Rhincodon typus isolate 14 chromosome 13, sRhiTyp1.1, whole genome shotgun sequence.
type: Entry
definition: Rhincodon typus isolate 14 chromosome 13, sRhiTyp1.1, whole genome shotgun sequence.
sequence version: NC_063344.1
sequence date: 2022-06-09
sequence: sequence
division: CON
label: NC_063344.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA842712
dblink: SAMN19519256
keyword: WGS
keyword: RefSeq
source: Rhincodon typus (whale shark)
organism: Rhincodon typus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038810.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 73097125
topology: linear
so has quality: SO_0000987
location: 1..73097125
location: region:1-73097125:1
RO_0002162: 259920

NC_063344
type: RefSeq
SIO_000068: refseq

PRJNA842712
type: BioProject
SIO_000068: bioproject

SAMN19519256
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73097125:1
position: 73097125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-73097125:1:source
so part of: sequence
organism: Rhincodon typus
mol type: genomic DNA
isolate: 14
chromosome: 13
sex: male
tissue type: blood
dev stage: adult
collected by: 2018-05-24

259920
type: Taxonomy
SIO_000068: taxonomy

mecom
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mecom
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(309570..432975)
location: region:309570-432975:-1
so has part: feature:309570-432975:-1:exon
subclass of: SO_0000010

109921280
type: Gene
SIO_000068: ncbigene

position:309570:-1
position: 309570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432975:-1
position: 432975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309570-432975:-1:exon

mecom
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mecom
product: MDS1 and EVI1 complex locus
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604474.1
SIO_010081: mecom
subclass of: SO_0000673
so part of: mecom
location: complement(join(309570..311021,314479..314674,315415..315657,331640..331784,338869..339038,343459..343536,358433..358599,361553..361579,384281..384368,385722..387084,416603..416756,417875..418022,432854..432975))
location: region:309570-432975:-1
so has part: feature:432854-432975:-1:exon
so has part: feature:417875-418022:-1:exon
so has part: feature:416603-416756:-1:exon
so has part: feature:385722-387084:-1:exon
so has part: feature:384281-384368:-1:exon
so has part: feature:361553-361579:-1:exon
so has part: feature:358433-358599:-1:exon
so has part: feature:343459-343536:-1:exon
so has part: feature:338869-339038:-1:exon
so has part: feature:331640-331784:-1:exon
so has part: feature:315415-315657:-1:exon
so has part: feature:314479-314674:-1:exon
so has part: feature:309570-311021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432854-432975:-1:exon

position:432854:-1
position: 432854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:417875-418022:-1:exon

position:417875:-1
position: 417875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418022:-1
position: 418022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:416603-416756:-1:exon

position:416603:-1
position: 416603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416756:-1
position: 416756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:385722-387084:-1:exon

position:385722:-1
position: 385722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387084:-1
position: 387084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:384281-384368:-1:exon

position:384281:-1
position: 384281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384368:-1
position: 384368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:361553-361579:-1:exon

position:361553:-1
position: 361553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361579:-1
position: 361579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:358433-358599:-1:exon

position:358433:-1
position: 358433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358599:-1
position: 358599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:343459-343536:-1:exon

position:343459:-1
position: 343459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343536:-1
position: 343536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:338869-339038:-1:exon

position:338869:-1
position: 338869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339038:-1
position: 339038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:331640-331784:-1:exon

position:331640:-1
position: 331640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331784:-1
position: 331784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:315415-315657:-1:exon

position:315415:-1
position: 315415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315657:-1
position: 315657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:314479-314674:-1:exon

position:314479:-1
position: 314479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314674:-1
position: 314674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:309570-311021:-1:exon

position:311021:-1
position: 311021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mecom
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mecom
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM
translation: MHENVGMLGSKSSAYGCSVCLDEELVVESEDIVVEDEADEFLDRHLLTHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCRKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFTTGGLFGQGITLANATALDKSSLVNMNHSNPGLADYFGANRHPAGLTFPAAPGFPFSFPGLFPSGLYHRPQLIPASSPVKGLSGTEQNTKNPSQLLTSSQMLPSTPDILKTVNRQSSSDEVRPVEVPSDKSSEEKPQGKTSDHSESSDLDDVSTPSGSDLETTSGSDLESDIESDKEKNKENGKSASDKISSPQEAAPINNNKKEFSNHSLFSPPLDEQIAVTGAVNDSIKAIASIAEKYFGSTGLVSMQDKKVGPLPYPSMFPFQFFPAFSQPMYPFPDRDLNAALPLKVEPQSPSELKKLRSGNSESPFDLTTKRKEEKPMPAVTLKPLVSHCASEEQPLDLSMSSRSRACGGMQVEPRKNHVFGERRDSSVGQAKSSDHSLQHAKPTPFFMDPIYRVEKRKLSDPVEALKEKYMKPAPGFLFHPQFRLPDQRVWMSAIENMAEKLEGFSALKPEANDLLRSVPSMFDFRAPPSVIPESLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSEIDSSSAILDDKEDSYFTEIRNFIGNSNYTEHSPGHLEERINGRHSEEEKGPMTSQKTHELDDDEEEEDVELEEEEEEGGCNRVKKTVSDPITFKLDGGKDGIEYDELRKPEQNSKESPSSYKQEDLRLQTKGSLSALEHIRHFTDSLNTRNAEGNQFSEADLTTYSTTHLAEDLKQPLYRKSKSQAYAMMLSLSDKESIHSGSHNAPNMWHSMPRAATEPSTLQSMSHV
SIO_010081: mecom
subclass of: SO_0000673
so part of: mecom
location: complement(join(310887..311021,314479..314674,315415..315657,331640..331784,338869..339038,343459..343536,358433..358599,361553..361579,384281..384368,385722..387084,416603..416756,417875..418022,432854..432975))
location: region:310887-432975:-1
so has part: feature:432854-432975:-1:exon
so has part: feature:417875-418022:-1:exon
so has part: feature:416603-416756:-1:exon
so has part: feature:385722-387084:-1:exon
so has part: feature:384281-384368:-1:exon
so has part: feature:361553-361579:-1:exon
so has part: feature:358433-358599:-1:exon
so has part: feature:343459-343536:-1:exon
so has part: feature:338869-339038:-1:exon
so has part: feature:331640-331784:-1:exon
so has part: feature:315415-315657:-1:exon
so has part: feature:314479-314674:-1:exon
so has part: feature:310887-311021:-1:exon

XP_048460431.1
type: Protein
SIO_000068: ncbiprotein

position:310887:-1
position: 310887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432854-432975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:417875-418022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:416603-416756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385722-387084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384281-384368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361553-361579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:358433-358599:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343459-343536:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338869-339038:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:331640-331784:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315415-315657:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314479-314674:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:310887-311021:-1:exon

LOC125484729
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(563613..573246)
location: region:563613-573246:-1
so has part: feature:563613-573246:-1:exon
subclass of: SO_0000011

125484729
type: Gene
SIO_000068: ncbigene

position:563613:-1
position: 563613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573246:-1
position: 573246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563613-573246:-1:exon

LOC125484729
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484729
product: uncharacterized LOC125484729, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263540.1
SIO_010081: LOC125484729
subclass of: SO_0000673
so part of: LOC125484729
location: complement(join(563613..565996,573156..573246))
location: region:563613-573246:-1
so has part: feature:573156-573246:-1:exon
so has part: feature:563613-565996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573156-573246:-1:exon

position:573156:-1
position: 573156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563613-565996:-1:exon

position:565996:-1
position: 565996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484729
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484729
product: uncharacterized LOC125484729, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263538.1
SIO_010081: LOC125484729
subclass of: SO_0000673
so part of: LOC125484729
location: complement(join(563613..565996,572281..572469))
location: region:563613-572469:-1
so has part: feature:572281-572469:-1:exon
so has part: feature:563613-565996:-1:exon

position:572469:-1
position: 572469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572281-572469:-1:exon

position:572281:-1
position: 572281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563613-565996:-1:exon

LOC125484729
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484729
product: uncharacterized LOC125484729, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263539.1
SIO_010081: LOC125484729
subclass of: SO_0000673
so part of: LOC125484729
location: complement(join(563613..565996,566084..566410))
location: region:563613-566410:-1
so has part: feature:566084-566410:-1:exon
so has part: feature:563613-565996:-1:exon

position:566410:-1
position: 566410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566084-566410:-1:exon

position:566084:-1
position: 566084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563613-565996:-1:exon

LOC125484695
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(687941..1126340)
location: region:687941-1126340:-1
so has part: feature:687941-1126340:-1:exon
subclass of: SO_0000010

125484695
type: Gene
SIO_000068: ncbigene

position:687941:-1
position: 687941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126340:-1
position: 1126340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687941-1126340:-1:exon

LOC125484695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484695
product: histone-lysine N-methyltransferase MECOM-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604475.1
SIO_010081: LOC125484695
subclass of: SO_0000673
so part of: LOC125484695
location: complement(join(687941..688277,782756..783155,1126189..1126340))
location: region:687941-1126340:-1
so has part: feature:1126189-1126340:-1:exon
so has part: feature:782756-783155:-1:exon
so has part: feature:687941-688277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1126189-1126340:-1:exon

position:1126189:-1
position: 1126189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:782756-783155:-1:exon

position:782756:-1
position: 782756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783155:-1
position: 783155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:687941-688277:-1:exon

position:688277:-1
position: 688277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM-like
translation: MRSKGRARKLATSDDSLYDGYSAILPVEEPNADDETGPLSLSAHDLSSPATSNEDFTPKEGSPYKAPIYIPDDIPIPPEFELRESSIPGAGLGIWTKRKLEAGEKLGPYVGEELSNLKDPSHGWEVSTYFNFSVFQMPIHVWSGLCTDPSGHSSTDPSGPSSTDQSGPSSTDPSGPGSKNPNGPSSTDPSGPSSVDRVGPAVWIEWARQCGSSGPGSENRVGLAVWIEWAQKCELKVALSEVSGFCINEAVLMPAYG
SIO_010081: LOC125484695
subclass of: SO_0000673
so part of: LOC125484695
location: complement(join(687941..688277,782756..783155,1126189..1126225))
location: region:687941-1126225:-1
so has part: feature:1126189-1126225:-1:exon
so has part: feature:782756-783155:-1:exon
so has part: feature:687941-688277:-1:exon

XP_048460432.1
type: Protein
SIO_000068: ncbiprotein

position:1126225:-1
position: 1126225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1126189-1126225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782756-783155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687941-688277:-1:exon

LOC109936260
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1201321..1218090
location: region:1201321-1218090:1
so has part: feature:1201321-1218090:1:exon
subclass of: SO_0000010

109936260
type: Gene
SIO_000068: ncbigene

position:1201321:1
position: 1201321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218090:1
position: 1218090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1201321-1218090:1:exon

LOC109936260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936260
product: EEF1A lysine methyltransferase 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048604849.1
SIO_010081: LOC109936260
subclass of: SO_0000673
so part of: LOC109936260
location: join(1201321..1201612,1207376..1207520,1208380..1208599,1215928..1216039,1217189..1218090)
location: region:1201321-1218090:1
so has part: feature:1201321-1201612:1:exon
so has part: feature:1207376-1207520:1:exon
so has part: feature:1208380-1208599:1:exon
so has part: feature:1215928-1216039:1:exon
so has part: feature:1217189-1218090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1201321-1201612:1:exon

position:1201612:1
position: 1201612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1207376-1207520:1:exon

position:1207376:1
position: 1207376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1207520:1
position: 1207520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1208380-1208599:1:exon

position:1208380:1
position: 1208380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208599:1
position: 1208599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1215928-1216039:1:exon

position:1215928:1
position: 1215928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216039:1
position: 1216039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1217189-1218090:1:exon

position:1217189:1
position: 1217189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109936260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936260
product: EEF1A lysine methyltransferase 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048604847.1
SIO_010081: LOC109936260
subclass of: SO_0000673
so part of: LOC109936260
location: join(1201384..1201499,1207376..1207520,1208380..1208599,1215928..1216039,1217189..1218090)
location: region:1201384-1218090:1
so has part: feature:1201384-1201499:1:exon
so has part: feature:1207376-1207520:1:exon
so has part: feature:1208380-1208599:1:exon
so has part: feature:1215928-1216039:1:exon
so has part: feature:1217189-1218090:1:exon

position:1201384:1
position: 1201384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1201384-1201499:1:exon

position:1201499:1
position: 1201499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1207376-1207520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1208380-1208599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215928-1216039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217189-1218090:1:exon

LOC109936260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936260
product: EEF1A lysine methyltransferase 3-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048604850.1
SIO_010081: LOC109936260
subclass of: SO_0000673
so part of: LOC109936260
location: join(1207532..1207730,1208380..1208599,1215928..1216039,1217189..1218090)
location: region:1207532-1218090:1
so has part: feature:1207532-1207730:1:exon
so has part: feature:1208380-1208599:1:exon
so has part: feature:1215928-1216039:1:exon
so has part: feature:1217189-1218090:1:exon

position:1207532:1
position: 1207532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207532-1207730:1:exon

position:1207730:1
position: 1207730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1208380-1208599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215928-1216039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217189-1218090:1:exon

LOC109936260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936260
product: EEF1A lysine methyltransferase 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048604848.1
SIO_010081: LOC109936260
subclass of: SO_0000673
so part of: LOC109936260
location: join(1207532..1207730,1208383..1208599,1215928..1216039,1217189..1218090)
location: region:1207532-1218090:1
so has part: feature:1207532-1207730:1:exon
so has part: feature:1208383-1208599:1:exon
so has part: feature:1215928-1216039:1:exon
so has part: feature:1217189-1218090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207532-1207730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208383-1208599:1:exon

position:1208383:1
position: 1208383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1215928-1216039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217189-1218090:1:exon

LOC109936260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 3-like
translation: METKLQNNSAHSEIEYILERSYQFCGQHLWISQSSNAQIGTSAFVWEAGLALCEYIEEQRIIFNGMKVIELGAGTGILGILAVLLGGNVTITDQPNVLKQIERNVIASISPSCRDRVNIRALSWGHDHTQFPRDYDFILGGEIVYFSKTYPLLIKTLQHLSSERTIIYLSSKMWQDFQINKFYEDILPEHFNCELVYRNEEDDINVYKVTKKSPSSGD
SIO_010081: LOC109936260
subclass of: SO_0000673
so part of: LOC109936260
location: join(1208456..1208599,1215928..1216039,1217189..1217589)
location: region:1208456-1217589:1
so has part: feature:1208456-1208599:1:exon
so has part: feature:1215928-1216039:1:exon
so has part: feature:1217189-1217589:1:exon

XP_048460804.1
type: Protein
SIO_000068: ncbiprotein

position:1208456:1
position: 1208456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217589:1
position: 1217589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208456-1208599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1215928-1216039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1217189-1217589:1:exon

LOC109936260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 3-like
translation: METKLQNNSAHSEIEYILERSYQFCGQHLWISQSSNAQIGTSAFVWEAGLALCEYIEEQRIIFNGMKVIELGAGTGILGILAVLLGGNVTITDQPNVLKQIERNVIASISPSCRDRVNIRALSWGHDHTQFPRDYDFILGGEIVYFSKTYPLLIKTLQHLSSERTIIYLSSKMWQDFQINKFYEDILPEHFNCELVYRNEEDDINVYKVTKKSPSSGD
SIO_010081: LOC109936260
subclass of: SO_0000673
so part of: LOC109936260
location: join(1208456..1208599,1215928..1216039,1217189..1217589)
location: region:1208456-1217589:1
so has part: feature:1208456-1208599:1:exon
so has part: feature:1215928-1216039:1:exon
so has part: feature:1217189-1217589:1:exon

XP_048460805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1208456-1208599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1215928-1216039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1217189-1217589:1:exon

LOC109936260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 3-like
translation: METKLQNNSAHSEIEYILERSYQFCGQHLWISQSSNAQIGTSAFVWEAGLALCEYIEEQRIIFNGMKVIELGAGTGILGILAVLLGGNVTITDQPNVLKQIERNVIASISPSCRDRVNIRALSWGHDHTQFPRDYDFILGGEIVYFSKTYPLLIKTLQHLSSERTIIYLSSKMWQDFQINKFYEDILPEHFNCELVYRNEEDDINVYKVTKKSPSSGD
SIO_010081: LOC109936260
subclass of: SO_0000673
so part of: LOC109936260
location: join(1208456..1208599,1215928..1216039,1217189..1217589)
location: region:1208456-1217589:1
so has part: feature:1208456-1208599:1:exon
so has part: feature:1215928-1216039:1:exon
so has part: feature:1217189-1217589:1:exon

XP_048460806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1208456-1208599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1215928-1216039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1217189-1217589:1:exon

LOC109936260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 3-like
translation: METKLQNNSAHSEIEYILERSYQFCGQHLWISQSSNAQIGTSAFVWEAGLALCEYIEEQRIIFNGMKVIELGAGTGILGILAVLLGGNVTITDQPNVLKQIERNVIASISPSCRDRVNIRALSWGHDHTQFPRDYDFILGGEIVYFSKTYPLLIKTLQHLSSERTIIYLSSKMWQDFQINKFYEDILPEHFNCELVYRNEEDDINVYKVTKKSPSSGD
SIO_010081: LOC109936260
subclass of: SO_0000673
so part of: LOC109936260
location: join(1208456..1208599,1215928..1216039,1217189..1217589)
location: region:1208456-1217589:1
so has part: feature:1208456-1208599:1:exon
so has part: feature:1215928-1216039:1:exon
so has part: feature:1217189-1217589:1:exon

XP_048460807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1208456-1208599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1215928-1216039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1217189-1217589:1:exon

LOC125484668
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1234698..1263015
location: region:1234698-1263015:1
so has part: feature:1234698-1263015:1:exon
subclass of: SO_0000011

125484668
type: Gene
SIO_000068: ncbigene

position:1234698:1
position: 1234698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263015:1
position: 1263015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1234698-1263015:1:exon

LOC125484668
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484668
product: uncharacterized LOC125484668
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007263481.1
SIO_010081: LOC125484668
subclass of: SO_0000673
so part of: LOC125484668
location: join(1234698..1234826,1241292..1242150,1262621..1263015)
location: region:1234698-1263015:1
so has part: feature:1234698-1234826:1:exon
so has part: feature:1241292-1242150:1:exon
so has part: feature:1262621-1263015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1234698-1234826:1:exon

position:1234826:1
position: 1234826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1241292-1242150:1:exon

position:1241292:1
position: 1241292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242150:1
position: 1242150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1262621-1263015:1:exon

position:1262621:1
position: 1262621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109936259
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1237538..1239182)
location: region:1237538-1239182:-1
so has part: feature:1237538-1239182:-1:exon
subclass of: SO_0000010

109936259
type: Gene
SIO_000068: ncbigene

position:1237538:-1
position: 1237538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239182:-1
position: 1239182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237538-1239182:-1:exon

LOC109936259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936259
product: actin-85C-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020534864.2
SIO_010081: LOC109936259
subclass of: SO_0000673
so part of: LOC109936259
location: complement(1237538..1239182)
location: region:1237538-1239182:-1
so has part: feature:1237538-1239182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1237538-1239182:-1:exon

LOC109936259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-85C-like
translation: MGDLQPAIVIDNGSGLIKAGISGDKEPRSIFTNVVGKPRQKALIIGAGQKDFYIGEEAQAKRGVLSIKYPVEHGIVTSWEDMDKVWRYVYDNDLKIKANERPALLTEAPLNPLANREKMCQMLFEAFELPAMYVAIQAVLALYASGRTTGCVMDSGDGVSHTVPIYEGYCLPHAVLRLELGGRDLTEYLVRILTESGVSFVSTAEKEIVRDIKEKLCYVAVDVQAEMCKKPADVEKDYKLPDGQVIKIQNQRFRCPETLFVPANIGIEAPGIDKLCFNTIMKCDIDLRRDLYANVILAGGSSLFPGMDERMLKEMTKMVPTGTPVKVCAPADRKYSVWMGGSILSSLSAFQQMWVLASEYKEVGANIVHRKCF
SIO_010081: LOC109936259
subclass of: SO_0000673
so part of: LOC109936259
location: complement(1237665..1238786)
location: region:1237665-1238786:-1
so has part: feature:1237665-1238786:-1:exon

XP_020390453.1
type: Protein
SIO_000068: ncbiprotein

position:1237665:-1
position: 1237665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238786:-1
position: 1238786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237665-1238786:-1:exon

nyap2a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: nyap2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1440394..1613202
location: region:1440394-1613202:1
so has part: feature:1440394-1613202:1:exon
subclass of: SO_0000010

109924807
type: Gene
SIO_000068: ncbigene

position:1440394:1
position: 1440394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613202:1
position: 1613202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440394-1613202:1:exon

nyap2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nyap2a
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604741.1
SIO_010081: nyap2a
subclass of: SO_0000673
so part of: nyap2a
location: join(1440394..1440411,1449759..1449961,1535594..1535858,1542041..1543193,1584052..1584273,1587310..1587425,1612773..1613202)
location: region:1440394-1613202:1
so has part: feature:1440394-1440411:1:exon
so has part: feature:1449759-1449961:1:exon
so has part: feature:1535594-1535858:1:exon
so has part: feature:1542041-1543193:1:exon
so has part: feature:1584052-1584273:1:exon
so has part: feature:1587310-1587425:1:exon
so has part: feature:1612773-1613202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1440394-1440411:1:exon

position:1440411:1
position: 1440411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1449759-1449961:1:exon

position:1449759:1
position: 1449759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449961:1
position: 1449961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1535594-1535858:1:exon

position:1535594:1
position: 1535594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1535858:1
position: 1535858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1542041-1543193:1:exon

position:1542041:1
position: 1542041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543193:1
position: 1543193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1584052-1584273:1:exon

position:1584052:1
position: 1584052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584273:1
position: 1584273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1587310-1587425:1:exon

position:1587310:1
position: 1587310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587425:1
position: 1587425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1612773-1613202:1:exon

position:1612773:1
position: 1612773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nyap2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nyap2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 isoform X1
translation: MYTSKVMTSKQEDAALNNFLQFIEDKGLRAYDALVIQNASDIARENDRMRSETNLAYLKEKSERRLRQEEAIKRLGAEVGKGSDGTCMGKHFRLGFMTLPAPQDRLPHPCASGFSVRSQSLHSVGGGDDESHTCARKQPPPKPKRDPSTKLSISAETVNVGFVESSGKNDLHNNTLVSLCLASTKPRPHSDEYGKRIPPPKPRRDPNTQLSTSFDETYGTKQGSRKAMAVGSKENSLGQTVSSSQGTDEEEPVYIEMVGNILRDVKRDDDDQSEAVYEEMKYPMFDEVAQDLKWISAANADPHSQCATPTVPDLEITKSSVPSTPKGFFCEIPPPFPNLLPHRPPLLVFPPAPTQCSPTSDESPLTPLEVTKLPVLETSISYIKQASASPSALPAQAVGYQKVEKDLPPSHGICTTGRPSSPPLPSTLYRTPSPHSLQSHFSHSISPSPVTMGRSMTPLGLKRPPPYESIHPTPRCSSAVPQSTSKAPIQEGGKTGNSSTSHGAVHTGARSRTPTSPLEELSCLFTSGRSLLRKSASGRKSKEPMEKPGEDLKGRSFSSELVSKSESKEKGAHGVSGEPIKSQEWDGSPRPPAPVTSRMGRSSVSPTQLAGHSNSETTQSEAKASCKLGRSASTSGVPPPSTAPLRQSSETQQSQVPSLQWFYGDNTILEMIEKKRCLCKEIKSRQKPDKGLCKQDSMPILPSWKKNNVTKNLKPAAPPCTKQQTVLWDTAI
SIO_010081: nyap2a
subclass of: SO_0000673
so part of: nyap2a
location: join(1440394..1440411,1449759..1449961,1535594..1535858,1542041..1543193,1584052..1584273,1587310..1587425,1612773..1612994)
location: region:1440394-1612994:1
so has part: feature:1440394-1440411:1:exon
so has part: feature:1449759-1449961:1:exon
so has part: feature:1535594-1535858:1:exon
so has part: feature:1542041-1543193:1:exon
so has part: feature:1584052-1584273:1:exon
so has part: feature:1587310-1587425:1:exon
so has part: feature:1612773-1612994:1:exon

XP_048460698.1
type: Protein
SIO_000068: ncbiprotein

position:1612994:1
position: 1612994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440394-1440411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1449759-1449961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1535594-1535858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542041-1543193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1584052-1584273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1587310-1587425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1612773-1612994:1:exon

nyap2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nyap2a
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604742.1
SIO_010081: nyap2a
subclass of: SO_0000673
so part of: nyap2a
location: join(1440394..1440411,1449759..1449961,1535594..1535858,1542041..1543193,1584052..1584273,1587310..1587652)
location: region:1440394-1587652:1
so has part: feature:1440394-1440411:1:exon
so has part: feature:1449759-1449961:1:exon
so has part: feature:1535594-1535858:1:exon
so has part: feature:1542041-1543193:1:exon
so has part: feature:1584052-1584273:1:exon
so has part: feature:1587310-1587652:1:exon

position:1587652:1
position: 1587652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440394-1440411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1449759-1449961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1535594-1535858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542041-1543193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1584052-1584273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1587310-1587652:1:exon

nyap2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nyap2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 isoform X2
translation: MYTSKVMTSKQEDAALNNFLQFIEDKGLRAYDALVIQNASDIARENDRMRSETNLAYLKEKSERRLRQEEAIKRLGAEVGKGSDGTCMGKHFRLGFMTLPAPQDRLPHPCASGFSVRSQSLHSVGGGDDESHTCARKQPPPKPKRDPSTKLSISAETVNVGFVESSGKNDLHNNTLVSLCLASTKPRPHSDEYGKRIPPPKPRRDPNTQLSTSFDETYGTKQGSRKAMAVGSKENSLGQTVSSSQGTDEEEPVYIEMVGNILRDVKRDDDDQSEAVYEEMKYPMFDEVAQDLKWISAANADPHSQCATPTVPDLEITKSSVPSTPKGFFCEIPPPFPNLLPHRPPLLVFPPAPTQCSPTSDESPLTPLEVTKLPVLETSISYIKQASASPSALPAQAVGYQKVEKDLPPSHGICTTGRPSSPPLPSTLYRTPSPHSLQSHFSHSISPSPVTMGRSMTPLGLKRPPPYESIHPTPRCSSAVPQSTSKAPIQEGGKTGNSSTSHGAVHTGARSRTPTSPLEELSCLFTSGRSLLRKSASGRKSKEPMEKPGEDLKGRSFSSELVSKSESKEKGAHGVSGEPIKSQEWDGSPRPPAPVTSRMGRSSVSPTQLAGHSNSETTQSEAKASCKLGRSASTSGVPPPSTAPLRQSSETQQSQVPSLANPE
SIO_010081: nyap2a
subclass of: SO_0000673
so part of: nyap2a
location: join(1440394..1440411,1449759..1449961,1535594..1535858,1542041..1543193,1584052..1584273,1587310..1587440)
location: region:1440394-1587440:1
so has part: feature:1440394-1440411:1:exon
so has part: feature:1449759-1449961:1:exon
so has part: feature:1535594-1535858:1:exon
so has part: feature:1542041-1543193:1:exon
so has part: feature:1584052-1584273:1:exon
so has part: feature:1587310-1587440:1:exon

XP_048460699.1
type: Protein
SIO_000068: ncbiprotein

position:1587440:1
position: 1587440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440394-1440411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1449759-1449961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1535594-1535858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542041-1543193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1584052-1584273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1587310-1587440:1:exon

LOC125484750
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1879534..1885301)
location: region:1879534-1885301:-1
so has part: feature:1879534-1885301:-1:exon
subclass of: SO_0000011

125484750
type: Gene
SIO_000068: ncbigene

position:1879534:-1
position: 1879534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885301:-1
position: 1885301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1879534-1885301:-1:exon

LOC125484750
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484750
product: uncharacterized LOC125484750
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263565.1
SIO_010081: LOC125484750
subclass of: SO_0000673
so part of: LOC125484750
location: complement(join(1879534..1880571,1885128..1885301))
location: region:1879534-1885301:-1
so has part: feature:1885128-1885301:-1:exon
so has part: feature:1879534-1880571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1885128-1885301:-1:exon

position:1885128:-1
position: 1885128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1879534-1880571:-1:exon

position:1880571:-1
position: 1880571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484696
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1887746..1888236
location: region:1887746-1888236:1
so has part: feature:1887746-1888236:1:exon

125484696
type: Gene
SIO_000068: ncbigene

position:1887746:1
position: 1887746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1888236:1
position: 1888236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1887746-1888236:1:exon

LOC125484696
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC125484696
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC125484696
subclass of: SO_0000673
so part of: LOC125484696
location: 1887746..1888236
location: region:1887746-1888236:1
so has part: feature:1887746-1888236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1887746-1888236:1:exon

LOC125484748
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2142342..2161417
location: region:2142342-2161417:1
so has part: feature:2142342-2161417:1:exon
subclass of: SO_0000011

125484748
type: Gene
SIO_000068: ncbigene

position:2142342:1
position: 2142342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161417:1
position: 2161417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2142342-2161417:1:exon

LOC125484748
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484748
product: uncharacterized LOC125484748
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263561.1
SIO_010081: LOC125484748
subclass of: SO_0000673
so part of: LOC125484748
location: join(2142342..2142466,2159185..2161417)
location: region:2142342-2161417:1
so has part: feature:2142342-2142466:1:exon
so has part: feature:2159185-2161417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2142342-2142466:1:exon

position:2142466:1
position: 2142466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2159185-2161417:1:exon

position:2159185:1
position: 2159185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109929177
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109929177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2198097..2422035)
location: region:2198097-2422035:-1
so has part: feature:2198097-2422035:-1:exon
subclass of: SO_0000010

109929177
type: Gene
SIO_000068: ncbigene

position:2198097:-1
position: 2198097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2422035:-1
position: 2422035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2198097-2422035:-1:exon

LOC109929177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109929177
product: collagen alpha-4(IV) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604477.1
SIO_010081: LOC109929177
subclass of: SO_0000673
so part of: LOC109929177
location: complement(join(2198097..2199587,2203182..2203468,2205754..2205942,2212094..2212210,2216824..2216958,2219117..2219125,2225396..2225503,2227424..2227582,2229466..2229573,2265332..2265550,2268610..2268717,2274697..2274759,2278515..2278698,2282485..2282591,2283673..2283745,2284908..2285062,2286031..2286123,2288253..2288414,2290176..2290271,2302569..2302688,2303025..2303094,2303958..2304011,2306175..2306219,2310984..2311046,2316741..2316794,2317048..2317119,2321509..2321541,2322193..2322228,2327146..2327208,2330050..2330085,2334028..2334096,2337280..2337396,2337604..2337648,2338207..2338341,2348147..2348224,2420706..2420748,2420894..2421041,2421758..2422035))
location: region:2198097-2422035:-1
so has part: feature:2421758-2422035:-1:exon
so has part: feature:2420894-2421041:-1:exon
so has part: feature:2420706-2420748:-1:exon
so has part: feature:2348147-2348224:-1:exon
so has part: feature:2338207-2338341:-1:exon
so has part: feature:2337604-2337648:-1:exon
so has part: feature:2337280-2337396:-1:exon
so has part: feature:2334028-2334096:-1:exon
so has part: feature:2330050-2330085:-1:exon
so has part: feature:2327146-2327208:-1:exon
so has part: feature:2322193-2322228:-1:exon
so has part: feature:2321509-2321541:-1:exon
so has part: feature:2317048-2317119:-1:exon
so has part: feature:2316741-2316794:-1:exon
so has part: feature:2310984-2311046:-1:exon
so has part: feature:2306175-2306219:-1:exon
so has part: feature:2303958-2304011:-1:exon
so has part: feature:2303025-2303094:-1:exon
so has part: feature:2302569-2302688:-1:exon
so has part: feature:2290176-2290271:-1:exon
so has part: feature:2288253-2288414:-1:exon
so has part: feature:2286031-2286123:-1:exon
so has part: feature:2284908-2285062:-1:exon
so has part: feature:2283673-2283745:-1:exon
so has part: feature:2282485-2282591:-1:exon
so has part: feature:2278515-2278698:-1:exon
so has part: feature:2274697-2274759:-1:exon
so has part: feature:2268610-2268717:-1:exon
so has part: feature:2265332-2265550:-1:exon
so has part: feature:2229466-2229573:-1:exon
so has part: feature:2227424-2227582:-1:exon
so has part: feature:2225396-2225503:-1:exon
so has part: feature:2219117-2219125:-1:exon
so has part: feature:2216824-2216958:-1:exon
so has part: feature:2212094-2212210:-1:exon
so has part: feature:2205754-2205942:-1:exon
so has part: feature:2203182-2203468:-1:exon
so has part: feature:2198097-2199587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2421758-2422035:-1:exon

position:2421758:-1
position: 2421758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2420894-2421041:-1:exon

position:2420894:-1
position: 2420894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2421041:-1
position: 2421041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2420706-2420748:-1:exon

position:2420706:-1
position: 2420706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2420748:-1
position: 2420748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2348147-2348224:-1:exon

position:2348147:-1
position: 2348147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2348224:-1
position: 2348224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2338207-2338341:-1:exon

position:2338207:-1
position: 2338207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2338341:-1
position: 2338341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2337604-2337648:-1:exon

position:2337604:-1
position: 2337604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2337648:-1
position: 2337648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2337280-2337396:-1:exon

position:2337280:-1
position: 2337280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2337396:-1
position: 2337396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2334028-2334096:-1:exon

position:2334028:-1
position: 2334028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2334096:-1
position: 2334096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2330050-2330085:-1:exon

position:2330050:-1
position: 2330050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2330085:-1
position: 2330085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2327146-2327208:-1:exon

position:2327146:-1
position: 2327146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2327208:-1
position: 2327208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2322193-2322228:-1:exon

position:2322193:-1
position: 2322193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2322228:-1
position: 2322228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2321509-2321541:-1:exon

position:2321509:-1
position: 2321509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2321541:-1
position: 2321541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2317048-2317119:-1:exon

position:2317048:-1
position: 2317048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2317119:-1
position: 2317119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2316741-2316794:-1:exon

position:2316741:-1
position: 2316741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2316794:-1
position: 2316794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2310984-2311046:-1:exon

position:2310984:-1
position: 2310984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2311046:-1
position: 2311046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2306175-2306219:-1:exon

position:2306175:-1
position: 2306175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2306219:-1
position: 2306219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2303958-2304011:-1:exon

position:2303958:-1
position: 2303958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2304011:-1
position: 2304011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2303025-2303094:-1:exon

position:2303025:-1
position: 2303025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2303094:-1
position: 2303094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2302569-2302688:-1:exon

position:2302569:-1
position: 2302569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2302688:-1
position: 2302688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2290176-2290271:-1:exon

position:2290176:-1
position: 2290176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2290271:-1
position: 2290271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2288253-2288414:-1:exon

position:2288253:-1
position: 2288253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2288414:-1
position: 2288414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2286031-2286123:-1:exon

position:2286031:-1
position: 2286031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2286123:-1
position: 2286123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2284908-2285062:-1:exon

position:2284908:-1
position: 2284908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2285062:-1
position: 2285062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2283673-2283745:-1:exon

position:2283673:-1
position: 2283673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2283745:-1
position: 2283745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2282485-2282591:-1:exon

position:2282485:-1
position: 2282485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2282591:-1
position: 2282591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2278515-2278698:-1:exon

position:2278515:-1
position: 2278515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2278698:-1
position: 2278698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2274697-2274759:-1:exon

position:2274697:-1
position: 2274697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274759:-1
position: 2274759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2268610-2268717:-1:exon

position:2268610:-1
position: 2268610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2268717:-1
position: 2268717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2265332-2265550:-1:exon

position:2265332:-1
position: 2265332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2265550:-1
position: 2265550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2229466-2229573:-1:exon

position:2229466:-1
position: 2229466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2229573:-1
position: 2229573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2227424-2227582:-1:exon

position:2227424:-1
position: 2227424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227582:-1
position: 2227582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2225396-2225503:-1:exon

position:2225396:-1
position: 2225396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2225503:-1
position: 2225503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2219117-2219125:-1:exon

position:2219117:-1
position: 2219117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219125:-1
position: 2219125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2216824-2216958:-1:exon

position:2216824:-1
position: 2216824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2216958:-1
position: 2216958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2212094-2212210:-1:exon

position:2212094:-1
position: 2212094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212210:-1
position: 2212210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2205754-2205942:-1:exon

position:2205754:-1
position: 2205754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2205942:-1
position: 2205942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2203182-2203468:-1:exon

position:2203182:-1
position: 2203182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2203468:-1
position: 2203468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2198097-2199587:-1:exon

position:2199587:-1
position: 2199587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109929177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109929177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-4(IV) chain-like
translation: MERKKFRRCLPQIDPSSALWSLLLHLFFLRGIQAGHIDYTGPCYGRDCSVCQCFPAKGAQGQPGLLGRHGPPGSPGLQGPQGPPGEKGQKGDRGLPGFPGIKGDGGATGVPGFPGLDGIPGLPGLQGPRGPPGLDGCNGTRGDAGLPGSGGYPGRPGLLGIPGPKGSKGDSITATFPLMGPPGDQGFQGPSGFPGLPGASGLPGFAGPRGPPGFPGPPGLQGLPGDQGIGFPGQKGEKGEQGDPGHIELIEPQEEIFYKGDQGEKGPLGPPGPIGFPGPSVFPTAPGEKGEKGIIGFPGNRGDPGKDGFAGAPGRKGQCGPRGWPGTDGSPGTKGDRGDLGPVGPPGPPLTSCDSQKGYTSDYSLPNSTGGVPITYGLTAAVQTGVAHCHFSKEIRNGDVGRRGFSGSIGERGLPGPPGQQGRPGVTGSGLPGLPGFPGFDGPKGEEGQKGSADCPLPNIIPGPRGLTGSPGPRGLPGVKGSPGFICETTGPPGLPGLKGNQGAPGQKGVHGLKGDPGDCACLPGLPGSPGNPGRPGIPGNPGNPGRKGEQGDRGPSGPAGLPGLPGPSGRQGPPGAKGHKGISSQVAKKGEKGIRGNPGPPGVVGRAGEPGQHGIPGPIGLPGIPGESKCGSRGEKGFQGHAGSPALPGPPGPPGVGYPGLKGQSGPVGDQGFTGEQGSKGQKGQKGDSSCPRVQGQQGPKGLPGPPGPRGFPGNPGRPGNIGFDGFKGLKGEAGLWSYAGAPGFQGLTGDPGPQGPPGPTENGAPGSPGAPGIPGEKGPPGDSYDGPPGNPGPLGRRGSSGAVGDIGNPGPPGRQGVCGPPGPPGQRGPSCDVMSTGPPGDEGPPGFDGPPGPSGFSGDPGLPCLPFAGDPGDLGRSGQTGVQGPPGEQGPCGQHGLPGPPGPQGTMGDQGFPGFPGLDGPPGVPGDQGERGCVGAPGPQGDPGPPGPVIRDVEMDKSNLKGDPGPPGPSGLPGPSGSTGPTGPCGPTGPKGRKGEPGRPGPDGPSAPPGPRGNIGPLGQRGLIGDQGPPGKPGPPGNQGICLPFSAGFLIVVHSQSQEVPTCPQNMPRLWQGYSLIYLKGQEKSHNQDLGLAGSCLPMFSTMPFAYCSIDEVCHYATRNDKSYWLSTTAPIPVMPLVEREVEPYISRCSVCEAPSAAVAIHSQDQTIPSCPSGWLSLWTGYSFLMHTGAGATGGGQTLASPGSCLEDFRSTPFIECQGARGTCHYFTDKYSFWLTTVQPSLQFKLNTPSETLQVEQLQRQRVSRCQVCLKQ
SIO_010081: LOC109929177
subclass of: SO_0000673
so part of: LOC109929177
location: complement(join(2199327..2199587,2203182..2203468,2205754..2205942,2212094..2212210,2216824..2216958,2219117..2219125,2225396..2225503,2227424..2227582,2229466..2229573,2265332..2265550,2268610..2268717,2274697..2274759,2278515..2278698,2282485..2282591,2283673..2283745,2284908..2285062,2286031..2286123,2288253..2288414,2290176..2290271,2302569..2302688,2303025..2303094,2303958..2304011,2306175..2306219,2310984..2311046,2316741..2316794,2317048..2317119,2321509..2321541,2322193..2322228,2327146..2327208,2330050..2330085,2334028..2334096,2337280..2337396,2337604..2337648,2338207..2338341,2348147..2348224,2420706..2420748,2420894..2420952))
location: region:2199327-2420952:-1
so has part: feature:2420894-2420952:-1:exon
so has part: feature:2420706-2420748:-1:exon
so has part: feature:2348147-2348224:-1:exon
so has part: feature:2338207-2338341:-1:exon
so has part: feature:2337604-2337648:-1:exon
so has part: feature:2337280-2337396:-1:exon
so has part: feature:2334028-2334096:-1:exon
so has part: feature:2330050-2330085:-1:exon
so has part: feature:2327146-2327208:-1:exon
so has part: feature:2322193-2322228:-1:exon
so has part: feature:2321509-2321541:-1:exon
so has part: feature:2317048-2317119:-1:exon
so has part: feature:2316741-2316794:-1:exon
so has part: feature:2310984-2311046:-1:exon
so has part: feature:2306175-2306219:-1:exon
so has part: feature:2303958-2304011:-1:exon
so has part: feature:2303025-2303094:-1:exon
so has part: feature:2302569-2302688:-1:exon
so has part: feature:2290176-2290271:-1:exon
so has part: feature:2288253-2288414:-1:exon
so has part: feature:2286031-2286123:-1:exon
so has part: feature:2284908-2285062:-1:exon
so has part: feature:2283673-2283745:-1:exon
so has part: feature:2282485-2282591:-1:exon
so has part: feature:2278515-2278698:-1:exon
so has part: feature:2274697-2274759:-1:exon
so has part: feature:2268610-2268717:-1:exon
so has part: feature:2265332-2265550:-1:exon
so has part: feature:2229466-2229573:-1:exon
so has part: feature:2227424-2227582:-1:exon
so has part: feature:2225396-2225503:-1:exon
so has part: feature:2219117-2219125:-1:exon
so has part: feature:2216824-2216958:-1:exon
so has part: feature:2212094-2212210:-1:exon
so has part: feature:2205754-2205942:-1:exon
so has part: feature:2203182-2203468:-1:exon
so has part: feature:2199327-2199587:-1:exon

