEETLAEPSLQATQMKLKRARLADDLNEKIAQRPGPMELVEKNILPVDSSLKEAIKVGQVHYPKTLDTLSFDDDSSDALSPEQPGSQESQNSAPSPGETKVTESSSSSSSPVPNTIIQYHPQPMPDFLKPAPLSDQQGIRSVSTTLTTSTAVSTKPAPTLIKQSQPKTVNDKNRSKKNKDLKPRVKQLKYHQYIPPDKKHEKIELPMDTNYSRLLQQQQLFLQLQILSQQQQHYNYPAILPAPPKYVAQTRSCNDNQPTSSITTSTTLANYAPALSSSSSSSSSSSSYVTRHNNTPCWKLGTLPSNLDDMKVAELKLELKLRGLPVSGTKMDLIERLKSYQDLSSAAVATASNSAIARNQLTAAFPIAALSNVTTTTEATVTTASCNLQFYENAASPSPTSPAPSEQSNISTDDSKLTDMFTELVTMVSPSQLSIHASPVNTAVNEDSTGVNVATNNSNPQGASLASLDADAAEKDRKLQEKERQIIDLKRKLEQEQKLVEELKIQLEIEKRCQHQQSVTVNQKQLETHVKEEHNLSNCSISRQPASAPKQPLGPSAITNLGTCSQNAMKQNGLLMKQEGSLATAGQQNAVSQFYVNPPRQTPTTVIAQAQPHALLTTQTGTQLLLPLAIQAQNANPSSESKHLHAGNVKLQSHSQAQVQIPIAVPTSAPVQTSGSQKQPQPPEPVSQHNLSQNPQITKVFTSTSTANVFPNHIQTAATVQQCFINSSTGNVHHPRISNVNTPLNGPNCVHKSGPSSPPPSQQQLVIQHQVFSNSVSKGKELPRYEEAVKQTRSLKQQEVFNAHSQQMDDLFDILIESGEISPIVKEESLPATKMRAVVANISSLPVNAALSRPPPRVQMAPPPLSLESANDLSIGSENQLEAFLDGTLSSGANIPQVAVSQEGSDSLPVMEDLPNDLLNTPSILDQQHSAMDTCDMHFNAENSCLNLDLPDTNLDNMDWLDLTMPASTTGLTPINSAAPSVFSTDFLDGHDLQLHWE
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5794099..5794288,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904419,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5921350)
location: region:5794099-5921350:1
so has part: feature:5794099-5794288:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904419:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5921350:1:exon

XP_048465761.1
type: Protein
SIO_000068: ncbiprotein

position:5794099:1
position: 5794099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5794099-5794288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5857146-5857211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5877277-5877332:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5880634-5880709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5880838-5880999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5891143-5891327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5902305-5902436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5904154-5904419:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5905463-5905643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5911292-5912314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5912707-5912847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5915097-5915255:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5918492-5918632:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5919407-5919467:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5920812-5921350:1:exon

mrtfba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mrtfba
product: myocardin related transcription factor Ba, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609806.1
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5831829..5832034,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904419,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5925182)
location: region:5831829-5925182:1
so has part: feature:5831829-5832034:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904419:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5925182:1:exon

position:5831829:1
position: 5831829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5831829-5832034:1:exon

position:5832034:1
position: 5832034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5857146-5857211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5877277-5877332:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5880634-5880709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5880838-5880999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5891143-5891327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5902305-5902436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5904154-5904419:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5905463-5905643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5911292-5912314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5912707-5912847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5915097-5915255:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5918492-5918632:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5919407-5919467:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5920812-5925182:1:exon

