Rhincodon typus isolate 14 chromosome 20, sRhiTyp1.1, whole genome shotgun sequence.
type: Entry
definition: Rhincodon typus isolate 14 chromosome 20, sRhiTyp1.1, whole genome shotgun sequence.
sequence version: NC_063351.1
sequence date: 2022-06-09
sequence: sequence
division: CON
label: NC_063351.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA842712
dblink: SAMN19519256
keyword: WGS
keyword: RefSeq
source: Rhincodon typus (whale shark)
organism: Rhincodon typus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038817.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 52588957
topology: linear
so has quality: SO_0000987
location: 1..52588957
location: region:1-52588957:1
RO_0002162: 259920

NC_063351
type: RefSeq
SIO_000068: refseq

PRJNA842712
type: BioProject
SIO_000068: bioproject

SAMN19519256
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52588957:1
position: 52588957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-52588957:1:source
so part of: sequence
organism: Rhincodon typus
mol type: genomic DNA
isolate: 14
chromosome: 20
sex: male
tissue type: blood
dev stage: adult
collected by: 2018-05-24

259920
type: Taxonomy
SIO_000068: taxonomy

LOC125485605
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 160500..162441
location: region:160500-162441:1
so has part: feature:160500-162441:1:exon
subclass of: SO_0000010

125485605
type: Gene
SIO_000068: ncbigene

position:160500:1
position: 160500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162441:1
position: 162441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160500-162441:1:exon

LOC125485605
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485605
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_048609144.1
SIO_010081: LOC125485605
subclass of: SO_0000673
so part of: LOC125485605
location: join(160500..160530,161531..162441)
location: region:160500-162441:1
so has part: feature:160500-160530:1:exon
so has part: feature:161531-162441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160500-160530:1:exon

position:160530:1
position: 160530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161531-162441:1:exon

position:161531:1
position: 161531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125485605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MAVTDLLVLITAVVLNRISVIYFPVLFLSTTPVCSLKITVIYIVRDCSVWLTVVFTIDRFIAICCQNFKAKYCTKKMATVVIGIVCTVSCVKNFPWYFVYEPLYLVNGVPWYCNIKLSFYTELAWTAFDWVDRILNPCSPFLIMLILNFLTVRNIVLANKARKRLRLQTIRENQIDPEMESRRKSIILLFTISGSFLLLWMTYVINFLYVRFTNSNYSTGSTGNNPRFILQEGGNMLQLLSCCTNTCIYAATQSKFREEFKNALKYPLKWIIKIFKL
SIO_010081: LOC125485605
subclass of: SO_0000673
so part of: LOC125485605
location: 161608..162441
location: region:161608-162441:1
so has part: feature:161608-162441:1:exon

XP_048465101.1
type: Protein
SIO_000068: ncbiprotein

position:161608:1
position: 161608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161608-162441:1:exon

LOC125485606
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182030..182856
location: region:182030-182856:1
so has part: feature:182030-182856:1:exon
subclass of: SO_0000010

125485606
type: Gene
SIO_000068: ncbigene

position:182030:1
position: 182030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182856:1
position: 182856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182030-182856:1:exon

LOC125485606
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485606
product: FMRFamide receptor-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048609145.1
SIO_010081: LOC125485606
subclass of: SO_0000673
so part of: LOC125485606
location: 182030..182856
location: region:182030-182856:1
so has part: feature:182030-182856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182030-182856:1:exon

LOC125485606
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485606
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: FMRFamide receptor-like
translation: MAVTDRLVIITAVLLNRIPAIYFPGSFLSIAPVCSLSIALIYTSRDTSVYLTVAVTFERFVAICCQKLKRKYCTEKVAGIVVXNVCTLGCFINIPWYFMHEPIYVTSNTPWYCKLKEMRYTSFIWAAFHWIDRIVNPCLPFFLIIFLNVLTVRSILAASGIRKRLRARSNRENQSDPELESRRRSIILRFTISGSFILLWTTYVAYFFFERFMKDYKFKDFNDPKFIFLESANMLQLLSCCTNTFIYAVTQNKFREKLKNLLIHPFIIICTLFKK
SIO_010081: LOC125485606
subclass of: SO_0000673
so part of: LOC125485606
location: 182030..182856
location: region:182030-182856:1
so has part: feature:182030-182856:1:exon

XP_048465102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182030-182856:1:exon

ccar1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ccar1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 201665..287898
location: region:201665-287898:1
so has part: feature:201665-287898:1:exon
subclass of: SO_0000010

109921373
type: Gene
SIO_000068: ncbigene

position:201665:1
position: 201665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287898:1
position: 287898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201665-287898:1:exon

ccar1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ccar1
product: cell division cycle and apoptosis regulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048609146.1
SIO_010081: ccar1
subclass of: SO_0000673
so part of: ccar1
location: join(201665..201719,203827..203945,204878..205041,210227..210271,212999..213031,214203..214390,222110..222224,223844..224021,225036..225165,229911..230072,235304..235529,237945..238058,254532..254698,255527..255737,256691..256774,265688..265873,266660..266851,267852..268106,270630..270768,280198..280286,282544..282684,283554..283674,287693..287898)
location: region:201665-287898:1
so has part: feature:201665-201719:1:exon
so has part: feature:203827-203945:1:exon
so has part: feature:204878-205041:1:exon
so has part: feature:210227-210271:1:exon
so has part: feature:212999-213031:1:exon
so has part: feature:214203-214390:1:exon
so has part: feature:222110-222224:1:exon
so has part: feature:223844-224021:1:exon
so has part: feature:225036-225165:1:exon
so has part: feature:229911-230072:1:exon
so has part: feature:235304-235529:1:exon
so has part: feature:237945-238058:1:exon
so has part: feature:254532-254698:1:exon
so has part: feature:255527-255737:1:exon
so has part: feature:256691-256774:1:exon
so has part: feature:265688-265873:1:exon
so has part: feature:266660-266851:1:exon
so has part: feature:267852-268106:1:exon
so has part: feature:270630-270768:1:exon
so has part: feature:280198-280286:1:exon
so has part: feature:282544-282684:1:exon
so has part: feature:283554-283674:1:exon
so has part: feature:287693-287898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201665-201719:1:exon

position:201719:1
position: 201719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203827-203945:1:exon

position:203827:1
position: 203827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203945:1
position: 203945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204878-205041:1:exon

position:204878:1
position: 204878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205041:1
position: 205041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210227-210271:1:exon

position:210227:1
position: 210227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210271:1
position: 210271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212999-213031:1:exon

position:212999:1
position: 212999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213031:1
position: 213031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:214203-214390:1:exon

position:214203:1
position: 214203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214390:1
position: 214390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:222110-222224:1:exon

position:222110:1
position: 222110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222224:1
position: 222224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:223844-224021:1:exon

position:223844:1
position: 223844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224021:1
position: 224021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:225036-225165:1:exon

position:225036:1
position: 225036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225165:1
position: 225165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:229911-230072:1:exon

position:229911:1
position: 229911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230072:1
position: 230072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:235304-235529:1:exon

position:235304:1
position: 235304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235529:1
position: 235529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:237945-238058:1:exon

position:237945:1
position: 237945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238058:1
position: 238058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:254532-254698:1:exon

position:254532:1
position: 254532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254698:1
position: 254698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:255527-255737:1:exon

position:255527:1
position: 255527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255737:1
position: 255737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:256691-256774:1:exon

position:256691:1
position: 256691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256774:1
position: 256774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:265688-265873:1:exon

position:265688:1
position: 265688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265873:1
position: 265873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:266660-266851:1:exon

position:266660:1
position: 266660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266851:1
position: 266851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:267852-268106:1:exon

position:267852:1
position: 267852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268106:1
position: 268106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:270630-270768:1:exon

position:270630:1
position: 270630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270768:1
position: 270768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:280198-280286:1:exon

position:280198:1
position: 280198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280286:1
position: 280286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:282544-282684:1:exon

position:282544:1
position: 282544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282684:1
position: 282684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:283554-283674:1:exon

position:283554:1
position: 283554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283674:1
position: 283674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:287693-287898:1:exon

position:287693:1
position: 287693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ccar1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ccar1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle and apoptosis regulator protein 1
translation: MAQFGGQKNPPWTTQFSAAVTQPGALGVQPSLLGASPAMYTQQPALAAAGLTTQTPSGYQLTQSAALQQQAAAVALQQQYQQPQQTIYSVQQQLQQPPQALLPQPAVALPTSLNAPQTTAQITVSYPTPRATQQQTQPQKQRVFTGVVTKLHDTFGFVDEDVFFQLSAVKGKAPQVGDRVLVEAAYNPNMPFKWNAQRIQTLPNQSQTQPLIKTPPTVMQPLTQQPYGVPPQPQSLLQASMAAAPLTPLLSAQPQPLLQQPQQKPGLLQPPVRVIPQPQAVRRIEPPSRFMTRNERLEITLTRKDDRSRERDRDRRRSRERSPQRKRSRERSPRRERDRSPRRQRRVVPRYTVQFSKFSLDCTSCDMMELRRRYQNLYIPSDFFDTQFTWVDAFLLNRPFQLGNQCNFHIVHKEVDPLEKMTAILDPPDADHLYSAKVMLLASPGMDELFHKSCALAEDSQEIREGYQHPARLIKFLVGMKGKDEAMAIGGHWSPSLDGPNPETDPSVLIRTAIRCCKALTSIDLSGCTQWYRFAEIRYHRPEEHHKGRTVPAHVETVVIFLPDVWHCLPTRSEWEALSRGYKQQLVEKLQAEHKEADGEQEEEEKDDGESKEISTPTHWSKLDPKTMKVNDLRKELESRNQSSKGLKSQLIARLTKQLKTEAEKEEQKESEKSEREDDDEDDKRSEDDKEEEERKRQEEVERQRRERRYILPDEPSIIVHPNWTAKGGKFDCSVMSLSVLLDYRLEDNKEHSFEVSLFAELFNEMLQRDFGYRIYKALVTVPEKDDKKEKDKKDRKEEKKESEKREKKEEKDEESIEPKTKRRKSGDEKDKKEERDGRKKEDKDKDDKNLRKRDDFKEDEEMEDGTNPDDYDPLDAEDAEDEDDEDRDEEESDRDRKDDRVEGTRRSRENISKEKEKKQLFTHNKDLLLAFVYFDQSYCGFLLEKDLEEIIYTLGLHLSRAQVKKLISKVVLRDSCLYRKLTDGSKDEVKVTESEVESDHLLGNKLLLPSLTVKPESSNGSESSNLIVYNGAMVDVGSLLQKLQKSEKTRAEMELKVQSLEGKMGKKTGG
SIO_010081: ccar1
subclass of: SO_0000673
so part of: ccar1
location: join(203876..203945,204878..205041,210227..210271,212999..213031,214203..214390,222110..222224,223844..224021,225036..225165,229911..230072,235304..235529,237945..238058,254532..254698,255527..255737,256691..256774,265688..265873,266660..266851,267852..268106,270630..270768,280198..280286,282544..282684,283554..283674,287693..287898)
location: region:203876-287898:1
so has part: feature:203876-203945:1:exon
so has part: feature:204878-205041:1:exon
so has part: feature:210227-210271:1:exon
so has part: feature:212999-213031:1:exon
so has part: feature:214203-214390:1:exon
so has part: feature:222110-222224:1:exon
so has part: feature:223844-224021:1:exon
so has part: feature:225036-225165:1:exon
so has part: feature:229911-230072:1:exon
so has part: feature:235304-235529:1:exon
so has part: feature:237945-238058:1:exon
so has part: feature:254532-254698:1:exon
so has part: feature:255527-255737:1:exon
so has part: feature:256691-256774:1:exon
so has part: feature:265688-265873:1:exon
so has part: feature:266660-266851:1:exon
so has part: feature:267852-268106:1:exon
so has part: feature:270630-270768:1:exon
so has part: feature:280198-280286:1:exon
so has part: feature:282544-282684:1:exon
so has part: feature:283554-283674:1:exon
so has part: feature:287693-287898:1:exon

XP_048465103.1
type: Protein
SIO_000068: ncbiprotein

position:203876:1
position: 203876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203876-203945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204878-205041:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210227-210271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212999-213031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214203-214390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222110-222224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223844-224021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225036-225165:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:229911-230072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235304-235529:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237945-238058:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:254532-254698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255527-255737:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256691-256774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:265688-265873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:266660-266851:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267852-268106:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:270630-270768:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:280198-280286:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:282544-282684:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:283554-283674:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:287693-287898:1:exon

LOC125485628
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485628
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 230552..230618
location: region:230552-230618:1
so has part: feature:230552-230618:1:exon
subclass of: SO_0000578

125485628
type: Gene
SIO_000068: ncbigene

position:230552:1
position: 230552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230618:1
position: 230618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230552-230618:1:exon

LOC125485628
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: snoRNA
gene: LOC125485628
product: small nucleolar RNA SNORD98
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00607
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007264324.1
SIO_010081: LOC125485628
subclass of: SO_0000673
so part of: LOC125485628
location: 230552..230618
location: region:230552-230618:1
so has part: feature:230552-230618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230552-230618:1:exon

stox1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: stox1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 318828..338482
location: region:318828-338482:1
so has part: feature:318828-338482:1:exon
subclass of: SO_0000010

109937681
type: Gene
SIO_000068: ncbigene

position:318828:1
position: 318828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338482:1
position: 338482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318828-338482:1:exon

stox1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: stox1
product: storkhead box 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048609001.1
SIO_010081: stox1
subclass of: SO_0000673
so part of: stox1
location: join(318828..319139,326565..326717,331841..334145,338172..338482)
location: region:318828-338482:1
so has part: feature:318828-319139:1:exon
so has part: feature:326565-326717:1:exon
so has part: feature:331841-334145:1:exon
so has part: feature:338172-338482:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318828-319139:1:exon

position:319139:1
position: 319139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326565-326717:1:exon

position:326565:1
position: 326565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326717:1
position: 326717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:331841-334145:1:exon

position:331841:1
position: 331841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334145:1
position: 334145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:338172-338482:1:exon

position:338172:1
position: 338172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

stox1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: stox1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: storkhead-box protein 1
translation: MTVQLTQSSLAMVLGLREATSGLDMSGQQLLAELKAENRRSVWDGRLVQAVSGLMLLGYLDSSVLLLGGSASHLQVLREAWSRRALRAPRGFRIKAIGDAPAIPMKPIPQSQFVPLAEVLCCVISEMNANRTVVTQEALLEYLVECYPGIATPSQEIVHSALGSLIQDRKIYHTGEGYFIVTPHTYFITGSTGKQRQPWMLCEKTAASIDRITYLVNVESSQEPLRKDKVLPDGVPHCKSCRCFSQPEEEQQAEPQFCKSSPGQRSCKEHKPAVQHRATSTVNGPCRAKEKGNPIGKLSLSLFRRKKKKESPKRVYGTFSAQFPPEEWPVRDENSVRNIPRDVEHQLIKRINPGLTVENLVRHTLLMKKLSRESTAQCHSSGSLDQLIGKQRHHSKENPQNTAAKLQPQQRRVRSSREQKRRRLKGSLQPTEDLPKTRNGPNVKELDKHRSEGVQTLHEELPSQACRSRTPTKHSHQKRIDGSFTKIKCYHAQNATINNPRVRRRSQSLDSFARAQDTILGRESAPEKSQPNTAVYLRPAEEDNEEQLRSHDARIECRNQVLSCYNIPCESHDCLNKNQTPGSPQNIHTSNYMLACAQQYHQEQETEKFSNVTRPEVSHEYEDSSVPQALCDRISKQGQNPTTSTTVKCVSVERLSSLSHLSDAQLVSLEQAHQPEGETASQPETDEGQSEVFTDEDQTLYQRELEEDDACSSLYLDDTELSIHLPGLDYADEPGSEGVPSELSSESWVLSKILLQEEQTAESEFAEQQVGSWLKGASDSSMGQSTPCCGKEPHSPFCRYQPMIPLPYEHLEKEEPPSGCRDLISSIFDFSNMTVANSSPETLCTSSNEGTRNPTSQDLWAGHPRMKTQLMRNLDRNQFPHHTHSTALPQTSQDDNTHLELLENYSITEDSGIDSPRTRVSLASNNSIILDSLKRRSLMQNYGTLNSTGQNGVLSQHPLLQLTPVMNV
SIO_010081: stox1
subclass of: SO_0000673
so part of: stox1
location: join(318848..319139,326565..326717,331841..334145,338172..338328)
location: region:318848-338328:1
so has part: feature:318848-319139:1:exon
so has part: feature:326565-326717:1:exon
so has part: feature:331841-334145:1:exon
so has part: feature:338172-338328:1:exon

XP_048464958.1
type: Protein
SIO_000068: ncbiprotein

position:318848:1
position: 318848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338328:1
position: 338328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318848-319139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326565-326717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:331841-334145:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:338172-338328:1:exon

ddx21
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ddx21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 368274..408184
location: region:368274-408184:1
so has part: feature:368274-408184:1:exon
subclass of: SO_0000010

109910695
type: Gene
SIO_000068: ncbigene

position:368274:1
position: 368274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408184:1
position: 408184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368274-408184:1:exon

ddx21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ddx21
product: DEAD (Asp-Glu-Ala-Asp) box helicase 21
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608689.1
SIO_010081: ddx21
subclass of: SO_0000673
so part of: ddx21
location: join(368274..368468,368688..368951,370184..370259,372675..372853,374113..374230,381991..382176,383414..383559,394062..394211,394921..395082,395553..395672,397262..397335,397902..398061,403938..404072,407326..407370,407755..408184)
location: region:368274-408184:1
so has part: feature:368274-368468:1:exon
so has part: feature:368688-368951:1:exon
so has part: feature:370184-370259:1:exon
so has part: feature:372675-372853:1:exon
so has part: feature:374113-374230:1:exon
so has part: feature:381991-382176:1:exon
so has part: feature:383414-383559:1:exon
so has part: feature:394062-394211:1:exon
so has part: feature:394921-395082:1:exon
so has part: feature:395553-395672:1:exon
so has part: feature:397262-397335:1:exon
so has part: feature:397902-398061:1:exon
so has part: feature:403938-404072:1:exon
so has part: feature:407326-407370:1:exon
so has part: feature:407755-408184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368274-368468:1:exon

position:368468:1
position: 368468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368688-368951:1:exon

position:368688:1
position: 368688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368951:1
position: 368951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370184-370259:1:exon

position:370184:1
position: 370184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370259:1
position: 370259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:372675-372853:1:exon

position:372675:1
position: 372675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372853:1
position: 372853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:374113-374230:1:exon

position:374113:1
position: 374113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374230:1
position: 374230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:381991-382176:1:exon

position:381991:1
position: 381991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382176:1
position: 382176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:383414-383559:1:exon

position:383414:1
position: 383414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383559:1
position: 383559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:394062-394211:1:exon

position:394062:1
position: 394062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394211:1
position: 394211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:394921-395082:1:exon

position:394921:1
position: 394921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395082:1
position: 395082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:395553-395672:1:exon

position:395553:1
position: 395553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395672:1
position: 395672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:397262-397335:1:exon

position:397262:1
position: 397262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397335:1
position: 397335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:397902-398061:1:exon

position:397902:1
position: 397902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398061:1
position: 398061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:403938-404072:1:exon

position:403938:1
position: 403938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404072:1
position: 404072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:407326-407370:1:exon

position:407326:1
position: 407326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407370:1
position: 407370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:407755-408184:1:exon

position:407755:1
position: 407755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ddx21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ddx21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar RNA helicase 2
translation: MPARLSLQSEDPEPTMEAESVSRKSHKKSKKEKRKHSERSEDKKARSWENGELNEDSTGESELKPPKAKRHRSEDNEGRDDRKGHRTEKNGVIKESKQKTAPRSSDDSSQYSEGEIEEELTPEQKEGAFSNFRISQETIELLKERGVTYLFPIQARTFNYIYDGNDCVAQARTGTGKTFSFAIPLVEKLQSEAVDRRRNRPPKVLVLAPTRELAIQVAKDFKDVTKKLVVSCFYGGTAYVGQMDSIRNGIDILVGTPGRIRDHLQNMKIDLSKLKHVVLDEVDQMLDMGFAEQVEDILKVAYKKDSKDNPQTLLFSATCPPWVYQVAKKYMRAQYKQVDLIGKRTQRAATTVEHLAIECHWTQRAAVIGDVIQVYSGSHGRTIIFCETKKEVNELVMNNSIKQDAQCLHGDIPQKQREITLKGFRDGSFEVLVATNVAARGLDIPEVDLVIQGCPPKDVDSYIHRSGRTGRAGRTGICICFYQRKEEDDLRFVEHQAGVTFKRVGVPTAADIVEASCKDAVRSLDSIPAAAIERFRPAAESLIEQRGALQALAAALAHISGARSIEQRSLLNSDAGYTTMVLACSTEIHSLNYAWRGLKEQLGETVESKVKRMRFLKGKMGVCFDIPEDSLETLKGSWQDNRRWQLTVATKLPELEEERRDGGSKYRKRSFNRGGGGFNKSQNGRSMKRNFSRAFDW
SIO_010081: ddx21
subclass of: SO_0000673
so part of: ddx21
location: join(368379..368468,368688..368951,370184..370259,372675..372853,374113..374230,381991..382176,383414..383559,394062..394211,394921..395082,395553..395672,397262..397335,397902..398061,403938..404072,407326..407370,407755..407943)
location: region:368379-407943:1
so has part: feature:368379-368468:1:exon
so has part: feature:368688-368951:1:exon
so has part: feature:370184-370259:1:exon
so has part: feature:372675-372853:1:exon
so has part: feature:374113-374230:1:exon
so has part: feature:381991-382176:1:exon
so has part: feature:383414-383559:1:exon
so has part: feature:394062-394211:1:exon
so has part: feature:394921-395082:1:exon
so has part: feature:395553-395672:1:exon
so has part: feature:397262-397335:1:exon
so has part: feature:397902-398061:1:exon
so has part: feature:403938-404072:1:exon
so has part: feature:407326-407370:1:exon
so has part: feature:407755-407943:1:exon

XP_048464646.1
type: Protein
SIO_000068: ncbiprotein

position:368379:1
position: 368379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407943:1
position: 407943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368379-368468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368688-368951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370184-370259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372675-372853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374113-374230:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:381991-382176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383414-383559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394062-394211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:394921-395082:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395553-395672:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397262-397335:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397902-398061:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403938-404072:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:407326-407370:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:407755-407943:1:exon

kifbp
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: kifbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 440057..463117
location: region:440057-463117:1
so has part: feature:440057-463117:1:exon
subclass of: SO_0000010

109910742
type: Gene
SIO_000068: ncbigene

position:440057:1
position: 440057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463117:1
position: 463117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440057-463117:1:exon

kifbp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: kifbp
product: kinesin family binding protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609147.1
SIO_010081: kifbp
subclass of: SO_0000673
so part of: kifbp
location: join(440057..440068,441371..441450,455897..456080,457965..458058,458438..458550,462142..463117)
location: region:440057-463117:1
so has part: feature:440057-440068:1:exon
so has part: feature:441371-441450:1:exon
so has part: feature:455897-456080:1:exon
so has part: feature:457965-458058:1:exon
so has part: feature:458438-458550:1:exon
so has part: feature:462142-463117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440057-440068:1:exon

position:440068:1
position: 440068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441371-441450:1:exon

position:441371:1
position: 441371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441450:1
position: 441450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:455897-456080:1:exon

position:455897:1
position: 455897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456080:1
position: 456080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:457965-458058:1:exon

position:457965:1
position: 457965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458058:1
position: 458058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:458438-458550:1:exon

position:458438:1
position: 458438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458550:1
position: 458550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:462142-463117:1:exon

position:462142:1
position: 462142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kifbp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: kifbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KIF-binding protein
translation: MAVQVGIPPLDTHEHFLGEEERLTEQERHKRFEKVYTHTLYYLAQVYKHLDMNEKAAWYCHTTLQRQLQFTHYNPVEWAINAATLSQYYITKQLYMEGRLCLAAASVIFNQAGGTSSESPAEESEEERDHRDQLQQKKAEIARCWIKYCLNLLQDSRKLLEDDVGEMDYDRQEELKIRLKKEEEEKEQGRKSAVMFGSSETFDLIQSVEEKVSCIYPVDFSNARDVFLVGQNYVQEAKEFFQLDDHVTDHIEVVQDHSALFKVLAFFEEDQERRCKMHKRRIDMLEAVYAELNPQYYLLVCRQLQFEIADTYYEMMELKVSIANRLDELDSHNIKKINHLAQSAVTYYTLFLDSLKNSEKKFPEKLEADVLRPALVCKFRIGWLYSKMITSDPKLQLTNLQQSVECYRFVVDYCETHPEATKVMEPELELCVEMATLLPARMEKLKAKIVAFS
SIO_010081: kifbp
subclass of: SO_0000673
so part of: kifbp
location: join(440057..440068,441371..441450,455897..456080,457965..458058,458438..458550,462142..463020)
location: region:440057-463020:1
so has part: feature:440057-440068:1:exon
so has part: feature:441371-441450:1:exon
so has part: feature:455897-456080:1:exon
so has part: feature:457965-458058:1:exon
so has part: feature:458438-458550:1:exon
so has part: feature:462142-463020:1:exon

XP_048465104.1
type: Protein
SIO_000068: ncbiprotein

position:463020:1
position: 463020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440057-440068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441371-441450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455897-456080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457965-458058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:458438-458550:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462142-463020:1:exon

vps26a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: vps26a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 577897..640801
location: region:577897-640801:1
so has part: feature:577897-640801:1:exon
subclass of: SO_0000010

109910703
type: Gene
SIO_000068: ncbigene

position:577897:1
position: 577897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640801:1
position: 640801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577897-640801:1:exon

vps26a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: vps26a
product: VPS26, retromer complex component A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020509950.2
SIO_010081: vps26a
subclass of: SO_0000673
so part of: vps26a
location: join(577897..577998,596667..596816,605897..605972,607879..608035,624866..625030,631600..631706,631807..631875,636489..636631,639749..640801)
location: region:577897-640801:1
so has part: feature:577897-577998:1:exon
so has part: feature:596667-596816:1:exon
so has part: feature:605897-605972:1:exon
so has part: feature:607879-608035:1:exon
so has part: feature:624866-625030:1:exon
so has part: feature:631600-631706:1:exon
so has part: feature:631807-631875:1:exon
so has part: feature:636489-636631:1:exon
so has part: feature:639749-640801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577897-577998:1:exon

position:577998:1
position: 577998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:596667-596816:1:exon

position:596667:1
position: 596667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596816:1
position: 596816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:605897-605972:1:exon

position:605897:1
position: 605897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605972:1
position: 605972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:607879-608035:1:exon

position:607879:1
position: 607879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608035:1
position: 608035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:624866-625030:1:exon

position:624866:1
position: 624866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625030:1
position: 625030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:631600-631706:1:exon

position:631600:1
position: 631600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631706:1
position: 631706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:631807-631875:1:exon

position:631807:1
position: 631807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631875:1
position: 631875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636489-636631:1:exon

position:636489:1
position: 636489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636631:1
position: 636631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:639749-640801:1:exon

position:639749:1
position: 639749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vps26a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: vps26a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 26A
translation: MSFLGGLFTPVCDINIVLNDADTRKTAEIKSEDGKIEKHYLFYDGESVTGKVNLTFKQPGKRLEHKGIRIEFVGQIELFSDKSNTHEFVNLVKELALPGELTQSRTYEFEFMQVEKPYESYIGANVRLRYFLRVTIVRSLSDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDLTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIVLWRKAPEKLRKRTNFHQRLESPEPQASAQQPEI
SIO_010081: vps26a
subclass of: SO_0000673
so part of: vps26a
location: join(577996..577998,596667..596816,605897..605972,607879..608035,624866..625030,631600..631706,631807..631875,636489..636631,639749..639859)
location: region:577996-639859:1
so has part: feature:577996-577998:1:exon
so has part: feature:596667-596816:1:exon
so has part: feature:605897-605972:1:exon
so has part: feature:607879-608035:1:exon
so has part: feature:624866-625030:1:exon
so has part: feature:631600-631706:1:exon
so has part: feature:631807-631875:1:exon
so has part: feature:636489-636631:1:exon
so has part: feature:639749-639859:1:exon

XP_020365539.1
type: Protein
SIO_000068: ncbiprotein

position:577996:1
position: 577996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639859:1
position: 639859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577996-577998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596667-596816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605897-605972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607879-608035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:624866-625030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631600-631706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631807-631875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636489-636631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:639749-639859:1:exon

supv3l1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: supv3l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 647002..700517
location: region:647002-700517:1
so has part: feature:647002-700517:1:exon
subclass of: SO_0000010

109924815
type: Gene
SIO_000068: ncbigene

position:647002:1
position: 647002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700517:1
position: 700517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647002-700517:1:exon

supv3l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: supv3l1
product: SUV3-like helicase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608738.1
SIO_010081: supv3l1
subclass of: SO_0000673
so part of: supv3l1
location: join(647002..647244,655765..655842,656749..656856,667053..667167,669773..669941,672162..672273,674503..674580,675099..675190,678070..678250,685713..685806,686164..686383,691258..691338,691475..691651,693085..693233,699958..700517)
location: region:647002-700517:1
so has part: feature:647002-647244:1:exon
so has part: feature:655765-655842:1:exon
so has part: feature:656749-656856:1:exon
so has part: feature:667053-667167:1:exon
so has part: feature:669773-669941:1:exon
so has part: feature:672162-672273:1:exon
so has part: feature:674503-674580:1:exon
so has part: feature:675099-675190:1:exon
so has part: feature:678070-678250:1:exon
so has part: feature:685713-685806:1:exon
so has part: feature:686164-686383:1:exon
so has part: feature:691258-691338:1:exon
so has part: feature:691475-691651:1:exon
so has part: feature:693085-693233:1:exon
so has part: feature:699958-700517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647002-647244:1:exon

position:647244:1
position: 647244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655765-655842:1:exon

position:655765:1
position: 655765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655842:1
position: 655842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656749-656856:1:exon

position:656749:1
position: 656749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656856:1
position: 656856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:667053-667167:1:exon

position:667053:1
position: 667053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667167:1
position: 667167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:669773-669941:1:exon

position:669773:1
position: 669773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669941:1
position: 669941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:672162-672273:1:exon

position:672162:1
position: 672162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672273:1
position: 672273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:674503-674580:1:exon

position:674503:1
position: 674503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674580:1
position: 674580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:675099-675190:1:exon

position:675099:1
position: 675099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675190:1
position: 675190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:678070-678250:1:exon

position:678070:1
position: 678070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678250:1
position: 678250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:685713-685806:1:exon

position:685713:1
position: 685713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685806:1
position: 685806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:686164-686383:1:exon

position:686164:1
position: 686164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686383:1
position: 686383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:691258-691338:1:exon

position:691258:1
position: 691258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691338:1
position: 691338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:691475-691651:1:exon

position:691475:1
position: 691475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691651:1
position: 691651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:693085-693233:1:exon

position:693085:1
position: 693085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693233:1
position: 693233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:699958-700517:1:exon

position:699958:1
position: 699958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

supv3l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: supv3l1
product: SUV3-like helicase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608739.1
SIO_010081: supv3l1
subclass of: SO_0000673
so part of: supv3l1
location: join(647002..647244,655765..655842,656749..656856,667053..667167,669773..669941,672162..672273,674503..674580,675099..675190,678070..678250,685713..685806,686164..686383,691475..691651,693085..693233,699958..700517)
location: region:647002-700517:1
so has part: feature:647002-647244:1:exon
so has part: feature:655765-655842:1:exon
so has part: feature:656749-656856:1:exon
so has part: feature:667053-667167:1:exon
so has part: feature:669773-669941:1:exon
so has part: feature:672162-672273:1:exon
so has part: feature:674503-674580:1:exon
so has part: feature:675099-675190:1:exon
so has part: feature:678070-678250:1:exon
so has part: feature:685713-685806:1:exon
so has part: feature:686164-686383:1:exon
so has part: feature:691475-691651:1:exon
so has part: feature:693085-693233:1:exon
so has part: feature:699958-700517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647002-647244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655765-655842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656749-656856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667053-667167:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669773-669941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672162-672273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674503-674580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675099-675190:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678070-678250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685713-685806:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686164-686383:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:691475-691651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:693085-693233:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:699958-700517:1:exon

supv3l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: supv3l1
product: SUV3-like helicase, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608740.1
SIO_010081: supv3l1
subclass of: SO_0000673
so part of: supv3l1
location: join(647002..647244,655765..655842,667053..667167,669773..669941,672162..672273,674503..674580,675099..675190,678070..678250,685713..685806,686164..686383,691258..691338,691475..691651,693085..693233,699958..700517)
location: region:647002-700517:1
so has part: feature:647002-647244:1:exon
so has part: feature:655765-655842:1:exon
so has part: feature:667053-667167:1:exon
so has part: feature:669773-669941:1:exon
so has part: feature:672162-672273:1:exon
so has part: feature:674503-674580:1:exon
so has part: feature:675099-675190:1:exon
so has part: feature:678070-678250:1:exon
so has part: feature:685713-685806:1:exon
so has part: feature:686164-686383:1:exon
so has part: feature:691258-691338:1:exon
so has part: feature:691475-691651:1:exon
so has part: feature:693085-693233:1:exon
so has part: feature:699958-700517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647002-647244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655765-655842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667053-667167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669773-669941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672162-672273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:674503-674580:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:675099-675190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678070-678250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:685713-685806:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:686164-686383:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:691258-691338:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:691475-691651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:693085-693233:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:699958-700517:1:exon

supv3l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: supv3l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X1
translation: MWLNRSFRLLGLVPGPLRAAGRRMVRGSGSKGPDTSLFVPLSPRVSPGPEGNVGAELSRDLDKGEALKVLNKFYKRKEMQRLGSENGLDARLFHQAFISFRKYVMEAESLSVDLHIILNDICCGAGHVDDLFPYFLRHAKQVFPMLDCMEDLRKISDLRLPANWYPEARAIQRKIIFHAGPTNSGKTHHAIQRFLAANSGVYCGPLKLLAHEIYQKSNDAGVPCDLVTGEERSFVDPDGRQSAHVACTIEMCSVTTPYEIAVIDEIQMIKDPSRGWAWTRALLGLCAEEIHICGEAAAINLVMELMFDTGEEVEVESYERLTPMTVLDTALESLDNLHPGDCIVCFSKSDIYSLSRQIEARGLECAVIYGSLPPGTKLAQAKKFNDPDDPCKIMVATDAIGMGLNLSIKRIIFNSLVKPNINEKGEKEMDRITTSQALQIAGRAGRFRSAFKEGEVTTMNRDDLPVLQEILSKTVEPIEAAGLHPTADQIEMFAYQLPDATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQHIPLNLRVRYVFCTAPINRKHPFVCTSFLKFARQFSRNEPLTFEWLCRHINWPLVPPKNIKDLVHLEAVHDVLDLYLWLSYRFMDMFPDVSLVREIQIELDSIIQIGVKNITRLIRASDSISTTIAAGAEDASVHGGTWTNERINMEDVNSKGQVYIGSRRIRGSKTLGYRAEDYKAEIPGKAGDSLSARLVQQGHLTAELLQQLQEEWAASHGLQTPRNATTQEPSKITSKGLRKKKK
SIO_010081: supv3l1
subclass of: SO_0000673
so part of: supv3l1
location: join(647055..647244,655765..655842,656749..656856,667053..667167,669773..669941,672162..672273,674503..674580,675099..675190,678070..678250,685713..685806,686164..686383,691258..691338,691475..691651,693085..693233,699958..700438)
location: region:647055-700438:1
so has part: feature:647055-647244:1:exon
so has part: feature:655765-655842:1:exon
so has part: feature:656749-656856:1:exon
so has part: feature:667053-667167:1:exon
so has part: feature:669773-669941:1:exon
so has part: feature:672162-672273:1:exon
so has part: feature:674503-674580:1:exon
so has part: feature:675099-675190:1:exon
so has part: feature:678070-678250:1:exon
so has part: feature:685713-685806:1:exon
so has part: feature:686164-686383:1:exon
so has part: feature:691258-691338:1:exon
so has part: feature:691475-691651:1:exon
so has part: feature:693085-693233:1:exon
so has part: feature:699958-700438:1:exon

XP_048464695.1
type: Protein
SIO_000068: ncbiprotein

position:647055:1
position: 647055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700438:1
position: 700438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647055-647244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655765-655842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656749-656856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667053-667167:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669773-669941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672162-672273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674503-674580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675099-675190:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678070-678250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685713-685806:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686164-686383:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:691258-691338:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:691475-691651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:693085-693233:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:699958-700438:1:exon

supv3l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: supv3l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X2
translation: MWLNRSFRLLGLVPGPLRAAGRRMVRGSGSKGPDTSLFVPLSPRVSPGPEGNVGAELSRDLDKGEALKVLNKFYKRKEMQRLGSENGLDARLFHQAFISFRKYVMEAESLSVDLHIILNDICCGAGHVDDLFPYFLRHAKQVFPMLDCMEDLRKISDLRLPANWYPEARAIQRKIIFHAGPTNSGKTHHAIQRFLAANSGVYCGPLKLLAHEIYQKSNDAGVPCDLVTGEERSFVDPDGRQSAHVACTIEMCSVTTPYEIAVIDEIQMIKDPSRGWAWTRALLGLCAEEIHICGEAAAINLVMELMFDTGEEVEVESYERLTPMTVLDTALESLDNLHPGDCIVCFSKSDIYSLSRQIEARGLECAVIYGSLPPGTKLAQAKKFNDPDDPCKIMVATDAIGMGLNLSIKRIIFNSLVKPNINEKGEKEMDRITTSQALQIAGRAGRFRSAFKEGEVTTMNRDDLPVLQEILSKTVEPIEDIFVSLSQVDGLYFVCNIDDFKFLADMIQHIPLNLRVRYVFCTAPINRKHPFVCTSFLKFARQFSRNEPLTFEWLCRHINWPLVPPKNIKDLVHLEAVHDVLDLYLWLSYRFMDMFPDVSLVREIQIELDSIIQIGVKNITRLIRASDSISTTIAAGAEDASVHGGTWTNERINMEDVNSKGQVYIGSRRIRGSKTLGYRAEDYKAEIPGKAGDSLSARLVQQGHLTAELLQQLQEEWAASHGLQTPRNATTQEPSKITSKGLRKKKK
SIO_010081: supv3l1
subclass of: SO_0000673
so part of: supv3l1
location: join(647055..647244,655765..655842,656749..656856,667053..667167,669773..669941,672162..672273,674503..674580,675099..675190,678070..678250,685713..685806,686164..686383,691475..691651,693085..693233,699958..700438)
location: region:647055-700438:1
so has part: feature:647055-647244:1:exon
so has part: feature:655765-655842:1:exon
so has part: feature:656749-656856:1:exon
so has part: feature:667053-667167:1:exon
so has part: feature:669773-669941:1:exon
so has part: feature:672162-672273:1:exon
so has part: feature:674503-674580:1:exon
so has part: feature:675099-675190:1:exon
so has part: feature:678070-678250:1:exon
so has part: feature:685713-685806:1:exon
so has part: feature:686164-686383:1:exon
so has part: feature:691475-691651:1:exon
so has part: feature:693085-693233:1:exon
so has part: feature:699958-700438:1:exon

XP_048464696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:647055-647244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655765-655842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656749-656856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667053-667167:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669773-669941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672162-672273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674503-674580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675099-675190:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678070-678250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685713-685806:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686164-686383:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:691475-691651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:693085-693233:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:699958-700438:1:exon

supv3l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: supv3l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X3
translation: MWLNRSFRLLGLVPGPLRAAGRRMVRGSGSKGPDTSLFVPLSPRVSPGPEGNVGAELSRDLDKGEALKVLNKFYKRKEMQRLGSENGLDGHVDDLFPYFLRHAKQVFPMLDCMEDLRKISDLRLPANWYPEARAIQRKIIFHAGPTNSGKTHHAIQRFLAANSGVYCGPLKLLAHEIYQKSNDAGVPCDLVTGEERSFVDPDGRQSAHVACTIEMCSVTTPYEIAVIDEIQMIKDPSRGWAWTRALLGLCAEEIHICGEAAAINLVMELMFDTGEEVEVESYERLTPMTVLDTALESLDNLHPGDCIVCFSKSDIYSLSRQIEARGLECAVIYGSLPPGTKLAQAKKFNDPDDPCKIMVATDAIGMGLNLSIKRIIFNSLVKPNINEKGEKEMDRITTSQALQIAGRAGRFRSAFKEGEVTTMNRDDLPVLQEILSKTVEPIEAAGLHPTADQIEMFAYQLPDATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQHIPLNLRVRYVFCTAPINRKHPFVCTSFLKFARQFSRNEPLTFEWLCRHINWPLVPPKNIKDLVHLEAVHDVLDLYLWLSYRFMDMFPDVSLVREIQIELDSIIQIGVKNITRLIRASDSISTTIAAGAEDASVHGGTWTNERINMEDVNSKGQVYIGSRRIRGSKTLGYRAEDYKAEIPGKAGDSLSARLVQQGHLTAELLQQLQEEWAASHGLQTPRNATTQEPSKITSKGLRKKKK
SIO_010081: supv3l1
subclass of: SO_0000673
so part of: supv3l1
location: join(647055..647244,655765..655842,667053..667167,669773..669941,672162..672273,674503..674580,675099..675190,678070..678250,685713..685806,686164..686383,691258..691338,691475..691651,693085..693233,699958..700438)
location: region:647055-700438:1
so has part: feature:647055-647244:1:exon
so has part: feature:655765-655842:1:exon
so has part: feature:667053-667167:1:exon
so has part: feature:669773-669941:1:exon
so has part: feature:672162-672273:1:exon
so has part: feature:674503-674580:1:exon
so has part: feature:675099-675190:1:exon
so has part: feature:678070-678250:1:exon
so has part: feature:685713-685806:1:exon
so has part: feature:686164-686383:1:exon
so has part: feature:691258-691338:1:exon
so has part: feature:691475-691651:1:exon
so has part: feature:693085-693233:1:exon
so has part: feature:699958-700438:1:exon

XP_048464697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:647055-647244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655765-655842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667053-667167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669773-669941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672162-672273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:674503-674580:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:675099-675190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678070-678250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:685713-685806:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:686164-686383:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:691258-691338:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:691475-691651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:693085-693233:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:699958-700438:1:exon

LOC109912598
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109912598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 749308..989336
location: region:749308-989336:1
so has part: feature:749308-989336:1:exon
subclass of: SO_0000010

109912598
type: Gene
SIO_000068: ncbigene

position:749308:1
position: 749308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989336:1
position: 989336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749308-989336:1:exon