XP_048460434.1
type: Protein
SIO_000068: ncbiprotein

position:2199327:-1
position: 2199327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2420952:-1
position: 2420952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2420894-2420952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2420706-2420748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2348147-2348224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2338207-2338341:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2337604-2337648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2337280-2337396:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2334028-2334096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2330050-2330085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2327146-2327208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2322193-2322228:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2321509-2321541:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2317048-2317119:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2316741-2316794:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2310984-2311046:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2306175-2306219:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2303958-2304011:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2303025-2303094:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2302569-2302688:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2290176-2290271:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2288253-2288414:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2286031-2286123:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2284908-2285062:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2283673-2283745:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2282485-2282591:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2278515-2278698:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2274697-2274759:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2268610-2268717:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2265332-2265550:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2229466-2229573:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2227424-2227582:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2225396-2225503:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2219117-2219125:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2216824-2216958:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2212094-2212210:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2205754-2205942:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2203182-2203468:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2199327-2199587:-1:exon

LOC109918187
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109918187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2421829..2619142
location: region:2421829-2619142:1
so has part: feature:2421829-2619142:1:exon
subclass of: SO_0000010

109918187
type: Gene
SIO_000068: ncbigene

position:2421829:1
position: 2421829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2619142:1
position: 2619142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2421829-2619142:1:exon

LOC109918187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918187
product: collagen alpha-1(IV) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604479.1
SIO_010081: LOC109918187
subclass of: SO_0000673
so part of: LOC109918187
location: join(2421829..2422262,2492408..2492464,2497646..2497735,2500324..2500368,2501196..2501240,2506194..2506256,2506439..2506492,2507592..2507618,2508577..2508654,2553014..2553202,2562700..2562868,2565046..2565138,2569588..2569692,2573437..2573534,2574780..2574930,2575464..2575577,2578545..2578709,2584091..2584180,2586218..2586352,2587566..2587664,2591238..2591327,2591946..2592085,2593882..2594008,2595344..2595424,2605025..2605123,2605654..2605704,2606619..2606804,2608789..2608922,2613405..2613474,2616436..2616507,2617091..2617216,2619036..2619142)
location: region:2421829-2619142:1
so has part: feature:2421829-2422262:1:exon
so has part: feature:2492408-2492464:1:exon
so has part: feature:2497646-2497735:1:exon
so has part: feature:2500324-2500368:1:exon
so has part: feature:2501196-2501240:1:exon
so has part: feature:2506194-2506256:1:exon
so has part: feature:2506439-2506492:1:exon
so has part: feature:2507592-2507618:1:exon
so has part: feature:2508577-2508654:1:exon
so has part: feature:2553014-2553202:1:exon
so has part: feature:2562700-2562868:1:exon
so has part: feature:2565046-2565138:1:exon
so has part: feature:2569588-2569692:1:exon
so has part: feature:2573437-2573534:1:exon
so has part: feature:2574780-2574930:1:exon
so has part: feature:2575464-2575577:1:exon
so has part: feature:2578545-2578709:1:exon
so has part: feature:2584091-2584180:1:exon
so has part: feature:2586218-2586352:1:exon
so has part: feature:2587566-2587664:1:exon
so has part: feature:2591238-2591327:1:exon
so has part: feature:2591946-2592085:1:exon
so has part: feature:2593882-2594008:1:exon
so has part: feature:2595344-2595424:1:exon
so has part: feature:2605025-2605123:1:exon
so has part: feature:2605654-2605704:1:exon
so has part: feature:2606619-2606804:1:exon
so has part: feature:2608789-2608922:1:exon
so has part: feature:2613405-2613474:1:exon
so has part: feature:2616436-2616507:1:exon
so has part: feature:2617091-2617216:1:exon
so has part: feature:2619036-2619142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2421829-2422262:1:exon

position:2422262:1
position: 2422262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2492408-2492464:1:exon

position:2492408:1
position: 2492408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492464:1
position: 2492464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2497646-2497735:1:exon

position:2497646:1
position: 2497646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2497735:1
position: 2497735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2500324-2500368:1:exon

position:2500324:1
position: 2500324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2500368:1
position: 2500368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2501196-2501240:1:exon

position:2501196:1
position: 2501196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2501240:1
position: 2501240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2506194-2506256:1:exon

position:2506194:1
position: 2506194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506256:1
position: 2506256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2506439-2506492:1:exon

position:2506439:1
position: 2506439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506492:1
position: 2506492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2507592-2507618:1:exon

position:2507592:1
position: 2507592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2507618:1
position: 2507618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2508577-2508654:1:exon

position:2508577:1
position: 2508577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508654:1
position: 2508654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2553014-2553202:1:exon

position:2553014:1
position: 2553014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2553202:1
position: 2553202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2562700-2562868:1:exon

position:2562700:1
position: 2562700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2562868:1
position: 2562868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2565046-2565138:1:exon

position:2565046:1
position: 2565046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2565138:1
position: 2565138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2569588-2569692:1:exon

position:2569588:1
position: 2569588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2569692:1
position: 2569692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2573437-2573534:1:exon

position:2573437:1
position: 2573437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2573534:1
position: 2573534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2574780-2574930:1:exon

position:2574780:1
position: 2574780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2574930:1
position: 2574930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2575464-2575577:1:exon

position:2575464:1
position: 2575464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2575577:1
position: 2575577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2578545-2578709:1:exon

position:2578545:1
position: 2578545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2578709:1
position: 2578709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2584091-2584180:1:exon

position:2584091:1
position: 2584091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2584180:1
position: 2584180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2586218-2586352:1:exon

position:2586218:1
position: 2586218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2586352:1
position: 2586352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2587566-2587664:1:exon

position:2587566:1
position: 2587566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2587664:1
position: 2587664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2591238-2591327:1:exon

position:2591238:1
position: 2591238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2591327:1
position: 2591327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2591946-2592085:1:exon

position:2591946:1
position: 2591946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2592085:1
position: 2592085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2593882-2594008:1:exon

position:2593882:1
position: 2593882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2594008:1
position: 2594008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2595344-2595424:1:exon

position:2595344:1
position: 2595344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2595424:1
position: 2595424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2605025-2605123:1:exon

position:2605025:1
position: 2605025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2605123:1
position: 2605123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2605654-2605704:1:exon

position:2605654:1
position: 2605654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2605704:1
position: 2605704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2606619-2606804:1:exon

position:2606619:1
position: 2606619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2606804:1
position: 2606804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2608789-2608922:1:exon

position:2608789:1
position: 2608789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2608922:1
position: 2608922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2613405-2613474:1:exon

position:2613405:1
position: 2613405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2613474:1
position: 2613474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2616436-2616507:1:exon

position:2616436:1
position: 2616436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616507:1
position: 2616507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2617091-2617216:1:exon

position:2617091:1
position: 2617091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2617216:1
position: 2617216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2619036-2619142:1:exon

position:2619036:1
position: 2619036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109918187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(IV) chain-like
translation: MPALRCILVILSTATLAETACTCSGKSKCHCDGVKGNKGERGFPGPQGPPGIPGFPGIEGPRGPEGPKGNPGFSGPPGMKGLRGPSGLPGHPGNPAVPGIPGKDGPQGPKGIPGCNGTKGDPGFPGIPGSEGLSGLHGHPGLPGQKGEPAQTVSLYPGDKGSRGPPGQPGPPGSPGFPGFGGPPGLNGDPGIRGGQGSKGDKGDSGFLGKTGRQGKDGIPGQPGPQGPRGIKGDPTPFASNGDRGPQGVPGNAGIPGPMGPPGPPGFGPPGRQGLKGNRGVPGFRGIDGVPGEKGEQNNESAVPGPTGLRGETGATGPAGFPGNPGPPGRDGSPGPPGEKGETGHSEKGSTGPPGLKGNPGPPGVLGPLGTPGRPGAPGTPGLPGVTGPKGDGRFGLPGNHGPPGPAGNVGPPGEKGNSGPPGLPGEEGRPGRSGPQGPRGDLGSPGIQGPTGPRGQPGKGIPGPEGSEGPPGPPGLQGITTRGPTGDPGIPGVGIPGLPGTPGSVGTPGCSGPPGPRGSLGNPGRPGVPGRSGPKGEPGVMGEPGNPGLTGERGCQGLKGDKGSEGQSGPKGNEGAIGLIGLKGEKGIKPVTHTIIVKGVMGDPGPQGLQGRTGPKGETGSWGEAGHKGKDGAPGPLGPAGPPGDPGLPGNPGNPGCDGVLGSTGPMGLPGDKGEKGFAGPTGSSALPGSDGIPGTKGEKGEPSRLVYGNPGPPGEKGNQGPTAPKELPGTPGSRGEPGTDGCPGTPGEKGDQGKSGFPGPAGSKGGKGLDGKRGLPGSQGVPGTPGMPGRHGPPGLTGAKGRQGLDGIPGPHGLKGDPGLPGRGYKGQPGPCGQSGPKGDTGPPGDESEGGPPGPRGDIGPPGPPGLPGESGPPGPAGMSIQGPKGNRGPQGTPGPAGPRGLKGLFGLPGPDCLKGNKGSSGLPGFQGNPGDRGEPGAKGQPGIPGTSAQGPKGERGSTGTPGFPGLQGDKGVKGQTGDAGLPGLPGQPGPEGLPSVISTIPVKGDSGLPGPPGPEGRSGTPGSPGPPGCIGSQGPTGSLGRNGPPGGMGRPGQKGSPGFPGQQGK
SIO_010081: LOC109918187
subclass of: SO_0000673
so part of: LOC109918187
location: join(2422206..2422262,2492408..2492464,2497646..2497735,2500324..2500368,2501196..2501240,2506194..2506256,2506439..2506492,2507592..2507618,2508577..2508654,2553014..2553202,2562700..2562868,2565046..2565138,2569588..2569692,2573437..2573534,2574780..2574930,2575464..2575577,2578545..2578709,2584091..2584180,2586218..2586352,2587566..2587664,2591238..2591327,2591946..2592085,2593882..2594008,2595344..2595424,2605025..2605123,2605654..2605704,2606619..2606804,2608789..2608922,2613405..2613474,2616436..2616507,2617091..2617216,2619036..2619142)
location: region:2422206-2619142:1
so has part: feature:2422206-2422262:1:exon
so has part: feature:2492408-2492464:1:exon
so has part: feature:2497646-2497735:1:exon
so has part: feature:2500324-2500368:1:exon
so has part: feature:2501196-2501240:1:exon
so has part: feature:2506194-2506256:1:exon
so has part: feature:2506439-2506492:1:exon
so has part: feature:2507592-2507618:1:exon
so has part: feature:2508577-2508654:1:exon
so has part: feature:2553014-2553202:1:exon
so has part: feature:2562700-2562868:1:exon
so has part: feature:2565046-2565138:1:exon
so has part: feature:2569588-2569692:1:exon
so has part: feature:2573437-2573534:1:exon
so has part: feature:2574780-2574930:1:exon
so has part: feature:2575464-2575577:1:exon
so has part: feature:2578545-2578709:1:exon
so has part: feature:2584091-2584180:1:exon
so has part: feature:2586218-2586352:1:exon
so has part: feature:2587566-2587664:1:exon
so has part: feature:2591238-2591327:1:exon
so has part: feature:2591946-2592085:1:exon
so has part: feature:2593882-2594008:1:exon
so has part: feature:2595344-2595424:1:exon
so has part: feature:2605025-2605123:1:exon
so has part: feature:2605654-2605704:1:exon
so has part: feature:2606619-2606804:1:exon
so has part: feature:2608789-2608922:1:exon
so has part: feature:2613405-2613474:1:exon
so has part: feature:2616436-2616507:1:exon
so has part: feature:2617091-2617216:1:exon
so has part: feature:2619036-2619142:1:exon

XP_048460436.1
type: Protein
SIO_000068: ncbiprotein

position:2422206:1
position: 2422206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2422206-2422262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2492408-2492464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2497646-2497735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2500324-2500368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2501196-2501240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2506194-2506256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2506439-2506492:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2507592-2507618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2508577-2508654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2553014-2553202:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2562700-2562868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2565046-2565138:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2569588-2569692:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2573437-2573534:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2574780-2574930:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2575464-2575577:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2578545-2578709:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2584091-2584180:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2586218-2586352:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2587566-2587664:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2591238-2591327:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2591946-2592085:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2593882-2594008:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2595344-2595424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2605025-2605123:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2605654-2605704:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2606619-2606804:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2608789-2608922:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2613405-2613474:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2616436-2616507:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2617091-2617216:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2619036-2619142:1:exon

LOC125484762
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2628540..2645197
location: region:2628540-2645197:1
so has part: feature:2628540-2645197:1:exon
subclass of: SO_0000011

125484762
type: Gene
SIO_000068: ncbigene

position:2628540:1
position: 2628540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2645197:1
position: 2645197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2628540-2645197:1:exon

LOC125484762
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484762
product: uncharacterized LOC125484762
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007263584.1
SIO_010081: LOC125484762
subclass of: SO_0000673
so part of: LOC125484762
location: join(2628540..2628651,2630366..2630538,2644434..2645197)
location: region:2628540-2645197:1
so has part: feature:2628540-2628651:1:exon
so has part: feature:2630366-2630538:1:exon
so has part: feature:2644434-2645197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2628540-2628651:1:exon

position:2628651:1
position: 2628651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2630366-2630538:1:exon

position:2630366:1
position: 2630366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2630538:1
position: 2630538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2644434-2645197:1:exon

position:2644434:1
position: 2644434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mffa
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mffa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2665991..2684790
location: region:2665991-2684790:1
so has part: feature:2665991-2684790:1:exon
subclass of: SO_0000010

109918188
type: Gene
SIO_000068: ncbigene

position:2665991:1
position: 2665991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2684790:1
position: 2684790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665991-2684790:1:exon

mffa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mffa
product: mitochondrial fission factor a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020518085.2
SIO_010081: mffa
subclass of: SO_0000673
so part of: mffa
location: join(2665991..2666170,2668059..2668147,2672476..2672646,2679321..2679383,2682941..2683025,2683374..2684790)
location: region:2665991-2684790:1
so has part: feature:2665991-2666170:1:exon
so has part: feature:2668059-2668147:1:exon
so has part: feature:2672476-2672646:1:exon
so has part: feature:2679321-2679383:1:exon
so has part: feature:2682941-2683025:1:exon
so has part: feature:2683374-2684790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2665991-2666170:1:exon

position:2666170:1
position: 2666170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2668059-2668147:1:exon

position:2668059:1
position: 2668059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2668147:1
position: 2668147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2672476-2672646:1:exon

position:2672476:1
position: 2672476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2672646:1
position: 2672646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2679321-2679383:1:exon

position:2679321:1
position: 2679321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2679383:1
position: 2679383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2682941-2683025:1:exon

position:2682941:1
position: 2682941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683025:1
position: 2683025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2683374-2684790:1:exon

position:2683374:1
position: 2683374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mffa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mffa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission factor homolog B
translation: MLVSVLGDNDNTRPRDLDFMTSTPTEPLALKTPPRVLTLSEQPLDFLDPERPVASTQSDEFRSHSRVRRERSMSENATRQNGQLVRTESIVTPTPQPQLEPRLYPPLISSEDGPNAYSPHGILSIIHSTTRRAYQQVLDMLDENRRRSVLHGGSTCATSSNTQLDGSRYSISNCDSAVEGTPDDLAVVDSVSLRRQIIKLNRRLQLLEEENRERTRREIIIYSITVGFWLINSWLWLRR
SIO_010081: mffa
subclass of: SO_0000673
so part of: mffa
location: join(2665991..2666170,2668059..2668147,2672476..2672646,2679321..2679383,2682941..2683025,2683374..2683505)
location: region:2665991-2683505:1
so has part: feature:2665991-2666170:1:exon
so has part: feature:2668059-2668147:1:exon
so has part: feature:2672476-2672646:1:exon
so has part: feature:2679321-2679383:1:exon
so has part: feature:2682941-2683025:1:exon
so has part: feature:2683374-2683505:1:exon

XP_020373674.2
type: Protein
SIO_000068: ncbiprotein

position:2683505:1
position: 2683505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665991-2666170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2668059-2668147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2672476-2672646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2679321-2679383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2682941-2683025:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2683374-2683505:1:exon

LOC125484763
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2668379..2670934)
location: region:2668379-2670934:-1
so has part: feature:2668379-2670934:-1:exon
subclass of: SO_0000011

125484763
type: Gene
SIO_000068: ncbigene

position:2668379:-1
position: 2668379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2670934:-1
position: 2670934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2668379-2670934:-1:exon

LOC125484763
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484763
product: uncharacterized LOC125484763
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263586.1
SIO_010081: LOC125484763
subclass of: SO_0000673
so part of: LOC125484763
location: complement(join(2668379..2668451,2670423..2670934))
location: region:2668379-2670934:-1
so has part: feature:2670423-2670934:-1:exon
so has part: feature:2668379-2668451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2670423-2670934:-1:exon

position:2670423:-1
position: 2670423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2668379-2668451:-1:exon

position:2668451:-1
position: 2668451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mrpl44
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mrpl44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2693939..2847580
location: region:2693939-2847580:1
so has part: feature:2693939-2847580:1:exon
subclass of: SO_0000010

109918384
type: Gene
SIO_000068: ncbigene

position:2693939:1
position: 2693939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847580:1
position: 2847580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2693939-2847580:1:exon

mrpl44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mrpl44
product: mitochondrial ribosomal protein L44
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020518305.2
SIO_010081: mrpl44
subclass of: SO_0000673
so part of: mrpl44
location: join(2693939..2694176,2840085..2840553,2842889..2843067,2847298..2847580)
location: region:2693939-2847580:1
so has part: feature:2693939-2694176:1:exon
so has part: feature:2840085-2840553:1:exon
so has part: feature:2842889-2843067:1:exon
so has part: feature:2847298-2847580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2693939-2694176:1:exon

position:2694176:1
position: 2694176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2840085-2840553:1:exon

position:2840085:1
position: 2840085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2840553:1
position: 2840553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2842889-2843067:1:exon

position:2842889:1
position: 2842889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843067:1
position: 2843067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2847298-2847580:1:exon

position:2847298:1
position: 2847298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mrpl44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mrpl44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L44, mitochondrial
translation: MRSLSSVMAALVLCRRVVNPFGQRFPLSQTISFVQTREKKRWMKSYMLLMERKKKLEGPPPPKPRSQQPNWDYHAEVEAFSHRLNENFNLDLLKTAFVNPCYVTSEEARRRELRLEREEITLNLKDNQQLFEKGLLLTSTYLQDCFHSTYPNLPADGVKALTSHLTGSQTVCNVARNLAVEDLTLSAEFPVPQEILRKTFFALIGALLETSGPERATLFVRDFLITQLIGKDLFEMWPVINPMGLLVEELKNRKMFLPESRLTRQSGASTVLPVYFVGLYSDKQLIAEGPGETVLSAEEEAARVALRKIYGYTENRRPWDYSNPTKQPTAAKALSN
SIO_010081: mrpl44
subclass of: SO_0000673
so part of: mrpl44
location: join(2693983..2694176,2840085..2840553,2842889..2843067,2847298..2847466)
location: region:2693983-2847466:1
so has part: feature:2693983-2694176:1:exon
so has part: feature:2840085-2840553:1:exon
so has part: feature:2842889-2843067:1:exon
so has part: feature:2847298-2847466:1:exon

XP_020373894.1
type: Protein
SIO_000068: ncbiprotein

position:2693983:1
position: 2693983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847466:1
position: 2847466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2693983-2694176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2840085-2840553:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842889-2843067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2847298-2847466:1:exon

LOC125481048
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125481048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2727135..2752612
location: region:2727135-2752612:1
so has part: feature:2727135-2752612:1:exon
subclass of: SO_0000010

125481048
type: Gene
SIO_000068: ncbigene

position:2727135:1
position: 2727135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2752612:1
position: 2752612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2727135-2752612:1:exon

LOC125481048
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125481048
product: arf-GAP domain and FG repeat-containing protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048604845.1
SIO_010081: LOC125481048
subclass of: SO_0000673
so part of: LOC125481048
location: join(2727135..2727396,2733929..2734022,2740099..2740214,2740912..2740964,2749047..2749194)
location: region:2727135-2749194:1
so has part: feature:2727135-2727396:1:exon
so has part: feature:2733929-2734022:1:exon
so has part: feature:2740099-2740214:1:exon
so has part: feature:2740912-2740964:1:exon
so has part: feature:2749047-2749194:1:exon

position:2749194:1
position: 2749194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2727135-2727396:1:exon

position:2727396:1
position: 2727396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2733929-2734022:1:exon

position:2733929:1
position: 2733929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734022:1
position: 2734022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2740099-2740214:1:exon

position:2740099:1
position: 2740099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2740214:1
position: 2740214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2740912-2740964:1:exon

position:2740912:1
position: 2740912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2740964:1
position: 2740964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2749047-2749194:1:exon

position:2749047:1
position: 2749047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125481048
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125481048
product: arf-GAP domain and FG repeat-containing protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_048604844.1
SIO_010081: LOC125481048
subclass of: SO_0000673
so part of: LOC125481048
location: join(2727137..2727396,2733929..2734022,2740099..2740214,2749047..2749200,2751621..2752612)
location: region:2727137-2752612:1
so has part: feature:2727137-2727396:1:exon
so has part: feature:2733929-2734022:1:exon
so has part: feature:2740099-2740214:1:exon
so has part: feature:2749047-2749200:1:exon
so has part: feature:2751621-2752612:1:exon

position:2727137:1
position: 2727137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2727137-2727396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2733929-2734022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2740099-2740214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2749047-2749200:1:exon

position:2749200:1
position: 2749200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2751621-2752612:1:exon

position:2751621:1
position: 2751621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125481048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125481048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 1-like isoform X1
translation: MAAKRKQEEKHLKLLRDMTTLQHNRKCFDCDQRGPTYVNMTIGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLYDERSSIYPDFRDPQKVKDFLQEKYEKKRWFVPAERAWAVAAAHASISGSSASSASSTPEVKPGKSLLYETTHLSKGTPTQSPAVSRSQGSQQEKKVASFDLLTDLGGDIFATPQSAPPYFANFTHFNSHSGKMVFTVSLCSICIVYTY
SIO_010081: LOC125481048
subclass of: SO_0000673
so part of: LOC125481048
location: join(2727236..2727396,2733929..2734022,2740099..2740214,2749047..2749200,2751621..2751827)
location: region:2727236-2751827:1
so has part: feature:2727236-2727396:1:exon
so has part: feature:2733929-2734022:1:exon
so has part: feature:2740099-2740214:1:exon
so has part: feature:2749047-2749200:1:exon
so has part: feature:2751621-2751827:1:exon

XP_048460801.1
type: Protein
SIO_000068: ncbiprotein

position:2727236:1
position: 2727236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2751827:1
position: 2751827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2727236-2727396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2733929-2734022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2740099-2740214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2749047-2749200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2751621-2751827:1:exon

LOC125481048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125481048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 1-like isoform X2
translation: MAAKRKQEEKHLKLLRDMTTLQHNRKCFDCDQRGPTYVNMTIGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLYDERSSIYPDFRDPQKVKDFLQEKYEKKRWTSKTDDQKYLGFQHISTGLCQLNGPGQ
SIO_010081: LOC125481048
subclass of: SO_0000673
so part of: LOC125481048
location: join(2727236..2727396,2733929..2734022,2740099..2740214,2740912..2740964,2749047..2749078)
location: region:2727236-2749078:1
so has part: feature:2727236-2727396:1:exon
so has part: feature:2733929-2734022:1:exon
so has part: feature:2740099-2740214:1:exon
so has part: feature:2740912-2740964:1:exon
so has part: feature:2749047-2749078:1:exon

XP_048460802.1
type: Protein
SIO_000068: ncbiprotein

position:2749078:1
position: 2749078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2727236-2727396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2733929-2734022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2740099-2740214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2740912-2740964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2749047-2749078:1:exon

rhbdd1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: rhbdd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2758498..2783038
location: region:2758498-2783038:1
so has part: feature:2758498-2783038:1:exon
subclass of: SO_0000010

109917744
type: Gene
SIO_000068: ncbigene

position:2758498:1
position: 2758498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2783038:1
position: 2783038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2758498-2783038:1:exon

rhbdd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rhbdd1
product: rhomboid domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048604846.1
SIO_010081: rhbdd1
subclass of: SO_0000673
so part of: rhbdd1
location: join(2758498..2758621,2766218..2766727,2768357..2768489,2778086..2778174,2782983..2783038)
location: region:2758498-2783038:1
so has part: feature:2758498-2758621:1:exon
so has part: feature:2766218-2766727:1:exon
so has part: feature:2768357-2768489:1:exon
so has part: feature:2778086-2778174:1:exon
so has part: feature:2782983-2783038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2758498-2758621:1:exon

position:2758621:1
position: 2758621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2766218-2766727:1:exon

position:2766218:1
position: 2766218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766727:1
position: 2766727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2768357-2768489:1:exon

position:2768357:1
position: 2768357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768489:1
position: 2768489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2778086-2778174:1:exon

position:2778086:1
position: 2778086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2778174:1
position: 2778174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2782983-2783038:1:exon

position:2782983:1
position: 2782983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rhbdd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rhbdd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid-related protein 4
translation: MHSRHRGGNLGLLLLLSQIIQVGFDNIPTVTLITMALNIYLFLSPVKPLLNVCISVHETWNRKDWKRLFYSPFHHADDWHLYFNMVSMLYKGIKLEPRLGTKWFAYMLSVFSVMTGVVYLVLEILLEELMEDHSYKMQCAVGFSGVLFALKVVNNHYNPGGISYVLGFPVQKQYACWGELIAIHLIAPGTSFVGHLSGILVGLLYTKGPLKNLMEACADGVFSNTSRRHIRFNNQG
SIO_010081: rhbdd1
subclass of: SO_0000673
so part of: rhbdd1
location: join(2766295..2766727,2768357..2768489,2778086..2778174,2782983..2783038)
location: region:2766295-2783038:1
so has part: feature:2766295-2766727:1:exon
so has part: feature:2768357-2768489:1:exon
so has part: feature:2778086-2778174:1:exon
so has part: feature:2782983-2783038:1:exon

XP_048460803.1
type: Protein
SIO_000068: ncbiprotein

position:2766295:1
position: 2766295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2766295-2766727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2768357-2768489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2778086-2778174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2782983-2783038:1:exon

LOC109925310
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925310
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2793737..2799384
location: region:2793737-2799384:1
so has part: feature:2793737-2799384:1:exon
subclass of: SO_0000011

109925310
type: Gene
SIO_000068: ncbigene

position:2793737:1
position: 2793737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2799384:1
position: 2799384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2793737-2799384:1:exon

LOC109925310
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109925310
product: uncharacterized LOC109925310
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007263585.1
SIO_010081: LOC109925310
subclass of: SO_0000673
so part of: LOC109925310
location: join(2793737..2793776,2793877..2793918,2794190..2794261,2799330..2799384)
location: region:2793737-2799384:1
so has part: feature:2793737-2793776:1:exon
so has part: feature:2793877-2793918:1:exon
so has part: feature:2794190-2794261:1:exon
so has part: feature:2799330-2799384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2793737-2793776:1:exon

position:2793776:1
position: 2793776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2793877-2793918:1:exon

position:2793877:1
position: 2793877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2793918:1
position: 2793918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2794190-2794261:1:exon

position:2794190:1
position: 2794190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2794261:1
position: 2794261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2799330-2799384:1:exon

position:2799330:1
position: 2799330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109918190
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109918190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2808306..2822697
location: region:2808306-2822697:1
so has part: feature:2808306-2822697:1:exon
subclass of: SO_0000011

109918190
type: Gene
SIO_000068: ncbigene

position:2808306:1
position: 2808306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822697:1
position: 2822697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2808306-2822697:1:exon

LOC109918190
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109918190
product: uncharacterized LOC109918190
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007263583.1
SIO_010081: LOC109918190
subclass of: SO_0000673
so part of: LOC109918190
location: join(2808306..2808393,2811090..2811125,2811509..2811664,2812560..2812652,2815202..2815285,2822626..2822697)
location: region:2808306-2822697:1
so has part: feature:2808306-2808393:1:exon
so has part: feature:2811090-2811125:1:exon
so has part: feature:2811509-2811664:1:exon
so has part: feature:2812560-2812652:1:exon
so has part: feature:2815202-2815285:1:exon
so has part: feature:2822626-2822697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2808306-2808393:1:exon

position:2808393:1
position: 2808393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2811090-2811125:1:exon

position:2811090:1
position: 2811090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2811125:1
position: 2811125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2811509-2811664:1:exon

position:2811509:1
position: 2811509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2811664:1
position: 2811664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2812560-2812652:1:exon

position:2812560:1
position: 2812560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2812652:1
position: 2812652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2815202-2815285:1:exon

position:2815202:1
position: 2815202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2815285:1
position: 2815285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2822626-2822697:1:exon

position:2822626:1
position: 2822626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484761
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484761
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2855411..2866539
location: region:2855411-2866539:1
so has part: feature:2855411-2866539:1:exon
subclass of: SO_0000011

125484761
type: Gene
SIO_000068: ncbigene

position:2855411:1
position: 2855411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2866539:1
position: 2866539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2855411-2866539:1:exon

LOC125484761
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484761
product: uncharacterized LOC125484761
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263582.1
SIO_010081: LOC125484761
subclass of: SO_0000673
so part of: LOC125484761
location: join(2855411..2856658,2864304..2864459,2864547..2864641,2865870..2866539)
location: region:2855411-2866539:1
so has part: feature:2855411-2856658:1:exon
so has part: feature:2864304-2864459:1:exon
so has part: feature:2864547-2864641:1:exon
so has part: feature:2865870-2866539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2855411-2856658:1:exon

position:2856658:1
position: 2856658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2864304-2864459:1:exon

position:2864304:1
position: 2864304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2864459:1
position: 2864459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2864547-2864641:1:exon

position:2864547:1
position: 2864547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2864641:1
position: 2864641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2865870-2866539:1:exon

position:2865870:1
position: 2865870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109918385
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109918385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2898131..2916905
location: region:2898131-2916905:1
so has part: feature:2898131-2916905:1:exon
subclass of: SO_0000010

109918385
type: Gene
SIO_000068: ncbigene

position:2898131:1
position: 2898131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2916905:1
position: 2916905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898131-2916905:1:exon

LOC109918385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918385
product: thiamine transporter 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020518306.2
SIO_010081: LOC109918385
subclass of: SO_0000673
so part of: LOC109918385
location: join(2898131..2898301,2902608..2903424,2908040..2908232,2911168..2911309,2916556..2916905)
location: region:2898131-2916905:1
so has part: feature:2898131-2898301:1:exon
so has part: feature:2902608-2903424:1:exon
so has part: feature:2908040-2908232:1:exon
so has part: feature:2911168-2911309:1:exon
so has part: feature:2916556-2916905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2898131-2898301:1:exon

position:2898301:1
position: 2898301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2902608-2903424:1:exon

position:2902608:1
position: 2902608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2903424:1
position: 2903424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2908040-2908232:1:exon

position:2908040:1
position: 2908040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2908232:1
position: 2908232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2911168-2911309:1:exon

position:2911168:1
position: 2911168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2911309:1
position: 2911309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2916556-2916905:1:exon

position:2916556:1
position: 2916556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109918385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thiamine transporter 2-like
translation: MLICCKGAGCCKAAKNNDWCYPTLLLCAFGFFSMMRPSEPFLTPYLVGPAKNLTAEQVTNEMFPVWTYSYLVILFPVFVVTDYLRYKPIIVVQGLSYVITWLMLLFAQGILAMQFLEFFFGTASATEVAYYSYIYSVVSAEHYQKVTSYCRSVTLVAYTLGSILGQVLVSVWNVPYFYLNVIALISVSLAFLSSIPLPMPERSMFFHRKEAANIQASPPMEYVKSENSSPENNPDVTGSHLPIMSDGDEDDLVKATEKKNAIMVLPKLWSDFKECYSSPRIFYWSVWWALATCGYNQVVNYIQVLWDHVEPSQNSTVYNGGVEAVSTFVSAGTSFAVGYINVDWAIWGEMALGIFSTVNSSALFAIDLSNNIWICYGGYVVFKATYMLLITIATFQIASNLSIERYALLFGVNTFVALLLQTILTVIVVDSRGLGLDVITQFLIYGSYFAAISGLFYIRGIYTLIQHGQKRKKKTEPEIKGNNATPKDETRSTEEF
SIO_010081: LOC109918385
subclass of: SO_0000673
so part of: LOC109918385
location: join(2898131..2898301,2902608..2903424,2908040..2908232,2911168..2911309,2916556..2916723)
location: region:2898131-2916723:1
so has part: feature:2898131-2898301:1:exon
so has part: feature:2902608-2903424:1:exon
so has part: feature:2908040-2908232:1:exon
so has part: feature:2911168-2911309:1:exon
so has part: feature:2916556-2916723:1:exon

XP_020373895.1
type: Protein
SIO_000068: ncbiprotein

position:2916723:1
position: 2916723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898131-2898301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2902608-2903424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2908040-2908232:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2911168-2911309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2916556-2916723:1:exon

rfc4
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: rfc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2925395..2946033)
location: region:2925395-2946033:-1
so has part: feature:2925395-2946033:-1:exon
subclass of: SO_0000010

109921607
type: Gene
SIO_000068: ncbigene

position:2925395:-1
position: 2925395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2946033:-1
position: 2946033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2925395-2946033:-1:exon

rfc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rfc4
product: replication factor C (activator 1) 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048604403.1
SIO_010081: rfc4
subclass of: SO_0000673
so part of: rfc4
location: complement(join(2925395..2925598,2927995..2928138,2937615..2937734,2940046..2940125,2942307..2942385,2944382..2944507,2945938..2946033))
location: region:2925395-2946033:-1
so has part: feature:2945938-2946033:-1:exon
so has part: feature:2944382-2944507:-1:exon
so has part: feature:2942307-2942385:-1:exon
so has part: feature:2940046-2940125:-1:exon
so has part: feature:2937615-2937734:-1:exon
so has part: feature:2927995-2928138:-1:exon
so has part: feature:2925395-2925598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2945938-2946033:-1:exon

position:2945938:-1
position: 2945938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2944382-2944507:-1:exon

position:2944382:-1
position: 2944382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2944507:-1
position: 2944507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2942307-2942385:-1:exon

position:2942307:-1
position: 2942307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2942385:-1
position: 2942385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2940046-2940125:-1:exon

position:2940046:-1
position: 2940046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940125:-1
position: 2940125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2937615-2937734:-1:exon

position:2937615:-1
position: 2937615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2937734:-1
position: 2937734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2927995-2928138:-1:exon

position:2927995:-1
position: 2927995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2928138:-1
position: 2928138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2925395-2925598:-1:exon

position:2925598:-1
position: 2925598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rfc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: rfc4
product: replication factor C (activator 1) 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048604402.1
SIO_010081: rfc4
subclass of: SO_0000673
so part of: rfc4
location: complement(join(2925395..2925598,2927995..2928138,2937615..2937734,2940046..2940125,2942307..2942385,2944382..2944507,2945893..2945995))
location: region:2925395-2945995:-1
so has part: feature:2945893-2945995:-1:exon
so has part: feature:2944382-2944507:-1:exon
so has part: feature:2942307-2942385:-1:exon
so has part: feature:2940046-2940125:-1:exon
so has part: feature:2937615-2937734:-1:exon
so has part: feature:2927995-2928138:-1:exon
so has part: feature:2925395-2925598:-1:exon

position:2945995:-1
position: 2945995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2945893-2945995:-1:exon

position:2945893:-1
position: 2945893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2944382-2944507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2942307-2942385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940046-2940125:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2937615-2937734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2927995-2928138:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2925395-2925598:-1:exon

rfc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rfc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication factor C subunit 4
translation: MQAFLKGPGVISSKPVKEKAAAGTSGENKKQKPVPWVEKYRPKCVSEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELYRKRILELNASDERGIQVIREKVKNFAQLTVAGSRPDGKPAPPFKIVILDEADSMTNAAQAALRRTMERESKTTRFCLICNYISRIIEPLTSRCSKFRFKPLTDDIQQKRLLDICVKENMQCSDQVGLWCCVTCLEFKF
SIO_010081: rfc4
subclass of: SO_0000673
so part of: rfc4
location: complement(join(2925433..2925598,2927995..2928138,2937615..2937734,2940046..2940125,2942307..2942385,2944382..2944500))
location: region:2925433-2944500:-1
so has part: feature:2944382-2944500:-1:exon
so has part: feature:2942307-2942385:-1:exon
so has part: feature:2940046-2940125:-1:exon
so has part: feature:2937615-2937734:-1:exon
so has part: feature:2927995-2928138:-1:exon
so has part: feature:2925433-2925598:-1:exon

XP_048460359.1
type: Protein
SIO_000068: ncbiprotein

position:2925433:-1
position: 2925433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2944500:-1
position: 2944500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2944382-2944500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2942307-2942385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2940046-2940125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2937615-2937734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2927995-2928138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2925433-2925598:-1:exon

rfc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: rfc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication factor C subunit 4
translation: MQAFLKGPGVISSKPVKEKAAAGTSGENKKQKPVPWVEKYRPKCVSEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELYRKRILELNASDERGIQVIREKVKNFAQLTVAGSRPDGKPAPPFKIVILDEADSMTNAAQAALRRTMERESKTTRFCLICNYISRIIEPLTSRCSKFRFKPLTDDIQQKRLLDICVKENMQCSDQVGLWCCVTCLEFKF
SIO_010081: rfc4
subclass of: SO_0000673
so part of: rfc4
location: complement(join(2925433..2925598,2927995..2928138,2937615..2937734,2940046..2940125,2942307..2942385,2944382..2944500))
location: region:2925433-2944500:-1
so has part: feature:2944382-2944500:-1:exon
so has part: feature:2942307-2942385:-1:exon
so has part: feature:2940046-2940125:-1:exon
so has part: feature:2937615-2937734:-1:exon
so has part: feature:2927995-2928138:-1:exon
so has part: feature:2925433-2925598:-1:exon

XP_048460360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2944382-2944500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2942307-2942385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2940046-2940125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2937615-2937734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2927995-2928138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2925433-2925598:-1:exon

LOC125484697
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3029535..3055189)
location: region:3029535-3055189:-1
so has part: feature:3029535-3055189:-1:exon
subclass of: SO_0000010

125484697
type: Gene
SIO_000068: ncbigene

position:3029535:-1
position: 3029535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3055189:-1
position: 3055189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3029535-3055189:-1:exon