mrtfba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mrtfba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocardin-related transcription factor B isoform X4
translation: MALLEPERSIVLQSAFKSVLQLKLQQRRTREQLVDQGIMPPLKSPAAFHEQRKSLERARTEDYLKHKIRSRPERSELVRMHILEETLAEPSLQATQMKLKRARLADDLNEKIAQRPGPMELVEKNILPVDSSLKEAIKVGQVHYPKTLDTLSFDDDSSDALSPEQPGSQESQNSAPSPGETKVTESSSSSSSPVPNTIIQYHPQPMPDFLKPAPLSDQQGIRSVSTTLTTSTAVSTKPAPTLIKQSQPKTVNDKNRSKKNKDLKPRVKQLKYHQYIPPDKKHEKIELPMDTNYSRLLQQQQLFLQLQILSQQQQHYNYPAILPAPPKYVAQTRSCNDNQPTSSITTSTTLANYAPALSSSSSSSSSSSSYVTRHNNTPCWKLGTLPSNLDDMKVAELKLELKLRGLPVSGTKMDLIERLKSYQDLSSAAVATASNSAIARNQLTAAFPIAALSNVTTTTEATVTTASCNLQFYENAASPSPTSPAPSEQSNISTDDSKLTDMFTELVTMVSPSQLSIHASPVNTAVNEDSTGVNVATNNSNPQGASLASLDADAAEKDRKLQEKERQIIDLKRKLEQEQKLVEELKIQLEIEKRCQHQQSVTVNQKQLETHVKEEHNLSNCSISRQPASAPKQPLGPSAITNLGTCSQNAMKQNGLLMKQEGSLATAGQQNAVSQFYVNPPRQTPTTVIAQAQPHALLTTQTGTQLLLPLAIQAQNANPSSESKHLHAGNVKLQSHSQAQVQIPIAVPTSAPVQTSGSQKQPQPPEPVSQHNLSQNPQITKVFTSTSTANVFPNHIQTAATVQQCFINSSTGNVHHPRISNVNTPLNGPNCVHKSGPSSPPPSQQQLVIQHQVFSNSVSKGKELPRYEEAVKQTRSLKQQEVFNAHSQQMDDLFDILIESGEISPIVKEESLPATKMRAVVANISSLPVNAALSRPPPRVQMAPPPLSLESANDLSIGSENQLEAFLDGTLSSGANIPQVAVSQEGSDSLPVMEDLPNDLLNTPSILDQQHSAMDTCDMHFNAENSCLNLDLPDTNLDNMDWLDLTMPASTTGLTPINSAAPSVFSTDFLDGHDLQLHWE
SIO_010081: mrtfba
subclass of: SO_0000673
so part of: mrtfba
location: join(5831980..5832034,5857146..5857211,5877277..5877332,5880634..5880709,5880838..5880999,5891143..5891327,5902305..5902436,5904154..5904419,5905463..5905643,5911292..5912314,5912707..5912847,5915097..5915255,5918492..5918632,5919407..5919467,5920812..5921350)
location: region:5831980-5921350:1
so has part: feature:5831980-5832034:1:exon
so has part: feature:5857146-5857211:1:exon
so has part: feature:5877277-5877332:1:exon
so has part: feature:5880634-5880709:1:exon
so has part: feature:5880838-5880999:1:exon
so has part: feature:5891143-5891327:1:exon
so has part: feature:5902305-5902436:1:exon
so has part: feature:5904154-5904419:1:exon
so has part: feature:5905463-5905643:1:exon
so has part: feature:5911292-5912314:1:exon
so has part: feature:5912707-5912847:1:exon
so has part: feature:5915097-5915255:1:exon
so has part: feature:5918492-5918632:1:exon
so has part: feature:5919407-5919467:1:exon
so has part: feature:5920812-5921350:1:exon

XP_048465763.1
type: Protein
SIO_000068: ncbiprotein

position:5831980:1
position: 5831980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5831980-5832034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5857146-5857211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5877277-5877332:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5880634-5880709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5880838-5880999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5891143-5891327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5902305-5902436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5904154-5904419:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5905463-5905643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5911292-5912314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5912707-5912847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5915097-5915255:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5918492-5918632:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5919407-5919467:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5920812-5921350:1:exon

dcun1d3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: dcun1d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5929890..6078587)
location: region:5929890-6078587:-1
so has part: feature:5929890-6078587:-1:exon
subclass of: SO_0000010

109919121
type: Gene
SIO_000068: ncbigene

position:5929890:-1
position: 5929890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6078587:-1
position: 6078587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5929890-6078587:-1:exon

dcun1d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dcun1d3
product: defective in cullin neddylation 1 domain containing 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020519099.2
SIO_010081: dcun1d3
subclass of: SO_0000673
so part of: dcun1d3
location: complement(join(5929890..5932418,5935968..5936509,5943629..5943713,6078160..6078587))
location: region:5929890-6078587:-1
so has part: feature:6078160-6078587:-1:exon
so has part: feature:5943629-5943713:-1:exon
so has part: feature:5935968-5936509:-1:exon
so has part: feature:5929890-5932418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6078160-6078587:-1:exon

position:6078160:-1
position: 6078160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5943629-5943713:-1:exon

position:5943629:-1
position: 5943629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5943713:-1
position: 5943713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5935968-5936509:-1:exon