LOC109912598
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109912598
product: hexokinase-1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608741.1
SIO_010081: LOC109912598
subclass of: SO_0000673
so part of: LOC109912598
location: join(749308..749461,763341..763489,763576..763695,766761..766856,777124..777223,777314..777497,778045..778200,781868..782101,798613..798917,805329..805477,806791..806910,822654..822738,870402..870412,939357..939456,940368..940551,941086..941241,944680..944913,952978..953282,970565..970713,973077..973196,973864..973959,979307..979406,983127..983310,985284..985439,985529..985762,988473..989336)
location: region:749308-989336:1
so has part: feature:749308-749461:1:exon
so has part: feature:763341-763489:1:exon
so has part: feature:763576-763695:1:exon
so has part: feature:766761-766856:1:exon
so has part: feature:777124-777223:1:exon
so has part: feature:777314-777497:1:exon
so has part: feature:778045-778200:1:exon
so has part: feature:781868-782101:1:exon
so has part: feature:798613-798917:1:exon
so has part: feature:805329-805477:1:exon
so has part: feature:806791-806910:1:exon
so has part: feature:822654-822738:1:exon
so has part: feature:870402-870412:1:exon
so has part: feature:939357-939456:1:exon
so has part: feature:940368-940551:1:exon
so has part: feature:941086-941241:1:exon
so has part: feature:944680-944913:1:exon
so has part: feature:952978-953282:1:exon
so has part: feature:970565-970713:1:exon
so has part: feature:973077-973196:1:exon
so has part: feature:973864-973959:1:exon
so has part: feature:979307-979406:1:exon
so has part: feature:983127-983310:1:exon
so has part: feature:985284-985439:1:exon
so has part: feature:985529-985762:1:exon
so has part: feature:988473-989336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749308-749461:1:exon

position:749461:1
position: 749461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763341-763489:1:exon

position:763341:1
position: 763341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763489:1
position: 763489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:763576-763695:1:exon

position:763576:1
position: 763576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763695:1
position: 763695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:766761-766856:1:exon

position:766761:1
position: 766761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766856:1
position: 766856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:777124-777223:1:exon

position:777124:1
position: 777124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777223:1
position: 777223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:777314-777497:1:exon

position:777314:1
position: 777314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777497:1
position: 777497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:778045-778200:1:exon

position:778045:1
position: 778045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778200:1
position: 778200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:781868-782101:1:exon

position:781868:1
position: 781868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782101:1
position: 782101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:798613-798917:1:exon

position:798613:1
position: 798613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798917:1
position: 798917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:805329-805477:1:exon

position:805329:1
position: 805329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805477:1
position: 805477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:806791-806910:1:exon

position:806791:1
position: 806791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806910:1
position: 806910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:822654-822738:1:exon

position:822654:1
position: 822654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822738:1
position: 822738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:870402-870412:1:exon

position:870402:1
position: 870402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870412:1
position: 870412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:939357-939456:1:exon

position:939357:1
position: 939357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939456:1
position: 939456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:940368-940551:1:exon

position:940368:1
position: 940368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940551:1
position: 940551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:941086-941241:1:exon

position:941086:1
position: 941086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941241:1
position: 941241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:944680-944913:1:exon

position:944680:1
position: 944680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944913:1
position: 944913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:952978-953282:1:exon

position:952978:1
position: 952978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953282:1
position: 953282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:970565-970713:1:exon

position:970565:1
position: 970565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970713:1
position: 970713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:973077-973196:1:exon

position:973077:1
position: 973077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973196:1
position: 973196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:973864-973959:1:exon

position:973864:1
position: 973864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973959:1
position: 973959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:979307-979406:1:exon

position:979307:1
position: 979307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979406:1
position: 979406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:983127-983310:1:exon

position:983127:1
position: 983127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983310:1
position: 983310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:985284-985439:1:exon

position:985284:1
position: 985284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985439:1
position: 985439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:985529-985762:1:exon

position:985529:1
position: 985529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985762:1
position: 985762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:988473-989336:1:exon

position:988473:1
position: 988473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109912598
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109912598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hexokinase-1 isoform X1
translation: MQLNKDQIEDIMVRFEVEMLKGLDFPNSSSLKMLPTHVRSTPDGSEKGEFLALDLGGSMFRVLRVKVSEDGRQIVHISSNIYPMTEDMKHENSRQFFDYIAECLADFIEKQQLKDRKLPLGFTFSFPCRQSKLDEGILISWSKGFFVKGVQGVDVVSLLREAISRRGDYEVDVLALVNDTVGTMMTCAFDDPYCEVGVVIGTGTNACYMEELRHIQLVEGDEGRMCINTEWGGFGDDGSLEDIRTVFDREVDDGSINPGKHLFEKMASAMYMGELVRIILVRIVRNGMLFKGKTSSKLLTKGSINIEDIIAIQNYNTGLESAMEMLKNLELEPSEEDGVAVKQICKIVSLRSATLCSATLAVILQHIKKNKKIKRLRTTVGITGTLYRQNMQYAKYFHKMVRSLVPDCDVRFFLAEHGTGKGAAMVTAVAQRLVHQRKYIDKTLAPFRLNRDQLLDIMDKMRSNMERGLKTDTHNGAAVKMLPTYIRKFPTGNENGKFIALDLGGTNLRILLVVIQSGMRKSLRMYSKIFSIPLEIMQGTGEELFDHIVECIADFLEYMGVKGTRLSLGFTFSFPCEQTQLDQGILISWTKGFSATGVEGQDVVSLLKEAIKRNEDYDVDIMAVVNDTVGTMMTCGFDDQRCEVGLIIGTGTNACYMEELRHIDLMEGDEGRMCINIEWGGFGDDGSLESIRTEFDREIDRGSLNPGKQLFEKMISGMYMGELVRLILVKMAKEGLIFEGNITPELLTKGKLETKHVSAIEKSKGGLLKAKEILTRLGLEPSDEDCIAVQHVCTIVSFRSANLCAAALGAILTRLRDNKGVPRLRTTVGMDGSLYKMHPQFARRLQKTVRRLVPDCEVRFLLSESGSGKGAAMVTAVAARLASQRKEIDETLASFTLTQEQLFEVKKRMRTEMELGLKKKSHETATVKMLPTFVRSTPDGTENGDFVALDLGGTNFRVLLVKIRSGKRRTVEMHNKIYAIPLEIMQGTGEELFDHIVHCISDFLDYMGMKGARLPLGFTFSFPCEQKSLDEGILLTWTKGFKATDCEGEDVVTMLRDAIKRRDEFELDVVSIVNDTVGTMMTCAYEDPHCEVGMIVGTGSNTCYMEEARNTELVEGDEGLMCVNMEWGAFGDNGCLDDIRTEYDNAVDDLSLNQGKQTYEKMISGMYLGEIVRNVVIDFTRRGFLFRGQISERLKTRSIFETKFLSQIESDRLALLQVRAILQQLGLDSTCDDSIIVKEVCGAVSKRAAQLCGAGMAAVVDKIRENRDLDHLEITVGVDGTLYKLHPHFSKIMHKTVKELAPKCNVTFLLSEDGSGKGAALITAVACRLRESGQ
SIO_010081: LOC109912598
subclass of: SO_0000673
so part of: LOC109912598
location: join(749326..749461,763341..763489,763576..763695,766761..766856,777124..777223,777314..777497,778045..778200,781868..782101,798613..798917,805329..805477,806791..806910,822654..822738,870402..870412,939357..939456,940368..940551,941086..941241,944680..944913,952978..953282,970565..970713,973077..973196,973864..973959,979307..979406,983127..983310,985284..985439,985529..985762,988473..988614)
location: region:749326-988614:1
so has part: feature:749326-749461:1:exon
so has part: feature:763341-763489:1:exon
so has part: feature:763576-763695:1:exon
so has part: feature:766761-766856:1:exon
so has part: feature:777124-777223:1:exon
so has part: feature:777314-777497:1:exon
so has part: feature:778045-778200:1:exon
so has part: feature:781868-782101:1:exon
so has part: feature:798613-798917:1:exon
so has part: feature:805329-805477:1:exon
so has part: feature:806791-806910:1:exon
so has part: feature:822654-822738:1:exon
so has part: feature:870402-870412:1:exon
so has part: feature:939357-939456:1:exon
so has part: feature:940368-940551:1:exon
so has part: feature:941086-941241:1:exon
so has part: feature:944680-944913:1:exon
so has part: feature:952978-953282:1:exon
so has part: feature:970565-970713:1:exon
so has part: feature:973077-973196:1:exon
so has part: feature:973864-973959:1:exon
so has part: feature:979307-979406:1:exon
so has part: feature:983127-983310:1:exon
so has part: feature:985284-985439:1:exon
so has part: feature:985529-985762:1:exon
so has part: feature:988473-988614:1:exon

XP_048464698.1
type: Protein
SIO_000068: ncbiprotein

position:749326:1
position: 749326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988614:1
position: 988614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749326-749461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763341-763489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763576-763695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:766761-766856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777124-777223:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777314-777497:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778045-778200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:781868-782101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798613-798917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:805329-805477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:806791-806910:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:822654-822738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:870402-870412:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:939357-939456:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:940368-940551:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:941086-941241:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:944680-944913:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:952978-953282:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:970565-970713:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:973077-973196:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:973864-973959:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:979307-979406:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:983127-983310:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:985284-985439:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:985529-985762:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:988473-988614:1:exon

LOC109912598
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109912598
product: hexokinase-1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608742.1
SIO_010081: LOC109912598
subclass of: SO_0000673
so part of: LOC109912598
location: join(868291..868522,892302..892464,917173..917321,925792..925911,935980..936075,939357..939456,940368..940551,941086..941241,944680..944913,952978..953282,970565..970713,973077..973196,973864..973959,979307..979406,983127..983310,985284..985439,985529..985762,988473..989336)
location: region:868291-989336:1
so has part: feature:868291-868522:1:exon
so has part: feature:892302-892464:1:exon
so has part: feature:917173-917321:1:exon
so has part: feature:925792-925911:1:exon
so has part: feature:935980-936075:1:exon
so has part: feature:939357-939456:1:exon
so has part: feature:940368-940551:1:exon
so has part: feature:941086-941241:1:exon
so has part: feature:944680-944913:1:exon
so has part: feature:952978-953282:1:exon
so has part: feature:970565-970713:1:exon
so has part: feature:973077-973196:1:exon
so has part: feature:973864-973959:1:exon
so has part: feature:979307-979406:1:exon
so has part: feature:983127-983310:1:exon
so has part: feature:985284-985439:1:exon
so has part: feature:985529-985762:1:exon
so has part: feature:988473-989336:1:exon

position:868291:1
position: 868291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868291-868522:1:exon

position:868522:1
position: 868522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892302-892464:1:exon

position:892302:1
position: 892302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892464:1
position: 892464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:917173-917321:1:exon

position:917173:1
position: 917173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917321:1
position: 917321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:925792-925911:1:exon

position:925792:1
position: 925792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925911:1
position: 925911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:935980-936075:1:exon

position:935980:1
position: 935980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936075:1
position: 936075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:939357-939456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940368-940551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941086-941241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:944680-944913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952978-953282:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:970565-970713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:973077-973196:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973864-973959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:979307-979406:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:983127-983310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985284-985439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985529-985762:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:988473-989336:1:exon

LOC109912598
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109912598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hexokinase-1 isoform X2
translation: MGGVSSGSHGDGREERAPCAVDVGGGRGLRWDQGLQRRSQALCQFQGDLGTSHRLQKIDKYLYAARLSDETLLDVMARFRTEMEKGLGRDTNPTATLKMLPTFVRSTPDGTEKGDFLALDLGGSNFRILRVKVSCERQQKVEMESQIYPTPEDIMHGSGARLFDHVAECLGDFIEKQEIKDKKLPLGFTFSFPCRQSKLDESVLITWTKGFKASGVEGSDVVKLLRKAIDKRGDYDVDIMAVVNDTVGTMMTCGFDDQRCEVGLIIGTGTNACYMEELRHIDLMEGDEGRMCINIEWGGFGDDGSLESIRTEFDREIDRGSLNPGKQLFEKMISGMYMGELVRLILVKMAKEGLIFEGNITPELLTKGKLETKHVSAIEKSKGGLLKAKEILTRLGLEPSDEDCIAVQHVCTIVSFRSANLCAAALGAILTRLRDNKGVPRLRTTVGMDGSLYKMHPQFARRLQKTVRRLVPDCEVRFLLSESGSGKGAAMVTAVAARLASQRKEIDETLASFTLTQEQLFEVKKRMRTEMELGLKKKSHETATVKMLPTFVRSTPDGTENGDFVALDLGGTNFRVLLVKIRSGKRRTVEMHNKIYAIPLEIMQGTGEELFDHIVHCISDFLDYMGMKGARLPLGFTFSFPCEQKSLDEGILLTWTKGFKATDCEGEDVVTMLRDAIKRRDEFELDVVSIVNDTVGTMMTCAYEDPHCEVGMIVGTGSNTCYMEEARNTELVEGDEGLMCVNMEWGAFGDNGCLDDIRTEYDNAVDDLSLNQGKQTYEKMISGMYLGEIVRNVVIDFTRRGFLFRGQISERLKTRSIFETKFLSQIESDRLALLQVRAILQQLGLDSTCDDSIIVKEVCGAVSKRAAQLCGAGMAAVVDKIRENRDLDHLEITVGVDGTLYKLHPHFSKIMHKTVKELAPKCNVTFLLSEDGSGKGAALITAVACRLRESGQ
SIO_010081: LOC109912598
subclass of: SO_0000673
so part of: LOC109912598
location: join(868352..868522,892302..892464,917173..917321,925792..925911,935980..936075,939357..939456,940368..940551,941086..941241,944680..944913,952978..953282,970565..970713,973077..973196,973864..973959,979307..979406,983127..983310,985284..985439,985529..985762,988473..988614)
location: region:868352-988614:1
so has part: feature:868352-868522:1:exon
so has part: feature:892302-892464:1:exon
so has part: feature:917173-917321:1:exon
so has part: feature:925792-925911:1:exon
so has part: feature:935980-936075:1:exon
so has part: feature:939357-939456:1:exon
so has part: feature:940368-940551:1:exon
so has part: feature:941086-941241:1:exon
so has part: feature:944680-944913:1:exon
so has part: feature:952978-953282:1:exon
so has part: feature:970565-970713:1:exon
so has part: feature:973077-973196:1:exon
so has part: feature:973864-973959:1:exon
so has part: feature:979307-979406:1:exon
so has part: feature:983127-983310:1:exon
so has part: feature:985284-985439:1:exon
so has part: feature:985529-985762:1:exon
so has part: feature:988473-988614:1:exon

XP_048464699.1
type: Protein
SIO_000068: ncbiprotein

position:868352:1
position: 868352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868352-868522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892302-892464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:917173-917321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:925792-925911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:935980-936075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939357-939456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940368-940551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941086-941241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:944680-944913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952978-953282:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:970565-970713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:973077-973196:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973864-973959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:979307-979406:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:983127-983310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985284-985439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985529-985762:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:988473-988614:1:exon

LOC109912598
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109912598
product: hexokinase-1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020512029.2
SIO_010081: LOC109912598
subclass of: SO_0000673
so part of: LOC109912598
location: join(881503..881833,892302..892464,917173..917321,925792..925911,935980..936075,939357..939456,940368..940551,941086..941241,944680..944913,952978..953282,970565..970713,973077..973196,973864..973959,979307..979406,983127..983310,985284..985439,985529..985762,988473..989336)
location: region:881503-989336:1
so has part: feature:881503-881833:1:exon
so has part: feature:892302-892464:1:exon
so has part: feature:917173-917321:1:exon
so has part: feature:925792-925911:1:exon
so has part: feature:935980-936075:1:exon
so has part: feature:939357-939456:1:exon
so has part: feature:940368-940551:1:exon
so has part: feature:941086-941241:1:exon
so has part: feature:944680-944913:1:exon
so has part: feature:952978-953282:1:exon
so has part: feature:970565-970713:1:exon
so has part: feature:973077-973196:1:exon
so has part: feature:973864-973959:1:exon
so has part: feature:979307-979406:1:exon
so has part: feature:983127-983310:1:exon
so has part: feature:985284-985439:1:exon
so has part: feature:985529-985762:1:exon
so has part: feature:988473-989336:1:exon

position:881503:1
position: 881503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881503-881833:1:exon

position:881833:1
position: 881833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892302-892464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:917173-917321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:925792-925911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:935980-936075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939357-939456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940368-940551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941086-941241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:944680-944913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952978-953282:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:970565-970713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:973077-973196:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973864-973959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:979307-979406:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:983127-983310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985284-985439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985529-985762:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:988473-989336:1:exon

LOC109912598
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109912598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hexokinase-1 isoform X3
translation: MIAAQVLAYFFTELKADQVKKIDKYLYAARLSDETLLDVMARFRTEMEKGLGRDTNPTATLKMLPTFVRSTPDGTEKGDFLALDLGGSNFRILRVKVSCERQQKVEMESQIYPTPEDIMHGSGARLFDHVAECLGDFIEKQEIKDKKLPLGFTFSFPCRQSKLDESVLITWTKGFKASGVEGSDVVKLLRKAIDKRGDYDVDIMAVVNDTVGTMMTCGFDDQRCEVGLIIGTGTNACYMEELRHIDLMEGDEGRMCINIEWGGFGDDGSLESIRTEFDREIDRGSLNPGKQLFEKMISGMYMGELVRLILVKMAKEGLIFEGNITPELLTKGKLETKHVSAIEKSKGGLLKAKEILTRLGLEPSDEDCIAVQHVCTIVSFRSANLCAAALGAILTRLRDNKGVPRLRTTVGMDGSLYKMHPQFARRLQKTVRRLVPDCEVRFLLSESGSGKGAAMVTAVAARLASQRKEIDETLASFTLTQEQLFEVKKRMRTEMELGLKKKSHETATVKMLPTFVRSTPDGTENGDFVALDLGGTNFRVLLVKIRSGKRRTVEMHNKIYAIPLEIMQGTGEELFDHIVHCISDFLDYMGMKGARLPLGFTFSFPCEQKSLDEGILLTWTKGFKATDCEGEDVVTMLRDAIKRRDEFELDVVSIVNDTVGTMMTCAYEDPHCEVGMIVGTGSNTCYMEEARNTELVEGDEGLMCVNMEWGAFGDNGCLDDIRTEYDNAVDDLSLNQGKQTYEKMISGMYLGEIVRNVVIDFTRRGFLFRGQISERLKTRSIFETKFLSQIESDRLALLQVRAILQQLGLDSTCDDSIIVKEVCGAVSKRAAQLCGAGMAAVVDKIRENRDLDHLEITVGVDGTLYKLHPHFSKIMHKTVKELAPKCNVTFLLSEDGSGKGAALITAVACRLRESGQ
SIO_010081: LOC109912598
subclass of: SO_0000673
so part of: LOC109912598
location: join(881771..881833,892302..892464,917173..917321,925792..925911,935980..936075,939357..939456,940368..940551,941086..941241,944680..944913,952978..953282,970565..970713,973077..973196,973864..973959,979307..979406,983127..983310,985284..985439,985529..985762,988473..988614)
location: region:881771-988614:1
so has part: feature:881771-881833:1:exon
so has part: feature:892302-892464:1:exon
so has part: feature:917173-917321:1:exon
so has part: feature:925792-925911:1:exon
so has part: feature:935980-936075:1:exon
so has part: feature:939357-939456:1:exon
so has part: feature:940368-940551:1:exon
so has part: feature:941086-941241:1:exon
so has part: feature:944680-944913:1:exon
so has part: feature:952978-953282:1:exon
so has part: feature:970565-970713:1:exon
so has part: feature:973077-973196:1:exon
so has part: feature:973864-973959:1:exon
so has part: feature:979307-979406:1:exon
so has part: feature:983127-983310:1:exon
so has part: feature:985284-985439:1:exon
so has part: feature:985529-985762:1:exon
so has part: feature:988473-988614:1:exon

XP_020367618.1
type: Protein
SIO_000068: ncbiprotein

position:881771:1
position: 881771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881771-881833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892302-892464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:917173-917321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:925792-925911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:935980-936075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939357-939456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940368-940551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941086-941241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:944680-944913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952978-953282:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:970565-970713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:973077-973196:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973864-973959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:979307-979406:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:983127-983310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985284-985439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985529-985762:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:988473-988614:1:exon

tacr2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: tacr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1010543..1100504)
location: region:1010543-1100504:-1
so has part: feature:1010543-1100504:-1:exon
subclass of: SO_0000010

109921385
type: Gene
SIO_000068: ncbigene

position:1010543:-1
position: 1010543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100504:-1
position: 1100504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010543-1100504:-1:exon

tacr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tacr2
product: tachykinin receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048608930.1
SIO_010081: tacr2
subclass of: SO_0000673
so part of: tacr2
location: complement(join(1010543..1011431,1024702..1024898,1055947..1056097,1092721..1092915,1100011..1100504))
location: region:1010543-1100504:-1
so has part: feature:1100011-1100504:-1:exon
so has part: feature:1092721-1092915:-1:exon
so has part: feature:1055947-1056097:-1:exon
so has part: feature:1024702-1024898:-1:exon
so has part: feature:1010543-1011431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1100011-1100504:-1:exon

position:1100011:-1
position: 1100011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1092721-1092915:-1:exon

position:1092721:-1
position: 1092721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092915:-1
position: 1092915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1055947-1056097:-1:exon

position:1055947:-1
position: 1055947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056097:-1
position: 1056097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1024702-1024898:-1:exon

position:1024702:-1
position: 1024702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024898:-1
position: 1024898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1010543-1011431:-1:exon

position:1011431:-1
position: 1011431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tacr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tacr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: substance-K receptor
translation: MNTGAEVDLNETEASANGTFASAFAQPTWQVVLWAVAYSVIILTAVSGNVIVVWIILAHRRMRTVTNYFLLSLAVGDASMAAFNTAFNFIYAVHNEWYFGPHYCRFQNLLPITAVFASIYSMTAIALDRYIAIIHPLKPRLSSSSTKLVIGFIWFLALALAFPQCFYARIVQLESRVICKVDWPGDVGGQHQLTYQLVVIVLTYLLPLMVMGVAYTKVGKTLWASEIPGDSTERYSEHLNAKRKVVKMMIVVVLTFAICWLPYHLYFILASFKKDIYYETYIQQVYLGIFWLAMSSTMYNPIIYCCLNNRFRIGFKRAFRWCPFVHVSRYDQQELTTAVSFRMTRSSTYTGNRIETTLNSRIDSNHDETEEAKAKFISSQTIL
SIO_010081: tacr2
subclass of: SO_0000673
so part of: tacr2
location: complement(join(1011209..1011431,1024702..1024898,1055947..1056097,1092721..1092915,1100011..1100396))
location: region:1011209-1100396:-1
so has part: feature:1100011-1100396:-1:exon
so has part: feature:1092721-1092915:-1:exon
so has part: feature:1055947-1056097:-1:exon
so has part: feature:1024702-1024898:-1:exon
so has part: feature:1011209-1011431:-1:exon

XP_048464887.1
type: Protein
SIO_000068: ncbiprotein

position:1011209:-1
position: 1011209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100396:-1
position: 1100396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100011-1100396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1092721-1092915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055947-1056097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024702-1024898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1011209-1011431:-1:exon

tspan15
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: tspan15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1150829..1272456
location: region:1150829-1272456:1
so has part: feature:1150829-1272456:1:exon
subclass of: SO_0000010

109920987
type: Gene
SIO_000068: ncbigene

position:1150829:1
position: 1150829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272456:1
position: 1272456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150829-1272456:1:exon

tspan15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tspan15
product: tetraspanin 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048609037.1
SIO_010081: tspan15
subclass of: SO_0000673
so part of: tspan15
location: join(1150829..1151053,1199707..1199892,1210148..1210222,1213869..1213964,1220168..1220290,1235853..1235900,1241214..1241330,1271238..1271352,1272229..1272456)
location: region:1150829-1272456:1
so has part: feature:1150829-1151053:1:exon
so has part: feature:1199707-1199892:1:exon
so has part: feature:1210148-1210222:1:exon
so has part: feature:1213869-1213964:1:exon
so has part: feature:1220168-1220290:1:exon
so has part: feature:1235853-1235900:1:exon
so has part: feature:1241214-1241330:1:exon
so has part: feature:1271238-1271352:1:exon
so has part: feature:1272229-1272456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150829-1151053:1:exon

position:1151053:1
position: 1151053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1199707-1199892:1:exon

position:1199707:1
position: 1199707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199892:1
position: 1199892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1210148-1210222:1:exon

position:1210148:1
position: 1210148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1210222:1
position: 1210222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1213869-1213964:1:exon

position:1213869:1
position: 1213869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213964:1
position: 1213964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1220168-1220290:1:exon

position:1220168:1
position: 1220168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220290:1
position: 1220290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1235853-1235900:1:exon

position:1235853:1
position: 1235853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235900:1
position: 1235900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1241214-1241330:1:exon

position:1241214:1
position: 1241214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241330:1
position: 1241330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1271238-1271352:1:exon

position:1271238:1
position: 1271238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271352:1
position: 1271352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1272229-1272456:1:exon

position:1272229:1
position: 1272229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tspan15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tspan15
product: tetraspanin 15, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609036.1
SIO_010081: tspan15
subclass of: SO_0000673
so part of: tspan15
location: join(1150829..1151053,1199707..1199892,1210148..1210222,1213869..1213964,1220168..1220290,1235853..1235900,1241214..1241330,1271238..1272092)
location: region:1150829-1272092:1
so has part: feature:1150829-1151053:1:exon
so has part: feature:1199707-1199892:1:exon
so has part: feature:1210148-1210222:1:exon
so has part: feature:1213869-1213964:1:exon
so has part: feature:1220168-1220290:1:exon
so has part: feature:1235853-1235900:1:exon
so has part: feature:1241214-1241330:1:exon
so has part: feature:1271238-1272092:1:exon

position:1272092:1
position: 1272092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150829-1151053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1199707-1199892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210148-1210222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213869-1213964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220168-1220290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1235853-1235900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241214-1241330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1271238-1272092:1:exon

tspan15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tspan15
product: tetraspanin 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048609038.1
SIO_010081: tspan15
subclass of: SO_0000673
so part of: tspan15
location: join(1150829..1151053,1199707..1199892,1210148..1210222,1213869..1213964,1220168..1220290,1235853..1235900,1241214..1241330,1246426..1246527)
location: region:1150829-1246527:1
so has part: feature:1150829-1151053:1:exon
so has part: feature:1199707-1199892:1:exon
so has part: feature:1210148-1210222:1:exon
so has part: feature:1213869-1213964:1:exon
so has part: feature:1220168-1220290:1:exon
so has part: feature:1235853-1235900:1:exon
so has part: feature:1241214-1241330:1:exon
so has part: feature:1246426-1246527:1:exon

position:1246527:1
position: 1246527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150829-1151053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1199707-1199892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210148-1210222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213869-1213964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220168-1220290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1235853-1235900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241214-1241330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246426-1246527:1:exon

position:1246426:1
position: 1246426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tspan15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tspan15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-15 isoform X2
translation: MERARRGARTGPRNHCQRFNYICLKITLIVYSTFFWLIGTFILCIGIYAEVERQKYKTLQGAFLAPAIILILLGILMFVVSFIGVLASLRDNLCLLKVFLYTLAIVLILELLGGVVALIFRHQTLDFINQNIRKGIIHYYDDLDFKNIMDFVQEEFKCCGAEDFTDWSLNMYHSCEGRAAGPLACGVPYSCCRRNKTDVANTMCGYKTLNEQRFTVVQIIYVGGCTDAVLNWFLGHYAAMAAILFGIIAPQFFGVLITWLYISRLEDIIYEYDAVNIGLMSGPSYSRYGG
SIO_010081: tspan15
subclass of: SO_0000673
so part of: tspan15
location: join(1150946..1151053,1199707..1199892,1210148..1210222,1213869..1213964,1220168..1220290,1235853..1235900,1241214..1241330,1271238..1271352,1272229..1272233)
location: region:1150946-1272233:1
so has part: feature:1150946-1151053:1:exon
so has part: feature:1199707-1199892:1:exon
so has part: feature:1210148-1210222:1:exon
so has part: feature:1213869-1213964:1:exon
so has part: feature:1220168-1220290:1:exon
so has part: feature:1235853-1235900:1:exon
so has part: feature:1241214-1241330:1:exon
so has part: feature:1271238-1271352:1:exon
so has part: feature:1272229-1272233:1:exon

XP_048464994.1
type: Protein
SIO_000068: ncbiprotein

position:1150946:1
position: 1150946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272233:1
position: 1272233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150946-1151053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1199707-1199892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210148-1210222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213869-1213964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220168-1220290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1235853-1235900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241214-1241330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1271238-1271352:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272229-1272233:1:exon

tspan15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tspan15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-15 isoform X1
translation: MERARRGARTGPRNHCQRFNYICLKITLIVYSTFFWLIGTFILCIGIYAEVERQKYKTLQGAFLAPAIILILLGILMFVVSFIGVLASLRDNLCLLKVFLYTLAIVLILELLGGVVALIFRHQTLDFINQNIRKGIIHYYDDLDFKNIMDFVQEEFKCCGAEDFTDWSLNMYHSCEGRAAGPLACGVPYSCCRRNKTDVANTMCGYKTLNEQRFTVVQIIYVGGCTDAVLNWFLGHYAAMAAILFGIIAPQFFGVLITWLYISRLEDIIYEYDAVNIGLMSGPSYSRYGGASTSGAGCCWCLPTLDAVV
SIO_010081: tspan15
subclass of: SO_0000673
so part of: tspan15
location: join(1150946..1151053,1199707..1199892,1210148..1210222,1213869..1213964,1220168..1220290,1235853..1235900,1241214..1241330,1271238..1271414)
location: region:1150946-1271414:1
so has part: feature:1150946-1151053:1:exon
so has part: feature:1199707-1199892:1:exon
so has part: feature:1210148-1210222:1:exon
so has part: feature:1213869-1213964:1:exon
so has part: feature:1220168-1220290:1:exon
so has part: feature:1235853-1235900:1:exon
so has part: feature:1241214-1241330:1:exon
so has part: feature:1271238-1271414:1:exon

XP_048464993.1
type: Protein
SIO_000068: ncbiprotein

position:1271414:1
position: 1271414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150946-1151053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1199707-1199892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210148-1210222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213869-1213964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220168-1220290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1235853-1235900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241214-1241330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1271238-1271414:1:exon

tspan15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tspan15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-15 isoform X3
translation: MERARRGARTGPRNHCQRFNYICLKITLIVYSTFFWLIGTFILCIGIYAEVERQKYKTLQGAFLAPAIILILLGILMFVVSFIGVLASLRDNLCLLKVFLYTLAIVLILELLGGVVALIFRHQTLDFINQNIRKGIIHYYDDLDFKNIMDFVQEEFKCCGAEDFTDWSLNMYHSCEGRAAGPLACGVPYSCCRRNKTDVANTMCGYKTLNEQRFTVVQIIYVGGCTDAVLNWFLGHYAAMAAILFGIIAPQDEGRSSTSLKMMVFVEPPQAL
SIO_010081: tspan15
subclass of: SO_0000673
so part of: tspan15
location: join(1150946..1151053,1199707..1199892,1210148..1210222,1213869..1213964,1220168..1220290,1235853..1235900,1241214..1241330,1246426..1246491)
location: region:1150946-1246491:1
so has part: feature:1150946-1151053:1:exon
so has part: feature:1199707-1199892:1:exon
so has part: feature:1210148-1210222:1:exon
so has part: feature:1213869-1213964:1:exon
so has part: feature:1220168-1220290:1:exon
so has part: feature:1235853-1235900:1:exon
so has part: feature:1241214-1241330:1:exon
so has part: feature:1246426-1246491:1:exon

XP_048464995.1
type: Protein
SIO_000068: ncbiprotein

position:1246491:1
position: 1246491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150946-1151053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1199707-1199892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210148-1210222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213869-1213964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220168-1220290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1235853-1235900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241214-1241330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246426-1246491:1:exon

LOC125480947
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125480947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1355153..>1360006)
location: region:1355153-1360006:-1
so has part: feature:1355153-1360006:-1:exon
subclass of: SO_0000010

125480947
type: Gene
SIO_000068: ncbigene

position:1355153:-1
position: 1355153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360006:-1
position: 1360006
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1355153-1360006:-1:exon

LOC125480947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125480947
product: peroxiredoxin-like 2A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609083.1
SIO_010081: LOC125480947
subclass of: SO_0000673
so part of: LOC125480947
location: complement(join(1355153..1355801,1359313..1359477,1359854..>1360006))
location: region:1355153-1360006:-1
so has part: feature:1359854-1360006:-1:exon
so has part: feature:1359313-1359477:-1:exon
so has part: feature:1355153-1355801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1359854-1360006:-1:exon

position:1359854:-1
position: 1359854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1359313-1359477:-1:exon

position:1359313:-1
position: 1359313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359477:-1
position: 1359477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1355153-1355801:-1:exon

position:1355801:-1
position: 1355801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125480947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125480947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxiredoxin-like 2A
translation: LLLQEAADISSLKPQLDELGVPLYGVVKEDINNELKSFQPFFKGEIFLDEEKRFYGPNKRTMGLLGLFRLGVWRNFLRAWQKGFSGNTDGEGFILGGVFVLGAGDQGVLLEHREKEFGDAVDIRSVLEAARKIRPLRVTEK
SIO_010081: LOC125480947
subclass of: SO_0000673
so part of: LOC125480947
location: complement(join(1355694..1355801,1359313..1359477,1359854..>1360006))
location: region:1355694-1360006:-1
so has part: feature:1359854-1360006:-1:exon
so has part: feature:1359313-1359477:-1:exon
so has part: feature:1355694-1355801:-1:exon

XP_048465040.1
type: Protein
SIO_000068: ncbiprotein

position:1355694:-1
position: 1355694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359854-1360006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359313-1359477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355694-1355801:-1:exon

dydc2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: dydc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1399207..1405211
location: region:1399207-1405211:1
so has part: feature:1399207-1405211:1:exon
subclass of: SO_0000010

109920810
type: Gene
SIO_000068: ncbigene

position:1399207:1
position: 1399207
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1405211:1
position: 1405211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399207-1405211:1:exon

dydc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dydc2
product: DPY30 domain containing 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609148.1
SIO_010081: dydc2
subclass of: SO_0000673
so part of: dydc2
location: join(<1399207..1399323,1401599..1401712,1405027..1405211)
location: region:1399207-1405211:1
so has part: feature:1399207-1399323:1:exon
so has part: feature:1401599-1401712:1:exon
so has part: feature:1405027-1405211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1399207-1399323:1:exon

position:1399323:1
position: 1399323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1401599-1401712:1:exon

position:1401599:1
position: 1401599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401712:1
position: 1401712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1405027-1405211:1:exon

position:1405027:1
position: 1405027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dydc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dydc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein dydc2
translation: LQKLDVANLELEKQQLQILAALDTLKEKQERVLQELDKQTSEHAIMASASSLVPPEWFGEPELETVEEKDELNVAVEVQNEDTLPTEEESKHAEEPIEEAEEKS
SIO_010081: dydc2
subclass of: SO_0000673
so part of: dydc2
location: join(<1399207..1399323,1401599..1401712,1405027..1405110)
location: region:1399207-1405110:1
so has part: feature:1399207-1399323:1:exon
so has part: feature:1401599-1401712:1:exon
so has part: feature:1405027-1405110:1:exon

XP_048465105.1
type: Protein
SIO_000068: ncbiprotein

position:1405110:1
position: 1405110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399207-1399323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1401599-1401712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1405027-1405110:1:exon

LOC109920808
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109920808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1415146..1447909
location: region:1415146-1447909:1
so has part: feature:1415146-1447909:1:exon
subclass of: SO_0000010

109920808
type: Gene
SIO_000068: ncbigene

position:1415146:1
position: 1415146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447909:1
position: 1447909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415146-1447909:1:exon

LOC109920808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109920808
product: inorganic pyrophosphatase-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020520875.2
SIO_010081: LOC109920808
subclass of: SO_0000673
so part of: LOC109920808
location: join(1415146..1415290,1415915..1415979,1424077..1424130,1424957..1425076,1427972..1428058,1429310..1429436,1433006..1433133,1434397..1434482,1437838..1437907,1439912..1439951,1447713..1447909)
location: region:1415146-1447909:1
so has part: feature:1415146-1415290:1:exon
so has part: feature:1415915-1415979:1:exon
so has part: feature:1424077-1424130:1:exon
so has part: feature:1424957-1425076:1:exon
so has part: feature:1427972-1428058:1:exon
so has part: feature:1429310-1429436:1:exon
so has part: feature:1433006-1433133:1:exon
so has part: feature:1434397-1434482:1:exon
so has part: feature:1437838-1437907:1:exon
so has part: feature:1439912-1439951:1:exon
so has part: feature:1447713-1447909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1415146-1415290:1:exon

position:1415290:1
position: 1415290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1415915-1415979:1:exon

position:1415915:1
position: 1415915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415979:1
position: 1415979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1424077-1424130:1:exon

position:1424077:1
position: 1424077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424130:1
position: 1424130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1424957-1425076:1:exon

position:1424957:1
position: 1424957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425076:1
position: 1425076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1427972-1428058:1:exon

position:1427972:1
position: 1427972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428058:1
position: 1428058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1429310-1429436:1:exon

position:1429310:1
position: 1429310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429436:1
position: 1429436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1433006-1433133:1:exon

position:1433006:1
position: 1433006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433133:1
position: 1433133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1434397-1434482:1:exon

position:1434397:1
position: 1434397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434482:1
position: 1434482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1437838-1437907:1:exon

position:1437838:1
position: 1437838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437907:1
position: 1437907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1439912-1439951:1:exon

position:1439912:1
position: 1439912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439951:1
position: 1439951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1447713-1447909:1:exon

position:1447713:1
position: 1447713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109920808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109920808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inorganic pyrophosphatase-like
translation: MAGYCRQERGREHSGTYRLFLSNAQGQFLSPFHDIPLYAAKTEDVFNMIVEVPRWTNAKMEIATKEPLNPIKQDVKKGNMRFVANVFPHKGYIWNYGALPQTWEDPSHTDESTKCRGDNDPIDVCEIGTKVCARGEVIKVKVLGTLALIDEGETDWKIIAINVEDPEANSFKNIDDVRRLKPGYLEATVDWFRRYKVPDGKPENQFAFNGEFKDKDFATQVIKSTHEFWKTLVMNKPSVGGIDCTNTTVPDSPFRCSETDAKAFVDAVPAYGAGDSEPVDVDKWWYGKKN
SIO_010081: LOC109920808
subclass of: SO_0000673
so part of: LOC109920808
location: join(1415227..1415290,1415915..1415979,1424077..1424130,1424957..1425076,1427972..1428058,1429310..1429436,1433006..1433133,1434397..1434482,1437838..1437907,1439912..1439951,1447713..1447744)
location: region:1415227-1447744:1
so has part: feature:1415227-1415290:1:exon
so has part: feature:1415915-1415979:1:exon
so has part: feature:1424077-1424130:1:exon
so has part: feature:1424957-1425076:1:exon
so has part: feature:1427972-1428058:1:exon
so has part: feature:1429310-1429436:1:exon
so has part: feature:1433006-1433133:1:exon
so has part: feature:1434397-1434482:1:exon
so has part: feature:1437838-1437907:1:exon
so has part: feature:1439912-1439951:1:exon
so has part: feature:1447713-1447744:1:exon

XP_020376464.2
type: Protein
SIO_000068: ncbiprotein

position:1415227:1
position: 1415227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447744:1
position: 1447744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415227-1415290:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1415915-1415979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1424077-1424130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1424957-1425076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427972-1428058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1429310-1429436:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433006-1433133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1434397-1434482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1437838-1437907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1439912-1439951:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1447713-1447744:1:exon

slc25a16
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: slc25a16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1455721..1511262)
location: region:1455721-1511262:-1
so has part: feature:1455721-1511262:-1:exon
subclass of: SO_0000010

109920809
type: Gene
SIO_000068: ncbigene

position:1455721:-1
position: 1455721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511262:-1
position: 1511262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455721-1511262:-1:exon

slc25a16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: slc25a16
product: solute carrier family 25 member 16, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609094.1
SIO_010081: slc25a16
subclass of: SO_0000673
so part of: slc25a16
location: complement(join(1455721..1456429,1457359..1457427,1460027..1460189,1460726..1460792,1464964..1465085,1479731..1479794,1491024..1491157,1497476..1497568,1505435..1505572,1511198..1511262))
location: region:1455721-1511262:-1
so has part: feature:1511198-1511262:-1:exon
so has part: feature:1505435-1505572:-1:exon
so has part: feature:1497476-1497568:-1:exon
so has part: feature:1491024-1491157:-1:exon
so has part: feature:1479731-1479794:-1:exon
so has part: feature:1464964-1465085:-1:exon
so has part: feature:1460726-1460792:-1:exon
so has part: feature:1460027-1460189:-1:exon
so has part: feature:1457359-1457427:-1:exon
so has part: feature:1455721-1456429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1511198-1511262:-1:exon

position:1511198:-1
position: 1511198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1505435-1505572:-1:exon

position:1505435:-1
position: 1505435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505572:-1
position: 1505572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1497476-1497568:-1:exon

position:1497476:-1
position: 1497476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497568:-1
position: 1497568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1491024-1491157:-1:exon

position:1491024:-1
position: 1491024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491157:-1
position: 1491157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1479731-1479794:-1:exon

position:1479731:-1
position: 1479731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479794:-1
position: 1479794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1464964-1465085:-1:exon

position:1464964:-1
position: 1464964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465085:-1
position: 1465085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1460726-1460792:-1:exon

position:1460726:-1
position: 1460726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460792:-1
position: 1460792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1460027-1460189:-1:exon

position:1460027:-1
position: 1460027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460189:-1
position: 1460189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1457359-1457427:-1:exon

position:1457359:-1
position: 1457359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457427:-1
position: 1457427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1455721-1456429:-1:exon

position:1456429:-1
position: 1456429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc25a16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: slc25a16
product: solute carrier family 25 member 16, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609095.1
SIO_010081: slc25a16
subclass of: SO_0000673
so part of: slc25a16
location: complement(join(1455721..1456429,1457359..1457427,1460027..1460189,1460726..1460792,1464964..1465085,1479731..1479794,1491024..1491157,1497476..1497568,1505435..1505572,1505867..1506062))
location: region:1455721-1506062:-1
so has part: feature:1505867-1506062:-1:exon
so has part: feature:1505435-1505572:-1:exon
so has part: feature:1497476-1497568:-1:exon
so has part: feature:1491024-1491157:-1:exon
so has part: feature:1479731-1479794:-1:exon
so has part: feature:1464964-1465085:-1:exon
so has part: feature:1460726-1460792:-1:exon
so has part: feature:1460027-1460189:-1:exon
so has part: feature:1457359-1457427:-1:exon
so has part: feature:1455721-1456429:-1:exon

position:1506062:-1
position: 1506062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1505867-1506062:-1:exon

position:1505867:-1
position: 1505867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1505435-1505572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1497476-1497568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1491024-1491157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479731-1479794:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1464964-1465085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1460726-1460792:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1460027-1460189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1457359-1457427:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1455721-1456429:-1:exon

slc25a16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: slc25a16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: graves disease carrier protein
translation: MTTEAPIPASAKTGVGAPTRRDFFWLRSLVAGGIAGCCAKSTIAPLDRVKILLQAHNRHYKHLGVFSTLRAVPKKEGFLGLYKGNGAMMVRIFPYGAIQFTAFDRYRKLLIAKLGISGHVHRLMAGSMAGMTAVICTYPLDMIRARLAFQVKGEHRYAGIIDAFRVIYTQEGGFQGFYRGLTPTIIGMAPYAGISFFTFGTLKSIGLSQAPGILGRPSSDNPNVLVLKTHVNLLCGGIAGAFAQTVSYPLDVARRRMQLGSILTEADKCVSMCKTLKYVYKVHGIQKGLYRGLTLNYIRCIPSQAVAFTTYELMRQVLHLN
SIO_010081: slc25a16
subclass of: SO_0000673
so part of: slc25a16
location: complement(join(1456273..1456429,1457359..1457427,1460027..1460189,1460726..1460792,1464964..1465085,1479731..1479794,1491024..1491157,1497476..1497568,1505435..1505531))
location: region:1456273-1505531:-1
so has part: feature:1505435-1505531:-1:exon
so has part: feature:1497476-1497568:-1:exon
so has part: feature:1491024-1491157:-1:exon
so has part: feature:1479731-1479794:-1:exon
so has part: feature:1464964-1465085:-1:exon
so has part: feature:1460726-1460792:-1:exon
so has part: feature:1460027-1460189:-1:exon
so has part: feature:1457359-1457427:-1:exon
so has part: feature:1456273-1456429:-1:exon

XP_048465051.1
type: Protein
SIO_000068: ncbiprotein

position:1456273:-1
position: 1456273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505531:-1
position: 1505531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1505435-1505531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1497476-1497568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1491024-1491157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479731-1479794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1464964-1465085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1460726-1460792:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1460027-1460189:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1457359-1457427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1456273-1456429:-1:exon

slc25a16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: slc25a16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: graves disease carrier protein
translation: MTTEAPIPASAKTGVGAPTRRDFFWLRSLVAGGIAGCCAKSTIAPLDRVKILLQAHNRHYKHLGVFSTLRAVPKKEGFLGLYKGNGAMMVRIFPYGAIQFTAFDRYRKLLIAKLGISGHVHRLMAGSMAGMTAVICTYPLDMIRARLAFQVKGEHRYAGIIDAFRVIYTQEGGFQGFYRGLTPTIIGMAPYAGISFFTFGTLKSIGLSQAPGILGRPSSDNPNVLVLKTHVNLLCGGIAGAFAQTVSYPLDVARRRMQLGSILTEADKCVSMCKTLKYVYKVHGIQKGLYRGLTLNYIRCIPSQAVAFTTYELMRQVLHLN
SIO_010081: slc25a16
subclass of: SO_0000673
so part of: slc25a16
location: complement(join(1456273..1456429,1457359..1457427,1460027..1460189,1460726..1460792,1464964..1465085,1479731..1479794,1491024..1491157,1497476..1497568,1505435..1505531))
location: region:1456273-1505531:-1
so has part: feature:1505435-1505531:-1:exon
so has part: feature:1497476-1497568:-1:exon
so has part: feature:1491024-1491157:-1:exon
so has part: feature:1479731-1479794:-1:exon
so has part: feature:1464964-1465085:-1:exon
so has part: feature:1460726-1460792:-1:exon
so has part: feature:1460027-1460189:-1:exon
so has part: feature:1457359-1457427:-1:exon
so has part: feature:1456273-1456429:-1:exon

XP_048465052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1505435-1505531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1497476-1497568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1491024-1491157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479731-1479794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1464964-1465085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1460726-1460792:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1460027-1460189:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1457359-1457427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1456273-1456429:-1:exon

eif4e1c
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: eif4e1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1526132..1549446
location: region:1526132-1549446:1
so has part: feature:1526132-1549446:1:exon
subclass of: SO_0000010

109924373
type: Gene
SIO_000068: ncbigene

position:1526132:1
position: 1526132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1549446:1
position: 1549446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526132-1549446:1:exon

eif4e1c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: eif4e1c
product: eukaryotic translation initiation factor 4E family member 1c
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608926.1
SIO_010081: eif4e1c
subclass of: SO_0000673
so part of: eif4e1c
location: join(1526132..1526218,1535069..1535172,1538649..1538744,1541499..1541562,1542745..1542858,1545148..1545287,1547850..1549446)
location: region:1526132-1549446:1
so has part: feature:1526132-1526218:1:exon
so has part: feature:1535069-1535172:1:exon
so has part: feature:1538649-1538744:1:exon
so has part: feature:1541499-1541562:1:exon
so has part: feature:1542745-1542858:1:exon
so has part: feature:1545148-1545287:1:exon
so has part: feature:1547850-1549446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1526132-1526218:1:exon

position:1526218:1
position: 1526218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1535069-1535172:1:exon

position:1535069:1
position: 1535069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1535172:1
position: 1535172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1538649-1538744:1:exon

position:1538649:1
position: 1538649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1538744:1
position: 1538744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1541499-1541562:1:exon

position:1541499:1
position: 1541499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541562:1
position: 1541562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1542745-1542858:1:exon

position:1542745:1
position: 1542745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1542858:1
position: 1542858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1545148-1545287:1:exon

position:1545148:1
position: 1545148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545287:1
position: 1545287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1547850-1549446:1:exon

position:1547850:1
position: 1547850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

eif4e1c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: eif4e1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4E family member 1c
translation: MATAEPATTAEPQEVPEVLEADSAAAPEVCPETVSQDQYLKHPLQNRWALWYFKNDKTKSWTENLRLIAKFDTVEDFWALYNHIQQPSKLLFGCDYCLFKDGIKPMWEDEKNKRGGRWLMTLNKQQRHNDLDRYWLETLLCLIGEAFDEFSDEVCGAVVNVRPKGDKIAIWTGNCQNRDAVVSIGQLYKERLGLSLKVLIGYQSHDDTSSKSGSTTKNLFSV
SIO_010081: eif4e1c
subclass of: SO_0000673
so part of: eif4e1c
location: join(1526183..1526218,1535069..1535172,1538649..1538744,1541499..1541562,1542745..1542858,1545148..1545287,1547850..1547964)
location: region:1526183-1547964:1
so has part: feature:1526183-1526218:1:exon
so has part: feature:1535069-1535172:1:exon
so has part: feature:1538649-1538744:1:exon
so has part: feature:1541499-1541562:1:exon
so has part: feature:1542745-1542858:1:exon
so has part: feature:1545148-1545287:1:exon
so has part: feature:1547850-1547964:1:exon

XP_048464883.1
type: Protein
SIO_000068: ncbiprotein

position:1526183:1
position: 1526183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547964:1
position: 1547964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526183-1526218:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1535069-1535172:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538649-1538744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541499-1541562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1542745-1542858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1545148-1545287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1547850-1547964:1:exon

LOC109924371
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1548010..1551265
location: region:1548010-1551265:1
so has part: feature:1548010-1551265:1:exon

109924371
type: Gene
SIO_000068: ncbigene

position:1548010:1
position: 1548010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1551265:1
position: 1551265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548010-1551265:1:exon

LOC109924371
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC109924371
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC109924371
subclass of: SO_0000673
so part of: LOC109924371
location: 1548010..1548013
location: region:1548010-1548013:1
so has part: feature:1548010-1548013:1:exon

position:1548013:1
position: 1548013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548010-1548013:1:exon

LOC109924371
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC109924371
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC109924371
subclass of: SO_0000673
so part of: LOC109924371
location: 1550674..1551265
location: region:1550674-1551265:1
so has part: feature:1550674-1551265:1:exon

position:1550674:1
position: 1550674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1550674-1551265:1:exon

dna2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: dna2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1557950..1660173
location: region:1557950-1660173:1
so has part: feature:1557950-1660173:1:exon
subclass of: SO_0000010

109916497
type: Gene
SIO_000068: ncbigene

position:1557950:1
position: 1557950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660173:1
position: 1660173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1557950-1660173:1:exon

dna2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dna2
product: DNA replication helicase/nuclease 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609149.1
SIO_010081: dna2
subclass of: SO_0000673
so part of: dna2
location: join(1557950..1558057,1580396..1580451,1580711..1580884,1581310..1581493,1583690..1583838,1585752..1585883,1587468..1587693,1594868..1594985,1604539..1604704,1618398..1618592,1619778..1620008,1627169..1627285,1630593..1630702,1631077..1631186,1631469..1631693,1645286..1645479,1650071..1650160,1650239..1650425,1651318..1651407,1654652..1654837,1657686..1657832,1659180..1660173)
location: region:1557950-1660173:1
so has part: feature:1557950-1558057:1:exon
so has part: feature:1580396-1580451:1:exon
so has part: feature:1580711-1580884:1:exon
so has part: feature:1581310-1581493:1:exon
so has part: feature:1583690-1583838:1:exon
so has part: feature:1585752-1585883:1:exon
so has part: feature:1587468-1587693:1:exon
so has part: feature:1594868-1594985:1:exon
so has part: feature:1604539-1604704:1:exon
so has part: feature:1618398-1618592:1:exon
so has part: feature:1619778-1620008:1:exon
so has part: feature:1627169-1627285:1:exon
so has part: feature:1630593-1630702:1:exon
so has part: feature:1631077-1631186:1:exon
so has part: feature:1631469-1631693:1:exon
so has part: feature:1645286-1645479:1:exon
so has part: feature:1650071-1650160:1:exon
so has part: feature:1650239-1650425:1:exon
so has part: feature:1651318-1651407:1:exon
so has part: feature:1654652-1654837:1:exon
so has part: feature:1657686-1657832:1:exon
so has part: feature:1659180-1660173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1557950-1558057:1:exon

position:1558057:1
position: 1558057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1580396-1580451:1:exon

position:1580396:1
position: 1580396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580451:1
position: 1580451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1580711-1580884:1:exon

position:1580711:1
position: 1580711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580884:1
position: 1580884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1581310-1581493:1:exon

position:1581310:1
position: 1581310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581493:1
position: 1581493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1583690-1583838:1:exon

position:1583690:1
position: 1583690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583838:1
position: 1583838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1585752-1585883:1:exon

position:1585752:1
position: 1585752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585883:1
position: 1585883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1587468-1587693:1:exon

position:1587468:1
position: 1587468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587693:1
position: 1587693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1594868-1594985:1:exon

position:1594868:1
position: 1594868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594985:1
position: 1594985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1604539-1604704:1:exon

position:1604539:1
position: 1604539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604704:1
position: 1604704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1618398-1618592:1:exon

position:1618398:1
position: 1618398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618592:1
position: 1618592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1619778-1620008:1:exon

position:1619778:1
position: 1619778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620008:1
position: 1620008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1627169-1627285:1:exon

position:1627169:1
position: 1627169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627285:1
position: 1627285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1630593-1630702:1:exon

position:1630593:1
position: 1630593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630702:1
position: 1630702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1631077-1631186:1:exon

position:1631077:1
position: 1631077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1631186:1
position: 1631186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1631469-1631693:1:exon

position:1631469:1
position: 1631469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1631693:1
position: 1631693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1645286-1645479:1:exon

position:1645286:1
position: 1645286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645479:1
position: 1645479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1650071-1650160:1:exon

position:1650071:1
position: 1650071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650160:1
position: 1650160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1650239-1650425:1:exon

position:1650239:1
position: 1650239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650425:1
position: 1650425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1651318-1651407:1:exon

position:1651318:1
position: 1651318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651407:1
position: 1651407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1654652-1654837:1:exon

position:1654652:1
position: 1654652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654837:1
position: 1654837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1657686-1657832:1:exon

position:1657686:1
position: 1657686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657832:1
position: 1657832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1659180-1660173:1:exon

position:1659180:1
position: 1659180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dna2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dna2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication ATP-dependent helicase/nuclease DNA2
translation: MTGGIGARQHLVGVVWQRAGRLSVAAMSRSGERVWGALIFGVLLRLEYVVITWTGEKCLNAAASVCKGRYQVVLVNEVLSPSADREKHLTITASQTGTDGCSNTQQCVLKDDWDTVEVKVGDTVYVEGEKSSDTFVVSREKGYLIVSPDHLISGTSVANSIRCMRKAVLNERFKACEKGTQQMLVGTLVHEIFQKAAMSNRFTQNALEEVASQTVYSQKYLGEMYSLNLSQADMMQAVRDYLPSLVTWAQDFMDNSAQSGIQQLQLKLPSDRNSSRLASICGITVLDIEDIEENIWSPRFGLKGKIDVTASVKIHRQSRTQTKVMPLELKTGKESNSVEHRSQVILYTLLSQERREDPEAGFLLYLKTGAMHPVPGNHMDKRELLKLRNQLVFYLTNGIIWPASKNTDTKAAALPPIISDQQTCRFCSQRRNCALYSRAVEQELENCSVPADVKPILQEETKHLELVHLQYFQLWYLLCVLEAQAVDKKGGLKNIWLHSAEEREQQGCCVANLVRSGCIQTIADGQYEHKFTRRTGSILKTALMVGDRVVVSGQEKMLLAVSSGYVTDICSLQITCTLDRNLSRLPLETIFRLDHEEGVGNVNIHLGNLSKLMEQSVVSDKLRKLIIDLRPPQFIPFLSTVLPGEAKETVANILRGLNKPQKQAMKRVLLSKDYTLIMGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNILLKLARFKVGFLRLGRFQKVHPDIRKFTDEDICRRKSIQTLTELERLYKSELVVATTCMGMKHPIFSQRRFDFCIVDEASQINQLICLGPLFAADRFVLVGDHQQLPPIVQSSDARSLGMDESLFKHLEQNLDAVVQLNVQYRMNSTIMSLSNKLIYEGKLVCGSEQIATATLQLPKWNELHVLGLKDTWLQDALEPYKPVCFLDTEKVPAPERDEQYGLSNLTEAELVYCLTAVLVKVGCKPCNIGIIAPYRQQLKAICAVLMRDKAFSAVEVNTVDKYQGRDKSVIIVSFVKSNSEGKLGELLKDWRRLNVALTRPKHKLIMVGCMSTLCQFAPFKKLFDHLKAEQMIIDLPAAAHTIVVAKHVHLSS
SIO_010081: dna2
subclass of: SO_0000673
so part of: dna2
location: join(1557950..1558057,1580396..1580451,1580711..1580884,1581310..1581493,1583690..1583838,1585752..1585883,1587468..1587693,1594868..1594985,1604539..1604704,1618398..1618592,1619778..1620008,1627169..1627285,1630593..1630702,1631077..1631186,1631469..1631693,1645286..1645479,1650071..1650160,1650239..1650425,1651318..1651407,1654652..1654837,1657686..1657832,1659180..1659245)
location: region:1557950-1659245:1
so has part: feature:1557950-1558057:1:exon
so has part: feature:1580396-1580451:1:exon
so has part: feature:1580711-1580884:1:exon
so has part: feature:1581310-1581493:1:exon
so has part: feature:1583690-1583838:1:exon
so has part: feature:1585752-1585883:1:exon
so has part: feature:1587468-1587693:1:exon
so has part: feature:1594868-1594985:1:exon
so has part: feature:1604539-1604704:1:exon
so has part: feature:1618398-1618592:1:exon
so has part: feature:1619778-1620008:1:exon
so has part: feature:1627169-1627285:1:exon
so has part: feature:1630593-1630702:1:exon
so has part: feature:1631077-1631186:1:exon
so has part: feature:1631469-1631693:1:exon
so has part: feature:1645286-1645479:1:exon
so has part: feature:1650071-1650160:1:exon
so has part: feature:1650239-1650425:1:exon
so has part: feature:1651318-1651407:1:exon
so has part: feature:1654652-1654837:1:exon
so has part: feature:1657686-1657832:1:exon
so has part: feature:1659180-1659245:1:exon

XP_048465106.1
type: Protein
SIO_000068: ncbiprotein

position:1659245:1
position: 1659245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1557950-1558057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1580396-1580451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1580711-1580884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1581310-1581493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1583690-1583838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1585752-1585883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1587468-1587693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594868-1594985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1604539-1604704:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1618398-1618592:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1619778-1620008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1627169-1627285:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1630593-1630702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1631077-1631186:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1631469-1631693:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1645286-1645479:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1650071-1650160:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1650239-1650425:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1651318-1651407:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1654652-1654837:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1657686-1657832:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1659180-1659245:1:exon

hnrnph3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: hnrnph3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1677141..1694331
location: region:1677141-1694331:1
so has part: feature:1677141-1694331:1:exon
subclass of: SO_0000010

109916494
type: Gene
SIO_000068: ncbigene

position:1677141:1
position: 1677141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694331:1
position: 1694331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677141-1694331:1:exon

hnrnph3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hnrnph3
product: heterogeneous nuclear ribonucleoprotein H3 (2H9), transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020516214.2
SIO_010081: hnrnph3
subclass of: SO_0000673
so part of: hnrnph3
location: join(1677141..1677353,1678191..1678223,1678307..1678408,1678501..1678656,1684680..1684823,1685501..1685639,1686730..1686917,1688154..1688246,1689790..1689905,1690039..1690174,1691310..1691393,1691477..1691563,1693563..1694331)
location: region:1677141-1694331:1
so has part: feature:1677141-1677353:1:exon
so has part: feature:1678191-1678223:1:exon
so has part: feature:1678307-1678408:1:exon
so has part: feature:1678501-1678656:1:exon
so has part: feature:1684680-1684823:1:exon
so has part: feature:1685501-1685639:1:exon
so has part: feature:1686730-1686917:1:exon
so has part: feature:1688154-1688246:1:exon
so has part: feature:1689790-1689905:1:exon
so has part: feature:1690039-1690174:1:exon
so has part: feature:1691310-1691393:1:exon
so has part: feature:1691477-1691563:1:exon
so has part: feature:1693563-1694331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1677141-1677353:1:exon

position:1677353:1
position: 1677353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1678191-1678223:1:exon

position:1678191:1
position: 1678191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678223:1
position: 1678223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1678307-1678408:1:exon

position:1678307:1
position: 1678307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678408:1
position: 1678408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1678501-1678656:1:exon

position:1678501:1
position: 1678501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678656:1
position: 1678656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1684680-1684823:1:exon

position:1684680:1
position: 1684680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684823:1
position: 1684823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1685501-1685639:1:exon

position:1685501:1
position: 1685501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685639:1
position: 1685639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1686730-1686917:1:exon

position:1686730:1
position: 1686730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686917:1
position: 1686917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1688154-1688246:1:exon

position:1688154:1
position: 1688154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688246:1
position: 1688246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1689790-1689905:1:exon

position:1689790:1
position: 1689790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689905:1
position: 1689905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1690039-1690174:1:exon

position:1690039:1
position: 1690039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690174:1
position: 1690174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1691310-1691393:1:exon

position:1691310:1
position: 1691310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691393:1
position: 1691393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1691477-1691563:1:exon

position:1691477:1
position: 1691477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691563:1
position: 1691563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1693563-1694331:1:exon

position:1693563:1
position: 1693563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hnrnph3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hnrnph3
product: heterogeneous nuclear ribonucleoprotein H3 (2H9), transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020516215.2
SIO_010081: hnrnph3
subclass of: SO_0000673
so part of: hnrnph3
location: join(1677141..1677353,1678191..1678223,1678307..1678408,1678501..1678656,1684680..1684823,1685501..1685639,1686730..1686917,1688154..1688246,1689790..1689905,1690039..1690174,1691310..1691393,1691477..1691563,1694121..1694331)
location: region:1677141-1694331:1
so has part: feature:1677141-1677353:1:exon
so has part: feature:1678191-1678223:1:exon
so has part: feature:1678307-1678408:1:exon
so has part: feature:1678501-1678656:1:exon
so has part: feature:1684680-1684823:1:exon
so has part: feature:1685501-1685639:1:exon
so has part: feature:1686730-1686917:1:exon
so has part: feature:1688154-1688246:1:exon
so has part: feature:1689790-1689905:1:exon
so has part: feature:1690039-1690174:1:exon
so has part: feature:1691310-1691393:1:exon
so has part: feature:1691477-1691563:1:exon
so has part: feature:1694121-1694331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1677141-1677353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678191-1678223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678307-1678408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1678501-1678656:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684680-1684823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685501-1685639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1686730-1686917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1688154-1688246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1689790-1689905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690039-1690174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1691310-1691393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1691477-1691563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1694121-1694331:1:exon

position:1694121:1
position: 1694121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hnrnph3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hnrnph3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein H3 isoform X2
translation: MAQEDGNQHRDVFSAGDECGSGPCSPGFSSEIFTNLEPAVEEKEPEIPAKEEDYVVRVRGLPWSCTPEEVARFFSECDIRNGVNGVQFTTSKEGRPSGEAYVHLRNAEDFKKALAKDRKYMGHRYIEVFKSNGSEMDWVLKHSGTSHPDTSNDGTVRLRGLPFGCSKEEIVQFFTGLEIVPNGITLPMDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRGEVRAYYDPPKRLMGQRPGPYDRPMGRGGYFGAGPQRGGVYDRMRRGAGGYGGGYGGYDDYNGYDNYGYGNDEYDCPGAMRGSRGMSNHGYGGAGDASSGYMSGHFVHMRGLPFRAREDDVAHFFSPLNPLRIHLEYGSDGRATGEADVEFATHEDAVAAMSKDKAHMQHRYIELFLNSTAGGGSGYGSNYGGHAMGNQGGYGSSGNHGMSGYAGYGGQSNMGSYDRSWTMNI
SIO_010081: hnrnph3
subclass of: SO_0000673
so part of: hnrnph3
location: join(1677263..1677353,1678191..1678223,1678307..1678408,1678501..1678656,1684680..1684823,1685501..1685639,1686730..1686917,1688154..1688246,1689790..1689905,1690039..1690174,1691310..1691393,1691477..1691563,1694121..1694146)
location: region:1677263-1694146:1
so has part: feature:1677263-1677353:1:exon
so has part: feature:1678191-1678223:1:exon
so has part: feature:1678307-1678408:1:exon
so has part: feature:1678501-1678656:1:exon
so has part: feature:1684680-1684823:1:exon
so has part: feature:1685501-1685639:1:exon
so has part: feature:1686730-1686917:1:exon
so has part: feature:1688154-1688246:1:exon
so has part: feature:1689790-1689905:1:exon
so has part: feature:1690039-1690174:1:exon
so has part: feature:1691310-1691393:1:exon
so has part: feature:1691477-1691563:1:exon
so has part: feature:1694121-1694146:1:exon

XP_020371804.1
type: Protein
SIO_000068: ncbiprotein

position:1677263:1
position: 1677263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694146:1
position: 1694146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677263-1677353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678191-1678223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678307-1678408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1678501-1678656:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684680-1684823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685501-1685639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1686730-1686917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1688154-1688246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1689790-1689905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690039-1690174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1691310-1691393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1691477-1691563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1694121-1694146:1:exon

hnrnph3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hnrnph3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein H3 isoform X1
translation: MAQEDGNQHRDVFSAGDECGSGPCSPGFSSEIFTNLEPAVEEKEPEIPAKEEDYVVRVRGLPWSCTPEEVARFFSECDIRNGVNGVQFTTSKEGRPSGEAYVHLRNAEDFKKALAKDRKYMGHRYIEVFKSNGSEMDWVLKHSGTSHPDTSNDGTVRLRGLPFGCSKEEIVQFFTGLEIVPNGITLPMDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRGEVRAYYDPPKRLMGQRPGPYDRPMGRGGYFGAGPQRGGVYDRMRRGAGGYGGGYGGYDDYNGYDNYGYGNDEYDCPGAMRGSRGMSNHGYGGAGDASSGYMSGHFVHMRGLPFRAREDDVAHFFSPLNPLRIHLEYGSDGRATGEADVEFATHEDAVAAMSKDKAHMQHRYIELFLNSTAGGGSGYGSNYGGHAMGNQGGYGSSGNHGMSGYAGYGGQSNMGSYGRHGGNSNGAGAYYGNSGGMGMGSNMGGMGSMGGSGAWRMYQ
SIO_010081: hnrnph3
subclass of: SO_0000673
so part of: hnrnph3
location: join(1677263..1677353,1678191..1678223,1678307..1678408,1678501..1678656,1684680..1684823,1685501..1685639,1686730..1686917,1688154..1688246,1689790..1689905,1690039..1690174,1691310..1691393,1691477..1691563,1693563..1693690)
location: region:1677263-1693690:1
so has part: feature:1677263-1677353:1:exon
so has part: feature:1678191-1678223:1:exon
so has part: feature:1678307-1678408:1:exon
so has part: feature:1678501-1678656:1:exon
so has part: feature:1684680-1684823:1:exon
so has part: feature:1685501-1685639:1:exon
so has part: feature:1686730-1686917:1:exon
so has part: feature:1688154-1688246:1:exon
so has part: feature:1689790-1689905:1:exon
so has part: feature:1690039-1690174:1:exon
so has part: feature:1691310-1691393:1:exon
so has part: feature:1691477-1691563:1:exon
so has part: feature:1693563-1693690:1:exon

XP_020371803.1
type: Protein
SIO_000068: ncbiprotein

position:1693690:1
position: 1693690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677263-1677353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678191-1678223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678307-1678408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1678501-1678656:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684680-1684823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685501-1685639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1686730-1686917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1688154-1688246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1689790-1689905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690039-1690174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1691310-1691393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1691477-1691563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1693563-1693690:1:exon

hnrnph3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hnrnph3
product: heterogeneous nuclear ribonucleoprotein H3 (2H9), transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608943.1
SIO_010081: hnrnph3
subclass of: SO_0000673
so part of: hnrnph3
location: join(1684714..1684823,1686730..1686917,1688154..1688246,1689790..1689905,1690039..1690174,1691310..1691393,1691477..1691563,1693563..1694331)
location: region:1684714-1694331:1
so has part: feature:1684714-1684823:1:exon
so has part: feature:1686730-1686917:1:exon
so has part: feature:1688154-1688246:1:exon
so has part: feature:1689790-1689905:1:exon
so has part: feature:1690039-1690174:1:exon
so has part: feature:1691310-1691393:1:exon
so has part: feature:1691477-1691563:1:exon
so has part: feature:1693563-1694331:1:exon

position:1684714:1
position: 1684714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1684714-1684823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1686730-1686917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1688154-1688246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1689790-1689905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1690039-1690174:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1691310-1691393:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1691477-1691563:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1693563-1694331:1:exon

hnrnph3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hnrnph3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein H3 isoform X3
translation: MGQRPGPYDRPMGRGGYFGAGPQRGGVYDRMRRGAGGYGGGYGGYDDYNGYDNYGYGNDEYDCPGAMRGSRGMSNHGYGGAGDASSGYMSGHFVHMRGLPFRAREDDVAHFFSPLNPLRIHLEYGSDGRATGEADVEFATHEDAVAAMSKDKAHMQHRYIELFLNSTAGGGSGYGSNYGGHAMGNQGGYGSSGNHGMSGYAGYGGQSNMGSYGRHGGNSNGAGAYYGNSGGMGMGSNMGGMGSMGGSGAWRMYQ
SIO_010081: hnrnph3
subclass of: SO_0000673
so part of: hnrnph3
location: join(1686797..1686917,1688154..1688246,1689790..1689905,1690039..1690174,1691310..1691393,1691477..1691563,1693563..1693690)
location: region:1686797-1693690:1
so has part: feature:1686797-1686917:1:exon
so has part: feature:1688154-1688246:1:exon
so has part: feature:1689790-1689905:1:exon
so has part: feature:1690039-1690174:1:exon
so has part: feature:1691310-1691393:1:exon
so has part: feature:1691477-1691563:1:exon
so has part: feature:1693563-1693690:1:exon

XP_048464900.1
type: Protein
SIO_000068: ncbiprotein

position:1686797:1
position: 1686797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1686797-1686917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1688154-1688246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1689790-1689905:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1690039-1690174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1691310-1691393:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1691477-1691563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1693563-1693690:1:exon

rufy2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: rufy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1695930..1764471)
location: region:1695930-1764471:-1
so has part: feature:1695930-1764471:-1:exon
subclass of: SO_0000010

109921195
type: Gene
SIO_000068: ncbigene

position:1695930:-1
position: 1695930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764471:-1
position: 1764471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1695930-1764471:-1:exon

rufy2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rufy2
product: RUN and FYVE domain containing 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608942.1
SIO_010081: rufy2
subclass of: SO_0000673
so part of: rufy2
location: complement(join(1695930..1697076,1700860..1700937,1714228..1714276,1715775..1715869,1717656..1717785,1725635..1725732,1733317..1733484,1740008..1740124,1740886..1740987,1742305..1742374,1747244..1747309,1747960..1748024,1749830..1749953,1750968..1751069,1763103..1763220,1763763..1763936,1764151..1764471))
location: region:1695930-1764471:-1
so has part: feature:1764151-1764471:-1:exon
so has part: feature:1763763-1763936:-1:exon
so has part: feature:1763103-1763220:-1:exon
so has part: feature:1750968-1751069:-1:exon
so has part: feature:1749830-1749953:-1:exon
so has part: feature:1747960-1748024:-1:exon
so has part: feature:1747244-1747309:-1:exon
so has part: feature:1742305-1742374:-1:exon
so has part: feature:1740886-1740987:-1:exon
so has part: feature:1740008-1740124:-1:exon
so has part: feature:1733317-1733484:-1:exon
so has part: feature:1725635-1725732:-1:exon
so has part: feature:1717656-1717785:-1:exon
so has part: feature:1715775-1715869:-1:exon
so has part: feature:1714228-1714276:-1:exon
so has part: feature:1700860-1700937:-1:exon
so has part: feature:1695930-1697076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1764151-1764471:-1:exon

position:1764151:-1
position: 1764151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1763763-1763936:-1:exon

position:1763763:-1
position: 1763763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763936:-1
position: 1763936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1763103-1763220:-1:exon

position:1763103:-1
position: 1763103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763220:-1
position: 1763220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1750968-1751069:-1:exon

position:1750968:-1
position: 1750968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751069:-1
position: 1751069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1749830-1749953:-1:exon

position:1749830:-1
position: 1749830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749953:-1
position: 1749953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1747960-1748024:-1:exon

position:1747960:-1
position: 1747960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1748024:-1
position: 1748024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1747244-1747309:-1:exon

position:1747244:-1
position: 1747244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747309:-1
position: 1747309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1742305-1742374:-1:exon

position:1742305:-1
position: 1742305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742374:-1
position: 1742374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1740886-1740987:-1:exon

position:1740886:-1
position: 1740886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740987:-1
position: 1740987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1740008-1740124:-1:exon

position:1740008:-1
position: 1740008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740124:-1
position: 1740124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1733317-1733484:-1:exon

position:1733317:-1
position: 1733317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733484:-1
position: 1733484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1725635-1725732:-1:exon

position:1725635:-1
position: 1725635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725732:-1
position: 1725732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1717656-1717785:-1:exon

position:1717656:-1
position: 1717656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717785:-1
position: 1717785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1715775-1715869:-1:exon

position:1715775:-1
position: 1715775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715869:-1
position: 1715869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1714228-1714276:-1:exon

position:1714228:-1
position: 1714228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714276:-1
position: 1714276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1700860-1700937:-1:exon

position:1700860:-1
position: 1700860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1700937:-1
position: 1700937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1695930-1697076:-1:exon

position:1697076:-1
position: 1697076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rufy2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rufy2
product: RUN and FYVE domain containing 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608941.1
SIO_010081: rufy2
subclass of: SO_0000673
so part of: rufy2
location: complement(join(1695930..1697076,1700860..1700937,1714228..1714276,1715775..1715869,1717656..1717785,1720405..1720524,1725635..1725732,1733317..1733484,1740008..1740124,1742305..1742374,1747244..1747309,1747960..1748024,1749830..1749953,1750968..1751069,1763103..1763220,1763763..1763936,1764151..1764456))
location: region:1695930-1764456:-1
so has part: feature:1764151-1764456:-1:exon
so has part: feature:1763763-1763936:-1:exon
so has part: feature:1763103-1763220:-1:exon
so has part: feature:1750968-1751069:-1:exon
so has part: feature:1749830-1749953:-1:exon
so has part: feature:1747960-1748024:-1:exon
so has part: feature:1747244-1747309:-1:exon
so has part: feature:1742305-1742374:-1:exon
so has part: feature:1740008-1740124:-1:exon
so has part: feature:1733317-1733484:-1:exon
so has part: feature:1725635-1725732:-1:exon
so has part: feature:1720405-1720524:-1:exon
so has part: feature:1717656-1717785:-1:exon
so has part: feature:1715775-1715869:-1:exon
so has part: feature:1714228-1714276:-1:exon
so has part: feature:1700860-1700937:-1:exon
so has part: feature:1695930-1697076:-1:exon

position:1764456:-1
position: 1764456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764151-1764456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763763-1763936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763103-1763220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750968-1751069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749830-1749953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747960-1748024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747244-1747309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742305-1742374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1740008-1740124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1733317-1733484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1725635-1725732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1720405-1720524:-1:exon

position:1720405:-1
position: 1720405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1720524:-1
position: 1720524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1717656-1717785:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1715775-1715869:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1714228-1714276:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1700860-1700937:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1695930-1697076:-1:exon

rufy2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rufy2
product: RUN and FYVE domain containing 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608940.1
SIO_010081: rufy2
subclass of: SO_0000673
so part of: rufy2
location: complement(join(1695930..1696079,1700860..1700937,1714228..1714276,1715775..1715869,1717656..1717785,1720405..1720524,1725635..1725732,1733317..1733484,1740008..1740124,1740886..1740987,1742305..1742374,1747244..1747309,1747960..1748024,1749830..1749953,1750968..1751069,1763103..1763220,1763763..1763936,1764151..1764455))
location: region:1695930-1764455:-1
so has part: feature:1764151-1764455:-1:exon
so has part: feature:1763763-1763936:-1:exon
so has part: feature:1763103-1763220:-1:exon
so has part: feature:1750968-1751069:-1:exon
so has part: feature:1749830-1749953:-1:exon
so has part: feature:1747960-1748024:-1:exon
so has part: feature:1747244-1747309:-1:exon
so has part: feature:1742305-1742374:-1:exon
so has part: feature:1740886-1740987:-1:exon
so has part: feature:1740008-1740124:-1:exon
so has part: feature:1733317-1733484:-1:exon
so has part: feature:1725635-1725732:-1:exon
so has part: feature:1720405-1720524:-1:exon
so has part: feature:1717656-1717785:-1:exon
so has part: feature:1715775-1715869:-1:exon
so has part: feature:1714228-1714276:-1:exon
so has part: feature:1700860-1700937:-1:exon
so has part: feature:1695930-1696079:-1:exon

position:1764455:-1
position: 1764455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764151-1764455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763763-1763936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763103-1763220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750968-1751069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749830-1749953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747960-1748024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747244-1747309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742305-1742374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1740886-1740987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740008-1740124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1733317-1733484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725635-1725732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1720405-1720524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1717656-1717785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1715775-1715869:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1714228-1714276:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1700860-1700937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1695930-1696079:-1:exon

position:1696079:-1
position: 1696079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rufy2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rufy2
product: RUN and FYVE domain containing 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608939.1
SIO_010081: rufy2
subclass of: SO_0000673
so part of: rufy2
location: complement(join(1695930..1697076,1700860..1700937,1714228..1714276,1715775..1715869,1717656..1717785,1720405..1720524,1725635..1725732,1733317..1733484,1740008..1740124,1740886..1740987,1742305..1742374,1747244..1747309,1747960..1748024,1749830..1749953,1750968..1751069,1763103..1763220,1763763..1763936,1764151..1764454))
location: region:1695930-1764454:-1
so has part: feature:1764151-1764454:-1:exon
so has part: feature:1763763-1763936:-1:exon
so has part: feature:1763103-1763220:-1:exon
so has part: feature:1750968-1751069:-1:exon
so has part: feature:1749830-1749953:-1:exon
so has part: feature:1747960-1748024:-1:exon
so has part: feature:1747244-1747309:-1:exon
so has part: feature:1742305-1742374:-1:exon
so has part: feature:1740886-1740987:-1:exon
so has part: feature:1740008-1740124:-1:exon
so has part: feature:1733317-1733484:-1:exon
so has part: feature:1725635-1725732:-1:exon
so has part: feature:1720405-1720524:-1:exon
so has part: feature:1717656-1717785:-1:exon
so has part: feature:1715775-1715869:-1:exon
so has part: feature:1714228-1714276:-1:exon
so has part: feature:1700860-1700937:-1:exon
so has part: feature:1695930-1697076:-1:exon

position:1764454:-1
position: 1764454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764151-1764454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763763-1763936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763103-1763220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750968-1751069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749830-1749953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747960-1748024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747244-1747309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742305-1742374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1740886-1740987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740008-1740124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1733317-1733484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725635-1725732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1720405-1720524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1717656-1717785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1715775-1715869:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1714228-1714276:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1700860-1700937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1695930-1697076:-1:exon

rufy2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rufy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN and FYVE domain-containing protein 2 isoform X2
translation: MESVEPELPPGLGDGESRDRERPFGILRLQDERSPGSRVGQGAGAGTEPTWQAPIFAFARKASETFSAAAPARDPVVEEASRGLKDPMAIERTNLLNMANLSIKGLIESALSFGRTLDSDYAPLQQFFVVLEHCLKHGLKVKKSFLGQNKSLWGPLELVEKLCPEATEIAASVRDLPGLKTPLGRARAWLRLAMMQKKLADYLRCMIIRRDLFSEFYEEHAVMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSLVGVIDFSMYLKNDNDSNGCCERDGQIAAILDQKNYVEELNRQLSSTVGSLQGRVDSLEKANSKLIEELAIAKNSIIRLQEENVQFRNENIQMLMKTQQHLELVKLDVSAELETYKGTRQGLDDMFTEARRQLREESRMRQDVESDLLVQINMKQEMELAMKLLEKDIHEKQDALISLRHQLEEVKAINVEMFQKLKGSEDGLKQKSEMMTRLEEKTNQVTAAMKRMEQRLQQAEKDQDTAEKGTDKFKRELEDKVENLEREMEQKERQLVQLETDLKIEKEWRRALQNDLQRESETISELRAQTLQLSTLKKEFLRLQEENGQLQTICEEQEQALQELGYKLSESKLKIETIKEANKALQGLVWLKDRDATSCKLCEREFSISTRKTALRSTQWDSISLDFSGFI
SIO_010081: rufy2
subclass of: SO_0000673
so part of: rufy2
location: complement(join(1696020..1696079,1700860..1700937,1714228..1714276,1715775..1715869,1717656..1717785,1720405..1720524,1725635..1725732,1733317..1733484,1740008..1740124,1740886..1740987,1742305..1742374,1747244..1747309,1747960..1748024,1749830..1749953,1750968..1751069,1763103..1763220,1763763..1763936,1764151..1764397))
location: region:1696020-1764397:-1
so has part: feature:1764151-1764397:-1:exon
so has part: feature:1763763-1763936:-1:exon
so has part: feature:1763103-1763220:-1:exon
so has part: feature:1750968-1751069:-1:exon
so has part: feature:1749830-1749953:-1:exon
so has part: feature:1747960-1748024:-1:exon
so has part: feature:1747244-1747309:-1:exon
so has part: feature:1742305-1742374:-1:exon
so has part: feature:1740886-1740987:-1:exon
so has part: feature:1740008-1740124:-1:exon
so has part: feature:1733317-1733484:-1:exon
so has part: feature:1725635-1725732:-1:exon
so has part: feature:1720405-1720524:-1:exon
so has part: feature:1717656-1717785:-1:exon
so has part: feature:1715775-1715869:-1:exon
so has part: feature:1714228-1714276:-1:exon
so has part: feature:1700860-1700937:-1:exon
so has part: feature:1696020-1696079:-1:exon

XP_048464897.1
type: Protein
SIO_000068: ncbiprotein

position:1696020:-1
position: 1696020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764397:-1
position: 1764397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764151-1764397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763763-1763936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763103-1763220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750968-1751069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749830-1749953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747960-1748024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747244-1747309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742305-1742374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1740886-1740987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740008-1740124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1733317-1733484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725635-1725732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1720405-1720524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1717656-1717785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1715775-1715869:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1714228-1714276:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1700860-1700937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1696020-1696079:-1:exon

rufy2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rufy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN and FYVE domain-containing protein 2 isoform X3
translation: MESVEPELPPGLGDGESRDRERPFGILRLQDERSPGSRVGQGAGAGTEPTWQAPIFAFARKASETFSAAAPARDPVVEEASRGLKDPMAIERTNLLNMANLSIKGLIESALSFGRTLDSDYAPLQQFFVVLEHCLKHGLKVKKSFLGQNKSLWGPLELVEKLCPEATEIAASVRDLPGLKTPLGRARAWLRLAMMQKKLADYLRCMIIRRDLFSEFYEEHAVMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSLVGVIDFSMYLKNDNDSNGCCERDGQIAAILDQKNYVEELNRQLSSTVGSLQGRVDSLEKANSKLIEELVKLDVSAELETYKGTRQGLDDMFTEARRQLREESRMRQDVESDLLVQINMKQEMELAMKLLEKDIHEKQDALISLRHQLEEVKAINVEMFQKLKGSEDGLKQKSEMMTRLEEKTNQVTAAMKRMEQRLQQAEKDQDTAEKGTDKFKRELEDKVENLEREMEQKERQLVQLETDLKIEKEWRRALQNDLQRESETISELRAQTLQLSTLKKEFLRLQEENGQLQTICEEQEQALQELGYKLSESKLKIETIKEANKALQGLVWLKDRDATSCKLCEREFSISTRKHHCRNCGEIFCNACSDNELPLPSSPKPVRVCDTCHALLLQRCSSTT
SIO_010081: rufy2
subclass of: SO_0000673
so part of: rufy2
location: complement(join(1696936..1697076,1700860..1700937,1714228..1714276,1715775..1715869,1717656..1717785,1720405..1720524,1725635..1725732,1733317..1733484,1740008..1740124,1742305..1742374,1747244..1747309,1747960..1748024,1749830..1749953,1750968..1751069,1763103..1763220,1763763..1763936,1764151..1764397))
location: region:1696936-1764397:-1
so has part: feature:1764151-1764397:-1:exon
so has part: feature:1763763-1763936:-1:exon
so has part: feature:1763103-1763220:-1:exon
so has part: feature:1750968-1751069:-1:exon
so has part: feature:1749830-1749953:-1:exon
so has part: feature:1747960-1748024:-1:exon
so has part: feature:1747244-1747309:-1:exon
so has part: feature:1742305-1742374:-1:exon
so has part: feature:1740008-1740124:-1:exon
so has part: feature:1733317-1733484:-1:exon
so has part: feature:1725635-1725732:-1:exon
so has part: feature:1720405-1720524:-1:exon
so has part: feature:1717656-1717785:-1:exon
so has part: feature:1715775-1715869:-1:exon
so has part: feature:1714228-1714276:-1:exon
so has part: feature:1700860-1700937:-1:exon
so has part: feature:1696936-1697076:-1:exon

XP_048464898.1
type: Protein
SIO_000068: ncbiprotein

position:1696936:-1
position: 1696936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764151-1764397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763763-1763936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763103-1763220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750968-1751069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749830-1749953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747960-1748024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747244-1747309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742305-1742374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1740008-1740124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1733317-1733484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1725635-1725732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1720405-1720524:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1717656-1717785:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1715775-1715869:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1714228-1714276:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1700860-1700937:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1696936-1697076:-1:exon

rufy2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rufy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN and FYVE domain-containing protein 2 isoform X4
translation: MESVEPELPPGLGDGESRDRERPFGILRLQDERSPGSRVGQGAGAGTEPTWQAPIFAFARKASETFSAAAPARDPVVEEASRGLKDPMAIERTNLLNMANLSIKGLIESALSFGRTLDSDYAPLQQFFVVLEHCLKHGLKVKKSFLGQNKSLWGPLELVEKLCPEATEIAASVRDLPGLKTPLGRARAWLRLAMMQKKLADYLRCMIIRRDLFSEFYEEHAVMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSLVGVIDFSMYLKNDNDSNGCCERDGQIAAILDQKNYVEELNRQLSSTVGSLQGRVDSLEKANSKLIEELAIAKNSIIRLQEENVQFRNENIQMLMKTQQHLELVKLDVSAELETYKGTRQGLDDMFTEARRQLREESRMRQDVESDLLVQINMKQEMELAMKLLEKDIHEKQDALISLRHQLEEVKAINVEMFQKLKGSEDGLKQKSEMMTRLEEKTNQVTAAMKRMEQRVQLETDLKIEKEWRRALQNDLQRESETISELRAQTLQLSTLKKEFLRLQEENGQLQTICEEQEQALQELGYKLSESKLKIETIKEANKALQGLVWLKDRDATSCKLCEREFSISTRKHHCRNCGEIFCNACSDNELPLPSSPKPVRVCDTCHALLLQRCSSTT
SIO_010081: rufy2
subclass of: SO_0000673
so part of: rufy2
location: complement(join(1696936..1697076,1700860..1700937,1714228..1714276,1715775..1715869,1717656..1717785,1725635..1725732,1733317..1733484,1740008..1740124,1740886..1740987,1742305..1742374,1747244..1747309,1747960..1748024,1749830..1749953,1750968..1751069,1763103..1763220,1763763..1763936,1764151..1764397))
location: region:1696936-1764397:-1
so has part: feature:1764151-1764397:-1:exon
so has part: feature:1763763-1763936:-1:exon
so has part: feature:1763103-1763220:-1:exon
so has part: feature:1750968-1751069:-1:exon
so has part: feature:1749830-1749953:-1:exon
so has part: feature:1747960-1748024:-1:exon
so has part: feature:1747244-1747309:-1:exon
so has part: feature:1742305-1742374:-1:exon
so has part: feature:1740886-1740987:-1:exon
so has part: feature:1740008-1740124:-1:exon
so has part: feature:1733317-1733484:-1:exon
so has part: feature:1725635-1725732:-1:exon
so has part: feature:1717656-1717785:-1:exon
so has part: feature:1715775-1715869:-1:exon
so has part: feature:1714228-1714276:-1:exon
so has part: feature:1700860-1700937:-1:exon
so has part: feature:1696936-1697076:-1:exon

XP_048464899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1764151-1764397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763763-1763936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763103-1763220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750968-1751069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749830-1749953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747960-1748024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747244-1747309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742305-1742374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1740886-1740987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740008-1740124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1733317-1733484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725635-1725732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1717656-1717785:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1715775-1715869:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1714228-1714276:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1700860-1700937:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1696936-1697076:-1:exon

rufy2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rufy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN and FYVE domain-containing protein 2 isoform X1
translation: MESVEPELPPGLGDGESRDRERPFGILRLQDERSPGSRVGQGAGAGTEPTWQAPIFAFARKASETFSAAAPARDPVVEEASRGLKDPMAIERTNLLNMANLSIKGLIESALSFGRTLDSDYAPLQQFFVVLEHCLKHGLKVKKSFLGQNKSLWGPLELVEKLCPEATEIAASVRDLPGLKTPLGRARAWLRLAMMQKKLADYLRCMIIRRDLFSEFYEEHAVMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSLVGVIDFSMYLKNDNDSNGCCERDGQIAAILDQKNYVEELNRQLSSTVGSLQGRVDSLEKANSKLIEELAIAKNSIIRLQEENVQFRNENIQMLMKTQQHLELVKLDVSAELETYKGTRQGLDDMFTEARRQLREESRMRQDVESDLLVQINMKQEMELAMKLLEKDIHEKQDALISLRHQLEEVKAINVEMFQKLKGSEDGLKQKSEMMTRLEEKTNQVTAAMKRMEQRLQQAEKDQDTAEKGTDKFKRELEDKVENLEREMEQKERQLVQLETDLKIEKEWRRALQNDLQRESETISELRAQTLQLSTLKKEFLRLQEENGQLQTICEEQEQALQELGYKLSESKLKIETIKEANKALQGLVWLKDRDATSCKLCEREFSISTRKHHCRNCGEIFCNACSDNELPLPSSPKPVRVCDTCHALLLQRCSSTT
SIO_010081: rufy2
subclass of: SO_0000673
so part of: rufy2
location: complement(join(1696936..1697076,1700860..1700937,1714228..1714276,1715775..1715869,1717656..1717785,1720405..1720524,1725635..1725732,1733317..1733484,1740008..1740124,1740886..1740987,1742305..1742374,1747244..1747309,1747960..1748024,1749830..1749953,1750968..1751069,1763103..1763220,1763763..1763936,1764151..1764397))
location: region:1696936-1764397:-1
so has part: feature:1764151-1764397:-1:exon
so has part: feature:1763763-1763936:-1:exon
so has part: feature:1763103-1763220:-1:exon
so has part: feature:1750968-1751069:-1:exon
so has part: feature:1749830-1749953:-1:exon
so has part: feature:1747960-1748024:-1:exon
so has part: feature:1747244-1747309:-1:exon
so has part: feature:1742305-1742374:-1:exon
so has part: feature:1740886-1740987:-1:exon
so has part: feature:1740008-1740124:-1:exon
so has part: feature:1733317-1733484:-1:exon
so has part: feature:1725635-1725732:-1:exon
so has part: feature:1720405-1720524:-1:exon
so has part: feature:1717656-1717785:-1:exon
so has part: feature:1715775-1715869:-1:exon
so has part: feature:1714228-1714276:-1:exon
so has part: feature:1700860-1700937:-1:exon
so has part: feature:1696936-1697076:-1:exon

XP_048464896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1764151-1764397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763763-1763936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763103-1763220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750968-1751069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749830-1749953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747960-1748024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747244-1747309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742305-1742374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1740886-1740987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740008-1740124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1733317-1733484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725635-1725732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1720405-1720524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1717656-1717785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1715775-1715869:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1714228-1714276:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1700860-1700937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1696936-1697076:-1:exon

si:ch211-250c4.3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: si:ch211-250c4.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1784192..1839814)
location: region:1784192-1839814:-1
so has part: feature:1784192-1839814:-1:exon
subclass of: SO_0000010

109921197
type: Gene
SIO_000068: ncbigene

position:1784192:-1
position: 1784192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839814:-1
position: 1839814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1784192-1839814:-1:exon

si:ch211-250c4.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: si:ch211-250c4.3
product: uncharacterized protein LOC100535981 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048608944.1
SIO_010081: si:ch211-250c4.3
subclass of: SO_0000673
so part of: si:ch211-250c4.3
location: complement(join(1784192..1784611,1791478..1791596,1792494..1792609,1798598..1798731,1799592..1799763,1808991..1809152,1827926..1828668,1839719..1839814))
location: region:1784192-1839814:-1
so has part: feature:1839719-1839814:-1:exon
so has part: feature:1827926-1828668:-1:exon
so has part: feature:1808991-1809152:-1:exon
so has part: feature:1799592-1799763:-1:exon
so has part: feature:1798598-1798731:-1:exon
so has part: feature:1792494-1792609:-1:exon
so has part: feature:1791478-1791596:-1:exon
so has part: feature:1784192-1784611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1839719-1839814:-1:exon

position:1839719:-1
position: 1839719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1827926-1828668:-1:exon

position:1827926:-1
position: 1827926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828668:-1
position: 1828668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1808991-1809152:-1:exon

position:1808991:-1
position: 1808991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809152:-1
position: 1809152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1799592-1799763:-1:exon

position:1799592:-1
position: 1799592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1799763:-1
position: 1799763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1798598-1798731:-1:exon

position:1798598:-1
position: 1798598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798731:-1
position: 1798731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1792494-1792609:-1:exon

position:1792494:-1
position: 1792494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792609:-1
position: 1792609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1791478-1791596:-1:exon

position:1791478:-1
position: 1791478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1791596:-1
position: 1791596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1784192-1784611:-1:exon

position:1784611:-1
position: 1784611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:ch211-250c4.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: si:ch211-250c4.3
product: uncharacterized protein LOC100535981 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048608946.1
SIO_010081: si:ch211-250c4.3
subclass of: SO_0000673
so part of: si:ch211-250c4.3
location: complement(join(1784192..1784611,1792494..1792609,1798598..1798731,1799592..1799763,1808991..1809152,1827926..1828668,1839719..1839813))
location: region:1784192-1839813:-1
so has part: feature:1839719-1839813:-1:exon
so has part: feature:1827926-1828668:-1:exon
so has part: feature:1808991-1809152:-1:exon
so has part: feature:1799592-1799763:-1:exon
so has part: feature:1798598-1798731:-1:exon
so has part: feature:1792494-1792609:-1:exon
so has part: feature:1784192-1784611:-1:exon

position:1839813:-1
position: 1839813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839719-1839813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1827926-1828668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808991-1809152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1799592-1799763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798598-1798731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1792494-1792609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1784192-1784611:-1:exon

si:ch211-250c4.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: si:ch211-250c4.3
product: uncharacterized protein LOC100535981 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048608945.1
SIO_010081: si:ch211-250c4.3
subclass of: SO_0000673
so part of: si:ch211-250c4.3
location: complement(join(1784192..1784611,1791478..1791596,1792494..1792609,1798598..1798731,1799592..1799763,1808991..1809152,1827926..1828668,1832647..1832933))
location: region:1784192-1832933:-1
so has part: feature:1832647-1832933:-1:exon
so has part: feature:1827926-1828668:-1:exon
so has part: feature:1808991-1809152:-1:exon
so has part: feature:1799592-1799763:-1:exon
so has part: feature:1798598-1798731:-1:exon
so has part: feature:1792494-1792609:-1:exon
so has part: feature:1791478-1791596:-1:exon
so has part: feature:1784192-1784611:-1:exon

position:1832933:-1
position: 1832933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1832647-1832933:-1:exon

position:1832647:-1
position: 1832647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1827926-1828668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808991-1809152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1799592-1799763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798598-1798731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1792494-1792609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1791478-1791596:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1784192-1784611:-1:exon

si:ch211-250c4.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: si:ch211-250c4.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:ch211-250c4.3 isoform X3
translation: MGPFGPAEIIWIPFWKTLNLFQVVRQESCKKKVVLTKVTPLQNGSQSEDTLSHPVPAKTGNPETNPAEEAERLKSGFQSSFSECATVAEPSNCSILKLYKSESEDSGVELPSGTNSPSTPSGSEQSFVVHRRESSCDSGMALSIVSSSPGVQHCPFTADRHNPDQCSKEDSRPRDAPVKVKKLPTATANWKKTNNPSRNTNQSPTVINEEVTQPRHVSLVEIVIADTNSAKLNGAGKHVSETPFNQETLKRRPSSDSLNDYMEECCRLSQVNQEKVGDRGSGLGYLEHICQLVETIGQLQEQNKQLQKQAWITERALKVNRMKEDFFLNHCSCGAVGIYQSLANLPDLQIGSCSSSPSHGISLKRENTAQSMERTESNSQQAEDTQPNGREWSRKHMCRKTLSQPDLMLGHEGLSEHNSHCQDHQDEEGQSTGKIKLLPRDSKLKNHPVRDSFAMLKQSCPQLYR
SIO_010081: si:ch211-250c4.3
subclass of: SO_0000673
so part of: si:ch211-250c4.3
location: complement(join(1784608..1784611,1792494..1792609,1798598..1798731,1799592..1799763,1808991..1809152,1827926..1828668,1839719..1839785))
location: region:1784608-1839785:-1
so has part: feature:1839719-1839785:-1:exon
so has part: feature:1827926-1828668:-1:exon
so has part: feature:1808991-1809152:-1:exon
so has part: feature:1799592-1799763:-1:exon
so has part: feature:1798598-1798731:-1:exon
so has part: feature:1792494-1792609:-1:exon
so has part: feature:1784608-1784611:-1:exon

XP_048464903.1
type: Protein
SIO_000068: ncbiprotein

position:1784608:-1
position: 1784608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839785:-1
position: 1839785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839719-1839785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1827926-1828668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808991-1809152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1799592-1799763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798598-1798731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1792494-1792609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1784608-1784611:-1:exon

si:ch211-250c4.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: si:ch211-250c4.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:ch211-250c4.3 isoform X1
translation: MGPFGPAEIIWIPFWKTLNLFQVVRQESCKKKVVLTKVTPLQNGSQSEDTLSHPVPAKTGNPETNPAEEAERLKSGFQSSFSECATVAEPSNCSILKLYKSESEDSGVELPSGTNSPSTPSGSEQSFVVHRRESSCDSGMALSIVSSSPGVQHCPFTADRHNPDQCSKEDSRPRDAPVKVKKLPTATANWKKTNNPSRNTNQSPTVINEEVTQPRHVSLVEIVIADTNSAKLNGAGKHVSETPFNQETLKRRPSSDSLNDYMEECCRLSQVNQEKVGDRGSGLGYLEHICQLVETIGQLQEQNKQLQKQAWITERALKVNRMKEDFFLNHCSCGAVGIYQSLANLPDLQIGSCSSSPSHGISLKRENTAQSMERTESNSQQAEDTQPNGREWSRKHMCRKTLSQPDLMLGHEGLSEHNSHCQDHQDEEGQSTGKIKLLPRDSKLKNHPVRDSFAMLKQSCPQLYRPEDGRSSPLIKGTNSASAWGLNRNSDWEHAP
SIO_010081: si:ch211-250c4.3
subclass of: SO_0000673
so part of: si:ch211-250c4.3
location: complement(join(1791500..1791596,1792494..1792609,1798598..1798731,1799592..1799763,1808991..1809152,1827926..1828668,1839719..1839785))
location: region:1791500-1839785:-1
so has part: feature:1839719-1839785:-1:exon
so has part: feature:1827926-1828668:-1:exon
so has part: feature:1808991-1809152:-1:exon
so has part: feature:1799592-1799763:-1:exon
so has part: feature:1798598-1798731:-1:exon
so has part: feature:1792494-1792609:-1:exon
so has part: feature:1791500-1791596:-1:exon

XP_048464901.1
type: Protein
SIO_000068: ncbiprotein

position:1791500:-1
position: 1791500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839719-1839785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1827926-1828668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808991-1809152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1799592-1799763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798598-1798731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1792494-1792609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1791500-1791596:-1:exon

si:ch211-250c4.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: si:ch211-250c4.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:ch211-250c4.3 isoform X2
translation: MMFGRNGIFGAGGSWKKVVRQESCKKKVVLTKVTPLQNGSQSEDTLSHPVPAKTGNPETNPAEEAERLKSGFQSSFSECATVAEPSNCSILKLYKSESEDSGVELPSGTNSPSTPSGSEQSFVVHRRESSCDSGMALSIVSSSPGVQHCPFTADRHNPDQCSKEDSRPRDAPVKVKKLPTATANWKKTNNPSRNTNQSPTVINEEVTQPRHVSLVEIVIADTNSAKLNGAGKHVSETPFNQETLKRRPSSDSLNDYMEECCRLSQVNQEKVGDRGSGLGYLEHICQLVETIGQLQEQNKQLQKQAWITERALKVNRMKEDFFLNHCSCGAVGIYQSLANLPDLQIGSCSSSPSHGISLKRENTAQSMERTESNSQQAEDTQPNGREWSRKHMCRKTLSQPDLMLGHEGLSEHNSHCQDHQDEEGQSTGKIKLLPRDSKLKNHPVRDSFAMLKQSCPQLYRPEDGRSSPLIKGTNSASAWGLNRNSDWEHAP
SIO_010081: si:ch211-250c4.3
subclass of: SO_0000673
so part of: si:ch211-250c4.3
location: complement(join(1791500..1791596,1792494..1792609,1798598..1798731,1799592..1799763,1808991..1809152,1827926..1828668,1832647..1832698))
location: region:1791500-1832698:-1
so has part: feature:1832647-1832698:-1:exon
so has part: feature:1827926-1828668:-1:exon
so has part: feature:1808991-1809152:-1:exon
so has part: feature:1799592-1799763:-1:exon
so has part: feature:1798598-1798731:-1:exon
so has part: feature:1792494-1792609:-1:exon
so has part: feature:1791500-1791596:-1:exon

XP_048464902.1
type: Protein
SIO_000068: ncbiprotein

position:1832698:-1
position: 1832698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1832647-1832698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1827926-1828668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808991-1809152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1799592-1799763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798598-1798731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1792494-1792609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1791500-1791596:-1:exon

LOC109923912
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1883687..1893539)
location: region:1883687-1893539:-1
so has part: feature:1883687-1893539:-1:exon
subclass of: SO_0000010

109923912
type: Gene
SIO_000068: ncbigene

position:1883687:-1
position: 1883687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1893539:-1
position: 1893539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1883687-1893539:-1:exon

LOC109923912
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923912
product: arylamine N-acetyltransferase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048608947.1
SIO_010081: LOC109923912
subclass of: SO_0000673
so part of: LOC109923912
location: complement(join(1883687..1884669,1893496..1893539))
location: region:1883687-1893539:-1
so has part: feature:1893496-1893539:-1:exon
so has part: feature:1883687-1884669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1893496-1893539:-1:exon

position:1893496:-1
position: 1893496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1883687-1884669:-1:exon

position:1884669:-1
position: 1884669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109923912
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 2-like
translation: MKLSEYFARIGYTGPCNKADLETLGRIVENHLTSIPYENLSPHCGETIEVNVEAIFDKVVRKHRGGCCVEHNGLFWWVLKEMGYKVMFIAARLYKPAKDCYESYPSHCILIVTIDSKSYVVDVGFVSSYQPRQPLELVSGKEQSQLPGTYRLTEDNNIWYMDKAVRKLHIEGQSNNSESLQNHPAYQKLFCFALKPCKIEDFQDKLTYLITTPGAMFKELSYVCYQTQNGIKILKGTTYIERIFNGKDGTDVRTSKTLTEEELQHVLKETFNLMLDKKIMHVNNFTHFLIE
SIO_010081: LOC109923912
subclass of: SO_0000673
so part of: LOC109923912
location: complement(1883789..1884664)
location: region:1883789-1884664:-1
so has part: feature:1883789-1884664:-1:exon

XP_048464904.1
type: Protein
SIO_000068: ncbiprotein

position:1883789:-1
position: 1883789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1884664:-1
position: 1884664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1883789-1884664:-1:exon

LOC109917365
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109917365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1927150..1929044)
location: region:1927150-1929044:-1
so has part: feature:1927150-1929044:-1:exon
subclass of: SO_0000010

109917365
type: Gene
SIO_000068: ncbigene

position:1927150:-1
position: 1927150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1929044:-1
position: 1929044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1927150-1929044:-1:exon

LOC109917365
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109917365
product: neuropeptide Y receptor type 4-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020517182.2
SIO_010081: LOC109917365
subclass of: SO_0000673
so part of: LOC109917365
location: complement(join(1927150..1928706,1928944..1929044))
location: region:1927150-1929044:-1
so has part: feature:1928944-1929044:-1:exon
so has part: feature:1927150-1928706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1928944-1929044:-1:exon

position:1928944:-1
position: 1928944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1927150-1928706:-1:exon

position:1928706:-1
position: 1928706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109917365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109917365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropeptide Y receptor type 4-2-like
translation: MEAPVLLSANSSLSGNATDWGHLLDFGNPCPTSAALTIFLLTSYTAVLVVGLLGNICLVCVIARQEKNNVTNLLIANLSLSDLTICVFCLPFTVAYTLMDYWAFGEVLCKMVPFFQCLSVTVSVLSLVMIALERHQLILRPTGWKPSVPQAYVALLLTWSLSAAVSLPFVFFHVLTDELFLNLPVPLAPLVNEAVCTESWPSKEQKLVYTTWLLGFQYCVPLAFITVCYSRIYWRLRTRRDLLDRAGEENRSLPNSRRITLLLGFLVVGFGVCWFPLHVFNAVVDWDVQIIMHCQHNLIFSLCHLAGMASTCVNPIIYGFLNNNFKKELRSIMLRCKWSSKEDGEHFPLSTMNTEFSKASLRLSCRSK
SIO_010081: LOC109917365
subclass of: SO_0000673
so part of: LOC109917365
location: complement(1927474..1928580)
location: region:1927474-1928580:-1
so has part: feature:1927474-1928580:-1:exon

XP_020372771.1
type: Protein
SIO_000068: ncbiprotein

position:1927474:-1
position: 1927474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928580:-1
position: 1928580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1927474-1928580:-1:exon

hells
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: hells
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1935258..1976059)
location: region:1935258-1976059:-1
so has part: feature:1935258-1976059:-1:exon
subclass of: SO_0000010

109922278
type: Gene
SIO_000068: ncbigene

position:1935258:-1
position: 1935258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1976059:-1
position: 1976059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1935258-1976059:-1:exon

hells
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hells
product: helicase, lymphoid specific
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609150.1
SIO_010081: hells
subclass of: SO_0000673
so part of: hells
location: complement(join(1935258..1936919,1938846..1938922,1939330..1939426,1941933..1942092,1944158..1944274,1951408..1951491,1953454..1953635,1972737..1972776,1973318..1973377,1974348..1974470,1975853..1976059))
location: region:1935258-1976059:-1
so has part: feature:1975853-1976059:-1:exon
so has part: feature:1974348-1974470:-1:exon
so has part: feature:1973318-1973377:-1:exon
so has part: feature:1972737-1972776:-1:exon
so has part: feature:1953454-1953635:-1:exon
so has part: feature:1951408-1951491:-1:exon
so has part: feature:1944158-1944274:-1:exon
so has part: feature:1941933-1942092:-1:exon
so has part: feature:1939330-1939426:-1:exon
so has part: feature:1938846-1938922:-1:exon
so has part: feature:1935258-1936919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1975853-1976059:-1:exon

position:1975853:-1
position: 1975853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1974348-1974470:-1:exon

position:1974348:-1
position: 1974348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974470:-1
position: 1974470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1973318-1973377:-1:exon

position:1973318:-1
position: 1973318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973377:-1
position: 1973377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1972737-1972776:-1:exon

position:1972737:-1
position: 1972737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972776:-1
position: 1972776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1953454-1953635:-1:exon

position:1953454:-1
position: 1953454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953635:-1
position: 1953635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1951408-1951491:-1:exon

position:1951408:-1
position: 1951408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951491:-1
position: 1951491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1944158-1944274:-1:exon

position:1944158:-1
position: 1944158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944274:-1
position: 1944274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1941933-1942092:-1:exon

position:1941933:-1
position: 1941933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942092:-1
position: 1942092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1939330-1939426:-1:exon

position:1939330:-1
position: 1939330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1939426:-1
position: 1939426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1938846-1938922:-1:exon

position:1938846:-1
position: 1938846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938922:-1
position: 1938922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1935258-1936919:-1:exon

position:1936919:-1
position: 1936919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hells
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hells
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphoid-specific helicase
translation: MAEPEVNEIITASMLEEERQLEKEGQEEERKLMQQAKMFWEKDSREMRYKRLQHLLEKSNIYSKFLLTKMEQQQLEEQQRKAKLEKKRKLLASTQVVKGDNQPIQETETGDLKVTCTLLCFLFRPVLDVFIPQDKEVHLKLQNVLMLLRKCCNHPYLIEYPLDPKTQEFKIDEELVKSSGKFLILDRMLPELRRRGHKINNFNSDPEVFIFLLSTRAGGLGINLTAADTVVIYDSDWNPQADLQAQDRCHRIGQTKPVVVYRLVTANTIDEKIVEKATAKRRLEKMVIHKNKFKGGKSGLNQSRSCLDSTELMELLKSRDHERVVKGSTDQVISDGELQILMDRSDLGKQRKLGIKTQTDKVFKVLDSDDPNSGIQLCGL
SIO_010081: hells
subclass of: SO_0000673
so part of: hells
location: complement(join(1936822..1936919,1938846..1938922,1939330..1939426,1941933..1942092,1944158..1944274,1951408..1951491,1953454..1953635,1972737..1972776,1973318..1973377,1974348..1974470,1975853..1975957))
location: region:1936822-1975957:-1
so has part: feature:1975853-1975957:-1:exon
so has part: feature:1974348-1974470:-1:exon
so has part: feature:1973318-1973377:-1:exon
so has part: feature:1972737-1972776:-1:exon
so has part: feature:1953454-1953635:-1:exon
so has part: feature:1951408-1951491:-1:exon
so has part: feature:1944158-1944274:-1:exon
so has part: feature:1941933-1942092:-1:exon
so has part: feature:1939330-1939426:-1:exon
so has part: feature:1938846-1938922:-1:exon
so has part: feature:1936822-1936919:-1:exon

XP_048465107.1
type: Protein
SIO_000068: ncbiprotein

position:1936822:-1
position: 1936822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975957:-1
position: 1975957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1975853-1975957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1974348-1974470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1973318-1973377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1972737-1972776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1953454-1953635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1951408-1951491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1944158-1944274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1941933-1942092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1939330-1939426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1938846-1938922:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1936822-1936919:-1:exon

LOC109912406
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109912406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2089394..2194602
location: region:2089394-2194602:1
so has part: feature:2089394-2194602:1:exon
subclass of: SO_0000010

109912406
type: Gene
SIO_000068: ncbigene

position:2089394:1
position: 2089394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2194602:1
position: 2194602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2089394-2194602:1:exon

LOC109912406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109912406
product: broad substrate specificity ATP-binding cassette transporter ABCG2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609151.1
SIO_010081: LOC109912406
subclass of: SO_0000673
so part of: LOC109912406
location: join(2089394..2089521,2106219..2106278,2114695..2114809,2121358..2121510,2140737..2140894,2146986..2147137,2156420..2156551,2162236..2162462,2162572..2162654,2168821..2168910,2172550..2172674,2174348..2174502,2178390..2178479,2181643..2181761,2193887..2194602)
location: region:2089394-2194602:1
so has part: feature:2089394-2089521:1:exon
so has part: feature:2106219-2106278:1:exon
so has part: feature:2114695-2114809:1:exon
so has part: feature:2121358-2121510:1:exon
so has part: feature:2140737-2140894:1:exon
so has part: feature:2146986-2147137:1:exon
so has part: feature:2156420-2156551:1:exon
so has part: feature:2162236-2162462:1:exon
so has part: feature:2162572-2162654:1:exon
so has part: feature:2168821-2168910:1:exon
so has part: feature:2172550-2172674:1:exon
so has part: feature:2174348-2174502:1:exon
so has part: feature:2178390-2178479:1:exon
so has part: feature:2181643-2181761:1:exon
so has part: feature:2193887-2194602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2089394-2089521:1:exon

position:2089521:1
position: 2089521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2106219-2106278:1:exon

position:2106219:1
position: 2106219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2106278:1
position: 2106278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2114695-2114809:1:exon

position:2114695:1
position: 2114695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2114809:1
position: 2114809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2121358-2121510:1:exon

position:2121358:1
position: 2121358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2121510:1
position: 2121510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2140737-2140894:1:exon

position:2140737:1
position: 2140737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2140894:1
position: 2140894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2146986-2147137:1:exon

position:2146986:1
position: 2146986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147137:1
position: 2147137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2156420-2156551:1:exon

position:2156420:1
position: 2156420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2156551:1
position: 2156551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2162236-2162462:1:exon

position:2162236:1
position: 2162236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162462:1
position: 2162462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2162572-2162654:1:exon

position:2162572:1
position: 2162572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162654:1
position: 2162654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2168821-2168910:1:exon

position:2168821:1
position: 2168821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2168910:1
position: 2168910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2172550-2172674:1:exon

position:2172550:1
position: 2172550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2172674:1
position: 2172674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2174348-2174502:1:exon

position:2174348:1
position: 2174348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2174502:1
position: 2174502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2178390-2178479:1:exon

position:2178390:1
position: 2178390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2178479:1
position: 2178479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2181643-2181761:1:exon

position:2181643:1
position: 2181643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2181761:1
position: 2181761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2193887-2194602:1:exon

position:2193887:1
position: 2193887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109912406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109912406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: broad substrate specificity ATP-binding cassette transporter ABCG2-like
translation: MDLMQSSKGSVVSFHNVQYSVNISSGIPYICKVTRKQILYNINGVLNPGLNAILGPTGSGKSSLLDILAARKDCRGLSGQVLIDGIPQPSNFKCISGYVVQDDILMGTLTVRENLLFSAALRLPSSIRFKEKEEKVEQIISQLGLTKVSDSKVGTELIRGVSGGERKRTHIGMELITDPPVLFLDEPTTGLDSNTAKSVLTLLKRLSRYGRTIIFSIHQPQYFIFKLFDSLTLLLNGRMVYHGPANTALQYFSSIGYECETFNNPADFFLDVINGDSTPVVTNSKENHQLAVGLDNENSEKTFAEKLAESYMKSSQYQETVEMLMQIEGIRGDRGIKEIQMQSITYTTSFLHQLFWVSNRIFKNFIRNPQSSIAEVFLNSLLGLFLGAIYFGLKLDSSGIQNRVGSFHFLASYECFSSVSAVALFIQARKIFIHEYISGYYRISAYFLATIIGDLLPVRTLPAIVFSCITYWMVGYQRNLANFLFFMLILLLTSYAATSLAMAVSAGLDTITTAGVVINGIFVFAMTFSGLLVNLPSISKGLNWLQYFSIPRYSFEALQVNEFRNLYFCNHEQRNVTALSQAVANCSGNLSPSKGICYGEEYLCGQGSGFDLWAIWKNITALACITIIFLIIAYVNLRCMKKFT
SIO_010081: LOC109912406
subclass of: SO_0000673
so part of: LOC109912406
location: join(2089394..2089521,2106219..2106278,2114695..2114809,2121358..2121510,2140737..2140894,2146986..2147137,2156420..2156551,2162236..2162462,2162572..2162654,2168821..2168910,2172550..2172674,2174348..2174502,2178390..2178479,2181643..2181761,2193887..2194034)
location: region:2089394-2194034:1
so has part: feature:2089394-2089521:1:exon
so has part: feature:2106219-2106278:1:exon
so has part: feature:2114695-2114809:1:exon
so has part: feature:2121358-2121510:1:exon
so has part: feature:2140737-2140894:1:exon
so has part: feature:2146986-2147137:1:exon
so has part: feature:2156420-2156551:1:exon
so has part: feature:2162236-2162462:1:exon
so has part: feature:2162572-2162654:1:exon
so has part: feature:2168821-2168910:1:exon
so has part: feature:2172550-2172674:1:exon
so has part: feature:2174348-2174502:1:exon
so has part: feature:2178390-2178479:1:exon
so has part: feature:2181643-2181761:1:exon
so has part: feature:2193887-2194034:1:exon

XP_048465108.1
type: Protein
SIO_000068: ncbiprotein

position:2194034:1
position: 2194034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2089394-2089521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2106219-2106278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2114695-2114809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2121358-2121510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2140737-2140894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2146986-2147137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2156420-2156551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2162236-2162462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2162572-2162654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2168821-2168910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2172550-2172674:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2174348-2174502:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2178390-2178479:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2181643-2181761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2193887-2194034:1:exon

LOC109915518
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109915518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2211930..2222332
location: region:2211930-2222332:1
so has part: feature:2211930-2222332:1:exon
subclass of: SO_0000010

109915518
type: Gene
SIO_000068: ncbigene

position:2211930:1
position: 2211930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2222332:1
position: 2222332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211930-2222332:1:exon

LOC109915518
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109915518
product: protein phosphatase 1K, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020515157.2
SIO_010081: LOC109915518
subclass of: SO_0000673
so part of: LOC109915518
location: join(2211930..2211979,2215561..2216007,2216090..2216190,2220462..2220624,2221235..2221379,2221464..2221598,2221817..2222332)
location: region:2211930-2222332:1
so has part: feature:2211930-2211979:1:exon
so has part: feature:2215561-2216007:1:exon
so has part: feature:2216090-2216190:1:exon
so has part: feature:2220462-2220624:1:exon
so has part: feature:2221235-2221379:1:exon
so has part: feature:2221464-2221598:1:exon
so has part: feature:2221817-2222332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2211930-2211979:1:exon

position:2211979:1
position: 2211979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2215561-2216007:1:exon

position:2215561:1
position: 2215561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2216007:1
position: 2216007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2216090-2216190:1:exon

position:2216090:1
position: 2216090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2216190:1
position: 2216190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2220462-2220624:1:exon

position:2220462:1
position: 2220462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2220624:1
position: 2220624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2221235-2221379:1:exon

position:2221235:1
position: 2221235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2221379:1
position: 2221379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2221464-2221598:1:exon

position:2221464:1
position: 2221464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2221598:1
position: 2221598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2221817-2222332:1:exon

position:2221817:1
position: 2221817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109915518
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109915518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1K, mitochondrial-like
translation: MFPVSLVCRHGRLLADKTMKLMHFQQKPPHSCPLSTVSTKMNWAAVEKSKRFPNWENFGIWLDDPVILPPRISALQYKEKIANVGCVCQIGKRKQNEDRFSIAQLQNGLSCFAVFDGHGGADAAEICSQYIGHYIQQNLKIEADLENVLLRSFLQIDSDFIQNTYGLKEGELLTSGTTATVALLNETMLVVASVGDSPAILCREGKAKQLTEDHTPRRKDEKKRIKECGGFIDWNSVGDPYVNGRLAMTRSIGDMDLKPFGVTAQPEVNTVKLEHAKDCFLILTTDGVSGIMEAQEMCDIVKKYQDPSEAAAVVNEQALQYGTQDNVTTMVVPLGAWGKYSTSLGQTSFGRMMVASSRWH
SIO_010081: LOC109915518
subclass of: SO_0000673
so part of: LOC109915518
location: join(2215601..2216007,2216090..2216190,2220462..2220624,2221235..2221379,2221464..2221598,2221817..2221948)
location: region:2215601-2221948:1
so has part: feature:2215601-2216007:1:exon
so has part: feature:2216090-2216190:1:exon
so has part: feature:2220462-2220624:1:exon
so has part: feature:2221235-2221379:1:exon
so has part: feature:2221464-2221598:1:exon
so has part: feature:2221817-2221948:1:exon

XP_020370746.1
type: Protein
SIO_000068: ncbiprotein

position:2215601:1
position: 2215601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2221948:1
position: 2221948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2215601-2216007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2216090-2216190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2220462-2220624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221235-2221379:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2221464-2221598:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2221817-2221948:1:exon

pkd2l1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pkd2l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2238808..2311268)
location: region:2238808-2311268:-1
so has part: feature:2238808-2311268:-1:exon
subclass of: SO_0000010

109915517
type: Gene
SIO_000068: ncbigene

position:2238808:-1
position: 2238808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2311268:-1
position: 2311268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2238808-2311268:-1:exon

pkd2l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pkd2l1
product: polycystic kidney disease 2-like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020515156.1
SIO_010081: pkd2l1
subclass of: SO_0000673
so part of: pkd2l1
location: complement(join(2238808..2239015,2240414..2240544,2245533..2245650,2248244..2248365,2251998..2252096,2254122..2254242,2259343..2259524,2266501..2266671,2267956..2268184,2270532..2270756,2273960..2274207,2290857..2290984,2308289..2308402,2311013..2311268))
location: region:2238808-2311268:-1
so has part: feature:2311013-2311268:-1:exon
so has part: feature:2308289-2308402:-1:exon
so has part: feature:2290857-2290984:-1:exon
so has part: feature:2273960-2274207:-1:exon
so has part: feature:2270532-2270756:-1:exon
so has part: feature:2267956-2268184:-1:exon
so has part: feature:2266501-2266671:-1:exon
so has part: feature:2259343-2259524:-1:exon
so has part: feature:2254122-2254242:-1:exon
so has part: feature:2251998-2252096:-1:exon
so has part: feature:2248244-2248365:-1:exon
so has part: feature:2245533-2245650:-1:exon
so has part: feature:2240414-2240544:-1:exon
so has part: feature:2238808-2239015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2311013-2311268:-1:exon

position:2311013:-1
position: 2311013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2308289-2308402:-1:exon

position:2308289:-1
position: 2308289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2308402:-1
position: 2308402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2290857-2290984:-1:exon

position:2290857:-1
position: 2290857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2290984:-1
position: 2290984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2273960-2274207:-1:exon

position:2273960:-1
position: 2273960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274207:-1
position: 2274207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2270532-2270756:-1:exon

position:2270532:-1
position: 2270532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2270756:-1
position: 2270756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2267956-2268184:-1:exon

position:2267956:-1
position: 2267956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2268184:-1
position: 2268184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2266501-2266671:-1:exon

position:2266501:-1
position: 2266501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2266671:-1
position: 2266671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2259343-2259524:-1:exon

position:2259343:-1
position: 2259343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2259524:-1
position: 2259524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2254122-2254242:-1:exon

position:2254122:-1
position: 2254122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254242:-1
position: 2254242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2251998-2252096:-1:exon

position:2251998:-1
position: 2251998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2252096:-1
position: 2252096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2248244-2248365:-1:exon

position:2248244:-1
position: 2248244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2248365:-1
position: 2248365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2245533-2245650:-1:exon

position:2245533:-1
position: 2245533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2245650:-1
position: 2245650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2240414-2240544:-1:exon

position:2240414:-1
position: 2240414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240544:-1
position: 2240544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2238808-2239015:-1:exon

position:2239015:-1
position: 2239015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pkd2l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pkd2l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycystic kidney disease 2-like 1 protein
translation: MSSVRDNNLKLPIQEVHEMDSLPNKKAWDNAGYEGSPPSSPFKVQTIYNPSSFPSNPYGCEEPPLYPDKGKAAPGCCLTIVKGIRGLWGTKLTENLSNNPELHIRRTLRELLVYVVFLVDICLLTYGMTSSNAYYYTKVMSNLFLSTAVDTGVTFQTIHSMADFWSYAQGPLLNGLYWTKWYNGDSFSHGPHSLIYYENILLGVPRIRQIKVTNNSCVVHKDFRKDINGCYDVYTADTERKSSIRNETAWTYYSESELGGSAHWGKLTVYGGGGYYQDLKTNMAESAAILQNLKDNLWLDRGTRAVFIDFSVYNANINLFCVIRLVVEFPATGGAIPSSQFRTVKLIRYVNNWDYFIIGCEVIFCVFIVYYIVEEILEIRIHKLQYIKCIWNCLDLVVILLSLLSIGFHIFRTIKVNILMGALLTDPESYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYISFNKTMTQLSSTLARCAKDILGFAIMFFIVFFAYAQLGYLLFGTQVANFSTFLKCIFTQFRIILGDFNFDEIDNANRILGPIYFVTYVFFVFFVLLNMFLAIINDTYSEVKADLSVQKSELQITDIIKQGYNKALMKMKLKKERISDVQKTLQNGSKKLDYEDFRSNLKDLGHSDEEINDTFSRFDSDDNKILDEEEQTRMQNELEEKKIALNAEIENLGKNLGCPENSQTLAYMKNNSNKLNNGVTNEDFQMLGHRVVQLERSVSNIVLKLDAISVKVETMEKNKDMVEKLFNIFQKARQPFLSFYSSCVNLETRPQSQS
SIO_010081: pkd2l1
subclass of: SO_0000673
so part of: pkd2l1
location: complement(join(2238808..2239015,2240414..2240544,2245533..2245650,2248244..2248365,2251998..2252096,2254122..2254242,2259343..2259524,2266501..2266671,2267956..2268184,2270532..2270756,2273960..2274207,2290857..2290984,2308289..2308402,2311013..2311268))
location: region:2238808-2311268:-1
so has part: feature:2311013-2311268:-1:exon
so has part: feature:2308289-2308402:-1:exon
so has part: feature:2290857-2290984:-1:exon
so has part: feature:2273960-2274207:-1:exon
so has part: feature:2270532-2270756:-1:exon
so has part: feature:2267956-2268184:-1:exon
so has part: feature:2266501-2266671:-1:exon
so has part: feature:2259343-2259524:-1:exon
so has part: feature:2254122-2254242:-1:exon
so has part: feature:2251998-2252096:-1:exon
so has part: feature:2248244-2248365:-1:exon
so has part: feature:2245533-2245650:-1:exon
so has part: feature:2240414-2240544:-1:exon
so has part: feature:2238808-2239015:-1:exon

XP_020370745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2311013-2311268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2308289-2308402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2290857-2290984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2273960-2274207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2270532-2270756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2267956-2268184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2266501-2266671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2259343-2259524:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2254122-2254242:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2251998-2252096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2248244-2248365:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2245533-2245650:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2240414-2240544:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2238808-2239015:-1:exon

LOC109915519
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109915519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2365163..2366310
location: region:2365163-2366310:1
so has part: feature:2365163-2366310:1:exon
subclass of: SO_0000010

109915519
type: Gene
SIO_000068: ncbigene

position:2365163:1
position: 2365163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2366310:1
position: 2366310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365163-2366310:1:exon

LOC109915519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109915519
product: transcription factor ATOH7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020515158.2
SIO_010081: LOC109915519
subclass of: SO_0000673
so part of: LOC109915519
location: 2365163..2366310
location: region:2365163-2366310:1
so has part: feature:2365163-2366310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2365163-2366310:1:exon

LOC109915519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109915519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor ATOH7-like
translation: MKSSLSASSSGAGSGLTDSPGSGTDRVQSCVRRRMAANARERRRMQGLNNAFDRLRKVVPQWGQDKKLSKYETLQMALSYIVALTRILSEDRRWLYIQCEHIPGAENNQTYLGQAADQKDYYTDRIFPFNHQSFRVVN
SIO_010081: LOC109915519
subclass of: SO_0000673
so part of: LOC109915519
location: 2365553..2365969
location: region:2365553-2365969:1
so has part: feature:2365553-2365969:1:exon

XP_020370747.1
type: Protein
SIO_000068: ncbiprotein

position:2365553:1
position: 2365553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2365969:1
position: 2365969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365553-2365969:1:exon

mypn
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mypn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2389954..2637203)
location: region:2389954-2637203:-1
so has part: feature:2389954-2637203:-1:exon
subclass of: SO_0000010

109920097
type: Gene
SIO_000068: ncbigene

position:2389954:-1
position: 2389954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2637203:-1
position: 2637203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2389954-2637203:-1:exon

mypn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mypn
product: myopalladin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048609091.1
SIO_010081: mypn
subclass of: SO_0000673
so part of: mypn
location: complement(join(2389954..2391740,2395048..2395181,2396395..2396560,2408511..2408718,2415182..2415305,2418710..2418792,2419932..2420081,2420388..2420609,2442187..2442331,2447632..2448288,2514903..2515221,2518307..2518423,2528502..2528525,2530769..2530910,2542319..2542390,2544652..2544778,2550538..2550589,2561164..2561339,2631512..2632474,2637122..2637203))
location: region:2389954-2637203:-1
so has part: feature:2637122-2637203:-1:exon
so has part: feature:2631512-2632474:-1:exon
so has part: feature:2561164-2561339:-1:exon
so has part: feature:2550538-2550589:-1:exon
so has part: feature:2544652-2544778:-1:exon
so has part: feature:2542319-2542390:-1:exon
so has part: feature:2530769-2530910:-1:exon
so has part: feature:2528502-2528525:-1:exon
so has part: feature:2518307-2518423:-1:exon
so has part: feature:2514903-2515221:-1:exon
so has part: feature:2447632-2448288:-1:exon
so has part: feature:2442187-2442331:-1:exon
so has part: feature:2420388-2420609:-1:exon
so has part: feature:2419932-2420081:-1:exon
so has part: feature:2418710-2418792:-1:exon
so has part: feature:2415182-2415305:-1:exon
so has part: feature:2408511-2408718:-1:exon
so has part: feature:2396395-2396560:-1:exon
so has part: feature:2395048-2395181:-1:exon
so has part: feature:2389954-2391740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2637122-2637203:-1:exon

position:2637122:-1
position: 2637122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2631512-2632474:-1:exon

position:2631512:-1
position: 2631512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2632474:-1
position: 2632474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2561164-2561339:-1:exon

position:2561164:-1
position: 2561164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2561339:-1
position: 2561339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2550538-2550589:-1:exon

position:2550538:-1
position: 2550538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2550589:-1
position: 2550589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2544652-2544778:-1:exon

position:2544652:-1
position: 2544652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2544778:-1
position: 2544778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2542319-2542390:-1:exon

position:2542319:-1
position: 2542319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542390:-1
position: 2542390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2530769-2530910:-1:exon

position:2530769:-1
position: 2530769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2530910:-1
position: 2530910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2528502-2528525:-1:exon

position:2528502:-1
position: 2528502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2528525:-1
position: 2528525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2518307-2518423:-1:exon

position:2518307:-1
position: 2518307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518423:-1
position: 2518423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2514903-2515221:-1:exon

position:2514903:-1
position: 2514903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2515221:-1
position: 2515221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2447632-2448288:-1:exon

position:2447632:-1
position: 2447632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2448288:-1
position: 2448288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2442187-2442331:-1:exon

position:2442187:-1
position: 2442187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2442331:-1
position: 2442331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2420388-2420609:-1:exon

position:2420388:-1
position: 2420388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2420609:-1
position: 2420609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2419932-2420081:-1:exon

position:2419932:-1
position: 2419932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2420081:-1
position: 2420081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2418710-2418792:-1:exon

position:2418710:-1
position: 2418710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2418792:-1
position: 2418792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2415182-2415305:-1:exon

position:2415182:-1
position: 2415182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2415305:-1
position: 2415305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2408511-2408718:-1:exon

position:2408511:-1
position: 2408511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408718:-1
position: 2408718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2396395-2396560:-1:exon

position:2396395:-1
position: 2396395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396560:-1
position: 2396560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2395048-2395181:-1:exon

position:2395048:-1
position: 2395048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2395181:-1
position: 2395181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2389954-2391740:-1:exon

position:2391740:-1
position: 2391740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mypn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mypn
product: myopalladin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048609092.1
SIO_010081: mypn
subclass of: SO_0000673
so part of: mypn
location: complement(join(2389954..2391740,2395048..2395181,2396395..2396560,2408511..2408718,2415182..2415305,2418710..2418792,2419932..2420081,2420388..2420609,2442187..2442331,2447632..2448288,2464917..2465068))
location: region:2389954-2465068:-1
so has part: feature:2464917-2465068:-1:exon
so has part: feature:2447632-2448288:-1:exon
so has part: feature:2442187-2442331:-1:exon
so has part: feature:2420388-2420609:-1:exon
so has part: feature:2419932-2420081:-1:exon
so has part: feature:2418710-2418792:-1:exon
so has part: feature:2415182-2415305:-1:exon
so has part: feature:2408511-2408718:-1:exon
so has part: feature:2396395-2396560:-1:exon
so has part: feature:2395048-2395181:-1:exon
so has part: feature:2389954-2391740:-1:exon

position:2465068:-1
position: 2465068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2464917-2465068:-1:exon

position:2464917:-1
position: 2464917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2447632-2448288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2442187-2442331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2420388-2420609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2419932-2420081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2418710-2418792:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2415182-2415305:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2408511-2408718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2396395-2396560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2395048-2395181:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2389954-2391740:-1:exon

mypn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mypn
product: myopalladin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048609093.1
SIO_010081: mypn
subclass of: SO_0000673
so part of: mypn
location: complement(join(2389954..2391740,2395048..2395181,2396395..2396560,2408511..2408718,2415182..2415305,2418710..2418792,2419932..2420081,2420388..2420609,2442187..2442331,2447632..2448288,2460515..2460606))
location: region:2389954-2460606:-1
so has part: feature:2460515-2460606:-1:exon
so has part: feature:2447632-2448288:-1:exon
so has part: feature:2442187-2442331:-1:exon
so has part: feature:2420388-2420609:-1:exon
so has part: feature:2419932-2420081:-1:exon
so has part: feature:2418710-2418792:-1:exon
so has part: feature:2415182-2415305:-1:exon
so has part: feature:2408511-2408718:-1:exon
so has part: feature:2396395-2396560:-1:exon
so has part: feature:2395048-2395181:-1:exon
so has part: feature:2389954-2391740:-1:exon

position:2460606:-1
position: 2460606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2460515-2460606:-1:exon

position:2460515:-1
position: 2460515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2447632-2448288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2442187-2442331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2420388-2420609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2419932-2420081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2418710-2418792:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2415182-2415305:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2408511-2408718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2396395-2396560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2395048-2395181:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2389954-2391740:-1:exon

mypn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mypn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myopalladin isoform X1
translation: MQEENLEASTSISQLLRESYLAEVRIHQEHGEKSRSEATSQHFYYGSKSGVSQDLDGQDESPDLSAFLSQEELDKSVNLAQEAIAQCSDEVKKDEKQINVTCTTKDVYDTLKPAGNRKVLDSAGSSDFPEKLTSQPYHCENFTKRPSSSKESHRELRKQTKNTPYCTEAEAKKDYLSKAADFIEELSSLFKTTSTKRIKPRTCKNSRNRAQTKLGSQAQHSSWSVDERERVHVPFSAQLNDKIITKEESEAIAQAPVISAGTETLTTEAKATEIQSRPLYIEGTEGNPPRFIQRLKSREAAEGSKVQLECIVTGSPTPEVRWYCEGKELKNSPDIQIGYDGNHYTLTISEAFEEDTGRYTCLASNIYGSDTTSAELYIEGLSSSESEQDSVQEDMTRVQDKIDITVATSPPPSNPATVHSEFHQSQPTVNQAPVRPLQQIQSPTNLLQGLDGLPLMAAPVFTKPLQDVTAKEGQLVVLECRIKGSPFPKIEWYREETLIEDSPDFRILQKKPRSMSDSEEICTLVIAEAFSEDSGMFTCTASNKYGTMSSSAQLTVHGTEDNNAVSTNASSSVTVEANVPVQPDKTHLQPSDHLKPKLEGVLVNHQDHKPKAGLRVHFNLPEDDTASESSIEREHISGNGQNSWASGLISPTKEPPPVFAKPKLDPVQLRQLHNQVRLEQQEATLQQLPQQSPTMSSSLPTSFPSTMNLVNSAPQPSVQPNQSSRSPTPRNTQPQSFNYARPKQFVATQNFMPAAVQSYSPSLSPMPVLNTVSERKQCGEENYFGFPLTPAFQDPAKYASQSLPTPLLHSSSTTSATGQSTSSPVPPLPVSQPRIVSPTSINAGNSCPSPAQNPVAFLSSVLPSLPSAPTTNAMGLPKSAPAIPPQGILKKVPKSPRTSIDDDIRDSKDAVIHDLDRKLRFRDDVSQTGQQEYKVSNFEQRLMNEIEFRLERTPVEESDDEIQHEDIPTGKCIAPIFDKKLKHFRVVEGSPVTMSCKLVGIPVPKVYWFKDGKQISKKNEHFKKKRDGDGTCSLYIESATNDDDGNYTVMAVNPQGRNSSSGHLLVQNTPIRGRIVPSVQSKGTRSRVSQGEEPVQERFFCPHFLQAPGDMIAHEGQICRLDCKVSGLPNPDLMWLLNGKPILPDATHKMLVRENGIHSLLIDPLTPADAGTYTCIATNKAGQSSFSLELSIVAKEITKAPVFIEKLRNTGVPEGHPVRIECRVVGMPPPMIFWKKDNETISPYKDRISIQQDTTGYVCLLIQPTKKEDAGWYTVSAKNEAGIASCTARLDLYAQWHRHITQPIRKVRPSGNRYAALAGQGLDFKSAFPSVDNLQFPTKQDVMESDEL
SIO_010081: mypn
subclass of: SO_0000673
so part of: mypn
location: complement(join(2391574..2391740,2395048..2395181,2396395..2396560,2408511..2408718,2415182..2415305,2418710..2418792,2419932..2420081,2420388..2420609,2442187..2442331,2447632..2448288,2514903..2515221,2518307..2518423,2528502..2528525,2530769..2530910,2542319..2542390,2544652..2544778,2550538..2550589,2561164..2561339,2631512..2632473))
location: region:2391574-2632473:-1
so has part: feature:2631512-2632473:-1:exon
so has part: feature:2561164-2561339:-1:exon
so has part: feature:2550538-2550589:-1:exon
so has part: feature:2544652-2544778:-1:exon
so has part: feature:2542319-2542390:-1:exon
so has part: feature:2530769-2530910:-1:exon
so has part: feature:2528502-2528525:-1:exon
so has part: feature:2518307-2518423:-1:exon
so has part: feature:2514903-2515221:-1:exon
so has part: feature:2447632-2448288:-1:exon
so has part: feature:2442187-2442331:-1:exon
so has part: feature:2420388-2420609:-1:exon
so has part: feature:2419932-2420081:-1:exon
so has part: feature:2418710-2418792:-1:exon
so has part: feature:2415182-2415305:-1:exon
so has part: feature:2408511-2408718:-1:exon
so has part: feature:2396395-2396560:-1:exon
so has part: feature:2395048-2395181:-1:exon
so has part: feature:2391574-2391740:-1:exon

XP_048465048.1
type: Protein
SIO_000068: ncbiprotein

position:2391574:-1
position: 2391574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2632473:-1
position: 2632473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2631512-2632473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2561164-2561339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2550538-2550589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2544652-2544778:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2542319-2542390:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2530769-2530910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2528502-2528525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2518307-2518423:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2514903-2515221:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2447632-2448288:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2442187-2442331:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2420388-2420609:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2419932-2420081:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2418710-2418792:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2415182-2415305:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2408511-2408718:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2396395-2396560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2395048-2395181:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2391574-2391740:-1:exon

mypn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mypn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myopalladin isoform X2
translation: MNQLGIITQQLQALCKVCQKGSDPVQLRQLHNQVRLEQQEATLQQLPQQSPTMSSSLPTSFPSTMNLVNSAPQPSVQPNQSSRSPTPRNTQPQSFNYARPKQFVATQNFMPAAVQSYSPSLSPMPVLNTVSERKQCGEENYFGFPLTPAFQDPAKYASQSLPTPLLHSSSTTSATGQSTSSPVPPLPVSQPRIVSPTSINAGNSCPSPAQNPVAFLSSVLPSLPSAPTTNAMGLPKSAPAIPPQGILKKVPKSPRTSIDDDIRDSKDAVIHDLDRKLRFRDDVSQTGQQEYKVSNFEQRLMNEIEFRLERTPVEESDDEIQHEDIPTGKCIAPIFDKKLKHFRVVEGSPVTMSCKLVGIPVPKVYWFKDGKQISKKNEHFKKKRDGDGTCSLYIESATNDDDGNYTVMAVNPQGRNSSSGHLLVQNTPIRGRIVPSVQSKGTRSRVSQGEEPVQERFFCPHFLQAPGDMIAHEGQICRLDCKVSGLPNPDLMWLLNGKPILPDATHKMLVRENGIHSLLIDPLTPADAGTYTCIATNKAGQSSFSLELSIVAKEITKAPVFIEKLRNTGVPEGHPVRIECRVVGMPPPMIFWKKDNETISPYKDRISIQQDTTGYVCLLIQPTKKEDAGWYTVSAKNEAGIASCTARLDLYAQWHRHITQPIRKVRPSGNRYAALAGQGLDFKSAFPSVDNLQFPTKQDVMESDEL
SIO_010081: mypn
subclass of: SO_0000673
so part of: mypn
location: complement(join(2391574..2391740,2395048..2395181,2396395..2396560,2408511..2408718,2415182..2415305,2418710..2418792,2419932..2420081,2420388..2420609,2442187..2442331,2447632..2448288,2464917..2464981))
location: region:2391574-2464981:-1
so has part: feature:2464917-2464981:-1:exon
so has part: feature:2447632-2448288:-1:exon
so has part: feature:2442187-2442331:-1:exon
so has part: feature:2420388-2420609:-1:exon
so has part: feature:2419932-2420081:-1:exon
so has part: feature:2418710-2418792:-1:exon
so has part: feature:2415182-2415305:-1:exon
so has part: feature:2408511-2408718:-1:exon
so has part: feature:2396395-2396560:-1:exon
so has part: feature:2395048-2395181:-1:exon
so has part: feature:2391574-2391740:-1:exon

XP_048465049.1
type: Protein
SIO_000068: ncbiprotein

position:2464981:-1
position: 2464981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2464917-2464981:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2447632-2448288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2442187-2442331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2420388-2420609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2419932-2420081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2418710-2418792:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2415182-2415305:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2408511-2408718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2396395-2396560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2395048-2395181:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2391574-2391740:-1:exon

mypn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mypn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myopalladin isoform X3
translation: MKCPVPVNSGDPVQLRQLHNQVRLEQQEATLQQLPQQSPTMSSSLPTSFPSTMNLVNSAPQPSVQPNQSSRSPTPRNTQPQSFNYARPKQFVATQNFMPAAVQSYSPSLSPMPVLNTVSERKQCGEENYFGFPLTPAFQDPAKYASQSLPTPLLHSSSTTSATGQSTSSPVPPLPVSQPRIVSPTSINAGNSCPSPAQNPVAFLSSVLPSLPSAPTTNAMGLPKSAPAIPPQGILKKVPKSPRTSIDDDIRDSKDAVIHDLDRKLRFRDDVSQTGQQEYKVSNFEQRLMNEIEFRLERTPVEESDDEIQHEDIPTGKCIAPIFDKKLKHFRVVEGSPVTMSCKLVGIPVPKVYWFKDGKQISKKNEHFKKKRDGDGTCSLYIESATNDDDGNYTVMAVNPQGRNSSSGHLLVQNTPIRGRIVPSVQSKGTRSRVSQGEEPVQERFFCPHFLQAPGDMIAHEGQICRLDCKVSGLPNPDLMWLLNGKPILPDATHKMLVRENGIHSLLIDPLTPADAGTYTCIATNKAGQSSFSLELSIVAKEITKAPVFIEKLRNTGVPEGHPVRIECRVVGMPPPMIFWKKDNETISPYKDRISIQQDTTGYVCLLIQPTKKEDAGWYTVSAKNEAGIASCTARLDLYAQWHRHITQPIRKVRPSGNRYAALAGQGLDFKSAFPSVDNLQFPTKQDVMESDEL
SIO_010081: mypn
subclass of: SO_0000673
so part of: mypn
location: complement(join(2391574..2391740,2395048..2395181,2396395..2396560,2408511..2408718,2415182..2415305,2418710..2418792,2419932..2420081,2420388..2420609,2442187..2442331,2447632..2448288,2460515..2460543))
location: region:2391574-2460543:-1
so has part: feature:2460515-2460543:-1:exon
so has part: feature:2447632-2448288:-1:exon
so has part: feature:2442187-2442331:-1:exon
so has part: feature:2420388-2420609:-1:exon
so has part: feature:2419932-2420081:-1:exon
so has part: feature:2418710-2418792:-1:exon
so has part: feature:2415182-2415305:-1:exon
so has part: feature:2408511-2408718:-1:exon
so has part: feature:2396395-2396560:-1:exon
so has part: feature:2395048-2395181:-1:exon
so has part: feature:2391574-2391740:-1:exon

XP_048465050.1
type: Protein
SIO_000068: ncbiprotein

position:2460543:-1
position: 2460543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2460515-2460543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2447632-2448288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2442187-2442331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2420388-2420609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2419932-2420081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2418710-2418792:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2415182-2415305:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2408511-2408718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2396395-2396560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2395048-2395181:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2391574-2391740:-1:exon

herc4
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: herc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2694528..2786213
location: region:2694528-2786213:1
so has part: feature:2694528-2786213:1:exon
subclass of: SO_0000010

109910691
type: Gene
SIO_000068: ncbigene

position:2694528:1
position: 2694528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2786213:1
position: 2786213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694528-2786213:1:exon

herc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: herc4
product: HECT and RLD domain containing E3 ubiquitin protein ligase 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608711.1
SIO_010081: herc4
subclass of: SO_0000673
so part of: herc4
location: join(2694528..2694814,2701438..2701597,2703994..2704070,2707963..2708184,2712026..2712117,2715379..2715509,2716518..2716678,2717236..2717312,2726727..2726851,2738879..2738938,2742665..2742776,2745136..2745325,2745926..2746098,2746247..2746366,2748291..2748389,2750605..2750772,2754479..2754622,2760388..2760554,2763116..2763182,2773582..2773664,2776993..2777176,2783412..2783514,2783639..2786213)
location: region:2694528-2786213:1
so has part: feature:2694528-2694814:1:exon
so has part: feature:2701438-2701597:1:exon
so has part: feature:2703994-2704070:1:exon
so has part: feature:2707963-2708184:1:exon
so has part: feature:2712026-2712117:1:exon
so has part: feature:2715379-2715509:1:exon
so has part: feature:2716518-2716678:1:exon
so has part: feature:2717236-2717312:1:exon
so has part: feature:2726727-2726851:1:exon
so has part: feature:2738879-2738938:1:exon
so has part: feature:2742665-2742776:1:exon
so has part: feature:2745136-2745325:1:exon
so has part: feature:2745926-2746098:1:exon
so has part: feature:2746247-2746366:1:exon
so has part: feature:2748291-2748389:1:exon
so has part: feature:2750605-2750772:1:exon
so has part: feature:2754479-2754622:1:exon
so has part: feature:2760388-2760554:1:exon
so has part: feature:2763116-2763182:1:exon
so has part: feature:2773582-2773664:1:exon
so has part: feature:2776993-2777176:1:exon
so has part: feature:2783412-2783514:1:exon
so has part: feature:2783639-2786213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2694528-2694814:1:exon

position:2694814:1
position: 2694814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2701438-2701597:1:exon

position:2701438:1
position: 2701438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2701597:1
position: 2701597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2703994-2704070:1:exon

position:2703994:1
position: 2703994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2704070:1
position: 2704070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2707963-2708184:1:exon

position:2707963:1
position: 2707963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2708184:1
position: 2708184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2712026-2712117:1:exon

position:2712026:1
position: 2712026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2712117:1
position: 2712117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2715379-2715509:1:exon

position:2715379:1
position: 2715379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2715509:1
position: 2715509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2716518-2716678:1:exon

position:2716518:1
position: 2716518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2716678:1
position: 2716678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2717236-2717312:1:exon

position:2717236:1
position: 2717236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2717312:1
position: 2717312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2726727-2726851:1:exon

position:2726727:1
position: 2726727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2726851:1
position: 2726851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2738879-2738938:1:exon

position:2738879:1
position: 2738879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2738938:1
position: 2738938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2742665-2742776:1:exon

position:2742665:1
position: 2742665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2742776:1
position: 2742776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2745136-2745325:1:exon

position:2745136:1
position: 2745136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2745325:1
position: 2745325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2745926-2746098:1:exon

position:2745926:1
position: 2745926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746098:1
position: 2746098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2746247-2746366:1:exon

position:2746247:1
position: 2746247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746366:1
position: 2746366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2748291-2748389:1:exon

position:2748291:1
position: 2748291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2748389:1
position: 2748389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2750605-2750772:1:exon

position:2750605:1
position: 2750605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2750772:1
position: 2750772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2754479-2754622:1:exon

position:2754479:1
position: 2754479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2754622:1
position: 2754622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2760388-2760554:1:exon

position:2760388:1
position: 2760388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760554:1
position: 2760554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2763116-2763182:1:exon

position:2763116:1
position: 2763116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763182:1
position: 2763182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2773582-2773664:1:exon

position:2773582:1
position: 2773582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2773664:1
position: 2773664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2776993-2777176:1:exon

position:2776993:1
position: 2776993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2777176:1
position: 2777176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2783412-2783514:1:exon

position:2783412:1
position: 2783412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2783514:1
position: 2783514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2783639-2786213:1:exon

position:2783639:1
position: 2783639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

herc4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: herc4
product: HECT and RLD domain containing E3 ubiquitin protein ligase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_007264264.1
SIO_010081: herc4
so part of: herc4
location: join(2694528..2694814,2701438..2701597,2703994..2704070,2707963..2708184,2712026..2712117,2715379..2715509,2716518..2716678,2717236..2717312,2726727..2726851,2738879..2738938,2742665..2742776,2745136..2745325,2745926..2746098,2746247..2746366,2748291..2748389,2750605..2750772,2754479..2754622,2760388..2760554,2773582..2773664,2776993..2777035)
location: region:2694528-2777035:1
so has part: feature:2694528-2694814:1:exon
so has part: feature:2701438-2701597:1:exon
so has part: feature:2703994-2704070:1:exon
so has part: feature:2707963-2708184:1:exon
so has part: feature:2712026-2712117:1:exon
so has part: feature:2715379-2715509:1:exon
so has part: feature:2716518-2716678:1:exon
so has part: feature:2717236-2717312:1:exon
so has part: feature:2726727-2726851:1:exon
so has part: feature:2738879-2738938:1:exon
so has part: feature:2742665-2742776:1:exon
so has part: feature:2745136-2745325:1:exon
so has part: feature:2745926-2746098:1:exon
so has part: feature:2746247-2746366:1:exon
so has part: feature:2748291-2748389:1:exon
so has part: feature:2750605-2750772:1:exon
so has part: feature:2754479-2754622:1:exon
so has part: feature:2760388-2760554:1:exon
so has part: feature:2773582-2773664:1:exon
so has part: feature:2776993-2777035:1:exon

position:2777035:1
position: 2777035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694528-2694814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2701438-2701597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2703994-2704070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2707963-2708184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2712026-2712117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2715379-2715509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716518-2716678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2717236-2717312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726727-2726851:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2738879-2738938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2742665-2742776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2745136-2745325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2745926-2746098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2746247-2746366:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2748291-2748389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2750605-2750772:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2754479-2754622:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2760388-2760554:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2773582-2773664:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2776993-2777035:1:exon

herc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: herc4
product: HECT and RLD domain containing E3 ubiquitin protein ligase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048608712.1
SIO_010081: herc4
subclass of: SO_0000673
so part of: herc4
location: join(2694528..2694814,2701438..2701597,2703994..2704070,2707963..2708184,2712026..2712117,2715379..2715509,2716518..2716678,2717236..2717312,2726727..2726851,2738879..2738938,2742665..2742776,2745136..2745325,2745926..2746098,2746247..2746366,2748291..2748389,2750605..2750772,2754479..2754622,2760388..2760554,2763116..2763182,2770219..2771895)
location: region:2694528-2771895:1
so has part: feature:2694528-2694814:1:exon
so has part: feature:2701438-2701597:1:exon
so has part: feature:2703994-2704070:1:exon
so has part: feature:2707963-2708184:1:exon
so has part: feature:2712026-2712117:1:exon
so has part: feature:2715379-2715509:1:exon
so has part: feature:2716518-2716678:1:exon
so has part: feature:2717236-2717312:1:exon
so has part: feature:2726727-2726851:1:exon
so has part: feature:2738879-2738938:1:exon
so has part: feature:2742665-2742776:1:exon
so has part: feature:2745136-2745325:1:exon
so has part: feature:2745926-2746098:1:exon
so has part: feature:2746247-2746366:1:exon
so has part: feature:2748291-2748389:1:exon
so has part: feature:2750605-2750772:1:exon
so has part: feature:2754479-2754622:1:exon
so has part: feature:2760388-2760554:1:exon
so has part: feature:2763116-2763182:1:exon
so has part: feature:2770219-2771895:1:exon

position:2771895:1
position: 2771895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694528-2694814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2701438-2701597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2703994-2704070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2707963-2708184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2712026-2712117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2715379-2715509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716518-2716678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2717236-2717312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726727-2726851:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2738879-2738938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2742665-2742776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2745136-2745325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2745926-2746098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2746247-2746366:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2748291-2748389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2750605-2750772:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2754479-2754622:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2760388-2760554:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2763116-2763182:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2770219-2771895:1:exon

position:2770219:1
position: 2770219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

herc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: herc4
product: HECT and RLD domain containing E3 ubiquitin protein ligase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048608713.1
SIO_010081: herc4
subclass of: SO_0000673
so part of: herc4
location: join(2694528..2694814,2701438..2701597,2703994..2704070,2707963..2708184,2712026..2712117,2715379..2715509,2716518..2716678,2717236..2717312,2726727..2726851,2738879..2738938,2742665..2742776,2745136..2745325,2745926..2746098,2746247..2746366,2748291..2748389,2750605..2750772,2754479..2754622,2760388..2760554,2763116..2763182,2763775..2764511)
location: region:2694528-2764511:1
so has part: feature:2694528-2694814:1:exon
so has part: feature:2701438-2701597:1:exon
so has part: feature:2703994-2704070:1:exon
so has part: feature:2707963-2708184:1:exon
so has part: feature:2712026-2712117:1:exon
so has part: feature:2715379-2715509:1:exon
so has part: feature:2716518-2716678:1:exon
so has part: feature:2717236-2717312:1:exon
so has part: feature:2726727-2726851:1:exon
so has part: feature:2738879-2738938:1:exon
so has part: feature:2742665-2742776:1:exon
so has part: feature:2745136-2745325:1:exon
so has part: feature:2745926-2746098:1:exon
so has part: feature:2746247-2746366:1:exon
so has part: feature:2748291-2748389:1:exon
so has part: feature:2750605-2750772:1:exon
so has part: feature:2754479-2754622:1:exon
so has part: feature:2760388-2760554:1:exon
so has part: feature:2763116-2763182:1:exon
so has part: feature:2763775-2764511:1:exon

position:2764511:1
position: 2764511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694528-2694814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2701438-2701597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2703994-2704070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2707963-2708184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2712026-2712117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2715379-2715509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716518-2716678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2717236-2717312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726727-2726851:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2738879-2738938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2742665-2742776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2745136-2745325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2745926-2746098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2746247-2746366:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2748291-2748389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2750605-2750772:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2754479-2754622:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2760388-2760554:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2763116-2763182:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2763775-2764511:1:exon

position:2763775:1
position: 2763775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

herc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: herc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC4 isoform X1
translation: MLCWGNTSYGQLGLGGIDEEVVLEPRICEFFQSKKIRDVGCGRRHTVFVLDDGTVYSCGCNDLGQLGHEKARKRPEQIGALDAQNITAVSCGEMHTLALNDSGHVFAWGLAKDGQLGLAVTEESVRVPRNIKSLVEVQITQVACGYHHSLALSKGSQVFSWGQNKNGQLGLGRDIGNQPSPQPVRSLNGVPFVQIAAGGAHSFALSLSGAVFGWGCNKFGQLGLNDEHDRYVPALLKSLRTQKIVYVCCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGYVITQIACGRQHTLAFVTSSGKVYSFGLGGNGQLGTGSTSNRKSPCAVKGAWVPHGGQFLPIINAKNNYCVKRIFSGGDQSFAHYYNLQNSIPPDDFRLPNPSKHILTLNDAIIQKWISYPPGRIPSEATNEIDTVFSSAGCLNGSFLALSNDDHYKTSSKFSGIDMNAARLLFHRLIHSDHPRILQQITASMEKNLIPRLSHSPPDVEALRIYVTLPECPPMNDVNNYITLAIPFGMAIVKLEKVPLKVLENWWATFEPAFFQKVVELYKDVVVFLLRLTKVGMANSERRTWNNFLKTALEVLAILHRVNEKSGQIIQYDKFYIHEVQDLIDIRNDYVNWIQHQVFGVLPDMPITICTYPFVFDAQAKTTLLQTDAILQMQLAVDQAHRQNFSSFFMPVVDTVNPCLVLIVRRGHIVEDTVEVLRKSKNVDFKKPLKVIFVGEEAVDAGGVRKEFFLLIMRDLLDPKYGMFRYYEESRLIWFSFQTFEEIDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLKQKPTLDDLKELMPIVGRSMQQLLDYPEEAVEDIFSLNFTIAVEKFGVTEVKELVPDGANIPVTKYNRQEFVDAYVDYVFNKSIAPLFDGFYEGFHKVCGGKVLQLFQPNELQAMVIGNANYDWKEWEKNTEYRGEYWAEHPTIKLFWEVFHELPLEKKKRFLLFLTGSDRIPIIGMKSLKFIIQPTGGGDEYLPVAHTCFNLLDLPKYTDKETLRTKLVKAIDHYEGFSLV
SIO_010081: herc4
subclass of: SO_0000673
so part of: herc4
location: join(2694589..2694814,2701438..2701597,2703994..2704070,2707963..2708184,2712026..2712117,2715379..2715509,2716518..2716678,2717236..2717312,2726727..2726851,2738879..2738938,2742665..2742776,2745136..2745325,2745926..2746098,2746247..2746366,2748291..2748389,2750605..2750772,2754479..2754622,2760388..2760554,2763116..2763182,2773582..2773664,2776993..2777176,2783412..2783514,2783639..2783847)
location: region:2694589-2783847:1
so has part: feature:2694589-2694814:1:exon
so has part: feature:2701438-2701597:1:exon
so has part: feature:2703994-2704070:1:exon
so has part: feature:2707963-2708184:1:exon
so has part: feature:2712026-2712117:1:exon
so has part: feature:2715379-2715509:1:exon
so has part: feature:2716518-2716678:1:exon
so has part: feature:2717236-2717312:1:exon
so has part: feature:2726727-2726851:1:exon
so has part: feature:2738879-2738938:1:exon
so has part: feature:2742665-2742776:1:exon
so has part: feature:2745136-2745325:1:exon
so has part: feature:2745926-2746098:1:exon
so has part: feature:2746247-2746366:1:exon
so has part: feature:2748291-2748389:1:exon
so has part: feature:2750605-2750772:1:exon
so has part: feature:2754479-2754622:1:exon
so has part: feature:2760388-2760554:1:exon
so has part: feature:2763116-2763182:1:exon
so has part: feature:2773582-2773664:1:exon
so has part: feature:2776993-2777176:1:exon
so has part: feature:2783412-2783514:1:exon
so has part: feature:2783639-2783847:1:exon

XP_048464668.1
type: Protein
SIO_000068: ncbiprotein

position:2694589:1
position: 2694589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2783847:1
position: 2783847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694589-2694814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2701438-2701597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2703994-2704070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2707963-2708184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2712026-2712117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2715379-2715509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716518-2716678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2717236-2717312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726727-2726851:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2738879-2738938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2742665-2742776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2745136-2745325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2745926-2746098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2746247-2746366:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2748291-2748389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2750605-2750772:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2754479-2754622:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2760388-2760554:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2763116-2763182:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2773582-2773664:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2776993-2777176:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2783412-2783514:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2783639-2783847:1:exon

herc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: herc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC4 isoform X2
translation: MLCWGNTSYGQLGLGGIDEEVVLEPRICEFFQSKKIRDVGCGRRHTVFVLDDGTVYSCGCNDLGQLGHEKARKRPEQIGALDAQNITAVSCGEMHTLALNDSGHVFAWGLAKDGQLGLAVTEESVRVPRNIKSLVEVQITQVACGYHHSLALSKGSQVFSWGQNKNGQLGLGRDIGNQPSPQPVRSLNGVPFVQIAAGGAHSFALSLSGAVFGWGCNKFGQLGLNDEHDRYVPALLKSLRTQKIVYVCCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGYVITQIACGRQHTLAFVTSSGKVYSFGLGGNGQLGTGSTSNRKSPCAVKGAWVPHGGQFLPIINAKNNYCVKRIFSGGDQSFAHYYNLQNSIPPDDFRLPNPSKHILTLNDAIIQKWISYPPGRIPSEATNEIDTVFSSAGCLNGSFLALSNDDHYKTSSKFSGIDMNAARLLFHRLIHSDHPRILQQITASMEKNLIPRLSHSPPDVEALRIYVTLPECPPMNDVNNYITLAIPFGMAIVKLEKVPLKVLENWWATFEPAFFQKVVELYKDVVVFLLRLTKVGMANSERRTWNNFLKTALEVLAILHRVNEKSGQIIQYDKFYIHEVQDLIDIRNDYVNWIQHQVFGVLPDMPITICTYPFVFDAQAKTTLLQTDAILQMQLAVDQAHRQNFSSFFMPVVDTVNPCLVLIVRRGHIVEDTVEVLRKSKNVDFKKPLKVIFVGEEAVDAGGVRKEFFLLIMRDLLDPKYGMFRYYEESRLIWFSFQTFEEIDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLKQKPTLDDLKELMPIVGRSMQQLLDYPEEAVEDIFSLNFTLGQIVEFAV
SIO_010081: herc4
subclass of: SO_0000673
so part of: herc4
location: join(2694589..2694814,2701438..2701597,2703994..2704070,2707963..2708184,2712026..2712117,2715379..2715509,2716518..2716678,2717236..2717312,2726727..2726851,2738879..2738938,2742665..2742776,2745136..2745325,2745926..2746098,2746247..2746366,2748291..2748389,2750605..2750772,2754479..2754622,2760388..2760554,2763116..2763182,2770219..2770248)
location: region:2694589-2770248:1
so has part: feature:2694589-2694814:1:exon
so has part: feature:2701438-2701597:1:exon
so has part: feature:2703994-2704070:1:exon
so has part: feature:2707963-2708184:1:exon
so has part: feature:2712026-2712117:1:exon
so has part: feature:2715379-2715509:1:exon
so has part: feature:2716518-2716678:1:exon
so has part: feature:2717236-2717312:1:exon
so has part: feature:2726727-2726851:1:exon
so has part: feature:2738879-2738938:1:exon
so has part: feature:2742665-2742776:1:exon
so has part: feature:2745136-2745325:1:exon
so has part: feature:2745926-2746098:1:exon
so has part: feature:2746247-2746366:1:exon
so has part: feature:2748291-2748389:1:exon
so has part: feature:2750605-2750772:1:exon
so has part: feature:2754479-2754622:1:exon
so has part: feature:2760388-2760554:1:exon
so has part: feature:2763116-2763182:1:exon
so has part: feature:2770219-2770248:1:exon

XP_048464669.1
type: Protein
SIO_000068: ncbiprotein

position:2770248:1
position: 2770248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694589-2694814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2701438-2701597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2703994-2704070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2707963-2708184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2712026-2712117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2715379-2715509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716518-2716678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2717236-2717312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726727-2726851:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2738879-2738938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2742665-2742776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2745136-2745325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2745926-2746098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2746247-2746366:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2748291-2748389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2750605-2750772:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2754479-2754622:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2760388-2760554:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2763116-2763182:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2770219-2770248:1:exon

herc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: herc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC4 isoform X3
translation: MLCWGNTSYGQLGLGGIDEEVVLEPRICEFFQSKKIRDVGCGRRHTVFVLDDGTVYSCGCNDLGQLGHEKARKRPEQIGALDAQNITAVSCGEMHTLALNDSGHVFAWGLAKDGQLGLAVTEESVRVPRNIKSLVEVQITQVACGYHHSLALSKGSQVFSWGQNKNGQLGLGRDIGNQPSPQPVRSLNGVPFVQIAAGGAHSFALSLSGAVFGWGCNKFGQLGLNDEHDRYVPALLKSLRTQKIVYVCCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGYVITQIACGRQHTLAFVTSSGKVYSFGLGGNGQLGTGSTSNRKSPCAVKGAWVPHGGQFLPIINAKNNYCVKRIFSGGDQSFAHYYNLQNSIPPDDFRLPNPSKHILTLNDAIIQKWISYPPGRIPSEATNEIDTVFSSAGCLNGSFLALSNDDHYKTSSKFSGIDMNAARLLFHRLIHSDHPRILQQITASMEKNLIPRLSHSPPDVEALRIYVTLPECPPMNDVNNYITLAIPFGMAIVKLEKVPLKVLENWWATFEPAFFQKVVELYKDVVVFLLRLTKVGMANSERRTWNNFLKTALEVLAILHRVNEKSGQIIQYDKFYIHEVQDLIDIRNDYVNWIQHQVFGVLPDMPITICTYPFVFDAQAKTTLLQTDAILQMQLAVDQAHRQNFSSFFMPVVDTVNPCLVLIVRRGHIVEDTVEVLRKSKNVDFKKPLKVIFVGEEAVDAGGVRKEFFLLIMRDLLDPKYGMFRYYEESRLIWFSFQTFEEIDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLKQKPTLDDLKELMPIVGRSMQQLLDYPEEAVEDIFSLNFTAPP
SIO_010081: herc4
subclass of: SO_0000673
so part of: herc4
location: join(2694589..2694814,2701438..2701597,2703994..2704070,2707963..2708184,2712026..2712117,2715379..2715509,2716518..2716678,2717236..2717312,2726727..2726851,2738879..2738938,2742665..2742776,2745136..2745325,2745926..2746098,2746247..2746366,2748291..2748389,2750605..2750772,2754479..2754622,2760388..2760554,2763116..2763182,2763775..2763786)
location: region:2694589-2763786:1
so has part: feature:2694589-2694814:1:exon
so has part: feature:2701438-2701597:1:exon
so has part: feature:2703994-2704070:1:exon
so has part: feature:2707963-2708184:1:exon
so has part: feature:2712026-2712117:1:exon
so has part: feature:2715379-2715509:1:exon
so has part: feature:2716518-2716678:1:exon
so has part: feature:2717236-2717312:1:exon
so has part: feature:2726727-2726851:1:exon
so has part: feature:2738879-2738938:1:exon
so has part: feature:2742665-2742776:1:exon
so has part: feature:2745136-2745325:1:exon
so has part: feature:2745926-2746098:1:exon
so has part: feature:2746247-2746366:1:exon
so has part: feature:2748291-2748389:1:exon
so has part: feature:2750605-2750772:1:exon
so has part: feature:2754479-2754622:1:exon
so has part: feature:2760388-2760554:1:exon
so has part: feature:2763116-2763182:1:exon
so has part: feature:2763775-2763786:1:exon

XP_048464670.1
type: Protein
SIO_000068: ncbiprotein

position:2763786:1
position: 2763786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694589-2694814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2701438-2701597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2703994-2704070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2707963-2708184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2712026-2712117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2715379-2715509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716518-2716678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2717236-2717312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2726727-2726851:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2738879-2738938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2742665-2742776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2745136-2745325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2745926-2746098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2746247-2746366:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2748291-2748389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2750605-2750772:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2754479-2754622:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2760388-2760554:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2763116-2763182:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2763775-2763786:1:exon

LOC109912080
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109912080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2800953..2806492)
location: region:2800953-2806492:-1
so has part: feature:2800953-2806492:-1:exon
subclass of: SO_0000010

109912080
type: Gene
SIO_000068: ncbigene

position:2800953:-1
position: 2800953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2806492:-1
position: 2806492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800953-2806492:-1:exon

LOC109912080
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109912080
product: cytochrome c oxidase subunit 5B, mitochondrial
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_020511461.2
SIO_010081: LOC109912080
subclass of: SO_0000673
so part of: LOC109912080
location: complement(join(2800953..2801188,2802593..2802692,2805254..2805324,2806327..2806492))
location: region:2800953-2806492:-1
so has part: feature:2806327-2806492:-1:exon
so has part: feature:2805254-2805324:-1:exon
so has part: feature:2802593-2802692:-1:exon
so has part: feature:2800953-2801188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2806327-2806492:-1:exon

position:2806327:-1
position: 2806327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2805254-2805324:-1:exon

position:2805254:-1
position: 2805254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2805324:-1
position: 2805324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2802593-2802692:-1:exon

position:2802593:-1
position: 2802593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2802692:-1
position: 2802692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2800953-2801188:-1:exon

position:2801188:-1
position: 2801188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109912080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109912080
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5B, mitochondrial
translation: MALYRLGRVCTLRGLANGLSRLGAATITVSRPMASSGIPTDEEQSTGLERKTLQAMKKGMDPYSIFKPKEYAGTKEDPHIVPSITEKRLVGCICEEDNTAIVWFWLHSGSPNAVHPVDLTINLSIMSFLISSLTVAIDFLQ
SIO_010081: LOC109912080
subclass of: SO_0000673
so part of: LOC109912080
location: complement(join(2801042..2801188,2802593..2802692,2805254..2805324,2806327..2806435))
location: region:2801042-2806435:-1
so has part: feature:2806327-2806435:-1:exon
so has part: feature:2805254-2805324:-1:exon
so has part: feature:2802593-2802692:-1:exon
so has part: feature:2801042-2801188:-1:exon

XP_020367050.1
type: Protein
SIO_000068: ncbiprotein

position:2801042:-1
position: 2801042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2806435:-1
position: 2806435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2806327-2806435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2805254-2805324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2802593-2802692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2801042-2801188:-1:exon

sirt1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: sirt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2815082..2861041)
location: region:2815082-2861041:-1
so has part: feature:2815082-2861041:-1:exon
subclass of: SO_0000010

109912079
type: Gene
SIO_000068: ncbigene

position:2815082:-1
position: 2815082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2861041:-1
position: 2861041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2815082-2861041:-1:exon

sirt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sirt1
product: sirtuin 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608710.1
SIO_010081: sirt1
subclass of: SO_0000673
so part of: sirt1
location: complement(join(2815082..2817898,2825554..2826144,2828560..2828746,2830592..2830671,2831577..2831724,2841241..2841393,2841816..2842057,2860792..2861041))
location: region:2815082-2861041:-1
so has part: feature:2860792-2861041:-1:exon
so has part: feature:2841816-2842057:-1:exon
so has part: feature:2841241-2841393:-1:exon
so has part: feature:2831577-2831724:-1:exon
so has part: feature:2830592-2830671:-1:exon
so has part: feature:2828560-2828746:-1:exon
so has part: feature:2825554-2826144:-1:exon
so has part: feature:2815082-2817898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2860792-2861041:-1:exon

position:2860792:-1
position: 2860792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2841816-2842057:-1:exon

position:2841816:-1
position: 2841816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2842057:-1
position: 2842057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2841241-2841393:-1:exon

position:2841241:-1
position: 2841241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2841393:-1
position: 2841393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2831577-2831724:-1:exon

position:2831577:-1
position: 2831577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2831724:-1
position: 2831724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2830592-2830671:-1:exon

position:2830592:-1
position: 2830592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2830671:-1
position: 2830671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2828560-2828746:-1:exon

position:2828560:-1
position: 2828560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2828746:-1
position: 2828746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2825554-2826144:-1:exon

position:2825554:-1
position: 2825554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2826144:-1
position: 2826144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2815082-2817898:-1:exon

position:2817898:-1
position: 2817898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sirt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sirt1
product: sirtuin 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608709.1
SIO_010081: sirt1
subclass of: SO_0000673
so part of: sirt1
location: complement(join(2815082..2817898,2825554..2826144,2828560..2828746,2830592..2830671,2831577..2831724,2841241..2841393,2841816..2842057,2848602..2848745,2860792..2861041))
location: region:2815082-2861041:-1
so has part: feature:2860792-2861041:-1:exon
so has part: feature:2848602-2848745:-1:exon
so has part: feature:2841816-2842057:-1:exon
so has part: feature:2841241-2841393:-1:exon
so has part: feature:2831577-2831724:-1:exon
so has part: feature:2830592-2830671:-1:exon
so has part: feature:2828560-2828746:-1:exon
so has part: feature:2825554-2826144:-1:exon
so has part: feature:2815082-2817898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2860792-2861041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2848602-2848745:-1:exon

position:2848602:-1
position: 2848602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2848745:-1
position: 2848745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2841816-2842057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2841241-2841393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2831577-2831724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2830592-2830671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2828560-2828746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2825554-2826144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2815082-2817898:-1:exon

sirt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sirt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-1 isoform X2
translation: MADGDQLRKRARLEGPVSGPATGPTATGTGTGDRRRRMPGAEQQDSGTDTRHDPQSNESPESGAAPGEGPYSFVQQHLMLGTDPRSILKDLLRGSSPPPDLDDMTLWQIVLNILSEPPKRKKRKDINTLEDVVRILKESKKIMVLTGAGVSVSCGIPDFRSRDGIYARLAVDFPDLPDPHAMFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALLDKQERLLRNYTQNIDTLEQVAGIRRIVECHGSFAMASCLMCKYKVDCETIRKDVFNQVVPRCPKCPLDIPLAIMKPDIVFFGENLPEQFHRSMKYDKDEVDLLIVIGSSLKVRPVALIPSSVPHHVPQILINREPLNHLNFDVELLGDCDVVINELFHRLGGEFEELCSNPIKLTEITEKPPRLQKESKCPSFDLPPTPPILTEDSSSCEQEMESHKLTARKDSIAISCEPVAESMTSSVNENPEQSEIEKSLHEKELESKSSVEESSGNCTDEPVEDSCPNLGHHVPSDIKHAKEAFKRGWSTKCPKEQISKRLGDSQYLFLAPNRYIFHGAEVYSDSEGDDCSSSGNSVSDNESCSSQSVGDGEEESEIEEFPHGIEEEGVGAHYGALGMYFEAETEQVTGGNMLSESVENPIQNECEDANLLD
SIO_010081: sirt1
subclass of: SO_0000673
so part of: sirt1
location: complement(join(2817567..2817898,2825554..2826144,2828560..2828746,2830592..2830671,2831577..2831724,2841241..2841393,2841816..2842057,2860792..2860996))
location: region:2817567-2860996:-1
so has part: feature:2860792-2860996:-1:exon
so has part: feature:2841816-2842057:-1:exon
so has part: feature:2841241-2841393:-1:exon
so has part: feature:2831577-2831724:-1:exon
so has part: feature:2830592-2830671:-1:exon
so has part: feature:2828560-2828746:-1:exon
so has part: feature:2825554-2826144:-1:exon
so has part: feature:2817567-2817898:-1:exon

XP_048464667.1
type: Protein
SIO_000068: ncbiprotein

position:2817567:-1
position: 2817567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2860996:-1
position: 2860996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2860792-2860996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2841816-2842057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2841241-2841393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2831577-2831724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2830592-2830671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2828560-2828746:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2825554-2826144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2817567-2817898:-1:exon

sirt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sirt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-1 isoform X1
translation: MADGDQLRKRARLEGPVSGPATGPTATGTGTGDRRRRMPGAEQQDSGTDTRHDPQSNESPESGAAPGEAGLPGEHEVNAASEEIVPNGVRSRESDDDDKTSHASSSDWTPRTRIGAGPYSFVQQHLMLGTDPRSILKDLLRGSSPPPDLDDMTLWQIVLNILSEPPKRKKRKDINTLEDVVRILKESKKIMVLTGAGVSVSCGIPDFRSRDGIYARLAVDFPDLPDPHAMFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALLDKQERLLRNYTQNIDTLEQVAGIRRIVECHGSFAMASCLMCKYKVDCETIRKDVFNQVVPRCPKCPLDIPLAIMKPDIVFFGENLPEQFHRSMKYDKDEVDLLIVIGSSLKVRPVALIPSSVPHHVPQILINREPLNHLNFDVELLGDCDVVINELFHRLGGEFEELCSNPIKLTEITEKPPRLQKESKCPSFDLPPTPPILTEDSSSCEQEMESHKLTARKDSIAISCEPVAESMTSSVNENPEQSEIEKSLHEKELESKSSVEESSGNCTDEPVEDSCPNLGHHVPSDIKHAKEAFKRGWSTKCPKEQISKRLGDSQYLFLAPNRYIFHGAEVYSDSEGDDCSSSGNSVSDNESCSSQSVGDGEEESEIEEFPHGIEEEGVGAHYGALGMYFEAETEQVTGGNMLSESVENPIQNECEDANLLD
SIO_010081: sirt1
subclass of: SO_0000673
so part of: sirt1
location: complement(join(2817567..2817898,2825554..2826144,2828560..2828746,2830592..2830671,2831577..2831724,2841241..2841393,2841816..2842057,2848602..2848745,2860792..2860996))
location: region:2817567-2860996:-1
so has part: feature:2860792-2860996:-1:exon
so has part: feature:2848602-2848745:-1:exon
so has part: feature:2841816-2842057:-1:exon
so has part: feature:2841241-2841393:-1:exon
so has part: feature:2831577-2831724:-1:exon
so has part: feature:2830592-2830671:-1:exon
so has part: feature:2828560-2828746:-1:exon
so has part: feature:2825554-2826144:-1:exon
so has part: feature:2817567-2817898:-1:exon

XP_048464666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2860792-2860996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2848602-2848745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2841816-2842057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2841241-2841393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2831577-2831724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2830592-2830671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2828560-2828746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2825554-2826144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2817567-2817898:-1:exon

dnajc12
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: dnajc12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2866394..2887309
location: region:2866394-2887309:1
so has part: feature:2866394-2887309:1:exon
subclass of: SO_0000010

109925107
type: Gene
SIO_000068: ncbigene

position:2866394:1
position: 2866394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2887309:1
position: 2887309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2866394-2887309:1:exon

dnajc12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dnajc12
product: DnaJ (Hsp40) homolog, subfamily C, member 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_020525084.2
SIO_010081: dnajc12
subclass of: SO_0000673
so part of: dnajc12
location: join(2866394..2866556,2872679..2872757,2887149..2887309)
location: region:2866394-2887309:1
so has part: feature:2866394-2866556:1:exon
so has part: feature:2872679-2872757:1:exon
so has part: feature:2887149-2887309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2866394-2866556:1:exon

position:2866556:1
position: 2866556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2872679-2872757:1:exon

position:2872679:1
position: 2872679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2872757:1
position: 2872757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2887149-2887309:1:exon

position:2887149:1
position: 2887149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dnajc12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dnajc12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 12
translation: MDGIVNRSAQDPENYYQLLGCDELSTTEQIVAEFKAKALTCHPDKHPHNPKAVEQFQKLQQAKETLTNEERRSCYDQWCRSRIVIPFQQWEALSDTVKMVGSLWD
SIO_010081: dnajc12
subclass of: SO_0000673
so part of: dnajc12
location: join(2866479..2866556,2872679..2872757,2887149..2887309)
location: region:2866479-2887309:1
so has part: feature:2866479-2866556:1:exon
so has part: feature:2872679-2872757:1:exon
so has part: feature:2887149-2887309:1:exon

XP_020380673.2
type: Protein
SIO_000068: ncbiprotein

position:2866479:1
position: 2866479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2866479-2866556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2872679-2872757:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2887149-2887309:1:exon

LOC125485607
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2902785..2909610)
location: region:2902785-2909610:-1
so has part: feature:2902785-2909610:-1:exon
subclass of: SO_0000010

125485607
type: Gene
SIO_000068: ncbigene

position:2902785:-1
position: 2902785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909610:-1
position: 2909610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2902785-2909610:-1:exon

LOC125485607
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485607
product: P2X purinoceptor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048609153.1
SIO_010081: LOC125485607
subclass of: SO_0000673
so part of: LOC125485607
location: complement(join(2902785..2902892,2903813..2903963,2909492..2909610))
location: region:2902785-2909610:-1
so has part: feature:2909492-2909610:-1:exon
so has part: feature:2903813-2903963:-1:exon
so has part: feature:2902785-2902892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2909492-2909610:-1:exon

position:2909492:-1
position: 2909492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2903813-2903963:-1:exon

position:2903813:-1
position: 2903813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2903963:-1
position: 2903963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2902785-2902892:-1:exon

position:2902892:-1
position: 2902892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125485607
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 3-like
translation: MGFIEDFFTYETPKSVVVKSWTVGLINRMMQLLIITYFIGWVFIHEKAYQTKETRIESTVITKVKGFGRSQLPNGIEKVMDVADYVIPPQGGDVFSIITATQITENQVQATCPEVWAISLWDVAV
SIO_010081: LOC125485607
subclass of: SO_0000673
so part of: LOC125485607
location: complement(join(2902785..2902892,2903813..2903963,2909492..2909610))
location: region:2902785-2909610:-1
so has part: feature:2909492-2909610:-1:exon
so has part: feature:2903813-2903963:-1:exon
so has part: feature:2902785-2902892:-1:exon

XP_048465110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2909492-2909610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2903813-2903963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2902785-2902892:-1:exon

LOC125485590
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2921725..2927315
location: region:2921725-2927315:1
so has part: feature:2921725-2927315:1:exon
subclass of: SO_0000010

125485590
type: Gene
SIO_000068: ncbigene

position:2921725:1
position: 2921725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2927315:1
position: 2927315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2921725-2927315:1:exon

LOC125485590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485590
product: erythroblast NAD(P)(+)--arginine ADP-ribosyltransferase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048609084.1
SIO_010081: LOC125485590
subclass of: SO_0000673
so part of: LOC125485590
location: join(2921725..2921837,2926275..2927315)
location: region:2921725-2927315:1
so has part: feature:2921725-2921837:1:exon
so has part: feature:2926275-2927315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2921725-2921837:1:exon

position:2921837:1
position: 2921837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2926275-2927315:1:exon

position:2926275:1
position: 2926275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125485590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: erythroblast NAD(P)(+)--arginine ADP-ribosyltransferase-like
translation: MRNLNILVLTFCYCLVWVPPGALGKRPTRFSSELINLGRVRGCEGGESAEENEEEDEEQMEEELSSWLVLLEKERKLNPALDKAWSQAWLEWARMKEGGSSAPGGLRDELVVAVVCYALEYPPPPLGPLYLVFNQASRHCLGAEDLPEACERFRGLHQLLGLALRGLRRAERAQGKEGAPGMVYRGSPRPFWAKVGDTVQFGSFTSTSASRDVAEIFAGGGGVGGTLFHIRTARGASVEELSPFPQEREVLIPPCEAFRVDRVERSEIHGQPRIDLHLTSLQLSGEIRPRCPGPLYLLTLALTLARQLC
SIO_010081: LOC125485590
subclass of: SO_0000673
so part of: LOC125485590
location: join(2921795..2921837,2926275..2927161)
location: region:2921795-2927161:1
so has part: feature:2921795-2921837:1:exon
so has part: feature:2926275-2927161:1:exon

XP_048465041.1
type: Protein
SIO_000068: ncbiprotein

position:2921795:1
position: 2921795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2927161:1
position: 2927161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2921795-2921837:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2926275-2927161:1:exon

LOC109922661
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109922661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3628616..3631772
location: region:3628616-3631772:1
so has part: feature:3628616-3631772:1:exon
subclass of: SO_0000010

109922661
type: Gene
SIO_000068: ncbigene

position:3628616:1
position: 3628616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3631772:1
position: 3631772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3628616-3631772:1:exon

LOC109922661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109922661
product: leucine-rich repeat transmembrane neuronal protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020522701.2
SIO_010081: LOC109922661
subclass of: SO_0000673
so part of: LOC109922661
location: join(3628616..3629160,3630250..3631772)
location: region:3628616-3631772:1
so has part: feature:3628616-3629160:1:exon
so has part: feature:3630250-3631772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3628616-3629160:1:exon

position:3629160:1
position: 3629160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3630250-3631772:1:exon

position:3630250:1
position: 3630250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109922661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109922661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 3
translation: MGFSGIAVLVMAPTVFLSVVSAAADRGCPANCRCHGKIVYCESLSLQEIPPNLSPGSLGLSLRYNSLHQLQPNQFLGLKQLTWLYLDHNYIDQIHEQAFAGAHRLKELILSSNRISTLSNQTFRPVSNLRNLDLSYNQLQALQPEQFRGLRKLQSLHLRSNRLRTVPVRIFQDCRNVEFLDLGYNRIRSLARNAFAGLGRLVELHLEHNQFSKVNLGHFPRLLALRILYLQWNKISVVIQGMSWTWSSLEKLDLSGNEIQAIGPNVFQCVPNLQTLQLDSNKLTTIGQEILESWISLSSISLAGNMWECNRNICSLVNWLKRFKGRKESTMLCAGPKALQGERVMDAVDNYELCIKKQRVSTQAVPRAPARPTFRTRLPKTNTEVKGQPVPAASASPTDASPDPDLGEPVSFHKIIAGSVALFLSVLVILLVIYVSWKRYPASMKQFQQRSLGRRHRKKKRQSLRQMVPSTQEYYVDYKSAHAEATEMLMNGAAPCTFNKSGSRECEV
SIO_010081: LOC109922661
subclass of: SO_0000673
so part of: LOC109922661
location: join(3629157..3629160,3630250..3631772)
location: region:3629157-3631772:1
so has part: feature:3629157-3629160:1:exon
so has part: feature:3630250-3631772:1:exon

XP_020378290.1
type: Protein
SIO_000068: ncbiprotein

position:3629157:1
position: 3629157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3629157-3629160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3630250-3631772:1:exon

slc22a15
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: slc22a15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4602282..4657109)
location: region:4602282-4657109:-1
so has part: feature:4602282-4657109:-1:exon
subclass of: SO_0000010

109921213
type: Gene
SIO_000068: ncbigene

position:4602282:-1
position: 4602282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657109:-1
position: 4657109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4602282-4657109:-1:exon

slc22a15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: slc22a15
product: solute carrier family 22 member 15, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608862.1
SIO_010081: slc22a15
subclass of: SO_0000673
so part of: slc22a15
location: complement(join(4602282..4603220,4605349..4605513,4610520..4610592,4611531..4611654,4612592..4612677,4625741..4625881,4628365..4628586,4640779..4640908,4641890..4642018,4644675..4644807,4649934..4650080,4657004..4657109))
location: region:4602282-4657109:-1
so has part: feature:4657004-4657109:-1:exon
so has part: feature:4649934-4650080:-1:exon
so has part: feature:4644675-4644807:-1:exon
so has part: feature:4641890-4642018:-1:exon
so has part: feature:4640779-4640908:-1:exon
so has part: feature:4628365-4628586:-1:exon
so has part: feature:4625741-4625881:-1:exon
so has part: feature:4612592-4612677:-1:exon
so has part: feature:4611531-4611654:-1:exon
so has part: feature:4610520-4610592:-1:exon
so has part: feature:4605349-4605513:-1:exon
so has part: feature:4602282-4603220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4657004-4657109:-1:exon

position:4657004:-1
position: 4657004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4649934-4650080:-1:exon

position:4649934:-1
position: 4649934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4650080:-1
position: 4650080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4644675-4644807:-1:exon

position:4644675:-1
position: 4644675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4644807:-1
position: 4644807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4641890-4642018:-1:exon

position:4641890:-1
position: 4641890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4642018:-1
position: 4642018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4640779-4640908:-1:exon

position:4640779:-1
position: 4640779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640908:-1
position: 4640908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4628365-4628586:-1:exon

position:4628365:-1
position: 4628365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4628586:-1
position: 4628586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4625741-4625881:-1:exon

position:4625741:-1
position: 4625741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4625881:-1
position: 4625881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4612592-4612677:-1:exon

position:4612592:-1
position: 4612592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4612677:-1
position: 4612677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4611531-4611654:-1:exon

position:4611531:-1
position: 4611531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4611654:-1
position: 4611654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4610520-4610592:-1:exon

position:4610520:-1
position: 4610520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4610592:-1
position: 4610592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4605349-4605513:-1:exon

position:4605349:-1
position: 4605349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4605513:-1
position: 4605513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4602282-4603220:-1:exon

position:4603220:-1
position: 4603220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc22a15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: slc22a15
product: solute carrier family 22 member 15, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608861.1
SIO_010081: slc22a15
subclass of: SO_0000673
so part of: slc22a15
location: complement(join(4602282..4603220,4605349..4605513,4610520..4610592,4611531..4611651,4612592..4612677,4625741..4625881,4628365..4628586,4640779..4640908,4641890..4642054,4644675..4644807,4649934..4650080,4657004..4657109))
location: region:4602282-4657109:-1
so has part: feature:4657004-4657109:-1:exon
so has part: feature:4649934-4650080:-1:exon
so has part: feature:4644675-4644807:-1:exon
so has part: feature:4641890-4642054:-1:exon
so has part: feature:4640779-4640908:-1:exon
so has part: feature:4628365-4628586:-1:exon
so has part: feature:4625741-4625881:-1:exon
so has part: feature:4612592-4612677:-1:exon
so has part: feature:4611531-4611651:-1:exon
so has part: feature:4610520-4610592:-1:exon
so has part: feature:4605349-4605513:-1:exon
so has part: feature:4602282-4603220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4657004-4657109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4649934-4650080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4644675-4644807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4641890-4642054:-1:exon

position:4642054:-1
position: 4642054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4640779-4640908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4628365-4628586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4625741-4625881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4612592-4612677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611531-4611651:-1:exon

position:4611651:-1
position: 4611651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4610520-4610592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4605349-4605513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4602282-4603220:-1:exon

slc22a15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: slc22a15
product: solute carrier family 22 member 15, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608859.1
SIO_010081: slc22a15
subclass of: SO_0000673
so part of: slc22a15
location: complement(join(4602282..4603220,4605349..4605513,4610520..4610592,4611531..4611654,4612592..4612677,4625741..4625881,4628365..4628586,4640779..4640908,4641890..4642054,4644675..4644807,4649934..4650080,4657004..4657109))
location: region:4602282-4657109:-1
so has part: feature:4657004-4657109:-1:exon
so has part: feature:4649934-4650080:-1:exon
so has part: feature:4644675-4644807:-1:exon
so has part: feature:4641890-4642054:-1:exon
so has part: feature:4640779-4640908:-1:exon
so has part: feature:4628365-4628586:-1:exon
so has part: feature:4625741-4625881:-1:exon
so has part: feature:4612592-4612677:-1:exon
so has part: feature:4611531-4611654:-1:exon
so has part: feature:4610520-4610592:-1:exon
so has part: feature:4605349-4605513:-1:exon
so has part: feature:4602282-4603220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4657004-4657109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4649934-4650080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4644675-4644807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4641890-4642054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4640779-4640908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4628365-4628586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4625741-4625881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4612592-4612677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611531-4611654:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4610520-4610592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4605349-4605513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4602282-4603220:-1:exon

slc22a15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: slc22a15
product: solute carrier family 22 member 15, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608863.1
SIO_010081: slc22a15
subclass of: SO_0000673
so part of: slc22a15
location: complement(join(4602282..4603220,4605349..4605513,4610520..4610592,4611531..4611654,4612592..4612677,4625741..4625881,4628365..4628586,4640779..4640908,4641890..4642054,4644675..4644807,4649934..4650080,4650656..4650675))
location: region:4602282-4650675:-1
so has part: feature:4650656-4650675:-1:exon
so has part: feature:4649934-4650080:-1:exon
so has part: feature:4644675-4644807:-1:exon
so has part: feature:4641890-4642054:-1:exon
so has part: feature:4640779-4640908:-1:exon
so has part: feature:4628365-4628586:-1:exon
so has part: feature:4625741-4625881:-1:exon
so has part: feature:4612592-4612677:-1:exon
so has part: feature:4611531-4611654:-1:exon
so has part: feature:4610520-4610592:-1:exon
so has part: feature:4605349-4605513:-1:exon
so has part: feature:4602282-4603220:-1:exon

position:4650675:-1
position: 4650675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4650656-4650675:-1:exon

position:4650656:-1
position: 4650656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4649934-4650080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4644675-4644807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4641890-4642054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4640779-4640908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4628365-4628586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4625741-4625881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4612592-4612677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611531-4611654:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4610520-4610592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4605349-4605513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4602282-4603220:-1:exon

slc22a15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: slc22a15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 15 isoform X3
translation: MFLMTNSVVSPKGEIYVACQSMLIVLVGAQPEYSVNTQEVISTHEELIKHVIFEEDITSIATEWYLIRQEAYKVNLAGSLFFVGLLIGNILFGPLSDRFGRKPIFLTAVAPNYEVFAVTRLLVGLVNGGMSLVAFVLTQEFVGKSYWALTGSLTNLVFAIGIAAFSVIGYYIRDWRTLAAVANCPGVLFFLLFIPIPESPRWLYSQGKTEEAGEVLQYIAQRNGNGKIFVQLKPCAGTLKTGQSAHGVMDLVRYPALRWRTAILMYVWYVCSLVYYGLTLNAGDLKGNRYLNIALYGLVEVPAFPLCLYFIDKSWSGRRKTMAAFLLFAGVACISTMFLPRHLAGLDMGFLLNVTSLALCGKLAVSAAFNIVYVFTAELYPTVIRNAGLGICSMSCRVGGILAPFVPSLKSLNPSMPFIVFGIAGMSGGFLGLLLPETLNKPIAESIEDLHTPAYQKLEDKRKKGVESQDITQSRRSEA
SIO_010081: slc22a15
subclass of: SO_0000673
so part of: slc22a15
location: complement(join(4603173..4603220,4605349..4605513,4610520..4610592,4611531..4611654,4612592..4612677,4625741..4625881,4628365..4628586,4640779..4640908,4641890..4642018,4644675..4644807,4649934..4650080,4657004..4657045))
location: region:4603173-4657045:-1
so has part: feature:4657004-4657045:-1:exon
so has part: feature:4649934-4650080:-1:exon
so has part: feature:4644675-4644807:-1:exon
so has part: feature:4641890-4642018:-1:exon
so has part: feature:4640779-4640908:-1:exon
so has part: feature:4628365-4628586:-1:exon
so has part: feature:4625741-4625881:-1:exon
so has part: feature:4612592-4612677:-1:exon
so has part: feature:4611531-4611654:-1:exon
so has part: feature:4610520-4610592:-1:exon
so has part: feature:4605349-4605513:-1:exon
so has part: feature:4603173-4603220:-1:exon

XP_048464819.1
type: Protein
SIO_000068: ncbiprotein

position:4603173:-1
position: 4603173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657045:-1
position: 4657045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4657004-4657045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4649934-4650080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4644675-4644807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4641890-4642018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4640779-4640908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4628365-4628586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4625741-4625881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4612592-4612677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611531-4611654:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4610520-4610592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4605349-4605513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4603173-4603220:-1:exon

slc22a15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: slc22a15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 15 isoform X2
translation: MFLMTNSVVSPKGEIYVACQSMLIVLVGAQPEYSVNTQEVISTHEELIKHVIFEEDITSIATEWYLIRQEAYKVNLAGSLFFVGLLIGNILFGPLSDRFGRKPIFLTGLFLDVVFGFITAVAPNYEVFAVTRLLVGLVNGGMSLVAFVLTQEFVGKSYWALTGSLTNLVFAIGIAAFSVIGYYIRDWRTLAAVANCPGVLFFLLFIPIPESPRWLYSQGKTEEAGEVLQYIAQRNGNGKIFVQLKPCAGTLKTGQSAHGVMDLVRYPALRWRTAILMYVWYVCSLVYYGLTLNAGDLKGNRYLNIALYGLVEVPAFPLCLYFIDKSWSGRRKTMAAFLLFAGVACISTMFLPRHLGLDMGFLLNVTSLALCGKLAVSAAFNIVYVFTAELYPTVIRNAGLGICSMSCRVGGILAPFVPSLKSLNPSMPFIVFGIAGMSGGFLGLLLPETLNKPIAESIEDLHTPAYQKLEDKRKKGVESQDITQSRRSEA
SIO_010081: slc22a15
subclass of: SO_0000673
so part of: slc22a15
location: complement(join(4603173..4603220,4605349..4605513,4610520..4610592,4611531..4611651,4612592..4612677,4625741..4625881,4628365..4628586,4640779..4640908,4641890..4642054,4644675..4644807,4649934..4650080,4657004..4657045))
location: region:4603173-4657045:-1
so has part: feature:4657004-4657045:-1:exon
so has part: feature:4649934-4650080:-1:exon
so has part: feature:4644675-4644807:-1:exon
so has part: feature:4641890-4642054:-1:exon
so has part: feature:4640779-4640908:-1:exon
so has part: feature:4628365-4628586:-1:exon
so has part: feature:4625741-4625881:-1:exon
so has part: feature:4612592-4612677:-1:exon
so has part: feature:4611531-4611651:-1:exon
so has part: feature:4610520-4610592:-1:exon
so has part: feature:4605349-4605513:-1:exon
so has part: feature:4603173-4603220:-1:exon

XP_048464818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4657004-4657045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4649934-4650080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4644675-4644807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4641890-4642054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4640779-4640908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4628365-4628586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4625741-4625881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4612592-4612677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611531-4611651:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4610520-4610592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4605349-4605513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4603173-4603220:-1:exon

slc22a15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: slc22a15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 15 isoform X1
translation: MFLMTNSVVSPKGEIYVACQSMLIVLVGAQPEYSVNTQEVISTHEELIKHVIFEEDITSIATEWYLIRQEAYKVNLAGSLFFVGLLIGNILFGPLSDRFGRKPIFLTGLFLDVVFGFITAVAPNYEVFAVTRLLVGLVNGGMSLVAFVLTQEFVGKSYWALTGSLTNLVFAIGIAAFSVIGYYIRDWRTLAAVANCPGVLFFLLFIPIPESPRWLYSQGKTEEAGEVLQYIAQRNGNGKIFVQLKPCAGTLKTGQSAHGVMDLVRYPALRWRTAILMYVWYVCSLVYYGLTLNAGDLKGNRYLNIALYGLVEVPAFPLCLYFIDKSWSGRRKTMAAFLLFAGVACISTMFLPRHLAGLDMGFLLNVTSLALCGKLAVSAAFNIVYVFTAELYPTVIRNAGLGICSMSCRVGGILAPFVPSLKSLNPSMPFIVFGIAGMSGGFLGLLLPETLNKPIAESIEDLHTPAYQKLEDKRKKGVESQDITQSRRSEA
SIO_010081: slc22a15
subclass of: SO_0000673
so part of: slc22a15
location: complement(join(4603173..4603220,4605349..4605513,4610520..4610592,4611531..4611654,4612592..4612677,4625741..4625881,4628365..4628586,4640779..4640908,4641890..4642054,4644675..4644807,4649934..4650080,4657004..4657045))
location: region:4603173-4657045:-1
so has part: feature:4657004-4657045:-1:exon
so has part: feature:4649934-4650080:-1:exon
so has part: feature:4644675-4644807:-1:exon
so has part: feature:4641890-4642054:-1:exon
so has part: feature:4640779-4640908:-1:exon
so has part: feature:4628365-4628586:-1:exon
so has part: feature:4625741-4625881:-1:exon
so has part: feature:4612592-4612677:-1:exon
so has part: feature:4611531-4611654:-1:exon
so has part: feature:4610520-4610592:-1:exon
so has part: feature:4605349-4605513:-1:exon
so has part: feature:4603173-4603220:-1:exon

XP_048464816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4657004-4657045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4649934-4650080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4644675-4644807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4641890-4642054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4640779-4640908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4628365-4628586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4625741-4625881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4612592-4612677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611531-4611654:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4610520-4610592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4605349-4605513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4603173-4603220:-1:exon

slc22a15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: slc22a15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 15 isoform X4
translation: MLIVLVGAQPEYSVNTQEVISTHEELIKHVIFEEDITSIATEWYLIRQEAYKVNLAGSLFFVGLLIGNILFGPLSDRFGRKPIFLTGLFLDVVFGFITAVAPNYEVFAVTRLLVGLVNGGMSLVAFVLTQEFVGKSYWALTGSLTNLVFAIGIAAFSVIGYYIRDWRTLAAVANCPGVLFFLLFIPIPESPRWLYSQGKTEEAGEVLQYIAQRNGNGKIFVQLKPCAGTLKTGQSAHGVMDLVRYPALRWRTAILMYVWYVCSLVYYGLTLNAGDLKGNRYLNIALYGLVEVPAFPLCLYFIDKSWSGRRKTMAAFLLFAGVACISTMFLPRHLAGLDMGFLLNVTSLALCGKLAVSAAFNIVYVFTAELYPTVIRNAGLGICSMSCRVGGILAPFVPSLKSLNPSMPFIVFGIAGMSGGFLGLLLPETLNKPIAESIEDLHTPAYQKLEDKRKKGVESQDITQSRRSEA
SIO_010081: slc22a15
subclass of: SO_0000673
so part of: slc22a15
location: complement(join(4603173..4603220,4605349..4605513,4610520..4610592,4611531..4611654,4612592..4612677,4625741..4625881,4628365..4628586,4640779..4640908,4641890..4642054,4644675..4644807,4649934..4650059))
location: region:4603173-4650059:-1
so has part: feature:4649934-4650059:-1:exon
so has part: feature:4644675-4644807:-1:exon
so has part: feature:4641890-4642054:-1:exon
so has part: feature:4640779-4640908:-1:exon
so has part: feature:4628365-4628586:-1:exon
so has part: feature:4625741-4625881:-1:exon
so has part: feature:4612592-4612677:-1:exon
so has part: feature:4611531-4611654:-1:exon
so has part: feature:4610520-4610592:-1:exon
so has part: feature:4605349-4605513:-1:exon
so has part: feature:4603173-4603220:-1:exon

XP_048464820.1
type: Protein
SIO_000068: ncbiprotein

position:4650059:-1
position: 4650059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4649934-4650059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4644675-4644807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4641890-4642054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4640779-4640908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4628365-4628586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4625741-4625881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4612592-4612677:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4611531-4611654:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4610520-4610592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4605349-4605513:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4603173-4603220:-1:exon

reep3b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: reep3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4668757..4720371)
location: region:4668757-4720371:-1
so has part: feature:4668757-4720371:-1:exon
subclass of: SO_0000010

109938495
type: Gene
SIO_000068: ncbigene

position:4668757:-1
position: 4668757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4720371:-1
position: 4720371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4668757-4720371:-1:exon

reep3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: reep3b
product: receptor accessory protein 3b, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608840.1
SIO_010081: reep3b
subclass of: SO_0000673
so part of: reep3b
location: complement(join(4668757..4669860,4670655..4670806,4673076..4673220,4675347..4675460,4676646..4676766,4682602..4682678,4703267..4703339,4720238..4720371))
location: region:4668757-4720371:-1
so has part: feature:4720238-4720371:-1:exon
so has part: feature:4703267-4703339:-1:exon
so has part: feature:4682602-4682678:-1:exon
so has part: feature:4676646-4676766:-1:exon
so has part: feature:4675347-4675460:-1:exon
so has part: feature:4673076-4673220:-1:exon
so has part: feature:4670655-4670806:-1:exon
so has part: feature:4668757-4669860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4720238-4720371:-1:exon

position:4720238:-1
position: 4720238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4703267-4703339:-1:exon

position:4703267:-1
position: 4703267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4703339:-1
position: 4703339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4682602-4682678:-1:exon

position:4682602:-1
position: 4682602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4682678:-1
position: 4682678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4676646-4676766:-1:exon

position:4676646:-1
position: 4676646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4676766:-1
position: 4676766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4675347-4675460:-1:exon

position:4675347:-1
position: 4675347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4675460:-1
position: 4675460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4673076-4673220:-1:exon

position:4673076:-1
position: 4673076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4673220:-1
position: 4673220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4670655-4670806:-1:exon

position:4670655:-1
position: 4670655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4670806:-1
position: 4670806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4668757-4669860:-1:exon

position:4669860:-1
position: 4669860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

reep3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: reep3b
product: receptor accessory protein 3b, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608841.1
SIO_010081: reep3b
subclass of: SO_0000673
so part of: reep3b
location: complement(join(4668757..4669860,4670655..4670806,4673076..4673220,4675347..4675460,4676646..4676766,4682602..4682678,4703267..4703339,4720302..4720342))
location: region:4668757-4720342:-1
so has part: feature:4720302-4720342:-1:exon
so has part: feature:4703267-4703339:-1:exon
so has part: feature:4682602-4682678:-1:exon
so has part: feature:4676646-4676766:-1:exon
so has part: feature:4675347-4675460:-1:exon
so has part: feature:4673076-4673220:-1:exon
so has part: feature:4670655-4670806:-1:exon
so has part: feature:4668757-4669860:-1:exon

position:4720342:-1
position: 4720342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4720302-4720342:-1:exon

position:4720302:-1
position: 4720302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4703267-4703339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4682602-4682678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4676646-4676766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4675347-4675460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4673076-4673220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4670655-4670806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4668757-4669860:-1:exon

reep3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: reep3b
product: receptor accessory protein 3b, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608842.1
SIO_010081: reep3b
subclass of: SO_0000673
so part of: reep3b
location: complement(join(4668757..4669860,4670655..4670806,4673076..4673220,4675347..4675460,4676646..4676766,4682602..4682678,4703267..4703339,4711635..4711668))
location: region:4668757-4711668:-1
so has part: feature:4711635-4711668:-1:exon
so has part: feature:4703267-4703339:-1:exon
so has part: feature:4682602-4682678:-1:exon
so has part: feature:4676646-4676766:-1:exon
so has part: feature:4675347-4675460:-1:exon
so has part: feature:4673076-4673220:-1:exon
so has part: feature:4670655-4670806:-1:exon
so has part: feature:4668757-4669860:-1:exon

position:4711668:-1
position: 4711668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4711635-4711668:-1:exon

position:4711635:-1
position: 4711635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4703267-4703339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4682602-4682678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4676646-4676766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4675347-4675460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4673076-4673220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4670655-4670806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4668757-4669860:-1:exon

reep3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: reep3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 3 isoform X1
translation: MVSWIIARTVVLVFGTLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVLETFADLMVSWLPLYYELKVAFVIWLLSPYTRGASLLYRKFLHPLLSSREREIDDYISQAKDRSYDTMVKFGKQGLNFAATAAVSAAVKSQGAITERLRSLSMHDLTAIQGDEPVGHRSIDVAADTRRKVKHLKDDANRSFNFDDDLDGKAQSEEDHDAAHSDDEIAKQKYLRRSQSLKLKQRGYRKETRYGSLKLRSKKRPQCSYITTG
SIO_010081: reep3b
subclass of: SO_0000673
so part of: reep3b
location: complement(join(4669792..4669860,4670655..4670806,4673076..4673220,4675347..4675460,4676646..4676766,4682602..4682678,4703267..4703339,4720238..4720269))
location: region:4669792-4720269:-1
so has part: feature:4720238-4720269:-1:exon
so has part: feature:4703267-4703339:-1:exon
so has part: feature:4682602-4682678:-1:exon
so has part: feature:4676646-4676766:-1:exon
so has part: feature:4675347-4675460:-1:exon
so has part: feature:4673076-4673220:-1:exon
so has part: feature:4670655-4670806:-1:exon
so has part: feature:4669792-4669860:-1:exon

XP_048464797.1
type: Protein
SIO_000068: ncbiprotein

position:4669792:-1
position: 4669792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4720269:-1
position: 4720269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4720238-4720269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4703267-4703339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4682602-4682678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4676646-4676766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4675347-4675460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4673076-4673220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4670655-4670806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4669792-4669860:-1:exon

reep3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: reep3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 3 isoform X2
translation: MMYWIVFALYTVLETFADLMVSWLPLYYELKVAFVIWLLSPYTRGASLLYRKFLHPLLSSREREIDDYISQAKDRSYDTMVKFGKQGLNFAATAAVSAAVKSQGAITERLRSLSMHDLTAIQGDEPVGHRSIDVAADTRRKVKHLKDDANRSFNFDDDLDGKAQSEEDHDAAHSDDEIAKQKYLRRSQSLKLKQRGYRKETRYGSLKLRSKKRPQCSYITTG
SIO_010081: reep3b
subclass of: SO_0000673
so part of: reep3b
location: complement(join(4669792..4669860,4670655..4670806,4673076..4673220,4675347..4675460,4676646..4676766,4682602..4682669))
location: region:4669792-4682669:-1
so has part: feature:4682602-4682669:-1:exon
so has part: feature:4676646-4676766:-1:exon
so has part: feature:4675347-4675460:-1:exon
so has part: feature:4673076-4673220:-1:exon
so has part: feature:4670655-4670806:-1:exon
so has part: feature:4669792-4669860:-1:exon

XP_048464798.1
type: Protein
SIO_000068: ncbiprotein

position:4682669:-1
position: 4682669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4682602-4682669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4676646-4676766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4675347-4675460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4673076-4673220:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4670655-4670806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4669792-4669860:-1:exon

reep3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: reep3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 3 isoform X2
translation: MMYWIVFALYTVLETFADLMVSWLPLYYELKVAFVIWLLSPYTRGASLLYRKFLHPLLSSREREIDDYISQAKDRSYDTMVKFGKQGLNFAATAAVSAAVKSQGAITERLRSLSMHDLTAIQGDEPVGHRSIDVAADTRRKVKHLKDDANRSFNFDDDLDGKAQSEEDHDAAHSDDEIAKQKYLRRSQSLKLKQRGYRKETRYGSLKLRSKKRPQCSYITTG
SIO_010081: reep3b
subclass of: SO_0000673
so part of: reep3b
location: complement(join(4669792..4669860,4670655..4670806,4673076..4673220,4675347..4675460,4676646..4676766,4682602..4682669))
location: region:4669792-4682669:-1
so has part: feature:4682602-4682669:-1:exon
so has part: feature:4676646-4676766:-1:exon
so has part: feature:4675347-4675460:-1:exon
so has part: feature:4673076-4673220:-1:exon
so has part: feature:4670655-4670806:-1:exon
so has part: feature:4669792-4669860:-1:exon

XP_048464799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4682602-4682669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4676646-4676766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4675347-4675460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4673076-4673220:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4670655-4670806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4669792-4669860:-1:exon

LOC125485578
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4743748..4975402
location: region:4743748-4975402:1
so has part: feature:4743748-4975402:1:exon
subclass of: SO_0000010

125485578
type: Gene
SIO_000068: ncbigene

position:4743748:1
position: 4743748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4975402:1
position: 4975402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4743748-4975402:1:exon

LOC125485578
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125485578
product: probable JmjC domain-containing histone demethylation protein 2C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048609007.1
SIO_010081: LOC125485578
subclass of: SO_0000673
so part of: LOC125485578
location: join(4743748..4743906,4880508..4880672,4961370..4961483,4975275..4975402)
location: region:4743748-4975402:1
so has part: feature:4743748-4743906:1:exon
so has part: feature:4880508-4880672:1:exon
so has part: feature:4961370-4961483:1:exon
so has part: feature:4975275-4975402:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4743748-4743906:1:exon

position:4743906:1
position: 4743906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4880508-4880672:1:exon

position:4880508:1
position: 4880508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4880672:1
position: 4880672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4961370-4961483:1:exon

position:4961370:1
position: 4961370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4961483:1
position: 4961483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4975275-4975402:1:exon

position:4975275:1
position: 4975275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125485578
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125485578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable JmjC domain-containing histone demethylation protein 2C
translation: MAPGPRTELVGKRFVCVGDSGRELDVSRIHEWHWRAGVIRAVSYREPSNRELSVYVEFDDLEWEKREWVKVYEDFKIFLVEHQLVWAKRKNPNQTQGSKSKQIQWPALTFKSVVGKAVLHLLIAIEFFVDKQLNFIPGDSAFQLYQISILFKERRKKDCLGDGKQDGSKEGRVKQNDHTSISFVGWM
SIO_010081: LOC125485578
subclass of: SO_0000673
so part of: LOC125485578
location: join(4743748..4743906,4880508..4880672,4961370..4961483,4975275..4975400)
location: region:4743748-4975400:1
so has part: feature:4743748-4743906:1:exon
so has part: feature:4880508-4880672:1:exon
so has part: feature:4961370-4961483:1:exon
so has part: feature:4975275-4975400:1:exon

XP_048464964.1
type: Protein
SIO_000068: ncbiprotein

position:4975400:1
position: 4975400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4743748-4743906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4880508-4880672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4961370-4961483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4975275-4975400:1:exon

LOC125485579
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4766233..4767494)
location: region:4766233-4767494:-1
so has part: feature:4766233-4767494:-1:exon
subclass of: SO_0000011

125485579
type: Gene
SIO_000068: ncbigene

position:4766233:-1
position: 4766233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4767494:-1
position: 4767494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4766233-4767494:-1:exon

LOC125485579
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485579
product: uncharacterized LOC125485579
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007264290.1
SIO_010081: LOC125485579
subclass of: SO_0000673
so part of: LOC125485579
location: complement(join(4766233..4766309,4767070..4767245,4767405..4767494))
location: region:4766233-4767494:-1
so has part: feature:4767405-4767494:-1:exon
so has part: feature:4767070-4767245:-1:exon
so has part: feature:4766233-4766309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4767405-4767494:-1:exon

position:4767405:-1
position: 4767405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4767070-4767245:-1:exon

position:4767070:-1
position: 4767070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4767245:-1
position: 4767245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4766233-4766309:-1:exon

position:4766309:-1
position: 4766309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125485578
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC125485578
product: probable JmjC domain-containing histone demethylation protein 2C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_007264289.1
SIO_010081: LOC125485578
so part of: LOC125485578
location: join(4951748..4952046,4952184..4952371,4961370..4961477)
location: region:4951748-4961477:1
so has part: feature:4951748-4952046:1:exon
so has part: feature:4952184-4952371:1:exon
so has part: feature:4961370-4961477:1:exon

position:4951748:1
position: 4951748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4961477:1
position: 4961477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4951748-4952046:1:exon

position:4952046:1
position: 4952046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4952184-4952371:1:exon

position:4952184:1
position: 4952184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4952371:1
position: 4952371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4961370-4961477:1:exon

jmjd1cb
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: jmjd1cb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4996038..5064583
location: region:4996038-5064583:1
so has part: feature:4996038-5064583:1:exon
subclass of: SO_0000010

109915860
type: Gene
SIO_000068: ncbigene

position:4996038:1
position: 4996038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5064583:1
position: 5064583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4996038-5064583:1:exon

jmjd1cb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: jmjd1cb
product: jumonji domain containing 1Cb
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609154.1
SIO_010081: jmjd1cb
subclass of: SO_0000673
so part of: jmjd1cb
location: join(4996038..4996220,5000716..5002262,5003435..5003607,5004395..5006577,5019569..5019770,5022265..5022473,5023244..5023396,5025544..5025691,5037584..5037720,5038239..5038447,5049556..5049825,5050183..5050354,5050641..5050731,5052843..5052973,5053061..5053177,5056520..5056659,5057151..5057324,5060291..5060425,5063702..5064583)
location: region:4996038-5064583:1
so has part: feature:4996038-4996220:1:exon
so has part: feature:5000716-5002262:1:exon
so has part: feature:5003435-5003607:1:exon
so has part: feature:5004395-5006577:1:exon
so has part: feature:5019569-5019770:1:exon
so has part: feature:5022265-5022473:1:exon
so has part: feature:5023244-5023396:1:exon
so has part: feature:5025544-5025691:1:exon
so has part: feature:5037584-5037720:1:exon
so has part: feature:5038239-5038447:1:exon
so has part: feature:5049556-5049825:1:exon
so has part: feature:5050183-5050354:1:exon
so has part: feature:5050641-5050731:1:exon
so has part: feature:5052843-5052973:1:exon
so has part: feature:5053061-5053177:1:exon
so has part: feature:5056520-5056659:1:exon
so has part: feature:5057151-5057324:1:exon
so has part: feature:5060291-5060425:1:exon
so has part: feature:5063702-5064583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4996038-4996220:1:exon

position:4996220:1
position: 4996220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5000716-5002262:1:exon

position:5000716:1
position: 5000716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5002262:1
position: 5002262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5003435-5003607:1:exon

position:5003435:1
position: 5003435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5003607:1
position: 5003607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5004395-5006577:1:exon

position:5004395:1
position: 5004395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5006577:1
position: 5006577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5019569-5019770:1:exon

position:5019569:1
position: 5019569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5019770:1
position: 5019770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5022265-5022473:1:exon

position:5022265:1
position: 5022265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5022473:1
position: 5022473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5023244-5023396:1:exon

position:5023244:1
position: 5023244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5023396:1
position: 5023396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5025544-5025691:1:exon

position:5025544:1
position: 5025544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5025691:1
position: 5025691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5037584-5037720:1:exon

position:5037584:1
position: 5037584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5037720:1
position: 5037720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5038239-5038447:1:exon

position:5038239:1
position: 5038239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5038447:1
position: 5038447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5049556-5049825:1:exon

position:5049556:1
position: 5049556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5049825:1
position: 5049825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5050183-5050354:1:exon

position:5050183:1
position: 5050183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5050354:1
position: 5050354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5050641-5050731:1:exon

position:5050641:1
position: 5050641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5050731:1
position: 5050731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5052843-5052973:1:exon

position:5052843:1
position: 5052843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5052973:1
position: 5052973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5053061-5053177:1:exon

position:5053061:1
position: 5053061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5053177:1
position: 5053177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5056520-5056659:1:exon

position:5056520:1
position: 5056520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5056659:1
position: 5056659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5057151-5057324:1:exon

position:5057151:1
position: 5057151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5057324:1
position: 5057324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5060291-5060425:1:exon

position:5060291:1
position: 5060291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5060425:1
position: 5060425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5063702-5064583:1:exon

position:5063702:1
position: 5063702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

jmjd1cb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: jmjd1cb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable JmjC domain-containing histone demethylation protein 2C
translation: MNSQTTSGKQNQHQQRIIRSNKRKESDSSIPDEDKIKEDKCENPLKEESSKNKIKQSVNKRRKQEEVEKLVTLERLKAVSNSDTESSESENSSNKVILDSSSEKSSEGELKNKITFDNTKDEAKSQDDTGIGEQMEIDSSSPCDEKQEVKNDNGIQKPEHFDAHIDPHRAEFGQQQSIKSQEISQGCIVKVKTTSESLSLESLPDTTQKPSVQNSVSDISNRTLPDNLLNKTANIHSHGLTSRNLEMNFSTPVHLIVNKHASDIQKSEAELHLNNNIINEDKSQAIEFLTVMEANNRSEKEKSASSSGQEPTAPNKNNKPNKTNTSPDALKPKITYPCSPAACITKPTSRCKNDSRSSLQHLGSRTVMETTKSPLIVDKNERFTVYRDPALVGPDTGAKPLSPYLHPHLHPLHTSSHSSSLTTNSSHPALRAASHHVSGSPRTSVSSSAHILSSGSPHSVHSTHNLPTVLPGVPPGPLVCGHLDSVHVRNLNPLTLAHHQQFLQQQSSQLLGQTHPAAYNQLGLYPIIWQYPNGTHLSPGLSMTSSKWVHPENSLSAEASLRRNASSPWLPQHTSVSSADSLGLLSHNPVRPASAEPHRPLKLASHSSPPPSKTTVAHTKEEIDKKAVVNSKHSVTAAQMKLEFNHDRLAHGRESQLARGFTSTAFCQSKEKRSTQEPSDSQNKYNEERRRILQESIEVARFASTIKTNEVAKDSYSRIPSLPTDGPKPQSIKQDGETEHCARELYTSKNSLAHSMPQSNYFTTLSNSVVNEPPRLYLSKDIIHPYAEKTNSSTPILSSNKTLSKPPPLIKHQPESEGLVGKATEQLTQQVTSQPQTANNNNHGRTREQLTISQSNPLKSMPSLHRAPVYHPPSHHVIERKEGNYRNLSPPTLTPVQPVNAAKISELQKPPTLLPEPRVDGKICIHNPVVSSLDVWKSGVGNLGKPVCHLEKSNNKVAPASVIVRSSSIPKQENKGDSQTNSQNSLRGSVLMPSNPIEHLNSSKVKDVWRINIPGVNLESTSAEYEKNFKVLLSDNGTKSVVASNSLCNSMTNPAAPATTVEILSSSETKITYCSSYKTITNSVEGQVIPKTSTHFGTQTQECKVNTTSAAVFSTAAARTGNTTQNNTGASSTTDYYQLKKHKAALAMAHSASTTANNNESASLKCVKSASSLSPNNTGKIDVSYKTSFVTNGQIAQSSQPGYHTKLKKAWLTRHSEEDKSTNKVENTENAGKDAKKLVIVNSSASISNDVDKTGQSEEEKNEQEGRKTRRGTKRMYESGSESDASDESENKSELRVKRQPKPTYKKRQNDLQKRKADTEREEEEVKPNGTLYRNTKEKEKNKIKLQSDGLPRSVLKDWRKVKKLKQTGEPFLQDGSCSEIAPNLQKCRECRMVRYRKNEEFSQSAVFCRFYYFRRLAFSKNAVLRIDGFSTPDQCDDEAINLWLPSDSMDLDLESSKYILRNIGDTFCQIETSERTAMSWLKLDAKIAWKRAVKGVQEMCDACEATLFNIHWVCQKCGFVVCLDCYEARGRRGSKANKELYVWLKCVKGQVHDTKNLMPTQIIPSTGKILQRCILGLFCSKLIRVETFSFQLSDLDRRSSSRSHLLQTCLPWISLMSVNTYILQLLCITIKTKELPVSKAVKIKLSQIDKTEDCKTTTVCLSNEHGSTLRDLLTSTAGKLQLGSTDAGIAFAPVFSAGTPSGRGARSMPNLLDDIIASVVENKIPASKSVKLSGKEETKQEAKNFNTETISKSHPEIPHSWLCDGVLLWLQDPRNPSNWKIFRECWRRDQPVLVSGVHKNLNSNIWKPESFCEEFGDQKVDLVNCKDGSIISSTRIQDFWDGFEDLTKRIKSKNGESMLLKMKDWPSGDDFRTMMPSRFDDVMKNLPLPEYCDPEGNLNLASRIPDFFVRPDLGPKLYGAYGQSTIKEYGTTNLHLDIADVVNVLVYVGVPKGNGNNHKSAISKKIEEDEIDETTKKRLKDGNETPGALWHVFSAKDTH…
SIO_010081: jmjd1cb
subclass of: SO_0000673
so part of: jmjd1cb
location: join(4996079..4996220,5000716..5002262,5003435..5003607,5004395..5006577,5019569..5019770,5022265..5022473,5023244..5023396,5025544..5025691,5037584..5037720,5038239..5038447,5049556..5049825,5050183..5050354,5050641..5050731,5052843..5052973,5053061..5053177,5056520..5056659,5057151..5057324,5060291..5060425,5063702..5063794)
location: region:4996079-5063794:1
so has part: feature:4996079-4996220:1:exon
so has part: feature:5000716-5002262:1:exon
so has part: feature:5003435-5003607:1:exon
so has part: feature:5004395-5006577:1:exon
so has part: feature:5019569-5019770:1:exon
so has part: feature:5022265-5022473:1:exon
so has part: feature:5023244-5023396:1:exon
so has part: feature:5025544-5025691:1:exon
so has part: feature:5037584-5037720:1:exon
so has part: feature:5038239-5038447:1:exon
so has part: feature:5049556-5049825:1:exon
so has part: feature:5050183-5050354:1:exon
so has part: feature:5050641-5050731:1:exon
so has part: feature:5052843-5052973:1:exon
so has part: feature:5053061-5053177:1:exon
so has part: feature:5056520-5056659:1:exon
so has part: feature:5057151-5057324:1:exon
so has part: feature:5060291-5060425:1:exon
so has part: feature:5063702-5063794:1:exon

XP_048465111.1
type: Protein
SIO_000068: ncbiprotein

position:4996079:1
position: 4996079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5063794:1
position: 5063794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4996079-4996220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5000716-5002262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5003435-5003607:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5004395-5006577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5019569-5019770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5022265-5022473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5023244-5023396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5025544-5025691:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5037584-5037720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5038239-5038447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5049556-5049825:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5050183-5050354:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5050641-5050731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5052843-5052973:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5053061-5053177:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5056520-5056659:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5057151-5057324:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5060291-5060425:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5063702-5063794:1:exon

nrbf2b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: nrbf2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5107460..5120559
location: region:5107460-5120559:1
so has part: feature:5107460-5120559:1:exon

109915861
type: Gene
SIO_000068: ncbigene

position:5107460:1
position: 5107460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5120559:1
position: 5120559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5107460-5120559:1:exon

nrbf2b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: nrbf2b
product: nuclear receptor binding factor 2b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_007264314.1
SIO_010081: nrbf2b
so part of: nrbf2b
location: join(5107460..5111160,5111304..5111388,5120500..5120559)
location: region:5107460-5120559:1
so has part: feature:5107460-5111160:1:exon
so has part: feature:5111304-5111388:1:exon
so has part: feature:5120500-5120559:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5107460-5111160:1:exon

position:5111160:1
position: 5111160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5111304-5111388:1:exon

position:5111304:1
position: 5111304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5111388:1
position: 5111388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5120500-5120559:1:exon

position:5120500:1
position: 5120500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125485556
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5121271..5158005
location: region:5121271-5158005:1
so has part: feature:5121271-5158005:1:exon
subclass of: SO_0000011

125485556
type: Gene
SIO_000068: ncbigene

position:5121271:1
position: 5121271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5158005:1
position: 5158005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5121271-5158005:1:exon

LOC125485556
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485556
product: uncharacterized LOC125485556, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007264266.1
SIO_010081: LOC125485556
subclass of: SO_0000673
so part of: LOC125485556
location: join(5121271..5121749,5138852..5138916,5140111..5140216,5155882..5158005)
location: region:5121271-5158005:1
so has part: feature:5121271-5121749:1:exon
so has part: feature:5138852-5138916:1:exon
so has part: feature:5140111-5140216:1:exon
so has part: feature:5155882-5158005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5121271-5121749:1:exon

position:5121749:1
position: 5121749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5138852-5138916:1:exon

position:5138852:1
position: 5138852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5138916:1
position: 5138916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5140111-5140216:1:exon

position:5140111:1
position: 5140111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5140216:1
position: 5140216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5155882-5158005:1:exon

position:5155882:1
position: 5155882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125485556
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485556
product: uncharacterized LOC125485556, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007264267.1
SIO_010081: LOC125485556
subclass of: SO_0000673
so part of: LOC125485556
location: join(5121277..5122478,5127833..5128106,5138852..5138916,5140111..5140216,5155882..5158005)
location: region:5121277-5158005:1
so has part: feature:5121277-5122478:1:exon
so has part: feature:5127833-5128106:1:exon
so has part: feature:5138852-5138916:1:exon
so has part: feature:5140111-5140216:1:exon
so has part: feature:5155882-5158005:1:exon

position:5121277:1
position: 5121277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5121277-5122478:1:exon

position:5122478:1
position: 5122478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5127833-5128106:1:exon

position:5127833:1
position: 5127833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5128106:1
position: 5128106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5138852-5138916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5140111-5140216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5155882-5158005:1:exon

LOC125485556
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485556
product: uncharacterized LOC125485556, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007264268.1
SIO_010081: LOC125485556
subclass of: SO_0000673
so part of: LOC125485556
location: join(5121277..5122478,5138852..5138916,5140111..5140216,5155882..5158005)
location: region:5121277-5158005:1
so has part: feature:5121277-5122478:1:exon
so has part: feature:5138852-5138916:1:exon
so has part: feature:5140111-5140216:1:exon
so has part: feature:5155882-5158005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5121277-5122478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5138852-5138916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5140111-5140216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5155882-5158005:1:exon

egr2b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: egr2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5438207..5441531
location: region:5438207-5441531:1
so has part: feature:5438207-5441531:1:exon
subclass of: SO_0000010

109918799
type: Gene
SIO_000068: ncbigene

position:5438207:1
position: 5438207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5441531:1
position: 5441531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5438207-5441531:1:exon

egr2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: egr2b
product: early growth response 2b
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020518742.2
SIO_010081: egr2b
subclass of: SO_0000673
so part of: egr2b
location: join(5438207..5438639,5439209..5441531)
location: region:5438207-5441531:1
so has part: feature:5438207-5438639:1:exon
so has part: feature:5439209-5441531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5438207-5438639:1:exon

position:5438639:1
position: 5438639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5439209-5441531:1:exon

position:5439209:1
position: 5439209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

egr2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: egr2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: early growth response protein 2b
translation: MTAKAVEKIPLSLGGLFHQIPDNMYSADDLSSLPASVTIFPNQELAPYEQIPSDMINVDMSSDKRALELPYPNNYHPASGPRGQSFTYMGKFSIDSQCTGANWSPDGIINIVSAGIFGVPPSTSSSASSSSSSSSSSASPNPLSSTLSCTMAQNASDMEHMYSPPPPYSCGEIYQEPAPFFSTSSCYPPPPPPPSYPSSKPVVENPLFPILPEYSSIFQPQHSHRELNPGVERKPFSCPGDTVRMAPALTPLSTIRNFTLGNPTAEGPRLPSAYGGQNLPLRPIRLRKYPNRPSKTPVHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFSCDFCGRKFARSDERKRHTKIHLRQKEKRLAGDKPPGPAVGSTVCSGGSPLAVCPPRTV
SIO_010081: egr2b
subclass of: SO_0000673
so part of: egr2b
location: join(5438480..5438639,5439209..5440311)
location: region:5438480-5440311:1
so has part: feature:5438480-5438639:1:exon
so has part: feature:5439209-5440311:1:exon

XP_020374331.2
type: Protein
SIO_000068: ncbiprotein

position:5438480:1
position: 5438480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5440311:1
position: 5440311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5438480-5438639:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5439209-5440311:1:exon

adoa
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: adoa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5457771..5460973)
location: region:5457771-5460973:-1
so has part: feature:5457771-5460973:-1:exon
subclass of: SO_0000010

109918800
type: Gene
SIO_000068: ncbigene

position:5457771:-1
position: 5457771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5460973:-1
position: 5460973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5457771-5460973:-1:exon

adoa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: adoa
product: 2-aminoethanethiol (cysteamine) dioxygenase a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020518743.2
SIO_010081: adoa
subclass of: SO_0000673
so part of: adoa
location: complement(5457771..5460973)
location: region:5457771-5460973:-1
so has part: feature:5457771-5460973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5457771-5460973:-1:exon

adoa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: adoa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-aminoethanethiol (cysteamine) dioxygenase a
translation: MPRDRMATSMIQKIARQARTTFKLLPLAEAGPGPGAFQDNLSQLSSLLEKVKAEDLNLAPRRNQGPRQAGPPVTYMHICESEHFSMGVFLLQAGACIPLHDHPGMHGLLKVLYGSVTVECFDKDEGNQAAAGVQFNPPLLQGQRSNLRRSLRASSGLLDQASGPCLLTPLLGNMHRIEAPNGPAAFLDILAPPYDPEAGRDCHYFKVLQPVPGKASSPAPPEQEAVWLLEVPQPADFWCGGEPYPGPQVAPDRETSPNK
SIO_010081: adoa
subclass of: SO_0000673
so part of: adoa
location: complement(5460082..5460861)
location: region:5460082-5460861:-1
so has part: feature:5460082-5460861:-1:exon

XP_020374332.2
type: Protein
SIO_000068: ncbiprotein

position:5460082:-1
position: 5460082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5460861:-1
position: 5460861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5460082-5460861:-1:exon

LOC109919690
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109919690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5722241..5756556
location: region:5722241-5756556:1
so has part: feature:5722241-5756556:1:exon
subclass of: SO_0000010

109919690
type: Gene
SIO_000068: ncbigene

position:5722241:1
position: 5722241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5756556:1
position: 5756556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5722241-5756556:1:exon

LOC109919690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919690
product: rhotekin-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048609235.1
SIO_010081: LOC109919690
subclass of: SO_0000673
so part of: LOC109919690
location: join(5722241..5722434,5723726..5723784,5725208..5725261,5725352..5725469,5728799..5728999,5734262..5734356,5736272..5736378,5740655..5740786,5742577..5742742,5746650..5746757,5751190..5756556)
location: region:5722241-5756556:1
so has part: feature:5722241-5722434:1:exon
so has part: feature:5723726-5723784:1:exon
so has part: feature:5725208-5725261:1:exon
so has part: feature:5725352-5725469:1:exon
so has part: feature:5728799-5728999:1:exon
so has part: feature:5734262-5734356:1:exon
so has part: feature:5736272-5736378:1:exon
so has part: feature:5740655-5740786:1:exon
so has part: feature:5742577-5742742:1:exon
so has part: feature:5746650-5746757:1:exon
so has part: feature:5751190-5756556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5722241-5722434:1:exon

position:5722434:1
position: 5722434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5723726-5723784:1:exon

position:5723726:1
position: 5723726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5723784:1
position: 5723784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5725208-5725261:1:exon

position:5725208:1
position: 5725208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5725261:1
position: 5725261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5725352-5725469:1:exon

position:5725352:1
position: 5725352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5725469:1
position: 5725469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5728799-5728999:1:exon

position:5728799:1
position: 5728799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5728999:1
position: 5728999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5734262-5734356:1:exon

position:5734262:1
position: 5734262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5734356:1
position: 5734356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5736272-5736378:1:exon

position:5736272:1
position: 5736272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5736378:1
position: 5736378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5740655-5740786:1:exon

position:5740655:1
position: 5740655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5740786:1
position: 5740786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5742577-5742742:1:exon

position:5742577:1
position: 5742577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5742742:1
position: 5742742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5746650-5746757:1:exon

position:5746650:1
position: 5746650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5746757:1
position: 5746757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5751190-5756556:1:exon

position:5751190:1
position: 5751190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109919690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109919690
product: rhotekin-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048609236.1
SIO_010081: LOC109919690
subclass of: SO_0000673
so part of: LOC109919690
location: join(5722244..5722434,5723726..5723784,5725208..5725261,5725352..5725473)
location: region:5722244-5725473:1
so has part: feature:5722244-5722434:1:exon
so has part: feature:5723726-5723784:1:exon
so has part: feature:5725208-5725261:1:exon
so has part: feature:5725352-5725473:1:exon

position:5722244:1
position: 5722244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5725473:1
position: 5725473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5722244-5722434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5723726-5723784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5725208-5725261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5725352-5725473:1:exon

LOC109919690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhotekin-2-like isoform X1
translation: MREGICKLLVASTQRDQVLHAAKNLLTCNARIRSYVAEVQRCTEEQTLPKVIGRLSDTEIKQHSACSGKVAISDIRIPLMWKDSDHFNNRGKSPRFAVFCLVKIHTQIFDTEMVIVDKTLTDICFENLMIFDDMKPDFELKLEVYSSCMEEGSSIMNTPKRLARKLSTSLSRSTGKRLTSALENGDLNSLLLANPVAVGTKYFLLAEATLKLDDVEDSFRTHSLTILGNEESSFWLPLYGNLCCRLVAQPACMTMDVMTGYLNLEQMVGGQSNWTRLYCVLRSGYLTVYYSPEEIEARVDPKLKIAIDKETRIRAMGKGSRIRTHCFSLINPYSGETASRVFAADCKDDLQQWMEAFWQHIGDISQWKHCCKELMKIEIMSPRKPPLFLTKQATSVYDDMNVQSPQKDESLVDIIRNRIQETDGEFLFTKQELSEPPRWAALFDGSHDIVVQRNVLTPDGSNKLALISPGKAKKRPAPPPPVGKQPFHLGDLHPERCQKENTWRVPCLSDVGSELPSSLDDTTVLAPPRQRSANQAEDVAQVVTKLDQPDRPVPPHRQKRSIKAKLDPRSWILSQM
SIO_010081: LOC109919690
subclass of: SO_0000673
so part of: LOC109919690
location: join(5722274..5722434,5723726..5723784,5725208..5725261,5725352..5725469,5728799..5728999,5734262..5734356,5736272..5736378,5740655..5740786,5742577..5742742,5746650..5746757,5751190..5751719)
location: region:5722274-5751719:1
so has part: feature:5722274-5722434:1:exon
so has part: feature:5723726-5723784:1:exon
so has part: feature:5725208-5725261:1:exon
so has part: feature:5725352-5725469:1:exon
so has part: feature:5728799-5728999:1:exon
so has part: feature:5734262-5734356:1:exon
so has part: feature:5736272-5736378:1:exon
so has part: feature:5740655-5740786:1:exon
so has part: feature:5742577-5742742:1:exon
so has part: feature:5746650-5746757:1:exon
so has part: feature:5751190-5751719:1:exon

XP_048465192.1
type: Protein
SIO_000068: ncbiprotein

position:5722274:1
position: 5722274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5751719:1
position: 5751719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5722274-5722434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5723726-5723784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5725208-5725261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5725352-5725469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5728799-5728999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5734262-5734356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5736272-5736378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5740655-5740786:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5742577-5742742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5746650-5746757:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5751190-5751719:1:exon

LOC109919690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109919690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhotekin-2-like isoform X2
translation: MREGICKLLVASTQRDQVLHAAKNLLTCNARIRSYVAEVQRCTEEQTLPKVIGRLSDTEIKQHSACSGKVAISDIRIPLMWKDSDHFNNRGKSPRFAVFCLVKIHTQIFDTEMVIVDKTLTDICFENLMIL
SIO_010081: LOC109919690
subclass of: SO_0000673
so part of: LOC109919690
location: join(5722274..5722434,5723726..5723784,5725208..5725261,5725352..5725473)
location: region:5722274-5725473:1
so has part: feature:5722274-5722434:1:exon
so has part: feature:5723726-5723784:1:exon
so has part: feature:5725208-5725261:1:exon
so has part: feature:5725352-5725473:1:exon

XP_048465193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5722274-5722434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5723726-5723784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5725208-5725261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5725352-5725473:1:exon

LOC109919690
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC109919690
product: rhotekin-2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007264319.1
SIO_010081: LOC109919690
so part of: LOC109919690
location: join(5750313..5751085,5751190..5751295)
location: region:5750313-5751295:1
so has part: feature:5750313-5751085:1:exon
so has part: feature:5751190-5751295:1:exon

position:5750313:1
position: 5750313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5751295:1
position: 5751295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5750313-5751085:1:exon

position:5751085:1
position: 5751085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5751190-5751295:1:exon

arid5b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: arid5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5768324..5893594)
location: region:5768324-5893594:-1
so has part: feature:5768324-5893594:-1:exon
subclass of: SO_0000010

109919691
type: Gene
SIO_000068: ncbigene

position:5768324:-1
position: 5768324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5893594:-1
position: 5893594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5768324-5893594:-1:exon

arid5b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: arid5b
product: AT-rich interaction domain 5B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608865.1
SIO_010081: arid5b
subclass of: SO_0000673
so part of: arid5b
location: complement(join(5768324..5772634,5783961..5784159,5800551..5800648,5801850..5801902,5812246..5812450,5813560..5813678,5854263..5854520,5882974..5883208,5892648..5892902,5893203..5893594))
location: region:5768324-5893594:-1
so has part: feature:5893203-5893594:-1:exon
so has part: feature:5892648-5892902:-1:exon
so has part: feature:5882974-5883208:-1:exon
so has part: feature:5854263-5854520:-1:exon
so has part: feature:5813560-5813678:-1:exon
so has part: feature:5812246-5812450:-1:exon
so has part: feature:5801850-5801902:-1:exon
so has part: feature:5800551-5800648:-1:exon
so has part: feature:5783961-5784159:-1:exon
so has part: feature:5768324-5772634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5893203-5893594:-1:exon

position:5893203:-1
position: 5893203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5892648-5892902:-1:exon

position:5892648:-1
position: 5892648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5892902:-1
position: 5892902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5882974-5883208:-1:exon

position:5882974:-1
position: 5882974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5883208:-1
position: 5883208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5854263-5854520:-1:exon

position:5854263:-1
position: 5854263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5854520:-1
position: 5854520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5813560-5813678:-1:exon

position:5813560:-1
position: 5813560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5813678:-1
position: 5813678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5812246-5812450:-1:exon

position:5812246:-1
position: 5812246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5812450:-1
position: 5812450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5801850-5801902:-1:exon

position:5801850:-1
position: 5801850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5801902:-1
position: 5801902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5800551-5800648:-1:exon

position:5800551:-1
position: 5800551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5800648:-1
position: 5800648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5783961-5784159:-1:exon

position:5783961:-1
position: 5783961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5784159:-1
position: 5784159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5768324-5772634:-1:exon

position:5772634:-1
position: 5772634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

arid5b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: arid5b
product: AT-rich interaction domain 5B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608866.1
SIO_010081: arid5b
subclass of: SO_0000673
so part of: arid5b
location: complement(join(5768324..5772634,5783961..5784159,5800551..5800648,5801850..5801902,5812246..5812450,5813560..5813678,5854263..5854520,5867432..5867641))
location: region:5768324-5867641:-1
so has part: feature:5867432-5867641:-1:exon
so has part: feature:5854263-5854520:-1:exon
so has part: feature:5813560-5813678:-1:exon
so has part: feature:5812246-5812450:-1:exon
so has part: feature:5801850-5801902:-1:exon
so has part: feature:5800551-5800648:-1:exon
so has part: feature:5783961-5784159:-1:exon
so has part: feature:5768324-5772634:-1:exon

position:5867641:-1
position: 5867641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5867432-5867641:-1:exon

position:5867432:-1
position: 5867432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5854263-5854520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5813560-5813678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5812246-5812450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5801850-5801902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5800551-5800648:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5783961-5784159:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5768324-5772634:-1:exon

arid5b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: arid5b
product: AT-rich interaction domain 5B, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608867.1
SIO_010081: arid5b
subclass of: SO_0000673
so part of: arid5b
location: complement(join(5768324..5772634,5783961..5784159,5800551..5800648,5801850..5801902,5812246..5812450,5813560..5813678,5854263..5854520,5866974..5867019))
location: region:5768324-5867019:-1
so has part: feature:5866974-5867019:-1:exon
so has part: feature:5854263-5854520:-1:exon
so has part: feature:5813560-5813678:-1:exon
so has part: feature:5812246-5812450:-1:exon
so has part: feature:5801850-5801902:-1:exon
so has part: feature:5800551-5800648:-1:exon
so has part: feature:5783961-5784159:-1:exon
so has part: feature:5768324-5772634:-1:exon

position:5867019:-1
position: 5867019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5866974-5867019:-1:exon

position:5866974:-1
position: 5866974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5854263-5854520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5813560-5813678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5812246-5812450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5801850-5801902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5800551-5800648:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5783961-5784159:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5768324-5772634:-1:exon

arid5b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: arid5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 5B isoform X1
translation: MEPDSVKWVGSPCGLHGAYIFYKAFKFSLEGRPRILSLGDFFFVRCKPGAPICIAELQLLWEERNNKQLLSSSKLYFLPEDTPKGRSIGHGEDEVVAVSEKVVVKLDDLMKWACSDFGTWTRGLGAVSLKPSTRKELGVNGQKEALNQYRHCTLNSGLNFKDVLKEKADLDADDADDDHSGDVDDTKIIVLSYPQYCRYRTMLKRIQNRSSSWLVNEFVMALGGIAILNGSTRILYCRDTFDHPTLIENESVCDEFAPNLKGRPRKKKHPSQKRDTQAVNGQRDSNEDSDGKASAKAKCEPKATMVKPKNNSSNCKNLSADEKSKAAADEECRAEEQTFLVTLYKYMKERNTPIERIPYLGFKQINLWTMFQAAQNLGGYEAITARRQWKQIYDELGGNPGSTSAATCTRRHYERLILPYERYIKGEEDKPLPPIKPRKQESSPPESESKVRAAVAKRKTEPNRKVKRDRDIIQKVKECSEAIAATEGSREMDKWRADMALSRDGVVTQTETGEKEQDRCDISEGSVGKGTQAKDKVSKANSEQSNGKEAELLSLHQGLTAHSTDIMVQSQAECKATSASCRDHESPQQPMDRLANDLQEKLTSAVAVTEKEAEKGCLSDQGSNAVSPGAANSSVHSDHSPKDEVENWPGGLRPESGQRLPQGQAGKGNPNLSPGPLKEKEELLVTTKTEACPSYLPLVYSRGHPGIMSPLAKKKFLSQVSGSLPNNYPIGAPPPLLSSKKCGEDGEEMVTAESNFLQGSTPEQLAINRPSVIQHAHSFQRRNTDERGEALKHGGLNKLSDSEAAYLSKHHLNCSESFKCRASYPFTSDPVDNENKGSEKKGCQPSQVSSFLADFYSSPHLHNLYRHTEHHLINDRTSKYLSTIMKDKSSSLMQNKNQDAVYLRHLSTLHRSEKKCAVKHPTEEQPTDLSLPKLKKTLPKSSSNSAVHLPSPLDIKSTTASTQPAHTDCNPKACRVPPMPIPTTTKSGEAALTPSTKLEEGVRPAISSKGGSQIIGSSKPIKRNREGTDNGSNQSPEKKLRAVSPMPLAKELALKEKPADLEGESSKNQSSGIILEGHKFPLPTPIFPGVYPGAFVSQVQDMCDGLGSAFPVDYAHPLQYLKNQAVLSPLMQPLAIHSFMIPAMQRQILASTGASPQLYRHLSAAAAPVAASYGDLLHHSLYPLASLNPQVAYSTSPISSLHPSTKL
SIO_010081: arid5b
subclass of: SO_0000673
so part of: arid5b
location: complement(join(5770454..5772634,5783961..5784159,5800551..5800648,5801850..5801902,5812246..5812450,5813560..5813678,5854263..5854520,5882974..5883208,5892648..5892902,5893203..5893223))
location: region:5770454-5893223:-1
so has part: feature:5893203-5893223:-1:exon
so has part: feature:5892648-5892902:-1:exon
so has part: feature:5882974-5883208:-1:exon
so has part: feature:5854263-5854520:-1:exon
so has part: feature:5813560-5813678:-1:exon
so has part: feature:5812246-5812450:-1:exon
so has part: feature:5801850-5801902:-1:exon
so has part: feature:5800551-5800648:-1:exon
so has part: feature:5783961-5784159:-1:exon
so has part: feature:5770454-5772634:-1:exon

XP_048464822.1
type: Protein
SIO_000068: ncbiprotein

position:5770454:-1
position: 5770454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5893223:-1
position: 5893223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5893203-5893223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5892648-5892902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5882974-5883208:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5854263-5854520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5813560-5813678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5812246-5812450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5801850-5801902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5800551-5800648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5783961-5784159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5770454-5772634:-1:exon

arid5b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: arid5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 5B isoform X2
translation: MLKRIQNRSSSWLVNEFVMALGGIAILNGSTRILYCRDTFDHPTLIENESVCDEFAPNLKGRPRKKKHPSQKRDTQAVNGQRDSNEDSDGKASAKAKCEPKATMVKPKNNSSNCKNLSADEKSKAAADEECRAEEQTFLVTLYKYMKERNTPIERIPYLGFKQINLWTMFQAAQNLGGYEAITARRQWKQIYDELGGNPGSTSAATCTRRHYERLILPYERYIKGEEDKPLPPIKPRKQESSPPESESKVRAAVAKRKTEPNRKVKRDRDIIQKVKECSEAIAATEGSREMDKWRADMALSRDGVVTQTETGEKEQDRCDISEGSVGKGTQAKDKVSKANSEQSNGKEAELLSLHQGLTAHSTDIMVQSQAECKATSASCRDHESPQQPMDRLANDLQEKLTSAVAVTEKEAEKGCLSDQGSNAVSPGAANSSVHSDHSPKDEVENWPGGLRPESGQRLPQGQAGKGNPNLSPGPLKEKEELLVTTKTEACPSYLPLVYSRGHPGIMSPLAKKKFLSQVSGSLPNNYPIGAPPPLLSSKKCGEDGEEMVTAESNFLQGSTPEQLAINRPSVIQHAHSFQRRNTDERGEALKHGGLNKLSDSEAAYLSKHHLNCSESFKCRASYPFTSDPVDNENKGSEKKGCQPSQVSSFLADFYSSPHLHNLYRHTEHHLINDRTSKYLSTIMKDKSSSLMQNKNQDAVYLRHLSTLHRSEKKCAVKHPTEEQPTDLSLPKLKKTLPKSSSNSAVHLPSPLDIKSTTASTQPAHTDCNPKACRVPPMPIPTTTKSGEAALTPSTKLEEGVRPAISSKGGSQIIGSSKPIKRNREGTDNGSNQSPEKKLRAVSPMPLAKELALKEKPADLEGESSKNQSSGIILEGHKFPLPTPIFPGVYPGAFVSQVQDMCDGLGSAFPVDYAHPLQYLKNQAVLSPLMQPLAIHSFMIPAMQRQILASTGASPQLYRHLSAAAAPVAASYGDLLHHSLYPLASLNPQVAYSTSPISSLHPSTKL
SIO_010081: arid5b
subclass of: SO_0000673
so part of: arid5b
location: complement(join(5770454..5772634,5783961..5784159,5800551..5800648,5801850..5801902,5812246..5812450,5813560..5813678,5854263..5854428))
location: region:5770454-5854428:-1
so has part: feature:5854263-5854428:-1:exon
so has part: feature:5813560-5813678:-1:exon
so has part: feature:5812246-5812450:-1:exon
so has part: feature:5801850-5801902:-1:exon
so has part: feature:5800551-5800648:-1:exon
so has part: feature:5783961-5784159:-1:exon
so has part: feature:5770454-5772634:-1:exon

XP_048464823.1
type: Protein
SIO_000068: ncbiprotein

position:5854428:-1
position: 5854428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5854263-5854428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5813560-5813678:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5812246-5812450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5801850-5801902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5800551-5800648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5783961-5784159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5770454-5772634:-1:exon

arid5b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: arid5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 5B isoform X2
translation: MLKRIQNRSSSWLVNEFVMALGGIAILNGSTRILYCRDTFDHPTLIENESVCDEFAPNLKGRPRKKKHPSQKRDTQAVNGQRDSNEDSDGKASAKAKCEPKATMVKPKNNSSNCKNLSADEKSKAAADEECRAEEQTFLVTLYKYMKERNTPIERIPYLGFKQINLWTMFQAAQNLGGYEAITARRQWKQIYDELGGNPGSTSAATCTRRHYERLILPYERYIKGEEDKPLPPIKPRKQESSPPESESKVRAAVAKRKTEPNRKVKRDRDIIQKVKECSEAIAATEGSREMDKWRADMALSRDGVVTQTETGEKEQDRCDISEGSVGKGTQAKDKVSKANSEQSNGKEAELLSLHQGLTAHSTDIMVQSQAECKATSASCRDHESPQQPMDRLANDLQEKLTSAVAVTEKEAEKGCLSDQGSNAVSPGAANSSVHSDHSPKDEVENWPGGLRPESGQRLPQGQAGKGNPNLSPGPLKEKEELLVTTKTEACPSYLPLVYSRGHPGIMSPLAKKKFLSQVSGSLPNNYPIGAPPPLLSSKKCGEDGEEMVTAESNFLQGSTPEQLAINRPSVIQHAHSFQRRNTDERGEALKHGGLNKLSDSEAAYLSKHHLNCSESFKCRASYPFTSDPVDNENKGSEKKGCQPSQVSSFLADFYSSPHLHNLYRHTEHHLINDRTSKYLSTIMKDKSSSLMQNKNQDAVYLRHLSTLHRSEKKCAVKHPTEEQPTDLSLPKLKKTLPKSSSNSAVHLPSPLDIKSTTASTQPAHTDCNPKACRVPPMPIPTTTKSGEAALTPSTKLEEGVRPAISSKGGSQIIGSSKPIKRNREGTDNGSNQSPEKKLRAVSPMPLAKELALKEKPADLEGESSKNQSSGIILEGHKFPLPTPIFPGVYPGAFVSQVQDMCDGLGSAFPVDYAHPLQYLKNQAVLSPLMQPLAIHSFMIPAMQRQILASTGASPQLYRHLSAAAAPVAASYGDLLHHSLYPLASLNPQVAYSTSPISSLHPSTKL
SIO_010081: arid5b
subclass of: SO_0000673
so part of: arid5b
location: complement(join(5770454..5772634,5783961..5784159,5800551..5800648,5801850..5801902,5812246..5812450,5813560..5813678,5854263..5854428))
location: region:5770454-5854428:-1
so has part: feature:5854263-5854428:-1:exon
so has part: feature:5813560-5813678:-1:exon
so has part: feature:5812246-5812450:-1:exon
so has part: feature:5801850-5801902:-1:exon
so has part: feature:5800551-5800648:-1:exon
so has part: feature:5783961-5784159:-1:exon
so has part: feature:5770454-5772634:-1:exon

XP_048464824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5854263-5854428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5813560-5813678:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5812246-5812450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5801850-5801902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5800551-5800648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5783961-5784159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5770454-5772634:-1:exon

cabcoco1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cabcoco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5936566..6073741)
location: region:5936566-6073741:-1
so has part: feature:5936566-6073741:-1:exon
subclass of: SO_0000010

109921209
type: Gene
SIO_000068: ncbigene

position:5936566:-1
position: 5936566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6073741:-1
position: 6073741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5936566-6073741:-1:exon

cabcoco1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cabcoco1
product: ciliary associated calcium binding coiled-coil 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609117.1
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936566..5936917,5957256..5957387,5957484..5957663,5966273..5966345,6003209..6003353,6005742..6005789,6006122..6006288,6015121..6015227,6073566..6073741))
location: region:5936566-6073741:-1
so has part: feature:6073566-6073741:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006288:-1:exon
so has part: feature:6005742-6005789:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957663:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936566-5936917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073741:-1:exon

position:6073566:-1
position: 6073566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

position:6015121:-1
position: 6015121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6015227:-1
position: 6015227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006288:-1:exon

position:6006122:-1
position: 6006122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6006288:-1
position: 6006288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6005742-6005789:-1:exon

position:6005742:-1
position: 6005742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6005789:-1
position: 6005789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6003209-6003353:-1:exon

position:6003209:-1
position: 6003209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6003353:-1
position: 6003353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5966273-5966345:-1:exon

position:5966273:-1
position: 5966273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5966345:-1
position: 5966345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5957484-5957663:-1:exon

position:5957484:-1
position: 5957484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5957663:-1
position: 5957663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5957256-5957387:-1:exon

position:5957256:-1
position: 5957256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5957387:-1
position: 5957387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5936566-5936917:-1:exon

position:5936917:-1
position: 5936917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cabcoco1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cabcoco1
product: ciliary associated calcium binding coiled-coil 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609121.1
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936566..5936917,5957256..5957387,5957484..5957603,5966273..5966345,6003209..6003353,6006122..6006291,6015121..6015227,6073566..6073741))
location: region:5936566-6073741:-1
so has part: feature:6073566-6073741:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006291:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957603:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936566-5936917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006291:-1:exon

position:6006291:-1
position: 6006291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6003209-6003353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5966273-5966345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5957484-5957603:-1:exon

position:5957603:-1
position: 5957603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5957256-5957387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5936566-5936917:-1:exon

cabcoco1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cabcoco1
product: ciliary associated calcium binding coiled-coil 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609118.1
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936566..5936917,5957256..5957387,5957484..5957663,5966273..5966345,6003209..6003353,6006122..6006291,6015121..6015227,6073566..6073741))
location: region:5936566-6073741:-1
so has part: feature:6073566-6073741:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006291:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957663:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936566-5936917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6003209-6003353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5966273-5966345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5957484-5957663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5957256-5957387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5936566-5936917:-1:exon

cabcoco1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cabcoco1
product: ciliary associated calcium binding coiled-coil 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609119.1
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936566..5936917,5957256..5957387,5957484..5957603,5966273..5966345,6003209..6003353,6005742..6005789,6006122..6006291,6015121..6015227,6073566..6073741))
location: region:5936566-6073741:-1
so has part: feature:6073566-6073741:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006291:-1:exon
so has part: feature:6005742-6005789:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957603:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936566-5936917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6005742-6005789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003209-6003353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5966273-5966345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5957484-5957603:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5957256-5957387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5936566-5936917:-1:exon

cabcoco1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cabcoco1
product: ciliary associated calcium binding coiled-coil 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609116.1
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936566..5936917,5957256..5957387,5957484..5957663,5966273..5966345,6003209..6003353,6005742..6005789,6006122..6006291,6015121..6015227,6073566..6073741))
location: region:5936566-6073741:-1
so has part: feature:6073566-6073741:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006291:-1:exon
so has part: feature:6005742-6005789:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957663:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936566-5936917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6005742-6005789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003209-6003353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5966273-5966345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5957484-5957663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5957256-5957387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5936566-5936917:-1:exon

cabcoco1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cabcoco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ciliary-associated calcium-binding coiled-coil protein 1 isoform X2
translation: MSVHRVKSRSGRSQVDSPTSQSGHSTKSNLPSQKISDKTLAEDQADGKVPGVHRENTLAWKFISSEQISDLIQLTVDGVQKLAEILQLSLFEYCMKQGILLDYYVSGFWWAKEQNFTMIQISTFMTLLKTILANVGDAILKCQNTSQDHHRNEKRLSLLDNLKELKNIMAKIVQSSSEKSDDGEFFTVDQGKAIISYMKISLFQHYKLYEFLYNQTPDIQILDTKETKPKRMCTNPKLRCYSCFKLDVEVIKSVDPFPSPLEESLTWDIYSSYVLSQSPEEFVEEAAVEAEESNEEAQITPVDPLAGYTIDDVKSILGEITADVLRNLQTEINERLQKQEEAYTVRINKLIQH
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936843..5936917,5957256..5957387,5957484..5957663,5966273..5966345,6003209..6003353,6005742..6005789,6006122..6006288,6015121..6015227,6073566..6073700))
location: region:5936843-6073700:-1
so has part: feature:6073566-6073700:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006288:-1:exon
so has part: feature:6005742-6005789:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957663:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936843-5936917:-1:exon

XP_048465074.1
type: Protein
SIO_000068: ncbiprotein

position:5936843:-1
position: 5936843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6073700:-1
position: 6073700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006288:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6005742-6005789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003209-6003353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5966273-5966345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5957484-5957663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5957256-5957387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5936843-5936917:-1:exon

cabcoco1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cabcoco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ciliary-associated calcium-binding coiled-coil protein 1 isoform X5
translation: MSVHRVKSRSGRSQVDSPTSQSGHSTKSNLPSQKISDKTLAEDQADGKVPGVHRENTLAWKFISSEQISDLIQLTVDGVQKRLAEILQLSLFEYCMKQGILLDYYVSGFWWAKEQNFTMIQISTFMTLLKTILANVGEKRLSLLDNLKELKNIMAKIVQSSSEKSDDGEFFTVDQGKAIISYMKISLFQHYKLYEFLYNQTPDIQILDTKLDVEVIKSVDPFPSPLEESLTWDIYSSYVLSQSPEEFVEEAAVEAEESNEEAQITPVDPLAGYTIDDVKSILGEITADVLRNLQTEINERLQKQEEAYTVRINKLIQH
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936843..5936917,5957256..5957387,5957484..5957603,5966273..5966345,6003209..6003353,6006122..6006291,6015121..6015227,6073566..6073700))
location: region:5936843-6073700:-1
so has part: feature:6073566-6073700:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006291:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957603:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936843-5936917:-1:exon

XP_048465078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6003209-6003353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5966273-5966345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5957484-5957603:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5957256-5957387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5936843-5936917:-1:exon

cabcoco1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cabcoco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ciliary-associated calcium-binding coiled-coil protein 1 isoform X3
translation: MSVHRVKSRSGRSQVDSPTSQSGHSTKSNLPSQKISDKTLAEDQADGKVPGVHRENTLAWKFISSEQISDLIQLTVDGVQKRLAEILQLSLFEYCMKQGILLDYYVSGFWWAKEQNFTMIQISTFMTLLKTILANVGEKRLSLLDNLKELKNIMAKIVQSSSEKSDDGEFFTVDQGKAIISYMKISLFQHYKLYEFLYNQTPDIQILDTKETKPKRMCTNPKLRCYSCFKLDVEVIKSVDPFPSPLEESLTWDIYSSYVLSQSPEEFVEEAAVEAEESNEEAQITPVDPLAGYTIDDVKSILGEITADVLRNLQTEINERLQKQEEAYTVRINKLIQH
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936843..5936917,5957256..5957387,5957484..5957663,5966273..5966345,6003209..6003353,6006122..6006291,6015121..6015227,6073566..6073700))
location: region:5936843-6073700:-1
so has part: feature:6073566-6073700:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006291:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957663:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936843-5936917:-1:exon

XP_048465075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6003209-6003353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5966273-5966345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5957484-5957663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5957256-5957387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5936843-5936917:-1:exon

cabcoco1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cabcoco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ciliary-associated calcium-binding coiled-coil protein 1 isoform X4
translation: MSVHRVKSRSGRSQVDSPTSQSGHSTKSNLPSQKISDKTLAEDQADGKVPGVHRENTLAWKFISSEQISDLIQLTVDGVQKRLAEILQLSLFEYCMKQGILLDYYVSGFWWAKEQNFTMIQISTFMTLLKTILANVGDAILKCQNTSQDHHRNEKRLSLLDNLKELKNIMAKIVQSSSEKSDDGEFFTVDQGKAIISYMKISLFQHYKLYEFLYNQTPDIQILDTKLDVEVIKSVDPFPSPLEESLTWDIYSSYVLSQSPEEFVEEAAVEAEESNEEAQITPVDPLAGYTIDDVKSILGEITADVLRNLQTEINERLQKQEEAYTVRINKLIQH
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936843..5936917,5957256..5957387,5957484..5957603,5966273..5966345,6003209..6003353,6005742..6005789,6006122..6006291,6015121..6015227,6073566..6073700))
location: region:5936843-6073700:-1
so has part: feature:6073566-6073700:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006291:-1:exon
so has part: feature:6005742-6005789:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957603:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936843-5936917:-1:exon

XP_048465076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6005742-6005789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003209-6003353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5966273-5966345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5957484-5957603:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5957256-5957387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5936843-5936917:-1:exon

cabcoco1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cabcoco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ciliary-associated calcium-binding coiled-coil protein 1 isoform X1
translation: MSVHRVKSRSGRSQVDSPTSQSGHSTKSNLPSQKISDKTLAEDQADGKVPGVHRENTLAWKFISSEQISDLIQLTVDGVQKRLAEILQLSLFEYCMKQGILLDYYVSGFWWAKEQNFTMIQISTFMTLLKTILANVGDAILKCQNTSQDHHRNEKRLSLLDNLKELKNIMAKIVQSSSEKSDDGEFFTVDQGKAIISYMKISLFQHYKLYEFLYNQTPDIQILDTKETKPKRMCTNPKLRCYSCFKLDVEVIKSVDPFPSPLEESLTWDIYSSYVLSQSPEEFVEEAAVEAEESNEEAQITPVDPLAGYTIDDVKSILGEITADVLRNLQTEINERLQKQEEAYTVRINKLIQH
SIO_010081: cabcoco1
subclass of: SO_0000673
so part of: cabcoco1
location: complement(join(5936843..5936917,5957256..5957387,5957484..5957663,5966273..5966345,6003209..6003353,6005742..6005789,6006122..6006291,6015121..6015227,6073566..6073700))
location: region:5936843-6073700:-1
so has part: feature:6073566-6073700:-1:exon
so has part: feature:6015121-6015227:-1:exon
so has part: feature:6006122-6006291:-1:exon
so has part: feature:6005742-6005789:-1:exon
so has part: feature:6003209-6003353:-1:exon
so has part: feature:5966273-5966345:-1:exon
so has part: feature:5957484-5957663:-1:exon
so has part: feature:5957256-5957387:-1:exon
so has part: feature:5936843-5936917:-1:exon

XP_048465073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6073566-6073700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015121-6015227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6006122-6006291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6005742-6005789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003209-6003353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5966273-5966345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5957484-5957663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5957256-5957387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5936843-5936917:-1:exon

tmem26b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: tmem26b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6098290..6128377
location: region:6098290-6128377:1
so has part: feature:6098290-6128377:1:exon
subclass of: SO_0000010

109911522
type: Gene
SIO_000068: ncbigene

position:6098290:1
position: 6098290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6128377:1
position: 6128377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6098290-6128377:1:exon

tmem26b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tmem26b
product: transmembrane protein 26b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048609155.1
SIO_010081: tmem26b
subclass of: SO_0000673
so part of: tmem26b
location: join(6098290..6098517,6105127..6105190,6111503..6111679,6125390..6125458,6125730..6125935,6126020..6126096,6127753..6128377)
location: region:6098290-6128377:1
so has part: feature:6098290-6098517:1:exon
so has part: feature:6105127-6105190:1:exon
so has part: feature:6111503-6111679:1:exon
so has part: feature:6125390-6125458:1:exon
so has part: feature:6125730-6125935:1:exon
so has part: feature:6126020-6126096:1:exon
so has part: feature:6127753-6128377:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6098290-6098517:1:exon

position:6098517:1
position: 6098517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6105127-6105190:1:exon

position:6105127:1
position: 6105127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6105190:1
position: 6105190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6111503-6111679:1:exon

position:6111503:1
position: 6111503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6111679:1
position: 6111679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6125390-6125458:1:exon

position:6125390:1
position: 6125390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6125458:1
position: 6125458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6125730-6125935:1:exon

position:6125730:1
position: 6125730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6125935:1
position: 6125935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6126020-6126096:1:exon

position:6126020:1
position: 6126020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6126096:1
position: 6126096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6127753-6128377:1:exon

position:6127753:1
position: 6127753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem26b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tmem26b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 26b
translation: MVLFVYLSAVVPRVVFILHTVLAVWRVTLVKNDPLYWLLLLLILLTLVEMIVTLTVRKGKDYRGMDALALDSSVKGHEVNSSANEGDRSRLFLPPLQTPGGAPSPPALPVLVCDTIAAAEAATSLVSSCCLRNLPGARTPTYCQNFVPSTEAPATKGRENSSSTINVVIDFLNSTLDWTLGFHQTLMILLIVGKWILPMGVGISRDQLSQLLLTFVGIAADILEFKSETLSEKGVRCHPELVYAILALWTWSMLQFPLDLTVLQKTEESYPQEDRPKKKDHLHKYSADLWNITISILIQDGPFFTFRLFLMFHQGIVHQMLVFFTIKNALVLTLQIYRLTLIYLEMRQSNERQQLTPPEDNVPTYNTEMGDIAE
SIO_010081: tmem26b
subclass of: SO_0000673
so part of: tmem26b
location: join(6098327..6098517,6105127..6105190,6111503..6111679,6125390..6125458,6125730..6125935,6126020..6126096,6127753..6128093)
location: region:6098327-6128093:1
so has part: feature:6098327-6098517:1:exon
so has part: feature:6105127-6105190:1:exon
so has part: feature:6111503-6111679:1:exon
so has part: feature:6125390-6125458:1:exon
so has part: feature:6125730-6125935:1:exon
so has part: feature:6126020-6126096:1:exon
so has part: feature:6127753-6128093:1:exon

XP_048465112.1
type: Protein
SIO_000068: ncbiprotein

position:6098327:1
position: 6098327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6128093:1
position: 6128093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6098327-6098517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6105127-6105190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6111503-6111679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6125390-6125458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6125730-6125935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6126020-6126096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6127753-6128093:1:exon

rhobtb1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: rhobtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6214746..6282640
location: region:6214746-6282640:1
so has part: feature:6214746-6282640:1:exon
subclass of: SO_0000010

109911523
type: Gene
SIO_000068: ncbigene

position:6214746:1
position: 6214746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6282640:1
position: 6282640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6214746-6282640:1:exon

rhobtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rhobtb1
product: Rho related BTB domain containing 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609061.1
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6214746..6214765,6240905..6241106,6241869..6241972,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6282640)
location: region:6214746-6282640:1
so has part: feature:6214746-6214765:1:exon
so has part: feature:6240905-6241106:1:exon
so has part: feature:6241869-6241972:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6282640:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6214746-6214765:1:exon

position:6214765:1
position: 6214765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6240905-6241106:1:exon

position:6240905:1
position: 6240905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6241106:1
position: 6241106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6241869-6241972:1:exon

position:6241869:1
position: 6241869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6241972:1
position: 6241972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6255177-6255362:1:exon

position:6255177:1
position: 6255177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6255362:1
position: 6255362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6265506-6266491:1:exon

position:6265506:1
position: 6265506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6266491:1
position: 6266491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6268388-6268506:1:exon

position:6268388:1
position: 6268388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6268506:1
position: 6268506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6274211-6274361:1:exon

position:6274211:1
position: 6274211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6274361:1
position: 6274361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6274783-6274871:1:exon

position:6274783:1
position: 6274783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6274871:1
position: 6274871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6279173-6279278:1:exon

position:6279173:1
position: 6279173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6279278:1
position: 6279278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6281126-6282640:1:exon

position:6281126:1
position: 6281126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rhobtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rhobtb1
product: Rho related BTB domain containing 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609060.1
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6217130..6217528,6240905..6241106,6241869..6241972,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6282640)
location: region:6217130-6282640:1
so has part: feature:6217130-6217528:1:exon
so has part: feature:6240905-6241106:1:exon
so has part: feature:6241869-6241972:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6282640:1:exon

position:6217130:1
position: 6217130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6217130-6217528:1:exon

position:6217528:1
position: 6217528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6240905-6241106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6241869-6241972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6255177-6255362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6265506-6266491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6268388-6268506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6274211-6274361:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6274783-6274871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6279173-6279278:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6281126-6282640:1:exon

rhobtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rhobtb1
product: Rho related BTB domain containing 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020510844.2
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6217130..6217464,6240905..6241106,6241869..6241972,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6282640)
location: region:6217130-6282640:1
so has part: feature:6217130-6217464:1:exon
so has part: feature:6240905-6241106:1:exon
so has part: feature:6241869-6241972:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6282640:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6217130-6217464:1:exon

position:6217464:1
position: 6217464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6240905-6241106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6241869-6241972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6255177-6255362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6265506-6266491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6268388-6268506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6274211-6274361:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6274783-6274871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6279173-6279278:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6281126-6282640:1:exon

rhobtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rhobtb1
product: Rho related BTB domain containing 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609062.1
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6223821..6223840,6240905..6241106,6241869..6241972,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6282640)
location: region:6223821-6282640:1
so has part: feature:6223821-6223840:1:exon
so has part: feature:6240905-6241106:1:exon
so has part: feature:6241869-6241972:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6282640:1:exon

position:6223821:1
position: 6223821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6223821-6223840:1:exon

position:6223840:1
position: 6223840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6240905-6241106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6241869-6241972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6255177-6255362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6265506-6266491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6268388-6268506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6274211-6274361:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6274783-6274871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6279173-6279278:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6281126-6282640:1:exon

rhobtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rhobtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related BTB domain-containing protein 1 isoform X1
translation: MDTAMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLSTHVPTVWAIDQYRVCQEVLERSRDVVDEVSISLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVRTMWFPEIKHFCPRTPVVLVGCQLDLRYADLEAVNRARRPLARPIKPNDILPPEKGREVAKELGIPYYETSVFDQFGIKDVFDNAVRGALISRRHLQFWKSHLKKVQKPLLQAPFLPPKPPPPVMKVPDNPVSAFKPSHLLDNPLCADVMFVLQNQVKIYAHKVYLATSSSKFYDLFLLDLPAESWKHNKKNEKPVKLGQDHLMRTLSLDTDDDSSEISVGSTPSILRTSKSDSTLKMNMHEDESSEEKGAPSGRSLSLWSKAFNHIHEEDLENPVTKRMGLMTVVKMDHSIQPGPFEAVLRFLYTGELDENEKDLMRIAQIAELLEVFDLRMMVENIQNKEAFMNQEITKAFHVRKANRIKECLAKGTFSDVTLKLEDGSINGHKSLLISSCEWMAAMFGGSFLESSNKEVYFPNTSKTCMQAVLEYLYTSQFSFSSKLDPIELIVLANRLCLPRFVALTEQYAVQELLKSVKEGDDIDGEVLTYLELAQFHNAHQLAAWCLHHICTSYNSVCYKFRKEIKAISPENQEYFEKHRWPPVWYLKEEDHYQRVKKEREKDEVALHKHHSKRRWCFWHHSAVA
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6240915..6241106,6241869..6241972,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6281292)
location: region:6240915-6281292:1
so has part: feature:6240915-6241106:1:exon
so has part: feature:6241869-6241972:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6281292:1:exon

XP_020366433.1
type: Protein
SIO_000068: ncbiprotein

position:6240915:1
position: 6240915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6281292:1
position: 6281292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6240915-6241106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241869-6241972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6255177-6255362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6265506-6266491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6268388-6268506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6274211-6274361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6274783-6274871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6279173-6279278:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6281126-6281292:1:exon

rhobtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rhobtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related BTB domain-containing protein 1 isoform X1
translation: MDTAMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLSTHVPTVWAIDQYRVCQEVLERSRDVVDEVSISLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVRTMWFPEIKHFCPRTPVVLVGCQLDLRYADLEAVNRARRPLARPIKPNDILPPEKGREVAKELGIPYYETSVFDQFGIKDVFDNAVRGALISRRHLQFWKSHLKKVQKPLLQAPFLPPKPPPPVMKVPDNPVSAFKPSHLLDNPLCADVMFVLQNQVKIYAHKVYLATSSSKFYDLFLLDLPAESWKHNKKNEKPVKLGQDHLMRTLSLDTDDDSSEISVGSTPSILRTSKSDSTLKMNMHEDESSEEKGAPSGRSLSLWSKAFNHIHEEDLENPVTKRMGLMTVVKMDHSIQPGPFEAVLRFLYTGELDENEKDLMRIAQIAELLEVFDLRMMVENIQNKEAFMNQEITKAFHVRKANRIKECLAKGTFSDVTLKLEDGSINGHKSLLISSCEWMAAMFGGSFLESSNKEVYFPNTSKTCMQAVLEYLYTSQFSFSSKLDPIELIVLANRLCLPRFVALTEQYAVQELLKSVKEGDDIDGEVLTYLELAQFHNAHQLAAWCLHHICTSYNSVCYKFRKEIKAISPENQEYFEKHRWPPVWYLKEEDHYQRVKKEREKDEVALHKHHSKRRWCFWHHSAVA
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6240915..6241106,6241869..6241972,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6281292)
location: region:6240915-6281292:1
so has part: feature:6240915-6241106:1:exon
so has part: feature:6241869-6241972:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6281292:1:exon

XP_048465017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6240915-6241106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241869-6241972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6255177-6255362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6265506-6266491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6268388-6268506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6274211-6274361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6274783-6274871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6279173-6279278:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6281126-6281292:1:exon

rhobtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rhobtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related BTB domain-containing protein 1 isoform X1
translation: MDTAMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLSTHVPTVWAIDQYRVCQEVLERSRDVVDEVSISLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVRTMWFPEIKHFCPRTPVVLVGCQLDLRYADLEAVNRARRPLARPIKPNDILPPEKGREVAKELGIPYYETSVFDQFGIKDVFDNAVRGALISRRHLQFWKSHLKKVQKPLLQAPFLPPKPPPPVMKVPDNPVSAFKPSHLLDNPLCADVMFVLQNQVKIYAHKVYLATSSSKFYDLFLLDLPAESWKHNKKNEKPVKLGQDHLMRTLSLDTDDDSSEISVGSTPSILRTSKSDSTLKMNMHEDESSEEKGAPSGRSLSLWSKAFNHIHEEDLENPVTKRMGLMTVVKMDHSIQPGPFEAVLRFLYTGELDENEKDLMRIAQIAELLEVFDLRMMVENIQNKEAFMNQEITKAFHVRKANRIKECLAKGTFSDVTLKLEDGSINGHKSLLISSCEWMAAMFGGSFLESSNKEVYFPNTSKTCMQAVLEYLYTSQFSFSSKLDPIELIVLANRLCLPRFVALTEQYAVQELLKSVKEGDDIDGEVLTYLELAQFHNAHQLAAWCLHHICTSYNSVCYKFRKEIKAISPENQEYFEKHRWPPVWYLKEEDHYQRVKKEREKDEVALHKHHSKRRWCFWHHSAVA
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6240915..6241106,6241869..6241972,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6281292)
location: region:6240915-6281292:1
so has part: feature:6240915-6241106:1:exon
so has part: feature:6241869-6241972:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6281292:1:exon

XP_048465018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6240915-6241106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241869-6241972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6255177-6255362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6265506-6266491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6268388-6268506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6274211-6274361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6274783-6274871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6279173-6279278:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6281126-6281292:1:exon

rhobtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rhobtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related BTB domain-containing protein 1 isoform X1
translation: MDTAMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLSTHVPTVWAIDQYRVCQEVLERSRDVVDEVSISLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVRTMWFPEIKHFCPRTPVVLVGCQLDLRYADLEAVNRARRPLARPIKPNDILPPEKGREVAKELGIPYYETSVFDQFGIKDVFDNAVRGALISRRHLQFWKSHLKKVQKPLLQAPFLPPKPPPPVMKVPDNPVSAFKPSHLLDNPLCADVMFVLQNQVKIYAHKVYLATSSSKFYDLFLLDLPAESWKHNKKNEKPVKLGQDHLMRTLSLDTDDDSSEISVGSTPSILRTSKSDSTLKMNMHEDESSEEKGAPSGRSLSLWSKAFNHIHEEDLENPVTKRMGLMTVVKMDHSIQPGPFEAVLRFLYTGELDENEKDLMRIAQIAELLEVFDLRMMVENIQNKEAFMNQEITKAFHVRKANRIKECLAKGTFSDVTLKLEDGSINGHKSLLISSCEWMAAMFGGSFLESSNKEVYFPNTSKTCMQAVLEYLYTSQFSFSSKLDPIELIVLANRLCLPRFVALTEQYAVQELLKSVKEGDDIDGEVLTYLELAQFHNAHQLAAWCLHHICTSYNSVCYKFRKEIKAISPENQEYFEKHRWPPVWYLKEEDHYQRVKKEREKDEVALHKHHSKRRWCFWHHSAVA
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6240915..6241106,6241869..6241972,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6281292)
location: region:6240915-6281292:1
so has part: feature:6240915-6241106:1:exon
so has part: feature:6241869-6241972:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6281292:1:exon

XP_048465019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6240915-6241106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241869-6241972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6255177-6255362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6265506-6266491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6268388-6268506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6274211-6274361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6274783-6274871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6279173-6279278:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6281126-6281292:1:exon

rhobtb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rhobtb1
product: Rho related BTB domain containing 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048609063.1
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6241909..6241972,6254891..6254960,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6282640)
location: region:6241909-6282640:1
so has part: feature:6241909-6241972:1:exon
so has part: feature:6254891-6254960:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6282640:1:exon

position:6241909:1
position: 6241909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6241909-6241972:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6254891-6254960:1:exon

position:6254891:1
position: 6254891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6254960:1
position: 6254960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6255177-6255362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6265506-6266491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6268388-6268506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6274211-6274361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6274783-6274871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6279173-6279278:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6281126-6282640:1:exon

rhobtb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rhobtb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related BTB domain-containing protein 1 isoform X2
translation: MRSDVVVLCFSIANPNSLNHVRTMWFPEIKHFCPRTPVVLVGCQLDLRYADLEAVNRARRPLARPIKPNDILPPEKGREVAKELGIPYYETSVFDQFGIKDVFDNAVRGALISRRHLQFWKSHLKKVQKPLLQAPFLPPKPPPPVMKVPDNPVSAFKPSHLLDNPLCADVMFVLQNQVKIYAHKVYLATSSSKFYDLFLLDLPAESWKHNKKNEKPVKLGQDHLMRTLSLDTDDDSSEISVGSTPSILRTSKSDSTLKMNMHEDESSEEKGAPSGRSLSLWSKAFNHIHEEDLENPVTKRMGLMTVVKMDHSIQPGPFEAVLRFLYTGELDENEKDLMRIAQIAELLEVFDLRMMVENIQNKEAFMNQEITKAFHVRKANRIKECLAKGTFSDVTLKLEDGSINGHKSLLISSCEWMAAMFGGSFLESSNKEVYFPNTSKTCMQAVLEYLYTSQFSFSSKLDPIELIVLANRLCLPRFVALTEQYAVQELLKSVKEGDDIDGEVLTYLELAQFHNAHQLAAWCLHHICTSYNSVCYKFRKEIKAISPENQEYFEKHRWPPVWYLKEEDHYQRVKKEREKDEVALHKHHSKRRWCFWHHSAVA
SIO_010081: rhobtb1
subclass of: SO_0000673
so part of: rhobtb1
location: join(6254956..6254960,6255177..6255362,6265506..6266491,6268388..6268506,6274211..6274361,6274783..6274871,6279173..6279278,6281126..6281292)
location: region:6254956-6281292:1
so has part: feature:6254956-6254960:1:exon
so has part: feature:6255177-6255362:1:exon
so has part: feature:6265506-6266491:1:exon
so has part: feature:6268388-6268506:1:exon
so has part: feature:6274211-6274361:1:exon
so has part: feature:6274783-6274871:1:exon
so has part: feature:6279173-6279278:1:exon
so has part: feature:6281126-6281292:1:exon

XP_048465020.1
type: Protein
SIO_000068: ncbiprotein

position:6254956:1
position: 6254956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6254956-6254960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6255177-6255362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6265506-6266491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6268388-6268506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6274211-6274361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6274783-6274871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6279173-6279278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6281126-6281292:1:exon

cdk1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cdk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6290800..6301038)
location: region:6290800-6301038:-1
so has part: feature:6290800-6301038:-1:exon
subclass of: SO_0000010

109911524
type: Gene
SIO_000068: ncbigene

position:6290800:-1
position: 6290800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6301038:-1
position: 6301038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6290800-6301038:-1:exon

cdk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cdk1
product: cyclin-dependent kinase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048608864.1
SIO_010081: cdk1
subclass of: SO_0000673
so part of: cdk1
location: complement(join(6290800..6291164,6291904..6292042,6294476..6294639,6296191..6296361,6299428..6299551,6300886..6301038))
location: region:6290800-6301038:-1
so has part: feature:6300886-6301038:-1:exon
so has part: feature:6299428-6299551:-1:exon
so has part: feature:6296191-6296361:-1:exon
so has part: feature:6294476-6294639:-1:exon
so has part: feature:6291904-6292042:-1:exon
so has part: feature:6290800-6291164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6300886-6301038:-1:exon

position:6300886:-1
position: 6300886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6299428-6299551:-1:exon

position:6299428:-1
position: 6299428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6299551:-1
position: 6299551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6296191-6296361:-1:exon

position:6296191:-1
position: 6296191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6296361:-1
position: 6296361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6294476-6294639:-1:exon

position:6294476:-1
position: 6294476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6294639:-1
position: 6294639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6291904-6292042:-1:exon

position:6291904:-1
position: 6291904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6292042:-1
position: 6292042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6290800-6291164:-1:exon

position:6291164:-1
position: 6291164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cdk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cdk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 1
translation: MKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQDARLYLIFEFLSMDLKKYLDSLPTRQMMDQMLVKSYLYQITQGIAFCHSRRVLHRDLKPQNLLIDSKGVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSARYSTPVDIWSIGTIFAEMATKRPLFHGDSEIDQLFRIFRTLGTPNNEIWPEVEALPDYKNTFPKWKPGSLSQVKNIDANGLDLLAKTLIYDPARRISAKEALRHPYFDDLDKSSLPANIQRN
SIO_010081: cdk1
subclass of: SO_0000673
so part of: cdk1
location: complement(join(6291051..6291164,6291904..6292042,6294476..6294639,6296191..6296361,6299428..6299551,6300886..6300986))
location: region:6291051-6300986:-1
so has part: feature:6300886-6300986:-1:exon
so has part: feature:6299428-6299551:-1:exon
so has part: feature:6296191-6296361:-1:exon
so has part: feature:6294476-6294639:-1:exon
so has part: feature:6291904-6292042:-1:exon
so has part: feature:6291051-6291164:-1:exon

XP_048464821.1
type: Protein
SIO_000068: ncbiprotein

position:6291051:-1
position: 6291051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6300986:-1
position: 6300986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6300886-6300986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6299428-6299551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6296191-6296361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6294476-6294639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6291904-6292042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6291051-6291164:-1:exon

ank3b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ank3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6682014..7027667
location: region:6682014-7027667:1
so has part: feature:6682014-7027667:1:exon
subclass of: SO_0000010

109921391
type: Gene
SIO_000068: ncbigene

position:6682014:1
position: 6682014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7027667:1
position: 7027667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6682014-7027667:1:exon

ank3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ank3b
product: ankyrin 3b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048609156.1
SIO_010081: ank3b
subclass of: SO_0000673
so part of: ank3b
location: join(6682014..6682124,6805708..6805809,6831595..6831693,6836002..6836100,6842483..6842581,6843988..6844173,6847938..6847961,6852926..6853024,6855928..6856026,6858641..6858739,6860350..6860547,6863884..6863982,6865187..6865285,6874251..6874349,6901738..6901935,6903492..6903590,6905237..6905335,6905443..6905541,6911761..6911859,6912019..6912091,6913595..6913651,6921342..6921347,6937768..6937900,6943175..6943186,6955727..6955820,6958606..6958668,6964263..6964369,6969677..6969901,6972976..6973130,6986771..6986982,6992973..6993177,6995009..6995105,6997409..6997637,7001263..7001388,7002696..7002818,7003269..7003295,7005089..7005173,7006965..7014695,7015280..7015354,7026841..7026972,7027474..7027667)
location: region:6682014-7027667:1
so has part: feature:6682014-6682124:1:exon
so has part: feature:6805708-6805809:1:exon
so has part: feature:6831595-6831693:1:exon
so has part: feature:6836002-6836100:1:exon
so has part: feature:6842483-6842581:1:exon
so has part: feature:6843988-6844173:1:exon
so has part: feature:6847938-6847961:1:exon
so has part: feature:6852926-6853024:1:exon
so has part: feature:6855928-6856026:1:exon
so has part: feature:6858641-6858739:1:exon
so has part: feature:6860350-6860547:1:exon
so has part: feature:6863884-6863982:1:exon
so has part: feature:6865187-6865285:1:exon
so has part: feature:6874251-6874349:1:exon
so has part: feature:6901738-6901935:1:exon
so has part: feature:6903492-6903590:1:exon
so has part: feature:6905237-6905335:1:exon
so has part: feature:6905443-6905541:1:exon
so has part: feature:6911761-6911859:1:exon
so has part: feature:6912019-6912091:1:exon
so has part: feature:6913595-6913651:1:exon
so has part: feature:6921342-6921347:1:exon
so has part: feature:6937768-6937900:1:exon
so has part: feature:6943175-6943186:1:exon
so has part: feature:6955727-6955820:1:exon
so has part: feature:6958606-6958668:1:exon
so has part: feature:6964263-6964369:1:exon
so has part: feature:6969677-6969901:1:exon
so has part: feature:6972976-6973130:1:exon
so has part: feature:6986771-6986982:1:exon
so has part: feature:6992973-6993177:1:exon
so has part: feature:6995009-6995105:1:exon
so has part: feature:6997409-6997637:1:exon
so has part: feature:7001263-7001388:1:exon
so has part: feature:7002696-7002818:1:exon
so has part: feature:7003269-7003295:1:exon
so has part: feature:7005089-7005173:1:exon
so has part: feature:7006965-7014695:1:exon
so has part: feature:7015280-7015354:1:exon
so has part: feature:7026841-7026972:1:exon
so has part: feature:7027474-7027667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6682014-6682124:1:exon

position:6682124:1
position: 6682124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6805708-6805809:1:exon

position:6805708:1
position: 6805708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6805809:1
position: 6805809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6831595-6831693:1:exon

position:6831595:1
position: 6831595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6831693:1
position: 6831693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6836002-6836100:1:exon

position:6836002:1
position: 6836002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6836100:1
position: 6836100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6842483-6842581:1:exon

position:6842483:1
position: 6842483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6842581:1
position: 6842581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6843988-6844173:1:exon

position:6843988:1
position: 6843988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6844173:1
position: 6844173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6847938-6847961:1:exon

position:6847938:1
position: 6847938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6847961:1
position: 6847961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6852926-6853024:1:exon

position:6852926:1
position: 6852926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6853024:1
position: 6853024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6855928-6856026:1:exon

position:6855928:1
position: 6855928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6856026:1
position: 6856026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6858641-6858739:1:exon

position:6858641:1
position: 6858641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6858739:1
position: 6858739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6860350-6860547:1:exon

position:6860350:1
position: 6860350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6860547:1
position: 6860547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6863884-6863982:1:exon

position:6863884:1
position: 6863884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6863982:1
position: 6863982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6865187-6865285:1:exon

position:6865187:1
position: 6865187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6865285:1
position: 6865285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6874251-6874349:1:exon

position:6874251:1
position: 6874251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6874349:1
position: 6874349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6901738-6901935:1:exon

position:6901738:1
position: 6901738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6901935:1
position: 6901935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6903492-6903590:1:exon

position:6903492:1
position: 6903492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6903590:1
position: 6903590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6905237-6905335:1:exon

position:6905237:1
position: 6905237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6905335:1
position: 6905335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6905443-6905541:1:exon

position:6905443:1
position: 6905443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6905541:1
position: 6905541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6911761-6911859:1:exon

position:6911761:1
position: 6911761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6911859:1
position: 6911859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6912019-6912091:1:exon

position:6912019:1
position: 6912019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6912091:1
position: 6912091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6913595-6913651:1:exon

position:6913595:1
position: 6913595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6913651:1
position: 6913651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6921342-6921347:1:exon

position:6921342:1
position: 6921342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6921347:1
position: 6921347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6937768-6937900:1:exon

position:6937768:1
position: 6937768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6937900:1
position: 6937900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6943175-6943186:1:exon

position:6943175:1
position: 6943175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6943186:1
position: 6943186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6955727-6955820:1:exon

position:6955727:1
position: 6955727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6955820:1
position: 6955820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6958606-6958668:1:exon

position:6958606:1
position: 6958606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6958668:1
position: 6958668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6964263-6964369:1:exon

position:6964263:1
position: 6964263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6964369:1
position: 6964369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6969677-6969901:1:exon

position:6969677:1
position: 6969677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6969901:1
position: 6969901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6972976-6973130:1:exon

position:6972976:1
position: 6972976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6973130:1
position: 6973130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6986771-6986982:1:exon

position:6986771:1
position: 6986771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6986982:1
position: 6986982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6992973-6993177:1:exon

position:6992973:1
position: 6992973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6993177:1
position: 6993177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6995009-6995105:1:exon

position:6995009:1
position: 6995009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6995105:1
position: 6995105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:6997409-6997637:1:exon

position:6997409:1
position: 6997409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6997637:1
position: 6997637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7001263-7001388:1:exon

position:7001263:1
position: 7001263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7001388:1
position: 7001388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7002696-7002818:1:exon

position:7002696:1
position: 7002696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7002818:1
position: 7002818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7003269-7003295:1:exon

position:7003269:1
position: 7003269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7003295:1
position: 7003295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7005089-7005173:1:exon

position:7005089:1
position: 7005089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7005173:1
position: 7005173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:7006965-7014695:1:exon

position:7006965:1
position: 7006965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7014695:1
position: 7014695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:7015280-7015354:1:exon

position:7015280:1
position: 7015280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7015354:1
position: 7015354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:7026841-7026972:1:exon

position:7026841:1
position: 7026841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7026972:1
position: 7026972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:7027474-7027667:1:exon

position:7027474:1
position: 7027474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ank3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ank3b
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:join(6913651,6921342..6921343), aa:OTHER)
product: LOW QUALITY PROTEIN: ankyrin-3
translation: MAHAASHIKKNRELEAATEDEKVVKKHRKRSRDRKRKTDTNASYLRAARAGNLEKALDYIKAGVDINICNQNGLNALHLASKEGHIGVVSELIQLGANVDAATKKGNTALHIASLAGQAEVVHVLVTNGANINAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSIATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDHNADVESKVMVNRTTESGFTPLHIAAHYGNINIATLLLNRGAAVDFTARNDITPLHVASKRGNANMVKLLLDRGSQIEAKTRDGLTPLHCAARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLHSVKLLLLHDVPVDDVTNDYLTALHVAAHCGHYKVAKVLLEKKANPNAKALNGFTPLHIACKKNRIKVMDLLLKYGASIQAVTESGLTPIHVAAFMGHTNIVTQLMQRGASPNTTNVRGETALHMAARAGQADVVRHLVQNGAQVEAKAKNGYTPLHIAAKKNQMDIATTLLEYGADTNTVTKQGITPVHLAAQEGHVDMVSLLLTRNADVNLGNKSGLTPLHLAAQEDRVNVAEVLVNQGAAIDPQTKMGYIPLHVACHYGNVKMVNFLLQHNAKVNAKTKNGYTPLHQAAQQGHTHIINILLQHGASPDEVTMNGNTALAIAKRLGYISVVDTLKVVTEETLTTTMSVTEKHKLNVPETMNEVLDVSDDEVHKASVPEFVSEAESLSDTXEGDDAMTGDTDKYLGPQDLKELGDDSLPVEGNMSYMGFSLGARSASPKISLRSFSSDRSYSLNRSPYTRDSIMIEEMTKEVQGFQPELAPSMEGPVVSNSLKHLAVSREYDSDSLKRFSWTADTLDNINLVSSPIHSGFLVSFMVDARGGSMRGSRHNGMRIIIPPRKCTAPTRITCRLVKRHKLASPPPMVEGEGLASRLVEVGPSGAQFLGPVIVEIPHFGSMRDKERELIVLRSENGEVWKEHQYDCKEQELNEILNGMDEELDSLEELEKKRICRIITKDFPQYFAVVSRIKQESNQMGPEGGMLSSTNIPLVQASFPEGALTKRIRVGLQAQPIPDELVKKILGNRATFSPIVTVEPRRRKFHKPITMTIPVPPTSGGDVSNGYRGETPSLRLLCSITGGTSPAQWEEITGTTPLTFVNDAVSFTTNVSARFWLVDCRQVPETVSLATQLYRELICVPYMAKFVVFAKMHDPVEAHLRCFCMTDDKVDKTLEQQENFTEVARSKDIEVLEGKPIFVDCYGNLVPLAKAGQQLVFNFYAFKENRLPFGVKVRDNSQEPCGRLSFLKEPKTSKGLPQAAICNLNITLPAHKKETESDPDEEAERASERRQSFASMALRKRYSYLAEPGMKLIERSTGTTRSLPAPYSYKPVFSARPFQSWAAAPVSVAGVVKSGIASLSNSTSNTPTASPLKSVWSVSSSSPIKSTLGASATSSVRSVSDLASPIRSFKSTPSPIKTVVTQTQYSVKSSSALNSSPVKALVAPESPSGKGIAASLFSSRLSPATTAGLLLERSSITMTPPASPKAAFNAYASPSPFKTTAAPTVLPSSVKSLSSSGSSPVKSVTDAAFSPFKPATPPNGQAVAKGAVSPVKYPPATAFFCGQGAGATPEKAPGAALSAKSVAIAQDVVEKAQQAAATAVAFSPLKSLVPATASAFQAIRLPPAGSLYSTLRSSSVTTTSVTSSTMTVPVYSVVNVLSEPQLKRLPDAGPLTKSAAALLPPVKSLTTESHAQPQPPFTCTLSPLKSSLSLAPSALKLASASTLSSSQEILKDVAEMKEDLMKMTAILQTDASSDKAFPEVSAKVGRSEDESEEPFKLVKKVKEDLEKVSEILQKDGLSETKHGTEGAQTNGDLSGEGEWVTFDYDNAEEAKERASEELSTYVHMKAKSGGEKDFSLARVVDYLANDLGIDTFSKVADKYRQTDTKKEGEEKMFSRRAQKPAMPLPEHKLKMPPSPMRSSASEKELSKLADAM…
SIO_010081: ank3b
subclass of: SO_0000673
so part of: ank3b
location: join(6682014..6682124,6805708..6805809,6831595..6831693,6836002..6836100,6842483..6842581,6843988..6844173,6847938..6847961,6852926..6853024,6855928..6856026,6858641..6858739,6860350..6860547,6863884..6863982,6865187..6865285,6874251..6874349,6901738..6901935,6903492..6903590,6905237..6905335,6905443..6905541,6911761..6911859,6912019..6912091,6913595..6913651,6921342..6921347,6937768..6937900,6943175..6943186,6955727..6955820,6958606..6958668,6964263..6964369,6969677..6969901,6972976..6973130,6986771..6986982,6992973..6993177,6995009..6995105,6997409..6997637,7001263..7001388,7002696..7002818,7003269..7003295,7005089..7005173,7006965..7014695,7015280..7015354,7026841..7026972,7027474..7027667)
location: region:6682014-7027667:1
so has part: feature:6682014-6682124:1:exon
so has part: feature:6805708-6805809:1:exon
so has part: feature:6831595-6831693:1:exon
so has part: feature:6836002-6836100:1:exon
so has part: feature:6842483-6842581:1:exon
so has part: feature:6843988-6844173:1:exon
so has part: feature:6847938-6847961:1:exon
so has part: feature:6852926-6853024:1:exon
so has part: feature:6855928-6856026:1:exon
so has part: feature:6858641-6858739:1:exon
so has part: feature:6860350-6860547:1:exon
so has part: feature:6863884-6863982:1:exon
so has part: feature:6865187-6865285:1:exon
so has part: feature:6874251-6874349:1:exon
so has part: feature:6901738-6901935:1:exon
so has part: feature:6903492-6903590:1:exon
so has part: feature:6905237-6905335:1:exon
so has part: feature:6905443-6905541:1:exon
so has part: feature:6911761-6911859:1:exon
so has part: feature:6912019-6912091:1:exon
so has part: feature:6913595-6913651:1:exon
so has part: feature:6921342-6921347:1:exon
so has part: feature:6937768-6937900:1:exon
so has part: feature:6943175-6943186:1:exon
so has part: feature:6955727-6955820:1:exon
so has part: feature:6958606-6958668:1:exon
so has part: feature:6964263-6964369:1:exon
so has part: feature:6969677-6969901:1:exon
so has part: feature:6972976-6973130:1:exon
so has part: feature:6986771-6986982:1:exon
so has part: feature:6992973-6993177:1:exon
so has part: feature:6995009-6995105:1:exon
so has part: feature:6997409-6997637:1:exon
so has part: feature:7001263-7001388:1:exon
so has part: feature:7002696-7002818:1:exon
so has part: feature:7003269-7003295:1:exon
so has part: feature:7005089-7005173:1:exon
so has part: feature:7006965-7014695:1:exon
so has part: feature:7015280-7015354:1:exon
so has part: feature:7026841-7026972:1:exon
so has part: feature:7027474-7027667:1:exon

XP_048465113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6682014-6682124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6805708-6805809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6831595-6831693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6836002-6836100:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6842483-6842581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6843988-6844173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6847938-6847961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6852926-6853024:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6855928-6856026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6858641-6858739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6860350-6860547:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6863884-6863982:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6865187-6865285:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6874251-6874349:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6901738-6901935:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6903492-6903590:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6905237-6905335:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6905443-6905541:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6911761-6911859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6912019-6912091:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6913595-6913651:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6921342-6921347:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6937768-6937900:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6943175-6943186:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6955727-6955820:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6958606-6958668:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6964263-6964369:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6969677-6969901:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6972976-6973130:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6986771-6986982:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6992973-6993177:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6995009-6995105:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6997409-6997637:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7001263-7001388:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7002696-7002818:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7003269-7003295:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7005089-7005173:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7006965-7014695:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7015280-7015354:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7026841-7026972:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7027474-7027667:1:exon

ccdc6b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ccdc6b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7108398..7156536
location: region:7108398-7156536:1
so has part: feature:7108398-7156536:1:exon
subclass of: SO_0000010

109917407
type: Gene
SIO_000068: ncbigene

position:7108398:1
position: 7108398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7156536:1
position: 7156536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7108398-7156536:1:exon

ccdc6b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ccdc6b
product: coiled-coil domain containing 6b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_048608919.1
SIO_010081: ccdc6b
subclass of: SO_0000673
so part of: ccdc6b
location: join(7108398..7108696,7148231..7148380,7149336..7149464,7152325..7152428,7153869..7154029,7155641..7156536)
location: region:7108398-7156536:1
so has part: feature:7108398-7108696:1:exon
so has part: feature:7148231-7148380:1:exon
so has part: feature:7149336-7149464:1:exon
so has part: feature:7152325-7152428:1:exon
so has part: feature:7153869-7154029:1:exon
so has part: feature:7155641-7156536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7108398-7108696:1:exon

position:7108696:1
position: 7108696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7148231-7148380:1:exon

position:7148231:1
position: 7148231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7148380:1
position: 7148380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7149336-7149464:1:exon

position:7149336:1
position: 7149336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7149464:1
position: 7149464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7152325-7152428:1:exon

position:7152325:1
position: 7152325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7152428:1
position: 7152428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7153869-7154029:1:exon

position:7153869:1
position: 7153869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7154029:1
position: 7154029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7155641-7156536:1:exon

position:7155641:1
position: 7155641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ccdc6b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ccdc6b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 6b
translation: MADSASESDTDAAGSSSALPPANSSAASKAGIVISASKLEELSNRLASLQQENKVLKIELETYKLKCKALQEENRDLRKASVTIQARAEQEEEFISNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQTLEQEQEFQVNKLMKKIKKLENDTLSKQFTLEQLRREKIDLENTLEQEQEALVNRLWKRMDKLEAEKRILQEKLDQPVSAPPSPRDISMEIDSPENMMRHIRFLKNEVERLKKQLRAAQLQHTEKMAQYLEEERHMREENLRLQRKLQREMERREALCRQLSESESSLEMDDERFV
SIO_010081: ccdc6b
subclass of: SO_0000673
so part of: ccdc6b
location: join(7108445..7108696,7148231..7148380,7149336..7149464,7152325..7152428,7153869..7154029,7155641..7155807)
location: region:7108445-7155807:1
so has part: feature:7108445-7108696:1:exon
so has part: feature:7148231-7148380:1:exon
so has part: feature:7149336-7149464:1:exon
so has part: feature:7152325-7152428:1:exon
so has part: feature:7153869-7154029:1:exon
so has part: feature:7155641-7155807:1:exon

XP_048464876.1
type: Protein
SIO_000068: ncbiprotein

position:7108445:1
position: 7108445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7155807:1
position: 7155807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7108445-7108696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7148231-7148380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7149336-7149464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152325-7152428:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7153869-7154029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7155641-7155807:1:exon

LOC109925447
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7176396..7210454)
location: region:7176396-7210454:-1
so has part: feature:7176396-7210454:-1:exon
subclass of: SO_0000010

109925447
type: Gene
SIO_000068: ncbigene

position:7176396:-1
position: 7176396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7210454:-1
position: 7210454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7176396-7210454:-1:exon

LOC109925447
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925447
product: ankyrin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048609157.1
SIO_010081: LOC109925447
subclass of: SO_0000673
so part of: LOC109925447
location: complement(join(7176396..7176777,7179324..7179422,7182158..7182355,7202538..7202961,7209587..7210454))
location: region:7176396-7210454:-1
so has part: feature:7209587-7210454:-1:exon
so has part: feature:7202538-7202961:-1:exon
so has part: feature:7182158-7182355:-1:exon
so has part: feature:7179324-7179422:-1:exon
so has part: feature:7176396-7176777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7209587-7210454:-1:exon

position:7209587:-1
position: 7209587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7202538-7202961:-1:exon

position:7202538:-1
position: 7202538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7202961:-1
position: 7202961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7182158-7182355:-1:exon

position:7182158:-1
position: 7182158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7182355:-1
position: 7182355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7179324-7179422:-1:exon

position:7179324:-1
position: 7179324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7179422:-1
position: 7179422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7176396-7176777:-1:exon

position:7176777:-1
position: 7176777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109925447
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1-like
translation: MGEGVTSQQGQVNEMVGSEHETGLAITETSTLCIARPCSKTQQEDHNRSPEDGITARQEASSSQVQQEERSDSEELAKFKPKGLDVVQPGEGSDDEEVTKEEDQNLPHAQNSQNEFFAVPGWHSDSSSVDVEPPTPRRCNLSTDNLDEDNGNLQEQRIKNDLAASVMFHMKGQVLKPKENGDHDIHRLDRQRESGHATAGPLIQEVASDLPVTPQDRKTLNGKVHKRSVLITEQTEPATELQKDLAEMRRPGVDEYVSPLFGSERKTSWSSEVLKSGPNFRDDGSSPAEHKAQDDQTPLHIASRLGKADIVQQLLQHGASPDAATTSGYTPLHISAREGHEDVASVLLEQGASLSVNTKKGFTPLHVAAKYGRMEVANLLLQKSASPNASGKSGLTPLHVAAHYDNQKVALLLLDQGASPHATAKVQCTDSKDVGTKSQCNE
SIO_010081: LOC109925447
subclass of: SO_0000673
so part of: LOC109925447
location: complement(join(7176625..7176777,7179324..7179422,7182158..7182355,7202538..7202961,7209587..7210041))
location: region:7176625-7210041:-1
so has part: feature:7209587-7210041:-1:exon
so has part: feature:7202538-7202961:-1:exon
so has part: feature:7182158-7182355:-1:exon
so has part: feature:7179324-7179422:-1:exon
so has part: feature:7176625-7176777:-1:exon

XP_048465114.1
type: Protein
SIO_000068: ncbiprotein

position:7176625:-1
position: 7176625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7210041:-1
position: 7210041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7209587-7210041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7202538-7202961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7182158-7182355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7179324-7179422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7176625-7176777:-1:exon

LOC125485577
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125485577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7213913..7225506
location: region:7213913-7225506:1
so has part: feature:7213913-7225506:1:exon
subclass of: SO_0000011

125485577
type: Gene
SIO_000068: ncbigene

position:7213913:1
position: 7213913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7225506:1
position: 7225506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7213913-7225506:1:exon

LOC125485577
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125485577
product: uncharacterized LOC125485577
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007264288.1
SIO_010081: LOC125485577
subclass of: SO_0000673
so part of: LOC125485577
location: join(7213913..7214363,7221302..7221527,7224605..7224753,7224857..7225506)
location: region:7213913-7225506:1
so has part: feature:7213913-7214363:1:exon
so has part: feature:7221302-7221527:1:exon
so has part: feature:7224605-7224753:1:exon
so has part: feature:7224857-7225506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7213913-7214363:1:exon

position:7214363:1
position: 7214363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7221302-7221527:1:exon

position:7221302:1
position: 7221302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7221527:1
position: 7221527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7224605-7224753:1:exon

position:7224605:1
position: 7224605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7224753:1
position: 7224753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7224857-7225506:1:exon

position:7224857:1
position: 7224857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam13c
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: fam13c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7309250..7408178
location: region:7309250-7408178:1
so has part: feature:7309250-7408178:1:exon
subclass of: SO_0000010

109923073
type: Gene
SIO_000068: ncbigene

position:7309250:1
position: 7309250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7408178:1
position: 7408178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7309250-7408178:1:exon

fam13c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: fam13c
product: family with sequence similarity 13 member C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048608885.1
SIO_010081: fam13c
subclass of: SO_0000673
so part of: fam13c
location: join(7309250..7309332,7338183..7338292,7350037..7350103,7371307..7371454,7371744..7371797,7378035..7378245,7389870..7390008,7393355..7393436,7395128..7395339,7395460..7395543,7400132..7400227,7401629..7401834,7406196..7406297,7407346..7408178)
location: region:7309250-7408178:1
so has part: feature:7309250-7309332:1:exon
so has part: feature:7338183-7338292:1:exon
so has part: feature:7350037-7350103:1:exon
so has part: feature:7371307-7371454:1:exon
so has part: feature:7371744-7371797:1:exon
so has part: feature:7378035-7378245:1:exon
so has part: feature:7389870-7390008:1:exon
so has part: feature:7393355-7393436:1:exon
so has part: feature:7395128-7395339:1:exon
so has part: feature:7395460-7395543:1:exon
so has part: feature:7400132-7400227:1:exon
so has part: feature:7401629-7401834:1:exon
so has part: feature:7406196-7406297:1:exon
so has part: feature:7407346-7408178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7309250-7309332:1:exon

position:7309332:1
position: 7309332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7338183-7338292:1:exon

position:7338183:1
position: 7338183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7338292:1
position: 7338292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7350037-7350103:1:exon

position:7350037:1
position: 7350037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7350103:1
position: 7350103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7371307-7371454:1:exon

position:7371307:1
position: 7371307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7371454:1
position: 7371454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7371744-7371797:1:exon

position:7371744:1
position: 7371744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7371797:1
position: 7371797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7378035-7378245:1:exon

position:7378035:1
position: 7378035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7378245:1
position: 7378245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7389870-7390008:1:exon

position:7389870:1
position: 7389870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7390008:1
position: 7390008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7393355-7393436:1:exon

position:7393355:1
position: 7393355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7393436:1
position: 7393436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7395128-7395339:1:exon

position:7395128:1
position: 7395128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7395339:1
position: 7395339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7395460-7395543:1:exon

position:7395460:1
position: 7395460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7395543:1
position: 7395543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7400132-7400227:1:exon

position:7400132:1
position: 7400132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7400227:1
position: 7400227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7401629-7401834:1:exon

position:7401629:1
position: 7401629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7401834:1
position: 7401834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7406196-7406297:1:exon

position:7406196:1
position: 7406196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7406297:1
position: 7406297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7407346-7408178:1:exon

position:7407346:1
position: 7407346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam13c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: fam13c
product: family with sequence similarity 13 member C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048608887.1
SIO_010081: fam13c
subclass of: SO_0000673
so part of: fam13c
location: join(7309250..7309332,7338183..7338292,7350037..7350103,7371307..7371454,7371744..7371797,7378035..7378245,7389870..7390008,7393355..7393436,7395128..7395339,7400132..7400227,7401629..7401834,7406196..7406297,7407346..7408178)
location: region:7309250-7408178:1
so has part: feature:7309250-7309332:1:exon
so has part: feature:7338183-7338292:1:exon
so has part: feature:7350037-7350103:1:exon
so has part: feature:7371307-7371454:1:exon
so has part: feature:7371744-7371797:1:exon
so has part: feature:7378035-7378245:1:exon
so has part: feature:7389870-7390008:1:exon
so has part: feature:7393355-7393436:1:exon
so has part: feature:7395128-7395339:1:exon
so has part: feature:7400132-7400227:1:exon
so has part: feature:7401629-7401834:1:exon
so has part: feature:7406196-7406297:1:exon
so has part: feature:7407346-7408178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7309250-7309332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7338183-7338292:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7350037-7350103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7371307-7371454:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7371744-7371797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7378035-7378245:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7389870-7390008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7393355-7393436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7395128-7395339:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7400132-7400227:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7401629-7401834:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7406196-7406297:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7407346-7408178:1:exon

fam13c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: fam13c
product: family with sequence similarity 13 member C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048608886.1
SIO_010081: fam13c
subclass of: SO_0000673
so part of: fam13c
location: join(7309250..7309332,7338183..7338292,7350037..7350103,7371307..7371454,7378035..7378245,7389870..7390008,7393355..7393436,7395128..7395339,7395460..7395543,7400132..7400227,7401629..7401834,7406196..7406297,7407346..7408178)
location: region:7309250-7408178:1
so has part: feature:7309250-7309332:1:exon
so has part: feature:7338183-7338292:1:exon
so has part: feature:7350037-7350103:1:exon
so has part: feature:7371307-7371454:1:exon
so has part: feature:7378035-7378245:1:exon
so has part: feature:7389870-7390008:1:exon
so has part: feature:7393355-7393436:1:exon
so has part: feature:7395128-7395339:1:exon
so has part: feature:7395460-7395543:1:exon
so has part: feature:7400132-7400227:1:exon
so has part: feature:7401629-7401834:1:exon
so has part: feature:7406196-7406297:1:exon
so has part: feature:7407346-7408178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7309250-7309332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7338183-7338292:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7350037-7350103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7371307-7371454:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7378035-7378245:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7389870-7390008:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7393355-7393436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7395128-7395339:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7395460-7395543:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7400132-7400227:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7401629-7401834:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7406196-7406297:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7407346-7408178:1:exon

fam13c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: fam13c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM13C isoform X1
translation: MMERGSSSVADCRGSAEAATTKHTEGSILKQGERCIRENNMSPVETKQETPEQAQDSSENSLMKLQSFDIDLCSSFLPSPEESPGTQRSKEQPPQVNRNGIADEGSSGERAAPIIDFKLMHRQDSDEPIPAFEGWQSELENGVEAHRSLGAGRLLHHIAEGDNPLVSPRCSSFTKSQRFVLDTEAAPSPPSAQLFIMPRNSSLINSEAENSPMLMTQLTKQIQNLRKKIRKYEEKFEQEKKYRPSHSDKVGDPEVLRWMNDLTRARKQLKELKLKISEEENNRRHRHRSNALPINSRQDKENKHHVSGESQQKPSVEETVQIVMKKLKEKQEILGLPEDVKEMTQKQLRLDKVNMQNCLLHFESLYGRPVNKQERLLMKPLYDRYRSIRQLLSPAAAIPTIEEEGSDEETISKSCEISTRPIADFPFQEFVDNVDHRDEDHEPGFLPPLDEKKETRQPTTSLANLHEASMSELLEHLHETRAEKKKLRKALREFEEQFLKQTGRNVQKEDRIPMAEEYIQYKHTKAKLRLLEVLIAKLDGSKTVLSS
SIO_010081: fam13c
subclass of: SO_0000673
so part of: fam13c
location: join(7338183..7338292,7350037..7350103,7371307..7371454,7371744..7371797,7378035..7378245,7389870..7390008,7393355..7393436,7395128..7395339,7395460..7395543,7400132..7400227,7401629..7401834,7406196..7406297,7407346..7407478)
location: region:7338183-7407478:1
so has part: feature:7338183-7338292:1:exon
so has part: feature:7350037-7350103:1:exon
so has part: feature:7371307-7371454:1:exon
so has part: feature:7371744-7371797:1:exon
so has part: feature:7378035-7378245:1:exon
so has part: feature:7389870-7390008:1:exon
so has part: feature:7393355-7393436:1:exon
so has part: feature:7395128-7395339:1:exon
so has part: feature:7395460-7395543:1:exon
so has part: feature:7400132-7400227:1:exon
so has part: feature:7401629-7401834:1:exon
so has part: feature:7406196-7406297:1:exon
so has part: feature:7407346-7407478:1:exon

XP_048464842.1
type: Protein
SIO_000068: ncbiprotein

position:7407478:1
position: 7407478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7338183-7338292:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7350037-7350103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7371307-7371454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7371744-7371797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7378035-7378245:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7389870-7390008:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7393355-7393436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7395128-7395339:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7395460-7395543:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7400132-7400227:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7401629-7401834:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7406196-7406297:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7407346-7407478:1:exon

fam13c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: fam13c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM13C isoform X3
translation: MMERGSSSVADCRGSAEAATTKHTEGSILKQGERCIRENNMSPVETKQETPEQAQDSSENSLMKLQSFDIDLCSSFLPSPEESPGTQRSKEQPPQVNRNGIADEGSSGERAAPIIDFKLMHRQDSDEPIPAFEGWQSELENGVEAHRSLGAGRLLHHIAEGDNPLVSPRCSSFTKSQRFVLDTEAAPSPPSAQLFIMPRNSSLINSEAENSPMLMTQLTKQIQNLRKKIRKYEEKFEQEKKYRPSHSDKVGDPEVLRWMNDLTRARKQLKELKLKISEEENNRRHRHRSNALPINSRQDKENKHHVSGESQQKPSVEETVQIVMKKLKEKQEILGLPEDVKVNKQERLLMKPLYDRYRSIRQLLSPAAAIPTIEEEGSDEETISKSCEISTRPIADFPFQEFVDNVDHRDEDHEPGFLPPLDEKKETRQPTTSLANLHEASMSELLEHLHETRAEKKKLRKALREFEEQFLKQTGRNVQKEDRIPMAEEYIQYKHTKAKLRLLEVLIAKLDGSKTVLSS
SIO_010081: fam13c
subclass of: SO_0000673
so part of: fam13c
location: join(7338183..7338292,7350037..7350103,7371307..7371454,7371744..7371797,7378035..7378245,7389870..7390008,7393355..7393436,7395128..7395339,7400132..7400227,7401629..7401834,7406196..7406297,7407346..7407478)
location: region:7338183-7407478:1
so has part: feature:7338183-7338292:1:exon
so has part: feature:7350037-7350103:1:exon
so has part: feature:7371307-7371454:1:exon
so has part: feature:7371744-7371797:1:exon
so has part: feature:7378035-7378245:1:exon
so has part: feature:7389870-7390008:1:exon
so has part: feature:7393355-7393436:1:exon
so has part: feature:7395128-7395339:1:exon
so has part: feature:7400132-7400227:1:exon
so has part: feature:7401629-7401834:1:exon
so has part: feature:7406196-7406297:1:exon
so has part: feature:7407346-7407478:1:exon

XP_048464844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7338183-7338292:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7350037-7350103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7371307-7371454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7371744-7371797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7378035-7378245:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7389870-7390008:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7393355-7393436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7395128-7395339:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7400132-7400227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7401629-7401834:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7406196-7406297:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7407346-7407478:1:exon

fam13c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: fam13c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM13C isoform X2
translation: MMERGSSSVADCRGSAEAATTKHTEGSILKQGERCIRENNMSPVETKQETPEQAQDSSENSLMKLQSFDIDLCSSFLPSPEESPGTQRSKEQPPQVNRNGIADEGSSGEPIPAFEGWQSELENGVEAHRSLGAGRLLHHIAEGDNPLVSPRCSSFTKSQRFVLDTEAAPSPPSAQLFIMPRNSSLINSEAENSPMLMTQLTKQIQNLRKKIRKYEEKFEQEKKYRPSHSDKVGDPEVLRWMNDLTRARKQLKELKLKISEEENNRRHRHRSNALPINSRQDKENKHHVSGESQQKPSVEETVQIVMKKLKEKQEILGLPEDVKEMTQKQLRLDKVNMQNCLLHFESLYGRPVNKQERLLMKPLYDRYRSIRQLLSPAAAIPTIEEEGSDEETISKSCEISTRPIADFPFQEFVDNVDHRDEDHEPGFLPPLDEKKETRQPTTSLANLHEASMSELLEHLHETRAEKKKLRKALREFEEQFLKQTGRNVQKEDRIPMAEEYIQYKHTKAKLRLLEVLIAKLDGSKTVLSS
SIO_010081: fam13c
subclass of: SO_0000673
so part of: fam13c
location: join(7338183..7338292,7350037..7350103,7371307..7371454,7378035..7378245,7389870..7390008,7393355..7393436,7395128..7395339,7395460..7395543,7400132..7400227,7401629..7401834,7406196..7406297,7407346..7407478)
location: region:7338183-7407478:1
so has part: feature:7338183-7338292:1:exon
so has part: feature:7350037-7350103:1:exon
so has part: feature:7371307-7371454:1:exon
so has part: feature:7378035-7378245:1:exon
so has part: feature:7389870-7390008:1:exon
so has part: feature:7393355-7393436:1:exon
so has part: feature:7395128-7395339:1:exon
so has part: feature:7395460-7395543:1:exon
so has part: feature:7400132-7400227:1:exon
so has part: feature:7401629-7401834:1:exon
so has part: feature:7406196-7406297:1:exon
so has part: feature:7407346-7407478:1:exon

XP_048464843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7338183-7338292:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7350037-7350103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7371307-7371454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7378035-7378245:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7389870-7390008:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7393355-7393436:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7395128-7395339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7395460-7395543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7400132-7400227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7401629-7401834:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7406196-7406297:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7407346-7407478:1:exon

fam13c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: fam13c
product: family with sequence similarity 13 member C, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048608890.1
SIO_010081: fam13c
subclass of: SO_0000673
so part of: fam13c
location: join(7369808..7369937,7371307..7371454,7371744..7371797,7378035..7378245,7389870..7390008,7393355..7393436,7395128..7395339,7395460..7395543,7400132..7400227,7401629..7401834,7406196..7406297,7407346..7408178)
location: region:7369808-7408178:1
so has part: feature:7369808-7369937:1:exon
so has part: feature:7371307-7371454:1:exon
so has part: feature:7371744-7371797:1:exon
so has part: feature:7378035-7378245:1:exon
so has part: feature:7389870-7390008:1:exon
so has part: feature:7393355-7393436:1:exon
so has part: feature:7395128-7395339:1:exon
so has part: feature:7395460-7395543:1:exon
so has part: feature:7400132-7400227:1:exon
so has part: feature:7401629-7401834:1:exon
so has part: feature:7406196-7406297:1:exon
so has part: feature:7407346-7408178:1:exon

position:7369808:1
position: 7369808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7369808-7369937:1:exon