LOC125484697
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484697
product: uncharacterized LOC125484697
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048604480.1
SIO_010081: LOC125484697
subclass of: SO_0000673
so part of: LOC125484697
location: complement(join(3029535..3029662,3033325..3033431,3041050..3041179,3047219..3047367,3055082..3055189))
location: region:3029535-3055189:-1
so has part: feature:3055082-3055189:-1:exon
so has part: feature:3047219-3047367:-1:exon
so has part: feature:3041050-3041179:-1:exon
so has part: feature:3033325-3033431:-1:exon
so has part: feature:3029535-3029662:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3055082-3055189:-1:exon

position:3055082:-1
position: 3055082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3047219-3047367:-1:exon

position:3047219:-1
position: 3047219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3047367:-1
position: 3047367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3041050-3041179:-1:exon

position:3041050:-1
position: 3041050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3041179:-1
position: 3041179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3033325-3033431:-1:exon

position:3033325:-1
position: 3033325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3033431:-1
position: 3033431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3029535-3029662:-1:exon

position:3029662:-1
position: 3029662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484697
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125484697
translation: MCYCNLGPPNGSLLGDLVANTAIRDLFLDGNNLQCEGACELITFIADYAENMARMKFGASTHFEEDPLTHSLEGKHKQELPQIAPWLSRLHLTDNSIDGRGNSSTMGPIMFTEILCQLIKFSDHLTELDLDNNCLGELCGKEILKALRERKEAKLQSLSIKVTAQMNEDTFSNILNNSKKLKKSKRKKVNNSME
SIO_010081: LOC125484697
subclass of: SO_0000673
so part of: LOC125484697
location: complement(join(3029535..3029662,3033325..3033431,3041050..3041179,3047219..3047367,3055082..3055152))
location: region:3029535-3055152:-1
so has part: feature:3055082-3055152:-1:exon
so has part: feature:3047219-3047367:-1:exon
so has part: feature:3041050-3041179:-1:exon
so has part: feature:3033325-3033431:-1:exon
so has part: feature:3029535-3029662:-1:exon

XP_048460437.1
type: Protein
SIO_000068: ncbiprotein

position:3055152:-1
position: 3055152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055082-3055152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3047219-3047367:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3041050-3041179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3033325-3033431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3029535-3029662:-1:exon

LOC125484657
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3071907..3079028)
location: region:3071907-3079028:-1
so has part: feature:3071907-3079028:-1:exon
subclass of: SO_0000011

125484657
type: Gene
SIO_000068: ncbigene

position:3071907:-1
position: 3071907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3079028:-1
position: 3079028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071907-3079028:-1:exon

LOC125484657
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484657
product: uncharacterized LOC125484657
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007263468.1
SIO_010081: LOC125484657
subclass of: SO_0000673
so part of: LOC125484657
location: complement(join(3071907..3072013,3075706..3075902,3078914..3079028))
location: region:3071907-3079028:-1
so has part: feature:3078914-3079028:-1:exon
so has part: feature:3075706-3075902:-1:exon
so has part: feature:3071907-3072013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3078914-3079028:-1:exon

position:3078914:-1
position: 3078914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3075706-3075902:-1:exon

position:3075706:-1
position: 3075706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3075902:-1
position: 3075902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3071907-3072013:-1:exon

position:3072013:-1
position: 3072013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109938244
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109938244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3102765..3143098
location: region:3102765-3143098:1
so has part: feature:3102765-3143098:1:exon
subclass of: SO_0000010

109938244
type: Gene
SIO_000068: ncbigene

position:3102765:1
position: 3102765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143098:1
position: 3143098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3102765-3143098:1:exon

LOC109938244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109938244
product: transmembrane protein 255B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020536686.2
SIO_010081: LOC109938244
subclass of: SO_0000673
so part of: LOC109938244
location: join(3102765..3102964,3106735..3106877,3115617..3115679,3128882..3128971,3129404..3129484,3134064..3134149,3136092..3136251,3139752..3139901,3141177..3143098)
location: region:3102765-3143098:1
so has part: feature:3102765-3102964:1:exon
so has part: feature:3106735-3106877:1:exon
so has part: feature:3115617-3115679:1:exon
so has part: feature:3128882-3128971:1:exon
so has part: feature:3129404-3129484:1:exon
so has part: feature:3134064-3134149:1:exon
so has part: feature:3136092-3136251:1:exon
so has part: feature:3139752-3139901:1:exon
so has part: feature:3141177-3143098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3102765-3102964:1:exon

position:3102964:1
position: 3102964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3106735-3106877:1:exon

position:3106735:1
position: 3106735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3106877:1
position: 3106877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3115617-3115679:1:exon

position:3115617:1
position: 3115617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3115679:1
position: 3115679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3128882-3128971:1:exon

position:3128882:1
position: 3128882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3128971:1
position: 3128971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3129404-3129484:1:exon

position:3129404:1
position: 3129404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3129484:1
position: 3129484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3134064-3134149:1:exon

position:3134064:1
position: 3134064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3134149:1
position: 3134149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3136092-3136251:1:exon

position:3136092:1
position: 3136092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3136251:1
position: 3136251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3139752-3139901:1:exon

position:3139752:1
position: 3139752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3139901:1
position: 3139901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3141177-3143098:1:exon

position:3141177:1
position: 3141177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109938244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109938244
product: transmembrane protein 255B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048604615.1
SIO_010081: LOC109938244
subclass of: SO_0000673
so part of: LOC109938244
location: join(3102765..3102964,3106735..3106877,3115617..3115679,3128882..3128971,3129404..3129484,3134064..3134149,3136092..3136251,3139752..3139901,3142404..3143098)
location: region:3102765-3143098:1
so has part: feature:3102765-3102964:1:exon
so has part: feature:3106735-3106877:1:exon
so has part: feature:3115617-3115679:1:exon
so has part: feature:3128882-3128971:1:exon
so has part: feature:3129404-3129484:1:exon
so has part: feature:3134064-3134149:1:exon
so has part: feature:3136092-3136251:1:exon
so has part: feature:3139752-3139901:1:exon
so has part: feature:3142404-3143098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3102765-3102964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3106735-3106877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3115617-3115679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3128882-3128971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3129404-3129484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3134064-3134149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3136092-3136251:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3139752-3139901:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3142404-3143098:1:exon

position:3142404:1
position: 3142404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109938244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109938244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 255B isoform X2
translation: MRAGGCGELGTARSWRLVQQHLIQEEKDRQREMQRTEEQNQPRFQLFELLMKRKKRAVWLSSVLLLLSLVIIAVGIFTETRTENISIIGYASGIILAFGSFLGLLGLFLDENRKQLLVAAITFLSFGIVGAFICVVVDGVFTAVSIDLRPLHAGRCQYYTSGQNYIYENYLATVPCQSFTESCNLKVRSNTCYCCDLYNCANGDYLNNYFEFVGVKSCQEIQSIYIMIWLVTTLNVSAFILGIATSAILGNFKNMESLIGPDVSVQLLNFQNSRCKAKEQAQSQPSISPSAPLLLQEEGGDTMQQVHSRL
SIO_010081: LOC109938244
subclass of: SO_0000673
so part of: LOC109938244
location: join(3102823..3102964,3106735..3106877,3115617..3115679,3128882..3128971,3129404..3129484,3134064..3134149,3136092..3136251,3139752..3139901,3142404..3142421)
location: region:3102823-3142421:1
so has part: feature:3102823-3102964:1:exon
so has part: feature:3106735-3106877:1:exon
so has part: feature:3115617-3115679:1:exon
so has part: feature:3128882-3128971:1:exon
so has part: feature:3129404-3129484:1:exon
so has part: feature:3134064-3134149:1:exon
so has part: feature:3136092-3136251:1:exon
so has part: feature:3139752-3139901:1:exon
so has part: feature:3142404-3142421:1:exon

XP_048460572.1
type: Protein
SIO_000068: ncbiprotein

position:3102823:1
position: 3102823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142421:1
position: 3142421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3102823-3102964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3106735-3106877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3115617-3115679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3128882-3128971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3129404-3129484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3134064-3134149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3136092-3136251:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3139752-3139901:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3142404-3142421:1:exon

LOC109938244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109938244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 255B isoform X1
translation: MRAGGCGELGTARSWRLVQQHLIQEEKDRQREMQRTEEQNQPRFQLFELLMKRKKRAVWLSSVLLLLSLVIIAVGIFTETRTENISIIGYASGIILAFGSFLGLLGLFLDENRKQLLVAAITFLSFGIVGAFICVVVDGVFTAVSIDLRPLHAGRCQYYTSGQNYIYENYLATVPCQSFTESCNLKVRSNTCYCCDLYNCANGDYLNNYFEFVGVKSCQEIQSIYIMIWLVTTLNVSAFILGIATSAILGNFKNMESLIGPDVSVQLLNFQNSRCKAKEQAQSQPSISPSAPLLLQEEGGDTMQQRPSVHYMSVPATTSLTCCNHSHMKINNNPPPFAPLYNFLPEKPLGYLI
SIO_010081: LOC109938244
subclass of: SO_0000673
so part of: LOC109938244
location: join(3102823..3102964,3106735..3106877,3115617..3115679,3128882..3128971,3129404..3129484,3134064..3134149,3136092..3136251,3139752..3139901,3141177..3141323)
location: region:3102823-3141323:1
so has part: feature:3102823-3102964:1:exon
so has part: feature:3106735-3106877:1:exon
so has part: feature:3115617-3115679:1:exon
so has part: feature:3128882-3128971:1:exon
so has part: feature:3129404-3129484:1:exon
so has part: feature:3134064-3134149:1:exon
so has part: feature:3136092-3136251:1:exon
so has part: feature:3139752-3139901:1:exon
so has part: feature:3141177-3141323:1:exon

XP_020392275.2
type: Protein
SIO_000068: ncbiprotein

position:3141323:1
position: 3141323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3102823-3102964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3106735-3106877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3115617-3115679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3128882-3128971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3129404-3129484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3134064-3134149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3136092-3136251:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3139752-3139901:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3141177-3141323:1:exon

LOC109936745
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3181673..3256794)
location: region:3181673-3256794:-1
so has part: feature:3181673-3256794:-1:exon
subclass of: SO_0000010

109936745
type: Gene
SIO_000068: ncbigene

position:3181673:-1
position: 3181673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3256794:-1
position: 3256794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3181673-3256794:-1:exon

LOC109936745
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936745
product: ras GTPase-activating protein 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
transcript id: XM_048604481.1
SIO_010081: LOC109936745
subclass of: SO_0000673
so part of: LOC109936745
location: complement(join(3181673..3183899,3187719..3187908,3188188..3188291,3190130..3190347,3202219..3202301,3221740..3221824,3222304..3222381,3222467..3222553,3223477..3223583,3233285..3233408,3234923..3234997,3236794..3236908,3239798..3239946,3242000..3242156,3247160..3247261,3255419..3255495,3255635..3255707,3256623..3256794))
location: region:3181673-3256794:-1
so has part: feature:3256623-3256794:-1:exon
so has part: feature:3255635-3255707:-1:exon
so has part: feature:3255419-3255495:-1:exon
so has part: feature:3247160-3247261:-1:exon
so has part: feature:3242000-3242156:-1:exon
so has part: feature:3239798-3239946:-1:exon
so has part: feature:3236794-3236908:-1:exon
so has part: feature:3234923-3234997:-1:exon
so has part: feature:3233285-3233408:-1:exon
so has part: feature:3223477-3223583:-1:exon
so has part: feature:3222467-3222553:-1:exon
so has part: feature:3222304-3222381:-1:exon
so has part: feature:3221740-3221824:-1:exon
so has part: feature:3202219-3202301:-1:exon
so has part: feature:3190130-3190347:-1:exon
so has part: feature:3188188-3188291:-1:exon
so has part: feature:3187719-3187908:-1:exon
so has part: feature:3181673-3183899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3256623-3256794:-1:exon

position:3256623:-1
position: 3256623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3255635-3255707:-1:exon

position:3255635:-1
position: 3255635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255707:-1
position: 3255707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3255419-3255495:-1:exon

position:3255419:-1
position: 3255419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255495:-1
position: 3255495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3247160-3247261:-1:exon

position:3247160:-1
position: 3247160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3247261:-1
position: 3247261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3242000-3242156:-1:exon

position:3242000:-1
position: 3242000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3242156:-1
position: 3242156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3239798-3239946:-1:exon

position:3239798:-1
position: 3239798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3239946:-1
position: 3239946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3236794-3236908:-1:exon

position:3236794:-1
position: 3236794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3236908:-1
position: 3236908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3234923-3234997:-1:exon

position:3234923:-1
position: 3234923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3234997:-1
position: 3234997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3233285-3233408:-1:exon

position:3233285:-1
position: 3233285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233408:-1
position: 3233408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3223477-3223583:-1:exon

position:3223477:-1
position: 3223477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3223583:-1
position: 3223583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3222467-3222553:-1:exon

position:3222467:-1
position: 3222467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3222553:-1
position: 3222553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3222304-3222381:-1:exon

position:3222304:-1
position: 3222304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3222381:-1
position: 3222381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3221740-3221824:-1:exon

position:3221740:-1
position: 3221740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3221824:-1
position: 3221824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3202219-3202301:-1:exon

position:3202219:-1
position: 3202219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3202301:-1
position: 3202301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3190130-3190347:-1:exon

position:3190130:-1
position: 3190130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3190347:-1
position: 3190347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3188188-3188291:-1:exon

position:3188188:-1
position: 3188188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3188291:-1
position: 3188291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3187719-3187908:-1:exon

position:3187719:-1
position: 3187719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3187908:-1
position: 3187908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3181673-3183899:-1:exon

position:3183899:-1
position: 3183899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109936745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936745
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ras GTPase-activating protein 2
translation: MPEERLVLKRSDNKTKLICHKLFALFFHRVIECQGLPLVSGQSGDPYASVSLVGPSRLDQKRTKVKKKTSNPQFDETFYFEVTRNSSYTRKSHFQVEEENIEKLEIRVDLWNNENLVQDIFLGEIRVPVKILKNDNCHRAWYLLQPKDNGNKSAKSEDLGSLRLSISYNEDYVLPSKYYSSLNDLLLMSSDVKPISASAVHILGEVCREKQEAVLPLVRLLLHHKKLGPFLSAIAELDLQQTQEANTIFRGNTLATRCIDETMKLVGKHYLKVTLKSILDEICDSCKTCEIDPVKLKEGDNVEVNKENLRQYVERVFNVIVKSSMSCPTLMCEVFNSLQNLARKQFPDDPHVKYSAVSSFVFLRFFAVAVVSPHSFHLRPHHPDAQTTRVLTLISKTIQTLGSWGSLSKNKLSSFKESYMCDFFKLFQEEKCIESVKKTFASHIKYLLITNDFSNSAMQFISLADLGKESLYSILIKNIIAVEKLEERCFNRKNMFQVLSIERPERPLYVQAGNCVEANEWIEIITRVSRSNPERLHVYHPCAFISGSWICCKNTDEKAAGCTSCTGGSPANIQLAIDCDREAERIFSLFRANLPRLQKMEDACGSIDVYQGPQLEQDEYAHFTIEDSRVTFKTLQQIITVVNTLATFHEQYRIKRSTSAIYGSEENPIGAK
SIO_010081: LOC109936745
subclass of: SO_0000673
so part of: LOC109936745
location: complement(join(3183875..3183899,3187719..3187908,3188188..3188291,3190130..3190347,3202219..3202301,3221740..3221824,3222304..3222381,3222467..3222553,3223477..3223583,3233285..3233408,3234923..3234997,3236794..3236908,3239798..3239946,3242000..3242156,3247160..3247261,3255419..3255495,3255635..3255707,3256623..3256794))
location: region:3183875-3256794:-1
so has part: feature:3256623-3256794:-1:exon
so has part: feature:3255635-3255707:-1:exon
so has part: feature:3255419-3255495:-1:exon
so has part: feature:3247160-3247261:-1:exon
so has part: feature:3242000-3242156:-1:exon
so has part: feature:3239798-3239946:-1:exon
so has part: feature:3236794-3236908:-1:exon
so has part: feature:3234923-3234997:-1:exon
so has part: feature:3233285-3233408:-1:exon
so has part: feature:3223477-3223583:-1:exon
so has part: feature:3222467-3222553:-1:exon
so has part: feature:3222304-3222381:-1:exon
so has part: feature:3221740-3221824:-1:exon
so has part: feature:3202219-3202301:-1:exon
so has part: feature:3190130-3190347:-1:exon
so has part: feature:3188188-3188291:-1:exon
so has part: feature:3187719-3187908:-1:exon
so has part: feature:3183875-3183899:-1:exon

XP_048460438.1
type: Protein
SIO_000068: ncbiprotein

position:3183875:-1
position: 3183875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3256623-3256794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3255635-3255707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3255419-3255495:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3247160-3247261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3242000-3242156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3239798-3239946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3236794-3236908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3234923-3234997:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3233285-3233408:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3223477-3223583:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3222467-3222553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3222304-3222381:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3221740-3221824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3202219-3202301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3190130-3190347:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3188188-3188291:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3187719-3187908:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3183875-3183899:-1:exon

zbtb38
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: zbtb38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3403593..3509910)
location: region:3403593-3509910:-1
so has part: feature:3403593-3509910:-1:exon
subclass of: SO_0000010

109936744
type: Gene
SIO_000068: ncbigene

position:3403593:-1
position: 3403593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3509910:-1
position: 3509910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3403593-3509910:-1:exon

zbtb38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zbtb38
product: zinc finger and BTB domain containing 38, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604765.1
SIO_010081: zbtb38
subclass of: SO_0000673
so part of: zbtb38
location: complement(join(3403593..3408778,3507670..3507901,3509852..3509910))
location: region:3403593-3509910:-1
so has part: feature:3509852-3509910:-1:exon
so has part: feature:3507670-3507901:-1:exon
so has part: feature:3403593-3408778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3509852-3509910:-1:exon

position:3509852:-1
position: 3509852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3507670-3507901:-1:exon

position:3507670:-1
position: 3507670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507901:-1
position: 3507901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3403593-3408778:-1:exon

position:3408778:-1
position: 3408778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zbtb38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zbtb38
product: zinc finger and BTB domain containing 38, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604764.1
SIO_010081: zbtb38
subclass of: SO_0000673
so part of: zbtb38
location: complement(join(3403593..3408778,3507670..3507901,3508530..3508669))
location: region:3403593-3508669:-1
so has part: feature:3508530-3508669:-1:exon
so has part: feature:3507670-3507901:-1:exon
so has part: feature:3403593-3408778:-1:exon

position:3508669:-1
position: 3508669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3508530-3508669:-1:exon

position:3508530:-1
position: 3508530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3507670-3507901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3403593-3408778:-1:exon

zbtb38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zbtb38
product: zinc finger and BTB domain containing 38, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604766.1
SIO_010081: zbtb38
subclass of: SO_0000673
so part of: zbtb38
location: complement(join(3403593..3408778,3457893..3457990))
location: region:3403593-3457990:-1
so has part: feature:3457893-3457990:-1:exon
so has part: feature:3403593-3408778:-1:exon

position:3457990:-1
position: 3457990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3457893-3457990:-1:exon

position:3457893:-1
position: 3457893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3403593-3408778:-1:exon

zbtb38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zbtb38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 38 isoform X1
translation: MYNIQRPRVNLVNWIFKPNNSQEETPQVLPLHGTDPKPLDRCYFICLQKIAMPSSTDMMDNSHSQTVLCCLNEQRTKGVFCDVTIVVEDAKFKAHKNVLAAASIYFKNLFSSQELWLVGHILELPDFKADVFAEILHFIYSAKVAIKGYERVQELVDAGKRLGISFLENLMPIPQQHIEPVNALSSCSPNSTQSVSSASSLSLPTSLPNFKAEDCNAMSDKGSEDFHCVNGPRITNAFSIFDMQAGNDMYFPVDLTTNVNKKTTESDKLSMVCVGQAANGTQQIPAHTFAEHSYAVSSSRKDQQNVDPPYDLQVKEPVEENEKPLCNINSNTADSGATQEMQLEDQISKAPQTLYTASSTGFNVLRFNLNALQTANDSSPVNVVPATDPLNGPDVETKETEGGGNDEERTSAMENMSKLVSNTVWSETAPAVPCQTPYNCKYCPRSFSTRASLNVHSQIHTTLLEKPLSCRHCGKPFVHLKRLQTHEHLCRGPGTTLSDRESTDEQVENICSDNEVASGEEDRNSISHALEIEPSNKCPLKLVQSRRGNSSPEPEHFVKVVEGHILYFCSVCKRSYVTLSSLKRHANVHSWRRTYPCHYCNKVFALAEYRTKHEIWHTGERRYQCIFCLETFMTYYTLKTHQKSFHGIDPGLPTNKKAASGGYRAKMYPFKLYRLLPMKLQKRPYKTYTRSCPETCKDNKVVGVPSTDENASSLDINNFSISSSMSSTSEHLQDKLLSSEIMPSQQSSLCAPGSFLTERSESGARETCLLAECEDGSLSAGCYLNDPLLSCTSTENETYHNDKDDADNRQQPLATDMNSTGLSVINYGHTAQSVIMHSNRVSSVIKHGNAFSSVITYNHGVQSGNDIYHPLSQTNMSNDSLDTNPRKNISKDCVRFQKKGIYKEGNGQITELVATQKNHSSPLSGGCRTETYIAKPAFPGTSTDSQVAPLCQITVKIGDKAVVQRQITGSKQFRRKGRKPKYMIPNEEKMVQDIKLEESEEQITKSPSYTDPIGSIADSTGGIETCDEMSDHDSNDKLWRPYYSYKPKKRSKGFNKLRKSRWKKNGGCNVDSPSVPIPAISEEQNFDIPKGIALNEEINDVSQESNCTLGNKTKHSEEAKRQLKCHSTTKPYSCTICTKLFPNSSTLKMHMRCHTGEQPFSCKSCGRRFSVQGNLHKHERIHLGVKEFVCLYCNKAFTLSETLKKHERIHTGEKRYRCHFCPRRFLYLTTKKNHEQRHLERKRAQQVGKEHVCFQCFKVCKTAAALGMHQKKHLIKHPSCEDAEGSKNYQSDLHTNMTCPTVAESKLKNRTEAENKLKLATTTSSCEQNHSSCDTELSPDCGQPHLPTVQTNSAKYPWPSAHDISADPLQRSLPQNSENIWQIHQQNLDINLPICRNISYQCENSDRDDSRFVFYQHSSKMFYTHQGEGMVYKAM
SIO_010081: zbtb38
subclass of: SO_0000673
so part of: zbtb38
location: complement(join(3404615..3408778,3507670..3507813))
location: region:3404615-3507813:-1
so has part: feature:3507670-3507813:-1:exon
so has part: feature:3404615-3408778:-1:exon

XP_048460721.1
type: Protein
SIO_000068: ncbiprotein

position:3404615:-1
position: 3404615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507813:-1
position: 3507813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507670-3507813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3404615-3408778:-1:exon

zbtb38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zbtb38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 38 isoform X1
translation: MYNIQRPRVNLVNWIFKPNNSQEETPQVLPLHGTDPKPLDRCYFICLQKIAMPSSTDMMDNSHSQTVLCCLNEQRTKGVFCDVTIVVEDAKFKAHKNVLAAASIYFKNLFSSQELWLVGHILELPDFKADVFAEILHFIYSAKVAIKGYERVQELVDAGKRLGISFLENLMPIPQQHIEPVNALSSCSPNSTQSVSSASSLSLPTSLPNFKAEDCNAMSDKGSEDFHCVNGPRITNAFSIFDMQAGNDMYFPVDLTTNVNKKTTESDKLSMVCVGQAANGTQQIPAHTFAEHSYAVSSSRKDQQNVDPPYDLQVKEPVEENEKPLCNINSNTADSGATQEMQLEDQISKAPQTLYTASSTGFNVLRFNLNALQTANDSSPVNVVPATDPLNGPDVETKETEGGGNDEERTSAMENMSKLVSNTVWSETAPAVPCQTPYNCKYCPRSFSTRASLNVHSQIHTTLLEKPLSCRHCGKPFVHLKRLQTHEHLCRGPGTTLSDRESTDEQVENICSDNEVASGEEDRNSISHALEIEPSNKCPLKLVQSRRGNSSPEPEHFVKVVEGHILYFCSVCKRSYVTLSSLKRHANVHSWRRTYPCHYCNKVFALAEYRTKHEIWHTGERRYQCIFCLETFMTYYTLKTHQKSFHGIDPGLPTNKKAASGGYRAKMYPFKLYRLLPMKLQKRPYKTYTRSCPETCKDNKVVGVPSTDENASSLDINNFSISSSMSSTSEHLQDKLLSSEIMPSQQSSLCAPGSFLTERSESGARETCLLAECEDGSLSAGCYLNDPLLSCTSTENETYHNDKDDADNRQQPLATDMNSTGLSVINYGHTAQSVIMHSNRVSSVIKHGNAFSSVITYNHGVQSGNDIYHPLSQTNMSNDSLDTNPRKNISKDCVRFQKKGIYKEGNGQITELVATQKNHSSPLSGGCRTETYIAKPAFPGTSTDSQVAPLCQITVKIGDKAVVQRQITGSKQFRRKGRKPKYMIPNEEKMVQDIKLEESEEQITKSPSYTDPIGSIADSTGGIETCDEMSDHDSNDKLWRPYYSYKPKKRSKGFNKLRKSRWKKNGGCNVDSPSVPIPAISEEQNFDIPKGIALNEEINDVSQESNCTLGNKTKHSEEAKRQLKCHSTTKPYSCTICTKLFPNSSTLKMHMRCHTGEQPFSCKSCGRRFSVQGNLHKHERIHLGVKEFVCLYCNKAFTLSETLKKHERIHTGEKRYRCHFCPRRFLYLTTKKNHEQRHLERKRAQQVGKEHVCFQCFKVCKTAAALGMHQKKHLIKHPSCEDAEGSKNYQSDLHTNMTCPTVAESKLKNRTEAENKLKLATTTSSCEQNHSSCDTELSPDCGQPHLPTVQTNSAKYPWPSAHDISADPLQRSLPQNSENIWQIHQQNLDINLPICRNISYQCENSDRDDSRFVFYQHSSKMFYTHQGEGMVYKAM
SIO_010081: zbtb38
subclass of: SO_0000673
so part of: zbtb38
location: complement(join(3404615..3408778,3507670..3507813))
location: region:3404615-3507813:-1
so has part: feature:3507670-3507813:-1:exon
so has part: feature:3404615-3408778:-1:exon

XP_048460722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3507670-3507813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3404615-3408778:-1:exon

zbtb38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zbtb38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 38 isoform X2
translation: MPSSTDMMDNSHSQTVLCCLNEQRTKGVFCDVTIVVEDAKFKAHKNVLAAASIYFKNLFSSQELWLVGHILELPDFKADVFAEILHFIYSAKVAIKGYERVQELVDAGKRLGISFLENLMPIPQQHIEPVNALSSCSPNSTQSVSSASSLSLPTSLPNFKAEDCNAMSDKGSEDFHCVNGPRITNAFSIFDMQAGNDMYFPVDLTTNVNKKTTESDKLSMVCVGQAANGTQQIPAHTFAEHSYAVSSSRKDQQNVDPPYDLQVKEPVEENEKPLCNINSNTADSGATQEMQLEDQISKAPQTLYTASSTGFNVLRFNLNALQTANDSSPVNVVPATDPLNGPDVETKETEGGGNDEERTSAMENMSKLVSNTVWSETAPAVPCQTPYNCKYCPRSFSTRASLNVHSQIHTTLLEKPLSCRHCGKPFVHLKRLQTHEHLCRGPGTTLSDRESTDEQVENICSDNEVASGEEDRNSISHALEIEPSNKCPLKLVQSRRGNSSPEPEHFVKVVEGHILYFCSVCKRSYVTLSSLKRHANVHSWRRTYPCHYCNKVFALAEYRTKHEIWHTGERRYQCIFCLETFMTYYTLKTHQKSFHGIDPGLPTNKKAASGGYRAKMYPFKLYRLLPMKLQKRPYKTYTRSCPETCKDNKVVGVPSTDENASSLDINNFSISSSMSSTSEHLQDKLLSSEIMPSQQSSLCAPGSFLTERSESGARETCLLAECEDGSLSAGCYLNDPLLSCTSTENETYHNDKDDADNRQQPLATDMNSTGLSVINYGHTAQSVIMHSNRVSSVIKHGNAFSSVITYNHGVQSGNDIYHPLSQTNMSNDSLDTNPRKNISKDCVRFQKKGIYKEGNGQITELVATQKNHSSPLSGGCRTETYIAKPAFPGTSTDSQVAPLCQITVKIGDKAVVQRQITGSKQFRRKGRKPKYMIPNEEKMVQDIKLEESEEQITKSPSYTDPIGSIADSTGGIETCDEMSDHDSNDKLWRPYYSYKPKKRSKGFNKLRKSRWKKNGGCNVDSPSVPIPAISEEQNFDIPKGIALNEEINDVSQESNCTLGNKTKHSEEAKRQLKCHSTTKPYSCTICTKLFPNSSTLKMHMRCHTGEQPFSCKSCGRRFSVQGNLHKHERIHLGVKEFVCLYCNKAFTLSETLKKHERIHTGEKRYRCHFCPRRFLYLTTKKNHEQRHLERKRAQQVGKEHVCFQCFKVCKTAAALGMHQKKHLIKHPSCEDAEGSKNYQSDLHTNMTCPTVAESKLKNRTEAENKLKLATTTSSCEQNHSSCDTELSPDCGQPHLPTVQTNSAKYPWPSAHDISADPLQRSLPQNSENIWQIHQQNLDINLPICRNISYQCENSDRDDSRFVFYQHSSKMFYTHQGEGMVYKAM
SIO_010081: zbtb38
subclass of: SO_0000673
so part of: zbtb38
location: complement(3404615..3408769)
location: region:3404615-3408769:-1
so has part: feature:3404615-3408769:-1:exon

XP_048460723.1
type: Protein
SIO_000068: ncbiprotein

position:3408769:-1
position: 3408769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3404615-3408769:-1:exon

zbtb38
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: zbtb38
product: zinc finger and BTB domain containing 38, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_007263563.1
SIO_010081: zbtb38
so part of: zbtb38
location: complement(join(3497757..3497946,3507670..3507754))
location: region:3497757-3507754:-1
so has part: feature:3507670-3507754:-1:exon
so has part: feature:3497757-3497946:-1:exon

position:3497757:-1
position: 3497757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507754:-1
position: 3507754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507670-3507754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3497757-3497946:-1:exon

position:3497946:-1
position: 3497946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zbtb38
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: zbtb38
product: zinc finger and BTB domain containing 38, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007263562.1
SIO_010081: zbtb38
so part of: zbtb38
location: complement(join(3504350..3505595,3507670..3507783))
location: region:3504350-3507783:-1
so has part: feature:3507670-3507783:-1:exon
so has part: feature:3504350-3505595:-1:exon

position:3504350:-1
position: 3504350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507783:-1
position: 3507783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507670-3507783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3504350-3505595:-1:exon

position:3505595:-1
position: 3505595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109934228
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109934228
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3550815..3558826)
location: region:3550815-3558826:-1
so has part: feature:3550815-3558826:-1:exon
subclass of: SO_0000010

109934228
type: Gene
SIO_000068: ncbigene

position:3550815:-1
position: 3550815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3558826:-1
position: 3558826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3550815-3558826:-1:exon

LOC109934228
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109934228
product: odorant receptor 131-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048604664.1
SIO_010081: LOC109934228
subclass of: SO_0000673
so part of: LOC109934228
location: complement(join(3550815..3551934,3558764..3558826))
location: region:3550815-3558826:-1
so has part: feature:3558764-3558826:-1:exon
so has part: feature:3550815-3551934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3558764-3558826:-1:exon

position:3558764:-1
position: 3558764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3550815-3551934:-1:exon

position:3551934:-1
position: 3551934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109934228
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109934228
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: odorant receptor 131-2-like
translation: MNSSNSSYHTLNMVKTSVYLTDFAVTAVCCHAIVSTVQHELELKREARFILLGHHLIYASIYFALGTLTNGFRLFSINSPRILCWILFVMQVTFAQCIMLTLTLMSLNTCLAICWPLRYKSLVDSAKNKITAIMWILAVQNPLWSIIYQSLNVSLADIIEKDNSCPSPMNGVASRYVGIAFVLLCFILIVLCYCLIYREGKRAGYFVTSNVQARKTILIHGLQLSFFIVPVLIAIGLGKKDSLTTLSLINTVIFSVAQCLSPVVYGLRCKELRNKLTKTKFCCCTFKTGKRNNYAFQQDVNLATAPVTDAHSSQVCHP
SIO_010081: LOC109934228
subclass of: SO_0000673
so part of: LOC109934228
location: complement(3550844..3551800)
location: region:3550844-3551800:-1
so has part: feature:3550844-3551800:-1:exon

XP_048460621.1
type: Protein
SIO_000068: ncbiprotein

position:3550844:-1
position: 3550844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3551800:-1
position: 3551800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3550844-3551800:-1:exon

LOC109929797
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109929797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3613421..3690989)
location: region:3613421-3690989:-1
so has part: feature:3613421-3690989:-1:exon
subclass of: SO_0000010

109929797
type: Gene
SIO_000068: ncbigene

position:3613421:-1
position: 3613421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690989:-1
position: 3690989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3613421-3690989:-1:exon

LOC109929797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109929797
product: F-box only protein 36, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048604691.1
SIO_010081: LOC109929797
subclass of: SO_0000673
so part of: LOC109929797
location: complement(join(3613421..3616333,3616617..3616688,3635894..3636066,3649467..3649575,3690652..3690989))
location: region:3613421-3690989:-1
so has part: feature:3690652-3690989:-1:exon
so has part: feature:3649467-3649575:-1:exon
so has part: feature:3635894-3636066:-1:exon
so has part: feature:3616617-3616688:-1:exon
so has part: feature:3613421-3616333:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3690652-3690989:-1:exon

position:3690652:-1
position: 3690652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3649467-3649575:-1:exon

position:3649467:-1
position: 3649467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3649575:-1
position: 3649575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3635894-3636066:-1:exon

position:3635894:-1
position: 3635894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3636066:-1
position: 3636066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3616617-3616688:-1:exon

position:3616617:-1
position: 3616617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3616688:-1
position: 3616688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3613421-3616333:-1:exon

position:3616333:-1
position: 3616333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109929797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109929797
product: F-box only protein 36, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 15 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_020529374.2
SIO_010081: LOC109929797
subclass of: SO_0000673
so part of: LOC109929797
location: complement(join(3613435..3616333,3635894..3636066,3649467..3649575,3690652..3690989))
location: region:3613435-3690989:-1
so has part: feature:3690652-3690989:-1:exon
so has part: feature:3649467-3649575:-1:exon
so has part: feature:3635894-3636066:-1:exon
so has part: feature:3613435-3616333:-1:exon

position:3613435:-1
position: 3613435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3690652-3690989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3649467-3649575:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3635894-3636066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3613435-3616333:-1:exon

LOC109929797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109929797
product: F-box only protein 36, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048604692.1
SIO_010081: LOC109929797
subclass of: SO_0000673
so part of: LOC109929797
location: complement(join(3613435..3616333,3616617..3616688,3635894..3636066,3659524..3659564,3690652..3690758))
location: region:3613435-3690758:-1
so has part: feature:3690652-3690758:-1:exon
so has part: feature:3659524-3659564:-1:exon
so has part: feature:3635894-3636066:-1:exon
so has part: feature:3616617-3616688:-1:exon
so has part: feature:3613435-3616333:-1:exon

position:3690758:-1
position: 3690758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3690652-3690758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3659524-3659564:-1:exon

position:3659524:-1
position: 3659524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3659564:-1
position: 3659564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3635894-3636066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3616617-3616688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3613435-3616333:-1:exon

LOC109929797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109929797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 36 isoform X2
translation: MASLLKGTLYEIRAQAPAPSKDYHQLLVTDSEVIWRWWKISLRREFRNVHPGEQINSHQDFLENYMLQVHIDVIFGNEVLKYICNLCQHHFDYLDRIPNGLLMYIILFLDLEDIARLSQTSRKFEKVCNSEELWERLVLRHCDTITPETRALASEVGWKEIFFTNKLQLQKKIRRRREKFGRIAENLPLTP
SIO_010081: LOC109929797
subclass of: SO_0000673
so part of: LOC109929797
location: complement(join(3616136..3616333,3635894..3636066,3649467..3649575,3690652..3690747))
location: region:3616136-3690747:-1
so has part: feature:3690652-3690747:-1:exon
so has part: feature:3649467-3649575:-1:exon
so has part: feature:3635894-3636066:-1:exon
so has part: feature:3616136-3616333:-1:exon

XP_020384963.1
type: Protein
SIO_000068: ncbiprotein

position:3616136:-1
position: 3616136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690747:-1
position: 3690747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3690652-3690747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3649467-3649575:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3635894-3636066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3616136-3616333:-1:exon

LOC109929797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109929797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 36 isoform X1
translation: MASLLKGTLYEIRAQAPAPSKDYHQLLVTDSEVIWRWWKISLRREFRNVHPGEQINSHQDFLENYMLQVHIDVIFGNEVLKYICNLCQHHFDYLDRIPNGLLMYIILFLDLEDIARLSQTSRKFEKHVPLSGTSVQLYKSCVQCQTDYPKVCNSEELWERLVLRHCDTITPETRALASEVGWKEIFFTNKLQLQKKIRRRREKFGRIAENLPLTP
SIO_010081: LOC109929797
subclass of: SO_0000673
so part of: LOC109929797
location: complement(join(3616136..3616333,3616617..3616688,3635894..3636066,3649467..3649575,3690652..3690747))
location: region:3616136-3690747:-1
so has part: feature:3690652-3690747:-1:exon
so has part: feature:3649467-3649575:-1:exon
so has part: feature:3635894-3636066:-1:exon
so has part: feature:3616617-3616688:-1:exon
so has part: feature:3616136-3616333:-1:exon

XP_048460648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3690652-3690747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3649467-3649575:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3635894-3636066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3616617-3616688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3616136-3616333:-1:exon

LOC109929797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109929797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 36 isoform X3
translation: MGGKMFQVAVHIDVIFGNEVLKYICNLCQHHFDYLDRIPNGLLMYIILFLDLEDIARLSQTSRKFEKHVPLSGTSVQLYKSCVQCQTDYPKVCNSEELWERLVLRHCDTITPETRALASEVGWKEIFFTNKLQLQKKIRRRREKFGRIAENLPLTP
SIO_010081: LOC109929797
subclass of: SO_0000673
so part of: LOC109929797
location: complement(join(3616136..3616333,3616617..3616688,3635894..3636066,3659524..3659551))
location: region:3616136-3659551:-1
so has part: feature:3659524-3659551:-1:exon
so has part: feature:3635894-3636066:-1:exon
so has part: feature:3616617-3616688:-1:exon
so has part: feature:3616136-3616333:-1:exon

XP_048460649.1
type: Protein
SIO_000068: ncbiprotein

position:3659551:-1
position: 3659551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3659524-3659551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3635894-3636066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3616617-3616688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3616136-3616333:-1:exon

trip12
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trip12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3753132..3848811)
location: region:3753132-3848811:-1
so has part: feature:3753132-3848811:-1:exon
subclass of: SO_0000010