position:5935968:-1
position: 5935968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5936509:-1
position: 5936509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5929890-5932418:-1:exon

position:5932418:-1
position: 5932418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dcun1d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dcun1d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DCN1-like protein 3
translation: MGQCVTKCRNPPSSLGSKTGDKESGSKSHVKKAASPGEEFSSMCAKASGDILANGTKKTDVVESTQPQLAHSGDSKKEESISCREEFSLKRAEELFSRYKDAHEDAILEEGMEWFCNDLSVDPTEFIVLLLAWKFQAATMCKFTRKEFVEGCKALNADSIDGIRARFPSLMNEAKVEDKFKDLYRFTFQFGLDSEEGQRSLRREIAVALWKLVFTQNVPFILDQWLSFLTENPPGIKGISRDTWNMFLNFIQVIGPDLTNYSEDEAWPSLFDTFVEWEMERRRKEGLAEEALHLVTEAANVEMLGQIATDYQVTDDE
SIO_010081: dcun1d3
subclass of: SO_0000673
so part of: dcun1d3
location: complement(join(5931899..5932418,5935968..5936401))
location: region:5931899-5936401:-1
so has part: feature:5935968-5936401:-1:exon
so has part: feature:5931899-5932418:-1:exon

XP_020374688.2
type: Protein
SIO_000068: ncbiprotein

position:5931899:-1
position: 5931899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5936401:-1
position: 5936401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5935968-5936401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5931899-5932418:-1:exon

LOC109935637
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109935637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5936419..6150427)
location: region:5936419-6150427:-1
so has part: feature:5936419-6150427:-1:exon
subclass of: SO_0000010

109935637
type: Gene
SIO_000068: ncbigene

position:5936419:-1
position: 5936419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6150427:-1
position: 6150427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5936419-6150427:-1:exon

LOC109935637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109935637
product: dynein axonemal heavy chain 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048609665.1
SIO_010081: LOC109935637
subclass of: SO_0000673
so part of: LOC109935637
location: complement(join(5936419..5936494,5994077..5994219,5998562..5998729,6003158..6003315,6003459..6003575,6003819..6004063,6004919..6005144,6006532..6008673,6011179..6011377,6012367..6012549,6014069..6014285,6015426..6015591,6021361..6022027,6026342..6026485,6029762..6029918,6030613..6030736,6033436..6033615,6034961..6035255,6037102..6037202,6037295..6037531,6038878..6039007,6041144..6041249,6042352..6042452,6045814..6046055,6049459..6049570,6054164..6054298,6056886..6057105,6058122..6058213,6061016..6061192,6064711..6064824,6068866..6068974,6070557..6070755,6071178..6071292,6095317..6095427,6099493..6099585,6102473..6102674,6112053..6112176,6113259..6113443,6115575..6115753,6118243..6118348,6119702..6119838,6122595..6122774,6123685..6123880,6126522..6126647,6127440..6127635,6130710..6130899,6134198..6134378,6137313..6137382,6140678..6140897,6149993..6150094,6150401..6150427))
location: region:5936419-6150427:-1
so has part: feature:6150401-6150427:-1:exon
so has part: feature:6149993-6150094:-1:exon
so has part: feature:6140678-6140897:-1:exon
so has part: feature:6137313-6137382:-1:exon
so has part: feature:6134198-6134378:-1:exon
so has part: feature:6130710-6130899:-1:exon
so has part: feature:6127440-6127635:-1:exon
so has part: feature:6126522-6126647:-1:exon
so has part: feature:6123685-6123880:-1:exon
so has part: feature:6122595-6122774:-1:exon
so has part: feature:6119702-6119838:-1:exon
so has part: feature:6118243-6118348:-1:exon
so has part: feature:6115575-6115753:-1:exon
so has part: feature:6113259-6113443:-1:exon
so has part: feature:6112053-6112176:-1:exon
so has part: feature:6102473-6102674:-1:exon
so has part: feature:6099493-6099585:-1:exon
so has part: feature:6095317-6095427:-1:exon
so has part: feature:6071178-6071292:-1:exon
so has part: feature:6070557-6070755:-1:exon
so has part: feature:6068866-6068974:-1:exon
so has part: feature:6064711-6064824:-1:exon
so has part: feature:6061016-6061192:-1:exon
so has part: feature:6058122-6058213:-1:exon
so has part: feature:6056886-6057105:-1:exon
so has part: feature:6054164-6054298:-1:exon
so has part: feature:6049459-6049570:-1:exon
so has part: feature:6045814-6046055:-1:exon
so has part: feature:6042352-6042452:-1:exon
so has part: feature:6041144-6041249:-1:exon
so has part: feature:6038878-6039007:-1:exon
so has part: feature:6037295-6037531:-1:exon
so has part: feature:6037102-6037202:-1:exon
so has part: feature:6034961-6035255:-1:exon
so has part: feature:6033436-6033615:-1:exon
so has part: feature:6030613-6030736:-1:exon
so has part: feature:6029762-6029918:-1:exon
so has part: feature:6026342-6026485:-1:exon
so has part: feature:6021361-6022027:-1:exon
so has part: feature:6015426-6015591:-1:exon
so has part: feature:6014069-6014285:-1:exon
so has part: feature:6012367-6012549:-1:exon
so has part: feature:6011179-6011377:-1:exon
so has part: feature:6006532-6008673:-1:exon
so has part: feature:6004919-6005144:-1:exon
so has part: feature:6003819-6004063:-1:exon
so has part: feature:6003459-6003575:-1:exon
so has part: feature:6003158-6003315:-1:exon
so has part: feature:5998562-5998729:-1:exon
so has part: feature:5994077-5994219:-1:exon
so has part: feature:5936419-5936494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6150401-6150427:-1:exon

position:6150401:-1
position: 6150401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6149993-6150094:-1:exon

position:6149993:-1
position: 6149993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6150094:-1
position: 6150094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6140678-6140897:-1:exon

position:6140678:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:6137313-6137382:-1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:6134198-6134378:-1:exon

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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:6126522-6126647:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:6123685-6123880:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:6122595-6122774:-1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:6119702-6119838:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:6118243-6118348:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:6115575-6115753:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:6113259-6113443:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:6112053-6112176:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:6102473-6102674:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:6099493-6099585:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:6095317-6095427:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:6071178-6071292:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:6070557-6070755:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:6068866-6068974:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:6064711-6064824:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:6061016-6061192:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:6058122-6058213:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:6056886-6057105:-1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:6054164-6054298:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:6049459-6049570:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:6045814-6046055:-1:exon

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urn:…
SIO_000300: 29
SIO_000628: feature:6042352-6042452:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:6041144-6041249:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:6038878-6039007:-1:exon

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SIO_000300: 32
SIO_000628: feature:6037295-6037531:-1:exon

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SIO_000300: 33
SIO_000628: feature:6037102-6037202:-1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:6034961-6035255:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:6033436-6033615:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:6030613-6030736:-1:exon

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SIO_000300: 37
SIO_000628: feature:6029762-6029918:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:6026342-6026485:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:6021361-6022027:-1:exon

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urn:…
SIO_000300: 40
SIO_000628: feature:6015426-6015591:-1:exon

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urn:…
SIO_000300: 41
SIO_000628: feature:6014069-6014285:-1:exon

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urn:…
SIO_000300: 42
SIO_000628: feature:6012367-6012549:-1:exon

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urn:…
SIO_000300: 43
SIO_000628: feature:6011179-6011377:-1:exon

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urn:…
SIO_000300: 44
SIO_000628: feature:6006532-6008673:-1:exon

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urn:…
SIO_000300: 45
SIO_000628: feature:6004919-6005144:-1:exon

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urn:…
SIO_000300: 46
SIO_000628: feature:6003819-6004063:-1:exon

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urn:…
SIO_000300: 47
SIO_000628: feature:6003459-6003575:-1:exon

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urn:…
SIO_000300: 48
SIO_000628: feature:6003158-6003315:-1:exon

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urn:…
SIO_000300: 49
SIO_000628: feature:5998562-5998729:-1:exon

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urn:…
SIO_000300: 50
SIO_000628: feature:5994077-5994219:-1:exon