109929798
type: Gene
SIO_000068: ncbigene

position:3753132:-1
position: 3753132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3848811:-1
position: 3848811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3753132-3848811:-1:exon

trip12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: trip12
product: thyroid hormone receptor interactor 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048604482.1
SIO_010081: trip12
subclass of: SO_0000673
so part of: trip12
location: complement(join(3753132..3753377,3755908..3756049,3758617..3758791,3760948..3761048,3767159..3767357,3767525..3767643,3769428..3769656,3771959..3772112,3772828..3772984,3779320..3779437,3780406..3780571,3785693..3785761,3787738..3787899,3789694..3789786,3792404..3792499,3792587..3792622,3794307..3794458,3797142..3797237,3800675..3800758,3803120..3803250,3808977..3809082,3810376..3811196,3812704..3812817,3813319..3813465,3848735..3848811))
location: region:3753132-3848811:-1
so has part: feature:3848735-3848811:-1:exon
so has part: feature:3813319-3813465:-1:exon
so has part: feature:3812704-3812817:-1:exon
so has part: feature:3810376-3811196:-1:exon
so has part: feature:3808977-3809082:-1:exon
so has part: feature:3803120-3803250:-1:exon
so has part: feature:3800675-3800758:-1:exon
so has part: feature:3797142-3797237:-1:exon
so has part: feature:3794307-3794458:-1:exon
so has part: feature:3792587-3792622:-1:exon
so has part: feature:3792404-3792499:-1:exon
so has part: feature:3789694-3789786:-1:exon
so has part: feature:3787738-3787899:-1:exon
so has part: feature:3785693-3785761:-1:exon
so has part: feature:3780406-3780571:-1:exon
so has part: feature:3779320-3779437:-1:exon
so has part: feature:3772828-3772984:-1:exon
so has part: feature:3771959-3772112:-1:exon
so has part: feature:3769428-3769656:-1:exon
so has part: feature:3767525-3767643:-1:exon
so has part: feature:3767159-3767357:-1:exon
so has part: feature:3760948-3761048:-1:exon
so has part: feature:3758617-3758791:-1:exon
so has part: feature:3755908-3756049:-1:exon
so has part: feature:3753132-3753377:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3848735-3848811:-1:exon

position:3848735:-1
position: 3848735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3813319-3813465:-1:exon

position:3813319:-1
position: 3813319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3813465:-1
position: 3813465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3812704-3812817:-1:exon

position:3812704:-1
position: 3812704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3812817:-1
position: 3812817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3810376-3811196:-1:exon

position:3810376:-1
position: 3810376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3811196:-1
position: 3811196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3808977-3809082:-1:exon

position:3808977:-1
position: 3808977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3809082:-1
position: 3809082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3803120-3803250:-1:exon

position:3803120:-1
position: 3803120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3803250:-1
position: 3803250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3800675-3800758:-1:exon

position:3800675:-1
position: 3800675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3800758:-1
position: 3800758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3797142-3797237:-1:exon

position:3797142:-1
position: 3797142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3797237:-1
position: 3797237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3794307-3794458:-1:exon

position:3794307:-1
position: 3794307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3794458:-1
position: 3794458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3792587-3792622:-1:exon

position:3792587:-1
position: 3792587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3792622:-1
position: 3792622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3792404-3792499:-1:exon

position:3792404:-1
position: 3792404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3792499:-1
position: 3792499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3789694-3789786:-1:exon

position:3789694:-1
position: 3789694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3789786:-1
position: 3789786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3787738-3787899:-1:exon

position:3787738:-1
position: 3787738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3787899:-1
position: 3787899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3785693-3785761:-1:exon

position:3785693:-1
position: 3785693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3785761:-1
position: 3785761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3780406-3780571:-1:exon

position:3780406:-1
position: 3780406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780571:-1
position: 3780571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3779320-3779437:-1:exon

position:3779320:-1
position: 3779320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3779437:-1
position: 3779437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3772828-3772984:-1:exon

position:3772828:-1
position: 3772828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772984:-1
position: 3772984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3771959-3772112:-1:exon

position:3771959:-1
position: 3771959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772112:-1
position: 3772112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3769428-3769656:-1:exon

position:3769428:-1
position: 3769428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3769656:-1
position: 3769656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3767525-3767643:-1:exon

position:3767525:-1
position: 3767525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3767643:-1
position: 3767643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3767159-3767357:-1:exon

position:3767159:-1
position: 3767159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3767357:-1
position: 3767357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3760948-3761048:-1:exon

position:3760948:-1
position: 3760948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3761048:-1
position: 3761048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3758617-3758791:-1:exon

position:3758617:-1
position: 3758617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3758791:-1
position: 3758791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3755908-3756049:-1:exon

position:3755908:-1
position: 3755908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3756049:-1
position: 3756049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3753132-3753377:-1:exon

position:3753377:-1
position: 3753377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trip12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: trip12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIP12
translation: MSNRPNYNTGGSLRRSQRNTAGAQPQDEATGGRSQSEETKQKPIPSRPTSKAPKLQPDTTSGQSRGRVSRRNSRSCSSSSVASVTQQDDRIRSERPKTGQTKRDGSRSSLRGVKRGPSPDYSSSNSTCSAKRPKALQPSENPTETQKHKLQTRSPKKRKSVQDQIRTAPAASTSKAQSRKQTGPVSASPFQKRKKIESTTCVNSDSVADSISAEERSAKPTKLASKSATSAKAGCSTVTDSSSSSASTSSSSSATVSGAVPQGARLKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSSKFEWAARFSPKVSLPKAKLSLPGSSKSETSKPGPSGLQAKLASLRRSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGASEARRQEKMADPDNNQDGANSSRTEDVPQGASASSSVAGAVGMPTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLRFLLCGASSGGCQEQIDLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGSAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNNGGHSETRKDDARAQLMREDPDLAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDFKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESETLLTSPPKACSSGIGTLGTAATISTTNVASNTVADLGSPSFQSMDDSLDLSPQGRLSDVLKRKRLPKRVTRRTKYSPPRDDEKVDNQAKSPTATQSPKSSFLASLNPKTWGRLSTQSNSNNAEPARTAGVSGIARVTPKDTMSNNREKIKVWIKEQAHKFVDRYFTSENVDASNPALNVLQRLCSATEQLSLQVDGGIECLLDIRSIVSESDVSSFEIQHSGFVKQLLLYLTSRSDKDLVNRNVRLRRFLHVFYGCPVSNFWFQNMQFLLIVYY
SIO_010081: trip12
subclass of: SO_0000673
so part of: trip12
location: complement(join(3753132..3753377,3755908..3756049,3758617..3758791,3760948..3761048,3767159..3767357,3767525..3767643,3769428..3769656,3771959..3772112,3772828..3772984,3779320..3779437,3780406..3780571,3785693..3785761,3787738..3787899,3789694..3789786,3792404..3792499,3792587..3792622,3794307..3794458,3797142..3797237,3800675..3800758,3803120..3803250,3808977..3809082,3810376..3811196,3812704..3812817,3813319..3813416))
location: region:3753132-3813416:-1
so has part: feature:3813319-3813416:-1:exon
so has part: feature:3812704-3812817:-1:exon
so has part: feature:3810376-3811196:-1:exon
so has part: feature:3808977-3809082:-1:exon
so has part: feature:3803120-3803250:-1:exon
so has part: feature:3800675-3800758:-1:exon
so has part: feature:3797142-3797237:-1:exon
so has part: feature:3794307-3794458:-1:exon
so has part: feature:3792587-3792622:-1:exon
so has part: feature:3792404-3792499:-1:exon
so has part: feature:3789694-3789786:-1:exon
so has part: feature:3787738-3787899:-1:exon
so has part: feature:3785693-3785761:-1:exon
so has part: feature:3780406-3780571:-1:exon
so has part: feature:3779320-3779437:-1:exon
so has part: feature:3772828-3772984:-1:exon
so has part: feature:3771959-3772112:-1:exon
so has part: feature:3769428-3769656:-1:exon
so has part: feature:3767525-3767643:-1:exon
so has part: feature:3767159-3767357:-1:exon
so has part: feature:3760948-3761048:-1:exon
so has part: feature:3758617-3758791:-1:exon
so has part: feature:3755908-3756049:-1:exon
so has part: feature:3753132-3753377:-1:exon

XP_048460439.1
type: Protein
SIO_000068: ncbiprotein

position:3813416:-1
position: 3813416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3813319-3813416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3812704-3812817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3810376-3811196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3808977-3809082:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3803120-3803250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3800675-3800758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3797142-3797237:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3794307-3794458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3792587-3792622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3792404-3792499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3789694-3789786:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3787738-3787899:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3785693-3785761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3780406-3780571:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3779320-3779437:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3772828-3772984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3771959-3772112:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3769428-3769656:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3767525-3767643:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3767159-3767357:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3760948-3761048:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3758617-3758791:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3755908-3756049:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3753132-3753377:-1:exon

LOC125484669
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3862268..3914915
location: region:3862268-3914915:1
so has part: feature:3862268-3914915:1:exon
subclass of: SO_0000010

125484669
type: Gene
SIO_000068: ncbigene

position:3862268:1
position: 3862268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3914915:1
position: 3914915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3862268-3914915:1:exon

LOC125484669
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484669
product: E3 ubiquitin-protein ligase TRIP12-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604234.1
SIO_010081: LOC125484669
subclass of: SO_0000673
so part of: LOC125484669
location: join(3862268..3862439,3863136..3863293,3866161..3866234,3873152..3873351,3874365..3874492,3877697..3877848,3880625..3880767,3882120..3882276,3884208..3884306,3884443..3884557,3885568..3885722,3893329..3893493,3897230..3897394,3905208..3905321,3909121..3909215,3911287..3911390,3913483..3914915)
location: region:3862268-3914915:1
so has part: feature:3862268-3862439:1:exon
so has part: feature:3863136-3863293:1:exon
so has part: feature:3866161-3866234:1:exon
so has part: feature:3873152-3873351:1:exon
so has part: feature:3874365-3874492:1:exon
so has part: feature:3877697-3877848:1:exon
so has part: feature:3880625-3880767:1:exon
so has part: feature:3882120-3882276:1:exon
so has part: feature:3884208-3884306:1:exon
so has part: feature:3884443-3884557:1:exon
so has part: feature:3885568-3885722:1:exon
so has part: feature:3893329-3893493:1:exon
so has part: feature:3897230-3897394:1:exon
so has part: feature:3905208-3905321:1:exon
so has part: feature:3909121-3909215:1:exon
so has part: feature:3911287-3911390:1:exon
so has part: feature:3913483-3914915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3862268-3862439:1:exon

position:3862439:1
position: 3862439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3863136-3863293:1:exon

position:3863136:1
position: 3863136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3863293:1
position: 3863293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3866161-3866234:1:exon

position:3866161:1
position: 3866161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3866234:1
position: 3866234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3873152-3873351:1:exon

position:3873152:1
position: 3873152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3873351:1
position: 3873351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3874365-3874492:1:exon

position:3874365:1
position: 3874365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3874492:1
position: 3874492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3877697-3877848:1:exon

position:3877697:1
position: 3877697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3877848:1
position: 3877848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3880625-3880767:1:exon

position:3880625:1
position: 3880625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3880767:1
position: 3880767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3882120-3882276:1:exon

position:3882120:1
position: 3882120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3882276:1
position: 3882276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3884208-3884306:1:exon

position:3884208:1
position: 3884208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3884306:1
position: 3884306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3884443-3884557:1:exon

position:3884443:1
position: 3884443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3884557:1
position: 3884557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3885568-3885722:1:exon

position:3885568:1
position: 3885568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3885722:1
position: 3885722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3893329-3893493:1:exon

position:3893329:1
position: 3893329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3893493:1
position: 3893493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3897230-3897394:1:exon

position:3897230:1
position: 3897230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3897394:1
position: 3897394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3905208-3905321:1:exon

position:3905208:1
position: 3905208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3905321:1
position: 3905321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3909121-3909215:1:exon

position:3909121:1
position: 3909121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3909215:1
position: 3909215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3911287-3911390:1:exon

position:3911287:1
position: 3911287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3911390:1
position: 3911390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3913483-3914915:1:exon

position:3913483:1
position: 3913483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484669
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484669
product: E3 ubiquitin-protein ligase TRIP12-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604235.1
SIO_010081: LOC125484669
subclass of: SO_0000673
so part of: LOC125484669
location: join(3862268..3862439,3863136..3863293,3866161..3866234,3873152..3873351,3874365..3874492,3877697..3877848,3880625..3880767,3882120..3882276,3884208..3884306,3884443..3884557,3885568..3885722,3893329..3893493,3897251..3897394,3905208..3905321,3909121..3909215,3911287..3911390,3913483..3914915)
location: region:3862268-3914915:1
so has part: feature:3862268-3862439:1:exon
so has part: feature:3863136-3863293:1:exon
so has part: feature:3866161-3866234:1:exon
so has part: feature:3873152-3873351:1:exon
so has part: feature:3874365-3874492:1:exon
so has part: feature:3877697-3877848:1:exon
so has part: feature:3880625-3880767:1:exon
so has part: feature:3882120-3882276:1:exon
so has part: feature:3884208-3884306:1:exon
so has part: feature:3884443-3884557:1:exon
so has part: feature:3885568-3885722:1:exon
so has part: feature:3893329-3893493:1:exon
so has part: feature:3897251-3897394:1:exon
so has part: feature:3905208-3905321:1:exon
so has part: feature:3909121-3909215:1:exon
so has part: feature:3911287-3911390:1:exon
so has part: feature:3913483-3914915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3862268-3862439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3863136-3863293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3866161-3866234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3873152-3873351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3874365-3874492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3877697-3877848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3880625-3880767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3882120-3882276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3884208-3884306:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3884443-3884557:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3885568-3885722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3893329-3893493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3897251-3897394:1:exon

position:3897251:1
position: 3897251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3905208-3905321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3909121-3909215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3911287-3911390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3913483-3914915:1:exon

LOC125484669
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIP12-like isoform X1
translation: MNNCLSQMEQFPVKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPDSTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQFSVQADDERESTDDESNPLGRAGIWTKTHTIWYKPVREEEEGTKDTVGGKRGRAQTAPTKTSPRNARKHDELWHDGVCPPVGNPLETYLLSGPPDGITFEDPSLDVILLLRVLHAISRYWYYLYNNAVCKEIIPTNELINSKLTAKANRQLQDPLVIMTGNIPIWLTELGRTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGDEVTLSHPKGSQEGTRYIHNPRGLFPVPFGRNTKPAHVAKVKMKLRFLGKFLAKAIMDFRLLDLPLSLSFYKWMLRQEISLCSHDLFNIDPVVAKSICHLEDIIKQKKKLEQDRSQSKECLQQALESLNMNGCSVEDLGLDFTLPGYASVELKKGGKDTVVTIHNLEEYLRLVVYWTLNEGVSKQFESFRDGFESVFPLHHLQYFYPEELDQLLCGSKSEAWDVKTLMECCRPDHGYNHDSRAVKFLFEILSSFDGEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIDIMREKLLIAAREGQQSFHLS
SIO_010081: LOC125484669
subclass of: SO_0000673
so part of: LOC125484669
location: join(3862360..3862439,3863136..3863293,3866161..3866234,3873152..3873351,3874365..3874492,3877697..3877848,3880625..3880767,3882120..3882276,3884208..3884306,3884443..3884557,3885568..3885722,3893329..3893493,3897230..3897394,3905208..3905321,3909121..3909215,3911287..3911390,3913483..3913679)
location: region:3862360-3913679:1
so has part: feature:3862360-3862439:1:exon
so has part: feature:3863136-3863293:1:exon
so has part: feature:3866161-3866234:1:exon
so has part: feature:3873152-3873351:1:exon
so has part: feature:3874365-3874492:1:exon
so has part: feature:3877697-3877848:1:exon
so has part: feature:3880625-3880767:1:exon
so has part: feature:3882120-3882276:1:exon
so has part: feature:3884208-3884306:1:exon
so has part: feature:3884443-3884557:1:exon
so has part: feature:3885568-3885722:1:exon
so has part: feature:3893329-3893493:1:exon
so has part: feature:3897230-3897394:1:exon
so has part: feature:3905208-3905321:1:exon
so has part: feature:3909121-3909215:1:exon
so has part: feature:3911287-3911390:1:exon
so has part: feature:3913483-3913679:1:exon

XP_048460191.1
type: Protein
SIO_000068: ncbiprotein

position:3862360:1
position: 3862360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3913679:1
position: 3913679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3862360-3862439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3863136-3863293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3866161-3866234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3873152-3873351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3874365-3874492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3877697-3877848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3880625-3880767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3882120-3882276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3884208-3884306:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3884443-3884557:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3885568-3885722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3893329-3893493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3897230-3897394:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3905208-3905321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3909121-3909215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3911287-3911390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3913483-3913679:1:exon

LOC125484669
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIP12-like isoform X2
translation: MNNCLSQMEQFPVKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPDSTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQFSVQADDERESTDDESNPLGRAGIWTKTHTIWYKPVREEEEGTKDTVGGKRGRAQTAPTKTSPRNARKHDELWHDGVCPPVGNPLETYLLSGPPDGITFEDPSLDVILLLRVLHAISRYWYYLYNNAVCKEIIPTNELINSKLTAKANRQLQDPLVIMTGNIPIWLTELGRTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGDEVTLSHPKGSQEGTRYIHNPRGLFPVPFGRNTKPAHVAKVKMKLRFLGKFLAKAIMDFRLLDLPLSLSFYKWMLRQEISLCSHDLFNIDPVVAKSICHLEDIIKQKKKLEQDRSQALESLNMNGCSVEDLGLDFTLPGYASVELKKGGKDTVVTIHNLEEYLRLVVYWTLNEGVSKQFESFRDGFESVFPLHHLQYFYPEELDQLLCGSKSEAWDVKTLMECCRPDHGYNHDSRAVKFLFEILSSFDGEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIDIMREKLLIAAREGQQSFHLS
SIO_010081: LOC125484669
subclass of: SO_0000673
so part of: LOC125484669
location: join(3862360..3862439,3863136..3863293,3866161..3866234,3873152..3873351,3874365..3874492,3877697..3877848,3880625..3880767,3882120..3882276,3884208..3884306,3884443..3884557,3885568..3885722,3893329..3893493,3897251..3897394,3905208..3905321,3909121..3909215,3911287..3911390,3913483..3913679)
location: region:3862360-3913679:1
so has part: feature:3862360-3862439:1:exon
so has part: feature:3863136-3863293:1:exon
so has part: feature:3866161-3866234:1:exon
so has part: feature:3873152-3873351:1:exon
so has part: feature:3874365-3874492:1:exon
so has part: feature:3877697-3877848:1:exon
so has part: feature:3880625-3880767:1:exon
so has part: feature:3882120-3882276:1:exon
so has part: feature:3884208-3884306:1:exon
so has part: feature:3884443-3884557:1:exon
so has part: feature:3885568-3885722:1:exon
so has part: feature:3893329-3893493:1:exon
so has part: feature:3897251-3897394:1:exon
so has part: feature:3905208-3905321:1:exon
so has part: feature:3909121-3909215:1:exon
so has part: feature:3911287-3911390:1:exon
so has part: feature:3913483-3913679:1:exon

XP_048460192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3862360-3862439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3863136-3863293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3866161-3866234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3873152-3873351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3874365-3874492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3877697-3877848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3880625-3880767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3882120-3882276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3884208-3884306:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3884443-3884557:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3885568-3885722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3893329-3893493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3897251-3897394:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3905208-3905321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3909121-3909215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3911287-3911390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3913483-3913679:1:exon

LOC109938423
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109938423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4016814..4017758)
location: region:4016814-4017758:-1
so has part: feature:4016814-4017758:-1:exon
subclass of: SO_0000010

109938423
type: Gene
SIO_000068: ncbigene

position:4016814:-1
position: 4016814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4017758:-1
position: 4017758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4016814-4017758:-1:exon

LOC109938423
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109938423
product: probable G-protein coupled receptor 148
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins
transcript id: XM_020536831.1
SIO_010081: LOC109938423
subclass of: SO_0000673
so part of: LOC109938423
location: complement(4016814..4017758)
location: region:4016814-4017758:-1
so has part: feature:4016814-4017758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4016814-4017758:-1:exon

LOC109938423
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109938423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 148
translation: MLNASFNGTAKYLHCPSWVLLLPEAICLLFTLLCSGAMLDTIFRVSAVRKEPRHLLLASLLISDLVYLLLVMITTVMWAAIISIPTVLCLINYLLVFSSFISGFFTVTAMAVDKYIAICWPLHYRSLCTSGKTQKAIALIWLLATLHPLVCLLMLLGAGTPPLVIESFRCLFPPVQGGILETAFALFQVQQAVLALTFLASAVTIVFCYCMIYKEARQTSPKVRARNTVLLHGLQLFLYFIPVANYIVYSNLVKNTSIKVQVMAQLHLINISLFSVLPRCLCPVVFGLRASQLYLHVKRRLFNQNQVAPLPDST
SIO_010081: LOC109938423
subclass of: SO_0000673
so part of: LOC109938423
location: complement(4016814..4017758)
location: region:4016814-4017758:-1
so has part: feature:4016814-4017758:-1:exon

XP_020392420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4016814-4017758:-1:exon

pid1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pid1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4254017..4324602
location: region:4254017-4324602:1
so has part: feature:4254017-4324602:1:exon
subclass of: SO_0000010

109923066
type: Gene
SIO_000068: ncbigene

position:4254017:1
position: 4254017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4324602:1
position: 4324602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4254017-4324602:1:exon

pid1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pid1
product: phosphotyrosine interaction domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604743.1
SIO_010081: pid1
subclass of: SO_0000673
so part of: pid1
location: join(4254017..4254164,4322267..4324602)
location: region:4254017-4324602:1
so has part: feature:4254017-4254164:1:exon
so has part: feature:4322267-4324602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4254017-4254164:1:exon

position:4254164:1
position: 4254164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4322267-4324602:1:exon

position:4322267:1
position: 4322267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pid1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pid1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PTB-containing, cubilin and LRP1-interacting protein
translation: MLKTKLNVLTLRKETLPTVIFHEPEAIELSPTAPPKNGPFYTERKVRYLGKVIMRGTQFTSGCTERSVIELWEKQTLDQEDISSANAILEIRPFQVRLHHLDGKREVTVQTDTFQVARIAYCTADHHVSANIFAWLYREINDDLSYQIDCHAVECGSKLEAKKLAHTMMEAFKKTFSSMKSDGQIHNSNSSEEVKSATSDDG
SIO_010081: pid1
subclass of: SO_0000673
so part of: pid1
location: join(4254030..4254164,4322267..4322740)
location: region:4254030-4322740:1
so has part: feature:4254030-4254164:1:exon
so has part: feature:4322267-4322740:1:exon

XP_048460700.1
type: Protein
SIO_000068: ncbiprotein

position:4254030:1
position: 4254030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4322740:1
position: 4322740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4254030-4254164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4322267-4322740:1:exon

LOC109917976
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109917976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4449991..4474105
location: region:4449991-4474105:1
so has part: feature:4449991-4474105:1:exon
subclass of: SO_0000010

109917976
type: Gene
SIO_000068: ncbigene

position:4449991:1
position: 4449991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4474105:1
position: 4474105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4449991-4474105:1:exon

LOC109917976
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109917976
product: rhodopsin kinase grk7-a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020517872.2
SIO_010081: LOC109917976
subclass of: SO_0000673
so part of: LOC109917976
location: join(4449991..4450590,4452889..4453326,4468660..4468931,4473573..4474105)
location: region:4449991-4474105:1
so has part: feature:4449991-4450590:1:exon
so has part: feature:4452889-4453326:1:exon
so has part: feature:4468660-4468931:1:exon
so has part: feature:4473573-4474105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4449991-4450590:1:exon

position:4450590:1
position: 4450590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4452889-4453326:1:exon

position:4452889:1
position: 4452889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4453326:1
position: 4453326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4468660-4468931:1:exon

position:4468660:1
position: 4468660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4468931:1
position: 4468931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4473573-4474105:1:exon

position:4473573:1
position: 4473573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109917976
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109917976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhodopsin kinase grk7-a
translation: MCDMGALENLIANTVYLQARSVDGDFREMKKKRQSLALPSHQQSASVRQNIDIAFESICERQPIGKKLFHMFTATVPDYQGAVDFVNEVTDFYLAENGVKDNLRQNIVTNFLKPDSKNYLSFLSQGLADKCKDATEKDFEELLPRAQTEAKVFLTGQPFQDFQNSPFFTKFLQWKAFERQPITEKYFYQFRVLGKGGFGEVCAIQVKTTGKMYACKQLDKKRLKKKHGEQMTLLEKEILEKANSPFIVSLAYACESKNYLCLVMTLMNGGDLKFHIYNIGERGIEMKRTIFYAAQITCGILHLHSMKVVYRDMKPENVLLDDNGNCRISDLGLAIKVKDGKSINQMAGTNGYMAPEILKEENYKYSVDWFALGCSIYEMIAGRAPFKDYKEKVSKDEVKRRTLEDAESYENPKFTEESKDICKLFLAKNSEERLGCRSENDDPRNHPFFKSINFQRLEAGLIDPPFVPDPSTVYCKDIGDIADFSEIKGVEITDQDTQFYKKFSTGAVTIPWQEEIIESGLFDDLNDPSRQKAGDMANGSGEGKTGVCVLL
SIO_010081: LOC109917976
subclass of: SO_0000673
so part of: LOC109917976
location: join(4449991..4450590,4452889..4453326,4468660..4468931,4473573..4473918)
location: region:4449991-4473918:1
so has part: feature:4449991-4450590:1:exon
so has part: feature:4452889-4453326:1:exon
so has part: feature:4468660-4468931:1:exon
so has part: feature:4473573-4473918:1:exon

XP_020373461.1
type: Protein
SIO_000068: ncbiprotein

position:4473918:1
position: 4473918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4449991-4450590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4452889-4453326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4468660-4468931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4473573-4473918:1:exon

LOC125484698
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4491730..4501495)
location: region:4491730-4501495:-1
so has part: feature:4491730-4501495:-1:exon
subclass of: SO_0000010

125484698
type: Gene
SIO_000068: ncbigene

position:4491730:-1
position: 4491730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4501495:-1
position: 4501495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4491730-4501495:-1:exon

LOC125484698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484698
product: putative protein TPRXL
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048604483.1
SIO_010081: LOC125484698
subclass of: SO_0000673
so part of: LOC125484698
location: complement(join(4491730..4492217,4492622..4492688,4493420..4493474,4493868..4493966,4494225..4494292,4494554..4494607,4501226..4501495))
location: region:4491730-4501495:-1
so has part: feature:4501226-4501495:-1:exon
so has part: feature:4494554-4494607:-1:exon
so has part: feature:4494225-4494292:-1:exon
so has part: feature:4493868-4493966:-1:exon
so has part: feature:4493420-4493474:-1:exon
so has part: feature:4492622-4492688:-1:exon
so has part: feature:4491730-4492217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4501226-4501495:-1:exon

position:4501226:-1
position: 4501226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4494554-4494607:-1:exon

position:4494554:-1
position: 4494554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4494607:-1
position: 4494607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4494225-4494292:-1:exon

position:4494225:-1
position: 4494225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4494292:-1
position: 4494292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4493868-4493966:-1:exon

position:4493868:-1
position: 4493868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4493966:-1
position: 4493966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4493420-4493474:-1:exon

position:4493420:-1
position: 4493420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4493474:-1
position: 4493474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4492622-4492688:-1:exon

position:4492622:-1
position: 4492622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4492688:-1
position: 4492688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4491730-4492217:-1:exon

position:4492217:-1
position: 4492217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein TPRXL
translation: MTGRHGRDNGQIRQSYQVDTAETLGRYSRDDKQMRQSYWADMAEILGRSSRDDKQMRRTYWADTAEITGRYSGDMADILDKYGGDDRQMPTSSSLSSSTSSSLSSSTSSTSSSSLSSSTSSSLSSSTSSSLSTSSSSMSSSTTSSSMSSSTSSSSLSSSTSSSLSTTPSSMSSSTSSSSLSSCHVCAANGSLPLGDSSYIPEFSESSLGLGHVALTFNSQSPKWGTPATSNPVWSRDRGQVRSRDSGKGPNVERGQGPSVEQGQGPSAEQGQRTGAQCGAGTAERGPVRSRGRGPVWSGDGGPVRSGDSGPVRSGDRGSVRSGDRGSVQSGDSGQGPSAEQGQGPSAERGQGPSAERMGAASGQTT
SIO_010081: LOC125484698
subclass of: SO_0000673
so part of: LOC125484698
location: complement(join(4491730..4492217,4492622..4492688,4493420..4493474,4493868..4493966,4494225..4494292,4494554..4494607,4501226..4501495))
location: region:4491730-4501495:-1
so has part: feature:4501226-4501495:-1:exon
so has part: feature:4494554-4494607:-1:exon
so has part: feature:4494225-4494292:-1:exon
so has part: feature:4493868-4493966:-1:exon
so has part: feature:4493420-4493474:-1:exon
so has part: feature:4492622-4492688:-1:exon
so has part: feature:4491730-4492217:-1:exon

XP_048460440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4501226-4501495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4494554-4494607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4494225-4494292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493868-4493966:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493420-4493474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4492622-4492688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4491730-4492217:-1:exon

LOC109917977
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109917977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4501832..4558562
location: region:4501832-4558562:1
so has part: feature:4501832-4558562:1:exon
subclass of: SO_0000010

109917977
type: Gene
SIO_000068: ncbigene

position:4501832:1
position: 4501832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4558562:1
position: 4558562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4501832-4558562:1:exon

LOC109917977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109917977
product: sodium/potassium-transporting ATPase subunit beta-3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020517874.2
SIO_010081: LOC109917977
subclass of: SO_0000673
so part of: LOC109917977
location: join(4501832..4502310,4521741..4521869,4537752..4537859,4537942..4538135,4538220..4538276,4556753..4556830,4557845..4558562)
location: region:4501832-4558562:1
so has part: feature:4501832-4502310:1:exon
so has part: feature:4521741-4521869:1:exon
so has part: feature:4537752-4537859:1:exon
so has part: feature:4537942-4538135:1:exon
so has part: feature:4538220-4538276:1:exon
so has part: feature:4556753-4556830:1:exon
so has part: feature:4557845-4558562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4501832-4502310:1:exon

position:4502310:1
position: 4502310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4521741-4521869:1:exon

position:4521741:1
position: 4521741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4521869:1
position: 4521869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4537752-4537859:1:exon

position:4537752:1
position: 4537752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4537859:1
position: 4537859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4537942-4538135:1:exon

position:4537942:1
position: 4537942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4538135:1
position: 4538135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4538220-4538276:1:exon

position:4538220:1
position: 4538220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4538276:1
position: 4538276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4556753-4556830:1:exon

position:4556753:1
position: 4556753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4556830:1
position: 4556830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4557845-4558562:1:exon

position:4557845:1
position: 4557845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109917977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109917977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-3-like
translation: MADKDAKKDFEEAEGGWKQFIYNPGTGQFMGRTASSWALIFLFYLVFYGFLAGLFSFTMWVMLQMLDEYTPKYRDRVSSPGLMIRPKVGSSLEIVFNKSDSKSYEKYVTALDGFLRPYDDLIQAQKNIHCRPGEYLIQPDNILEKKACQFNRTTLGECSGKNNSSFGYNEGKPCVLVKMNRIIGLEAGGGSNPVVNCTSKKEPQVDIKYFGSFDKMYYPYYGKKAHVNYSQPLVAVKLMLDTNDTYKDLMIECKITGTNLKNDDDRDRFLGRVAFRVHVTE
SIO_010081: LOC109917977
subclass of: SO_0000673
so part of: LOC109917977
location: join(4502199..4502310,4521741..4521869,4537752..4537859,4537942..4538135,4538220..4538276,4556753..4556830,4557845..4558012)
location: region:4502199-4558012:1
so has part: feature:4502199-4502310:1:exon
so has part: feature:4521741-4521869:1:exon
so has part: feature:4537752-4537859:1:exon
so has part: feature:4537942-4538135:1:exon
so has part: feature:4538220-4538276:1:exon
so has part: feature:4556753-4556830:1:exon
so has part: feature:4557845-4558012:1:exon

XP_020373463.1
type: Protein
SIO_000068: ncbiprotein

position:4502199:1
position: 4502199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4558012:1
position: 4558012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4502199-4502310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4521741-4521869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4537752-4537859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4537942-4538135:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4538220-4538276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4556753-4556830:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4557845-4558012:1:exon

LOC109932287
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4577537..4766760)
location: region:4577537-4766760:-1
so has part: feature:4577537-4766760:-1:exon
subclass of: SO_0000010

109932287
type: Gene
SIO_000068: ncbigene

position:4577537:-1
position: 4577537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4766760:-1
position: 4766760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4577537-4766760:-1:exon

LOC109932287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932287
product: transcription factor Dp-2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604636.1
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4577537..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4718586..4718652,4766592..4766760))
location: region:4577537-4766760:-1
so has part: feature:4766592-4766760:-1:exon
so has part: feature:4718586-4718652:-1:exon
so has part: feature:4649740-4649843:-1:exon
so has part: feature:4633673-4633794:-1:exon
so has part: feature:4621940-4621987:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4577537-4579682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4766592-4766760:-1:exon

position:4766592:-1
position: 4766592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4718586-4718652:-1:exon

position:4718586:-1
position: 4718586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4718652:-1
position: 4718652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4649740-4649843:-1:exon

position:4649740:-1
position: 4649740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4649843:-1
position: 4649843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4633673-4633794:-1:exon

position:4633673:-1
position: 4633673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4633794:-1
position: 4633794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4621940-4621987:-1:exon

position:4621940:-1
position: 4621940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4621987:-1
position: 4621987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4609000-4609162:-1:exon

position:4609000:-1
position: 4609000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4609162:-1
position: 4609162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4606463-4606609:-1:exon

position:4606463:-1
position: 4606463
reference: sequence
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position:4606609:-1
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urn:…
SIO_000300: 8
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position:4596810:-1
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urn:…
SIO_000300: 9
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position:4593518:-1
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urn:…
SIO_000300: 10
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position:4592081:-1
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urn:…
SIO_000300: 11
SIO_000628: feature:4581751-4581850:-1:exon

position:4581751:-1
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reference: sequence
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position:4581850:-1
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urn:…
SIO_000300: 12
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position:4579682:-1
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reference: sequence
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LOC109932287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932287
product: transcription factor Dp-2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604638.1
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4577537..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4633673..4633794,4649740..4649843,4718586..4718652,4734257..4734377,4766592..4766760))
location: region:4577537-4766760:-1
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urn:…
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urn:…
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position:4734377:-1
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4577537-4579682:-1:exon

LOC109932287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932287
product: transcription factor Dp-2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604635.1
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4577537..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606606,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4718586..4718652,4734257..4734377,4766592..4766760))
location: region:4577537-4766760:-1
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so has part: feature:4577537-4579682:-1:exon

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:4606463-4606606:-1:exon

position:4606606:-1
position: 4606606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4577537-4579682:-1:exon

LOC109932287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932287
product: transcription factor Dp-2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604634.1
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4577537..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4718586..4718652,4734257..4734377,4766592..4766760))
location: region:4577537-4766760:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:4766592-4766760:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4577537-4579682:-1:exon

LOC109932287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932287
product: transcription factor Dp-2, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604643.1
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4577537..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4718586..4718636))
location: region:4577537-4718636:-1
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so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
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so has part: feature:4581751-4581850:-1:exon
so has part: feature:4577537-4579682:-1:exon

position:4718636:-1
position: 4718636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4718586-4718636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4633673-4633794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4577537-4579682:-1:exon

LOC109932287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932287
product: transcription factor Dp-2, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604639.1
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4577537..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4690885..4690977))
location: region:4577537-4690977:-1
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so has part: feature:4577537-4579682:-1:exon

position:4690977:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:4690885-4690977:-1:exon

position:4690885:-1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4577537-4579682:-1:exon

LOC109932287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932287
product: transcription factor Dp-2, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604641.1
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4577537..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4675502..4675522))
location: region:4577537-4675522:-1
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so has part: feature:4581751-4581850:-1:exon
so has part: feature:4577537-4579682:-1:exon

position:4675522:-1
position: 4675522
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:4675502-4675522:-1:exon

position:4675502:-1
position: 4675502
reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:4649740-4649843:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4577537-4579682:-1:exon

LOC109932287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932287
product: transcription factor Dp-2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604637.1
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4577537..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4660176..4660594))
location: region:4577537-4660594:-1
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so has part: feature:4581751-4581850:-1:exon
so has part: feature:4577537-4579682:-1:exon

position:4660594:-1
position: 4660594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4660176-4660594:-1:exon

position:4660176:-1
position: 4660176
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:4649740-4649843:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4577537-4579682:-1:exon

LOC109932287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109932287
product: transcription factor Dp-2, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604642.1
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4577537..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4635441..4635532))
location: region:4577537-4635532:-1
so has part: feature:4635441-4635532:-1:exon
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so has part: feature:4596742-4596810:-1:exon
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so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4577537-4579682:-1:exon

position:4635532:-1
position: 4635532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4635441-4635532:-1:exon

position:4635441:-1
position: 4635441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4633673-4633794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4577537-4579682:-1:exon

LOC109932287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2 isoform X3
translation: MVAIINTNGDLKGYTDQNLFPVKDSISMVAASVSNIVSQTKILPKTLGLANVNVAPQMIISTPQRLSNSGSVLIGSPYTPTPAMVTQSHITDPSGWVTGSRKRTHEFIESDFSDNKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSNSSTHMSSDSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSAQEFQNLEVEKQRRIERIKQKRAQLEELILQQIAFKNLVQRNRQSEQQTQSPPAPNSTIQLPFIIVNTSKRTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCTPENLKTANSLVPKVLQPYVAEMADGSSWANKEVPTDLMQTASALSTSASISQSSMTPGLSLDVEVALATGHLLAPESRHSSSITSHYESRGETPCSFNDDDEDDDDDEDDCSSLVEGD
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4579487..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4718586..4718652,4766592..4766594))
location: region:4579487-4766594:-1
so has part: feature:4766592-4766594:-1:exon
so has part: feature:4718586-4718652:-1:exon
so has part: feature:4649740-4649843:-1:exon
so has part: feature:4633673-4633794:-1:exon
so has part: feature:4621940-4621987:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4579487-4579682:-1:exon

XP_048460593.1
type: Protein
SIO_000068: ncbiprotein

position:4579487:-1
position: 4579487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4766594:-1
position: 4766594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4766592-4766594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4718586-4718652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4649740-4649843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4633673-4633794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4579487-4579682:-1:exon

LOC109932287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2 isoform X5
translation: MAKHVAIINTNGDLKGYTDQNLFPVKDSISMVAASVSNIVSQTKILPKTLGLANVNVAPQMIISTPQRLSNSGSVLIGSPYTPTPAMVTQSHITDPSGWVTGKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSNSSTHMSSDSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSAQEFQNLEVEKQRRIERIKQKRAQLEELILQQIAFKNLVQRNRQSEQQTQSPPAPNSTIQLPFIIVNTSKRTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCTPENLKTANSLVPKVLQPYVAEMADGSSWANKEVPTDLMQTASALSTSASISQSSMTPGLSLDVEVALATGHLLAPESRHSSSITSHYESRGETPCSFNDDDEDDDDDEDDCSSLVEGD
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4579487..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4633673..4633794,4649740..4649843,4718586..4718652,4734257..4734268))
location: region:4579487-4734268:-1
so has part: feature:4734257-4734268:-1:exon
so has part: feature:4718586-4718652:-1:exon
so has part: feature:4649740-4649843:-1:exon
so has part: feature:4633673-4633794:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4579487-4579682:-1:exon

XP_048460595.1
type: Protein
SIO_000068: ncbiprotein

position:4734268:-1
position: 4734268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4734257-4734268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4718586-4718652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4649740-4649843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4633673-4633794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4579487-4579682:-1:exon

LOC109932287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2 isoform X2
translation: MAKHVAIINTNGDLKGYTDQNLFPVKDSISMVAASVSNIVSQTKILPKTLGLANVNVAPQMIISTPQRLSNSGSVLIGSPYTPTPAMVTQSHITDPSGWVTGSRKRTHEFIESDFSDNKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSNSSTHMSSDSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSAQEFQNLEVEKQRRIERIKQKRAQLEELILQQIAFKNLVQRNRQSEQQTQSPPAPNSTIQLPFIIVNTSKRTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCTPENLKTANSLVPKVLQPYVAEMADGSSWANKEVPTDLMQTASALSTSASISQSSMTPGLSLDVEVALATGHLLAPESRHSSSITSHYESRGETPCSFNDDDEDDDDDEDDCSSLVEGD
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4579487..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606606,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4718586..4718652,4734257..4734268))
location: region:4579487-4734268:-1
so has part: feature:4734257-4734268:-1:exon
so has part: feature:4718586-4718652:-1:exon
so has part: feature:4649740-4649843:-1:exon
so has part: feature:4633673-4633794:-1:exon
so has part: feature:4621940-4621987:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606606:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4579487-4579682:-1:exon

XP_048460592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4734257-4734268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4718586-4718652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4649740-4649843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4633673-4633794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4606463-4606606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4579487-4579682:-1:exon

LOC109932287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2 isoform X1
translation: MAKHVAIINTNGDLKGYTDQNLFPVKDSISMVAASVSNIVSQTKILPKTLGLANVNVAPQMIISTPQRLSNSGSVLIGSPYTPTPAMVTQSHITDPSGWVTGSRKRTHEFIESDFSDNKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSNSSTHMSSDSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSAQEFQNLEVEKQRRIERIKQKRAQLEELILQQIAFKNLVQRNRQSEQQTQSPPAPNSTIQLPFIIVNTSKRTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCTPENLKTANSLVPKVLQPYVAEMADGSSWANKEVPTDLMQTASALSTSASISQSSMTPGLSLDVEVALATGHLLAPESRHSSSITSHYESRGETPCSFNDDDEDDDDDEDDCSSLVEGD
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4579487..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4718586..4718652,4734257..4734268))
location: region:4579487-4734268:-1
so has part: feature:4734257-4734268:-1:exon
so has part: feature:4718586-4718652:-1:exon
so has part: feature:4649740-4649843:-1:exon
so has part: feature:4633673-4633794:-1:exon
so has part: feature:4621940-4621987:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4579487-4579682:-1:exon

XP_048460591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4734257-4734268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4718586-4718652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4649740-4649843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4633673-4633794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4579487-4579682:-1:exon

LOC109932287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2 isoform X4
translation: MEPIPRGWARIEDNSISMVAASVSNIVSQTKILPKTLGLANVNVAPQMIISTPQRLSNSGSVLIGSPYTPTPAMVTQSHITDPSGWVTGSRKRTHEFIESDFSDNKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSNSSTHMSSDSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSAQEFQNLEVEKQRRIERIKQKRAQLEELILQQIAFKNLVQRNRQSEQQTQSPPAPNSTIQLPFIIVNTSKRTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCTPENLKTANSLVPKVLQPYVAEMADGSSWANKEVPTDLMQTASALSTSASISQSSMTPGLSLDVEVALATGHLLAPESRHSSSITSHYESRGETPCSFNDDDEDDDDDEDDCSSLVEGD
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4579487..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649843,4660176..4660215))
location: region:4579487-4660215:-1
so has part: feature:4660176-4660215:-1:exon
so has part: feature:4649740-4649843:-1:exon
so has part: feature:4633673-4633794:-1:exon
so has part: feature:4621940-4621987:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4579487-4579682:-1:exon

XP_048460594.1
type: Protein
SIO_000068: ncbiprotein

position:4660215:-1
position: 4660215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4660176-4660215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4649740-4649843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4633673-4633794:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4579487-4579682:-1:exon

LOC109932287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2 isoform X6
translation: MVAASVSNIVSQTKILPKTLGLANVNVAPQMIISTPQRLSNSGSVLIGSPYTPTPAMVTQSHITDPSGWVTGSRKRTHEFIESDFSDNKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSNSSTHMSSDSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSAQEFQNLEVEKQRRIERIKQKRAQLEELILQQIAFKNLVQRNRQSEQQTQSPPAPNSTIQLPFIIVNTSKRTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCTPENLKTANSLVPKVLQPYVAEMADGSSWANKEVPTDLMQTASALSTSASISQSSMTPGLSLDVEVALATGHLLAPESRHSSSITSHYESRGETPCSFNDDDEDDDDDEDDCSSLVEGD
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4579487..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649832))
location: region:4579487-4649832:-1
so has part: feature:4649740-4649832:-1:exon
so has part: feature:4633673-4633794:-1:exon
so has part: feature:4621940-4621987:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4579487-4579682:-1:exon

XP_048460596.1
type: Protein
SIO_000068: ncbiprotein

position:4649832:-1
position: 4649832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4649740-4649832:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4633673-4633794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4579487-4579682:-1:exon

LOC109932287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2 isoform X6
translation: MVAASVSNIVSQTKILPKTLGLANVNVAPQMIISTPQRLSNSGSVLIGSPYTPTPAMVTQSHITDPSGWVTGSRKRTHEFIESDFSDNKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSNSSTHMSSDSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSAQEFQNLEVEKQRRIERIKQKRAQLEELILQQIAFKNLVQRNRQSEQQTQSPPAPNSTIQLPFIIVNTSKRTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCTPENLKTANSLVPKVLQPYVAEMADGSSWANKEVPTDLMQTASALSTSASISQSSMTPGLSLDVEVALATGHLLAPESRHSSSITSHYESRGETPCSFNDDDEDDDDDEDDCSSLVEGD
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4579487..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633794,4649740..4649832))
location: region:4579487-4649832:-1
so has part: feature:4649740-4649832:-1:exon
so has part: feature:4633673-4633794:-1:exon
so has part: feature:4621940-4621987:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4579487-4579682:-1:exon

XP_048460598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4649740-4649832:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4633673-4633794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4579487-4579682:-1:exon

LOC109932287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2 isoform X7
translation: MVTQSHITDPSGWVTGSRKRTHEFIESDFSDNKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSNSSTHMSSDSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSAQEFQNLEVEKQRRIERIKQKRAQLEELILQQIAFKNLVQRNRQSEQQTQSPPAPNSTIQLPFIIVNTSKRTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCTPENLKTANSLVPKVLQPYVAEMADGSSWANKEVPTDLMQTASALSTSASISQSSMTPGLSLDVEVALATGHLLAPESRHSSSITSHYESRGETPCSFNDDDEDDDDDEDDCSSLVEGD
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4579487..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633719))
location: region:4579487-4633719:-1
so has part: feature:4633673-4633719:-1:exon
so has part: feature:4621940-4621987:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4579487-4579682:-1:exon

XP_048460599.1
type: Protein
SIO_000068: ncbiprotein

position:4633719:-1
position: 4633719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4633673-4633719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4579487-4579682:-1:exon

LOC109932287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109932287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2 isoform X7
translation: MVTQSHITDPSGWVTGSRKRTHEFIESDFSDNKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSNSSTHMSSDSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLPTNSAQEFQNLEVEKQRRIERIKQKRAQLEELILQQIAFKNLVQRNRQSEQQTQSPPAPNSTIQLPFIIVNTSKRTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCTPENLKTANSLVPKVLQPYVAEMADGSSWANKEVPTDLMQTASALSTSASISQSSMTPGLSLDVEVALATGHLLAPESRHSSSITSHYESRGETPCSFNDDDEDDDDDEDDCSSLVEGD
SIO_010081: LOC109932287
subclass of: SO_0000673
so part of: LOC109932287
location: complement(join(4579487..4579682,4581751..4581850,4591915..4592081,4593367..4593518,4596742..4596810,4606463..4606609,4609000..4609162,4621940..4621987,4633673..4633719))
location: region:4579487-4633719:-1
so has part: feature:4633673-4633719:-1:exon
so has part: feature:4621940-4621987:-1:exon
so has part: feature:4609000-4609162:-1:exon
so has part: feature:4606463-4606609:-1:exon
so has part: feature:4596742-4596810:-1:exon
so has part: feature:4593367-4593518:-1:exon
so has part: feature:4591915-4592081:-1:exon
so has part: feature:4581751-4581850:-1:exon
so has part: feature:4579487-4579682:-1:exon

XP_048460600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4633673-4633719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4621940-4621987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4609000-4609162:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4606463-4606609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4596742-4596810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4593367-4593518:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4591915-4592081:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4581751-4581850:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4579487-4579682:-1:exon

gk5
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: gk5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4778130..4856723)
location: region:4778130-4856723:-1
so has part: feature:4778130-4856723:-1:exon
subclass of: SO_0000010

109932294
type: Gene
SIO_000068: ncbigene

position:4778130:-1
position: 4778130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4856723:-1
position: 4856723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4778130-4856723:-1:exon

gk5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gk5
product: glycerol kinase 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604484.1
SIO_010081: gk5
subclass of: SO_0000673
so part of: gk5
location: complement(join(4778130..4780597,4782046..4782179,4782395..4782454,4784618..4784721,4792795..4792931,4811334..4811409,4816703..4816834,4828709..4828802,4831624..4831699,4843700..4843793,4856170..4856723))
location: region:4778130-4856723:-1
so has part: feature:4856170-4856723:-1:exon
so has part: feature:4843700-4843793:-1:exon
so has part: feature:4831624-4831699:-1:exon
so has part: feature:4828709-4828802:-1:exon
so has part: feature:4816703-4816834:-1:exon
so has part: feature:4811334-4811409:-1:exon
so has part: feature:4792795-4792931:-1:exon
so has part: feature:4784618-4784721:-1:exon
so has part: feature:4782395-4782454:-1:exon
so has part: feature:4782046-4782179:-1:exon
so has part: feature:4778130-4780597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4856170-4856723:-1:exon

position:4856170:-1
position: 4856170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4843700-4843793:-1:exon

position:4843700:-1
position: 4843700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4843793:-1
position: 4843793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4831624-4831699:-1:exon

position:4831624:-1
position: 4831624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4831699:-1
position: 4831699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4828709-4828802:-1:exon

position:4828709:-1
position: 4828709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4828802:-1
position: 4828802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4816703-4816834:-1:exon

position:4816703:-1
position: 4816703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4816834:-1
position: 4816834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4811334-4811409:-1:exon

position:4811334:-1
position: 4811334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4811409:-1
position: 4811409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4792795-4792931:-1:exon

position:4792795:-1
position: 4792795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4792931:-1
position: 4792931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4784618-4784721:-1:exon

position:4784618:-1
position: 4784618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4784721:-1
position: 4784721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4782395-4782454:-1:exon

position:4782395:-1
position: 4782395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4782454:-1
position: 4782454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4782046-4782179:-1:exon

position:4782046:-1
position: 4782046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4782179:-1
position: 4782179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4778130-4780597:-1:exon

position:4780597:-1
position: 4780597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gk5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gk5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative glycerol kinase 5
translation: MGSVRNGLRRTDTYVLAVDVGSTSVRCHVYDPAAKIKGSSSRPIKMLYPKPGWVEVNPDEMFEQFVAVVKEAVEDSGLHMKQMAALGISTQRATFVTWDKTTGRPFHNFICWQDLRAVDLVRSWNKSLLLWVVHKSSGLLHFLTRKKRFLAASVIHFSTQHVSIRLAWVLQNIKQVQDAVAEENCSFGTIDTWLLYKLTKETQFILLHLVLSFPGLFSDVAETEKMAQEVQSTDGVFFVPSFSGLQAPLNDPNACASFMGLKPSTTKIHLVRAILESIAYRNKQLYDTMLKEIHIPITCIRADGGICSNQFVMQLTTDLLACDIEKPKRVDMSSLGAAFLAGLANGYWGSREELKTIRSVEKIYKPQDVLHDYKSIIENWELAVSRSMHWYTKTKQE
SIO_010081: gk5
subclass of: SO_0000673
so part of: gk5
location: complement(join(4780440..4780597,4782046..4782179,4782395..4782454,4784618..4784721,4792795..4792931,4811334..4811409,4816703..4816834,4828709..4828802,4831624..4831699,4843700..4843793,4856170..4856298))
location: region:4780440-4856298:-1
so has part: feature:4856170-4856298:-1:exon
so has part: feature:4843700-4843793:-1:exon
so has part: feature:4831624-4831699:-1:exon
so has part: feature:4828709-4828802:-1:exon
so has part: feature:4816703-4816834:-1:exon
so has part: feature:4811334-4811409:-1:exon
so has part: feature:4792795-4792931:-1:exon
so has part: feature:4784618-4784721:-1:exon
so has part: feature:4782395-4782454:-1:exon
so has part: feature:4782046-4782179:-1:exon
so has part: feature:4780440-4780597:-1:exon

XP_048460441.1
type: Protein
SIO_000068: ncbiprotein

position:4780440:-1
position: 4780440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4856298:-1
position: 4856298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4856170-4856298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4843700-4843793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4831624-4831699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4828709-4828802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4816703-4816834:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4811334-4811409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4792795-4792931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4784618-4784721:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4782395-4782454:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4782046-4782179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4780440-4780597:-1:exon

LOC125484666
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4860509..4908355)
location: region:4860509-4908355:-1
so has part: feature:4860509-4908355:-1:exon
subclass of: SO_0000010

125484666
type: Gene
SIO_000068: ncbigene

position:4860509:-1
position: 4860509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4908355:-1
position: 4908355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4860509-4908355:-1:exon

LOC125484666
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484666
product: 5'-3' exoribonuclease 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604228.1
SIO_010081: LOC125484666
subclass of: SO_0000673
so part of: LOC125484666
location: complement(join(4860509..4861210,4865603..4865919,4869391..4869548,4870370..4870481,4870633..4870746,4876172..4876335,4879930..4880098,4887375..4887512,4888929..4889006,4889301..4889398,4893330..4893471,4894467..4894607,4895219..4895350,4896594..4896816,4897174..4897243,4903296..4903428,4906657..4906713,4907667..4907802,4908269..4908355))
location: region:4860509-4908355:-1
so has part: feature:4908269-4908355:-1:exon
so has part: feature:4907667-4907802:-1:exon
so has part: feature:4906657-4906713:-1:exon
so has part: feature:4903296-4903428:-1:exon
so has part: feature:4897174-4897243:-1:exon
so has part: feature:4896594-4896816:-1:exon
so has part: feature:4895219-4895350:-1:exon
so has part: feature:4894467-4894607:-1:exon
so has part: feature:4893330-4893471:-1:exon
so has part: feature:4889301-4889398:-1:exon
so has part: feature:4888929-4889006:-1:exon
so has part: feature:4887375-4887512:-1:exon
so has part: feature:4879930-4880098:-1:exon
so has part: feature:4876172-4876335:-1:exon
so has part: feature:4870633-4870746:-1:exon
so has part: feature:4870370-4870481:-1:exon
so has part: feature:4869391-4869548:-1:exon
so has part: feature:4865603-4865919:-1:exon
so has part: feature:4860509-4861210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4908269-4908355:-1:exon

position:4908269:-1
position: 4908269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4907667-4907802:-1:exon

position:4907667:-1
position: 4907667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4907802:-1
position: 4907802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4906657-4906713:-1:exon

position:4906657:-1
position: 4906657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4906713:-1
position: 4906713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4903296-4903428:-1:exon

position:4903296:-1
position: 4903296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4903428:-1
position: 4903428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4897174-4897243:-1:exon

position:4897174:-1
position: 4897174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4897243:-1
position: 4897243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4896594-4896816:-1:exon

position:4896594:-1
position: 4896594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4896816:-1
position: 4896816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4895219-4895350:-1:exon

position:4895219:-1
position: 4895219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4895350:-1
position: 4895350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4894467-4894607:-1:exon

position:4894467:-1
position: 4894467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4894607:-1
position: 4894607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4893330-4893471:-1:exon

position:4893330:-1
position: 4893330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4893471:-1
position: 4893471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4889301-4889398:-1:exon

position:4889301:-1
position: 4889301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4889398:-1
position: 4889398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4888929-4889006:-1:exon

position:4888929:-1
position: 4888929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4889006:-1
position: 4889006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4887375-4887512:-1:exon

position:4887375:-1
position: 4887375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4887512:-1
position: 4887512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4879930-4880098:-1:exon

position:4879930:-1
position: 4879930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4880098:-1
position: 4880098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4876172-4876335:-1:exon

position:4876172:-1
position: 4876172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4876335:-1
position: 4876335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4870633-4870746:-1:exon

position:4870633:-1
position: 4870633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4870746:-1
position: 4870746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4870370-4870481:-1:exon

position:4870370:-1
position: 4870370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4870481:-1
position: 4870481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4869391-4869548:-1:exon

position:4869391:-1
position: 4869391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4869548:-1
position: 4869548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4865603-4865919:-1:exon

position:4865603:-1
position: 4865603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4865919:-1
position: 4865919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4860509-4861210:-1:exon

position:4861210:-1
position: 4861210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484666
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exoribonuclease 1-like
translation: MHPVSSLSRASCDLNLLDAAIIEKIEEEVERCKQRRSNKKVRVTVKPHLLYRPLEQQHGIVPDKDAEYLLFDRVVNVREDFSVPVGLRGTIIGMKGAERESDESYEVLFDEEFPSGLTIRCSPSRGYRLPKCALINLSYGNRLEFGGQKAAPLLKPQPAPIPQHAMYPSSQSGAQKVSTGGLNHSPRSLFVPTQQLNGRQPFLRAENQKNHVNHQRANGPSNFHQNDENQRQGGSAKPGQLKSDDEFSTVWQSLHNNLGTSSHSIQTNSRSTDLPTKHSSVWQEKAVTEPASFSGFQSKNSNPTENKMQPFKIDGQQKQKWGPSEQQACARKAKEDNSESFKARSRGPENSGQSQPSVSKLQNKQACSSNSKPSMKILRRNEDSKEQKSAVVPSEFEEPLVSLKSPGQQGGKDVQVSQSTESERITGEPLSPQSFAMKGTQMLKEILKIDGTSATPQKEINISSNTKLESFQTSTTLHEKPGYTPHQRPVKKLAAQINKPQGSQSGDLSGHYQGRQQPPLSTSVSELFTICARIGLPHPDFSFMRTPQGLTVCQVKLANGLLVHGPQCQSDSDAQEKAAAFALQRLNATGQNVPLPPNMFSSYQPVAGAVPSPVIPPSFGQTPGGMMPTAPNGYGPMPWTTLIPPPLYNSFQIPYSGNICPGGVLIGTHNQFVPLQVTKRRTSFNKTYDDKEYNHSIQQKLNQPPTTMDFSNASSHGYPSGSTSRNFFQPGRIPLESQNKAIVQTSVQPQGQQRPVAGSSGKRKHRKLAVNFGASRLPQ
SIO_010081: LOC125484666
subclass of: SO_0000673
so part of: LOC125484666
location: complement(join(4865608..4865919,4869391..4869548,4870370..4870481,4870633..4870746,4876172..4876335,4879930..4880098,4887375..4887512,4888929..4889006,4889301..4889398,4893330..4893471,4894467..4894607,4895219..4895350,4896594..4896816,4897174..4897243,4903296..4903428,4906657..4906713,4907667..4907765))
location: region:4865608-4907765:-1
so has part: feature:4907667-4907765:-1:exon
so has part: feature:4906657-4906713:-1:exon
so has part: feature:4903296-4903428:-1:exon
so has part: feature:4897174-4897243:-1:exon
so has part: feature:4896594-4896816:-1:exon
so has part: feature:4895219-4895350:-1:exon
so has part: feature:4894467-4894607:-1:exon
so has part: feature:4893330-4893471:-1:exon
so has part: feature:4889301-4889398:-1:exon
so has part: feature:4888929-4889006:-1:exon
so has part: feature:4887375-4887512:-1:exon
so has part: feature:4879930-4880098:-1:exon
so has part: feature:4876172-4876335:-1:exon
so has part: feature:4870633-4870746:-1:exon
so has part: feature:4870370-4870481:-1:exon
so has part: feature:4869391-4869548:-1:exon
so has part: feature:4865608-4865919:-1:exon

XP_048460185.1
type: Protein
SIO_000068: ncbiprotein

position:4865608:-1
position: 4865608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4907765:-1
position: 4907765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4907667-4907765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4906657-4906713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4903296-4903428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4897174-4897243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4896594-4896816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4895219-4895350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4894467-4894607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4893330-4893471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4889301-4889398:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4888929-4889006:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4887375-4887512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4879930-4880098:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4876172-4876335:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4870633-4870746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4870370-4870481:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4869391-4869548:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4865608-4865919:-1:exon

atr
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: atr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <4939173..4990806
location: region:4939173-4990806:1
so has part: feature:4939173-4990806:1:exon
subclass of: SO_0000010

109934427
type: Gene
SIO_000068: ncbigene

position:4939173:1
position: 4939173
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:4990806:1
position: 4990806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4939173-4990806:1:exon

atr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: atr
product: ATR serine/threonine kinase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020533204.2
SIO_010081: atr
subclass of: SO_0000673
so part of: atr
location: join(<4939173..4939391,4940492..4940677,4943143..4943235,4943315..4943445,4946658..4946801,4948771..4948864,4949364..4949489,4949793..4949999,4952297..4952410,4953771..4953886,4954308..4954428,4954999..4955136,4956665..4956872,4959019..4959197,4960621..4960785,4961674..4961765,4962788..4962879,4964928..4965105,4965193..4965378,4966128..4966287,4970126..4970308,4970989..4971131,4973166..4973263,4973366..4973604,4975968..4976102,4976757..4976957,4980540..4980683,4981862..4982012,4983449..4983605,4984083..4984236,4986782..4986933,4987086..4987191,4987793..4990806)
location: region:4939173-4990806:1
so has part: feature:4939173-4939391:1:exon
so has part: feature:4940492-4940677:1:exon
so has part: feature:4943143-4943235:1:exon
so has part: feature:4943315-4943445:1:exon
so has part: feature:4946658-4946801:1:exon
so has part: feature:4948771-4948864:1:exon
so has part: feature:4949364-4949489:1:exon
so has part: feature:4949793-4949999:1:exon
so has part: feature:4952297-4952410:1:exon
so has part: feature:4953771-4953886:1:exon
so has part: feature:4954308-4954428:1:exon
so has part: feature:4954999-4955136:1:exon
so has part: feature:4956665-4956872:1:exon
so has part: feature:4959019-4959197:1:exon
so has part: feature:4960621-4960785:1:exon
so has part: feature:4961674-4961765:1:exon
so has part: feature:4962788-4962879:1:exon
so has part: feature:4964928-4965105:1:exon
so has part: feature:4965193-4965378:1:exon
so has part: feature:4966128-4966287:1:exon
so has part: feature:4970126-4970308:1:exon
so has part: feature:4970989-4971131:1:exon
so has part: feature:4973166-4973263:1:exon
so has part: feature:4973366-4973604:1:exon
so has part: feature:4975968-4976102:1:exon
so has part: feature:4976757-4976957:1:exon
so has part: feature:4980540-4980683:1:exon
so has part: feature:4981862-4982012:1:exon
so has part: feature:4983449-4983605:1:exon
so has part: feature:4984083-4984236:1:exon
so has part: feature:4986782-4986933:1:exon
so has part: feature:4987086-4987191:1:exon
so has part: feature:4987793-4990806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4939173-4939391:1:exon

position:4939391:1
position: 4939391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4940492-4940677:1:exon

position:4940492:1
position: 4940492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4940677:1
position: 4940677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4943143-4943235:1:exon

position:4943143:1
position: 4943143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4943235:1
position: 4943235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4943315-4943445:1:exon

position:4943315:1
position: 4943315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4943445:1
position: 4943445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4946658-4946801:1:exon

position:4946658:1
position: 4946658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4946801:1
position: 4946801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4948771-4948864:1:exon

position:4948771:1
position: 4948771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4948864:1
position: 4948864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4949364-4949489:1:exon

position:4949364:1
position: 4949364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4949489:1
position: 4949489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4949793-4949999:1:exon

position:4949793:1
position: 4949793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4949999:1
position: 4949999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4952297-4952410:1:exon

position:4952297:1
position: 4952297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4952410:1
position: 4952410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4953771-4953886:1:exon

position:4953771:1
position: 4953771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4953886:1
position: 4953886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4954308-4954428:1:exon

position:4954308:1
position: 4954308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4954428:1
position: 4954428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4954999-4955136:1:exon

position:4954999:1
position: 4954999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4955136:1
position: 4955136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4956665-4956872:1:exon

position:4956665:1
position: 4956665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4956872:1
position: 4956872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4959019-4959197:1:exon

position:4959019:1
position: 4959019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4959197:1
position: 4959197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4960621-4960785:1:exon

position:4960621:1
position: 4960621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4960785:1
position: 4960785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4961674-4961765:1:exon

position:4961674:1
position: 4961674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4961765:1
position: 4961765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4962788-4962879:1:exon

position:4962788:1
position: 4962788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4962879:1
position: 4962879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4964928-4965105:1:exon

position:4964928:1
position: 4964928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4965105:1
position: 4965105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4965193-4965378:1:exon

position:4965193:1
position: 4965193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4965378:1
position: 4965378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4966128-4966287:1:exon

position:4966128:1
position: 4966128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4966287:1
position: 4966287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4970126-4970308:1:exon

position:4970126:1
position: 4970126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4970308:1
position: 4970308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4970989-4971131:1:exon

position:4970989:1
position: 4970989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4971131:1
position: 4971131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4973166-4973263:1:exon

position:4973166:1
position: 4973166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4973263:1
position: 4973263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4973366-4973604:1:exon

position:4973366:1
position: 4973366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4973604:1
position: 4973604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4975968-4976102:1:exon

position:4975968:1
position: 4975968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4976102:1
position: 4976102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4976757-4976957:1:exon

position:4976757:1
position: 4976757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4976957:1
position: 4976957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4980540-4980683:1:exon

position:4980540:1
position: 4980540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4980683:1
position: 4980683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4981862-4982012:1:exon

position:4981862:1
position: 4981862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4982012:1
position: 4982012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4983449-4983605:1:exon

position:4983449:1
position: 4983449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4983605:1
position: 4983605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4984083-4984236:1:exon

position:4984083:1
position: 4984083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4984236:1
position: 4984236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4986782-4986933:1:exon

position:4986782:1
position: 4986782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4986933:1
position: 4986933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4987086-4987191:1:exon

position:4987086:1
position: 4987086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4987191:1
position: 4987191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4987793-4990806:1:exon

position:4987793:1
position: 4987793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

atr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: atr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase ATR
translation: CKLHFVFQRTLQSLLPYLAAKSSTTSSLLIRTIAKQLNVNRREILINNFKYIFSHLVCSCSKDELERGLHYLQNETELELGSLLRQDFQGLHNELLLRIGEHYQQVFNGLAILAASASRNDQCQAPRDITSAELMADYLQPKLLGILAFFNMHLLSSSVGMNDKMMAMNSLMSLMKLMGPKHISSVRVKMMTTLRTGLRYRDEFPQLCCRAWDCFVRCLDPSYLGALLSQVIVALLPLMSIQPKETTGIFRYLIVENRAEVKDFLHEIYFLPEHPDFTEIQKVLQDYRKETSKSTDLQTELQLSMRAVQHENVDVRIHALTSLKDTLFKKQDQLVKLATDSETVEPIISQLVMVLLKGCQDANAQARLLCGECLGELGAIDPGRLDLMTSNTEGKSSTFVAGVEDPNFAHHLLIELTRAFLAYADNVRAQDSAAYAIQELLQIYKCKEGKTDCPGRRLWRSFPEHVQEILEPHLNTRYKSSQKTCNWVNIKKPFYLGKHDRNFAEWSATWAGYLTTKVRSELARKVFDCCSFIMKHDFKVTIYLLPHILVYVLLGCNEEDQREVYSEMMAVLKNDETLDRTLQDSASDLSQLSTQTVFSMLDHLAQWSRHKLQALSSEKSGSRSSKDRGGPNVSSSEYKEYQNVTSFLDLIPQDALAVASFRSKAYTRAVMHFESFITEKKENIQQHLGFLQKLYAAMHEPDGVAGVSAIRKGERSLREQILEHESSGLLRDATACYDRAIQLEPDEIIHYHGLMKSMLGLGQLSTVITQVNGVLASRPEWTSELNTYRVEAAWKLTHWELLQNYVAAEGKSCSWSVRLGQLLLVAKQSNAEGFYEQLQVTRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEHSVRGLLHWESRKHQKEHEHPLNWQARLEMTQNSFRAKEPILALRRALLHVNKTTDYSELVGECWLQSARVARKAGHHQTAYNALLNAGESKLPELYIERAKWLWSKGDVHQALIVLQKGVELCFGDTETEMSDDKSCLIKGKAVLLVGRFMEETANFESNAVMKKYKEVTTLLPDWEDGHFYLAKYYDKLMPMVTDNKIEKQGDLIRYIVLHFGTSLRFGNQFIYQSMPRMLSLWLDYGAKAYELEKAPGRTADRIAMRTDLEKINKVIEDHTNHLAPYQFLTAFSQLISRICHFHDDVFARLKGIIVKVFLAYPQQAMWMMTAVCKSSYATRVTRCKEILQKAINDKSCFGKFIGDATRLTEKLLELCNKSVDGNTTTLSMSVHFKLLKRLVEEPAFSEILIPLQSVMTPTLPSTAGTHANHDPFPGHWAYIAGFDDMVEILASLQKPKKINLKGSDGKSYIMMCKPKDDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIPLNEECGLVEWVNNTAGLRHILNKLYKEKGVYMIGKELRQCMLPKQAPLEEKLSVFKQQLLPRHPAVFHEWFLRTFPDPTSWYSSRSAYCRSVAVMSMVGYILGLGDRHGENILFDSLTGECVHVDFNCLFNKGETFDVPEVVPFRLTHNMVHAMGPMGTEGLFRRACEVTLRLMRDQREPLMSVLKTFLHDPLVEWSKPVKGSTKVQPNETGEVINEKAKTHVQDIEKRLHGVIKTRNKVKGLPLSIEGHVHYLIQEATNINLLCQMYLGWAPYM
SIO_010081: atr
subclass of: SO_0000673
so part of: atr
location: join(<4939173..4939391,4940492..4940677,4943143..4943235,4943315..4943445,4946658..4946801,4948771..4948864,4949364..4949489,4949793..4949999,4952297..4952410,4953771..4953886,4954308..4954428,4954999..4955136,4956665..4956872,4959019..4959197,4960621..4960785,4961674..4961765,4962788..4962879,4964928..4965105,4965193..4965378,4966128..4966287,4970126..4970308,4970989..4971131,4973166..4973263,4973366..4973604,4975968..4976102,4976757..4976957,4980540..4980683,4981862..4982012,4983449..4983605,4984083..4984236,4986782..4986933,4987086..4987191,4987793..4987966)
location: region:4939173-4987966:1
so has part: feature:4939173-4939391:1:exon
so has part: feature:4940492-4940677:1:exon
so has part: feature:4943143-4943235:1:exon
so has part: feature:4943315-4943445:1:exon
so has part: feature:4946658-4946801:1:exon
so has part: feature:4948771-4948864:1:exon
so has part: feature:4949364-4949489:1:exon
so has part: feature:4949793-4949999:1:exon
so has part: feature:4952297-4952410:1:exon
so has part: feature:4953771-4953886:1:exon
so has part: feature:4954308-4954428:1:exon
so has part: feature:4954999-4955136:1:exon
so has part: feature:4956665-4956872:1:exon
so has part: feature:4959019-4959197:1:exon
so has part: feature:4960621-4960785:1:exon
so has part: feature:4961674-4961765:1:exon
so has part: feature:4962788-4962879:1:exon
so has part: feature:4964928-4965105:1:exon
so has part: feature:4965193-4965378:1:exon
so has part: feature:4966128-4966287:1:exon
so has part: feature:4970126-4970308:1:exon
so has part: feature:4970989-4971131:1:exon
so has part: feature:4973166-4973263:1:exon
so has part: feature:4973366-4973604:1:exon
so has part: feature:4975968-4976102:1:exon
so has part: feature:4976757-4976957:1:exon
so has part: feature:4980540-4980683:1:exon
so has part: feature:4981862-4982012:1:exon
so has part: feature:4983449-4983605:1:exon
so has part: feature:4984083-4984236:1:exon
so has part: feature:4986782-4986933:1:exon
so has part: feature:4987086-4987191:1:exon
so has part: feature:4987793-4987966:1:exon

XP_020388793.2
type: Protein
SIO_000068: ncbiprotein

position:4987966:1
position: 4987966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4939173-4939391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4940492-4940677:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4943143-4943235:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4943315-4943445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4946658-4946801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4948771-4948864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4949364-4949489:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4949793-4949999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4952297-4952410:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4953771-4953886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4954308-4954428:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4954999-4955136:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4956665-4956872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4959019-4959197:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4960621-4960785:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4961674-4961765:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4962788-4962879:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4964928-4965105:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4965193-4965378:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4966128-4966287:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4970126-4970308:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4970989-4971131:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4973166-4973263:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4973366-4973604:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4975968-4976102:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4976757-4976957:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4980540-4980683:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4981862-4982012:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4983449-4983605:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4984083-4984236:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4986782-4986933:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4987086-4987191:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4987793-4987966:1:exon

xrn1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: xrn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5006585..5060736
location: region:5006585-5060736:1
so has part: feature:5006585-5060736:1:exon
subclass of: SO_0000010

109934425
type: Gene
SIO_000068: ncbigene

position:5006585:1
position: 5006585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5060736:1
position: 5060736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5006585-5060736:1:exon

xrn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: xrn1
product: 5'-3' exoribonuclease 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_048604485.1
SIO_010081: xrn1
subclass of: SO_0000673
so part of: xrn1
location: join(5006585..5006817,5015202..5015299,5019581..5019690,5020379..5020489,5021366..5021451,5021765..5021852,5023420..5023588,5023711..5023778,5024319..5024450,5030325..5030415,5030999..5031119,5032144..5032233,5034085..5034241,5036944..5037063,5037793..5037962,5038090..5038210,5040476..5040565,5040969..5041072,5049249..5049380,5050501..5050663,5052931..5053044,5056694..5056792,5057982..5058097,5060586..5060736)
location: region:5006585-5060736:1
so has part: feature:5006585-5006817:1:exon
so has part: feature:5015202-5015299:1:exon
so has part: feature:5019581-5019690:1:exon
so has part: feature:5020379-5020489:1:exon
so has part: feature:5021366-5021451:1:exon
so has part: feature:5021765-5021852:1:exon
so has part: feature:5023420-5023588:1:exon
so has part: feature:5023711-5023778:1:exon
so has part: feature:5024319-5024450:1:exon
so has part: feature:5030325-5030415:1:exon
so has part: feature:5030999-5031119:1:exon
so has part: feature:5032144-5032233:1:exon
so has part: feature:5034085-5034241:1:exon
so has part: feature:5036944-5037063:1:exon
so has part: feature:5037793-5037962:1:exon
so has part: feature:5038090-5038210:1:exon
so has part: feature:5040476-5040565:1:exon
so has part: feature:5040969-5041072:1:exon
so has part: feature:5049249-5049380:1:exon
so has part: feature:5050501-5050663:1:exon
so has part: feature:5052931-5053044:1:exon
so has part: feature:5056694-5056792:1:exon
so has part: feature:5057982-5058097:1:exon
so has part: feature:5060586-5060736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5006585-5006817:1:exon

position:5006817:1
position: 5006817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5015202-5015299:1:exon

position:5015202:1
position: 5015202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5015299:1
position: 5015299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5019581-5019690:1:exon

position:5019581:1
position: 5019581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5019690:1
position: 5019690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5020379-5020489:1:exon

position:5020379:1
position: 5020379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5020489:1
position: 5020489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5021366-5021451:1:exon

position:5021366:1
position: 5021366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5021451:1
position: 5021451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5021765-5021852:1:exon

position:5021765:1
position: 5021765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5021852:1
position: 5021852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5023420-5023588:1:exon

position:5023420:1
position: 5023420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5023588:1
position: 5023588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5023711-5023778:1:exon

position:5023711:1
position: 5023711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5023778:1
position: 5023778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5024319-5024450:1:exon

position:5024319:1
position: 5024319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5024450:1
position: 5024450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5030325-5030415:1:exon

position:5030325:1
position: 5030325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5030415:1
position: 5030415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5030999-5031119:1:exon

position:5030999:1
position: 5030999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5031119:1
position: 5031119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5032144-5032233:1:exon

position:5032144:1
position: 5032144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5032233:1
position: 5032233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5034085-5034241:1:exon

position:5034085:1
position: 5034085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5034241:1
position: 5034241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5036944-5037063:1:exon

position:5036944:1
position: 5036944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5037063:1
position: 5037063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5037793-5037962:1:exon

position:5037793:1
position: 5037793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5037962:1
position: 5037962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5038090-5038210:1:exon

position:5038090:1
position: 5038090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5038210:1
position: 5038210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5040476-5040565:1:exon

position:5040476:1
position: 5040476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5040565:1
position: 5040565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5040969-5041072:1:exon

position:5040969:1
position: 5040969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5041072:1
position: 5041072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5049249-5049380:1:exon

position:5049249:1
position: 5049249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5049380:1
position: 5049380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5050501-5050663:1:exon

position:5050501:1
position: 5050501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5050663:1
position: 5050663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5052931-5053044:1:exon

position:5052931:1
position: 5052931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5053044:1
position: 5053044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5056694-5056792:1:exon

position:5056694:1
position: 5056694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5056792:1
position: 5056792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5057982-5058097:1:exon

position:5057982:1
position: 5057982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5058097:1
position: 5058097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5060586-5060736:1:exon

position:5060586:1
position: 5060586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

xrn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: xrn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exoribonuclease 1
translation: MNGIIHQCSHPNDEDVHFRISEEKIIADIFHYVEVLFRIIKPKKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKALEKGEILPTEARFDSNCITPGTAFMARLHEQLKYFINSKISTDKSWEGVAVYLSGHETPGEGEHKIMEFIRAETRKPDHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLREEVRFGGRKSQKRITAVEETTFHLLHLSLMREYINYEFSSVRDKICFEYDLERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYKTYAEVLPSLGGYINEGGTLNLEHFEKYLVKLSEFDREHFSDVFVDLKWFESKVGKKYLNEAAGIAAEEAKRRKKKNKVRDDMCLAVLDDSGNETAASSNCRTEFNHEELLDDSKDEDNEDENDLFETEFRQYKRVYYMTKMGVEVVSDEFLAQQAECYVQAIQWILHYYYHGVQSWSWYYPFHYAPYLSDIRYISKLKIKFDIGKPFKPFEQLLAVLPAASKDLLPKCYQFLMTDEASPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLAAMEPCNSDLSEEEVQRNRHSNCVKFWWDKEIAFKYPSPWPEKFPDVEQCHARHEEIPMDAWKVDLRYAKRHVTEKGSLYFRGFPTLRHIKHKFYLAKSGVQIFQQPSRGENMLLELLPKEEENVDDVANQELGRSVYLNWPYLEEARVVAVSDQEMKYYLEEPAGVQKVYTEKTPPPTKVVYFGDTEQNMWHKEVHNITEFYHKRKGILINETSVLVYAQLLTGRRYVFGHNGDVTLEKEWSKQVLPFAHQTIVRNLKSFDSSFSHFSSLDELFPPRIKVFMMGTPYYGCMGEVQDSSDVVKDGRIRVVFTVPLEPQLDGIIQNQHKYSTKYNPGYVLASRLGVTGYLVSRLTGSLFIGRGSKQNPLGEQKINVGLNLKFNKKNEEVPGYTKKVGNEWLYSSAVEEILNEYLER
SIO_010081: xrn1
subclass of: SO_0000673
so part of: xrn1
location: join(5006615..5006817,5015202..5015299,5019581..5019690,5020379..5020489,5021366..5021451,5021765..5021852,5023420..5023588,5023711..5023778,5024319..5024450,5030325..5030415,5030999..5031119,5032144..5032233,5034085..5034241,5036944..5037063,5037793..5037962,5038090..5038210,5040476..5040565,5040969..5041072,5049249..5049380,5050501..5050663,5052931..5053044,5056694..5056792,5057982..5058097,5060586..5060736)
location: region:5006615-5060736:1
so has part: feature:5006615-5006817:1:exon
so has part: feature:5015202-5015299:1:exon
so has part: feature:5019581-5019690:1:exon
so has part: feature:5020379-5020489:1:exon
so has part: feature:5021366-5021451:1:exon
so has part: feature:5021765-5021852:1:exon
so has part: feature:5023420-5023588:1:exon
so has part: feature:5023711-5023778:1:exon
so has part: feature:5024319-5024450:1:exon
so has part: feature:5030325-5030415:1:exon
so has part: feature:5030999-5031119:1:exon
so has part: feature:5032144-5032233:1:exon
so has part: feature:5034085-5034241:1:exon
so has part: feature:5036944-5037063:1:exon
so has part: feature:5037793-5037962:1:exon
so has part: feature:5038090-5038210:1:exon
so has part: feature:5040476-5040565:1:exon
so has part: feature:5040969-5041072:1:exon
so has part: feature:5049249-5049380:1:exon
so has part: feature:5050501-5050663:1:exon
so has part: feature:5052931-5053044:1:exon
so has part: feature:5056694-5056792:1:exon
so has part: feature:5057982-5058097:1:exon
so has part: feature:5060586-5060736:1:exon

XP_048460442.1
type: Protein
SIO_000068: ncbiprotein

position:5006615:1
position: 5006615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5006615-5006817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5015202-5015299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5019581-5019690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5020379-5020489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5021366-5021451:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5021765-5021852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5023420-5023588:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5023711-5023778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5024319-5024450:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5030325-5030415:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5030999-5031119:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5032144-5032233:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5034085-5034241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5036944-5037063:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5037793-5037962:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5038090-5038210:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5040476-5040565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5040969-5041072:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5049249-5049380:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5050501-5050663:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5052931-5053044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5056694-5056792:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5057982-5058097:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5060586-5060736:1:exon

LOC125484752
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5063496..5093075)
location: region:5063496-5093075:-1
so has part: feature:5063496-5093075:-1:exon
subclass of: SO_0000010

125484752
type: Gene
SIO_000068: ncbigene

position:5063496:-1
position: 5063496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5093075:-1
position: 5093075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5063496-5093075:-1:exon

LOC125484752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484752
product: serine/threonine-protein kinase ATR-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048604780.1
SIO_010081: LOC125484752
subclass of: SO_0000673
so part of: LOC125484752
location: complement(join(5063496..5064399,5065882..5066053,5066871..5066971,5067308..5067501,5068992..5069254,5070494..5070689,5071240..5071395,5078279..5078502,5080031..5080222,5081722..5081909,5083056..5083957,5085073..5085240,5087441..5087532,5092889..5093075))
location: region:5063496-5093075:-1
so has part: feature:5092889-5093075:-1:exon
so has part: feature:5087441-5087532:-1:exon
so has part: feature:5085073-5085240:-1:exon
so has part: feature:5083056-5083957:-1:exon
so has part: feature:5081722-5081909:-1:exon
so has part: feature:5080031-5080222:-1:exon
so has part: feature:5078279-5078502:-1:exon
so has part: feature:5071240-5071395:-1:exon
so has part: feature:5070494-5070689:-1:exon
so has part: feature:5068992-5069254:-1:exon
so has part: feature:5067308-5067501:-1:exon
so has part: feature:5066871-5066971:-1:exon
so has part: feature:5065882-5066053:-1:exon
so has part: feature:5063496-5064399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5092889-5093075:-1:exon

position:5092889:-1
position: 5092889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5087441-5087532:-1:exon

position:5087441:-1
position: 5087441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5087532:-1
position: 5087532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5085073-5085240:-1:exon

position:5085073:-1
position: 5085073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5085240:-1
position: 5085240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5083056-5083957:-1:exon

position:5083056:-1
position: 5083056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5083957:-1
position: 5083957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5081722-5081909:-1:exon

position:5081722:-1
position: 5081722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5081909:-1
position: 5081909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5080031-5080222:-1:exon

position:5080031:-1
position: 5080031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5080222:-1
position: 5080222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5078279-5078502:-1:exon

position:5078279:-1
position: 5078279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5078502:-1
position: 5078502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5071240-5071395:-1:exon

position:5071240:-1
position: 5071240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5071395:-1
position: 5071395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5070494-5070689:-1:exon

position:5070494:-1
position: 5070494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5070689:-1
position: 5070689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5068992-5069254:-1:exon

position:5068992:-1
position: 5068992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5069254:-1
position: 5069254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5067308-5067501:-1:exon

position:5067308:-1
position: 5067308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5067501:-1
position: 5067501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5066871-5066971:-1:exon

position:5066871:-1
position: 5066871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5066971:-1
position: 5066971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5065882-5066053:-1:exon

position:5065882:-1
position: 5065882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5066053:-1
position: 5066053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5063496-5064399:-1:exon

position:5064399:-1
position: 5064399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase ATR-like isoform X1
translation: MCEQGLEMASILPALRELESARPEDYNIVVQKPRQILCQFVDKMLTDVDVVALELSKKTDSQPTCVMLLDFIQHIMKSFPLMFVNIPRKPTREIQQLSSDDECSCIGFSNWIITRLLRIAAAQNCQVLHDCVAKIILSLLWLFKSKNPFIFGTQTKELLGLFQDLICLREKNLMMYNKQSSFFQPFVVNRFVVAEREDAGYLTPAPLQLSCVLQVESLEVILLRILSSVLSSVFCRRQRLVLWEIGCSLLEHGSPKIKGIVLALLTKLINLGGPPPEELADMFFMSFIGFLKRFKEADRAELELYEEPFACLVRALFPVTAEHHASTFTIEPIYLNMLMEKLSFFMGDGLLRLINSDKLRSALCQIFQHFLMFAPSGLVCAAPIQKNRIHLICTALIEMIGTEPKQEYLLSCLYIAMRAEGMTVIQEMRNQNQEQVPETDGESSSDEVPEKKPRLSFTAECMQKAFKPAESGPVEMKFKSKLWRAMCKRLMSLISLLEKVQSHEKAVIVLEGIAVTFRLAALCTAFCGQRVSDSPDRSKINDAAASGKMQCSIGISSMKIQQIWINFEMFTQVLEYGRKQLIIGSKDEELGPLVDRLIKVIDAAIYLQAVQGQVNKDALQTLCDFLSLPWIHNHSTDAAFKSVNFSSELVSLSQHLSNSFSHQNQAKCVYLLSLLHEICPEWRTAIHRWSLQSSSDVTCAGSVRGFPILLHYLGVKSHSLIEELLLNKLQDDSNLIHEELANNIGKLVCVLSSKSELLLPTNDLPLINANCDLLCNNITVRSECATAGPTVGPPILIPFLVLIQKSMPASIKCAFISNIPYLCKHVNLAKTDSDTETIYGAMLNLMEDPDKAVRIAFSEKIHHLLDSQEGEEQSLLKELLVSKLKEAYANAKISRNNELKDTLIITTREIGRAARGDLVPLALLHLCHCLLSKFTFVAGAAYTEIRALAAAKGMKLQAFFSQYKKPICQFLVESLHTRHLAACTSNEGQSKDQCQREADHQRQITLDILSEVAQVFDFPDLNRFLTVCKYYVSSNGNFPVMNNERIFNAVQFHCMAFKQKI
SIO_010081: LOC125484752
subclass of: SO_0000673
so part of: LOC125484752
location: complement(join(5064121..5064399,5065882..5066053,5066871..5066971,5067308..5067501,5068992..5069254,5070494..5070689,5071240..5071395,5078279..5078502,5080031..5080222,5081722..5081909,5083056..5083957,5085073..5085240,5087441..5087532,5092889..5092947))
location: region:5064121-5092947:-1
so has part: feature:5092889-5092947:-1:exon
so has part: feature:5087441-5087532:-1:exon
so has part: feature:5085073-5085240:-1:exon
so has part: feature:5083056-5083957:-1:exon
so has part: feature:5081722-5081909:-1:exon
so has part: feature:5080031-5080222:-1:exon
so has part: feature:5078279-5078502:-1:exon
so has part: feature:5071240-5071395:-1:exon
so has part: feature:5070494-5070689:-1:exon
so has part: feature:5068992-5069254:-1:exon
so has part: feature:5067308-5067501:-1:exon
so has part: feature:5066871-5066971:-1:exon
so has part: feature:5065882-5066053:-1:exon
so has part: feature:5064121-5064399:-1:exon

XP_048460737.1
type: Protein
SIO_000068: ncbiprotein

position:5064121:-1
position: 5064121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5092947:-1
position: 5092947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5092889-5092947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5087441-5087532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5085073-5085240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5083056-5083957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5081722-5081909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5080031-5080222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5078279-5078502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5071240-5071395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5070494-5070689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5068992-5069254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5067308-5067501:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5066871-5066971:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5065882-5066053:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5064121-5064399:-1:exon

LOC125484752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484752
product: serine/threonine-protein kinase ATR-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048604781.1
SIO_010081: LOC125484752
subclass of: SO_0000673
so part of: LOC125484752
location: complement(join(5064247..5064399,5065882..5066053,5067308..5067501,5068992..5069254,5070494..5070689,5071240..5071395,5078279..5078502,5080031..5080222,5081722..5081909,5083056..5083957,5085073..5085240,5087441..5087532,5092889..5093075))
location: region:5064247-5093075:-1
so has part: feature:5092889-5093075:-1:exon
so has part: feature:5087441-5087532:-1:exon
so has part: feature:5085073-5085240:-1:exon
so has part: feature:5083056-5083957:-1:exon
so has part: feature:5081722-5081909:-1:exon
so has part: feature:5080031-5080222:-1:exon
so has part: feature:5078279-5078502:-1:exon
so has part: feature:5071240-5071395:-1:exon
so has part: feature:5070494-5070689:-1:exon
so has part: feature:5068992-5069254:-1:exon
so has part: feature:5067308-5067501:-1:exon
so has part: feature:5065882-5066053:-1:exon
so has part: feature:5064247-5064399:-1:exon

position:5064247:-1
position: 5064247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5092889-5093075:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5087441-5087532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5085073-5085240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5083056-5083957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5081722-5081909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5080031-5080222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5078279-5078502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5071240-5071395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5070494-5070689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5068992-5069254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5067308-5067501:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5065882-5066053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5064247-5064399:-1:exon

LOC125484752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase ATR-like isoform X2
translation: MCEQGLEMASILPALRELESARPEDYNIVVQKPRQILCQFVDKMLTDVDVVALELSKKTDSQPTCVMLLDFIQHIMKSFPLMFVNIPRKPTREIQQLSSDDECSCIGFSNWIITRLLRIAAAQNCQVLHDCVAKIILSLLWLFKSKNPFIFGTQTKELLGLFQDLICLREKNLMMYNKQSSFFQPFVVNRFVVAEREDAGYLTPAPLQLSCVLQVESLEVILLRILSSVLSSVFCRRQRLVLWEIGCSLLEHGSPKIKGIVLALLTKLINLGGPPPEELADMFFMSFIGFLKRFKEADRAELELYEEPFACLVRALFPVTAEHHASTFTIEPIYLNMLMEKLSFFMGDGLLRLINSDKLRSALCQIFQHFLMFAPSGLVCAAPIQKNRIHLICTALIEMIGTEPKQEYLLSCLYIAMRAEGMTVIQEMRNQNQEQVPETDGESSSDEVPEKKPRLSFTAECMQKAFKPAESGPVEMKFKSKLWRAMCKRLMSLISLLEKVQSHEKAVIVLEGIAVTFRLAALCTAFCGQRVSDSPDRSKINDAAASGKMQCSIGISSMKIQQIWINFEMFTQVLEYGRKQLIIGSKDEELGPLVDRLIKVIDAAIYLQAVQGQVNKDALQTLCDFLSLPWIHNHSTDAAFKSVNFSSELVSLSQHLSNSFSHQNQAKCVYLLSLLHEICPEWRTAIHRWSLQSSSDVTCAGSVRGFPILLHYLGVKSHSLIEELLLNKLQDDSNLIHEELANNIGKLVCVLSSKSELLLPTNDLPLINANCDLLCNNITVRSECATAGPTVGPPILIPFLVLIQKSMPASIKCAFISNIPYLCKHVNLAKTDSDTETIYGAMLNLMEDPDKAVRIAFSEKIHHLLDSQEGEEQSLLKESCQRRPGSIGPFAPLPLFAVQVHICCRCCLYRDQSTSCSQRYEAASFLQPVQEAHMPVFGGVITYKAPGSLY
SIO_010081: LOC125484752
subclass of: SO_0000673
so part of: LOC125484752
location: complement(join(5064353..5064399,5065882..5066053,5067308..5067501,5068992..5069254,5070494..5070689,5071240..5071395,5078279..5078502,5080031..5080222,5081722..5081909,5083056..5083957,5085073..5085240,5087441..5087532,5092889..5092947))
location: region:5064353-5092947:-1
so has part: feature:5092889-5092947:-1:exon
so has part: feature:5087441-5087532:-1:exon
so has part: feature:5085073-5085240:-1:exon
so has part: feature:5083056-5083957:-1:exon
so has part: feature:5081722-5081909:-1:exon
so has part: feature:5080031-5080222:-1:exon
so has part: feature:5078279-5078502:-1:exon
so has part: feature:5071240-5071395:-1:exon
so has part: feature:5070494-5070689:-1:exon
so has part: feature:5068992-5069254:-1:exon
so has part: feature:5067308-5067501:-1:exon
so has part: feature:5065882-5066053:-1:exon
so has part: feature:5064353-5064399:-1:exon

XP_048460738.1
type: Protein
SIO_000068: ncbiprotein

position:5064353:-1
position: 5064353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5092889-5092947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5087441-5087532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5085073-5085240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5083056-5083957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5081722-5081909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5080031-5080222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5078279-5078502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5071240-5071395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5070494-5070689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5068992-5069254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5067308-5067501:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5065882-5066053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5064353-5064399:-1:exon

paqr9
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: paqr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5108796..5109779)
location: region:5108796-5109779:-1
so has part: feature:5108796-5109779:-1:exon
subclass of: SO_0000010

109934426
type: Gene
SIO_000068: ncbigene

position:5108796:-1
position: 5108796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5109779:-1
position: 5109779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5108796-5109779:-1:exon

paqr9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: paqr9
product: progestin and adipoQ receptor family member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_020533203.1
SIO_010081: paqr9
subclass of: SO_0000673
so part of: paqr9
location: complement(5108796..5109779)
location: region:5108796-5109779:-1
so has part: feature:5108796-5109779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5108796-5109779:-1:exon

paqr9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: paqr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progesterone receptor epsilon
translation: MYRRQRIDFLACEEIPREMRECFIVTRYRRPNSTVAECLRSVLQPTNETFNFWSHCIPLIFFLYRFDQLLFKNEEVRYDHSFLLPMWCFGFGVITIFAESCAAHLFNTLSQQLRHIFYYLDYVAFNVYGFGSTIACYYYIFPLLTVMNPILLEKSGQCTEYTDVVKFYSAFCIPGTLSLLVICTIIICKSYIDWAQYRYTVRAIVFLIPLSVSVPIFIDIFYFDFPLKNPHIFFHFWRQRTWLLFAIMFNVSRIPERFWPGQFDVIGQSHQWFHLFSFLTVYDQLCYLEYGFNTFVKSPVIIPNFADTVGAMLLLLLSFLLVIKGIA
SIO_010081: paqr9
subclass of: SO_0000673
so part of: paqr9
location: complement(5108796..5109779)
location: region:5108796-5109779:-1
so has part: feature:5108796-5109779:-1:exon

XP_020388792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5108796-5109779:-1:exon

LOC109934428
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109934428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5224549..5253119)
location: region:5224549-5253119:-1
so has part: feature:5224549-5253119:-1:exon
subclass of: SO_0000010

109934428
type: Gene
SIO_000068: ncbigene

position:5224549:-1
position: 5224549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5253119:-1
position: 5253119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5224549-5253119:-1:exon

LOC109934428
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109934428
product: plastin-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604487.1
SIO_010081: LOC109934428
subclass of: SO_0000673
so part of: LOC109934428
location: complement(join(5224549..5224592,5230210..5230402,5230511..5230603,5237790..5237932,5238470..5238635,5239779..5239860,5241750..5241882,5252981..5253119))
location: region:5224549-5253119:-1
so has part: feature:5252981-5253119:-1:exon
so has part: feature:5241750-5241882:-1:exon
so has part: feature:5239779-5239860:-1:exon
so has part: feature:5238470-5238635:-1:exon
so has part: feature:5237790-5237932:-1:exon
so has part: feature:5230511-5230603:-1:exon
so has part: feature:5230210-5230402:-1:exon
so has part: feature:5224549-5224592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5252981-5253119:-1:exon

position:5252981:-1
position: 5252981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5241750-5241882:-1:exon

position:5241750:-1
position: 5241750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5241882:-1
position: 5241882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5239779-5239860:-1:exon

position:5239779:-1
position: 5239779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5239860:-1
position: 5239860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5238470-5238635:-1:exon

position:5238470:-1
position: 5238470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5238635:-1
position: 5238635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5237790-5237932:-1:exon

position:5237790:-1
position: 5237790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5237932:-1
position: 5237932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5230511-5230603:-1:exon

position:5230511:-1
position: 5230511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5230603:-1
position: 5230603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5230210-5230402:-1:exon

position:5230210:-1
position: 5230210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5230402:-1
position: 5230402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5224549-5224592:-1:exon

position:5224592:-1
position: 5224592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109934428
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109934428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plastin-1
translation: MFQVFQELKDKEISKTFRKVINKKEGICAIGGMSDRSSEGTQHSYEEEEKVAFVNWINKALDGDPDCKHLIPMDANSDRLFSAVGDGILLCKMINLSQPDTIDDRVINKRKLTPFTISENLNLALNSASAIGCTVVNIGAEDLKEGRHHLVLGLLWQIIKIGLFADIQITRNEALIALLDEGEELEELLKLSPEDLLLRWVNYHLENAGYHKINNFSQDIKDSRAYFHLLSQIAPSGEDDEMMVEIEMTGLHEKDDLKRAECMLREADKLGCRQFVTPVDVVSGNPKLNLAFVANLFNKYPALHKPNKDYDLTLLEGGMKSNAFIVIDDS
SIO_010081: LOC109934428
subclass of: SO_0000673
so part of: LOC109934428
location: complement(join(5224549..5224592,5230210..5230402,5230511..5230603,5237790..5237932,5238470..5238635,5239779..5239860,5241750..5241882,5252981..5253119))
location: region:5224549-5253119:-1
so has part: feature:5252981-5253119:-1:exon
so has part: feature:5241750-5241882:-1:exon
so has part: feature:5239779-5239860:-1:exon
so has part: feature:5238470-5238635:-1:exon
so has part: feature:5237790-5237932:-1:exon
so has part: feature:5230511-5230603:-1:exon
so has part: feature:5230210-5230402:-1:exon
so has part: feature:5224549-5224592:-1:exon

XP_048460444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5252981-5253119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5241750-5241882:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5239779-5239860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5238470-5238635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5237790-5237932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5230511-5230603:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5230210-5230402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5224549-5224592:-1:exon

LOC125484699
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5271569..5292119
location: region:5271569-5292119:1
so has part: feature:5271569-5292119:1:exon
subclass of: SO_0000010

125484699
type: Gene
SIO_000068: ncbigene

position:5271569:1
position: 5271569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5292119:1
position: 5292119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5271569-5292119:1:exon

LOC125484699
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484699
product: plastin-1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604488.1
SIO_010081: LOC125484699
subclass of: SO_0000673
so part of: LOC125484699
location: join(5271569..5271622,5276664..5276797,5283101..5283224,5288340..5288464,5289565..5292119)
location: region:5271569-5292119:1
so has part: feature:5271569-5271622:1:exon
so has part: feature:5276664-5276797:1:exon
so has part: feature:5283101-5283224:1:exon
so has part: feature:5288340-5288464:1:exon
so has part: feature:5289565-5292119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5271569-5271622:1:exon

position:5271622:1
position: 5271622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5276664-5276797:1:exon

position:5276664:1
position: 5276664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5276797:1
position: 5276797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5283101-5283224:1:exon

position:5283101:1
position: 5283101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5283224:1
position: 5283224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5288340-5288464:1:exon

position:5288340:1
position: 5288340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5288464:1
position: 5288464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5289565-5292119:1:exon

position:5289565:1
position: 5289565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484699
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plastin-1
translation: MAPLTRDHDGADTGAAEDLENCNYVIELGKNKAAFSLVGIGGQDLNDGNRTLTLALIWQLMRRYTLKVLSDLGDGSKVTDEIIIKWVNETLAKAKKRSSITSFKDKCICTSLPVIDLIDAIAPNTIRYELVKQTDFSDIDKLNNAKYAISVARKIGTRVYALPEDLVEVKPKMVMTVFACLMGKGLKKV
SIO_010081: LOC125484699
subclass of: SO_0000673
so part of: LOC125484699
location: join(5271569..5271622,5276664..5276797,5283101..5283224,5288340..5288464,5289565..5289697)
location: region:5271569-5289697:1
so has part: feature:5271569-5271622:1:exon
so has part: feature:5276664-5276797:1:exon
so has part: feature:5283101-5283224:1:exon
so has part: feature:5288340-5288464:1:exon
so has part: feature:5289565-5289697:1:exon

XP_048460445.1
type: Protein
SIO_000068: ncbiprotein

position:5289697:1
position: 5289697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5271569-5271622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5276664-5276797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5283101-5283224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5288340-5288464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5289565-5289697:1:exon

trpc1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trpc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5328979..5390694
location: region:5328979-5390694:1
so has part: feature:5328979-5390694:1:exon
subclass of: SO_0000010

109922025
type: Gene
SIO_000068: ncbigene

position:5328979:1
position: 5328979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5390694:1
position: 5390694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5328979-5390694:1:exon

trpc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: trpc1
product: transient receptor potential cation channel, subfamily C, member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604489.1
SIO_010081: trpc1
subclass of: SO_0000673
so part of: trpc1
location: join(5328979..5329073,5332307..5332458,5332553..5332654,5334365..5334466,5338194..5338396,5343826..5343957,5346635..5346830,5356587..5356853,5365894..5366037,5378510..5378685,5379512..5379571,5379707..5379908,5386431..5386625,5389613..5390694)
location: region:5328979-5390694:1
so has part: feature:5328979-5329073:1:exon
so has part: feature:5332307-5332458:1:exon
so has part: feature:5332553-5332654:1:exon
so has part: feature:5334365-5334466:1:exon
so has part: feature:5338194-5338396:1:exon
so has part: feature:5343826-5343957:1:exon
so has part: feature:5346635-5346830:1:exon
so has part: feature:5356587-5356853:1:exon
so has part: feature:5365894-5366037:1:exon
so has part: feature:5378510-5378685:1:exon
so has part: feature:5379512-5379571:1:exon
so has part: feature:5379707-5379908:1:exon
so has part: feature:5386431-5386625:1:exon
so has part: feature:5389613-5390694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5328979-5329073:1:exon

position:5329073:1
position: 5329073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5332307-5332458:1:exon

position:5332307:1
position: 5332307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5332458:1
position: 5332458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5332553-5332654:1:exon

position:5332553:1
position: 5332553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5332654:1
position: 5332654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5334365-5334466:1:exon

position:5334365:1
position: 5334365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5334466:1
position: 5334466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5338194-5338396:1:exon

position:5338194:1
position: 5338194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5338396:1
position: 5338396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5343826-5343957:1:exon

position:5343826:1
position: 5343826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5343957:1
position: 5343957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5346635-5346830:1:exon

position:5346635:1
position: 5346635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5346830:1
position: 5346830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5356587-5356853:1:exon

position:5356587:1
position: 5356587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5356853:1
position: 5356853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5365894-5366037:1:exon

position:5365894:1
position: 5365894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5366037:1
position: 5366037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5378510-5378685:1:exon

position:5378510:1
position: 5378510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5378685:1
position: 5378685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5379512-5379571:1:exon

position:5379512:1
position: 5379512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5379571:1
position: 5379571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5379707-5379908:1:exon

position:5379707:1
position: 5379707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5379908:1
position: 5379908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5386431-5386625:1:exon

position:5386431:1
position: 5386431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5386625:1
position: 5386625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5389613-5390694:1:exon

position:5389613:1
position: 5389613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trpc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: trpc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 1
translation: MVKKLLDEKFSELNINCVDVLGRNAVTIAIENENLDILQFLLDRGCQTTDALLVAISSEVVGAVDILLNHRPRRSSKPTIAFQMFTEESMSILCNTSKYRPLIDPFLWIEQQHYTKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDLSLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLSSPSLIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEPIDKRGLLEERMNLSRLKLAIKYNQKESVLTLRNVVIILCMQFVNPDVVGSGLNVSFLLWNVLMYNLSLGMVWSDVKRLWYDGLEDFMEESRNQLSFVMNSLYLATFALKVVAHNKFHAIGDRKDWDAFHPTLVAEGLFAFGNILSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLISFTIGLTQLYDKEFSTMEGKDCSGIFCEQQSNSTFHSAQGKTSSANSGRPATANLLMFVGTCYALFWYVFSLAHVALFVTRFTHTDDLRSFVGTFIIGTYNVVVVIVLTKLLVAMLHKSFQMIANHEDKEWKFARAKLWLSYFDDKCTLPSPFNIIPSPKTICYLFTSLNKWICSHTSAGKVKRQNSLKEWKTLKHKRDQNYQKVMCCLVHRYLTAMRQKMHSTDQATEENLNELRQDLSKFRNEMRDLLGFRTAKYAMFYSRN
SIO_010081: trpc1
subclass of: SO_0000673
so part of: trpc1
location: join(5332318..5332458,5332553..5332654,5334365..5334466,5338194..5338396,5343826..5343957,5346635..5346830,5356587..5356853,5365894..5366037,5378510..5378685,5379512..5379571,5379707..5379908,5386431..5386625,5389613..5389840)
location: region:5332318-5389840:1
so has part: feature:5332318-5332458:1:exon
so has part: feature:5332553-5332654:1:exon
so has part: feature:5334365-5334466:1:exon
so has part: feature:5338194-5338396:1:exon
so has part: feature:5343826-5343957:1:exon
so has part: feature:5346635-5346830:1:exon
so has part: feature:5356587-5356853:1:exon
so has part: feature:5365894-5366037:1:exon
so has part: feature:5378510-5378685:1:exon
so has part: feature:5379512-5379571:1:exon
so has part: feature:5379707-5379908:1:exon
so has part: feature:5386431-5386625:1:exon
so has part: feature:5389613-5389840:1:exon

XP_048460446.1
type: Protein
SIO_000068: ncbiprotein

position:5332318:1
position: 5332318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5389840:1
position: 5389840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5332318-5332458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332553-5332654:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5334365-5334466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5338194-5338396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5343826-5343957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5346635-5346830:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5356587-5356853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5365894-5366037:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5378510-5378685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5379512-5379571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5379707-5379908:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5386431-5386625:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5389613-5389840:1:exon

pcolce2b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pcolce2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5393869..5443965)
location: region:5393869-5443965:-1
so has part: feature:5393869-5443965:-1:exon
subclass of: SO_0000010

109922024
type: Gene
SIO_000068: ncbigene

position:5393869:-1
position: 5393869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5443965:-1
position: 5443965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5393869-5443965:-1:exon

pcolce2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pcolce2b
product: procollagen C-endopeptidase enhancer 2b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 23 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604490.1
SIO_010081: pcolce2b
subclass of: SO_0000673
so part of: pcolce2b
location: complement(join(5393869..5393999,5397061..5397228,5399210..5399298,5415667..5415812,5424199..5424323,5425138..5425393,5441174..5441279,5442977..5443965))
location: region:5393869-5443965:-1
so has part: feature:5442977-5443965:-1:exon
so has part: feature:5441174-5441279:-1:exon
so has part: feature:5425138-5425393:-1:exon
so has part: feature:5424199-5424323:-1:exon
so has part: feature:5415667-5415812:-1:exon
so has part: feature:5399210-5399298:-1:exon
so has part: feature:5397061-5397228:-1:exon
so has part: feature:5393869-5393999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5442977-5443965:-1:exon

position:5442977:-1
position: 5442977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5441174-5441279:-1:exon

position:5441174:-1
position: 5441174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5441279:-1
position: 5441279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5425138-5425393:-1:exon

position:5425138:-1
position: 5425138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5425393:-1
position: 5425393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5424199-5424323:-1:exon

position:5424199:-1
position: 5424199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5424323:-1
position: 5424323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5415667-5415812:-1:exon

position:5415667:-1
position: 5415667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5415812:-1
position: 5415812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5399210-5399298:-1:exon

position:5399210:-1
position: 5399210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5399298:-1
position: 5399298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5397061-5397228:-1:exon

position:5397061:-1
position: 5397061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5397228:-1
position: 5397228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5393869-5393999:-1:exon

position:5393999:-1
position: 5393999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pcolce2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pcolce2b
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(5415672..5415674),aa:OTHER)
product: LOW QUALITY PROTEIN: procollagen C-endopeptidase enhancer 2b
translation: MKPVGFPYLGLLCATLVSCQLPPGKRNFKCGGIRSGESGFIGSEGFPRLYPPNSKCTWKITVPKGRVVALNFRFLDLERDTLCRYDYIDVYDGHINGQRLGRFCGTSKPGAIISTGNKMMVQMVTDANTAGNGFVAMYSATRPNQRNDQFCGGRLEKSPGSFKTPNWPDNDYPAGVSCSWHIVAPKHQIIELKFEKFDVERDNYCRYDYVSVFNGGENDEAKRIGKYCGDSPPAXVIKAVKPTIPPCQLKCKKTGTLHSNYCASDFVLTGTVITAITRNGSIHTTISVINIFKEGRMAIQQAGKNMSVKIISVCKKCPIIKRGLNYIFMGQVDEAGRGHVLPNSFVMPYRSKNQRFLNNVKNRRC
SIO_010081: pcolce2b
subclass of: SO_0000673
so part of: pcolce2b
location: complement(join(5393869..5393999,5397061..5397228,5399210..5399298,5415667..5415812,5424199..5424323,5425138..5425393,5441174..5441279,5442977..5443053))
location: region:5393869-5443053:-1
so has part: feature:5442977-5443053:-1:exon
so has part: feature:5441174-5441279:-1:exon
so has part: feature:5425138-5425393:-1:exon
so has part: feature:5424199-5424323:-1:exon
so has part: feature:5415667-5415812:-1:exon
so has part: feature:5399210-5399298:-1:exon
so has part: feature:5397061-5397228:-1:exon
so has part: feature:5393869-5393999:-1:exon

XP_048460447.1
type: Protein
SIO_000068: ncbiprotein

position:5443053:-1
position: 5443053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5442977-5443053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5441174-5441279:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5425138-5425393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5424199-5424323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5415667-5415812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5399210-5399298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5397061-5397228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5393869-5393999:-1:exon

LOC125484661
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5457712..5475786)
location: region:5457712-5475786:-1
so has part: feature:5457712-5475786:-1:exon
subclass of: SO_0000011

125484661
type: Gene
SIO_000068: ncbigene

position:5457712:-1
position: 5457712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5475786:-1
position: 5475786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5457712-5475786:-1:exon

LOC125484661
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484661
product: uncharacterized LOC125484661, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263472.1
SIO_010081: LOC125484661
subclass of: SO_0000673
so part of: LOC125484661
location: complement(join(5457712..5458380,5475562..5475786))
location: region:5457712-5475786:-1
so has part: feature:5475562-5475786:-1:exon
so has part: feature:5457712-5458380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5475562-5475786:-1:exon

position:5475562:-1
position: 5475562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5457712-5458380:-1:exon

position:5458380:-1
position: 5458380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484661
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484661
product: uncharacterized LOC125484661, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263473.1
SIO_010081: LOC125484661
subclass of: SO_0000673
so part of: LOC125484661
location: complement(join(5457712..5458380,5469504..5469668,5475562..5475783))
location: region:5457712-5475783:-1
so has part: feature:5475562-5475783:-1:exon
so has part: feature:5469504-5469668:-1:exon
so has part: feature:5457712-5458380:-1:exon

position:5475783:-1
position: 5475783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5475562-5475783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5469504-5469668:-1:exon

position:5469504:-1
position: 5469504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5469668:-1
position: 5469668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5457712-5458380:-1:exon

LOC109918116
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109918116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5465003..5465527
location: region:5465003-5465527:1
so has part: feature:5465003-5465527:1:exon

109918116
type: Gene
SIO_000068: ncbigene

position:5465003:1
position: 5465003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5465527:1
position: 5465527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5465003-5465527:1:exon

LOC109918116
type: Exon
subclass of: SO_0000147
RO_0002162: 259920
gene: LOC109918116
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins
pseudo: true
SIO_010081: LOC109918116
subclass of: SO_0000673
so part of: LOC109918116
location: 5465003..5465527
location: region:5465003-5465527:1
so has part: feature:5465003-5465527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5465003-5465527:1:exon

LOC109918115
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109918115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5475805..5550903
location: region:5475805-5550903:1
so has part: feature:5475805-5550903:1:exon
subclass of: SO_0000010

109918115
type: Gene
SIO_000068: ncbigene

position:5475805:1
position: 5475805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5550903:1
position: 5550903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5475805-5550903:1:exon

LOC109918115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918115
product: U2 snRNP-associated SURP domain containing, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020518006.2
SIO_010081: LOC109918115
subclass of: SO_0000673
so part of: LOC109918115
location: join(5475805..5475919,5477078..5477143,5486520..5486616,5490014..5490128,5493737..5493858,5495339..5495406,5495510..5495625,5497355..5497387,5497473..5497555,5498552..5498717,5501323..5501531,5503753..5503796,5513522..5513626,5513744..5513810,5513900..5514057,5516265..5516427,5518235..5518314,5522832..5522919,5526232..5526366,5526501..5526557,5529320..5529479,5532192..5532287,5532628..5532694,5534332..5534506,5534599..5534709,5537375..5537502,5540702..5540866,5550373..5550903)
location: region:5475805-5550903:1
so has part: feature:5475805-5475919:1:exon
so has part: feature:5477078-5477143:1:exon
so has part: feature:5486520-5486616:1:exon
so has part: feature:5490014-5490128:1:exon
so has part: feature:5493737-5493858:1:exon
so has part: feature:5495339-5495406:1:exon
so has part: feature:5495510-5495625:1:exon
so has part: feature:5497355-5497387:1:exon
so has part: feature:5497473-5497555:1:exon
so has part: feature:5498552-5498717:1:exon
so has part: feature:5501323-5501531:1:exon
so has part: feature:5503753-5503796:1:exon
so has part: feature:5513522-5513626:1:exon
so has part: feature:5513744-5513810:1:exon
so has part: feature:5513900-5514057:1:exon
so has part: feature:5516265-5516427:1:exon
so has part: feature:5518235-5518314:1:exon
so has part: feature:5522832-5522919:1:exon
so has part: feature:5526232-5526366:1:exon
so has part: feature:5526501-5526557:1:exon
so has part: feature:5529320-5529479:1:exon
so has part: feature:5532192-5532287:1:exon
so has part: feature:5532628-5532694:1:exon
so has part: feature:5534332-5534506:1:exon
so has part: feature:5534599-5534709:1:exon
so has part: feature:5537375-5537502:1:exon
so has part: feature:5540702-5540866:1:exon
so has part: feature:5550373-5550903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5475805-5475919:1:exon

position:5475919:1
position: 5475919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5477078-5477143:1:exon

position:5477078:1
position: 5477078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5477143:1
position: 5477143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5486520-5486616:1:exon

position:5486520:1
position: 5486520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5486616:1
position: 5486616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5490014-5490128:1:exon

position:5490014:1
position: 5490014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5490128:1
position: 5490128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5493737-5493858:1:exon

position:5493737:1
position: 5493737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5493858:1
position: 5493858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5495339-5495406:1:exon

position:5495339:1
position: 5495339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5495406:1
position: 5495406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5495510-5495625:1:exon

position:5495510:1
position: 5495510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5495625:1
position: 5495625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5497355-5497387:1:exon

position:5497355:1
position: 5497355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5497387:1
position: 5497387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5497473-5497555:1:exon

position:5497473:1
position: 5497473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5497555:1
position: 5497555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5498552-5498717:1:exon

position:5498552:1
position: 5498552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5498717:1
position: 5498717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5501323-5501531:1:exon

position:5501323:1
position: 5501323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5501531:1
position: 5501531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5503753-5503796:1:exon

position:5503753:1
position: 5503753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5503796:1
position: 5503796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5513522-5513626:1:exon

position:5513522:1
position: 5513522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5513626:1
position: 5513626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5513744-5513810:1:exon

position:5513744:1
position: 5513744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5513810:1
position: 5513810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5513900-5514057:1:exon

position:5513900:1
position: 5513900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5514057:1
position: 5514057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5516265-5516427:1:exon

position:5516265:1
position: 5516265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5516427:1
position: 5516427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5518235-5518314:1:exon

position:5518235:1
position: 5518235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5518314:1
position: 5518314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5522832-5522919:1:exon

position:5522832:1
position: 5522832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5522919:1
position: 5522919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5526232-5526366:1:exon

position:5526232:1
position: 5526232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5526366:1
position: 5526366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5526501-5526557:1:exon

position:5526501:1
position: 5526501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5526557:1
position: 5526557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5529320-5529479:1:exon

position:5529320:1
position: 5529320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5529479:1
position: 5529479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5532192-5532287:1:exon

position:5532192:1
position: 5532192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5532287:1
position: 5532287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5532628-5532694:1:exon

position:5532628:1
position: 5532628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5532694:1
position: 5532694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5534332-5534506:1:exon

position:5534332:1
position: 5534332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5534506:1
position: 5534506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5534599-5534709:1:exon

position:5534599:1
position: 5534599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5534709:1
position: 5534709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5537375-5537502:1:exon

position:5537375:1
position: 5537375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5537502:1
position: 5537502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5540702-5540866:1:exon

position:5540702:1
position: 5540702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5540866:1
position: 5540866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5550373-5550903:1:exon

position:5550373:1
position: 5550373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109918115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918115
product: U2 snRNP-associated SURP domain containing, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020518007.2
SIO_010081: LOC109918115
subclass of: SO_0000673
so part of: LOC109918115
location: join(5475852..5475919,5486520..5486616,5490014..5490128,5493737..5493858,5495339..5495406,5495510..5495625,5497355..5497387,5497473..5497555,5498552..5498717,5501323..5501531,5503753..5503796,5513522..5513626,5513744..5513810,5513900..5514057,5516265..5516427,5518235..5518314,5522832..5522919,5526232..5526366,5526501..5526557,5529320..5529479,5532192..5532287,5532628..5532694,5534332..5534506,5534599..5534709,5537375..5537502,5540702..5540866,5550373..5550903)
location: region:5475852-5550903:1
so has part: feature:5475852-5475919:1:exon
so has part: feature:5486520-5486616:1:exon
so has part: feature:5490014-5490128:1:exon
so has part: feature:5493737-5493858:1:exon
so has part: feature:5495339-5495406:1:exon
so has part: feature:5495510-5495625:1:exon
so has part: feature:5497355-5497387:1:exon
so has part: feature:5497473-5497555:1:exon
so has part: feature:5498552-5498717:1:exon
so has part: feature:5501323-5501531:1:exon
so has part: feature:5503753-5503796:1:exon
so has part: feature:5513522-5513626:1:exon
so has part: feature:5513744-5513810:1:exon
so has part: feature:5513900-5514057:1:exon
so has part: feature:5516265-5516427:1:exon
so has part: feature:5518235-5518314:1:exon
so has part: feature:5522832-5522919:1:exon
so has part: feature:5526232-5526366:1:exon
so has part: feature:5526501-5526557:1:exon
so has part: feature:5529320-5529479:1:exon
so has part: feature:5532192-5532287:1:exon
so has part: feature:5532628-5532694:1:exon
so has part: feature:5534332-5534506:1:exon
so has part: feature:5534599-5534709:1:exon
so has part: feature:5537375-5537502:1:exon
so has part: feature:5540702-5540866:1:exon
so has part: feature:5550373-5550903:1:exon

position:5475852:1
position: 5475852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5475852-5475919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5486520-5486616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5490014-5490128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5493737-5493858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5495339-5495406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5495510-5495625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5497355-5497387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5497473-5497555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5498552-5498717:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5501323-5501531:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5503753-5503796:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5513522-5513626:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5513744-5513810:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5513900-5514057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5516265-5516427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5518235-5518314:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5522832-5522919:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5526232-5526366:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5526501-5526557:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5529320-5529479:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5532192-5532287:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5532628-5532694:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5534332-5534506:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5534599-5534709:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5537375-5537502:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5540702-5540866:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5550373-5550903:1:exon

LOC109918115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X1
translation: MTASKRTLSKKEQEEIKKKEDEKAAAEIYEEFLASFEGADSSKVKAFVRGGIVNATREERLEEQKGKLYKPSTRVPEIKSLIPEKSSSPSFTSDPKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERQKTKVGKDAPFRPSRFEPLPSEESSQNRRSSESSRRNRQTNALEEFTPGSHDAGDPTTTNLYIGNINPKMNEEMLCQEFGRFGPLASVKIMWPRTEEERARERNCGFVAYMNRRDAERALKNLNGKIIMEFEMKLGWGKAVPIPPHPIYIPPAMRELTLPPPPSGLPFNAQPRERLKNPTTPVMPPKNQDDFEKTLSHAIVKVVIPTERNLLCVIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQSPAHVYYRWKLYSILQGDSPTKWRTLDFRMFKNGSFWRPPPLNPYLQEILEETESRVEENVKKGQLKEDQRDKLEELLRGLTPRKNDIGDAMVFCLNHAEAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFESKLCQIFANLNATYKSIQGHLQSENFKQRVMGCFRAWEDWTIYPDPFLIKLQNIFLGLVDLEEENKEVCKPQNIYLGLVDVEEMKDVSKRQPESEELDGAPVEDELDGAPLEDVDGVPIDLGSGLDDLDGVPMKVLDDDLDGVPIDGPEDPKKFQSVFKVAPSKWEAVDEAELESQAVTTSKWELFDQPTESEEDEQPVDSTLKESDDDDDIDDQVPRPEELLYFTNPVKEESVESKPVLKYSEMSEEKRAKLREIELKVMKFQDELESGKRLKKAGQTIQEQVEHYRDKLLQREKEKELERERDKKDKEKDVIKSEYRIKDGKEKESSSSPSSKERKRKHSTSVSPTRIARRAKSPSPRSEWSDRSRTKDSPHTRSTHKNTPRDTNKKSKRSRSGSRTPKRSKRSRSRTPRKSSKKSRSQSRSPHRSHKKSKKSKH
SIO_010081: LOC109918115
subclass of: SO_0000673
so part of: LOC109918115
location: join(5486560..5486616,5490014..5490128,5493737..5493858,5495339..5495406,5495510..5495625,5497355..5497387,5497473..5497555,5498552..5498717,5501323..5501531,5503753..5503796,5513522..5513626,5513744..5513810,5513900..5514057,5516265..5516427,5518235..5518314,5522832..5522919,5526232..5526366,5526501..5526557,5529320..5529479,5532192..5532287,5532628..5532694,5534332..5534506,5534599..5534709,5537375..5537502,5540702..5540866,5550373..5550511)
location: region:5486560-5550511:1
so has part: feature:5486560-5486616:1:exon
so has part: feature:5490014-5490128:1:exon
so has part: feature:5493737-5493858:1:exon
so has part: feature:5495339-5495406:1:exon
so has part: feature:5495510-5495625:1:exon
so has part: feature:5497355-5497387:1:exon
so has part: feature:5497473-5497555:1:exon
so has part: feature:5498552-5498717:1:exon
so has part: feature:5501323-5501531:1:exon
so has part: feature:5503753-5503796:1:exon
so has part: feature:5513522-5513626:1:exon
so has part: feature:5513744-5513810:1:exon
so has part: feature:5513900-5514057:1:exon
so has part: feature:5516265-5516427:1:exon
so has part: feature:5518235-5518314:1:exon
so has part: feature:5522832-5522919:1:exon
so has part: feature:5526232-5526366:1:exon
so has part: feature:5526501-5526557:1:exon
so has part: feature:5529320-5529479:1:exon
so has part: feature:5532192-5532287:1:exon
so has part: feature:5532628-5532694:1:exon
so has part: feature:5534332-5534506:1:exon
so has part: feature:5534599-5534709:1:exon
so has part: feature:5537375-5537502:1:exon
so has part: feature:5540702-5540866:1:exon
so has part: feature:5550373-5550511:1:exon

XP_020373595.1
type: Protein
SIO_000068: ncbiprotein

position:5486560:1
position: 5486560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5550511:1
position: 5550511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5486560-5486616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5490014-5490128:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5493737-5493858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5495339-5495406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5495510-5495625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5497355-5497387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5497473-5497555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5498552-5498717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5501323-5501531:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5503753-5503796:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5513522-5513626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5513744-5513810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5513900-5514057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5516265-5516427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5518235-5518314:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5522832-5522919:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5526232-5526366:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5526501-5526557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5529320-5529479:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5532192-5532287:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5532628-5532694:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5534332-5534506:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5534599-5534709:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5537375-5537502:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5540702-5540866:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5550373-5550511:1:exon

LOC109918115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X1
translation: MTASKRTLSKKEQEEIKKKEDEKAAAEIYEEFLASFEGADSSKVKAFVRGGIVNATREERLEEQKGKLYKPSTRVPEIKSLIPEKSSSPSFTSDPKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERQKTKVGKDAPFRPSRFEPLPSEESSQNRRSSESSRRNRQTNALEEFTPGSHDAGDPTTTNLYIGNINPKMNEEMLCQEFGRFGPLASVKIMWPRTEEERARERNCGFVAYMNRRDAERALKNLNGKIIMEFEMKLGWGKAVPIPPHPIYIPPAMRELTLPPPPSGLPFNAQPRERLKNPTTPVMPPKNQDDFEKTLSHAIVKVVIPTERNLLCVIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQSPAHVYYRWKLYSILQGDSPTKWRTLDFRMFKNGSFWRPPPLNPYLQEILEETESRVEENVKKGQLKEDQRDKLEELLRGLTPRKNDIGDAMVFCLNHAEAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFESKLCQIFANLNATYKSIQGHLQSENFKQRVMGCFRAWEDWTIYPDPFLIKLQNIFLGLVDLEEENKEVCKPQNIYLGLVDVEEMKDVSKRQPESEELDGAPVEDELDGAPLEDVDGVPIDLGSGLDDLDGVPMKVLDDDLDGVPIDGPEDPKKFQSVFKVAPSKWEAVDEAELESQAVTTSKWELFDQPTESEEDEQPVDSTLKESDDDDDIDDQVPRPEELLYFTNPVKEESVESKPVLKYSEMSEEKRAKLREIELKVMKFQDELESGKRLKKAGQTIQEQVEHYRDKLLQREKEKELERERDKKDKEKDVIKSEYRIKDGKEKESSSSPSSKERKRKHSTSVSPTRIARRAKSPSPRSEWSDRSRTKDSPHTRSTHKNTPRDTNKKSKRSRSGSRTPKRSKRSRSRTPRKSSKKSRSQSRSPHRSHKKSKKSKH
SIO_010081: LOC109918115
subclass of: SO_0000673
so part of: LOC109918115
location: join(5486560..5486616,5490014..5490128,5493737..5493858,5495339..5495406,5495510..5495625,5497355..5497387,5497473..5497555,5498552..5498717,5501323..5501531,5503753..5503796,5513522..5513626,5513744..5513810,5513900..5514057,5516265..5516427,5518235..5518314,5522832..5522919,5526232..5526366,5526501..5526557,5529320..5529479,5532192..5532287,5532628..5532694,5534332..5534506,5534599..5534709,5537375..5537502,5540702..5540866,5550373..5550511)
location: region:5486560-5550511:1
so has part: feature:5486560-5486616:1:exon
so has part: feature:5490014-5490128:1:exon
so has part: feature:5493737-5493858:1:exon
so has part: feature:5495339-5495406:1:exon
so has part: feature:5495510-5495625:1:exon
so has part: feature:5497355-5497387:1:exon
so has part: feature:5497473-5497555:1:exon
so has part: feature:5498552-5498717:1:exon
so has part: feature:5501323-5501531:1:exon
so has part: feature:5503753-5503796:1:exon
so has part: feature:5513522-5513626:1:exon
so has part: feature:5513744-5513810:1:exon
so has part: feature:5513900-5514057:1:exon
so has part: feature:5516265-5516427:1:exon
so has part: feature:5518235-5518314:1:exon
so has part: feature:5522832-5522919:1:exon
so has part: feature:5526232-5526366:1:exon
so has part: feature:5526501-5526557:1:exon
so has part: feature:5529320-5529479:1:exon
so has part: feature:5532192-5532287:1:exon
so has part: feature:5532628-5532694:1:exon
so has part: feature:5534332-5534506:1:exon
so has part: feature:5534599-5534709:1:exon
so has part: feature:5537375-5537502:1:exon
so has part: feature:5540702-5540866:1:exon
so has part: feature:5550373-5550511:1:exon

XP_020373596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5486560-5486616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5490014-5490128:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5493737-5493858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5495339-5495406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5495510-5495625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5497355-5497387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5497473-5497555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5498552-5498717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5501323-5501531:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5503753-5503796:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5513522-5513626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5513744-5513810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5513900-5514057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5516265-5516427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5518235-5518314:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5522832-5522919:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5526232-5526366:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5526501-5526557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5529320-5529479:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5532192-5532287:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5532628-5532694:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5534332-5534506:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5534599-5534709:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5537375-5537502:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5540702-5540866:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5550373-5550511:1:exon

LOC109918115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109918115
product: U2 snRNP-associated SURP domain containing, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020518011.2
SIO_010081: LOC109918115
subclass of: SO_0000673
so part of: LOC109918115
location: join(5501407..5501531,5513522..5513626,5513744..5513810,5513900..5514057,5516265..5516427,5518235..5518314,5522832..5522919,5526232..5526366,5526501..5526557,5529320..5529479,5532192..5532287,5532628..5532694,5534332..5534506,5534599..5534709,5537375..5537502,5540702..5540866,5550373..5550903)
location: region:5501407-5550903:1
so has part: feature:5501407-5501531:1:exon
so has part: feature:5513522-5513626:1:exon
so has part: feature:5513744-5513810:1:exon
so has part: feature:5513900-5514057:1:exon
so has part: feature:5516265-5516427:1:exon
so has part: feature:5518235-5518314:1:exon
so has part: feature:5522832-5522919:1:exon
so has part: feature:5526232-5526366:1:exon
so has part: feature:5526501-5526557:1:exon
so has part: feature:5529320-5529479:1:exon
so has part: feature:5532192-5532287:1:exon
so has part: feature:5532628-5532694:1:exon
so has part: feature:5534332-5534506:1:exon
so has part: feature:5534599-5534709:1:exon
so has part: feature:5537375-5537502:1:exon
so has part: feature:5540702-5540866:1:exon
so has part: feature:5550373-5550903:1:exon

position:5501407:1
position: 5501407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5501407-5501531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5513522-5513626:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5513744-5513810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5513900-5514057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5516265-5516427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5518235-5518314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5522832-5522919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5526232-5526366:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5526501-5526557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5529320-5529479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5532192-5532287:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5532628-5532694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5534332-5534506:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5534599-5534709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5537375-5537502:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5540702-5540866:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5550373-5550903:1:exon

LOC109918115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109918115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X2
translation: MTLKRNLLCVIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQSPAHVYYRWKLYSILQGDSPTKWRTLDFRMFKNGSFWRPPPLNPYLQEILEETESRVEENVKKGQLKEDQRDKLEELLRGLTPRKNDIGDAMVFCLNHAEAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFESKLCQIFANLNATYKSIQGHLQSENFKQRVMGCFRAWEDWTIYPDPFLIKLQNIFLGLVDLEEENKEVCKPQNIYLGLVDVEEMKDVSKRQPESEELDGAPVEDELDGAPLEDVDGVPIDLGSGLDDLDGVPMKVLDDDLDGVPIDGPEDPKKFQSVFKVAPSKWEAVDEAELESQAVTTSKWELFDQPTESEEDEQPVDSTLKESDDDDDIDDQVPRPEELLYFTNPVKEESVESKPVLKYSEMSEEKRAKLREIELKVMKFQDELESGKRLKKAGQTIQEQVEHYRDKLLQREKEKELERERDKKDKEKDVIKSEYRIKDGKEKESSSSPSSKERKRKHSTSVSPTRIARRAKSPSPRSEWSDRSRTKDSPHTRSTHKNTPRDTNKKSKRSRSGSRTPKRSKRSRSRTPRKSSKKSRSQSRSPHRSHKKSKKSKH
SIO_010081: LOC109918115
subclass of: SO_0000673
so part of: LOC109918115
location: join(5501518..5501531,5513522..5513626,5513744..5513810,5513900..5514057,5516265..5516427,5518235..5518314,5522832..5522919,5526232..5526366,5526501..5526557,5529320..5529479,5532192..5532287,5532628..5532694,5534332..5534506,5534599..5534709,5537375..5537502,5540702..5540866,5550373..5550511)
location: region:5501518-5550511:1
so has part: feature:5501518-5501531:1:exon
so has part: feature:5513522-5513626:1:exon
so has part: feature:5513744-5513810:1:exon
so has part: feature:5513900-5514057:1:exon
so has part: feature:5516265-5516427:1:exon
so has part: feature:5518235-5518314:1:exon
so has part: feature:5522832-5522919:1:exon
so has part: feature:5526232-5526366:1:exon
so has part: feature:5526501-5526557:1:exon
so has part: feature:5529320-5529479:1:exon
so has part: feature:5532192-5532287:1:exon
so has part: feature:5532628-5532694:1:exon
so has part: feature:5534332-5534506:1:exon
so has part: feature:5534599-5534709:1:exon
so has part: feature:5537375-5537502:1:exon
so has part: feature:5540702-5540866:1:exon
so has part: feature:5550373-5550511:1:exon

XP_020373600.1
type: Protein
SIO_000068: ncbiprotein

position:5501518:1
position: 5501518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5501518-5501531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5513522-5513626:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5513744-5513810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5513900-5514057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5516265-5516427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5518235-5518314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5522832-5522919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5526232-5526366:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5526501-5526557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5529320-5529479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5532192-5532287:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5532628-5532694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5534332-5534506:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5534599-5534709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5537375-5537502:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5540702-5540866:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5550373-5550511:1:exon

chst2b
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: chst2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5619885..5624303
location: region:5619885-5624303:1
so has part: feature:5619885-5624303:1:exon
subclass of: SO_0000010

125484744
type: Gene
SIO_000068: ncbigene

position:5619885:1
position: 5619885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5624303:1
position: 5624303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5619885-5624303:1:exon

chst2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: chst2b
product: carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604749.1
SIO_010081: chst2b
subclass of: SO_0000673
so part of: chst2b
location: 5619885..5624303
location: region:5619885-5624303:1
so has part: feature:5619885-5624303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5619885-5624303:1:exon

chst2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: chst2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 2
translation: MKVLRRKAALLVLGYILLLVLTMLHFTDYKGAKECTQVKYVPYPLRYTVEHQRPSPPQNSSNRRQHVYVFTTWRSGSSFVGELFNQNPDVFFLYEPMWHIWQKLYPGDALTLQGAARDMLGFLYRCDLSIFQLYNGGNNLTSMGIFGAPRNKVVCSYPLCKAYRKDKVGLIDEHVCKNECPPQHLDSLEAECHKYSTIVIKGVRIFDLNVLAPLMKDPFVDLKVIHLVRDPRAVASSRIKSRNGLIRESLQVMRSKDPKGRRLKVYDGYQRTRRDAVDYHALNALEVICTSMVRTVQMVREPPDWLKDNYRVVRYEDLVEDPIRYLKDMYHFVNLSVSEDIERFMLNMTMGSSYSSKKPFSVSSRNATQAANAWRTQMTYSQIKQVEEYCQQAMDWLGYEKVQTPEEVKDFSKSFVTKIRL
SIO_010081: chst2b
subclass of: SO_0000673
so part of: chst2b
location: 5620419..5621684
location: region:5620419-5621684:1
so has part: feature:5620419-5621684:1:exon

XP_048460706.1
type: Protein
SIO_000068: ncbiprotein

position:5620419:1
position: 5620419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5621684:1
position: 5621684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5620419-5621684:1:exon

LOC109922683
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109922683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5666955..5739939)
location: region:5666955-5739939:-1
so has part: feature:5666955-5739939:-1:exon
subclass of: SO_0000011

109922683
type: Gene
SIO_000068: ncbigene

position:5666955:-1
position: 5666955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5739939:-1
position: 5739939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5666955-5739939:-1:exon

LOC109922683
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109922683
product: uncharacterized LOC109922683
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263551.1
SIO_010081: LOC109922683
subclass of: SO_0000673
so part of: LOC109922683
location: complement(join(5666955..5670410,5683228..5683333,5739854..5739939))
location: region:5666955-5739939:-1
so has part: feature:5739854-5739939:-1:exon
so has part: feature:5683228-5683333:-1:exon
so has part: feature:5666955-5670410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5739854-5739939:-1:exon

position:5739854:-1
position: 5739854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5683228-5683333:-1:exon

position:5683228:-1
position: 5683228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5683333:-1
position: 5683333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5666955-5670410:-1:exon

position:5670410:-1
position: 5670410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484701
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5828455..5882914
location: region:5828455-5882914:1
so has part: feature:5828455-5882914:1:exon
subclass of: SO_0000010

125484701
type: Gene
SIO_000068: ncbigene

position:5828455:1
position: 5828455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5882914:1
position: 5882914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5828455-5882914:1:exon

LOC125484701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484701
product: sodium/hydrogen exchanger 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604492.1
SIO_010081: LOC125484701
subclass of: SO_0000673
so part of: LOC125484701
location: join(5828455..5828577,5832767..5832872,5866327..5866465,5876472..5876577,5882820..5882914)
location: region:5828455-5882914:1
so has part: feature:5828455-5828577:1:exon
so has part: feature:5832767-5832872:1:exon
so has part: feature:5866327-5866465:1:exon
so has part: feature:5876472-5876577:1:exon
so has part: feature:5882820-5882914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5828455-5828577:1:exon

position:5828577:1
position: 5828577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5832767-5832872:1:exon

position:5832767:1
position: 5832767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5832872:1
position: 5832872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5866327-5866465:1:exon

position:5866327:1
position: 5866327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5866465:1
position: 5866465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5876472-5876577:1:exon

position:5876472:1
position: 5876472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5876577:1
position: 5876577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5882820-5882914:1:exon

position:5882820:1
position: 5882820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 9-like
translation: MYGFVMAMISLGQLNRHDFYFTDCLFFGALISATDPVTVLAIFHELNVDVQLYTLLFGESVLNDAVAIVLTYSISIYSPKDNPDTFDAAAFFKSVGNFAWIFAGSFAMGSAYGIVTALLTKFTKLSEFPMLETGIFFLLSWSAFLSAEASDLTVIVLVHYHKGSADVEELLPYLATQTTVSPSK
SIO_010081: LOC125484701
subclass of: SO_0000673
so part of: LOC125484701
location: join(5828469..5828577,5832767..5832872,5866327..5866465,5876472..5876577,5882820..5882914)
location: region:5828469-5882914:1
so has part: feature:5828469-5828577:1:exon
so has part: feature:5832767-5832872:1:exon
so has part: feature:5866327-5866465:1:exon
so has part: feature:5876472-5876577:1:exon
so has part: feature:5882820-5882914:1:exon

XP_048460449.1
type: Protein
SIO_000068: ncbiprotein

position:5828469:1
position: 5828469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5828469-5828577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5832767-5832872:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5866327-5866465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5876472-5876577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5882820-5882914:1:exon

LOC125484685
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5933301..5981963)
location: region:5933301-5981963:-1
so has part: feature:5933301-5981963:-1:exon
subclass of: SO_0000011

125484685
type: Gene
SIO_000068: ncbigene

position:5933301:-1
position: 5933301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5981963:-1
position: 5981963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5933301-5981963:-1:exon

LOC125484685
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484685
product: uncharacterized LOC125484685, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263513.1
SIO_010081: LOC125484685
subclass of: SO_0000673
so part of: LOC125484685
location: complement(join(5933301..5934872,5942249..5942484,5944056..5944152,5969711..5969812,5981707..5981963))
location: region:5933301-5981963:-1
so has part: feature:5981707-5981963:-1:exon
so has part: feature:5969711-5969812:-1:exon
so has part: feature:5944056-5944152:-1:exon
so has part: feature:5942249-5942484:-1:exon
so has part: feature:5933301-5934872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5981707-5981963:-1:exon

position:5981707:-1
position: 5981707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5969711-5969812:-1:exon

position:5969711:-1
position: 5969711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5969812:-1
position: 5969812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5944056-5944152:-1:exon

position:5944056:-1
position: 5944056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5944152:-1
position: 5944152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5942249-5942484:-1:exon

position:5942249:-1
position: 5942249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5942484:-1
position: 5942484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5933301-5934872:-1:exon

position:5934872:-1
position: 5934872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484685
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484685
product: uncharacterized LOC125484685, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263512.1
SIO_010081: LOC125484685
subclass of: SO_0000673
so part of: LOC125484685
location: complement(join(5933301..5934872,5942249..5942484,5969711..5969812,5981707..5981954))
location: region:5933301-5981954:-1
so has part: feature:5981707-5981954:-1:exon
so has part: feature:5969711-5969812:-1:exon
so has part: feature:5942249-5942484:-1:exon
so has part: feature:5933301-5934872:-1:exon

position:5981954:-1
position: 5981954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5981707-5981954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5969711-5969812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5942249-5942484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5933301-5934872:-1:exon

dipk2ab
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: dipk2ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5983296..6197954
location: region:5983296-6197954:1
so has part: feature:5983296-6197954:1:exon
subclass of: SO_0000010

109915069
type: Gene
SIO_000068: ncbigene

position:5983296:1
position: 5983296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6197954:1
position: 6197954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5983296-6197954:1:exon

dipk2ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dipk2ab
product: divergent protein kinase domain 2Ab, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604751.1
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(5983296..5983345,5984350..5984388,6009129..6010008,6084962..6085265,6195781..6197954)
location: region:5983296-6197954:1
so has part: feature:5983296-5983345:1:exon
so has part: feature:5984350-5984388:1:exon
so has part: feature:6009129-6010008:1:exon
so has part: feature:6084962-6085265:1:exon
so has part: feature:6195781-6197954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5983296-5983345:1:exon

position:5983345:1
position: 5983345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5984350-5984388:1:exon

position:5984350:1
position: 5984350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5984388:1
position: 5984388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6009129-6010008:1:exon

position:6009129:1
position: 6009129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6010008:1
position: 6010008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6084962-6085265:1:exon

position:6084962:1
position: 6084962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6085265:1
position: 6085265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6195781-6197954:1:exon

position:6195781:1
position: 6195781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dipk2ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dipk2ab
product: divergent protein kinase domain 2Ab, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604756.1
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(5983321..5983345,6084962..6085265,6195781..6197954)
location: region:5983321-6197954:1
so has part: feature:5983321-5983345:1:exon
so has part: feature:6084962-6085265:1:exon
so has part: feature:6195781-6197954:1:exon

position:5983321:1
position: 5983321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5983321-5983345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6084962-6085265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6195781-6197954:1:exon

dipk2ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dipk2ab
product: divergent protein kinase domain 2Ab, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604754.1
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(5983352..5984388,6009129..6009207,6009475..6010008,6084962..6085265,6195781..6197954)
location: region:5983352-6197954:1
so has part: feature:5983352-5984388:1:exon
so has part: feature:6009129-6009207:1:exon
so has part: feature:6009475-6010008:1:exon
so has part: feature:6084962-6085265:1:exon
so has part: feature:6195781-6197954:1:exon

position:5983352:1
position: 5983352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5983352-5984388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6009129-6009207:1:exon

position:6009207:1
position: 6009207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6009475-6010008:1:exon

position:6009475:1
position: 6009475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6084962-6085265:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6195781-6197954:1:exon

dipk2ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dipk2ab
product: divergent protein kinase domain 2Ab, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604752.1
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(5983352..5983511,5984350..5984388,6009129..6010008,6084962..6085265,6195781..6197954)
location: region:5983352-6197954:1
so has part: feature:5983352-5983511:1:exon
so has part: feature:5984350-5984388:1:exon
so has part: feature:6009129-6010008:1:exon
so has part: feature:6084962-6085265:1:exon
so has part: feature:6195781-6197954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5983352-5983511:1:exon

position:5983511:1
position: 5983511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5984350-5984388:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6009129-6010008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6084962-6085265:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6195781-6197954:1:exon

dipk2ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: dipk2ab
product: divergent protein kinase domain 2Ab, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604755.1
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(5983352..5983511,5984350..5984388,6084962..6085265,6195781..6197954)
location: region:5983352-6197954:1
so has part: feature:5983352-5983511:1:exon
so has part: feature:5984350-5984388:1:exon
so has part: feature:6084962-6085265:1:exon
so has part: feature:6195781-6197954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5983352-5983511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5984350-5984388:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6084962-6085265:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6195781-6197954:1:exon

dipk2ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dipk2ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 2Ab isoform X1
translation: MWRLLTLKFGRLYRCLKFLFVVSLLVFTLLNTHSFIASFQKNELADRRFISLNKCPACFGTSWCRKFMNGQITFETWGRLRILDFLNVKNVYFAQYGEPREGARRIVLKRLGSNQELADMDQKVCKRAIGRPRCDVTQAIYKTQFSRLNGEVRLLTPDIVEGWSDLVHCPSQRLLDRIVRRYAETKDSGSFLMKNLKDSERMQLLLTLAFNPEPLVFQSFPSDEGWPFAKYLGACGRMVAVNYVGNELWNFYNAPWEKRVDLAWQLLEIAEQLTNNDFEFALYLLDVSFDNFAVGPRDGKVIVIDAENIIVADKRLIKQNKPQNWDVWYESTFDDCGKEACLSFSKEVLCSRVTVDHNYYAICQNLLSKYATWRGTTGGLLHSPPVEIVRAGRLEALLEECAHPKKQYGRFQAARELRDYLAKLSNNVR
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(6009355..6010008,6084962..6085265,6195781..6196112)
location: region:6009355-6196112:1
so has part: feature:6009355-6010008:1:exon
so has part: feature:6084962-6085265:1:exon
so has part: feature:6195781-6196112:1:exon

XP_048460708.1
type: Protein
SIO_000068: ncbiprotein

position:6009355:1
position: 6009355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6196112:1
position: 6196112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6009355-6010008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6084962-6085265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6195781-6196112:1:exon

dipk2ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dipk2ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 2Ab isoform X1
translation: MWRLLTLKFGRLYRCLKFLFVVSLLVFTLLNTHSFIASFQKNELADRRFISLNKCPACFGTSWCRKFMNGQITFETWGRLRILDFLNVKNVYFAQYGEPREGARRIVLKRLGSNQELADMDQKVCKRAIGRPRCDVTQAIYKTQFSRLNGEVRLLTPDIVEGWSDLVHCPSQRLLDRIVRRYAETKDSGSFLMKNLKDSERMQLLLTLAFNPEPLVFQSFPSDEGWPFAKYLGACGRMVAVNYVGNELWNFYNAPWEKRVDLAWQLLEIAEQLTNNDFEFALYLLDVSFDNFAVGPRDGKVIVIDAENIIVADKRLIKQNKPQNWDVWYESTFDDCGKEACLSFSKEVLCSRVTVDHNYYAICQNLLSKYATWRGTTGGLLHSPPVEIVRAGRLEALLEECAHPKKQYGRFQAARELRDYLAKLSNNVR
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(6009355..6010008,6084962..6085265,6195781..6196112)
location: region:6009355-6196112:1
so has part: feature:6009355-6010008:1:exon
so has part: feature:6084962-6085265:1:exon
so has part: feature:6195781-6196112:1:exon

XP_048460709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6009355-6010008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6084962-6085265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6195781-6196112:1:exon

dipk2ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dipk2ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 2Ab isoform X2
translation: MNGQITFETWGRLRILDFLNVKNVYFAQYGEPREGARRIVLKRLGSNQELADMDQKVCKRAIGRPRCDVTQAIYKTQFSRLNGEVRLLTPDIVEGWSDLVHCPSQRLLDRIVRRYAETKDSGSFLMKNLKDSERMQLLLTLAFNPEPLVFQSFPSDEGWPFAKYLGACGRMVAVNYVGNELWNFYNAPWEKRVDLAWQLLEIAEQLTNNDFEFALYLLDVSFDNFAVGPRDGKVIVIDAENIIVADKRLIKQNKPQNWDVWYESTFDDCGKEACLSFSKEVLCSRVTVDHNYYAICQNLLSKYATWRGTTGGLLHSPPVEIVRAGRLEALLEECAHPKKQYGRFQAARELRDYLAKLSNNVR
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(6009556..6010008,6084962..6085265,6195781..6196112)
location: region:6009556-6196112:1
so has part: feature:6009556-6010008:1:exon
so has part: feature:6084962-6085265:1:exon
so has part: feature:6195781-6196112:1:exon

XP_048460711.1
type: Protein
SIO_000068: ncbiprotein

position:6009556:1
position: 6009556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6009556-6010008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6084962-6085265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6195781-6196112:1:exon

dipk2ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dipk2ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 2Ab isoform X3
translation: MVAVNYVGNELWNFYNAPWEKRVDLAWQLLEIAEQLTNNDFEFALYLLDVSFDNFAVGPRDGKVIVIDAENIIVADKRLIKQNKPQNWDVWYESTFDDCGKEACLSFSKEVLCSRVTVDHNYYAICQNLLSKYATWRGTTGGLLHSPPVEIVRAGRLEALLEECAHPKKQYGRFQAARELRDYLAKLSNNVR
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(6085019..6085265,6195781..6196112)
location: region:6085019-6196112:1
so has part: feature:6085019-6085265:1:exon
so has part: feature:6195781-6196112:1:exon

XP_048460712.1
type: Protein
SIO_000068: ncbiprotein

position:6085019:1
position: 6085019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6085019-6085265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6195781-6196112:1:exon

dipk2ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: dipk2ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 2Ab isoform X3
translation: MVAVNYVGNELWNFYNAPWEKRVDLAWQLLEIAEQLTNNDFEFALYLLDVSFDNFAVGPRDGKVIVIDAENIIVADKRLIKQNKPQNWDVWYESTFDDCGKEACLSFSKEVLCSRVTVDHNYYAICQNLLSKYATWRGTTGGLLHSPPVEIVRAGRLEALLEECAHPKKQYGRFQAARELRDYLAKLSNNVR
SIO_010081: dipk2ab
subclass of: SO_0000673
so part of: dipk2ab
location: join(6085019..6085265,6195781..6196112)
location: region:6085019-6196112:1
so has part: feature:6085019-6085265:1:exon
so has part: feature:6195781-6196112:1:exon

XP_048460713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6085019-6085265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6195781-6196112:1:exon

LOC125484702
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6567991..6584384)
location: region:6567991-6584384:-1
so has part: feature:6567991-6584384:-1:exon
subclass of: SO_0000010

125484702
type: Gene
SIO_000068: ncbigene

position:6567991:-1
position: 6567991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6584384:-1
position: 6584384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6567991-6584384:-1:exon

LOC125484702
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484702
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604493.1
SIO_010081: LOC125484702
subclass of: SO_0000673
so part of: LOC125484702
location: complement(join(6567991..6568029,6569906..6570031,6570645..6570791,6571361..6571465,6573213..6573278,6579420..6579533,6583697..6584384))
location: region:6567991-6584384:-1
so has part: feature:6583697-6584384:-1:exon
so has part: feature:6579420-6579533:-1:exon
so has part: feature:6573213-6573278:-1:exon
so has part: feature:6571361-6571465:-1:exon
so has part: feature:6570645-6570791:-1:exon
so has part: feature:6569906-6570031:-1:exon
so has part: feature:6567991-6568029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6583697-6584384:-1:exon

position:6583697:-1
position: 6583697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6579420-6579533:-1:exon

position:6579420:-1
position: 6579420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6579533:-1
position: 6579533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6573213-6573278:-1:exon

position:6573213:-1
position: 6573213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6573278:-1
position: 6573278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6571361-6571465:-1:exon

position:6571361:-1
position: 6571361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6571465:-1
position: 6571465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6570645-6570791:-1:exon

position:6570645:-1
position: 6570645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6570791:-1
position: 6570791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6569906-6570031:-1:exon

position:6569906:-1
position: 6569906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6570031:-1
position: 6570031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6567991-6568029:-1:exon

position:6568029:-1
position: 6568029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484702
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like
translation: MFKPPKGIFMYVSNQHEFGRLLPTENYNASHVHGDLWEIFANPLDWREKYIHPSYTEIFTGNVVEEPCPDVFWFPIFSETTCDELVEEVENYGIWSGGKNEDSRLVGGYENVPTDDIHMTQVGLDQVWLQFIREYIAPVALKLFSGYHTKGFAMLNFVVKYTPERQAYLRPHHDSSTFTINIALNNKGIDYQKTDHVQVIPDML
SIO_010081: LOC125484702
subclass of: SO_0000673
so part of: LOC125484702
location: complement(join(6567991..6568029,6569906..6570031,6570645..6570791,6571361..6571465,6573213..6573278,6579420..6579533,6583697..6583714))
location: region:6567991-6583714:-1
so has part: feature:6583697-6583714:-1:exon
so has part: feature:6579420-6579533:-1:exon
so has part: feature:6573213-6573278:-1:exon
so has part: feature:6571361-6571465:-1:exon
so has part: feature:6570645-6570791:-1:exon
so has part: feature:6569906-6570031:-1:exon
so has part: feature:6567991-6568029:-1:exon

XP_048460450.1
type: Protein
SIO_000068: ncbiprotein

position:6583714:-1
position: 6583714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6583697-6583714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6579420-6579533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6573213-6573278:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6571361-6571465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6570645-6570791:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6569906-6570031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6567991-6568029:-1:exon

LOC125484690
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6639660..6708468)
location: region:6639660-6708468:-1
so has part: feature:6639660-6708468:-1:exon
subclass of: SO_0000010

125484690
type: Gene
SIO_000068: ncbigene

position:6639660:-1
position: 6639660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6708468:-1
position: 6708468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6639660-6708468:-1:exon

LOC125484690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484690
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048604424.1
SIO_010081: LOC125484690
subclass of: SO_0000673
so part of: LOC125484690
location: complement(join(6639660..6639779,6646331..6646467,6650018..6650109,6708241..6708468))
location: region:6639660-6708468:-1
so has part: feature:6708241-6708468:-1:exon
so has part: feature:6650018-6650109:-1:exon
so has part: feature:6646331-6646467:-1:exon
so has part: feature:6639660-6639779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6708241-6708468:-1:exon

position:6708241:-1
position: 6708241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6650018-6650109:-1:exon

position:6650018:-1
position: 6650018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6650109:-1
position: 6650109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6646331-6646467:-1:exon

position:6646331:-1
position: 6646331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6646467:-1
position: 6646467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6639660-6639779:-1:exon

position:6639779:-1
position: 6639779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like
translation: MAVQFVGFPLLTLLVLLLSLTFLISSGSEQPPIPNENLLVLTVATKETDGFKRFMQTAKHLNYTVKVLGAEEEWRGGNIPHSIGGGQKVRLLKEEMQNHADRDDLVVLFTDRIKHGWLGTFIALAKVQVNHGLNC
SIO_010081: LOC125484690
subclass of: SO_0000673
so part of: LOC125484690
location: complement(join(6639707..6639779,6646331..6646467,6650018..6650109,6708241..6708346))
location: region:6639707-6708346:-1
so has part: feature:6708241-6708346:-1:exon
so has part: feature:6650018-6650109:-1:exon
so has part: feature:6646331-6646467:-1:exon
so has part: feature:6639707-6639779:-1:exon

XP_048460381.1
type: Protein
SIO_000068: ncbiprotein

position:6639707:-1
position: 6639707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6708346:-1
position: 6708346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6708241-6708346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6650018-6650109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6646331-6646467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6639707-6639779:-1:exon

LOC109931762
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109931762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6817138..6834562)
location: region:6817138-6834562:-1
so has part: feature:6817138-6834562:-1:exon
subclass of: SO_0000010

109931762
type: Gene
SIO_000068: ncbigene

position:6817138:-1
position: 6817138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6834562:-1
position: 6834562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6817138-6834562:-1:exon

LOC109931762
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109931762
product: phospholipid scramblase 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604156.1
SIO_010081: LOC109931762
subclass of: SO_0000673
so part of: LOC109931762
location: complement(join(6817138..6817902,6818008..6818066,6828354..6828515,6830932..6831093,6832752..6832972,6834431..6834562))
location: region:6817138-6834562:-1
so has part: feature:6834431-6834562:-1:exon
so has part: feature:6832752-6832972:-1:exon
so has part: feature:6830932-6831093:-1:exon
so has part: feature:6828354-6828515:-1:exon
so has part: feature:6818008-6818066:-1:exon
so has part: feature:6817138-6817902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6834431-6834562:-1:exon

position:6834431:-1
position: 6834431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6832752-6832972:-1:exon

position:6832752:-1
position: 6832752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6832972:-1
position: 6832972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6830932-6831093:-1:exon

position:6830932:-1
position: 6830932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6831093:-1
position: 6831093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6828354-6828515:-1:exon

position:6828354:-1
position: 6828354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6828515:-1
position: 6828515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6818008-6818066:-1:exon

position:6818008:-1
position: 6818008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6818066:-1
position: 6818066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6817138-6817902:-1:exon

position:6817902:-1
position: 6817902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109931762
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109931762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase 1-like
translation: MKILDNLGQEVINLYRPLRCAGCCCPCCLQEMEVKAPPGEPIGYVVQTWDLCLPKFTIQNDKKEPVLKIIGPCCICNCCNDIDFKVTNLDESETVGKISKQWTGLAREAFTDATNFGIQFPMDLDVKIKAVMLGACFLIDYVFFERNE
SIO_010081: LOC109931762
subclass of: SO_0000673
so part of: LOC109931762
location: complement(join(6818037..6818066,6828354..6828515,6830932..6831093,6832752..6832844))
location: region:6818037-6832844:-1
so has part: feature:6832752-6832844:-1:exon
so has part: feature:6830932-6831093:-1:exon
so has part: feature:6828354-6828515:-1:exon
so has part: feature:6818037-6818066:-1:exon

XP_048460113.1
type: Protein
SIO_000068: ncbiprotein

position:6818037:-1
position: 6818037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6832844:-1
position: 6832844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6832752-6832844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6830932-6831093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6828354-6828515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6818037-6818066:-1:exon

LOC109915610
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109915610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7826196..7830898)
location: region:7826196-7830898:-1
so has part: feature:7826196-7830898:-1:exon
subclass of: SO_0000010

109915610
type: Gene
SIO_000068: ncbigene

position:7826196:-1
position: 7826196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7830898:-1
position: 7830898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7826196-7830898:-1:exon

LOC109915610
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109915610
product: zic family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71 Proteins
transcript id: XM_020515262.1
SIO_010081: LOC109915610
subclass of: SO_0000673
so part of: LOC109915610
location: complement(join(7826196..7826632,7829734..7830898))
location: region:7826196-7830898:-1
so has part: feature:7829734-7830898:-1:exon
so has part: feature:7826196-7826632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7829734-7830898:-1:exon

position:7829734:-1
position: 7829734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7826196-7826632:-1:exon

position:7826632:-1
position: 7826632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109915610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109915610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 4
translation: MSMDALGSQMMDPSSFAKRNPALRLVDLAGAHNHHHHHPPQNMTGFPGLSGHPHSMAHTHPGENTGEPRLGPSPFGPEHMGHPAAAAALKLSPTHPHHHHLHHHHHHMAGHAEVVSNPTAAFGPAQAATAVRYSVSHSHASYTAQTISAGRDFLIRRDLTSSVMPGLTDQYPGTSSHHGMFVSTTGSYPGHHGHPETGNHSLFPGLHDQPPLAVPAGHHLNGQLRLGLPGDMYARSEHYSQVASSRSDPFASSPLHGYGGMNINMNITGHHGPGAFFRYMRQPIKQELICKWTEPDPVTKKPCSKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHSHVHTSDKPYNCKVRGCDKSYTHPSSLRKHMKVHCKSPPPSSGYESSTPSLVSPSSDLGRDPPASASQLDPITSSHAANLSEWYVCQSTGASGIPTPPSNSSSPGPGEHSYRNSDPRTIL
SIO_010081: LOC109915610
subclass of: SO_0000673
so part of: LOC109915610
location: complement(join(7826196..7826632,7829734..7830898))
location: region:7826196-7830898:-1
so has part: feature:7829734-7830898:-1:exon
so has part: feature:7826196-7826632:-1:exon

XP_020370851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7829734-7830898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7826196-7826632:-1:exon

LOC109915611
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109915611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7843571..7847263
location: region:7843571-7847263:1
so has part: feature:7843571-7847263:1:exon
subclass of: SO_0000010

109915611
type: Gene
SIO_000068: ncbigene

position:7843571:1
position: 7843571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7847263:1
position: 7847263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7843571-7847263:1:exon

LOC109915611
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109915611
product: zic family member 1 (odd-paired homolog, Drosophila)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020515263.2
SIO_010081: LOC109915611
subclass of: SO_0000673
so part of: LOC109915611
location: join(7843571..7844565,7846080..7846243,7846701..7847263)
location: region:7843571-7847263:1
so has part: feature:7843571-7844565:1:exon
so has part: feature:7846080-7846243:1:exon
so has part: feature:7846701-7847263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7843571-7844565:1:exon

position:7844565:1
position: 7844565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7846080-7846243:1:exon

position:7846080:1
position: 7846080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7846243:1
position: 7846243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7846701-7847263:1:exon

position:7846701:1
position: 7846701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109915611
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109915611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 1
translation: MLLDAGPQYPTLGVTTFGSSRHHSTGDVNDREVGLGINPFADGMGAFKISPSTHDLASGQTAFTSQAPGYAAALGHHPSHVSSYSSAAFNSTRDFLFRNRGFGEAAAAASAGHSLFASAAAAGSFAGPHGHTDAAGHLLFPGLHEQATSHASPNAHVMNGQMRLGFSGDMYGRADQYSQVTSPRSDHYASTQLHSYGPMNMNMAAHHGAGAFFRYMRQPIKQELICKWVEPEQLTNPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNHVCFWEECSREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSLRKHMKVHEASSQGSQPSPAASSGYESSTPPTIVSPSTENQTNSSMSPTSSAVHHTSNHSTLSSNFNEWYV
SIO_010081: LOC109915611
subclass of: SO_0000673
so part of: LOC109915611
location: join(7843587..7844565,7846080..7846243,7846701..7846898)
location: region:7843587-7846898:1
so has part: feature:7843587-7844565:1:exon
so has part: feature:7846080-7846243:1:exon
so has part: feature:7846701-7846898:1:exon

XP_020370852.2
type: Protein
SIO_000068: ncbiprotein

position:7843587:1
position: 7843587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7846898:1
position: 7846898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7843587-7844565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7846080-7846243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7846701-7846898:1:exon

agtr1a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: agtr1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9077834..9114820
location: region:9077834-9114820:1
so has part: feature:9077834-9114820:1:exon
subclass of: SO_0000010

109915788
type: Gene
SIO_000068: ncbigene

position:9077834:1
position: 9077834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9114820:1
position: 9114820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9077834-9114820:1:exon

agtr1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: agtr1a
product: angiotensin II receptor, type 1a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604495.1
SIO_010081: agtr1a
subclass of: SO_0000673
so part of: agtr1a
location: join(9077834..9077891,9080512..9080740,9112444..9114820)
location: region:9077834-9114820:1
so has part: feature:9077834-9077891:1:exon
so has part: feature:9080512-9080740:1:exon
so has part: feature:9112444-9114820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9077834-9077891:1:exon

position:9077891:1
position: 9077891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9080512-9080740:1:exon

position:9080512:1
position: 9080512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9080740:1
position: 9080740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9112444-9114820:1:exon

position:9112444:1
position: 9112444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

agtr1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: agtr1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type-1 angiotensin II receptor
translation: MTLSTKQHLTGHNLEALDELFLSDRVNQLLQIGKGEADHHLRLALSSAPCGCQAEHKRISAVTFSAVQLRHVFTPLSGHLQITNRLRPRARTSISRIPDVNWTQMASNSSVFHNLTSGLALDIEETLLNNSSENAIGKTNLTCTIGGRHNYIFLIIPVIYSIIFAVGVLGNSMVVLVIYRYLKLTTVANIFLLNLALADLIFIITLPLWVAYTALEYHWPFGIFLCKMGTTIVQLNMNASVFLITCLSIDRYLAIVHPMKSRTKRTLVHAWVVCIIVWILAVLVSLPQMFLREVIHYKEWNKTICAFYYPEKHKTQWILGMALLKTLLGFLIPLLIILICYTLIVKSLVQAFQIERSKPANNEAFKLIVAVVVSFILCWLPFQIFTFLDVLSRLKIIEHCHITEIIDTSIPFTICVAYFNSCLNPILYGLVGQSFRRKFFLLLKCVPPKIRSHPSLSTKMSSLSYRTIESLSAITKKPVSSSQQ
SIO_010081: agtr1a
subclass of: SO_0000673
so part of: agtr1a
location: join(9077834..9077891,9080512..9080740,9112444..9113611)
location: region:9077834-9113611:1
so has part: feature:9077834-9077891:1:exon
so has part: feature:9080512-9080740:1:exon
so has part: feature:9112444-9113611:1:exon

XP_048460452.1
type: Protein
SIO_000068: ncbiprotein

position:9113611:1
position: 9113611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9077834-9077891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9080512-9080740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9112444-9113611:1:exon

cpb1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cpb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9123622..9142977
location: region:9123622-9142977:1
so has part: feature:9123622-9142977:1:exon
subclass of: SO_0000010

109915631
type: Gene
SIO_000068: ncbigene

position:9123622:1
position: 9123622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9142977:1
position: 9142977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9123622-9142977:1:exon

cpb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cpb1
product: carboxypeptidase B1 (tissue), transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020515283.2
SIO_010081: cpb1
subclass of: SO_0000673
so part of: cpb1
location: join(9123622..9123749,9123859..9123934,9124022..9124146,9124241..9124343,9128368..9128469,9129872..9129976,9131835..9131945,9134104..9134194,9136018..9136220,9138337..9138421,9142743..9142977)
location: region:9123622-9142977:1
so has part: feature:9123622-9123749:1:exon
so has part: feature:9123859-9123934:1:exon
so has part: feature:9124022-9124146:1:exon
so has part: feature:9124241-9124343:1:exon
so has part: feature:9128368-9128469:1:exon
so has part: feature:9129872-9129976:1:exon
so has part: feature:9131835-9131945:1:exon
so has part: feature:9134104-9134194:1:exon
so has part: feature:9136018-9136220:1:exon
so has part: feature:9138337-9138421:1:exon
so has part: feature:9142743-9142977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9123622-9123749:1:exon

position:9123749:1
position: 9123749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9123859-9123934:1:exon

position:9123859:1
position: 9123859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9123934:1
position: 9123934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9124022-9124146:1:exon

position:9124022:1
position: 9124022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9124146:1
position: 9124146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9124241-9124343:1:exon

position:9124241:1
position: 9124241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9124343:1
position: 9124343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9128368-9128469:1:exon

position:9128368:1
position: 9128368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9128469:1
position: 9128469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9129872-9129976:1:exon

position:9129872:1
position: 9129872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9129976:1
position: 9129976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9131835-9131945:1:exon

position:9131835:1
position: 9131835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9131945:1
position: 9131945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9134104-9134194:1:exon

position:9134104:1
position: 9134104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9134194:1
position: 9134194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9136018-9136220:1:exon

position:9136018:1
position: 9136018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9136220:1
position: 9136220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9138337-9138421:1:exon

position:9138337:1
position: 9138337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9138421:1
position: 9138421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9142743-9142977:1:exon

position:9142743:1
position: 9142743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cpb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cpb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase B isoform X1
translation: MKILCLLGLVSAVLSGPASQRFDGEKVFRLKPTSDQGVWFVKGLADFAKVDFWRPDSIDQVTVGANVDFRVGAQNVAKVQELLEESGLEYEVLIEDLQEMIEQQLDNKERSAASHSYVKYNDLDTINAWITSTVARNSNLMSLMEIGTSYEGRSIHVIKIGKKANQPKPAIFMDCGIHAREWISPAFCQWFVKEAVSTYGSDPIMTKVLDTVDFFVVPIINVDGYAFTWSNNRMWRKTRSKIPGSYCRGVDPNRNWDAGWCTVGASTNPCAETYCGPRVESEKEVQAVANFIRRHKESIKAYLTMHSYSQMCLFPYSYTYDLAANHNELNDIAKGAIRSLASLYGTQYTYGPGATTIYLAAGGSDDWAYDLGIKYSFTFELRDTGRYGFLLPESQIQPTCEETMLAIKYVANYVINNLY
SIO_010081: cpb1
subclass of: SO_0000673
so part of: cpb1
location: join(9123679..9123749,9123859..9123934,9124022..9124146,9124241..9124343,9128368..9128469,9129872..9129976,9131835..9131945,9134104..9134194,9136018..9136220,9138337..9138421,9142743..9142930)
location: region:9123679-9142930:1
so has part: feature:9123679-9123749:1:exon
so has part: feature:9123859-9123934:1:exon
so has part: feature:9124022-9124146:1:exon
so has part: feature:9124241-9124343:1:exon
so has part: feature:9128368-9128469:1:exon
so has part: feature:9129872-9129976:1:exon
so has part: feature:9131835-9131945:1:exon
so has part: feature:9134104-9134194:1:exon
so has part: feature:9136018-9136220:1:exon
so has part: feature:9138337-9138421:1:exon
so has part: feature:9142743-9142930:1:exon

XP_020370872.1
type: Protein
SIO_000068: ncbiprotein

position:9123679:1
position: 9123679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9142930:1
position: 9142930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9123679-9123749:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9123859-9123934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9124022-9124146:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9124241-9124343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9128368-9128469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9129872-9129976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9131835-9131945:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9134104-9134194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9136018-9136220:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9138337-9138421:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9142743-9142930:1:exon

cpb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cpb1
product: carboxypeptidase B1 (tissue), transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604821.1
SIO_010081: cpb1
subclass of: SO_0000673
so part of: cpb1
location: join(9124072..9124187,9128368..9128469,9129872..9129976,9131835..9131945,9134104..9134194,9136018..9136220,9138337..9138421,9142743..9142977)
location: region:9124072-9142977:1
so has part: feature:9124072-9124187:1:exon
so has part: feature:9128368-9128469:1:exon
so has part: feature:9129872-9129976:1:exon
so has part: feature:9131835-9131945:1:exon
so has part: feature:9134104-9134194:1:exon
so has part: feature:9136018-9136220:1:exon
so has part: feature:9138337-9138421:1:exon
so has part: feature:9142743-9142977:1:exon

position:9124072:1
position: 9124072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9124072-9124187:1:exon

position:9124187:1
position: 9124187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9128368-9128469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9129872-9129976:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9131835-9131945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9134104-9134194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9136018-9136220:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9138337-9138421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9142743-9142977:1:exon

cpb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cpb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase B isoform X2
translation: MSLMEIGTSYEGRSIHVIKIGKKANQPKPAIFMDCGIHAREWISPAFCQWFVKEAVSTYGSDPIMTKVLDTVDFFVVPIINVDGYAFTWSNNRMWRKTRSKIPGSYCRGVDPNRNWDAGWCTVGASTNPCAETYCGPRVESEKEVQAVANFIRRHKESIKAYLTMHSYSQMCLFPYSYTYDLAANHNELNDIAKGAIRSLASLYGTQYTYGPGATTIYLAAGGSDDWAYDLGIKYSFTFELRDTGRYGFLLPESQIQPTCEETMLAIKYVANYVINNLY
SIO_010081: cpb1
subclass of: SO_0000673
so part of: cpb1
location: join(9128413..9128469,9129872..9129976,9131835..9131945,9134104..9134194,9136018..9136220,9138337..9138421,9142743..9142930)
location: region:9128413-9142930:1
so has part: feature:9128413-9128469:1:exon
so has part: feature:9129872-9129976:1:exon
so has part: feature:9131835-9131945:1:exon
so has part: feature:9134104-9134194:1:exon
so has part: feature:9136018-9136220:1:exon
so has part: feature:9138337-9138421:1:exon
so has part: feature:9142743-9142930:1:exon

XP_048460778.1
type: Protein
SIO_000068: ncbiprotein

position:9128413:1
position: 9128413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9128413-9128469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9129872-9129976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9131835-9131945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9134104-9134194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9136018-9136220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9138337-9138421:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9142743-9142930:1:exon

LOC109915630
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109915630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9154520..9183407
location: region:9154520-9183407:1
so has part: feature:9154520-9183407:1:exon
subclass of: SO_0000010

109915630
type: Gene
SIO_000068: ncbigene

position:9154520:1
position: 9154520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9183407:1
position: 9183407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9154520-9183407:1:exon

LOC109915630
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109915630
product: carboxypeptidase B-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604265.1
SIO_010081: LOC109915630
subclass of: SO_0000673
so part of: LOC109915630
location: join(9154520..9154688,9155450..9155525,9155616..9155740,9157643..9157745,9160617..9160718,9160873..9160977,9161079..9161189,9162156..9162246,9167653..9167852,9172827..9172911,9175971..9176012,9183093..9183407)
location: region:9154520-9183407:1
so has part: feature:9154520-9154688:1:exon
so has part: feature:9155450-9155525:1:exon
so has part: feature:9155616-9155740:1:exon
so has part: feature:9157643-9157745:1:exon
so has part: feature:9160617-9160718:1:exon
so has part: feature:9160873-9160977:1:exon
so has part: feature:9161079-9161189:1:exon
so has part: feature:9162156-9162246:1:exon
so has part: feature:9167653-9167852:1:exon
so has part: feature:9172827-9172911:1:exon
so has part: feature:9175971-9176012:1:exon
so has part: feature:9183093-9183407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9154520-9154688:1:exon

position:9154688:1
position: 9154688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9155450-9155525:1:exon

position:9155450:1
position: 9155450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9155525:1
position: 9155525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9155616-9155740:1:exon

position:9155616:1
position: 9155616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9155740:1
position: 9155740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9157643-9157745:1:exon

position:9157643:1
position: 9157643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9157745:1
position: 9157745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9160617-9160718:1:exon

position:9160617:1
position: 9160617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9160718:1
position: 9160718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9160873-9160977:1:exon

position:9160873:1
position: 9160873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9160977:1
position: 9160977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9161079-9161189:1:exon

position:9161079:1
position: 9161079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9161189:1
position: 9161189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9162156-9162246:1:exon

position:9162156:1
position: 9162156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9162246:1
position: 9162246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9167653-9167852:1:exon

position:9167653:1
position: 9167653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9167852:1
position: 9167852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9172827-9172911:1:exon

position:9172827:1
position: 9172827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9172911:1
position: 9172911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9175971-9176012:1:exon

position:9175971:1
position: 9175971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9176012:1
position: 9176012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9183093-9183407:1:exon

position:9183093:1
position: 9183093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109915630
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109915630
product: carboxypeptidase B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020515282.2
SIO_010081: LOC109915630
subclass of: SO_0000673
so part of: LOC109915630
location: join(9154520..9154688,9155450..9155525,9155616..9155740,9157643..9157745,9160617..9160718,9160873..9160977,9161079..9161189,9162156..9162246,9167653..9167852,9172827..9172911,9175971..9176315)
location: region:9154520-9176315:1
so has part: feature:9154520-9154688:1:exon
so has part: feature:9155450-9155525:1:exon
so has part: feature:9155616-9155740:1:exon
so has part: feature:9157643-9157745:1:exon
so has part: feature:9160617-9160718:1:exon
so has part: feature:9160873-9160977:1:exon
so has part: feature:9161079-9161189:1:exon
so has part: feature:9162156-9162246:1:exon
so has part: feature:9167653-9167852:1:exon
so has part: feature:9172827-9172911:1:exon
so has part: feature:9175971-9176315:1:exon

position:9176315:1
position: 9176315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9154520-9154688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9155450-9155525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9155616-9155740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9157643-9157745:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9160617-9160718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9160873-9160977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9161079-9161189:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9162156-9162246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9167653-9167852:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9172827-9172911:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9175971-9176315:1:exon

LOC109915630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109915630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase B-like isoform X2
translation: MERLLFLSFVTTVSVGATVGQQAGGKVFRLKPENEQDLQFLKNVSHTGKVDFWLPHSIDLVTTDRTVDFRVGADWTSHVQAGLEKIGLKYDVLIENVQSLMEKQFDRNATDSTGYNYEGYHQWNEIESWITKITIKNPRLISRFEIGQSYEERGIYLLRVGKRTGFMKPAIFMDCGIHAREWISPAFCQWFVKEAVTNYGIDSTMTALLDKLDFLIVPVINVDGYVYSWTKDRFWRKTRSKNPGSNCVGTDPNRNFDVKWCSVGASRNPCDETYCGSHAESEKEVKAVANFIRQYYGIKAYITIHSYSQMCLFPYSYTYSLASNYKELNALARNAVKALSSLHGTQYEYGPASIVIYPSAGGSDDWAYDLEQKSRSSPQCSGEIDLVEDVAYKLEGN
SIO_010081: LOC109915630
subclass of: SO_0000673
so part of: LOC109915630
location: join(9154618..9154688,9155450..9155525,9155616..9155740,9157643..9157745,9160617..9160718,9160873..9160977,9161079..9161189,9162156..9162246,9167653..9167852,9172827..9172911,9175971..9176012,9183093..9183175)
location: region:9154618-9183175:1
so has part: feature:9154618-9154688:1:exon
so has part: feature:9155450-9155525:1:exon
so has part: feature:9155616-9155740:1:exon
so has part: feature:9157643-9157745:1:exon
so has part: feature:9160617-9160718:1:exon
so has part: feature:9160873-9160977:1:exon
so has part: feature:9161079-9161189:1:exon
so has part: feature:9162156-9162246:1:exon
so has part: feature:9167653-9167852:1:exon
so has part: feature:9172827-9172911:1:exon
so has part: feature:9175971-9176012:1:exon
so has part: feature:9183093-9183175:1:exon

XP_048460222.1
type: Protein
SIO_000068: ncbiprotein

position:9154618:1
position: 9154618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9183175:1
position: 9183175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9154618-9154688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9155450-9155525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9155616-9155740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9157643-9157745:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9160617-9160718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9160873-9160977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9161079-9161189:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9162156-9162246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9167653-9167852:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9172827-9172911:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9175971-9176012:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9183093-9183175:1:exon

LOC109915630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109915630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase B-like isoform X1
translation: MERLLFLSFVTTVSVGATVGQQAGGKVFRLKPENEQDLQFLKNVSHTGKVDFWLPHSIDLVTTDRTVDFRVGADWTSHVQAGLEKIGLKYDVLIENVQSLMEKQFDRNATDSTGYNYEGYHQWNEIESWITKITIKNPRLISRFEIGQSYEERGIYLLRVGKRTGFMKPAIFMDCGIHAREWISPAFCQWFVKEAVTNYGIDSTMTALLDKLDFLIVPVINVDGYVYSWTKDRFWRKTRSKNPGSNCVGTDPNRNFDVKWCSVGASRNPCDETYCGSHAESEKEVKAVANFIRQYYGIKAYITIHSYSQMCLFPYSYTYSLASNYKELNALARNAVKALSSLHGTQYEYGPASIVIYPSAGGSDDWAYDLGIKYSFTFELRDTGRYGFLLPESQIKPTCEETMLAINYIAAYVLNHPY
SIO_010081: LOC109915630
subclass of: SO_0000673
so part of: LOC109915630
location: join(9154618..9154688,9155450..9155525,9155616..9155740,9157643..9157745,9160617..9160718,9160873..9160977,9161079..9161189,9162156..9162246,9167653..9167852,9172827..9172911,9175971..9176158)
location: region:9154618-9176158:1
so has part: feature:9154618-9154688:1:exon
so has part: feature:9155450-9155525:1:exon
so has part: feature:9155616-9155740:1:exon
so has part: feature:9157643-9157745:1:exon
so has part: feature:9160617-9160718:1:exon
so has part: feature:9160873-9160977:1:exon
so has part: feature:9161079-9161189:1:exon
so has part: feature:9162156-9162246:1:exon
so has part: feature:9167653-9167852:1:exon
so has part: feature:9172827-9172911:1:exon
so has part: feature:9175971-9176158:1:exon

XP_020370871.2
type: Protein
SIO_000068: ncbiprotein

position:9176158:1
position: 9176158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9154618-9154688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9155450-9155525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9155616-9155740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9157643-9157745:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9160617-9160718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9160873-9160977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9161079-9161189:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9162156-9162246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9167653-9167852:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9172827-9172911:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9175971-9176158:1:exon

LOC109915629
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109915629
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9187079..9205911)
location: region:9187079-9205911:-1
so has part: feature:9187079-9205911:-1:exon
subclass of: SO_0000010

109915629
type: Gene
SIO_000068: ncbigene

position:9187079:-1
position: 9187079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9205911:-1
position: 9205911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9187079-9205911:-1:exon

LOC109915629
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109915629
product: carboxypeptidase B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604412.1
SIO_010081: LOC109915629
subclass of: SO_0000673
so part of: LOC109915629
location: complement(join(9187079..9187266,9195454..9195538,9200033..9200235,9200817..9200907,9202062..9202172,9202278..9202382,9202523..9202624,9205263..9205365,9205471..9205595,9205677..9205752,9205841..9205911))
location: region:9187079-9205911:-1
so has part: feature:9205841-9205911:-1:exon
so has part: feature:9205677-9205752:-1:exon
so has part: feature:9205471-9205595:-1:exon
so has part: feature:9205263-9205365:-1:exon
so has part: feature:9202523-9202624:-1:exon
so has part: feature:9202278-9202382:-1:exon
so has part: feature:9202062-9202172:-1:exon
so has part: feature:9200817-9200907:-1:exon
so has part: feature:9200033-9200235:-1:exon
so has part: feature:9195454-9195538:-1:exon
so has part: feature:9187079-9187266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9205841-9205911:-1:exon

position:9205841:-1
position: 9205841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9205677-9205752:-1:exon

position:9205677:-1
position: 9205677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9205752:-1
position: 9205752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9205471-9205595:-1:exon

position:9205471:-1
position: 9205471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9205595:-1
position: 9205595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9205263-9205365:-1:exon

position:9205263:-1
position: 9205263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9205365:-1
position: 9205365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9202523-9202624:-1:exon

position:9202523:-1
position: 9202523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9202624:-1
position: 9202624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9202278-9202382:-1:exon

position:9202278:-1
position: 9202278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9202382:-1
position: 9202382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9202062-9202172:-1:exon

position:9202062:-1
position: 9202062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9202172:-1
position: 9202172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9200817-9200907:-1:exon

position:9200817:-1
position: 9200817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9200907:-1
position: 9200907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9200033-9200235:-1:exon

position:9200033:-1
position: 9200033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9200235:-1
position: 9200235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9195454-9195538:-1:exon

position:9195454:-1
position: 9195454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9195538:-1
position: 9195538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9187079-9187266:-1:exon

position:9187266:-1
position: 9187266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109915629
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109915629
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(9200198..9200200),aa:OTHER)
product: LOW QUALITY PROTEIN: carboxypeptidase B-like
translation: MHTLLLLGLVVAVAGSGPAGLYQGDKVLRLIPENDLHLQFLRNASRTGKVDFWHPHSIDLVTTGKGVDFRVAAHWSSDIQAELEKIGLKYEILTENLQILIENQFDQIRTRSFSYDYKSYHNWDQIESWTATIAKENPNLISRLVIGQSYEGRDIYLLQVGKRTGSPKPAIFMDCGIHAREWISPAFCQWFVKGAVRTYGTRSPLNSLVNEMDFLVIPVVNVDGYVYSWTEDRLWRKTRSRNFDSDCVGTDPNRNFNAEWCTNGSSRNPCSAIXCGPYAESEKEVKAVADFIRNHSSIIKAYLTIHSYGQKCLFPYSYTYSLAFNNNELANLAQNAVQALKSLYGTEYTFGSGLSSMYLASGGLDDWAYDLGIKYSFTFELRDTGKYGFLLPETQIRPTCEETMLAINYIATYVLNHLY
SIO_010081: LOC109915629
subclass of: SO_0000673
so part of: LOC109915629
location: complement(join(9187079..9187266,9195454..9195538,9200033..9200235,9200817..9200907,9202062..9202172,9202278..9202382,9202523..9202624,9205263..9205365,9205471..9205595,9205677..9205752,9205841..9205911))
location: region:9187079-9205911:-1
so has part: feature:9205841-9205911:-1:exon
so has part: feature:9205677-9205752:-1:exon
so has part: feature:9205471-9205595:-1:exon
so has part: feature:9205263-9205365:-1:exon
so has part: feature:9202523-9202624:-1:exon
so has part: feature:9202278-9202382:-1:exon
so has part: feature:9202062-9202172:-1:exon
so has part: feature:9200817-9200907:-1:exon
so has part: feature:9200033-9200235:-1:exon
so has part: feature:9195454-9195538:-1:exon
so has part: feature:9187079-9187266:-1:exon

XP_048460369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9205841-9205911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9205677-9205752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9205471-9205595:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9205263-9205365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9202523-9202624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9202278-9202382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9202062-9202172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9200817-9200907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9200033-9200235:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9195454-9195538:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9187079-9187266:-1:exon

LOC109924198
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9278763..9330910
location: region:9278763-9330910:1
so has part: feature:9278763-9330910:1:exon
subclass of: SO_0000010

109924198
type: Gene
SIO_000068: ncbigene

position:9278763:1
position: 9278763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9330910:1
position: 9330910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9278763-9330910:1:exon

LOC109924198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924198
product: glycogenin-1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604236.1
SIO_010081: LOC109924198
subclass of: SO_0000673
so part of: LOC109924198
location: join(9278763..9279064,9285109..9285271,9316700..9316826,9325704..9325926,9330067..9330910)
location: region:9278763-9330910:1
so has part: feature:9278763-9279064:1:exon
so has part: feature:9285109-9285271:1:exon
so has part: feature:9316700-9316826:1:exon
so has part: feature:9325704-9325926:1:exon
so has part: feature:9330067-9330910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9278763-9279064:1:exon

position:9279064:1
position: 9279064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9285109-9285271:1:exon

position:9285109:1
position: 9285109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9285271:1
position: 9285271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9316700-9316826:1:exon

position:9316700:1
position: 9316700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9316826:1
position: 9316826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9325704-9325926:1:exon

position:9325704:1
position: 9325704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9325926:1
position: 9325926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9330067-9330910:1:exon

position:9330067:1
position: 9330067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogenin-1-like
translation: MIKRPELGVTFTKLHCWALTHYSKCVFMDADTLVLCNIDELFQREELSAAPDPGWPDCFNTGVFVYRPSIETYNELLQYSTEKGSFDGGDQGLLNSFYSNWATADINKHLPFIYNLSSVAVYSYLPAFKQYGADAKVAHFLGKIKPWNYSYDPTTRCVIRDSDDYSTIIYPEFLNVWWDTFTTSVLPLLTEYGISKETSSGTQEEDKLSEAVSQLSFTQPDPVESSEERRKKWEQGQVDYMGVDSFQNIQKKLDAYLN
SIO_010081: LOC109924198
subclass of: SO_0000673
so part of: LOC109924198
location: join(9278966..9279064,9285109..9285271,9316700..9316826,9325704..9325926,9330067..9330231)
location: region:9278966-9330231:1
so has part: feature:9278966-9279064:1:exon
so has part: feature:9285109-9285271:1:exon
so has part: feature:9316700-9316826:1:exon
so has part: feature:9325704-9325926:1:exon
so has part: feature:9330067-9330231:1:exon

XP_048460193.1
type: Protein
SIO_000068: ncbiprotein

position:9278966:1
position: 9278966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9330231:1
position: 9330231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9278966-9279064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9285109-9285271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9316700-9316826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9325704-9325926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9330067-9330231:1:exon

hltf
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: hltf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9343435..9422314)
location: region:9343435-9422314:-1
so has part: feature:9343435-9422314:-1:exon
subclass of: SO_0000010

109933931
type: Gene
SIO_000068: ncbigene

position:9343435:-1
position: 9343435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9422314:-1
position: 9422314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9343435-9422314:-1:exon

hltf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hltf
product: helicase-like transcription factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604496.1
SIO_010081: hltf
subclass of: SO_0000673
so part of: hltf
location: complement(join(9343435..9344216,9346818..9346898,9349969..9350149,9359384..9359496,9365374..9365499,9367494..9367672,9373994..9374118,9374893..9375072,9380488..9380623,9383013..9383151,9386177..9386320,9386463..9386560,9390973..9391071,9394384..9394452,9395738..9395888,9402023..9402121,9405881..9406072,9409426..9409500,9413104..9413204,9414876..9415009,9417177..9417343,9420340..9420568,9422170..9422314))
location: region:9343435-9422314:-1
so has part: feature:9422170-9422314:-1:exon
so has part: feature:9420340-9420568:-1:exon
so has part: feature:9417177-9417343:-1:exon
so has part: feature:9414876-9415009:-1:exon
so has part: feature:9413104-9413204:-1:exon
so has part: feature:9409426-9409500:-1:exon
so has part: feature:9405881-9406072:-1:exon
so has part: feature:9402023-9402121:-1:exon
so has part: feature:9395738-9395888:-1:exon
so has part: feature:9394384-9394452:-1:exon
so has part: feature:9390973-9391071:-1:exon
so has part: feature:9386463-9386560:-1:exon
so has part: feature:9386177-9386320:-1:exon
so has part: feature:9383013-9383151:-1:exon
so has part: feature:9380488-9380623:-1:exon
so has part: feature:9374893-9375072:-1:exon
so has part: feature:9373994-9374118:-1:exon
so has part: feature:9367494-9367672:-1:exon
so has part: feature:9365374-9365499:-1:exon
so has part: feature:9359384-9359496:-1:exon
so has part: feature:9349969-9350149:-1:exon
so has part: feature:9346818-9346898:-1:exon
so has part: feature:9343435-9344216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9422170-9422314:-1:exon

position:9422170:-1
position: 9422170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9420340-9420568:-1:exon

position:9420340:-1
position: 9420340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9420568:-1
position: 9420568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9417177-9417343:-1:exon

position:9417177:-1
position: 9417177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9417343:-1
position: 9417343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9414876-9415009:-1:exon

position:9414876:-1
position: 9414876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9415009:-1
position: 9415009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9413104-9413204:-1:exon

position:9413104:-1
position: 9413104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9413204:-1
position: 9413204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9409426-9409500:-1:exon

position:9409426:-1
position: 9409426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9409500:-1
position: 9409500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9405881-9406072:-1:exon

position:9405881:-1
position: 9405881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9406072:-1
position: 9406072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9402023-9402121:-1:exon

position:9402023:-1
position: 9402023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9402121:-1
position: 9402121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9395738-9395888:-1:exon

position:9395738:-1
position: 9395738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9395888:-1
position: 9395888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9394384-9394452:-1:exon

position:9394384:-1
position: 9394384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9394452:-1
position: 9394452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9390973-9391071:-1:exon

position:9390973:-1
position: 9390973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9391071:-1
position: 9391071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9386463-9386560:-1:exon

position:9386463:-1
position: 9386463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9386560:-1
position: 9386560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9386177-9386320:-1:exon

position:9386177:-1
position: 9386177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9386320:-1
position: 9386320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9383013-9383151:-1:exon

position:9383013:-1
position: 9383013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9383151:-1
position: 9383151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9380488-9380623:-1:exon

position:9380488:-1
position: 9380488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9380623:-1
position: 9380623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9374893-9375072:-1:exon

position:9374893:-1
position: 9374893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9375072:-1
position: 9375072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9373994-9374118:-1:exon

position:9373994:-1
position: 9373994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9374118:-1
position: 9374118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9367494-9367672:-1:exon

position:9367494:-1
position: 9367494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9367672:-1
position: 9367672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9365374-9365499:-1:exon

position:9365374:-1
position: 9365374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9365499:-1
position: 9365499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9359384-9359496:-1:exon

position:9359384:-1
position: 9359384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9359496:-1
position: 9359496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9349969-9350149:-1:exon

position:9349969:-1
position: 9349969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9350149:-1
position: 9350149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9346818-9346898:-1:exon

position:9346818:-1
position: 9346818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9346898:-1
position: 9346898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9343435-9344216:-1:exon

position:9344216:-1
position: 9344216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hltf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hltf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor
translation: MLFWRNWTNSRYLGGRTASQFSDGSFLFAPDPEESLSQMINRSLTDDTASPDEDLDSVLFGNLRGNVVGMRYYTGVVNNNEMVALQREPNNPYDRNAVQVNNVNGIQVGHIKRELAAPLAFILDNRLARVEGVVPYGANNVFTMPVQLSFWGREENRDAVLERLKRHGFKLAPPTKGGGIAEAWSGMRSARPGPSYKAPVHTAVQMTVEQLKNEFDKLFEDLKEHDKTREMEPAEAVCTPLLPHQKQALSWMVLRENNADLPPFWEQRNDMYYNLLTNFAEKERPENVRGGILADDMGLGKTLSTIAVILTNFHQGQPLPTEKFTRGPVVEEFLNSFFSAFIFYIRFINWNAVLCRKKTENVKYTYSSDSEKDEECISTKKKVKTQQKSATAKRTEWRPTSSGRKDSKSQSGCGLMEDIDFAAALGGGSSSTLKKIKKGCPSTQTSTITAANIKARSTLIVCPLSVLSNWIDQFERHLCPDVKLNMYLYYGSERNKSASFLAEQDIVLTTYNTLTVDYGSGSASPLHKVNWLRVVLDEGHTIRNPNAQQTKAALTLTAERRWVLTGTPIQNSLKDLWSILSFLKLKPFTDRQWWHRTIQRPVTMGDQHGLRRLQALIKNITLRRTKTSKVNGKPVIELPERTVFVQHITLSDEEKQIYESVKNEGRAIIGRYFSEGSIFTHYADVLAILVWLRQLCCHPRLFANSSAVMGSSDNATPDELREKLLNKMKLVLSCGSDEECAICLESLTFPVITHCAHVYCRPCICQVIQSEQPTARCPLCRAEIRVEQLVECPPEETDVTAPDKSQQVWVSSSKVDALMHSLIELRKQDPTVKSLVVSQFTAFLTLIETPLRQEGFAFTRLDGSMPQKRRINAIESFQSSEPGSPTIMLLSLKAGGVGLNLTAASRVFLMDPAWNPAAEDQCFDRCHRLGQTRDVIITKFIVKNSVEENMIKIQNKKRELAAGAFGTKRQREIKQSRIEEIKILIDV
SIO_010081: hltf
subclass of: SO_0000673
so part of: hltf
location: complement(join(9344070..9344216,9346818..9346898,9349969..9350149,9359384..9359496,9365374..9365499,9367494..9367672,9373994..9374118,9374893..9375072,9380488..9380623,9383013..9383151,9386177..9386320,9386463..9386560,9390973..9391071,9394384..9394452,9395738..9395888,9402023..9402121,9405881..9406072,9409426..9409500,9413104..9413204,9414876..9415009,9417177..9417343,9420340..9420567))
location: region:9344070-9420567:-1
so has part: feature:9420340-9420567:-1:exon
so has part: feature:9417177-9417343:-1:exon
so has part: feature:9414876-9415009:-1:exon
so has part: feature:9413104-9413204:-1:exon
so has part: feature:9409426-9409500:-1:exon
so has part: feature:9405881-9406072:-1:exon
so has part: feature:9402023-9402121:-1:exon
so has part: feature:9395738-9395888:-1:exon
so has part: feature:9394384-9394452:-1:exon
so has part: feature:9390973-9391071:-1:exon
so has part: feature:9386463-9386560:-1:exon
so has part: feature:9386177-9386320:-1:exon
so has part: feature:9383013-9383151:-1:exon
so has part: feature:9380488-9380623:-1:exon
so has part: feature:9374893-9375072:-1:exon
so has part: feature:9373994-9374118:-1:exon
so has part: feature:9367494-9367672:-1:exon
so has part: feature:9365374-9365499:-1:exon
so has part: feature:9359384-9359496:-1:exon
so has part: feature:9349969-9350149:-1:exon
so has part: feature:9346818-9346898:-1:exon
so has part: feature:9344070-9344216:-1:exon

XP_048460453.1
type: Protein
SIO_000068: ncbiprotein

position:9344070:-1
position: 9344070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9420567:-1
position: 9420567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9420340-9420567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9417177-9417343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9414876-9415009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9413104-9413204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9409426-9409500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9405881-9406072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9402023-9402121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9395738-9395888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9394384-9394452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9390973-9391071:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9386463-9386560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9386177-9386320:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9383013-9383151:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9380488-9380623:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9374893-9375072:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9373994-9374118:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9367494-9367672:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9365374-9365499:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9359384-9359496:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9349969-9350149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9346818-9346898:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9344070-9344216:-1:exon

tmem145
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: tmem145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9427613..9476462)
location: region:9427613-9476462:-1
so has part: feature:9427613-9476462:-1:exon
subclass of: SO_0000010

125484693
type: Gene
SIO_000068: ncbigene

position:9427613:-1
position: 9427613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9476462:-1
position: 9476462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9427613-9476462:-1:exon

tmem145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: tmem145
product: transmembrane protein 145, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048604441.1
SIO_010081: tmem145
subclass of: SO_0000673
so part of: tmem145
location: complement(join(9427613..9427792,9431148..9431366,9442654..9442747,9445644..9445722,9446421..9446501,9451679..9451747,9456601..9456702,9459376..9459515,9462890..9462976,9464495..9464572,9466061..9466193,9469614..9469688,9476247..9476462))
location: region:9427613-9476462:-1
so has part: feature:9476247-9476462:-1:exon
so has part: feature:9469614-9469688:-1:exon
so has part: feature:9466061-9466193:-1:exon
so has part: feature:9464495-9464572:-1:exon
so has part: feature:9462890-9462976:-1:exon
so has part: feature:9459376-9459515:-1:exon
so has part: feature:9456601-9456702:-1:exon
so has part: feature:9451679-9451747:-1:exon
so has part: feature:9446421-9446501:-1:exon
so has part: feature:9445644-9445722:-1:exon
so has part: feature:9442654-9442747:-1:exon
so has part: feature:9431148-9431366:-1:exon
so has part: feature:9427613-9427792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9476247-9476462:-1:exon

position:9476247:-1
position: 9476247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9469614-9469688:-1:exon

position:9469614:-1
position: 9469614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9469688:-1
position: 9469688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9466061-9466193:-1:exon

position:9466061:-1
position: 9466061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9466193:-1
position: 9466193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9464495-9464572:-1:exon

position:9464495:-1
position: 9464495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9464572:-1
position: 9464572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9462890-9462976:-1:exon

position:9462890:-1
position: 9462890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9462976:-1
position: 9462976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9459376-9459515:-1:exon

position:9459376:-1
position: 9459376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9459515:-1
position: 9459515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9456601-9456702:-1:exon

position:9456601:-1
position: 9456601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9456702:-1
position: 9456702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9451679-9451747:-1:exon

position:9451679:-1
position: 9451679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9451747:-1
position: 9451747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9446421-9446501:-1:exon

position:9446421:-1
position: 9446421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9446501:-1
position: 9446501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9445644-9445722:-1:exon

position:9445644:-1
position: 9445644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9445722:-1
position: 9445722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9442654-9442747:-1:exon

position:9442654:-1
position: 9442654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9442747:-1
position: 9442747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9431148-9431366:-1:exon

position:9431148:-1
position: 9431148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9431366:-1
position: 9431366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9427613-9427792:-1:exon

position:9427792:-1
position: 9427792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmem145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: tmem145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein tmem145
translation: MLMASVGSEVLGHFFLSIHLGIYALNGVGCESVKIIGRLLLVISYLLLVPMLLLISHGFTITRSRIHHSSAVSVCLLVITFALMYSWFFINEKHFLTRPFQTNLRFPYHIDTSRIALMRYASESQENLEKLGHHVYRNISVTSFINDSSAAPNVPNSSGANIWGLQEDTDFTRGLLERTKSPIDSRFGFIKKLEVQGYKCYN
SIO_010081: tmem145
subclass of: SO_0000673
so part of: tmem145
location: complement(join(9427685..9427792,9431148..9431366,9442654..9442747,9445644..9445722,9446421..9446501,9451679..9451706))
location: region:9427685-9451706:-1
so has part: feature:9451679-9451706:-1:exon
so has part: feature:9446421-9446501:-1:exon
so has part: feature:9445644-9445722:-1:exon
so has part: feature:9442654-9442747:-1:exon
so has part: feature:9431148-9431366:-1:exon
so has part: feature:9427685-9427792:-1:exon

XP_048460398.1
type: Protein
SIO_000068: ncbiprotein

position:9427685:-1
position: 9427685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9451706:-1
position: 9451706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9451679-9451706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9446421-9446501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9445644-9445722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9442654-9442747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9431148-9431366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9427685-9427792:-1:exon

tmem145
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: tmem145
product: transmembrane protein 145, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007263528.1
SIO_010081: tmem145
so part of: tmem145
location: complement(join(9454128..9454185,9456601..9456702,9459376..9459515,9462890..9462976,9464495..9464572,9469614..9469688,9476247..9476462))
location: region:9454128-9476462:-1
so has part: feature:9476247-9476462:-1:exon
so has part: feature:9469614-9469688:-1:exon
so has part: feature:9464495-9464572:-1:exon
so has part: feature:9462890-9462976:-1:exon
so has part: feature:9459376-9459515:-1:exon
so has part: feature:9456601-9456702:-1:exon
so has part: feature:9454128-9454185:-1:exon

position:9454128:-1
position: 9454128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9476247-9476462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9469614-9469688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9464495-9464572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9462890-9462976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9459376-9459515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9456601-9456702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9454128-9454185:-1:exon

position:9454185:-1
position: 9454185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmem145
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: tmem145
product: transmembrane protein 145, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007263527.1
SIO_010081: tmem145
so part of: tmem145
location: complement(join(9458228..9459264,9459376..9459515,9462890..9462976,9464495..9464572,9469614..9469688,9476247..9476462))
location: region:9458228-9476462:-1
so has part: feature:9476247-9476462:-1:exon
so has part: feature:9469614-9469688:-1:exon
so has part: feature:9464495-9464572:-1:exon
so has part: feature:9462890-9462976:-1:exon
so has part: feature:9459376-9459515:-1:exon
so has part: feature:9458228-9459264:-1:exon

position:9458228:-1
position: 9458228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9476247-9476462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9469614-9469688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9464495-9464572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9462890-9462976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9459376-9459515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9458228-9459264:-1:exon

position:9459264:-1
position: 9459264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hps3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: hps3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9477883..9533035
location: region:9477883-9533035:1
so has part: feature:9477883-9533035:1:exon
subclass of: SO_0000010

109924540
type: Gene
SIO_000068: ncbigene

position:9477883:1
position: 9477883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9533035:1
position: 9533035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9477883-9533035:1:exon

hps3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hps3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048604498.1
SIO_010081: hps3
subclass of: SO_0000673
so part of: hps3
location: join(9477883..9478914,9479024..9479305,9479428..9479946,9485512..9485680,9490578..9490663,9493594..9493786,9496182..9496203,9520205..9520309,9526109..9526315,9530769..9530859,9531868..9533035)
location: region:9477883-9533035:1
so has part: feature:9477883-9478914:1:exon
so has part: feature:9479024-9479305:1:exon
so has part: feature:9479428-9479946:1:exon
so has part: feature:9485512-9485680:1:exon
so has part: feature:9490578-9490663:1:exon
so has part: feature:9493594-9493786:1:exon
so has part: feature:9496182-9496203:1:exon
so has part: feature:9520205-9520309:1:exon
so has part: feature:9526109-9526315:1:exon
so has part: feature:9530769-9530859:1:exon
so has part: feature:9531868-9533035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9477883-9478914:1:exon

position:9478914:1
position: 9478914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9479024-9479305:1:exon

position:9479024:1
position: 9479024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9479305:1
position: 9479305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9479428-9479946:1:exon

position:9479428:1
position: 9479428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9479946:1
position: 9479946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9485512-9485680:1:exon

position:9485512:1
position: 9485512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9485680:1
position: 9485680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9490578-9490663:1:exon

position:9490578:1
position: 9490578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9490663:1
position: 9490663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9493594-9493786:1:exon

position:9493594:1
position: 9493594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9493786:1
position: 9493786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9496182-9496203:1:exon