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urn:…
SIO_000300: 51
SIO_000628: feature:5936419-5936494:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109935637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109935637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein axonemal heavy chain 3
translation: MTLKLTLDASQDLPILHSSYTRGLPGLPPLPPNHCSEASELYKTVLRHSRHPPIMQDISWPLAIPFKEQRYYRSPSESIGNNYTPTASNLKIKDLKHASRADKTATAMPACAMRYYSTKAQQPALKKRKLSLRSKITDERDSKSWPRGSGPPGTSGPTPSTMEEIPGSRPMTPVEQINLILEQEEEITQLEGLPSDRDYERYIYYIDHGILPDMIEPQKSEQIDRIEQLLPKELKGVPNLQELHLELLEEVHNDYDTSLRKAIVNYILKDPSERMRLFVSSVPRPFPHRVIRAPVPWHSAYRKAKAWNESHLFIVNPMMTLLQDLWYTKFDNIRFVQLKEIKKENLPMLPQEFEDLVKKQCAETRSILENIWVPTCATLFLTHKDKWMHLVPQNDCDSTQRVKEFFACAASIMSLQLRELVFNSLEDLLSFFTMHKDGNDFGGEYNEMQYVWPQVMILKLKIEEPKIIFDPTLDECWDLINRCFLEILKSAHGILKVECELFPDIREKNLTIHTVKKEESLVSKIINKAQEIFRANIIGPQSYLNVYKVYSDLLNTKAEQEITTFLSEKHSMEAFITKIEALQKLCDEIALMHVTVPLAMFCLDAVSLNADLCARSMKLKETLIESVVKENRNLNMSICQRYEEISDRISEIPETTEELVDLDTFVKKSSEVTITKLKEEIFEAADRLDFLLGYATLSDDDIRLNSQVFNWPEQIVLMLDLHRDRLLSKRDDVEEDLRNRFFFLSNDELLEILSETKDPLRVQPHLKKCFEGIAKLQFTDQLQITGMISSENEIVPIVKLINPAKAKGMVEKWLLQVEEMMLSSIKHVIKEGISNYVQLPRNKWVLQWPGQVVISVSTVYWTSEVSEAIRDGTLPEYLKKSNDQINEIVELVRGKLSSGERMTLGALTVIDVHARDVVSELADAKVASLNDFMWISQLRYYWEENDVIVRMITTVLTYGYEYLGNSARLVITPLTDRCYRTLMGALKLNLGGAPEGPAGTGKTETTKDLAKAVAKQCVVFNCSDGLDYKAMGKFFKGLAQSGAWACFDEFNRIEVEVLSVVAQQILSIQQAIIRHLKTFHFEGTELSLNPTCSVFITMNPGYAGRAELPDNLKALFRTVAMMVPDYALIGEISLYSMGFIDSRSLSQKIVATYRLCSEQLSSQHHYDYGMRAVKSVLTAAGNLKLNFPQENESVLLLQALMDVNLAKFLSQDVPLFQGIISDLFPGVDLPVPEREVFLHALKTNIKKMKLQPVPWFIEKIIQIYEMMLVRHGFMIVGDPLGGKTCAFKVLAAALGDLYAGQLMNEYAVEYAIINPKAVTMGQLYGCFDPVSHEWTDGILATTFRAHATSATNMRKWIVFDGPVDAVWIENMNTVLDDNKKLCLMSGEIIQMSSKMNLIFEPADLEQASPATVSRCGMIYLEPHQLGWTPLKDSYMDTLPATVTAEHKELINDMFHWLIQPCLDFTRLHCKFFVQTSPMHLAYCMMRLYSCLIDEIAQSGKEDNEEMSSQQITLWLQGLFLFATVWAIGATINGESRKKFDVFFRNLILGMDDHNPRPKSVKLTKNNIFPERGSVYDYYFKKTGSGQWTVWTDYITKDQDIPAGAKVSDLIIPTMETARQSFFLHTYISHKVPLLLLGPTGTGKSAITNNFLMHLPKEHYIPNCISLSARTSANQTQDIIMSKLDRRRKGVYGPPVGKESIVFVDDLNMPAKEIYGAQPPIELLRQWIDHGHWYDRKDTSKLTIINVLFISAMGPPGGGRNDITGRFTRHLNIISIDSFDDDTMMKIFTSISDWHFAKGFENTFLRLGKMMVQATMAVYKAAVDNFLPTPSKSHYVFNLRDFSRVIKGVLLCPNTHLKEGDKLIRLWIHEVYRVFYDRLIADDDRQTFFQIIKQTTSNFFKQSVDKVLSHLTPSGKVTDDNIRSLFFGDFLKPDSSVKAYDEIVDLKQLTSVMEYYLSEYNNVSKAPMALVMFRFAIEHISRICRVLKQDNGHLLLVGVGG…
SIO_010081: LOC109935637
subclass of: SO_0000673
so part of: LOC109935637
location: complement(join(5936419..5936494,5994077..5994219,5998562..5998729,6003158..6003315,6003459..6003575,6003819..6004063,6004919..6005144,6006532..6008673,6011179..6011377,6012367..6012549,6014069..6014285,6015426..6015591,6021361..6022027,6026342..6026485,6029762..6029918,6030613..6030736,6033436..6033615,6034961..6035255,6037102..6037202,6037295..6037531,6038878..6039007,6041144..6041249,6042352..6042452,6045814..6046055,6049459..6049570,6054164..6054298,6056886..6057105,6058122..6058213,6061016..6061192,6064711..6064824,6068866..6068974,6070557..6070755,6071178..6071292,6095317..6095427,6099493..6099585,6102473..6102674,6112053..6112176,6113259..6113443,6115575..6115753,6118243..6118348,6119702..6119838,6122595..6122774,6123685..6123880,6126522..6126647,6127440..6127635,6130710..6130899,6134198..6134378,6137313..6137382,6140678..6140897,6149993..6150094,6150401..6150427))
location: region:5936419-6150427:-1
so has part: feature:6150401-6150427:-1:exon
so has part: feature:6149993-6150094:-1:exon
so has part: feature:6140678-6140897:-1:exon
so has part: feature:6137313-6137382:-1:exon
so has part: feature:6134198-6134378:-1:exon
so has part: feature:6130710-6130899:-1:exon
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so has part: feature:6118243-6118348:-1:exon
so has part: feature:6115575-6115753:-1:exon
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so has part: feature:6102473-6102674:-1:exon
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so has part: feature:6095317-6095427:-1:exon
so has part: feature:6071178-6071292:-1:exon
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so has part: feature:6068866-6068974:-1:exon
so has part: feature:6064711-6064824:-1:exon
so has part: feature:6061016-6061192:-1:exon
so has part: feature:6058122-6058213:-1:exon
so has part: feature:6056886-6057105:-1:exon
so has part: feature:6054164-6054298:-1:exon
so has part: feature:6049459-6049570:-1:exon
so has part: feature:6045814-6046055:-1:exon
so has part: feature:6042352-6042452:-1:exon
so has part: feature:6041144-6041249:-1:exon
so has part: feature:6038878-6039007:-1:exon
so has part: feature:6037295-6037531:-1:exon
so has part: feature:6037102-6037202:-1:exon
so has part: feature:6034961-6035255:-1:exon
so has part: feature:6033436-6033615:-1:exon
so has part: feature:6030613-6030736:-1:exon
so has part: feature:6029762-6029918:-1:exon
so has part: feature:6026342-6026485:-1:exon
so has part: feature:6021361-6022027:-1:exon
so has part: feature:6015426-6015591:-1:exon
so has part: feature:6014069-6014285:-1:exon
so has part: feature:6012367-6012549:-1:exon
so has part: feature:6011179-6011377:-1:exon
so has part: feature:6006532-6008673:-1:exon
so has part: feature:6004919-6005144:-1:exon
so has part: feature:6003819-6004063:-1:exon
so has part: feature:6003459-6003575:-1:exon
so has part: feature:6003158-6003315:-1:exon
so has part: feature:5998562-5998729:-1:exon
so has part: feature:5994077-5994219:-1:exon
so has part: feature:5936419-5936494:-1:exon

XP_048465622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6150401-6150427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6149993-6150094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140678-6140897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6137313-6137382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6134198-6134378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6130710-6130899:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6127440-6127635:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6126522-6126647:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6123685-6123880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6122595-6122774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6119702-6119838:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6118243-6118348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6115575-6115753:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6113259-6113443:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6112053-6112176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6102473-6102674:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6099493-6099585:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6095317-6095427:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6071178-6071292:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6070557-6070755:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6068866-6068974:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6064711-6064824:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6061016-6061192:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6058122-6058213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6056886-6057105:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6054164-6054298:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6049459-6049570:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6045814-6046055:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6042352-6042452:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6041144-6041249:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6038878-6039007:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6037295-6037531:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6037102-6037202:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6034961-6035255:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6033436-6033615:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6030613-6030736:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6029762-6029918:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6026342-6026485:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6021361-6022027:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6015426-6015591:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:6014069-6014285:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:6012367-6012549:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:6011179-6011377:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:6006532-6008673:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:6004919-6005144:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:6003819-6004063:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:6003459-6003575:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:6003158-6003315:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:5998562-5998729:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:5994077-5994219:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:5936419-5936494:-1:exon

lyrm1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: lyrm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6078707..6092731
location: region:6078707-6092731:1
so has part: feature:6078707-6092731:1:exon
subclass of: SO_0000010

109935566
type: Gene
SIO_000068: ncbigene

position:6078707:1
position: 6078707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition