Rhincodon typus isolate 14 chromosome 11, sRhiTyp1.1, whole genome shotgun sequence.
type: Entry
definition: Rhincodon typus isolate 14 chromosome 11, sRhiTyp1.1, whole genome shotgun sequence.
sequence version: NC_063342.1
sequence date: 2022-06-09
sequence: sequence
division: CON
label: NC_063342.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA842712
dblink: SAMN19519256
keyword: WGS
keyword: RefSeq
source: Rhincodon typus (whale shark)
organism: Rhincodon typus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038808.1.\nAssembly name: sRhiTyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/03. The\noriginal whole-genome shotgun project has the accession\nJAHMAH000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Supernova v. 2.1.1; P_RNA_scaffolder v.\n commit 7941e0f; Tigmint v. 1.1.2; ARKS v.\n 1.1.0; 3D-DNA v. 180922\nAssembly Name :: sRhiTyp1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 46.7x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhincodon typus Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 76122505
topology: linear
so has quality: SO_0000987
location: 1..76122505
location: region:1-76122505:1
RO_0002162: 259920

NC_063342
type: RefSeq
SIO_000068: refseq

PRJNA842712
type: BioProject
SIO_000068: bioproject

SAMN19519256
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76122505:1
position: 76122505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-76122505:1:source
so part of: sequence
organism: Rhincodon typus
mol type: genomic DNA
isolate: 14
chromosome: 11
sex: male
tissue type: blood
dev stage: adult
collected by: 2018-05-24

259920
type: Taxonomy
SIO_000068: taxonomy

LOC125484401
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484401
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <3148..11825
location: region:3148-11825:1
so has part: feature:3148-11825:1:exon
subclass of: SO_0000010

125484401
type: Gene
SIO_000068: ncbigene

position:3148:1
position: 3148
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:11825:1
position: 11825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3148-11825:1:exon

LOC125484401
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484401
product: beta-secretase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_048603004.1
SIO_010081: LOC125484401
subclass of: SO_0000673
so part of: LOC125484401
location: join(<3148..3364,3532..3669,8376..8510,11697..11825)
location: region:3148-11825:1
so has part: feature:3148-3364:1:exon
so has part: feature:3532-3669:1:exon
so has part: feature:8376-8510:1:exon
so has part: feature:11697-11825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3148-3364:1:exon

position:3364:1
position: 3364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3532-3669:1:exon

position:3532:1
position: 3532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3669:1
position: 3669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8376-8510:1:exon

position:8376:1
position: 8376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8510:1
position: 8510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11697-11825:1:exon

position:11697:1
position: 11697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484401
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484401
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 2
product: beta-secretase 2-like
translation: SSTYMSRDLFVSVRYTQGSWEGELGIDVITIPKGPNGTITTNIATILQSEDFFLPGINWQGILGLAYSTLAKPSSSVEPFFDSLVKQIRIPNVFSLQMCGAGLSLIGEEQASPAGGSLVMGGIEASLYKGDIWYTPIKREWYYQIEVLKLEVGGQNLNLDCTEYNSDKAIVDSGTTLLRLPINVFDAVVAAIKQTSKVRDLLLEL
SIO_010081: LOC125484401
subclass of: SO_0000673
so part of: LOC125484401
location: join(<3148..3364,3532..3669,8376..8510,11697..11825)
location: region:3148-11825:1
so has part: feature:3148-3364:1:exon
so has part: feature:3532-3669:1:exon
so has part: feature:8376-8510:1:exon
so has part: feature:11697-11825:1:exon

XP_048458961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3148-3364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3532-3669:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8376-8510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11697-11825:1:exon

LOC109921744
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109921744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(35868..117348)
location: region:35868-117348:-1
so has part: feature:35868-117348:-1:exon
subclass of: SO_0000010

109921744
type: Gene
SIO_000068: ncbigene

position:35868:-1
position: 35868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117348:-1
position: 117348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35868-117348:-1:exon

LOC109921744
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109921744
product: cytochrome P450 2J2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048603005.1
SIO_010081: LOC109921744
subclass of: SO_0000673
so part of: LOC109921744
location: complement(join(35868..36049,42712..42853,47849..48036,57159..57300,66643..66819,88876..89036,100004..100144,100232..100394,112673..112763,117308..117348))
location: region:35868-117348:-1
so has part: feature:117308-117348:-1:exon
so has part: feature:112673-112763:-1:exon
so has part: feature:100232-100394:-1:exon
so has part: feature:100004-100144:-1:exon
so has part: feature:88876-89036:-1:exon
so has part: feature:66643-66819:-1:exon
so has part: feature:57159-57300:-1:exon
so has part: feature:47849-48036:-1:exon
so has part: feature:42712-42853:-1:exon
so has part: feature:35868-36049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117308-117348:-1:exon

position:117308:-1
position: 117308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:112673-112763:-1:exon

position:112673:-1
position: 112673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112763:-1
position: 112763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100232-100394:-1:exon

position:100232:-1
position: 100232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100394:-1
position: 100394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100004-100144:-1:exon

position:100004:-1
position: 100004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100144:-1
position: 100144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88876-89036:-1:exon

position:88876:-1
position: 88876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89036:-1
position: 89036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:66643-66819:-1:exon

position:66643:-1
position: 66643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66819:-1
position: 66819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57159-57300:-1:exon

position:57159:-1
position: 57159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57300:-1
position: 57300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:47849-48036:-1:exon

position:47849:-1
position: 47849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48036:-1
position: 48036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:42712-42853:-1:exon

position:42712:-1
position: 42712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42853:-1
position: 42853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:35868-36049:-1:exon

position:36049:-1
position: 36049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109921744
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109921744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 2J2-like
translation: MASCQWLQKLFQHRCVDEDNVIYIVYSDFSKVFDKIQHGKVIPKLGKKYGNIFSMNLGAEFLLVLDGYSIVREALVHHGEVFSARPISPLFLQLKGSHGIIFSNGNEWRDQRHFAVSHLRNLLPQVKPWLISEARRLNERFAEHHGQPFDPSLDISWSVYSAMYQVLFGHHLDHSEPTFREFLQHSMNIMAILPSLSVKLYNLLPMVMQFMPGAHQRLFAEWHQLVEILLQQVNHHQMSRNPETPRDFTDCYLNKMEKVSGDENSTFTLENLVACTTDLIIGGTETIVSVLRWLLLYMTVYPSIQEKVHHEIDIMIGQHKEPSWVDRVKLPYTNAVIHECLRVGNVIPLNIPRQTTKDLQLRGYRIPKGTTVIPSLTGVLFDGKRWKSPNSFNPNRYLDENGQFHQVDAHLPFSTGHRMCIGVNLAQMETFLFFTFLMQRFQFTAAAGGYPFNLAGVYGATLAPHPYHICACLRK
SIO_010081: LOC109921744
subclass of: SO_0000673
so part of: LOC109921744
location: complement(join(35868..36049,42712..42853,47849..48036,57159..57300,66643..66819,88876..89036,100004..100144,100232..100394,112673..112763,117308..117348))
location: region:35868-117348:-1
so has part: feature:117308-117348:-1:exon
so has part: feature:112673-112763:-1:exon
so has part: feature:100232-100394:-1:exon
so has part: feature:100004-100144:-1:exon
so has part: feature:88876-89036:-1:exon
so has part: feature:66643-66819:-1:exon
so has part: feature:57159-57300:-1:exon
so has part: feature:47849-48036:-1:exon
so has part: feature:42712-42853:-1:exon
so has part: feature:35868-36049:-1:exon

XP_048458962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117308-117348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112673-112763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100232-100394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100004-100144:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88876-89036:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66643-66819:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57159-57300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47849-48036:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42712-42853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:35868-36049:-1:exon

LOC109928214
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109928214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 117427..255794
location: region:117427-255794:1
so has part: feature:117427-255794:1:exon
subclass of: SO_0000010

109928214
type: Gene
SIO_000068: ncbigene

position:117427:1
position: 117427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255794:1
position: 255794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117427-255794:1:exon

LOC109928214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109928214
product: ubiquitin-associated and SH3 domain-containing protein A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048603146.1
SIO_010081: LOC109928214
subclass of: SO_0000673
so part of: LOC109928214
location: join(117427..117531,127498..127551,141698..141884,150634..150832,160335..160504,164607..164815,178847..178985,194781..194889,199040..199162,206092..206184,220652..220796,233064..233167,234016..234125,255323..255794)
location: region:117427-255794:1
so has part: feature:117427-117531:1:exon
so has part: feature:127498-127551:1:exon
so has part: feature:141698-141884:1:exon
so has part: feature:150634-150832:1:exon
so has part: feature:160335-160504:1:exon
so has part: feature:164607-164815:1:exon
so has part: feature:178847-178985:1:exon
so has part: feature:194781-194889:1:exon
so has part: feature:199040-199162:1:exon
so has part: feature:206092-206184:1:exon
so has part: feature:220652-220796:1:exon
so has part: feature:233064-233167:1:exon
so has part: feature:234016-234125:1:exon
so has part: feature:255323-255794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117427-117531:1:exon

position:117531:1
position: 117531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127498-127551:1:exon

position:127498:1
position: 127498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127551:1
position: 127551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141698-141884:1:exon

position:141698:1
position: 141698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141884:1
position: 141884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150634-150832:1:exon

position:150634:1
position: 150634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150832:1
position: 150832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160335-160504:1:exon

position:160335:1
position: 160335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160504:1
position: 160504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:164607-164815:1:exon

position:164607:1
position: 164607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164815:1
position: 164815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:178847-178985:1:exon

position:178847:1
position: 178847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178985:1
position: 178985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:194781-194889:1:exon

position:194781:1
position: 194781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194889:1
position: 194889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199040-199162:1:exon

position:199040:1
position: 199040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199162:1
position: 199162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:206092-206184:1:exon

position:206092:1
position: 206092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206184:1
position: 206184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:220652-220796:1:exon

position:220652:1
position: 220652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220796:1
position: 220796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:233064-233167:1:exon

position:233064:1
position: 233064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233167:1
position: 233167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:234016-234125:1:exon

position:234016:1
position: 234016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234125:1
position: 234125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:255323-255794:1:exon

position:255323:1
position: 255323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109928214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109928214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated and SH3 domain-containing protein A
translation: MGYPEHIAQKALAATGGRSAQEAADWIFAHRSDPTLDDLIPQEYVLYLCPSGPLWDKLMAFWSKSQQHCGRNPAHEVFPHVTLCHFFTCEDRKVQNLYEALKKAGDKFADRFPSYLSLSLHSTPSYIGYFFDEASADIIKQFALAFAGEARALADCQIDLYNKQLHLTLAHKFQVQQQWKLEELAQSIKLGVSCHWAAAIYSRDMRFVHYQVSRALYPYVPQNEDELKLSFSDYIFLDPTNQQDVSEGWVRGISHRTGRTGLLPENYTERGYESDTWVRHRTYAFCQTLVRASTNINEHNTSSSQNGKIASSQPQATNSIHKLLKSQLIEAATLRRCVLTMRHAERVDLVFGKSWLAQCITTEGRYIRPDLNFPHSIPRRAGGTKDYEHDAPLSSCGIFQSRLIGEAVREQELMIQCVYSSPALRCVQTAHYVLEALHLDPEVNIRVEPGLFEWTKWEGDRTIPNFMSVTELKSAGYTVDVNYSVHVPLCKLVPSETYEDYINRCSSVMKAIIDKRDEAGNILLVAHASTLDCCTRPLLGLPPKDSKEFVQMVRKVPALGLCCCEEVKETKKWQMIEPPIRTLTHGPNAAFSWKDTIQI
SIO_010081: LOC109928214
subclass of: SO_0000673
so part of: LOC109928214
location: join(117509..117531,127498..127551,141698..141884,150634..150832,160335..160504,164607..164815,178847..178985,194781..194889,199040..199162,206092..206184,220652..220796,233064..233167,234016..234125,255323..255457)
location: region:117509-255457:1
so has part: feature:117509-117531:1:exon
so has part: feature:127498-127551:1:exon
so has part: feature:141698-141884:1:exon
so has part: feature:150634-150832:1:exon
so has part: feature:160335-160504:1:exon
so has part: feature:164607-164815:1:exon
so has part: feature:178847-178985:1:exon
so has part: feature:194781-194889:1:exon
so has part: feature:199040-199162:1:exon
so has part: feature:206092-206184:1:exon
so has part: feature:220652-220796:1:exon
so has part: feature:233064-233167:1:exon
so has part: feature:234016-234125:1:exon
so has part: feature:255323-255457:1:exon

XP_048459103.1
type: Protein
SIO_000068: ncbiprotein

position:117509:1
position: 117509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255457:1
position: 255457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117509-117531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127498-127551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141698-141884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150634-150832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160335-160504:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164607-164815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:178847-178985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194781-194889:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199040-199162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206092-206184:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:220652-220796:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:233064-233167:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234016-234125:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255323-255457:1:exon

LOC109935986
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109935986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 266542..404715
location: region:266542-404715:1
so has part: feature:266542-404715:1:exon
subclass of: SO_0000010

109935986
type: Gene
SIO_000068: ncbigene

position:266542:1
position: 266542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404715:1
position: 404715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266542-404715:1:exon

LOC109935986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109935986
product: heat shock transcription factor 2 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048603302.1
SIO_010081: LOC109935986
subclass of: SO_0000673
so part of: LOC109935986
location: join(266542..266605,292822..292972,311187..311290,320393..320542,328833..328974,383847..383964,399859..399962,404513..404715)
location: region:266542-404715:1
so has part: feature:266542-266605:1:exon
so has part: feature:292822-292972:1:exon
so has part: feature:311187-311290:1:exon
so has part: feature:320393-320542:1:exon
so has part: feature:328833-328974:1:exon
so has part: feature:383847-383964:1:exon
so has part: feature:399859-399962:1:exon
so has part: feature:404513-404715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266542-266605:1:exon

position:266605:1
position: 266605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292822-292972:1:exon

position:292822:1
position: 292822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292972:1
position: 292972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311187-311290:1:exon

position:311187:1
position: 311187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311290:1
position: 311290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:320393-320542:1:exon

position:320393:1
position: 320393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320542:1
position: 320542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:328833-328974:1:exon

position:328833:1
position: 328833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328974:1
position: 328974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:383847-383964:1:exon

position:383847:1
position: 383847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383964:1
position: 383964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:399859-399962:1:exon

position:399859:1
position: 399859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399962:1
position: 399962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:404513-404715:1:exon

position:404513:1
position: 404513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109935986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109935986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor 2-binding protein
translation: MRRSAGARRNSKTVSKDEFVKIRKRDLERLTTETMQIKDFLPKILNGEFLESFYQLEVAEAALEKKEQENEQLRLDCDHFKAKLQTAQADCQKEREEKLASRIQLNEARQQLLQQAEYCTEMGAAVCTLLWSVSSNEESVKFILGGSKAEKFFNIVGQTIESFVKSLDGSIKEQQNLDSDENQFVLALAGIVTNVAAVACGREFLVNSSQILLETLLQLLAEMKTGLCTKLKVLMLMCLYNVSINLKGLQYISESPGFIPLLSWLLEDPDAEVCLHVLRLIQSLILEPEVFSRVATQIRETLSEQRILQLTNNRNPDLRNIASELLEDMKMLNM
SIO_010081: LOC109935986
subclass of: SO_0000673
so part of: LOC109935986
location: join(266573..266605,292822..292972,311187..311290,320393..320542,328833..328974,383847..383964,399859..399962,404513..404715)
location: region:266573-404715:1
so has part: feature:266573-266605:1:exon
so has part: feature:292822-292972:1:exon
so has part: feature:311187-311290:1:exon
so has part: feature:320393-320542:1:exon
so has part: feature:328833-328974:1:exon
so has part: feature:383847-383964:1:exon
so has part: feature:399859-399962:1:exon
so has part: feature:404513-404715:1:exon

XP_048459259.1
type: Protein
SIO_000068: ncbiprotein

position:266573:1
position: 266573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266573-266605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292822-292972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311187-311290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320393-320542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328833-328974:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:383847-383964:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399859-399962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404513-404715:1:exon

pknox1.1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pknox1.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 449992..580850
location: region:449992-580850:1
so has part: feature:449992-580850:1:exon
subclass of: SO_0000010

109923858
type: Gene
SIO_000068: ncbigene

position:449992:1
position: 449992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580850:1
position: 580850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449992-580850:1:exon

pknox1.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pknox1.1
product: pbx/knotted 1 homeobox 1.1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603006.1
SIO_010081: pknox1.1
subclass of: SO_0000673
so part of: pknox1.1
location: join(449992..450184,451152..451176,461612..461714,483319..483452,492249..492420,517152..517322,526482..526614,531745..531839,567796..567872,573215..573390,579302..580850)
location: region:449992-580850:1
so has part: feature:449992-450184:1:exon
so has part: feature:451152-451176:1:exon
so has part: feature:461612-461714:1:exon
so has part: feature:483319-483452:1:exon
so has part: feature:492249-492420:1:exon
so has part: feature:517152-517322:1:exon
so has part: feature:526482-526614:1:exon
so has part: feature:531745-531839:1:exon
so has part: feature:567796-567872:1:exon
so has part: feature:573215-573390:1:exon
so has part: feature:579302-580850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449992-450184:1:exon

position:450184:1
position: 450184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451152-451176:1:exon

position:451152:1
position: 451152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451176:1
position: 451176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:461612-461714:1:exon

position:461612:1
position: 461612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461714:1
position: 461714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:483319-483452:1:exon

position:483319:1
position: 483319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483452:1
position: 483452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:492249-492420:1:exon

position:492249:1
position: 492249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492420:1
position: 492420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:517152-517322:1:exon

position:517152:1
position: 517152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517322:1
position: 517322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:526482-526614:1:exon

position:526482:1
position: 526482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526614:1
position: 526614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:531745-531839:1:exon

position:531745:1
position: 531745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531839:1
position: 531839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:567796-567872:1:exon

position:567796:1
position: 567796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567872:1
position: 567872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:573215-573390:1:exon

position:573215:1
position: 573215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573390:1
position: 573390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:579302-580850:1:exon

position:579302:1
position: 579302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pknox1.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pknox1.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX1.1
translation: MLQQPRTPENGRRTPTQSIYRQQIPKKFHLQNKRQSEDTVQKKTLASLPYITNISGMTTRLLRPLEGIWPNLRVTRFLPHDANILPTSLETMMATQPITLDSYPEQPMPVIPPMSSNAEAGPSCTKSDPDASSPVPAECQTSMEADKGAIYRHPLFPLLALLFEKCEQSTQGSECITSASFDVDIENFVRKQEKEGKPFFSEDPEIDNLMVKAIQVLRIHLLELEKVNDLCKDFCNRYIACLKTKMNSENLLSSDPGGPYASVQTQLPVQNTTITTLPGTISPQGIVVPASALQQGNVTVTTVNPTQVVTGGGAVYQPVTVVTPQGQVVTQTHGTIRIQNAQHPYPTEDEKRQIAGQTNLTLLQVNNWFINARRRILQPMLDASNPDTPPKAKKIKTQSRPVQRFWPDSIAAGVAQQHVTSITVSDSAMVSISSPVNVNVDSLQSLSSDGATLAVQQVMMAGQSGEDSGNSVEEDDSDLSATNISGLALDNSDSLQ
SIO_010081: pknox1.1
subclass of: SO_0000673
so part of: pknox1.1
location: join(449992..450184,451152..451176,461612..461714,483319..483452,492249..492420,517152..517322,526482..526614,531745..531839,567796..567872,573215..573390,579302..579513)
location: region:449992-579513:1
so has part: feature:449992-450184:1:exon
so has part: feature:451152-451176:1:exon
so has part: feature:461612-461714:1:exon
so has part: feature:483319-483452:1:exon
so has part: feature:492249-492420:1:exon
so has part: feature:517152-517322:1:exon
so has part: feature:526482-526614:1:exon
so has part: feature:531745-531839:1:exon
so has part: feature:567796-567872:1:exon
so has part: feature:573215-573390:1:exon
so has part: feature:579302-579513:1:exon

XP_048458963.1
type: Protein
SIO_000068: ncbiprotein

position:579513:1
position: 579513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449992-450184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451152-451176:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461612-461714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483319-483452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492249-492420:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517152-517322:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526482-526614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:531745-531839:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:567796-567872:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:573215-573390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:579302-579513:1:exon

cbsa
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cbsa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(601644..625484)
location: region:601644-625484:-1
so has part: feature:601644-625484:-1:exon
subclass of: SO_0000010

109925172
type: Gene
SIO_000068: ncbigene

position:601644:-1
position: 601644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625484:-1
position: 625484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601644-625484:-1:exon

cbsa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cbsa
product: cystathionine beta-synthase a, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602610.1
SIO_010081: cbsa
subclass of: SO_0000673
so part of: cbsa
location: complement(join(601644..602221,603998..604082,606686..606794,610852..610986,611292..611369,611579..611684,611903..611987,612162..612287,615002..615093,615404..615473,616493..616627,617360..617439,617523..617657,623692..623798,624554..624717,625377..625484))
location: region:601644-625484:-1
so has part: feature:625377-625484:-1:exon
so has part: feature:624554-624717:-1:exon
so has part: feature:623692-623798:-1:exon
so has part: feature:617523-617657:-1:exon
so has part: feature:617360-617439:-1:exon
so has part: feature:616493-616627:-1:exon
so has part: feature:615404-615473:-1:exon
so has part: feature:615002-615093:-1:exon
so has part: feature:612162-612287:-1:exon
so has part: feature:611903-611987:-1:exon
so has part: feature:611579-611684:-1:exon
so has part: feature:611292-611369:-1:exon
so has part: feature:610852-610986:-1:exon
so has part: feature:606686-606794:-1:exon
so has part: feature:603998-604082:-1:exon
so has part: feature:601644-602221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625377-625484:-1:exon

position:625377:-1
position: 625377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624554-624717:-1:exon

position:624554:-1
position: 624554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624717:-1
position: 624717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:623692-623798:-1:exon

position:623692:-1
position: 623692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623798:-1
position: 623798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617523-617657:-1:exon

position:617523:-1
position: 617523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617657:-1
position: 617657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:617360-617439:-1:exon

position:617360:-1
position: 617360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617439:-1
position: 617439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:616493-616627:-1:exon

position:616493:-1
position: 616493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616627:-1
position: 616627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:615404-615473:-1:exon

position:615404:-1
position: 615404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615473:-1
position: 615473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:615002-615093:-1:exon

position:615002:-1
position: 615002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615093:-1
position: 615093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:612162-612287:-1:exon

position:612162:-1
position: 612162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612287:-1
position: 612287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:611903-611987:-1:exon

position:611903:-1
position: 611903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611987:-1
position: 611987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:611579-611684:-1:exon

position:611579:-1
position: 611579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611684:-1
position: 611684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:611292-611369:-1:exon

position:611292:-1
position: 611292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611369:-1
position: 611369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:610852-610986:-1:exon

position:610852:-1
position: 610852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610986:-1
position: 610986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:606686-606794:-1:exon

position:606686:-1
position: 606686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606794:-1
position: 606794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:603998-604082:-1:exon

position:603998:-1
position: 603998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604082:-1
position: 604082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:601644-602221:-1:exon

position:602221:-1
position: 602221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cbsa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cbsa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystathionine beta-synthase a
translation: MMESEGRQMNGFLQEVPNGIDGHERKWIRPDLPSKCTWHLGIAQTQSPHNHQSLPSTPDILPNILSKIGNTPMVRLNKVTRAHGLKCELLAKCEYFNAGGSVKDRIALRMVEEAEKAGDLKPGDTIIEPTSGNTGIGLALAAAVKGYRCIIVLPEKMSTEKVDVLRALGAEIVRTPTSASFDSPESHVGVAWRLKNEIPNSCILDQYRNPGNPLVHYDQTAEEILRQCEGKVDMLVAGAGTGGTITGIARKLKEKCPGCQIIGVDPEGSILAEPEHLNQSDVSTYEVEGIGYDFIPTVLDRSVVDKWYKSNDKDSFQIARELIREEGLLCGGSSGSAVSVALEAARELGEGQRCVVILPDSIRNYMTKFLSDEWMTLKGFQVSRPTYCKKHWWWTCRVEQLNVLPSLTLLPSSSCQRAIEVLREKGYDQAPVVNDGGTLLGVVSLKQMLSSIMAAKVRLTDPVTQVLCKQFGKVKRSDDLGKLSTILETDSFALIMNEQDRYRVDGIHGKKMTVLGVVTAIDLLSFISQKEIVLK
SIO_010081: cbsa
subclass of: SO_0000673
so part of: cbsa
location: complement(join(602118..602221,603998..604082,606686..606794,610852..610986,611292..611369,611579..611684,611903..611987,612162..612287,615002..615093,615404..615473,616493..616627,617360..617439,617523..617657,623692..623798,624554..624714))
location: region:602118-624714:-1
so has part: feature:624554-624714:-1:exon
so has part: feature:623692-623798:-1:exon
so has part: feature:617523-617657:-1:exon
so has part: feature:617360-617439:-1:exon
so has part: feature:616493-616627:-1:exon
so has part: feature:615404-615473:-1:exon
so has part: feature:615002-615093:-1:exon
so has part: feature:612162-612287:-1:exon
so has part: feature:611903-611987:-1:exon
so has part: feature:611579-611684:-1:exon
so has part: feature:611292-611369:-1:exon
so has part: feature:610852-610986:-1:exon
so has part: feature:606686-606794:-1:exon
so has part: feature:603998-604082:-1:exon
so has part: feature:602118-602221:-1:exon

XP_048458567.1
type: Protein
SIO_000068: ncbiprotein

position:602118:-1
position: 602118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624714:-1
position: 624714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624554-624714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623692-623798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617523-617657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617360-617439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616493-616627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615404-615473:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615002-615093:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:612162-612287:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611903-611987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611579-611684:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:611292-611369:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610852-610986:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606686-606794:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:603998-604082:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:602118-602221:-1:exon

cbsa
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: cbsa
product: cystathionine beta-synthase a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_007263165.1
SIO_010081: cbsa
so part of: cbsa
location: complement(join(602206..602221,603998..604082,605693..605753,606686..606794,610852..610986,611292..611369,611579..611684,611903..611987,612162..612287,615002..615093,615404..615473,616493..616627,617360..617439,617523..617657,623692..623798,624554..624717,625377..625484))
location: region:602206-625484:-1
so has part: feature:625377-625484:-1:exon
so has part: feature:624554-624717:-1:exon
so has part: feature:623692-623798:-1:exon
so has part: feature:617523-617657:-1:exon
so has part: feature:617360-617439:-1:exon
so has part: feature:616493-616627:-1:exon
so has part: feature:615404-615473:-1:exon
so has part: feature:615002-615093:-1:exon
so has part: feature:612162-612287:-1:exon
so has part: feature:611903-611987:-1:exon
so has part: feature:611579-611684:-1:exon
so has part: feature:611292-611369:-1:exon
so has part: feature:610852-610986:-1:exon
so has part: feature:606686-606794:-1:exon
so has part: feature:605693-605753:-1:exon
so has part: feature:603998-604082:-1:exon
so has part: feature:602206-602221:-1:exon

position:602206:-1
position: 602206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625377-625484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624554-624717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623692-623798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617523-617657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617360-617439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616493-616627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615404-615473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615002-615093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612162-612287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611903-611987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:611579-611684:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:611292-611369:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:610852-610986:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:606686-606794:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:605693-605753:-1:exon

position:605693:-1
position: 605693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605753:-1
position: 605753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:603998-604082:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:602206-602221:-1:exon

u2af1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: u2af1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(649356..683344)
location: region:649356-683344:-1
so has part: feature:649356-683344:-1:exon
subclass of: SO_0000010

109938458
type: Gene
SIO_000068: ncbigene

position:649356:-1
position: 649356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683344:-1
position: 683344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649356-683344:-1:exon

u2af1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: u2af1
product: U2 small nuclear RNA auxiliary factor 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020536864.2
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649356..649651,654945..655037,658450..658583,658774..658872,662157..662206,672995..673061,678609..678696,683197..683344))
location: region:649356-683344:-1
so has part: feature:683197-683344:-1:exon
so has part: feature:678609-678696:-1:exon
so has part: feature:672995-673061:-1:exon
so has part: feature:662157-662206:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:649356-649651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683197-683344:-1:exon

position:683197:-1
position: 683197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678609-678696:-1:exon

position:678609:-1
position: 678609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678696:-1
position: 678696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:672995-673061:-1:exon

position:672995:-1
position: 672995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673061:-1
position: 673061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:662157-662206:-1:exon

position:662157:-1
position: 662157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662206:-1
position: 662206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:658774-658872:-1:exon

position:658774:-1
position: 658774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658872:-1
position: 658872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:658450-658583:-1:exon

position:658450:-1
position: 658450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658583:-1
position: 658583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:654945-655037:-1:exon

position:654945:-1
position: 654945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655037:-1
position: 655037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:649356-649651:-1:exon

position:649651:-1
position: 649651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

u2af1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: u2af1
product: U2 small nuclear RNA auxiliary factor 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020536866.2
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649356..649651,654945..655037,658450..658583,658774..658872,662157..662206,673997..674063,678609..678696,683197..683329))
location: region:649356-683329:-1
so has part: feature:683197-683329:-1:exon
so has part: feature:678609-678696:-1:exon
so has part: feature:673997-674063:-1:exon
so has part: feature:662157-662206:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:649356-649651:-1:exon

position:683329:-1
position: 683329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683197-683329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678609-678696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673997-674063:-1:exon

position:673997:-1
position: 673997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674063:-1
position: 674063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:662157-662206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658774-658872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658450-658583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654945-655037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:649356-649651:-1:exon

u2af1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: u2af1
product: U2 small nuclear RNA auxiliary factor 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020536863.2
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649356..649651,653629..653712,654945..655037,658450..658583,658774..658872,662157..662206,673997..674063,678609..678696,683197..683329))
location: region:649356-683329:-1
so has part: feature:683197-683329:-1:exon
so has part: feature:678609-678696:-1:exon
so has part: feature:673997-674063:-1:exon
so has part: feature:662157-662206:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:653629-653712:-1:exon
so has part: feature:649356-649651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683197-683329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678609-678696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673997-674063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662157-662206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658774-658872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658450-658583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654945-655037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653629-653712:-1:exon

position:653629:-1
position: 653629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653712:-1
position: 653712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:649356-649651:-1:exon

u2af1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: u2af1
product: U2 small nuclear RNA auxiliary factor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020536862.2
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649356..649651,653629..653712,654945..655037,658450..658583,658774..658872,662157..662206,672995..673061,678609..678696,683197..683328))
location: region:649356-683328:-1
so has part: feature:683197-683328:-1:exon
so has part: feature:678609-678696:-1:exon
so has part: feature:672995-673061:-1:exon
so has part: feature:662157-662206:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:653629-653712:-1:exon
so has part: feature:649356-649651:-1:exon

position:683328:-1
position: 683328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683197-683328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678609-678696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:672995-673061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662157-662206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658774-658872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658450-658583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654945-655037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653629-653712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649356-649651:-1:exon

u2af1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: u2af1
product: U2 small nuclear RNA auxiliary factor 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020536867.2
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649356..649651,653629..653712,654945..655037,658450..658583,658774..658872,662157..662206,672995..673061,673997..674019))
location: region:649356-674019:-1
so has part: feature:673997-674019:-1:exon
so has part: feature:672995-673061:-1:exon
so has part: feature:662157-662206:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:653629-653712:-1:exon
so has part: feature:649356-649651:-1:exon

position:674019:-1
position: 674019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673997-674019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:672995-673061:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662157-662206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658774-658872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658450-658583:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654945-655037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653629-653712:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:649356-649651:-1:exon

u2af1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: u2af1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 35 kDa subunit isoform X4
translation: MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNLYRNPQNCTQTADGFHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHEEDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKRHRSRSRSRERKRSRSRERGGRAGRDRDRDRRRSKDRERSGRF
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649522..649651,654945..655037,658450..658583,658774..658872,662157..662206,672995..673061,678609..678696,683197..683240))
location: region:649522-683240:-1
so has part: feature:683197-683240:-1:exon
so has part: feature:678609-678696:-1:exon
so has part: feature:672995-673061:-1:exon
so has part: feature:662157-662206:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:649522-649651:-1:exon

XP_020392453.1
type: Protein
SIO_000068: ncbiprotein

position:649522:-1
position: 649522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683240:-1
position: 683240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683197-683240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678609-678696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:672995-673061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662157-662206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658774-658872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658450-658583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654945-655037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:649522-649651:-1:exon

u2af1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: u2af1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 35 kDa subunit isoform X1
translation: MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNLYRNPQNCTQTADGFHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHEEDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKSQQQGSRVTSSGDKRLLTITPKHLMAAIRHRSRSRSRERKRSRSRERGGRAGRDRDRDRRRSKDRERSGRF
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649522..649651,653629..653712,654945..655037,658450..658583,658774..658872,662157..662206,672995..673061,678609..678696,683197..683240))
location: region:649522-683240:-1
so has part: feature:683197-683240:-1:exon
so has part: feature:678609-678696:-1:exon
so has part: feature:672995-673061:-1:exon
so has part: feature:662157-662206:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:653629-653712:-1:exon
so has part: feature:649522-649651:-1:exon

XP_020392451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:683197-683240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678609-678696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:672995-673061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662157-662206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658774-658872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658450-658583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654945-655037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653629-653712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649522-649651:-1:exon

u2af1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: u2af1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 35 kDa subunit isoform X3
translation: MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHEEDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKRHRSRSRSRERKRSRSRERGGRAGRDRDRDRRRSKDRERSGRF
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649522..649651,654945..655037,658450..658583,658774..658872,662157..662206,673997..674063,678609..678696,683197..683240))
location: region:649522-683240:-1
so has part: feature:683197-683240:-1:exon
so has part: feature:678609-678696:-1:exon
so has part: feature:673997-674063:-1:exon
so has part: feature:662157-662206:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:649522-649651:-1:exon

XP_020392455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:683197-683240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678609-678696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673997-674063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662157-662206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658774-658872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658450-658583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654945-655037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:649522-649651:-1:exon

u2af1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: u2af1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 35 kDa subunit isoform X2
translation: MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHEEDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKSQQQGSRVTSSGDKRLLTITPKHLMAAIRHRSRSRSRERKRSRSRERGGRAGRDRDRDRRRSKDRERSGRF
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649522..649651,653629..653712,654945..655037,658450..658583,658774..658872,662157..662206,673997..674063,678609..678696,683197..683240))
location: region:649522-683240:-1
so has part: feature:683197-683240:-1:exon
so has part: feature:678609-678696:-1:exon
so has part: feature:673997-674063:-1:exon
so has part: feature:662157-662206:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:653629-653712:-1:exon
so has part: feature:649522-649651:-1:exon

XP_020392452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:683197-683240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678609-678696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673997-674063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662157-662206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658774-658872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658450-658583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654945-655037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653629-653712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649522-649651:-1:exon

u2af1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: u2af1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 35 kDa subunit isoform X5
translation: MQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHEEDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKSQQQGSRVTSSGDKRLLTITPKHLMAAIRHRSRSRSRERKRSRSRERGGRAGRDRDRDRRRSKDRERSGRF
SIO_010081: u2af1
subclass of: SO_0000673
so part of: u2af1
location: complement(join(649522..649651,653629..653712,654945..655037,658450..658583,658774..658872,662157..662186))
location: region:649522-662186:-1
so has part: feature:662157-662186:-1:exon
so has part: feature:658774-658872:-1:exon
so has part: feature:658450-658583:-1:exon
so has part: feature:654945-655037:-1:exon
so has part: feature:653629-653712:-1:exon
so has part: feature:649522-649651:-1:exon

XP_020392456.1
type: Protein
SIO_000068: ncbiprotein

position:662186:-1
position: 662186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662157-662186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658774-658872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658450-658583:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654945-655037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653629-653712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649522-649651:-1:exon

cryaa
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cryaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 683441..725394
location: region:683441-725394:1
so has part: feature:683441-725394:1:exon
subclass of: SO_0000010

125484434
type: Gene
SIO_000068: ncbigene

position:683441:1
position: 683441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725394:1
position: 725394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683441-725394:1:exon

cryaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cryaa
product: crystallin, alpha A, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603181.1
SIO_010081: cryaa
subclass of: SO_0000673
so part of: cryaa
location: join(683441..683980,707733..707787,712728..712850,724956..725394)
location: region:683441-725394:1
so has part: feature:683441-683980:1:exon
so has part: feature:707733-707787:1:exon
so has part: feature:712728-712850:1:exon
so has part: feature:724956-725394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683441-683980:1:exon

position:683980:1
position: 683980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707733-707787:1:exon

position:707733:1
position: 707733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707787:1
position: 707787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:712728-712850:1:exon

position:712728:1
position: 712728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712850:1
position: 712850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:724956-725394:1:exon

position:724956:1
position: 724956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cryaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cryaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-crystallin A chain isoform X2
translation: MNKQEQNQSCWKSSAGLAASVKETTELTFWVWRPFLRINSPYYRLPVFRNFLDSGISEVRSEKDRFMINLNVKHFLPEELTVKLVDDFVEIHGKHTERQEDQGRVSREFRRIYHLPSNLDQAAISCSLSTDGLLTLCCPKVRTGDDLTQQDRPIPVTRDEKFGNQPELKADP
SIO_010081: cryaa
subclass of: SO_0000673
so part of: cryaa
location: join(683862..683980,707733..707787,712728..712850,724956..725177)
location: region:683862-725177:1
so has part: feature:683862-683980:1:exon
so has part: feature:707733-707787:1:exon
so has part: feature:712728-712850:1:exon
so has part: feature:724956-725177:1:exon

XP_048459138.1
type: Protein
SIO_000068: ncbiprotein

position:683862:1
position: 683862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725177:1
position: 725177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683862-683980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:707733-707787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:712728-712850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724956-725177:1:exon

cryaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cryaa
product: crystallin, alpha A, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603180.1
SIO_010081: cryaa
subclass of: SO_0000673
so part of: cryaa
location: join(707599..707787,712728..712850,724956..725394)
location: region:707599-725394:1
so has part: feature:707599-707787:1:exon
so has part: feature:712728-712850:1:exon
so has part: feature:724956-725394:1:exon

position:707599:1
position: 707599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707599-707787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:712728-712850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724956-725394:1:exon

cryaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cryaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-crystallin A chain isoform X1
translation: MDLAIQYPWFRRPLASFYPSRLFDQFFGESPFDYDIFPIFSSTISPYYRLPVFRNFLDSGISEVRSEKDRFMINLNVKHFLPEELTVKLVDDFVEIHGKHTERQEDQGRVSREFRRIYHLPSNLDQAAISCSLSTDGLLTLCCPKVRTGDDLTQQDRPIPVTRDEKFGNQPELKADP
SIO_010081: cryaa
subclass of: SO_0000673
so part of: cryaa
location: join(707599..707787,712728..712850,724956..725177)
location: region:707599-725177:1
so has part: feature:707599-707787:1:exon
so has part: feature:712728-712850:1:exon
so has part: feature:724956-725177:1:exon

XP_048459137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707599-707787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:712728-712850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724956-725177:1:exon

sik1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: sik1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(741423..761479)
location: region:741423-761479:-1
so has part: feature:741423-761479:-1:exon
subclass of: SO_0000010

109925467
type: Gene
SIO_000068: ncbigene

position:741423:-1
position: 741423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761479:-1
position: 761479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741423-761479:-1:exon

sik1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sik1
product: salt-inducible kinase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603184.1
SIO_010081: sik1
subclass of: SO_0000673
so part of: sik1
location: complement(join(741423..742827,743300..743382,743485..743648,743744..744001,746849..747077,747989..748141,748690..748895,749051..749174,749269..749393,754295..754456,754727..754790,761009..761125,761224..761479))
location: region:741423-761479:-1
so has part: feature:761224-761479:-1:exon
so has part: feature:761009-761125:-1:exon
so has part: feature:754727-754790:-1:exon
so has part: feature:754295-754456:-1:exon
so has part: feature:749269-749393:-1:exon
so has part: feature:749051-749174:-1:exon
so has part: feature:748690-748895:-1:exon
so has part: feature:747989-748141:-1:exon
so has part: feature:746849-747077:-1:exon
so has part: feature:743744-744001:-1:exon
so has part: feature:743485-743648:-1:exon
so has part: feature:743300-743382:-1:exon
so has part: feature:741423-742827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761224-761479:-1:exon

position:761224:-1
position: 761224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:761009-761125:-1:exon

position:761009:-1
position: 761009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761125:-1
position: 761125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:754727-754790:-1:exon

position:754727:-1
position: 754727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754790:-1
position: 754790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:754295-754456:-1:exon

position:754295:-1
position: 754295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754456:-1
position: 754456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:749269-749393:-1:exon

position:749269:-1
position: 749269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749393:-1
position: 749393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:749051-749174:-1:exon

position:749051:-1
position: 749051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749174:-1
position: 749174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:748690-748895:-1:exon

position:748690:-1
position: 748690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748895:-1
position: 748895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:747989-748141:-1:exon

position:747989:-1
position: 747989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748141:-1
position: 748141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:746849-747077:-1:exon

position:746849:-1
position: 746849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747077:-1
position: 747077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:743744-744001:-1:exon

position:743744:-1
position: 743744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744001:-1
position: 744001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:743485-743648:-1:exon

position:743485:-1
position: 743485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743648:-1
position: 743648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:743300-743382:-1:exon

position:743300:-1
position: 743300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743382:-1
position: 743382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:741423-742827:-1:exon

position:742827:-1
position: 742827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sik1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: sik1
product: salt-inducible kinase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603183.1
SIO_010081: sik1
subclass of: SO_0000673
so part of: sik1
location: complement(join(741423..742827,743300..743382,743485..743648,743744..744001,746849..747080,747989..748141,748690..748895,749051..749174,749269..749393,754295..754456,754727..754790,761009..761125,761224..761466))
location: region:741423-761466:-1
so has part: feature:761224-761466:-1:exon
so has part: feature:761009-761125:-1:exon
so has part: feature:754727-754790:-1:exon
so has part: feature:754295-754456:-1:exon
so has part: feature:749269-749393:-1:exon
so has part: feature:749051-749174:-1:exon
so has part: feature:748690-748895:-1:exon
so has part: feature:747989-748141:-1:exon
so has part: feature:746849-747080:-1:exon
so has part: feature:743744-744001:-1:exon
so has part: feature:743485-743648:-1:exon
so has part: feature:743300-743382:-1:exon
so has part: feature:741423-742827:-1:exon

position:761466:-1
position: 761466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761224-761466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761009-761125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754727-754790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:754295-754456:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749269-749393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749051-749174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748690-748895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747989-748141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746849-747080:-1:exon

position:747080:-1
position: 747080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:743744-744001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:743485-743648:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:743300-743382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:741423-742827:-1:exon

sik1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sik1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK1 isoform X2
translation: MVMTDCQEVPGLRQRRPLRVGFYEIEKTLGKGNFAVVKLARHRVTRSRVAIKIIDKTRLDPGNLEKIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEFAQNGEMFDYLSANGPLSESEACAKFWQILMAVEYCHNHHIVHRDLKSENLLLDDNMNIKIADFGFGNFYKHGESLSTWCGSPPYAAPEVFEGKEYEGPHIDIWSLGVVLYVLVCGSLPFDGPTLPVLRQRVIEGRFRIPFFLSEDCENLIRRMLIVDPLKRITVSQIKQHRWMLTQKPPTYTLKDYNSNLGNYNQQVLSLMHTLGVDKQKTIESLQNSSYNHFSAIYYLLLERVKEHRSNQAMSYQSSAQYQVPRAACEHFQTEPVLLQVDASVNVLIRNRSISRCSLLDTTISEEARQEQDLEENIMEKIQTPLHTLSSANRRHTVAGVSAHLNNETAPCTAISSQARIPDDAYSNSCLMTSSDDGFHSPNIMRFTDEAMAPQFVYTTSATPILQPQEHGAGICDTQLPLTFQEGRRASDTSLTAGLKPFRQQLRKSTRAKGFFGLNKITGITQHIWRSPSCSGSRNRAAQQHPRGNLQQVENILPNPVPRISTEGSNLLDKVLHQQKMLQLRCLNSCQPKCFAEPESMKTPVLQSVMELAHDFKPASHLTPSLFLSDFTQTDSEAAVCTAQSQLHCLLGVNLMQGPLSTSPMDLHPTFSTFLHQTLFSSQKQSEGLGMDCEMEDLTRTQLDQIVWVN
SIO_010081: sik1
subclass of: SO_0000673
so part of: sik1
location: complement(join(742434..742827,743300..743382,743485..743648,743744..744001,746849..747077,747989..748141,748690..748895,749051..749174,749269..749393,754295..754456,754727..754790,761009..761125,761224..761367))
location: region:742434-761367:-1
so has part: feature:761224-761367:-1:exon
so has part: feature:761009-761125:-1:exon
so has part: feature:754727-754790:-1:exon
so has part: feature:754295-754456:-1:exon
so has part: feature:749269-749393:-1:exon
so has part: feature:749051-749174:-1:exon
so has part: feature:748690-748895:-1:exon
so has part: feature:747989-748141:-1:exon
so has part: feature:746849-747077:-1:exon
so has part: feature:743744-744001:-1:exon
so has part: feature:743485-743648:-1:exon
so has part: feature:743300-743382:-1:exon
so has part: feature:742434-742827:-1:exon

XP_048459141.1
type: Protein
SIO_000068: ncbiprotein

position:742434:-1
position: 742434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761367:-1
position: 761367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761224-761367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761009-761125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754727-754790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:754295-754456:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749269-749393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749051-749174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748690-748895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747989-748141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746849-747077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:743744-744001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:743485-743648:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:743300-743382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:742434-742827:-1:exon

sik1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: sik1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK1 isoform X1
translation: MVMTDCQEVPGLRQRRPLRVGFYEIEKTLGKGNFAVVKLARHRVTRSRVAIKIIDKTRLDPGNLEKIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEFAQNGEMFDYLSANGPLSESEACAKFWQILMAVEYCHNHHIVHRDLKSENLLLDDNMNIKIADFGFGNFYKHGESLSTWCGSPPYAAPEVFEGKEYEGPHIDIWSLGVVLYVLVCGSLPFDGPTLPVLRQRVIEGRFRIPFFLSEDCENLIRRMLIVDPLKRITVSQIKQHRWMLTQKPPTYTLKDYNSNLGNYNQQVLSLMHTLGVDKQKTIESLQNSSYNHFSAIYYLLLERVKEHRSNQAMSYQSSAQYQVPRAACEHFQTEQPVLLQVDASVNVLIRNRSISRCSLLDTTISEEARQEQDLEENIMEKIQTPLHTLSSANRRHTVAGVSAHLNNETAPCTAISSQARIPDDAYSNSCLMTSSDDGFHSPNIMRFTDEAMAPQFVYTTSATPILQPQEHGAGICDTQLPLTFQEGRRASDTSLTAGLKPFRQQLRKSTRAKGFFGLNKITGITQHIWRSPSCSGSRNRAAQQHPRGNLQQVENILPNPVPRISTEGSNLLDKVLHQQKMLQLRCLNSCQPKCFAEPESMKTPVLQSVMELAHDFKPASHLTPSLFLSDFTQTDSEAAVCTAQSQLHCLLGVNLMQGPLSTSPMDLHPTFSTFLHQTLFSSQKQSEGLGMDCEMEDLTRTQLDQIVWVN
SIO_010081: sik1
subclass of: SO_0000673
so part of: sik1
location: complement(join(742434..742827,743300..743382,743485..743648,743744..744001,746849..747080,747989..748141,748690..748895,749051..749174,749269..749393,754295..754456,754727..754790,761009..761125,761224..761367))
location: region:742434-761367:-1
so has part: feature:761224-761367:-1:exon
so has part: feature:761009-761125:-1:exon
so has part: feature:754727-754790:-1:exon
so has part: feature:754295-754456:-1:exon
so has part: feature:749269-749393:-1:exon
so has part: feature:749051-749174:-1:exon
so has part: feature:748690-748895:-1:exon
so has part: feature:747989-748141:-1:exon
so has part: feature:746849-747080:-1:exon
so has part: feature:743744-744001:-1:exon
so has part: feature:743485-743648:-1:exon
so has part: feature:743300-743382:-1:exon
so has part: feature:742434-742827:-1:exon

XP_048459140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:761224-761367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761009-761125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754727-754790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:754295-754456:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749269-749393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749051-749174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748690-748895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747989-748141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746849-747080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:743744-744001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:743485-743648:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:743300-743382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:742434-742827:-1:exon

ndufv3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ndufv3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(774032..787929)
location: region:774032-787929:-1
so has part: feature:774032-787929:-1:exon
subclass of: SO_0000010

125484363
type: Gene
SIO_000068: ncbigene

position:774032:-1
position: 774032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787929:-1
position: 787929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774032-787929:-1:exon

ndufv3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ndufv3
product: NADH:ubiquinone oxidoreductase subunit V3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602641.1
SIO_010081: ndufv3
subclass of: SO_0000673
so part of: ndufv3
location: complement(join(774032..774298,777707..778426,786145..786226,787697..787812,787870..787929))
location: region:774032-787929:-1
so has part: feature:787870-787929:-1:exon
so has part: feature:787697-787812:-1:exon
so has part: feature:786145-786226:-1:exon
so has part: feature:777707-778426:-1:exon
so has part: feature:774032-774298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:787870-787929:-1:exon

position:787870:-1
position: 787870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:787697-787812:-1:exon

position:787697:-1
position: 787697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787812:-1
position: 787812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:786145-786226:-1:exon

position:786145:-1
position: 786145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786226:-1
position: 786226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777707-778426:-1:exon

position:777707:-1
position: 777707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778426:-1
position: 778426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:774032-774298:-1:exon

position:774298:-1
position: 774298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ndufv3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ndufv3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein ndufv3
translation: MAAALFGSRVGGLRQVLMVRLGFQAVTLTTKATAPQKKKKVKGAEAAEISSRDSPIQSTEITSTERASLLSKKTVLLFPRKIPDPLLGEALNSTTSTPGGDVCSVAANAEPVAEKSTAHEESSSSSDSSSDSDEETVTKDAVKTPAEFSKPEPVLSGADWTRERAEGDRGRLVTEPQELPQTVKVPVSKDSTRMELSKGEGREILAAQGNHDLLSSAACDRAEATVTAPEASFLPRNTLRTQETTPSSPSREWVLPAQGESQEPTEERSPEATDPASADTPHESVGKRVEEPDHEVLDTSTYKNTQHHDYNPLTFIDLDVDMAKYRLPQPSSGRITPHH
SIO_010081: ndufv3
subclass of: SO_0000673
so part of: ndufv3
location: complement(join(774126..774298,777707..778426,786145..786226,787697..787741))
location: region:774126-787741:-1
so has part: feature:787697-787741:-1:exon
so has part: feature:786145-786226:-1:exon
so has part: feature:777707-778426:-1:exon
so has part: feature:774126-774298:-1:exon

XP_048458598.1
type: Protein
SIO_000068: ncbiprotein

position:774126:-1
position: 774126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787741:-1
position: 787741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787697-787741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:786145-786226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777707-778426:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774126-774298:-1:exon

wdr4
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: wdr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 787912..807662
location: region:787912-807662:1
so has part: feature:787912-807662:1:exon
subclass of: SO_0000010

109924852
type: Gene
SIO_000068: ncbigene

position:787912:1
position: 787912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807662:1
position: 807662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787912-807662:1:exon

wdr4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: wdr4
product: WD repeat domain 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020524829.2
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(787912..788103,788250..788288,793500..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..807662)
location: region:787912-807662:1
so has part: feature:787912-788103:1:exon
so has part: feature:788250-788288:1:exon
so has part: feature:793500-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-807662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:787912-788103:1:exon

position:788103:1
position: 788103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:788250-788288:1:exon

position:788250:1
position: 788250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788288:1
position: 788288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:793500-793640:1:exon

position:793500:1
position: 793500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793640:1
position: 793640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:793993-794149:1:exon

position:793993:1
position: 793993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794149:1
position: 794149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:796228-796340:1:exon

position:796228:1
position: 796228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796340:1
position: 796340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:798675-798735:1:exon

position:798675:1
position: 798675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798735:1
position: 798735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:800253-800342:1:exon

position:800253:1
position: 800253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800342:1
position: 800342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:804736-804803:1:exon

position:804736:1
position: 804736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804803:1
position: 804803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:805295-805469:1:exon

position:805295:1
position: 805295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805469:1
position: 805469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:805812-805881:1:exon

position:805812:1
position: 805812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805881:1
position: 805881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:806783-807662:1:exon

position:806783:1
position: 806783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

wdr4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: wdr4
product: WD repeat domain 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602637.1
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(787912..788103,793500..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..807662)
location: region:787912-807662:1
so has part: feature:787912-788103:1:exon
so has part: feature:793500-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-807662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:787912-788103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793500-793640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793993-794149:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796228-796340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:798675-798735:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800253-800342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:804736-804803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805295-805469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:805812-805881:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806783-807662:1:exon

wdr4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: wdr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 isoform X1
translation: MALGRCGSLVFLGGGGGGGGGGGSSPPRIAGVSLGESGKAFVYDCPTQTGSQAGPSDDERNGLVAFAFSPSGTYVAVTMDNKQLLLFRTRPWECLSVRTALRRSTSVTITGAEDRILLADKSGDVYSFSINKPDSPGQLQLGHLSMLLAVAVSPDDRYVITADRDEKIRVSLLEQPYIIEAFCLGHREFVSQLSIPPNHPQLLVSGSGDGTIRLWEYENGTEMHCLDLSELRPSGCEKNRCAVVRLVHCRGKDFFAVLCDSLSSVYVLELDVKAERLIHQQTITAKQRAWDVTFDDCGGLWLLDGDIAVLYQLHEGLWREIPDHPDQMRIKEVIRSNWPVFEGSGSAISYSNLYKMSIDNMAEYQLKKEQRIDQRQKKRTSELMAESRDSKRPRVGGVMM
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(787991..788103,788250..788288,793500..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..806958)
location: region:787991-806958:1
so has part: feature:787991-788103:1:exon
so has part: feature:788250-788288:1:exon
so has part: feature:793500-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-806958:1:exon

XP_020380418.2
type: Protein
SIO_000068: ncbiprotein

position:787991:1
position: 787991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806958:1
position: 806958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787991-788103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788250-788288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793500-793640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793993-794149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796228-796340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:798675-798735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800253-800342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:804736-804803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:805295-805469:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:805812-805881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:806783-806958:1:exon

wdr4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: wdr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 isoform X2
translation: MALGRCGSLVFLGGGGGGGGGGGSSPPRIAGVSLGESGQAGPSDDERNGLVAFAFSPSGTYVAVTMDNKQLLLFRTRPWECLSVRTALRRSTSVTITGAEDRILLADKSGDVYSFSINKPDSPGQLQLGHLSMLLAVAVSPDDRYVITADRDEKIRVSLLEQPYIIEAFCLGHREFVSQLSIPPNHPQLLVSGSGDGTIRLWEYENGTEMHCLDLSELRPSGCEKNRCAVVRLVHCRGKDFFAVLCDSLSSVYVLELDVKAERLIHQQTITAKQRAWDVTFDDCGGLWLLDGDIAVLYQLHEGLWREIPDHPDQMRIKEVIRSNWPVFEGSGSAISYSNLYKMSIDNMAEYQLKKEQRIDQRQKKRTSELMAESRDSKRPRVGGVMM
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(787991..788103,793500..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..806958)
location: region:787991-806958:1
so has part: feature:787991-788103:1:exon
so has part: feature:793500-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-806958:1:exon

XP_048458594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:787991-788103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793500-793640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793993-794149:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796228-796340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:798675-798735:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800253-800342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:804736-804803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805295-805469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:805812-805881:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806783-806958:1:exon

wdr4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: wdr4
product: WD repeat domain 4, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602640.1
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(788031..788103,788250..788288,793504..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..807662)
location: region:788031-807662:1
so has part: feature:788031-788103:1:exon
so has part: feature:788250-788288:1:exon
so has part: feature:793504-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-807662:1:exon

position:788031:1
position: 788031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788031-788103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788250-788288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793504-793640:1:exon

position:793504:1
position: 793504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:793993-794149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796228-796340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:798675-798735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800253-800342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:804736-804803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:805295-805469:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:805812-805881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:806783-807662:1:exon

wdr4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: wdr4
product: WD repeat domain 4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602638.1
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(788032..788103,788250..788288,789555..789755,793500..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..807662)
location: region:788032-807662:1
so has part: feature:788032-788103:1:exon
so has part: feature:788250-788288:1:exon
so has part: feature:789555-789755:1:exon
so has part: feature:793500-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-807662:1:exon

position:788032:1
position: 788032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788032-788103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788250-788288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789555-789755:1:exon

position:789555:1
position: 789555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789755:1
position: 789755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:793500-793640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793993-794149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796228-796340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:798675-798735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800253-800342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804736-804803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:805295-805469:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805812-805881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:806783-807662:1:exon

wdr4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: wdr4
product: WD repeat domain 4, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602639.1
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(788032..788103,788250..788288,789555..789755,793504..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..807662)
location: region:788032-807662:1
so has part: feature:788032-788103:1:exon
so has part: feature:788250-788288:1:exon
so has part: feature:789555-789755:1:exon
so has part: feature:793504-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-807662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788032-788103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788250-788288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789555-789755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793504-793640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793993-794149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796228-796340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:798675-798735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800253-800342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804736-804803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:805295-805469:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805812-805881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:806783-807662:1:exon

wdr4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: wdr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 isoform X3
translation: MDNKQLLLFRTRPWECLSVRTALRRSTSVTITGAEDRILLADKSGDVYSFSINKPDSPGQLQLGHLSMLLAVAVSPDDRYVITADRDEKIRVSLLEQPYIIEAFCLGHREFVSQLSIPPNHPQLLVSGSGDGTIRLWEYENGTEMHCLDLSELRPSGCEKNRCAVVRLVHCRGKDFFAVLCDSLSSVYVLELDVKAERLIHQQTITAKQRAWDVTFDDCGGLWLLDGDIAVLYQLHEGLWREIPDHPDQMRIKEVIRSNWPVFEGSGSAISYSNLYKMSIDNMAEYQLKKEQRIDQRQKKRTSELMAESRDSKRPRVGGVMM
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(793582..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..806958)
location: region:793582-806958:1
so has part: feature:793582-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-806958:1:exon

XP_048458595.1
type: Protein
SIO_000068: ncbiprotein

position:793582:1
position: 793582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793582-793640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793993-794149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796228-796340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798675-798735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:800253-800342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804736-804803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805295-805469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805812-805881:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806783-806958:1:exon

wdr4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: wdr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 isoform X3
translation: MDNKQLLLFRTRPWECLSVRTALRRSTSVTITGAEDRILLADKSGDVYSFSINKPDSPGQLQLGHLSMLLAVAVSPDDRYVITADRDEKIRVSLLEQPYIIEAFCLGHREFVSQLSIPPNHPQLLVSGSGDGTIRLWEYENGTEMHCLDLSELRPSGCEKNRCAVVRLVHCRGKDFFAVLCDSLSSVYVLELDVKAERLIHQQTITAKQRAWDVTFDDCGGLWLLDGDIAVLYQLHEGLWREIPDHPDQMRIKEVIRSNWPVFEGSGSAISYSNLYKMSIDNMAEYQLKKEQRIDQRQKKRTSELMAESRDSKRPRVGGVMM
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(793582..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..806958)
location: region:793582-806958:1
so has part: feature:793582-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-806958:1:exon

XP_048458596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:793582-793640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793993-794149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796228-796340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798675-798735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:800253-800342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804736-804803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805295-805469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805812-805881:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806783-806958:1:exon

wdr4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: wdr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 isoform X3
translation: MDNKQLLLFRTRPWECLSVRTALRRSTSVTITGAEDRILLADKSGDVYSFSINKPDSPGQLQLGHLSMLLAVAVSPDDRYVITADRDEKIRVSLLEQPYIIEAFCLGHREFVSQLSIPPNHPQLLVSGSGDGTIRLWEYENGTEMHCLDLSELRPSGCEKNRCAVVRLVHCRGKDFFAVLCDSLSSVYVLELDVKAERLIHQQTITAKQRAWDVTFDDCGGLWLLDGDIAVLYQLHEGLWREIPDHPDQMRIKEVIRSNWPVFEGSGSAISYSNLYKMSIDNMAEYQLKKEQRIDQRQKKRTSELMAESRDSKRPRVGGVMM
SIO_010081: wdr4
subclass of: SO_0000673
so part of: wdr4
location: join(793582..793640,793993..794149,796228..796340,798675..798735,800253..800342,804736..804803,805295..805469,805812..805881,806783..806958)
location: region:793582-806958:1
so has part: feature:793582-793640:1:exon
so has part: feature:793993-794149:1:exon
so has part: feature:796228-796340:1:exon
so has part: feature:798675-798735:1:exon
so has part: feature:800253-800342:1:exon
so has part: feature:804736-804803:1:exon
so has part: feature:805295-805469:1:exon
so has part: feature:805812-805881:1:exon
so has part: feature:806783-806958:1:exon

XP_048458597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:793582-793640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793993-794149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796228-796340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798675-798735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:800253-800342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804736-804803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805295-805469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805812-805881:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806783-806958:1:exon

pde9aa
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pde9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(813865..863034)
location: region:813865-863034:-1
so has part: feature:813865-863034:-1:exon
subclass of: SO_0000010

109925622
type: Gene
SIO_000068: ncbigene

position:813865:-1
position: 813865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863034:-1
position: 863034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813865-863034:-1:exon

pde9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pde9aa
product: phosphodiesterase 9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048603007.1
SIO_010081: pde9aa
subclass of: SO_0000673
so part of: pde9aa
location: complement(join(813865..815171,815680..815753,817628..817723,818566..818694,818866..818970,825594..825707,827424..827580,847480..847554,847638..847692,849788..849831,861426..861496,862887..863034))
location: region:813865-863034:-1
so has part: feature:862887-863034:-1:exon
so has part: feature:861426-861496:-1:exon
so has part: feature:849788-849831:-1:exon
so has part: feature:847638-847692:-1:exon
so has part: feature:847480-847554:-1:exon
so has part: feature:827424-827580:-1:exon
so has part: feature:825594-825707:-1:exon
so has part: feature:818866-818970:-1:exon
so has part: feature:818566-818694:-1:exon
so has part: feature:817628-817723:-1:exon
so has part: feature:815680-815753:-1:exon
so has part: feature:813865-815171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:862887-863034:-1:exon

position:862887:-1
position: 862887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:861426-861496:-1:exon

position:861426:-1
position: 861426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861496:-1
position: 861496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:849788-849831:-1:exon

position:849788:-1
position: 849788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849831:-1
position: 849831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:847638-847692:-1:exon

position:847638:-1
position: 847638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847692:-1
position: 847692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:847480-847554:-1:exon

position:847480:-1
position: 847480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847554:-1
position: 847554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:827424-827580:-1:exon

position:827424:-1
position: 827424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827580:-1
position: 827580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:825594-825707:-1:exon

position:825594:-1
position: 825594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825707:-1
position: 825707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:818866-818970:-1:exon

position:818866:-1
position: 818866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818970:-1
position: 818970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:818566-818694:-1:exon

position:818566:-1
position: 818566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818694:-1
position: 818694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:817628-817723:-1:exon

position:817628:-1
position: 817628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817723:-1
position: 817723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:815680-815753:-1:exon

position:815680:-1
position: 815680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815753:-1
position: 815753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:813865-815171:-1:exon

position:815171:-1
position: 815171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pde9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pde9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
translation: MGSASSTHRSKAIFLDIGESRTQKVIFSKYCSPSDIRELLCSTTGLARSPYRVVALTGAQLSEKDEVFQNVLAQVAEQFSRAFKINELKSEVTNRLSILEKRVECTYQINARTELAVRYNDISPLENHHCAFTFQISSQPESNIFSNMDPEIFKQARQGIINLILATDMARHGEILDSFKQKIDNFDFSNEEDVTCLKMILIKCCDISNEVRPMEVAEPWVDCLLQEYFMQSDREKAEGLPTAPFMDREKVTKVTAQIGFIKFVLTPMFELVAKLFPQIEEPLVQPLRESRDRYEELKQIDDATNEIHKNKNESLSIGGKKK
SIO_010081: pde9aa
subclass of: SO_0000673
so part of: pde9aa
location: complement(join(815703..815753,817628..817723,818566..818694,818866..818970,825594..825707,827424..827580,847480..847554,847638..847692,849788..849831,861426..861496,862887..862958))
location: region:815703-862958:-1
so has part: feature:862887-862958:-1:exon
so has part: feature:861426-861496:-1:exon
so has part: feature:849788-849831:-1:exon
so has part: feature:847638-847692:-1:exon
so has part: feature:847480-847554:-1:exon
so has part: feature:827424-827580:-1:exon
so has part: feature:825594-825707:-1:exon
so has part: feature:818866-818970:-1:exon
so has part: feature:818566-818694:-1:exon
so has part: feature:817628-817723:-1:exon
so has part: feature:815703-815753:-1:exon

XP_048458964.1
type: Protein
SIO_000068: ncbiprotein

position:815703:-1
position: 815703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862958:-1
position: 862958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862887-862958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:861426-861496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:849788-849831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847638-847692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:847480-847554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:827424-827580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:825594-825707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:818866-818970:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:818566-818694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:817628-817723:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:815703-815753:-1:exon

slc37a1
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: slc37a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(881129..966806)
location: region:881129-966806:-1
so has part: feature:881129-966806:-1:exon
subclass of: SO_0000010

109920350
type: Gene
SIO_000068: ncbigene

position:881129:-1
position: 881129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966806:-1
position: 966806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881129-966806:-1:exon

slc37a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: slc37a1
product: solute carrier family 37 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048603172.1
SIO_010081: slc37a1
subclass of: SO_0000673
so part of: slc37a1
location: complement(join(881129..881939,890305..890366,898962..899059,902225..902303,906089..906162,916039..916087,918152..918237,921018..921080,923021..923111,928746..928892,937788..937871,940507..940544,943950..944116,944238..944314,944927..945062,947665..947743,949826..949955,954216..954297,966612..966806))
location: region:881129-966806:-1
so has part: feature:966612-966806:-1:exon
so has part: feature:954216-954297:-1:exon
so has part: feature:949826-949955:-1:exon
so has part: feature:947665-947743:-1:exon
so has part: feature:944927-945062:-1:exon
so has part: feature:944238-944314:-1:exon
so has part: feature:943950-944116:-1:exon
so has part: feature:940507-940544:-1:exon
so has part: feature:937788-937871:-1:exon
so has part: feature:928746-928892:-1:exon
so has part: feature:923021-923111:-1:exon
so has part: feature:921018-921080:-1:exon
so has part: feature:918152-918237:-1:exon
so has part: feature:916039-916087:-1:exon
so has part: feature:906089-906162:-1:exon
so has part: feature:902225-902303:-1:exon
so has part: feature:898962-899059:-1:exon
so has part: feature:890305-890366:-1:exon
so has part: feature:881129-881939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:966612-966806:-1:exon

position:966612:-1
position: 966612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:954216-954297:-1:exon

position:954216:-1
position: 954216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954297:-1
position: 954297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:949826-949955:-1:exon

position:949826:-1
position: 949826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949955:-1
position: 949955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:947665-947743:-1:exon

position:947665:-1
position: 947665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947743:-1
position: 947743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:944927-945062:-1:exon

position:944927:-1
position: 944927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945062:-1
position: 945062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:944238-944314:-1:exon

position:944238:-1
position: 944238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944314:-1
position: 944314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:943950-944116:-1:exon

position:943950:-1
position: 943950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944116:-1
position: 944116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:940507-940544:-1:exon

position:940507:-1
position: 940507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940544:-1
position: 940544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:937788-937871:-1:exon

position:937788:-1
position: 937788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937871:-1
position: 937871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:928746-928892:-1:exon

position:928746:-1
position: 928746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928892:-1
position: 928892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:923021-923111:-1:exon

position:923021:-1
position: 923021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923111:-1
position: 923111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:921018-921080:-1:exon

position:921018:-1
position: 921018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921080:-1
position: 921080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:918152-918237:-1:exon

position:918152:-1
position: 918152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918237:-1
position: 918237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:916039-916087:-1:exon

position:916039:-1
position: 916039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916087:-1
position: 916087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:906089-906162:-1:exon

position:906089:-1
position: 906089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906162:-1
position: 906162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:902225-902303:-1:exon

position:902225:-1
position: 902225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902303:-1
position: 902303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:898962-899059:-1:exon

position:898962:-1
position: 898962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899059:-1
position: 899059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:890305-890366:-1:exon

position:890305:-1
position: 890305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890366:-1
position: 890366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:881129-881939:-1:exon

position:881939:-1
position: 881939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc37a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: slc37a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A1
translation: MAPLPLGIRFITSFTRDQCYRTFTLILTFLLYAAYHLSRKPISIVKSALHMNCSLANEVELYSYKEHLIQAKLLKKAFSNDTWCSWEPFDKSNYKQLLGALDYSFLCAYAVGMYVSGIIGERLSIRLYLTFGMLSSGLFTALFGLGYFYNIHNLQYYILIQVANGFVQTTGWPSVVTCIGNFFGKGKRGLIMGIWNSHTSVGNILGSLIAGYWVSSCWGMSFVVPGIIVALMGVVCFLFLIEHPQDVKCALSRARKPSKCSNGWNGFKQKYQFYRNSGSDSLGDPEQECFLKDSDHQISAKSNSLLTSHVVLSNERGHTPAAISFFAALRIPGVVEFALCLLFAKLVSYTFLFWLPMYLANKEHFEAKKAGDLSTLFDVGGIIGGILAGVISDYTKKRATTCGVMLLLAAPTLYTFSAVGYMSLKAIVVMLIGCGALVNGPYALITTAVSADLGTHKSLMGNSKALSTVTAIIDGTGSIGAALGPLLAGLISPTGWNNVFYMLMVADAFALVLLMRLILRELHFKGPKPDQTELKEH
SIO_010081: slc37a1
subclass of: SO_0000673
so part of: slc37a1
location: complement(join(881924..881939,890305..890366,898962..899059,902225..902303,906089..906162,916039..916087,918152..918237,921018..921080,923021..923111,928746..928892,937788..937871,940507..940544,943950..944116,944238..944314,944927..945062,947665..947743,949826..949955,954216..954297,966612..966667))
location: region:881924-966667:-1
so has part: feature:966612-966667:-1:exon
so has part: feature:954216-954297:-1:exon
so has part: feature:949826-949955:-1:exon
so has part: feature:947665-947743:-1:exon
so has part: feature:944927-945062:-1:exon
so has part: feature:944238-944314:-1:exon
so has part: feature:943950-944116:-1:exon
so has part: feature:940507-940544:-1:exon
so has part: feature:937788-937871:-1:exon
so has part: feature:928746-928892:-1:exon
so has part: feature:923021-923111:-1:exon
so has part: feature:921018-921080:-1:exon
so has part: feature:918152-918237:-1:exon
so has part: feature:916039-916087:-1:exon
so has part: feature:906089-906162:-1:exon
so has part: feature:902225-902303:-1:exon
so has part: feature:898962-899059:-1:exon
so has part: feature:890305-890366:-1:exon
so has part: feature:881924-881939:-1:exon

XP_048459129.1
type: Protein
SIO_000068: ncbiprotein

position:881924:-1
position: 881924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966667:-1
position: 966667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966612-966667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954216-954297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949826-949955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947665-947743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:944927-945062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:944238-944314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:943950-944116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:940507-940544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937788-937871:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928746-928892:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:923021-923111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:921018-921080:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918152-918237:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:916039-916087:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:906089-906162:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902225-902303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:898962-899059:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:890305-890366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:881924-881939:-1:exon

slc37a1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: slc37a1
product: solute carrier family 37 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007263268.1
SIO_010081: slc37a1
so part of: slc37a1
location: complement(join(902267..902303,906089..906162,916039..916087,916406..916467,918152..918237,921018..921080,923021..923111,928746..928892,937788..937871,940507..940544,943950..944116,944238..944314,944927..945062,947665..947743,949826..949955,954216..954297,966612..966806))
location: region:902267-966806:-1
so has part: feature:966612-966806:-1:exon
so has part: feature:954216-954297:-1:exon
so has part: feature:949826-949955:-1:exon
so has part: feature:947665-947743:-1:exon
so has part: feature:944927-945062:-1:exon
so has part: feature:944238-944314:-1:exon
so has part: feature:943950-944116:-1:exon
so has part: feature:940507-940544:-1:exon
so has part: feature:937788-937871:-1:exon
so has part: feature:928746-928892:-1:exon
so has part: feature:923021-923111:-1:exon
so has part: feature:921018-921080:-1:exon
so has part: feature:918152-918237:-1:exon
so has part: feature:916406-916467:-1:exon
so has part: feature:916039-916087:-1:exon
so has part: feature:906089-906162:-1:exon
so has part: feature:902267-902303:-1:exon

position:902267:-1
position: 902267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966612-966806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954216-954297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949826-949955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947665-947743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:944927-945062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:944238-944314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:943950-944116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:940507-940544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937788-937871:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928746-928892:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:923021-923111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:921018-921080:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918152-918237:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:916406-916467:-1:exon

position:916406:-1
position: 916406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916467:-1
position: 916467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:916039-916087:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:906089-906162:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:902267-902303:-1:exon

LOC109925067
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 992301..1043840
location: region:992301-1043840:1
so has part: feature:992301-1043840:1:exon
subclass of: SO_0000010

109925067
type: Gene
SIO_000068: ncbigene

position:992301:1
position: 992301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043840:1
position: 1043840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992301-1043840:1:exon

LOC109925067
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925067
product: radial spoke head component 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603008.1
SIO_010081: LOC109925067
subclass of: SO_0000673
so part of: LOC109925067
location: join(992301..992415,997027..997117,1003224..1003359,1004800..1004871,1034764..1034863,1042776..1043840)
location: region:992301-1043840:1
so has part: feature:992301-992415:1:exon
so has part: feature:997027-997117:1:exon
so has part: feature:1003224-1003359:1:exon
so has part: feature:1004800-1004871:1:exon
so has part: feature:1034764-1034863:1:exon
so has part: feature:1042776-1043840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992301-992415:1:exon

position:992415:1
position: 992415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:997027-997117:1:exon

position:997027:1
position: 997027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997117:1
position: 997117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1003224-1003359:1:exon

position:1003224:1
position: 1003224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003359:1
position: 1003359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1004800-1004871:1:exon

position:1004800:1
position: 1004800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004871:1
position: 1004871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1034764-1034863:1:exon

position:1034764:1
position: 1034764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034863:1
position: 1034863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1042776-1043840:1:exon

position:1042776:1
position: 1042776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109925067
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: radial spoke head 1 homolog
translation: MLQGTYRFKNGARYVGEYLQNKKHGQGTFYYPDGSKYEGSWAHDQRHGEGTYHYPNGDTYTGEWLAHQRHGLGTYVYAQTGSKYVGTWVHGKQVEAGELIHLNHRYQGNFLNNNPTGRGKYIFDFGCEQHGEYLQTEQDKTEEEIAEEESVTITVLKWKAEKLSGLTLYSPTFKTEVKADALEAEELAADNTEAADIAEKDVPETDAADTAAPAADAPEVDAPEVDAPEVDAPEVDVPEANAPEADAPEANAPEADAPEADAPEANAPELDAPDVDAPDVDAPEVDAQEVVAPEVDAPEAIVPEADAPLADAPLADAPLADVAEADTSETNAPVTEAFGLDSLSLAEGNEGVSDAASELAAD
SIO_010081: LOC109925067
subclass of: SO_0000673
so part of: LOC109925067
location: join(992301..992415,997027..997117,1003224..1003359,1004800..1004871,1034764..1034863,1042776..1043350)
location: region:992301-1043350:1
so has part: feature:992301-992415:1:exon
so has part: feature:997027-997117:1:exon
so has part: feature:1003224-1003359:1:exon
so has part: feature:1004800-1004871:1:exon
so has part: feature:1034764-1034863:1:exon
so has part: feature:1042776-1043350:1:exon

XP_048458965.1
type: Protein
SIO_000068: ncbiprotein

position:1043350:1
position: 1043350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992301-992415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:997027-997117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1003224-1003359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1004800-1004871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1034764-1034863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042776-1043350:1:exon

LOC109923776
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109923776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1075834..1120361
location: region:1075834-1120361:1
so has part: feature:1075834-1120361:1:exon
subclass of: SO_0000010

109923776
type: Gene
SIO_000068: ncbigene

position:1075834:1
position: 1075834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120361:1
position: 1120361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075834-1120361:1:exon

LOC109923776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109923776
product: ribosomal RNA processing protein 1 homolog A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603193.1
SIO_010081: LOC109923776
subclass of: SO_0000673
so part of: LOC109923776
location: join(1075834..1075967,1077129..1077211,1078810..1078867,1086132..1086217,1086713..1086774,1088005..1088137,1088474..1088538,1089046..1089224,1092213..1092310,1094196..1094293,1097118..1097137,1100617..1100742,1103845..1104425,1109519..1109668,1115640..1115706,1120102..1120361)
location: region:1075834-1120361:1
so has part: feature:1075834-1075967:1:exon
so has part: feature:1077129-1077211:1:exon
so has part: feature:1078810-1078867:1:exon
so has part: feature:1086132-1086217:1:exon
so has part: feature:1086713-1086774:1:exon
so has part: feature:1088005-1088137:1:exon
so has part: feature:1088474-1088538:1:exon
so has part: feature:1089046-1089224:1:exon
so has part: feature:1092213-1092310:1:exon
so has part: feature:1094196-1094293:1:exon
so has part: feature:1097118-1097137:1:exon
so has part: feature:1100617-1100742:1:exon
so has part: feature:1103845-1104425:1:exon
so has part: feature:1109519-1109668:1:exon
so has part: feature:1115640-1115706:1:exon
so has part: feature:1120102-1120361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1075834-1075967:1:exon

position:1075967:1
position: 1075967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077129-1077211:1:exon

position:1077129:1
position: 1077129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077211:1
position: 1077211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1078810-1078867:1:exon

position:1078810:1
position: 1078810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078867:1
position: 1078867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1086132-1086217:1:exon

position:1086132:1
position: 1086132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086217:1
position: 1086217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1086713-1086774:1:exon

position:1086713:1
position: 1086713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086774:1
position: 1086774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1088005-1088137:1:exon

position:1088005:1
position: 1088005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088137:1
position: 1088137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1088474-1088538:1:exon

position:1088474:1
position: 1088474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088538:1
position: 1088538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1089046-1089224:1:exon

position:1089046:1
position: 1089046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089224:1
position: 1089224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1092213-1092310:1:exon

position:1092213:1
position: 1092213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092310:1
position: 1092310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1094196-1094293:1:exon

position:1094196:1
position: 1094196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094293:1
position: 1094293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1097118-1097137:1:exon

position:1097118:1
position: 1097118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097137:1
position: 1097137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1100617-1100742:1:exon

position:1100617:1
position: 1100617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100742:1
position: 1100742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1103845-1104425:1:exon

position:1103845:1
position: 1103845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104425:1
position: 1104425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1109519-1109668:1:exon

position:1109519:1
position: 1109519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109668:1
position: 1109668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1115640-1115706:1:exon

position:1115640:1
position: 1115640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115706:1
position: 1115706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1120102-1120361:1:exon

position:1120102:1
position: 1120102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109923776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109923776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal RNA processing protein 1 homolog A
translation: MAAAAEVQFAQRLASNEKRFRDRAVRKLRRYLSARSQRLSGGFSQEELLKIWKGIFYCMWMQDKPLLQEELANTISQLIHAFKNLDAKFLFMETFFQTMNREWNGIDRLRLDKFYLLIRLMLRQFLEELKSMDWDDSVVNRFLSCVTNEVLKPTSNTEASGIRFHFVDIYLQELAQVGAHQLSADQNLKFIEPFCRIAAKTKDRVLFHVVSQGIFEMIVDQAPFAIDDLINELQGEENEDSVCEELNSSDKEEGPSPSPKINGSTSEQAEGLLLDGQGEKPNPAQHDDDIGPVLQFNYEALADRLFQLSSRGNTPAQNRKRLYKLVKKFRDLAEGIFPQDDFPEDLSTDEEDEDSWRKKKKRKHRVEKLEEKLEEVDKKKSVKGQKRKKKPSKQKLLSVSDRTDEPIVEDGSEGSNPIEQEPARIRKKKLRTTKMKQRLLSAAVSGDVSEVRGQAQENGCSDQLSPSVLSMLPVTSDVDSVTPTAKLKRRRRKIHTDSEGSSFAEDSAPTEPVVGKKVKKLLVKLRKLQSKKQAGGDQPSTNQAAGRRKRKGKELTEGTSDSKKLKVKNCGDAGPCGEIKTSATTAPDEFVKFESTPIPKPIFFKKAKSAEPVSKQQCNMIKVMSMSSAKKVRFGLKKNMTAEFKRTDKSILVSPAGTSRIAFDPEQKPHHSVLKSNSTAAHSPSILAKRASFTRKGRPQKMDSL
SIO_010081: LOC109923776
subclass of: SO_0000673
so part of: LOC109923776
location: join(1075847..1075967,1077129..1077211,1078810..1078867,1086132..1086217,1086713..1086774,1088005..1088137,1088474..1088538,1089046..1089224,1092213..1092310,1094196..1094293,1097118..1097137,1100617..1100742,1103845..1104425,1109519..1109668,1115640..1115706,1120102..1120292)
location: region:1075847-1120292:1
so has part: feature:1075847-1075967:1:exon
so has part: feature:1077129-1077211:1:exon
so has part: feature:1078810-1078867:1:exon
so has part: feature:1086132-1086217:1:exon
so has part: feature:1086713-1086774:1:exon
so has part: feature:1088005-1088137:1:exon
so has part: feature:1088474-1088538:1:exon
so has part: feature:1089046-1089224:1:exon
so has part: feature:1092213-1092310:1:exon
so has part: feature:1094196-1094293:1:exon
so has part: feature:1097118-1097137:1:exon
so has part: feature:1100617-1100742:1:exon
so has part: feature:1103845-1104425:1:exon
so has part: feature:1109519-1109668:1:exon
so has part: feature:1115640-1115706:1:exon
so has part: feature:1120102-1120292:1:exon

XP_048459150.1
type: Protein
SIO_000068: ncbiprotein

position:1075847:1
position: 1075847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120292:1
position: 1120292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075847-1075967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077129-1077211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078810-1078867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086132-1086217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086713-1086774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1088005-1088137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1088474-1088538:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1089046-1089224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1092213-1092310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094196-1094293:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1097118-1097137:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1100617-1100742:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1103845-1104425:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1109519-1109668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1115640-1115706:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1120102-1120292:1:exon

LOC125484402
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1149930..1158003)
location: region:1149930-1158003:-1
so has part: feature:1149930-1158003:-1:exon
subclass of: SO_0000010

125484402
type: Gene
SIO_000068: ncbigene

position:1149930:-1
position: 1149930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158003:-1
position: 1158003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149930-1158003:-1:exon

LOC125484402
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484402
product: radial spoke head 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048603009.1
SIO_010081: LOC125484402
subclass of: SO_0000673
so part of: LOC125484402
location: complement(join(1149930..1149992,1151819..1151932,1157541..1158003))
location: region:1149930-1158003:-1
so has part: feature:1157541-1158003:-1:exon
so has part: feature:1151819-1151932:-1:exon
so has part: feature:1149930-1149992:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1157541-1158003:-1:exon

position:1157541:-1
position: 1157541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1151819-1151932:-1:exon

position:1151819:-1
position: 1151819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151932:-1
position: 1151932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1149930-1149992:-1:exon

position:1149992:-1
position: 1149992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125484402
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: radial spoke head 1 homolog
translation: MSVTESDEFEEEQGPYLGEYEGDRNEENERHGQGKAILPNGDTYEGAYEHGKRHGMKYYETGCTQVPIWKCRIRST
SIO_010081: LOC125484402
subclass of: SO_0000673
so part of: LOC125484402
location: complement(join(1149930..1149992,1151819..1151932,1157541..1157594))
location: region:1149930-1157594:-1
so has part: feature:1157541-1157594:-1:exon
so has part: feature:1151819-1151932:-1:exon
so has part: feature:1149930-1149992:-1:exon

XP_048458966.1
type: Protein
SIO_000068: ncbiprotein

position:1157594:-1
position: 1157594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1157541-1157594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151819-1151932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1149930-1149992:-1:exon

LOC125484467
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1164380..1174092)
location: region:1164380-1174092:-1
so has part: feature:1164380-1174092:-1:exon
subclass of: SO_0000011

125484467
type: Gene
SIO_000068: ncbigene

position:1164380:-1
position: 1164380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174092:-1
position: 1174092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164380-1174092:-1:exon

LOC125484467
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484467
product: uncharacterized LOC125484467
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263305.1
SIO_010081: LOC125484467
subclass of: SO_0000673
so part of: LOC125484467
location: complement(join(1164380..1164994,1167583..1167862,1173163..1174092))
location: region:1164380-1174092:-1
so has part: feature:1173163-1174092:-1:exon
so has part: feature:1167583-1167862:-1:exon
so has part: feature:1164380-1164994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173163-1174092:-1:exon

position:1173163:-1
position: 1173163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167583-1167862:-1:exon

position:1167583:-1
position: 1167583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167862:-1
position: 1167862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1164380-1164994:-1:exon

position:1164994:-1
position: 1164994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pdxka
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pdxka
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1213528..1268915
location: region:1213528-1268915:1
so has part: feature:1213528-1268915:1:exon
subclass of: SO_0000010

109923002
type: Gene
SIO_000068: ncbigene

position:1213528:1
position: 1213528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268915:1
position: 1268915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213528-1268915:1:exon

pdxka
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pdxka
product: pyridoxal (pyridoxine, vitamin B6) kinase a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 18 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048603010.1
SIO_010081: pdxka
subclass of: SO_0000673
so part of: pdxka
location: join(1213528..1213565,1214055..1214312,1215015..1215099,1231721..1231775,1233563..1233667,1234023..1234106,1235423..1235469,1235590..1235675,1236492..1236537,1237095..1237206,1240833..1240969,1250038..1250104,1255051..1255189,1268861..1268915)
location: region:1213528-1268915:1
so has part: feature:1213528-1213565:1:exon
so has part: feature:1214055-1214312:1:exon
so has part: feature:1215015-1215099:1:exon
so has part: feature:1231721-1231775:1:exon
so has part: feature:1233563-1233667:1:exon
so has part: feature:1234023-1234106:1:exon
so has part: feature:1235423-1235469:1:exon
so has part: feature:1235590-1235675:1:exon
so has part: feature:1236492-1236537:1:exon
so has part: feature:1237095-1237206:1:exon
so has part: feature:1240833-1240969:1:exon
so has part: feature:1250038-1250104:1:exon
so has part: feature:1255051-1255189:1:exon
so has part: feature:1268861-1268915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1213528-1213565:1:exon

position:1213565:1
position: 1213565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1214055-1214312:1:exon

position:1214055:1
position: 1214055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214312:1
position: 1214312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1215015-1215099:1:exon

position:1215015:1
position: 1215015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215099:1
position: 1215099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1231721-1231775:1:exon

position:1231721:1
position: 1231721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231775:1
position: 1231775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1233563-1233667:1:exon

position:1233563:1
position: 1233563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233667:1
position: 1233667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1234023-1234106:1:exon

position:1234023:1
position: 1234023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234106:1
position: 1234106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1235423-1235469:1:exon

position:1235423:1
position: 1235423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235469:1
position: 1235469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1235590-1235675:1:exon

position:1235590:1
position: 1235590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235675:1
position: 1235675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1236492-1236537:1:exon

position:1236492:1
position: 1236492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236537:1
position: 1236537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1237095-1237206:1:exon

position:1237095:1
position: 1237095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237206:1
position: 1237206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1240833-1240969:1:exon

position:1240833:1
position: 1240833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240969:1
position: 1240969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1250038-1250104:1:exon

position:1250038:1
position: 1250038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250104:1
position: 1250104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1255051-1255189:1:exon

position:1255051:1
position: 1255051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255189:1
position: 1255189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1268861-1268915:1:exon

position:1268861:1
position: 1268861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pdxka
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pdxka
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridoxal (pyridoxine, vitamin B6) kinase a
translation: MRCYNHQQLHSHCACPELCEDDLLWKLERRHPKREAGPAELVSDDHGLGTGTVRCLKDPDVSTAVLPADAENLLSTRLMGLLQGLEVVSIHRSSFRAIYCFWWHLMDIEERMSWWSLQQSSAPVTALVLGFEVDLVNSVQFSNHTGYDYWKGQTMTAEELQTLYEGLQLNDVTRYDYVLTGYTRDTSFLDKVMEIIQELRRQNPKLVYVCDPVMGDKRNGDGYMYVPENLLPAYKEKVVPLADIITPNQYEAEILAGRKMNTEKEAIEVMDILHAMGPDTVVITSSDLPSALGDNYLVTLGSQRKVIAGGSRVTERIRMEIPKVDAVFVGTGDLFAAMLLAWTHQHPNNLKIACEKTVSALQHIVTRTISNAKAGSETLSLLCLAAAVLLKMTATQTAYLLFLGLCLTLLLFALAYYTYWFGSRIWSQEIPPIPLRT
SIO_010081: pdxka
subclass of: SO_0000673
so part of: pdxka
location: join(1213528..1213565,1214055..1214312,1215015..1215099,1231721..1231775,1233563..1233667,1234023..1234106,1235423..1235469,1235590..1235675,1236492..1236537,1237095..1237206,1240833..1240969,1250038..1250104,1255051..1255189,1268861..1268915)
location: region:1213528-1268915:1
so has part: feature:1213528-1213565:1:exon
so has part: feature:1214055-1214312:1:exon
so has part: feature:1215015-1215099:1:exon
so has part: feature:1231721-1231775:1:exon
so has part: feature:1233563-1233667:1:exon
so has part: feature:1234023-1234106:1:exon
so has part: feature:1235423-1235469:1:exon
so has part: feature:1235590-1235675:1:exon
so has part: feature:1236492-1236537:1:exon
so has part: feature:1237095-1237206:1:exon
so has part: feature:1240833-1240969:1:exon
so has part: feature:1250038-1250104:1:exon
so has part: feature:1255051-1255189:1:exon
so has part: feature:1268861-1268915:1:exon

XP_048458967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1213528-1213565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1214055-1214312:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215015-1215099:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1231721-1231775:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1233563-1233667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234023-1234106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235423-1235469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1235590-1235675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236492-1236537:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237095-1237206:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1240833-1240969:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250038-1250104:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1255051-1255189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1268861-1268915:1:exon

agpat3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: agpat3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1224309..1301739
location: region:1224309-1301739:1
so has part: feature:1224309-1301739:1:exon
subclass of: SO_0000010

109924626
type: Gene
SIO_000068: ncbigene

position:1224309:1
position: 1224309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301739:1
position: 1301739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224309-1301739:1:exon

agpat3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: agpat3
product: 1-acylglycerol-3-phosphate O-acyltransferase 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602725.1
SIO_010081: agpat3
subclass of: SO_0000673
so part of: agpat3
location: join(1224309..1224397,1286376..1286600,1287400..1287569,1288159..1288320,1289655..1289808,1290770..1290872,1292501..1292576,1295749..1295947,1297914..1301739)
location: region:1224309-1301739:1
so has part: feature:1224309-1224397:1:exon
so has part: feature:1286376-1286600:1:exon
so has part: feature:1287400-1287569:1:exon
so has part: feature:1288159-1288320:1:exon
so has part: feature:1289655-1289808:1:exon
so has part: feature:1290770-1290872:1:exon
so has part: feature:1292501-1292576:1:exon
so has part: feature:1295749-1295947:1:exon
so has part: feature:1297914-1301739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1224309-1224397:1:exon

position:1224397:1
position: 1224397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1286376-1286600:1:exon

position:1286376:1
position: 1286376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286600:1
position: 1286600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1287400-1287569:1:exon

position:1287400:1
position: 1287400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287569:1
position: 1287569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1288159-1288320:1:exon

position:1288159:1
position: 1288159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288320:1
position: 1288320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1289655-1289808:1:exon

position:1289655:1
position: 1289655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289808:1
position: 1289808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1290770-1290872:1:exon

position:1290770:1
position: 1290770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290872:1
position: 1290872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1292501-1292576:1:exon

position:1292501:1
position: 1292501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292576:1
position: 1292576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1295749-1295947:1:exon

position:1295749:1
position: 1295749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295947:1
position: 1295947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1297914-1301739:1:exon

position:1297914:1
position: 1297914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

agpat3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: agpat3
product: 1-acylglycerol-3-phosphate O-acyltransferase 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602726.1
SIO_010081: agpat3
subclass of: SO_0000673
so part of: agpat3
location: join(1224484..1224525,1286376..1286600,1287400..1287569,1288159..1288320,1289655..1289808,1290770..1290872,1292501..1292576,1295749..1295947,1297914..1301739)
location: region:1224484-1301739:1
so has part: feature:1224484-1224525:1:exon
so has part: feature:1286376-1286600:1:exon
so has part: feature:1287400-1287569:1:exon
so has part: feature:1288159-1288320:1:exon
so has part: feature:1289655-1289808:1:exon
so has part: feature:1290770-1290872:1:exon
so has part: feature:1292501-1292576:1:exon
so has part: feature:1295749-1295947:1:exon
so has part: feature:1297914-1301739:1:exon

position:1224484:1
position: 1224484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224484-1224525:1:exon

position:1224525:1
position: 1224525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1286376-1286600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287400-1287569:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288159-1288320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289655-1289808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290770-1290872:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1292501-1292576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295749-1295947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1297914-1301739:1:exon

agpat3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: agpat3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
translation: MSVIGYLKTQFIIHLLLGFVFVVSGICINFFQLCTLPIWPINKQLYRHLNCRLAYSLWSQLVLLLEWWSGTECTLFTNQATVDQFGKEHVIVILNHNFEIDFLCGWAMCERHGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRRWDEDRETVVNGLKALRDYPEYMWFLLYCEGTRFTEKKHRISMEVAESKGLPKLKYHLLPRTKGFTTTVKYLRGTVAAVYDVTLNFRDNKNPTLLGILHGKQYHADMCVRRFPLEDIPEDENECAAWLHRLYQEKDALQEQYVKDGTFPGQPIQPRRRPWAFLNWLFWVIVLLTPLFNFVFGVFVSGSPVVICSFLLFVGAASFCVRRLIGVTEIGKGSSYGNQEFKKRM
SIO_010081: agpat3
subclass of: SO_0000673
so part of: agpat3
location: join(1286423..1286600,1287400..1287569,1288159..1288320,1289655..1289808,1290770..1290872,1292501..1292576,1295749..1295947,1297914..1298002)
location: region:1286423-1298002:1
so has part: feature:1286423-1286600:1:exon
so has part: feature:1287400-1287569:1:exon
so has part: feature:1288159-1288320:1:exon
so has part: feature:1289655-1289808:1:exon
so has part: feature:1290770-1290872:1:exon
so has part: feature:1292501-1292576:1:exon
so has part: feature:1295749-1295947:1:exon
so has part: feature:1297914-1298002:1:exon

XP_048458682.1
type: Protein
SIO_000068: ncbiprotein

position:1286423:1
position: 1286423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298002:1
position: 1298002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286423-1286600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287400-1287569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288159-1288320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289655-1289808:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290770-1290872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1292501-1292576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295749-1295947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1297914-1298002:1:exon

agpat3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: agpat3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
translation: MSVIGYLKTQFIIHLLLGFVFVVSGICINFFQLCTLPIWPINKQLYRHLNCRLAYSLWSQLVLLLEWWSGTECTLFTNQATVDQFGKEHVIVILNHNFEIDFLCGWAMCERHGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRRWDEDRETVVNGLKALRDYPEYMWFLLYCEGTRFTEKKHRISMEVAESKGLPKLKYHLLPRTKGFTTTVKYLRGTVAAVYDVTLNFRDNKNPTLLGILHGKQYHADMCVRRFPLEDIPEDENECAAWLHRLYQEKDALQEQYVKDGTFPGQPIQPRRRPWAFLNWLFWVIVLLTPLFNFVFGVFVSGSPVVICSFLLFVGAASFCVRRLIGVTEIGKGSSYGNQEFKKRM
SIO_010081: agpat3
subclass of: SO_0000673
so part of: agpat3
location: join(1286423..1286600,1287400..1287569,1288159..1288320,1289655..1289808,1290770..1290872,1292501..1292576,1295749..1295947,1297914..1298002)
location: region:1286423-1298002:1
so has part: feature:1286423-1286600:1:exon
so has part: feature:1287400-1287569:1:exon
so has part: feature:1288159-1288320:1:exon
so has part: feature:1289655-1289808:1:exon
so has part: feature:1290770-1290872:1:exon
so has part: feature:1292501-1292576:1:exon
so has part: feature:1295749-1295947:1:exon
so has part: feature:1297914-1298002:1:exon

XP_048458683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1286423-1286600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287400-1287569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288159-1288320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289655-1289808:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290770-1290872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1292501-1292576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295749-1295947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1297914-1298002:1:exon

trappc10
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trappc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1352501..1401705
location: region:1352501-1401705:1
so has part: feature:1352501-1401705:1:exon
subclass of: SO_0000010

109935817
type: Gene
SIO_000068: ncbigene

position:1352501:1
position: 1352501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401705:1
position: 1401705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1352501-1401705:1:exon

trappc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: trappc10
product: trafficking protein particle complex subunit 10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603114.1
SIO_010081: trappc10
subclass of: SO_0000673
so part of: trappc10
location: join(1352501..1352584,1356279..1356360,1363092..1363227,1364469..1364665,1364818..1365013,1365868..1365979,1366295..1366542,1369746..1369892,1370929..1371043,1376340..1376416,1376730..1376821,1377621..1377761,1381428..1381540,1381711..1382225,1383294..1383435,1384902..1385060,1385565..1385803,1386602..1386702,1387792..1387918,1396841..1397008,1397354..1397531,1398082..1398276,1400385..1401705)
location: region:1352501-1401705:1
so has part: feature:1352501-1352584:1:exon
so has part: feature:1356279-1356360:1:exon
so has part: feature:1363092-1363227:1:exon
so has part: feature:1364469-1364665:1:exon
so has part: feature:1364818-1365013:1:exon
so has part: feature:1365868-1365979:1:exon
so has part: feature:1366295-1366542:1:exon
so has part: feature:1369746-1369892:1:exon
so has part: feature:1370929-1371043:1:exon
so has part: feature:1376340-1376416:1:exon
so has part: feature:1376730-1376821:1:exon
so has part: feature:1377621-1377761:1:exon
so has part: feature:1381428-1381540:1:exon
so has part: feature:1381711-1382225:1:exon
so has part: feature:1383294-1383435:1:exon
so has part: feature:1384902-1385060:1:exon
so has part: feature:1385565-1385803:1:exon
so has part: feature:1386602-1386702:1:exon
so has part: feature:1387792-1387918:1:exon
so has part: feature:1396841-1397008:1:exon
so has part: feature:1397354-1397531:1:exon
so has part: feature:1398082-1398276:1:exon
so has part: feature:1400385-1401705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1352501-1352584:1:exon

position:1352584:1
position: 1352584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1356279-1356360:1:exon

position:1356279:1
position: 1356279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356360:1
position: 1356360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1363092-1363227:1:exon

position:1363092:1
position: 1363092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1363227:1
position: 1363227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1364469-1364665:1:exon

position:1364469:1
position: 1364469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364665:1
position: 1364665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1364818-1365013:1:exon

position:1364818:1
position: 1364818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365013:1
position: 1365013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1365868-1365979:1:exon

position:1365868:1
position: 1365868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365979:1
position: 1365979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1366295-1366542:1:exon

position:1366295:1
position: 1366295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366542:1
position: 1366542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1369746-1369892:1:exon

position:1369746:1
position: 1369746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369892:1
position: 1369892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1370929-1371043:1:exon

position:1370929:1
position: 1370929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371043:1
position: 1371043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1376340-1376416:1:exon

position:1376340:1
position: 1376340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376416:1
position: 1376416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1376730-1376821:1:exon

position:1376730:1
position: 1376730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376821:1
position: 1376821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1377621-1377761:1:exon

position:1377621:1
position: 1377621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377761:1
position: 1377761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1381428-1381540:1:exon

position:1381428:1
position: 1381428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381540:1
position: 1381540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1381711-1382225:1:exon

position:1381711:1
position: 1381711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382225:1
position: 1382225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1383294-1383435:1:exon

position:1383294:1
position: 1383294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383435:1
position: 1383435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1384902-1385060:1:exon

position:1384902:1
position: 1384902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385060:1
position: 1385060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1385565-1385803:1:exon

position:1385565:1
position: 1385565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385803:1
position: 1385803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1386602-1386702:1:exon

position:1386602:1
position: 1386602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386702:1
position: 1386702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1387792-1387918:1:exon

position:1387792:1
position: 1387792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387918:1
position: 1387918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1396841-1397008:1:exon

position:1396841:1
position: 1396841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397008:1
position: 1397008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1397354-1397531:1:exon

position:1397354:1
position: 1397354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397531:1
position: 1397531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1398082-1398276:1:exon

position:1398082:1
position: 1398082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398276:1
position: 1398276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1400385-1401705:1:exon

position:1400385:1
position: 1400385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trappc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: trappc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 10
translation: MENRPLATCAGDQALFSSVYSILMQQLPREPMEWRRSYGRPPKMIHLEANFVQFKEELIPKEGNRALLTFPFLHLFWTDCCDTEVYKATAKDEITKWQNILKAYSSSDWLIVVVESDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLTDPLKDSSRTQESWNAFFTKLRTLLLMSFTKNLGKFEDEMRTMREKRTEAGWSFCEYFMVQEELAFVFEMLQQFEDALVQYDELDALFTQYVVNYGAGDGANWLTSFCQPVRSWNGLVLRKPIDMEKRELIQKNKATLLDLRSYLFSRQCTLLVFLQRPWEVAQRALELLHNCVQELKLLEVSVPIGALDCWVFLSCLEVLQRIEGCCDQVQLENNYCHTVGLWSYATEKLQSLGYLCGLISEKGPNSEELNRTVDVLAGLGAEHPETANSPQSPYKTLNEALSSVEAFEKHYLELSLTAFDMYKTIGQIRSAQLLGKDLADFYMHKGEPQKASLYLQEALKTYQTEGWTLLTAHTRKQLAECQKQLQQTQNYLQTSSLLASDSNLTDTERVHFCQEILDLAQQPVNGQDDRFVLPMDGFVQLKRLCFNPACAVVHVGGYLDIELTVNSLMPLPMHLDQLSIHLHLTVSKDPSKRSNEFGGRSRNASGIFLFPSEPSGNTFPRNSQPSVELYELYDRSLSDSSLNSSGIICKNMHLLLRRQESSSSLERPSDLPLGDAAHTLRTSNILLQPGANIIHFNTQAKEAGIYTLRQLSASLGIVQFTLPHIYPIIQYEAYSQEPQLKVEPMTDSLLAGISQQVKFTIQTGHYSVKNGDALQLSITDTLPILHSASSTATVSTNTGDKVSEAPLSIQSSGKITSISLPLAAAYHQIEFELRVICHLPSTLPTPPDSEKPSAEIKTIRKGLEKTKVDGPCMTSIEQKITVDCPWSIYSSLVSLTFNIPFNAKHSLLSSGRRKYLQVCVHNLSEIGFQLFDPQLEEVTKYSDLTFVSLNCLKQQHIYSKQAMFFLWELKWSQDPGTSLHCQFSVAFTPLTGQEPGLIKPFTYELKLDNFCTLYDVKAEIFPPLGAEMCKTGTLCNLEVSIVRLSDLTEVDKDESLVDCDGYCTTKLMYEVVDNSSNWAVCGKSSGVISMPVAARATHKVHMEVMPLFAGFLPFPDIKLFKYLPFQPSQSGQMETDNWIENDTLSVDRNLDEQVESSSMRSRGSSHSSSSNEHRGVPMPRLLPFSSGQVFNTSSSMQILVIPSQDDHMLEVNVT
SIO_010081: trappc10
subclass of: SO_0000673
so part of: trappc10
location: join(1352560..1352584,1356279..1356360,1363092..1363227,1364469..1364665,1364818..1365013,1365868..1365979,1366295..1366542,1369746..1369892,1370929..1371043,1376340..1376416,1376730..1376821,1377621..1377761,1381428..1381540,1381711..1382225,1383294..1383435,1384902..1385060,1385565..1385803,1386602..1386702,1387792..1387918,1396841..1397008,1397354..1397531,1398082..1398276,1400385..1400623)
location: region:1352560-1400623:1
so has part: feature:1352560-1352584:1:exon
so has part: feature:1356279-1356360:1:exon
so has part: feature:1363092-1363227:1:exon
so has part: feature:1364469-1364665:1:exon
so has part: feature:1364818-1365013:1:exon
so has part: feature:1365868-1365979:1:exon
so has part: feature:1366295-1366542:1:exon
so has part: feature:1369746-1369892:1:exon
so has part: feature:1370929-1371043:1:exon
so has part: feature:1376340-1376416:1:exon
so has part: feature:1376730-1376821:1:exon
so has part: feature:1377621-1377761:1:exon
so has part: feature:1381428-1381540:1:exon
so has part: feature:1381711-1382225:1:exon
so has part: feature:1383294-1383435:1:exon
so has part: feature:1384902-1385060:1:exon
so has part: feature:1385565-1385803:1:exon
so has part: feature:1386602-1386702:1:exon
so has part: feature:1387792-1387918:1:exon
so has part: feature:1396841-1397008:1:exon
so has part: feature:1397354-1397531:1:exon
so has part: feature:1398082-1398276:1:exon
so has part: feature:1400385-1400623:1:exon

XP_048459071.1
type: Protein
SIO_000068: ncbiprotein

position:1352560:1
position: 1352560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400623:1
position: 1400623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1352560-1352584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1356279-1356360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1363092-1363227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1364469-1364665:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1364818-1365013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365868-1365979:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1366295-1366542:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369746-1369892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1370929-1371043:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376340-1376416:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1376730-1376821:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1377621-1377761:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381428-1381540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1381711-1382225:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1383294-1383435:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1384902-1385060:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1385565-1385803:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1386602-1386702:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1387792-1387918:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396841-1397008:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1397354-1397531:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1398082-1398276:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1400385-1400623:1:exon

pwp2h
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: pwp2h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1403014..1458547
location: region:1403014-1458547:1
so has part: feature:1403014-1458547:1:exon
subclass of: SO_0000010

109920390
type: Gene
SIO_000068: ncbigene

position:1403014:1
position: 1403014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1458547:1
position: 1458547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403014-1458547:1:exon

pwp2h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: pwp2h
product: PWP2 small subunit processome component
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603011.1
SIO_010081: pwp2h
subclass of: SO_0000673
so part of: pwp2h
location: join(1403014..1403091,1436284..1436492,1437083..1437226,1437483..1437553,1444071..1444207,1445343..1445491,1446632..1446779,1447691..1447841,1448565..1448745,1448898..1449045,1450466..1450574,1453266..1453331,1454261..1454479,1455788..1455938,1457180..1457254,1457943..1458547)
location: region:1403014-1458547:1
so has part: feature:1403014-1403091:1:exon
so has part: feature:1436284-1436492:1:exon
so has part: feature:1437083-1437226:1:exon
so has part: feature:1437483-1437553:1:exon
so has part: feature:1444071-1444207:1:exon
so has part: feature:1445343-1445491:1:exon
so has part: feature:1446632-1446779:1:exon
so has part: feature:1447691-1447841:1:exon
so has part: feature:1448565-1448745:1:exon
so has part: feature:1448898-1449045:1:exon
so has part: feature:1450466-1450574:1:exon
so has part: feature:1453266-1453331:1:exon
so has part: feature:1454261-1454479:1:exon
so has part: feature:1455788-1455938:1:exon
so has part: feature:1457180-1457254:1:exon
so has part: feature:1457943-1458547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1403014-1403091:1:exon

position:1403091:1
position: 1403091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1436284-1436492:1:exon

position:1436284:1
position: 1436284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436492:1
position: 1436492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1437083-1437226:1:exon

position:1437083:1
position: 1437083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437226:1
position: 1437226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1437483-1437553:1:exon

position:1437483:1
position: 1437483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437553:1
position: 1437553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1444071-1444207:1:exon

position:1444071:1
position: 1444071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444207:1
position: 1444207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1445343-1445491:1:exon

position:1445343:1
position: 1445343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445491:1
position: 1445491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1446632-1446779:1:exon

position:1446632:1
position: 1446632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446779:1
position: 1446779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1447691-1447841:1:exon

position:1447691:1
position: 1447691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447841:1
position: 1447841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1448565-1448745:1:exon

position:1448565:1
position: 1448565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448745:1
position: 1448745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1448898-1449045:1:exon

position:1448898:1
position: 1448898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449045:1
position: 1449045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1450466-1450574:1:exon

position:1450466:1
position: 1450466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450574:1
position: 1450574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1453266-1453331:1:exon

position:1453266:1
position: 1453266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453331:1
position: 1453331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1454261-1454479:1:exon

position:1454261:1
position: 1454261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454479:1
position: 1454479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1455788-1455938:1:exon

position:1455788:1
position: 1455788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455938:1
position: 1455938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1457180-1457254:1:exon

position:1457180:1
position: 1457180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457254:1
position: 1457254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1457943-1458547:1:exon

position:1457943:1
position: 1457943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pwp2h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: pwp2h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWP2 small subunit processome component
translation: MSSLMEGKCGTSSIERLFSIAIHQWKIYTLSRDATLCVWQCDTEPDGLQRQLPKTKDKTETDQSQEITGQSAEIIRGKAESEQERIGKVKYSRVGKHFFNKEKDFNDLTAAAYHKKTHLLVTGFASGIFHLHELPEFNLIHSLSISDQRIESISVNVSGDWIAFGCPGLGQLLVWEWQSESYVFKQQGHFNNMATLSYSPDAQYIVTGGEDGKVKVWNTSSGFCIVTFTEHTSAVTAVTFNSTGFVVLSASLDGTVRAFDLHRYRNFRTFTSPRPTQFFSLAVDMSGEIVCAGSQDSFEIFVWSMQTGRLLEVLAAHEGPVSNLSFSPSHTLLASASWDKTVKLWDMFDSWKTKETLVLNSDVLDVAFRPDGKELAVVSLDGQITFWDHQNAVQTGSIEGRHDLQMGRKELDKITAKQAAKGRSFSTVCYSADGLSVLAGGHSKFVCIYNVKEQLLVKKFEISCNHSLDAMEEFLDRRKMTEFGSMALIDDGVGDENGVAISLPGVKKGDMSSRHFKPEIRVTCLCFSPTGRSWAATSTEGLLIYSLDGCMVFDPFDLDEEITPSSVRRVLRQKEFTAAIMMSLRLNENKLILEVLETVPHAEIDLVCSTLPLTYVEKILQFVASALETSRHLEFFLTWAQRLLTLHGQKLKARSVVLLPMIQALQRSIRHHFDTVSKLCDWNRYNMRYALALSQQRGMKRPTELAESDEDSGSEGDIEQLMDASD
SIO_010081: pwp2h
subclass of: SO_0000673
so part of: pwp2h
location: join(1403014..1403091,1436284..1436492,1437083..1437226,1437483..1437553,1444071..1444207,1445343..1445491,1446632..1446779,1447691..1447841,1448565..1448745,1448898..1449045,1450466..1450574,1453266..1453331,1454261..1454479,1455788..1455938,1457180..1457254,1457943..1458087)
location: region:1403014-1458087:1
so has part: feature:1403014-1403091:1:exon
so has part: feature:1436284-1436492:1:exon
so has part: feature:1437083-1437226:1:exon
so has part: feature:1437483-1437553:1:exon
so has part: feature:1444071-1444207:1:exon
so has part: feature:1445343-1445491:1:exon
so has part: feature:1446632-1446779:1:exon
so has part: feature:1447691-1447841:1:exon
so has part: feature:1448565-1448745:1:exon
so has part: feature:1448898-1449045:1:exon
so has part: feature:1450466-1450574:1:exon
so has part: feature:1453266-1453331:1:exon
so has part: feature:1454261-1454479:1:exon
so has part: feature:1455788-1455938:1:exon
so has part: feature:1457180-1457254:1:exon
so has part: feature:1457943-1458087:1:exon

XP_048458968.1
type: Protein
SIO_000068: ncbiprotein

position:1458087:1
position: 1458087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403014-1403091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436284-1436492:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437083-1437226:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1437483-1437553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1444071-1444207:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1445343-1445491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1446632-1446779:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1447691-1447841:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448565-1448745:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1448898-1449045:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1450466-1450574:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1453266-1453331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1454261-1454479:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1455788-1455938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1457180-1457254:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1457943-1458087:1:exon

gatd3
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: gatd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1445335..1479596
location: region:1445335-1479596:1
so has part: feature:1445335-1479596:1:exon
subclass of: SO_0000010

109918149
type: Gene
SIO_000068: ncbigene

position:1445335:1
position: 1445335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479596:1
position: 1479596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445335-1479596:1:exon

gatd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gatd3
product: glutamine amidotransferase class 1 domain containing 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602719.1
SIO_010081: gatd3
subclass of: SO_0000673
so part of: gatd3
location: join(1445335..1445342,1463890..1463896,1464496..1464501,1465814..1465818,1473578..1473630,1474113..1474223,1477198..1477317,1477993..1478085,1478651..1478807,1479042..1479596)
location: region:1445335-1479596:1
so has part: feature:1445335-1445342:1:exon
so has part: feature:1463890-1463896:1:exon
so has part: feature:1464496-1464501:1:exon
so has part: feature:1465814-1465818:1:exon
so has part: feature:1473578-1473630:1:exon
so has part: feature:1474113-1474223:1:exon
so has part: feature:1477198-1477317:1:exon
so has part: feature:1477993-1478085:1:exon
so has part: feature:1478651-1478807:1:exon
so has part: feature:1479042-1479596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1445335-1445342:1:exon

position:1445342:1
position: 1445342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1463890-1463896:1:exon

position:1463890:1
position: 1463890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463896:1
position: 1463896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1464496-1464501:1:exon

position:1464496:1
position: 1464496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464501:1
position: 1464501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1465814-1465818:1:exon

position:1465814:1
position: 1465814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465818:1
position: 1465818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1473578-1473630:1:exon

position:1473578:1
position: 1473578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473630:1
position: 1473630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1474113-1474223:1:exon

position:1474113:1
position: 1474113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474223:1
position: 1474223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1477198-1477317:1:exon

position:1477198:1
position: 1477198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477317:1
position: 1477317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1477993-1478085:1:exon

position:1477993:1
position: 1477993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478085:1
position: 1478085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1478651-1478807:1:exon

position:1478651:1
position: 1478651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478807:1
position: 1478807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1479042-1479596:1:exon

position:1479042:1
position: 1479042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gatd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gatd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial
translation: MHVVDHVKGEPAGDSRNVLAESARIARGKIMDLAQLNAQDHDAVIFPGGFGVAKNLSTFAKDGKDCKVIPDIERVLNEFHKARKPIGLCCIAPVLAAKVLPGVEVTVGHEDEEGGKWPYAGTAAAINAMGGKHTVHDVNSAHVDHQNWVVTTPAFMCETKLHHIFDGIGEMVQQVLKLTGK
SIO_010081: gatd3
subclass of: SO_0000673
so part of: gatd3
location: join(1474177..1474223,1477198..1477317,1477993..1478085,1478651..1478807,1479042..1479170)
location: region:1474177-1479170:1
so has part: feature:1474177-1474223:1:exon
so has part: feature:1477198-1477317:1:exon
so has part: feature:1477993-1478085:1:exon
so has part: feature:1478651-1478807:1:exon
so has part: feature:1479042-1479170:1:exon

XP_048458676.1
type: Protein
SIO_000068: ncbiprotein

position:1474177:1
position: 1474177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479170:1
position: 1479170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1474177-1474223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1477198-1477317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1477993-1478085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1478651-1478807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479042-1479170:1:exon

trnat-ugu
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: trnat-ugu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1531517..1531588)
location: region:1531517-1531588:-1
so has part: feature:1531517-1531588:-1:exon
subclass of: SO_0000663

125484491
type: Gene
SIO_000068: ncbigene

position:1531517:-1
position: 1531517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531588:-1
position: 1531588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531517-1531588:-1:exon

trnat-ugu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 259920
gene: trnat-ugu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1531554..1531556),aa:Thr, seq:tgt)
SIO_010081: trnat-ugu
subclass of: SO_0000673
so part of: trnat-ugu
location: complement(1531517..1531588)
location: region:1531517-1531588:-1
so has part: feature:1531517-1531588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1531517-1531588:-1:exon

LOC125484445
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484445
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2663191..2713103)
location: region:2663191-2713103:-1
so has part: feature:2663191-2713103:-1:exon
subclass of: SO_0000011

125484445
type: Gene
SIO_000068: ncbigene

position:2663191:-1
position: 2663191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2713103:-1
position: 2713103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2663191-2713103:-1:exon

LOC125484445
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484445
product: uncharacterized LOC125484445
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 75% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007263276.1
SIO_010081: LOC125484445
subclass of: SO_0000673
so part of: LOC125484445
location: complement(join(2663191..2665372,2675558..2675643,2713022..2713103))
location: region:2663191-2713103:-1
so has part: feature:2713022-2713103:-1:exon
so has part: feature:2675558-2675643:-1:exon
so has part: feature:2663191-2665372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2713022-2713103:-1:exon

position:2713022:-1
position: 2713022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2675558-2675643:-1:exon

position:2675558:-1
position: 2675558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2675643:-1
position: 2675643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2663191-2665372:-1:exon

position:2665372:-1
position: 2665372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109916713
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109916713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3190307..3715782
location: region:3190307-3715782:1
so has part: feature:3190307-3715782:1:exon
subclass of: SO_0000010

109916713
type: Gene
SIO_000068: ncbigene

position:3190307:1
position: 3190307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3715782:1
position: 3715782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3190307-3715782:1:exon

LOC109916713
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109916713
product: 1,4-alpha-glucan-branching enzyme-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602999.1
SIO_010081: LOC109916713
subclass of: SO_0000673
so part of: LOC109916713
location: join(3190307..3190543,3246651..3246820,3301832..3301947,3401576..3401701,3472180..3472228,3475739..3475745,3476560..3476569,3477696..3477744,3477999..3478022,3505366..3505456,3508466..3508675,3528735..3528850,3532211..3532338,3540798..3540896,3573831..3573941,3579009..3579180,3634178..3634362,3648286..3648416,3688279..3688396,3705377..3705427,3708947..3708991,3714817..3715782)
location: region:3190307-3715782:1
so has part: feature:3190307-3190543:1:exon
so has part: feature:3246651-3246820:1:exon
so has part: feature:3301832-3301947:1:exon
so has part: feature:3401576-3401701:1:exon
so has part: feature:3472180-3472228:1:exon
so has part: feature:3475739-3475745:1:exon
so has part: feature:3476560-3476569:1:exon
so has part: feature:3477696-3477744:1:exon
so has part: feature:3477999-3478022:1:exon
so has part: feature:3505366-3505456:1:exon
so has part: feature:3508466-3508675:1:exon
so has part: feature:3528735-3528850:1:exon
so has part: feature:3532211-3532338:1:exon
so has part: feature:3540798-3540896:1:exon
so has part: feature:3573831-3573941:1:exon
so has part: feature:3579009-3579180:1:exon
so has part: feature:3634178-3634362:1:exon
so has part: feature:3648286-3648416:1:exon
so has part: feature:3688279-3688396:1:exon
so has part: feature:3705377-3705427:1:exon
so has part: feature:3708947-3708991:1:exon
so has part: feature:3714817-3715782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3190307-3190543:1:exon

position:3190543:1
position: 3190543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3246651-3246820:1:exon

position:3246651:1
position: 3246651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246820:1
position: 3246820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3301832-3301947:1:exon

position:3301832:1
position: 3301832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3301947:1
position: 3301947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3401576-3401701:1:exon

position:3401576:1
position: 3401576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3401701:1
position: 3401701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3472180-3472228:1:exon

position:3472180:1
position: 3472180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3472228:1
position: 3472228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3475739-3475745:1:exon

position:3475739:1
position: 3475739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3475745:1
position: 3475745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3476560-3476569:1:exon

position:3476560:1
position: 3476560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3476569:1
position: 3476569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3477696-3477744:1:exon

position:3477696:1
position: 3477696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3477744:1
position: 3477744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3477999-3478022:1:exon

position:3477999:1
position: 3477999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3478022:1
position: 3478022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3505366-3505456:1:exon

position:3505366:1
position: 3505366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3505456:1
position: 3505456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3508466-3508675:1:exon

position:3508466:1
position: 3508466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3508675:1
position: 3508675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3528735-3528850:1:exon

position:3528735:1
position: 3528735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3528850:1
position: 3528850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3532211-3532338:1:exon

position:3532211:1
position: 3532211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3532338:1
position: 3532338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3540798-3540896:1:exon

position:3540798:1
position: 3540798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3540896:1
position: 3540896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3573831-3573941:1:exon

position:3573831:1
position: 3573831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3573941:1
position: 3573941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3579009-3579180:1:exon

position:3579009:1
position: 3579009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3579180:1
position: 3579180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3634178-3634362:1:exon

position:3634178:1
position: 3634178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3634362:1
position: 3634362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3648286-3648416:1:exon

position:3648286:1
position: 3648286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3648416:1
position: 3648416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3688279-3688396:1:exon

position:3688279:1
position: 3688279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3688396:1
position: 3688396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3705377-3705427:1:exon

position:3705377:1
position: 3705377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3705427:1
position: 3705427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3708947-3708991:1:exon

position:3708947:1
position: 3708947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3708991:1
position: 3708991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3714817-3715782:1:exon

position:3714817:1
position: 3714817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109916713
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109916713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1,4-alpha-glucan-branching enzyme-like
translation: MAVLAAALPAEAQLGGLLDLDPHLEPYSKDLRRRYDKFRSLARSIEENEGSLDQFSRSYESFGVNRLADGGIYCKEWAPGAKSVSLVGEFNGWKSSSHRYKMLPFGKWELHIPPRADGSSPIPHGSKLKVAIECTTGQQLYRISPWARYVIREQNASTYDWVHWDPPERYEIHSSPYPQVSESLRNYESHIGLMLPDLMLSFYSNFCFSGFPSLKDISYNCIQLMAIMEHAYYASFGYQVTSFFAASSRFGTPDELKELVDTAHSMGLFVLLDVVHSHASKNTEDGLNLFDGTDSCFFHSGARGTHLLWDSRLFNYSNWEVLRFLLSNLRWWVEEYYFDGFRFDGVTSMLYHHHGISTVFSGNYSEYFGLHVDEDALVYLMLSNHMLHSFYPDFITVAEDVSGMPTLCRPEIEGGGGFDFRLAMAIPDKWIQILKELKDEDWNMGNIVYTLTNRRYGEKCIAYAESHDQALVGDKTLAFWLMDAEMYTNMSVLTPFTMVVDRGMQLHKMIRLITHALGGEGYLNFIGNEFGHPEWLDFPRIGNNESYHYARRQFNLLDNHHLRYQQLNAFDADMNKLEDKYGWLAASPAYVSEKHEENKVIAFERANLLFVFNFNPDKSFPDYRVGIDQPGKYKIVLDTDSTDYGGHGRLNHNTEFFTDVQIQNNRPNSMLFRSGDNDFSLRRSHAAELVGYGTVHCCENSLKVYIPSRTAIVLASMDINK
SIO_010081: LOC109916713
subclass of: SO_0000673
so part of: LOC109916713
location: join(3190443..3190543,3246651..3246820,3301832..3301947,3401576..3401701,3472180..3472228,3475739..3475745,3476560..3476569,3477696..3477744,3477999..3478022,3505366..3505456,3508466..3508675,3528735..3528850,3532211..3532338,3540798..3540896,3573831..3573941,3579009..3579180,3634178..3634362,3648286..3648416,3688279..3688396,3705377..3705427,3708947..3708991,3714817..3714873)
location: region:3190443-3714873:1
so has part: feature:3190443-3190543:1:exon
so has part: feature:3246651-3246820:1:exon
so has part: feature:3301832-3301947:1:exon
so has part: feature:3401576-3401701:1:exon
so has part: feature:3472180-3472228:1:exon
so has part: feature:3475739-3475745:1:exon
so has part: feature:3476560-3476569:1:exon
so has part: feature:3477696-3477744:1:exon
so has part: feature:3477999-3478022:1:exon
so has part: feature:3505366-3505456:1:exon
so has part: feature:3508466-3508675:1:exon
so has part: feature:3528735-3528850:1:exon
so has part: feature:3532211-3532338:1:exon
so has part: feature:3540798-3540896:1:exon
so has part: feature:3573831-3573941:1:exon
so has part: feature:3579009-3579180:1:exon
so has part: feature:3634178-3634362:1:exon
so has part: feature:3648286-3648416:1:exon
so has part: feature:3688279-3688396:1:exon
so has part: feature:3705377-3705427:1:exon
so has part: feature:3708947-3708991:1:exon
so has part: feature:3714817-3714873:1:exon

XP_048458956.1
type: Protein
SIO_000068: ncbiprotein

position:3190443:1
position: 3190443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3714873:1
position: 3714873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3190443-3190543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246651-3246820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3301832-3301947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3401576-3401701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3472180-3472228:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3475739-3475745:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3476560-3476569:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3477696-3477744:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3477999-3478022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3505366-3505456:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3508466-3508675:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3528735-3528850:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3532211-3532338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3540798-3540896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3573831-3573941:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3579009-3579180:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3634178-3634362:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3648286-3648416:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3688279-3688396:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3705377-3705427:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3708947-3708991:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3714817-3714873:1:exon

LOC125484403
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4234965..4293575
location: region:4234965-4293575:1
so has part: feature:4234965-4293575:1:exon
subclass of: SO_0000010

125484403
type: Gene
SIO_000068: ncbigene

position:4234965:1
position: 4234965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4293575:1
position: 4293575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4234965-4293575:1:exon

LOC125484403
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484403
product: roundabout homolog 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048603015.1
SIO_010081: LOC125484403
subclass of: SO_0000673
so part of: LOC125484403
location: join(4234965..4235881,4293199..4293575)
location: region:4234965-4293575:1
so has part: feature:4234965-4235881:1:exon
so has part: feature:4293199-4293575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4234965-4235881:1:exon

position:4235881:1
position: 4235881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4293199-4293575:1:exon

position:4293199:1
position: 4293199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484403
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2-like
translation: MSPVIMTTELLRFCLAVGLMCMTSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPNPTVEWYKDGERVETDKDDARSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVASTSQASGEAGALWGRW
SIO_010081: LOC125484403
subclass of: SO_0000673
so part of: LOC125484403
location: join(4235809..4235881,4293199..4293575)
location: region:4235809-4293575:1
so has part: feature:4235809-4235881:1:exon
so has part: feature:4293199-4293575:1:exon

XP_048458972.1
type: Protein
SIO_000068: ncbiprotein

position:4235809:1
position: 4235809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4235809-4235881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4293199-4293575:1:exon

LOC109913758
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109913758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4463631..4521808
location: region:4463631-4521808:1
so has part: feature:4463631-4521808:1:exon
subclass of: SO_0000010

109913758
type: Gene
SIO_000068: ncbigene

position:4463631:1
position: 4463631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4521808:1
position: 4521808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4463631-4521808:1:exon

LOC109913758
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109913758
product: roundabout homolog 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048603016.1
SIO_010081: LOC109913758
subclass of: SO_0000673
so part of: LOC109913758
location: join(4463631..4463746,4465032..4465170,4468327..4468454,4479623..4479634,4484665..4484789,4485415..4485586,4488968..4489173,4491020..4491101,4493436..4493604,4495724..4495890,4497958..4498079,4499559..4499793,4501449..4501570,4506658..4506829,4508184..4508387,4521741..4521808)
location: region:4463631-4521808:1
so has part: feature:4463631-4463746:1:exon
so has part: feature:4465032-4465170:1:exon
so has part: feature:4468327-4468454:1:exon
so has part: feature:4479623-4479634:1:exon
so has part: feature:4484665-4484789:1:exon
so has part: feature:4485415-4485586:1:exon
so has part: feature:4488968-4489173:1:exon
so has part: feature:4491020-4491101:1:exon
so has part: feature:4493436-4493604:1:exon
so has part: feature:4495724-4495890:1:exon
so has part: feature:4497958-4498079:1:exon
so has part: feature:4499559-4499793:1:exon
so has part: feature:4501449-4501570:1:exon
so has part: feature:4506658-4506829:1:exon
so has part: feature:4508184-4508387:1:exon
so has part: feature:4521741-4521808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4463631-4463746:1:exon

position:4463746:1
position: 4463746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4465032-4465170:1:exon

position:4465032:1
position: 4465032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4465170:1
position: 4465170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4468327-4468454:1:exon

position:4468327:1
position: 4468327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4468454:1
position: 4468454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4479623-4479634:1:exon

position:4479623:1
position: 4479623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4479634:1
position: 4479634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4484665-4484789:1:exon

position:4484665:1
position: 4484665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4484789:1
position: 4484789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4485415-4485586:1:exon

position:4485415:1
position: 4485415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4485586:1
position: 4485586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4488968-4489173:1:exon

position:4488968:1
position: 4488968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4489173:1
position: 4489173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4491020-4491101:1:exon

position:4491020:1
position: 4491020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4491101:1
position: 4491101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4493436-4493604:1:exon

position:4493436:1
position: 4493436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493604:1
position: 4493604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4495724-4495890:1:exon

position:4495724:1
position: 4495724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4495890:1
position: 4495890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4497958-4498079:1:exon

position:4497958:1
position: 4497958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4498079:1
position: 4498079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4499559-4499793:1:exon

position:4499559:1
position: 4499559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4499793:1
position: 4499793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4501449-4501570:1:exon

position:4501449:1
position: 4501449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4501570:1
position: 4501570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4506658-4506829:1:exon

position:4506658:1
position: 4506658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4506829:1
position: 4506829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4508184-4508387:1:exon

position:4508184:1
position: 4508184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4508387:1
position: 4508387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4521741-4521808:1:exon

position:4521741:1
position: 4521741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109913758
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109913758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1-like
translation: MITNTRKSDSGKYVCVGTNMVGERESEVAELTVLERPSFVKKPSSQVLLVDETVEFKCEARGDPTPTVHWRKEDGLLPKSRSEIQRGNTLVIRHVTAADVGTYTCVAENMVGKTKASVTLTVHVGSVAPPQFVVKPRDQMVAVGRTVTFPCEATGSPQPAIFWQREGSQNLLFSYQPPEPSSRFSVSQVGDLTITNVQRSDVGYYSCQALNVAGSVIIKVFLEVTDVISDRPPPVIRQGPINQTVAVDSTVALGCLASGTPPPTILWRKDGILVSTHDSRIKQQETGALQIRYAKLGDSGVYTCIASTPSGEATWSARIDVQEFGTPVLPPRLPDPNLIPGTPSKPEVRNVSKNGVTLIWKPNMNSGATPTSYIIEAFSHAAGSSWQTVADRVKTDTYAIKNLRSNAVYLFLIRAVNAYGLSDPSPISDPVKTQDVPPTGQGVDHRQVQRELGEVIVHLHNPIILSSSSIQIQWTVDQQSQYIQGYRILYRPSVMDKWSESDWSVFEVRSATDRSAVLPKLRKGMGYDIKVRPFFNEFQGADSDVKYAKTMEEVPSAPPQSVTVTLNDGNGTGIVIAWQPPPEDSFNGELQEYKVWCLGNESRYHINRTVVSTALSVVIPSLTPGVRYRVEVAASNRAGHGVKSEAQYIQLDSFGRLTPEQSDDQVSLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRSGITSSYAGMRKVGHRPFSTKWLALDAHEEVGIP
SIO_010081: LOC109913758
subclass of: SO_0000673
so part of: LOC109913758
location: join(4463644..4463746,4465032..4465170,4468327..4468454,4479623..4479634,4484665..4484789,4485415..4485586,4488968..4489173,4491020..4491101,4493436..4493604,4495724..4495890,4497958..4498079,4499559..4499793,4501449..4501570,4506658..4506829,4508184..4508387,4521741..4521808)
location: region:4463644-4521808:1
so has part: feature:4463644-4463746:1:exon
so has part: feature:4465032-4465170:1:exon
so has part: feature:4468327-4468454:1:exon
so has part: feature:4479623-4479634:1:exon
so has part: feature:4484665-4484789:1:exon
so has part: feature:4485415-4485586:1:exon
so has part: feature:4488968-4489173:1:exon
so has part: feature:4491020-4491101:1:exon
so has part: feature:4493436-4493604:1:exon
so has part: feature:4495724-4495890:1:exon
so has part: feature:4497958-4498079:1:exon
so has part: feature:4499559-4499793:1:exon
so has part: feature:4501449-4501570:1:exon
so has part: feature:4506658-4506829:1:exon
so has part: feature:4508184-4508387:1:exon
so has part: feature:4521741-4521808:1:exon

XP_048458973.1
type: Protein
SIO_000068: ncbiprotein

position:4463644:1
position: 4463644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4463644-4463746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4465032-4465170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4468327-4468454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4479623-4479634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4484665-4484789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4485415-4485586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4488968-4489173:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4491020-4491101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4493436-4493604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4495724-4495890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4497958-4498079:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4499559-4499793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4501449-4501570:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4506658-4506829:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4508184-4508387:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4521741-4521808:1:exon

robo2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: robo2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4607401..4808230)
location: region:4607401-4808230:-1
so has part: feature:4607401-4808230:-1:exon
subclass of: SO_0000010

109919741
type: Gene
SIO_000068: ncbigene

position:4607401:-1
position: 4607401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4808230:-1
position: 4808230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4607401-4808230:-1:exon

robo2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: robo2
product: roundabout, axon guidance receptor, homolog 2 (Drosophila)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048603017.1
SIO_010081: robo2
subclass of: SO_0000673
so part of: robo2
location: complement(join(4607401..4608719,4611810..4612034,4615497..4615709,4628207..4628383,4637117..4637299,4651094..4651305,4655161..4655421,4665488..4665644,4690401..4690667,4693517..4693662,4704696..4704738,4713164..4713355,4715492..4715663,4716481..4716605,4730025..4730256,4732238..4732359,4743099..4743265,4749948..4750116,4751423..4751504,4756851..4757056,4778415..4778586,4789564..4789688,4799733..4799744,4807688..4807815,4808112..4808230))
location: region:4607401-4808230:-1
so has part: feature:4808112-4808230:-1:exon
so has part: feature:4807688-4807815:-1:exon
so has part: feature:4799733-4799744:-1:exon
so has part: feature:4789564-4789688:-1:exon
so has part: feature:4778415-4778586:-1:exon
so has part: feature:4756851-4757056:-1:exon
so has part: feature:4751423-4751504:-1:exon
so has part: feature:4749948-4750116:-1:exon
so has part: feature:4743099-4743265:-1:exon
so has part: feature:4732238-4732359:-1:exon
so has part: feature:4730025-4730256:-1:exon
so has part: feature:4716481-4716605:-1:exon
so has part: feature:4715492-4715663:-1:exon
so has part: feature:4713164-4713355:-1:exon
so has part: feature:4704696-4704738:-1:exon
so has part: feature:4693517-4693662:-1:exon
so has part: feature:4690401-4690667:-1:exon
so has part: feature:4665488-4665644:-1:exon
so has part: feature:4655161-4655421:-1:exon
so has part: feature:4651094-4651305:-1:exon
so has part: feature:4637117-4637299:-1:exon
so has part: feature:4628207-4628383:-1:exon
so has part: feature:4615497-4615709:-1:exon
so has part: feature:4611810-4612034:-1:exon
so has part: feature:4607401-4608719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4808112-4808230:-1:exon

position:4808112:-1
position: 4808112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4807688-4807815:-1:exon

position:4807688:-1
position: 4807688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4807815:-1
position: 4807815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4799733-4799744:-1:exon

position:4799733:-1
position: 4799733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4799744:-1
position: 4799744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4789564-4789688:-1:exon

position:4789564:-1
position: 4789564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4789688:-1
position: 4789688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4778415-4778586:-1:exon

position:4778415:-1
position: 4778415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4778586:-1
position: 4778586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4756851-4757056:-1:exon

position:4756851:-1
position: 4756851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4757056:-1
position: 4757056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4751423-4751504:-1:exon

position:4751423:-1
position: 4751423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4751504:-1
position: 4751504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4749948-4750116:-1:exon

position:4749948:-1
position: 4749948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4750116:-1
position: 4750116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4743099-4743265:-1:exon

position:4743099:-1
position: 4743099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4743265:-1
position: 4743265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4732238-4732359:-1:exon

position:4732238:-1
position: 4732238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4732359:-1
position: 4732359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4730025-4730256:-1:exon

position:4730025:-1
position: 4730025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4730256:-1
position: 4730256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4716481-4716605:-1:exon

position:4716481:-1
position: 4716481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4716605:-1
position: 4716605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4715492-4715663:-1:exon

position:4715492:-1
position: 4715492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4715663:-1
position: 4715663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4713164-4713355:-1:exon

position:4713164:-1
position: 4713164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4713355:-1
position: 4713355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4704696-4704738:-1:exon

position:4704696:-1
position: 4704696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4704738:-1
position: 4704738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4693517-4693662:-1:exon

position:4693517:-1
position: 4693517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4693662:-1
position: 4693662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4690401-4690667:-1:exon

position:4690401:-1
position: 4690401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4690667:-1
position: 4690667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4665488-4665644:-1:exon

position:4665488:-1
position: 4665488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4665644:-1
position: 4665644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4655161-4655421:-1:exon

position:4655161:-1
position: 4655161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4655421:-1
position: 4655421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4651094-4651305:-1:exon

position:4651094:-1
position: 4651094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4651305:-1
position: 4651305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4637117-4637299:-1:exon

position:4637117:-1
position: 4637117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4637299:-1
position: 4637299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4628207-4628383:-1:exon

position:4628207:-1
position: 4628207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4628383:-1
position: 4628383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4615497-4615709:-1:exon

position:4615497:-1
position: 4615497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4615709:-1
position: 4615709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4611810-4612034:-1:exon

position:4611810:-1
position: 4611810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4612034:-1
position: 4612034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4607401-4608719:-1:exon

position:4608719:-1
position: 4608719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

robo2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: robo2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2
translation: MEKQKKPIQPIASALPFNGIWLICGQVFVVGLEPTTFDSEYDIKEDNTLRIKRVSNGDEGTFTCVGENRVGMVEATATLTVRAHPVAAPQFVVRPRDQIVAQGRTITFPCETKGNPQPAVFWQKEGSQNLLFPNQPPQPSSRFAVSSTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIIRQGPANQTLGVDGTTLLKCQATGDPIPTISWLKDGVSLLGKDPRMSLQELGSLQIKNVRVTDSGIYTCVATSSSGETSWSAFLEVRESGAVTVNVKMDMDALPGSPSKPQVADVTKSTVTLSWLAGSHSGSSPVTSYVIEAFSQSVSNSWQTVAENVKDTLHTVRGLRPNTIYLFMVRAVNSQGVSDPSQMSEPVRTQDISPPAQGVDHRQVQRELGEVIVHLHNPLVLTPSSIQVTWTVERQSQFIQGYRVMFRQVSGLPSPSSWQVMEVKVPTERSAVLNNLKKGITYEMKVRPYFNEFQGIDSESKTARTTEEAPSAPPQSVTVMMVGNHNSTSISVSWDPPPAEQQNGIIQEYKIWCLGNATRFHINKTVDAAIRSVVIGGLLPGVQYRVQVAASTGAGVGVKSEPQLIIIGSRGDDIFMTGPGSNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRVDGGIMSNGSRPGLLNPGETGYPWLADSWPTTSLPVNGGSNGPSDIGDLGGMGNFNQAAAGQGEKSGTMLSDSAIYSSIDVTTKTSFNSPGQVTQTTPYATTQLLHSSSIQELAVDLPEPQWKASIQPKPDLTSCGYSLPDQSKFNNGGKGGKKKKNKSSIKPHKNASSNWSNVPLPPPPVQPLPGTELDHYIMDHHENGYDSDGWCPPPPVKSYLHQGMEDELEEEEDRVPTPPVRGITSSPAISFGQQSTATLTPSPREEMQPMLQAHLDEISRAYHFDISRQAWQMQGSSLPPQAPALPLGYISGTLISDIETDLPDEDEDNEDEEEALELARPLRGIAHTPGSSIDNLDSSVTGSMVNGWGSASEEERNMSSQRSSAASSSSNSIFTDGDFAQALATAADRAGFKMEGTSLMRTGKGYSSSQRLQPSSPFSSNGSMGAAHNPCQRSRPPKKHKTAGGRVEQPSAPHRREAAVDDLPPPPDPPPCQGSKLQSGQAPKGTGMVDSLEKQQLPSLEDNMEHLAKTSVDHGYQEDSRSKLLQKPTLGSDEMLIPYSKPSFPSPGHLSGHSSSGTASSKGSTGPRKGVPSRGAPAIASHQRNISDLPDVGYMGSCGQGQFLGDV
SIO_010081: robo2
subclass of: SO_0000673
so part of: robo2
location: complement(join(4608718..4608719,4611810..4612034,4615497..4615709,4628207..4628383,4637117..4637299,4651094..4651305,4655161..4655421,4665488..4665644,4690401..4690667,4693517..4693662,4704696..4704738,4713164..4713355,4715492..4715663,4716481..4716605,4730025..4730256,4732238..4732359,4743099..4743265,4749948..4750116,4751423..4751504,4756851..4757056,4778415..4778586,4789564..4789688,4799733..4799744,4807688..4807815,4808112..4808230))
location: region:4608718-4808230:-1
so has part: feature:4808112-4808230:-1:exon
so has part: feature:4807688-4807815:-1:exon
so has part: feature:4799733-4799744:-1:exon
so has part: feature:4789564-4789688:-1:exon
so has part: feature:4778415-4778586:-1:exon
so has part: feature:4756851-4757056:-1:exon
so has part: feature:4751423-4751504:-1:exon
so has part: feature:4749948-4750116:-1:exon
so has part: feature:4743099-4743265:-1:exon
so has part: feature:4732238-4732359:-1:exon
so has part: feature:4730025-4730256:-1:exon
so has part: feature:4716481-4716605:-1:exon
so has part: feature:4715492-4715663:-1:exon
so has part: feature:4713164-4713355:-1:exon
so has part: feature:4704696-4704738:-1:exon
so has part: feature:4693517-4693662:-1:exon
so has part: feature:4690401-4690667:-1:exon
so has part: feature:4665488-4665644:-1:exon
so has part: feature:4655161-4655421:-1:exon
so has part: feature:4651094-4651305:-1:exon
so has part: feature:4637117-4637299:-1:exon
so has part: feature:4628207-4628383:-1:exon
so has part: feature:4615497-4615709:-1:exon
so has part: feature:4611810-4612034:-1:exon
so has part: feature:4608718-4608719:-1:exon

XP_048458974.1
type: Protein
SIO_000068: ncbiprotein

position:4608718:-1
position: 4608718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4808112-4808230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4807688-4807815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4799733-4799744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4789564-4789688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4778415-4778586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4756851-4757056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4751423-4751504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4749948-4750116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4743099-4743265:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4732238-4732359:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4730025-4730256:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4716481-4716605:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4715492-4715663:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4713164-4713355:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4704696-4704738:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4693517-4693662:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4690401-4690667:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4665488-4665644:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4655161-4655421:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4651094-4651305:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4637117-4637299:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4628207-4628383:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4615497-4615709:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4611810-4612034:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4608718-4608719:-1:exon

LOC125484366
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5066016..5087904)
location: region:5066016-5087904:-1
so has part: feature:5066016-5087904:-1:exon
subclass of: SO_0000011

125484366
type: Gene
SIO_000068: ncbigene

position:5066016:-1
position: 5066016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5087904:-1
position: 5087904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5066016-5087904:-1:exon

LOC125484366
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484366
product: uncharacterized LOC125484366
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263183.1
SIO_010081: LOC125484366
subclass of: SO_0000673
so part of: LOC125484366
location: complement(join(5066016..5066121,5087638..5087904))
location: region:5066016-5087904:-1
so has part: feature:5087638-5087904:-1:exon
so has part: feature:5066016-5066121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5087638-5087904:-1:exon

position:5087638:-1
position: 5087638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5066016-5066121:-1:exon

position:5066121:-1
position: 5066121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109936230
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6051230..6084637)
location: region:6051230-6084637:-1
so has part: feature:6051230-6084637:-1:exon
subclass of: SO_0000010

109936230
type: Gene
SIO_000068: ncbigene

position:6051230:-1
position: 6051230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6084637:-1
position: 6084637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6051230-6084637:-1:exon

LOC109936230
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936230
product: lipase member H-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020534846.2
SIO_010081: LOC109936230
subclass of: SO_0000673
so part of: LOC109936230
location: complement(join(6051230..6051512,6052331..6052504,6060888..6060999,6063391..6063480,6065428..6065583,6067765..6067854,6070400..6070501,6074822..6074930,6079861..6080234,6084430..6084637))
location: region:6051230-6084637:-1
so has part: feature:6084430-6084637:-1:exon
so has part: feature:6079861-6080234:-1:exon
so has part: feature:6074822-6074930:-1:exon
so has part: feature:6070400-6070501:-1:exon
so has part: feature:6067765-6067854:-1:exon
so has part: feature:6065428-6065583:-1:exon
so has part: feature:6063391-6063480:-1:exon
so has part: feature:6060888-6060999:-1:exon
so has part: feature:6052331-6052504:-1:exon
so has part: feature:6051230-6051512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6084430-6084637:-1:exon

position:6084430:-1
position: 6084430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6079861-6080234:-1:exon

position:6079861:-1
position: 6079861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6080234:-1
position: 6080234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6074822-6074930:-1:exon

position:6074822:-1
position: 6074822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6074930:-1
position: 6074930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6070400-6070501:-1:exon

position:6070400:-1
position: 6070400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6070501:-1
position: 6070501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6067765-6067854:-1:exon

position:6067765:-1
position: 6067765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6067854:-1
position: 6067854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6065428-6065583:-1:exon

position:6065428:-1
position: 6065428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6065583:-1
position: 6065583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6063391-6063480:-1:exon

position:6063391:-1
position: 6063391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6063480:-1
position: 6063480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6060888-6060999:-1:exon

position:6060888:-1
position: 6060888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6060999:-1
position: 6060999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6052331-6052504:-1:exon

position:6052331:-1
position: 6052331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6052504:-1
position: 6052504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6051230-6051512:-1:exon

position:6051512:-1
position: 6051512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109936230
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936230
product: lipase member H-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603001.1
SIO_010081: LOC109936230
subclass of: SO_0000673
so part of: LOC109936230
location: complement(join(6051230..6051512,6052331..6052504,6060888..6060999,6063391..6063480,6065428..6065478,6067765..6067854,6070400..6070501,6074822..6074930,6079861..6080279,6084430..6084637))
location: region:6051230-6084637:-1
so has part: feature:6084430-6084637:-1:exon
so has part: feature:6079861-6080279:-1:exon
so has part: feature:6074822-6074930:-1:exon
so has part: feature:6070400-6070501:-1:exon
so has part: feature:6067765-6067854:-1:exon
so has part: feature:6065428-6065478:-1:exon
so has part: feature:6063391-6063480:-1:exon
so has part: feature:6060888-6060999:-1:exon
so has part: feature:6052331-6052504:-1:exon
so has part: feature:6051230-6051512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6084430-6084637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6079861-6080279:-1:exon

position:6080279:-1
position: 6080279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6074822-6074930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6070400-6070501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6067765-6067854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6065428-6065478:-1:exon

position:6065478:-1
position: 6065478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6063391-6063480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6060888-6060999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6052331-6052504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6051230-6051512:-1:exon

LOC109936230
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936230
product: lipase member H-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603000.1
SIO_010081: LOC109936230
subclass of: SO_0000673
so part of: LOC109936230
location: complement(join(6051230..6051512,6052331..6052504,6060888..6060999,6063391..6063480,6065428..6065583,6067765..6067854,6070400..6070501,6074822..6074930,6079861..6080279,6084430..6084637))
location: region:6051230-6084637:-1
so has part: feature:6084430-6084637:-1:exon
so has part: feature:6079861-6080279:-1:exon
so has part: feature:6074822-6074930:-1:exon
so has part: feature:6070400-6070501:-1:exon
so has part: feature:6067765-6067854:-1:exon
so has part: feature:6065428-6065583:-1:exon
so has part: feature:6063391-6063480:-1:exon
so has part: feature:6060888-6060999:-1:exon
so has part: feature:6052331-6052504:-1:exon
so has part: feature:6051230-6051512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6084430-6084637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6079861-6080279:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6074822-6074930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6070400-6070501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6067765-6067854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6065428-6065583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6063391-6063480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6060888-6060999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6052331-6052504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6051230-6051512:-1:exon

LOC109936230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member H-like isoform X2
translation: MFLISFAVRFFRFTAPGIMFHWLLFCLCATVIPPVVSQERKCHSFTKLPVTDTIIGTNLVVRLLLYTGKNSSCATLINATHTSLLDVNKKTIFLIHGYRPFGSIPNWLTRMTQKLQMVDDINLIIVDWNRGATTINYSVAVANTKRVAEILGDVIDNILKIGGSLDLIHMIGVSLGAHISGFVGSRFSGQIGRITGLDPAGPLFRGKGVEDRLDPADAQLVDVLHTDFDALGYEEFLGNIDYYANGGTDQPGCPATIIAGKRYMVCDHQRSVYLYISSMNSTCNITVYPCTSYEEFLDARCTEHDKTYPIFGYHIDKWKNNHLMKFPNKVFFQTSTEDPFCMYYYLLDIVTWNKNTRKGYITVGMTGQNGVIVKAEANQYAKSFEKFKEVTLLVSVNKDVGNISSISLTFSSAYLVEPKLKLGILQMKLRSLTYPKRPHLCRYDIALQKDLEEEFQLIECQAPEI
SIO_010081: LOC109936230
subclass of: SO_0000673
so part of: LOC109936230
location: complement(join(6051425..6051512,6052331..6052504,6060888..6060999,6063391..6063480,6065428..6065583,6067765..6067854,6070400..6070501,6074822..6074930,6079861..6080234,6084430..6084532))
location: region:6051425-6084532:-1
so has part: feature:6084430-6084532:-1:exon
so has part: feature:6079861-6080234:-1:exon
so has part: feature:6074822-6074930:-1:exon
so has part: feature:6070400-6070501:-1:exon
so has part: feature:6067765-6067854:-1:exon
so has part: feature:6065428-6065583:-1:exon
so has part: feature:6063391-6063480:-1:exon
so has part: feature:6060888-6060999:-1:exon
so has part: feature:6052331-6052504:-1:exon
so has part: feature:6051425-6051512:-1:exon

XP_020390435.2
type: Protein
SIO_000068: ncbiprotein

position:6051425:-1
position: 6051425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6084532:-1
position: 6084532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6084430-6084532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6079861-6080234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6074822-6074930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6070400-6070501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6067765-6067854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6065428-6065583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6063391-6063480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6060888-6060999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6052331-6052504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6051425-6051512:-1:exon

LOC109936230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member H-like isoform X3
translation: MFLISFAVRFFRFTAPGIMFHWLLFCLCATVIPPAFHVLYVFESSYFHSVVSQERKCHSFTKLPVTDTIIGTNLVVRLLLYTGKNSSCATLINATHTSLLDVNKKTIFLIHGYRPFGSIPNWLTRMTQKLQMVDDINLIIVDWNRGATTINYSVAVANTKRVAEILGDVIDNILKIGGSLDLIHMIGVSLGAHISGFVGSRFSGQIGRITGLDPAGPLFRGKGVEDRLDPADAQLVDVLHTDFDALGYEEFLGNIDYYANGGTDQPGCPATIIAEFLDARCTEHDKTYPIFGYHIDKWKNNHLMKFPNKVFFQTSTEDPFCMYYYLLDIVTWNKNTRKGYITVGMTGQNGVIVKAEANQYAKSFEKFKEVTLLVSVNKDVGNISSISLTFSSAYLVEPKLKLGILQMKLRSLTYPKRPHLCRYDIALQKDLEEEFQLIECQAPEI
SIO_010081: LOC109936230
subclass of: SO_0000673
so part of: LOC109936230
location: complement(join(6051425..6051512,6052331..6052504,6060888..6060999,6063391..6063480,6065428..6065478,6067765..6067854,6070400..6070501,6074822..6074930,6079861..6080279,6084430..6084532))
location: region:6051425-6084532:-1
so has part: feature:6084430-6084532:-1:exon
so has part: feature:6079861-6080279:-1:exon
so has part: feature:6074822-6074930:-1:exon
so has part: feature:6070400-6070501:-1:exon
so has part: feature:6067765-6067854:-1:exon
so has part: feature:6065428-6065478:-1:exon
so has part: feature:6063391-6063480:-1:exon
so has part: feature:6060888-6060999:-1:exon
so has part: feature:6052331-6052504:-1:exon
so has part: feature:6051425-6051512:-1:exon

XP_048458958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6084430-6084532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6079861-6080279:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6074822-6074930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6070400-6070501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6067765-6067854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6065428-6065478:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6063391-6063480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6060888-6060999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6052331-6052504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6051425-6051512:-1:exon

LOC109936230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member H-like isoform X1
translation: MFLISFAVRFFRFTAPGIMFHWLLFCLCATVIPPAFHVLYVFESSYFHSVVSQERKCHSFTKLPVTDTIIGTNLVVRLLLYTGKNSSCATLINATHTSLLDVNKKTIFLIHGYRPFGSIPNWLTRMTQKLQMVDDINLIIVDWNRGATTINYSVAVANTKRVAEILGDVIDNILKIGGSLDLIHMIGVSLGAHISGFVGSRFSGQIGRITGLDPAGPLFRGKGVEDRLDPADAQLVDVLHTDFDALGYEEFLGNIDYYANGGTDQPGCPATIIAGKRYMVCDHQRSVYLYISSMNSTCNITVYPCTSYEEFLDARCTEHDKTYPIFGYHIDKWKNNHLMKFPNKVFFQTSTEDPFCMYYYLLDIVTWNKNTRKGYITVGMTGQNGVIVKAEANQYAKSFEKFKEVTLLVSVNKDVGNISSISLTFSSAYLVEPKLKLGILQMKLRSLTYPKRPHLCRYDIALQKDLEEEFQLIECQAPEI
SIO_010081: LOC109936230
subclass of: SO_0000673
so part of: LOC109936230
location: complement(join(6051425..6051512,6052331..6052504,6060888..6060999,6063391..6063480,6065428..6065583,6067765..6067854,6070400..6070501,6074822..6074930,6079861..6080279,6084430..6084532))
location: region:6051425-6084532:-1
so has part: feature:6084430-6084532:-1:exon
so has part: feature:6079861-6080279:-1:exon
so has part: feature:6074822-6074930:-1:exon
so has part: feature:6070400-6070501:-1:exon
so has part: feature:6067765-6067854:-1:exon
so has part: feature:6065428-6065583:-1:exon
so has part: feature:6063391-6063480:-1:exon
so has part: feature:6060888-6060999:-1:exon
so has part: feature:6052331-6052504:-1:exon
so has part: feature:6051425-6051512:-1:exon

XP_048458957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6084430-6084532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6079861-6080279:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6074822-6074930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6070400-6070501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6067765-6067854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6065428-6065583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6063391-6063480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6060888-6060999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6052331-6052504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6051425-6051512:-1:exon

LOC109936229
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109936229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6110729..6137264)
location: region:6110729-6137264:-1
so has part: feature:6110729-6137264:-1:exon
subclass of: SO_0000010

109936229
type: Gene
SIO_000068: ncbigene

position:6110729:-1
position: 6110729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6137264:-1
position: 6137264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6110729-6137264:-1:exon

LOC109936229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109936229
product: stomatin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048602945.1
SIO_010081: LOC109936229
subclass of: SO_0000673
so part of: LOC109936229
location: complement(join(6110729..6111794,6116699..6116833,6119021..6119224,6124235..6124317,6128302..6128374,6136912..6137000,6137118..6137264))
location: region:6110729-6137264:-1
so has part: feature:6137118-6137264:-1:exon
so has part: feature:6136912-6137000:-1:exon
so has part: feature:6128302-6128374:-1:exon
so has part: feature:6124235-6124317:-1:exon
so has part: feature:6119021-6119224:-1:exon
so has part: feature:6116699-6116833:-1:exon
so has part: feature:6110729-6111794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6137118-6137264:-1:exon

position:6137118:-1
position: 6137118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6136912-6137000:-1:exon

position:6136912:-1
position: 6136912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6137000:-1
position: 6137000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6128302-6128374:-1:exon

position:6128302:-1
position: 6128302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6128374:-1
position: 6128374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6124235-6124317:-1:exon

position:6124235:-1
position: 6124235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6124317:-1
position: 6124317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6119021-6119224:-1:exon

position:6119021:-1
position: 6119021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6119224:-1
position: 6119224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6116699-6116833:-1:exon

position:6116699:-1
position: 6116699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6116833:-1
position: 6116833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6110729-6111794:-1:exon

position:6111794:-1
position: 6111794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109936229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109936229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stomatin-like
translation: MRLNQSKLAPARAEEGSKSQYSASGLGCFGWILIILSIIFTLATLPISIWFCMKIVNEYERAVIFRLGRIVHGRAKGPGIFWILPCTDTVNLVDLRTVSFSVPPQEVLTKDSVTIMVDAIVYYRVFDPVMSVISVINVDSVTHLLAQTTLRNILGTKSLSDVLSDREHMAQEMEHLLFDASKGWGIKVERVEFKDVRLPVVLQRAMAAEAEAVRDAKAKVIAAEGELNASRALKDAATVMSMSPSALQLRYLQTLSEVASERNSTIMFPVPINMALAFSRS
SIO_010081: LOC109936229
subclass of: SO_0000673
so part of: LOC109936229
location: complement(join(6111606..6111794,6116699..6116833,6119021..6119224,6124235..6124317,6128302..6128374,6136912..6137000,6137118..6137190))
location: region:6111606-6137190:-1
so has part: feature:6137118-6137190:-1:exon
so has part: feature:6136912-6137000:-1:exon
so has part: feature:6128302-6128374:-1:exon
so has part: feature:6124235-6124317:-1:exon
so has part: feature:6119021-6119224:-1:exon
so has part: feature:6116699-6116833:-1:exon
so has part: feature:6111606-6111794:-1:exon

XP_048458902.1
type: Protein
SIO_000068: ncbiprotein

position:6111606:-1
position: 6111606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6137190:-1
position: 6137190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6137118-6137190:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6136912-6137000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6128302-6128374:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6124235-6124317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6119021-6119224:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6116699-6116833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6111606-6111794:-1:exon

LOC125484372
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6152307..6167279
location: region:6152307-6167279:1
so has part: feature:6152307-6167279:1:exon
subclass of: SO_0000010

125484372
type: Gene
SIO_000068: ncbigene

position:6152307:1
position: 6152307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6167279:1
position: 6167279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6152307-6167279:1:exon

LOC125484372
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC125484372
product: splicing regulator RBM11-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602743.1
SIO_010081: LOC125484372
subclass of: SO_0000673
so part of: LOC125484372
location: join(6152307..6152537,6156517..6156679,6160394..6160454,6162525..6162627,6166181..6167279)
location: region:6152307-6167279:1
so has part: feature:6152307-6152537:1:exon
so has part: feature:6156517-6156679:1:exon
so has part: feature:6160394-6160454:1:exon
so has part: feature:6162525-6162627:1:exon
so has part: feature:6166181-6167279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6152307-6152537:1:exon

position:6152537:1
position: 6152537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6156517-6156679:1:exon

position:6156517:1
position: 6156517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6156679:1
position: 6156679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6160394-6160454:1:exon

position:6160394:1
position: 6160394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6160454:1
position: 6160454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6162525-6162627:1:exon

position:6162525:1
position: 6162525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6162627:1
position: 6162627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6166181-6167279:1:exon

position:6166181:1
position: 6166181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484372
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: LOC125484372
product: splicing regulator RBM11-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263191.1
SIO_010081: LOC125484372
so part of: LOC125484372
location: join(6152309..6152537,6156517..6156679,6160394..6160454,6162525..6162627,6163706..6163814,6165841..6167279)
location: region:6152309-6167279:1
so has part: feature:6152309-6152537:1:exon
so has part: feature:6156517-6156679:1:exon
so has part: feature:6160394-6160454:1:exon
so has part: feature:6162525-6162627:1:exon
so has part: feature:6163706-6163814:1:exon
so has part: feature:6165841-6167279:1:exon

position:6152309:1
position: 6152309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6152309-6152537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6156517-6156679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6160394-6160454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6162525-6162627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6163706-6163814:1:exon

position:6163706:1
position: 6163706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6163814:1
position: 6163814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6165841-6167279:1:exon

position:6165841:1
position: 6165841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484372
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC125484372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing regulator RBM11-like
translation: MSKQDEADRTIFVGNLDSSTREEILFELFLQAGPLTKVHIAKDKDGRQKTYGFVCFKHTESVPYAITLLNGIRLYGRPLNLQYRSGSSHTVGLENSPCQAPQESFRNPPFQDRPGSSLYLTPPYSMNNHVNPDPYYWQTMMNTYALQQYHINSQMVQQQQYYQAMAQVGLPAQMSHFSPMSEYMSKSHQPAWENCLQRDRVPENCSSSGGGGQARESDSDSDNRSMEKLQTTSKQRGHQYKKHKSKKKKY
SIO_010081: LOC125484372
subclass of: SO_0000673
so part of: LOC125484372
location: join(6152445..6152537,6156517..6156679,6160394..6160454,6162525..6162627,6166181..6166513)
location: region:6152445-6166513:1
so has part: feature:6152445-6152537:1:exon
so has part: feature:6156517-6156679:1:exon
so has part: feature:6160394-6160454:1:exon
so has part: feature:6162525-6162627:1:exon
so has part: feature:6166181-6166513:1:exon

XP_048458700.1
type: Protein
SIO_000068: ncbiprotein

position:6152445:1
position: 6152445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6166513:1
position: 6166513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6152445-6152537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6156517-6156679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6160394-6160454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6162525-6162627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6166181-6166513:1:exon

LOC109921123
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109921123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6172385..6216134
location: region:6172385-6216134:1
so has part: feature:6172385-6216134:1:exon
subclass of: SO_0000010

109921123
type: Gene
SIO_000068: ncbigene

position:6172385:1
position: 6172385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6216134:1
position: 6216134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6172385-6216134:1:exon

LOC109921123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109921123
product: lysozyme C-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048603361.1
SIO_010081: LOC109921123
subclass of: SO_0000673
so part of: LOC109921123
location: join(6172385..6172413,6200937..6201157,6203827..6204000,6210378..6210456,6214944..6216134)
location: region:6172385-6216134:1
so has part: feature:6172385-6172413:1:exon
so has part: feature:6200937-6201157:1:exon
so has part: feature:6203827-6204000:1:exon
so has part: feature:6210378-6210456:1:exon
so has part: feature:6214944-6216134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6172385-6172413:1:exon

position:6172413:1
position: 6172413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6200937-6201157:1:exon

position:6200937:1
position: 6200937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6201157:1
position: 6201157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6203827-6204000:1:exon

position:6203827:1
position: 6203827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6204000:1
position: 6204000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6210378-6210456:1:exon

position:6210378:1
position: 6210378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6210456:1
position: 6210456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6214944-6216134:1:exon

position:6214944:1
position: 6214944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109921123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109921123
product: lysozyme C-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048603360.1
SIO_010081: LOC109921123
subclass of: SO_0000673
so part of: LOC109921123
location: join(6193729..6193971,6200937..6201157,6203827..6204000,6210378..6210456,6214944..6216134)
location: region:6193729-6216134:1
so has part: feature:6193729-6193971:1:exon
so has part: feature:6200937-6201157:1:exon
so has part: feature:6203827-6204000:1:exon
so has part: feature:6210378-6210456:1:exon
so has part: feature:6214944-6216134:1:exon

position:6193729:1
position: 6193729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6193729-6193971:1:exon

position:6193971:1
position: 6193971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6200937-6201157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6203827-6204000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6210378-6210456:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6214944-6216134:1:exon

LOC109921123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109921123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme C-1-like
translation: MCTRSMKTLLILSAILTIARTKTFERCELARIFKYAGLDGYEGYSLQNWICTAFYESAYNSAALNIEWHRGKILSMDCGLFQINSFWWCLDNDTPVSLRNCGMNCSDFLDDDLTDDIVCVKSIVKLHPGMSAWTTWNSNCHRKNIDHFAAGCGI
SIO_010081: LOC109921123
subclass of: SO_0000673
so part of: LOC109921123
location: join(6201013..6201157,6203827..6204000,6210378..6210456,6214944..6215010)
location: region:6201013-6215010:1
so has part: feature:6201013-6201157:1:exon
so has part: feature:6203827-6204000:1:exon
so has part: feature:6210378-6210456:1:exon
so has part: feature:6214944-6215010:1:exon

XP_048459317.1
type: Protein
SIO_000068: ncbiprotein

position:6201013:1
position: 6201013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6215010:1
position: 6215010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6201013-6201157:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6203827-6204000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6210378-6210456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6214944-6215010:1:exon

LOC109921123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109921123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme C-1-like
translation: MCTRSMKTLLILSAILTIARTKTFERCELARIFKYAGLDGYEGYSLQNWICTAFYESAYNSAALNIEWHRGKILSMDCGLFQINSFWWCLDNDTPVSLRNCGMNCSDFLDDDLTDDIVCVKSIVKLHPGMSAWTTWNSNCHRKNIDHFAAGCGI
SIO_010081: LOC109921123
subclass of: SO_0000673
so part of: LOC109921123
location: join(6201013..6201157,6203827..6204000,6210378..6210456,6214944..6215010)
location: region:6201013-6215010:1
so has part: feature:6201013-6201157:1:exon
so has part: feature:6203827-6204000:1:exon
so has part: feature:6210378-6210456:1:exon
so has part: feature:6214944-6215010:1:exon

XP_048459318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6201013-6201157:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6203827-6204000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6210378-6210456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6214944-6215010:1:exon

LOC109921122
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109921122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6233455..6235175)
location: region:6233455-6235175:-1
so has part: feature:6233455-6235175:-1:exon
subclass of: SO_0000010

109921122
type: Gene
SIO_000068: ncbigene

position:6233455:-1
position: 6233455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6235175:-1
position: 6235175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6233455-6235175:-1:exon

LOC109921122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109921122
product: lysozyme C-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_048603018.1
SIO_010081: LOC109921122
subclass of: SO_0000673
so part of: LOC109921122
location: complement(join(6233455..6233708,6235046..6235175))
location: region:6233455-6235175:-1
so has part: feature:6235046-6235175:-1:exon
so has part: feature:6233455-6233708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6235046-6235175:-1:exon

position:6235046:-1
position: 6235046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6233455-6233708:-1:exon

position:6233708:-1
position: 6233708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109921122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109921122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme C-2-like
translation: MKTLLLLSLLLMSIDAKVYEKCEFARILKDKGLDGFHRHRLTDWVCMVEIESGYNTALKRHYRNLGIITSTNYGIFQINNKEWCDDGTPAFSYNLCQIKCSSKSTNATSILLLACICCGSISNTLNL
SIO_010081: LOC109921122
subclass of: SO_0000673
so part of: LOC109921122
location: complement(join(6233455..6233708,6235046..6235175))
location: region:6233455-6235175:-1
so has part: feature:6235046-6235175:-1:exon
so has part: feature:6233455-6233708:-1:exon

XP_048458975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6235046-6235175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6233455-6233708:-1:exon

LOC109921121
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109921121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6253744..6271523)
location: region:6253744-6271523:-1
so has part: feature:6253744-6271523:-1:exon
subclass of: SO_0000010

109921121
type: Gene
SIO_000068: ncbigene

position:6253744:-1
position: 6253744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6271523:-1
position: 6271523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6253744-6271523:-1:exon

LOC109921121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109921121
product: lysozyme C-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71 Proteins
transcript id: XM_020521169.1
SIO_010081: LOC109921121
subclass of: SO_0000673
so part of: LOC109921121
location: complement(join(6253744..6253810,6263503..6263578,6266855..6267034,6271394..6271523))
location: region:6253744-6271523:-1
so has part: feature:6271394-6271523:-1:exon
so has part: feature:6266855-6267034:-1:exon
so has part: feature:6263503-6263578:-1:exon
so has part: feature:6253744-6253810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6271394-6271523:-1:exon

position:6271394:-1
position: 6271394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6266855-6267034:-1:exon

position:6266855:-1
position: 6266855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6267034:-1
position: 6267034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6263503-6263578:-1:exon

position:6263503:-1
position: 6263503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6263578:-1
position: 6263578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6253744-6253810:-1:exon

position:6253810:-1
position: 6253810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109921121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109921121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme C-1-like
translation: MKTFLILSALLTGTSPYVYQKCELAQLLRRNGLDGYRGYSLANWVCLVQHESNYNTRIVGHNRRAGRTLSSDYGIFQINSVKWCEDGQTQHPKKRKGCRKRCSDFINDNIIDDIQCAKRIVTPQGMNAWYSWKKKCQSRNLGDFLDDCKI
SIO_010081: LOC109921121
subclass of: SO_0000673
so part of: LOC109921121
location: complement(join(6253744..6253810,6263503..6263578,6266855..6267034,6271394..6271523))
location: region:6253744-6271523:-1
so has part: feature:6271394-6271523:-1:exon
so has part: feature:6266855-6267034:-1:exon
so has part: feature:6263503-6263578:-1:exon
so has part: feature:6253744-6253810:-1:exon

XP_020376758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6271394-6271523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6266855-6267034:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6263503-6263578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6253744-6253810:-1:exon

LOC125484427
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6399605..6410951)
location: region:6399605-6410951:-1
so has part: feature:6399605-6410951:-1:exon
subclass of: SO_0000011

125484427
type: Gene
SIO_000068: ncbigene

position:6399605:-1
position: 6399605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6410951:-1
position: 6410951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6399605-6410951:-1:exon

LOC125484427
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484427
product: uncharacterized LOC125484427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007263247.1
SIO_010081: LOC125484427
subclass of: SO_0000673
so part of: LOC125484427
location: complement(join(6399605..6399873,6400358..6400680,6400840..6401013,6410019..6410951))
location: region:6399605-6410951:-1
so has part: feature:6410019-6410951:-1:exon
so has part: feature:6400840-6401013:-1:exon
so has part: feature:6400358-6400680:-1:exon
so has part: feature:6399605-6399873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6410019-6410951:-1:exon

position:6410019:-1
position: 6410019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6400840-6401013:-1:exon

position:6400840:-1
position: 6400840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6401013:-1
position: 6401013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6400358-6400680:-1:exon

position:6400358:-1
position: 6400358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6400680:-1
position: 6400680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6399605-6399873:-1:exon

position:6399873:-1
position: 6399873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109937301
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109937301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6418233..6529606
location: region:6418233-6529606:1
so has part: feature:6418233-6529606:1:exon
subclass of: SO_0000010

109937301
type: Gene
SIO_000068: ncbigene

position:6418233:1
position: 6418233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6529606:1
position: 6529606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6418233-6529606:1:exon

LOC109937301
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109937301
product: lysozyme C-1/C-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020535907.2
SIO_010081: LOC109937301
subclass of: SO_0000673
so part of: LOC109937301
location: join(6418233..6418450,6420823..6420999,6525596..6525677,6529543..6529606)
location: region:6418233-6529606:1
so has part: feature:6418233-6418450:1:exon
so has part: feature:6420823-6420999:1:exon
so has part: feature:6525596-6525677:1:exon
so has part: feature:6529543-6529606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6418233-6418450:1:exon

position:6418450:1
position: 6418450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6420823-6420999:1:exon

position:6420823:1
position: 6420823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6420999:1
position: 6420999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6525596-6525677:1:exon

position:6525596:1
position: 6525596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6525677:1
position: 6525677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6529543-6529606:1:exon

position:6529543:1
position: 6529543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109937301
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109937301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme C-1/C-2-like
translation: MKILVVLSVLLTVSSAKILTRCEFARIVKNSILSNFTSQNMNDWMCLAFYESQYDTLALRYNQPSDGKIGSENFGIFQINSSWWCDSWRFANSPNYCHISCNEFLQDNKNLVSNTLCAAVIVNRQGMEAWSSWIKKCKGKFLGHFTESCF
SIO_010081: LOC109937301
subclass of: SO_0000673
so part of: LOC109937301
location: join(6418321..6418450,6420823..6420999,6525596..6525677,6529543..6529606)
location: region:6418321-6529606:1
so has part: feature:6418321-6418450:1:exon
so has part: feature:6420823-6420999:1:exon
so has part: feature:6525596-6525677:1:exon
so has part: feature:6529543-6529606:1:exon

XP_020391496.2
type: Protein
SIO_000068: ncbiprotein

position:6418321:1
position: 6418321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6418321-6418450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6420823-6420999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6525596-6525677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6529543-6529606:1:exon

LOC109924986
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6640188..6651111
location: region:6640188-6651111:1
so has part: feature:6640188-6651111:1:exon
subclass of: SO_0000010

109924986
type: Gene
SIO_000068: ncbigene

position:6640188:1
position: 6640188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6651111:1
position: 6651111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6640188-6651111:1:exon

LOC109924986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924986
product: lysozyme C-1/C-2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603121.1
SIO_010081: LOC109924986
subclass of: SO_0000673
so part of: LOC109924986
location: join(6640188..6640369,6647296..6647469,6648718..6648793,6650888..6651111)
location: region:6640188-6651111:1
so has part: feature:6640188-6640369:1:exon
so has part: feature:6647296-6647469:1:exon
so has part: feature:6648718-6648793:1:exon
so has part: feature:6650888-6651111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6640188-6640369:1:exon

position:6640369:1
position: 6640369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6647296-6647469:1:exon

position:6647296:1
position: 6647296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6647469:1
position: 6647469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6648718-6648793:1:exon

position:6648718:1
position: 6648718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6648793:1
position: 6648793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6650888-6651111:1:exon

position:6650888:1
position: 6650888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme C-1/C-2-like
translation: MKILIVLSVLLTVSSAETLSRCQVVKAIKDSILTKFTHYSVADWVCLAYHESQYNAMEIGHETRNGKIWASEYGIFQISSKWWCDDGRTPNSENGCGIACNELLSNNLKPDIECAAKIVAKNGMEAWSSWVENCKDKWINYYTYLCF
SIO_010081: LOC109924986
subclass of: SO_0000673
so part of: LOC109924986
location: join(6640240..6640369,6647296..6647469,6648718..6648793,6650888..6650951)
location: region:6640240-6650951:1
so has part: feature:6640240-6640369:1:exon
so has part: feature:6647296-6647469:1:exon
so has part: feature:6648718-6648793:1:exon
so has part: feature:6650888-6650951:1:exon

XP_048459078.1
type: Protein
SIO_000068: ncbiprotein

position:6640240:1
position: 6640240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6650951:1
position: 6650951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6640240-6640369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6647296-6647469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6648718-6648793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6650888-6650951:1:exon

LOC125484426
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6649628..6650906)
location: region:6649628-6650906:-1
so has part: feature:6649628-6650906:-1:exon
subclass of: SO_0000011

125484426
type: Gene
SIO_000068: ncbigene

position:6649628:-1
position: 6649628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6650906:-1
position: 6650906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6649628-6650906:-1:exon

LOC125484426
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484426
product: uncharacterized LOC125484426
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263246.1
SIO_010081: LOC125484426
subclass of: SO_0000673
so part of: LOC125484426
location: complement(join(6649628..6649880,6650859..6650906))
location: region:6649628-6650906:-1
so has part: feature:6650859-6650906:-1:exon
so has part: feature:6649628-6649880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6650859-6650906:-1:exon

position:6650859:-1
position: 6650859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6649628-6649880:-1:exon

position:6649880:-1
position: 6649880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109924965
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109924965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6664372..6675232
location: region:6664372-6675232:1
so has part: feature:6664372-6675232:1:exon
subclass of: SO_0000010

109924965
type: Gene
SIO_000068: ncbigene

position:6664372:1
position: 6664372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6675232:1
position: 6675232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6664372-6675232:1:exon

LOC109924965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924965
product: lysozyme C-1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603227.1
SIO_010081: LOC109924965
subclass of: SO_0000673
so part of: LOC109924965
location: join(6664372..6664563,6665455..6665631,6668654..6668735,6675073..6675232)
location: region:6664372-6675232:1
so has part: feature:6664372-6664563:1:exon
so has part: feature:6665455-6665631:1:exon
so has part: feature:6668654-6668735:1:exon
so has part: feature:6675073-6675232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6664372-6664563:1:exon

position:6664563:1
position: 6664563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6665455-6665631:1:exon

position:6665455:1
position: 6665455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6665631:1
position: 6665631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6668654-6668735:1:exon

position:6668654:1
position: 6668654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6668735:1
position: 6668735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6675073-6675232:1:exon

position:6675073:1
position: 6675073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109924965
product: lysozyme C-1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603226.1
SIO_010081: LOC109924965
subclass of: SO_0000673
so part of: LOC109924965
location: join(6664375..6664563,6665455..6665631,6668654..6668735,6675009..6675232)
location: region:6664375-6675232:1
so has part: feature:6664375-6664563:1:exon
so has part: feature:6665455-6665631:1:exon
so has part: feature:6668654-6668735:1:exon
so has part: feature:6675009-6675232:1:exon

position:6664375:1
position: 6664375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6664375-6664563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6665455-6665631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6668654-6668735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6675009-6675232:1:exon

position:6675009:1
position: 6675009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109924965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme C-3-like isoform X2
translation: MKILVVLSVLLTVSSAKILSRCEVARAVKNSVLAMFTQYSVADWVCMAYHETGYNTLALRYEKDSEGKIQSGDYGIFQINSKRWCTDDMFPNGADECHMNCNTFLSSNGDIQTDIDCAAVIVNEQGMQACKGGGDRVDQTLSL
SIO_010081: LOC109924965
subclass of: SO_0000673
so part of: LOC109924965
location: join(6664434..6664563,6665455..6665631,6668654..6668735,6675073..6675115)
location: region:6664434-6675115:1
so has part: feature:6664434-6664563:1:exon
so has part: feature:6665455-6665631:1:exon
so has part: feature:6668654-6668735:1:exon
so has part: feature:6675073-6675115:1:exon

XP_048459184.1
type: Protein
SIO_000068: ncbiprotein

position:6664434:1
position: 6664434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6675115:1
position: 6675115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6664434-6664563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6665455-6665631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6668654-6668735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6675073-6675115:1:exon

LOC109924965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109924965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme C-1-like isoform X1
translation: MKILVVLSVLLTVSSAKILSRCEVARAVKNSVLAMFTQYSVADWVCMAYHETGYNTLALRYEKDSEGKIQSGDYGIFQINSKRWCTDDMFPNGADECHMNCNTFLSSNGDIQTDIDCAAVIVNEQGMQAWTSWVKNCKGKWIDYYTFFCF
SIO_010081: LOC109924965
subclass of: SO_0000673
so part of: LOC109924965
location: join(6664434..6664563,6665455..6665631,6668654..6668735,6675009..6675072)
location: region:6664434-6675072:1
so has part: feature:6664434-6664563:1:exon
so has part: feature:6665455-6665631:1:exon
so has part: feature:6668654-6668735:1:exon
so has part: feature:6675009-6675072:1:exon

XP_048459183.1
type: Protein
SIO_000068: ncbiprotein

position:6675072:1
position: 6675072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6664434-6664563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6665455-6665631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6668654-6668735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6675009-6675072:1:exon

hspa13
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: hspa13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6717011..6732636)
location: region:6717011-6732636:-1
so has part: feature:6717011-6732636:-1:exon
subclass of: SO_0000010

109913206
type: Gene
SIO_000068: ncbigene

position:6717011:-1
position: 6717011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6732636:-1
position: 6732636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6717011-6732636:-1:exon

hspa13
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: hspa13
product: heat shock protein 70 family, member 13, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263230.1
SIO_010081: hspa13
so part of: hspa13
location: complement(join(6717011..6717522,6718427..6718660,6720109..6721619,6723402..6723569,6727112..6727325,6728345..6728685,6732410..6732636))
location: region:6717011-6732636:-1
so has part: feature:6732410-6732636:-1:exon
so has part: feature:6728345-6728685:-1:exon
so has part: feature:6727112-6727325:-1:exon
so has part: feature:6723402-6723569:-1:exon
so has part: feature:6720109-6721619:-1:exon
so has part: feature:6718427-6718660:-1:exon
so has part: feature:6717011-6717522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6732410-6732636:-1:exon

position:6732410:-1
position: 6732410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6728345-6728685:-1:exon

position:6728345:-1
position: 6728345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6728685:-1
position: 6728685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6727112-6727325:-1:exon

position:6727112:-1
position: 6727112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6727325:-1
position: 6727325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6723402-6723569:-1:exon

position:6723402:-1
position: 6723402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6723569:-1
position: 6723569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6720109-6721619:-1:exon

position:6720109:-1
position: 6720109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6721619:-1
position: 6721619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6718427-6718660:-1:exon

position:6718427:-1
position: 6718427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6718660:-1
position: 6718660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6717011-6717522:-1:exon

position:6717522:-1
position: 6717522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hspa13
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 259920
gene: hspa13
product: heat shock protein 70 family, member 13, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263229.1
SIO_010081: hspa13
so part of: hspa13
location: complement(join(6717011..6718660,6720109..6721619,6723402..6723569,6727112..6727325,6728345..6728685,6732410..6732636))
location: region:6717011-6732636:-1
so has part: feature:6732410-6732636:-1:exon
so has part: feature:6728345-6728685:-1:exon
so has part: feature:6727112-6727325:-1:exon
so has part: feature:6723402-6723569:-1:exon
so has part: feature:6720109-6721619:-1:exon
so has part: feature:6717011-6718660:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6732410-6732636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6728345-6728685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6727112-6727325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6723402-6723569:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6720109-6721619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6717011-6718660:-1:exon

hspa13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: hspa13
product: heat shock protein 70 family, member 13, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020512692.2
SIO_010081: hspa13
subclass of: SO_0000673
so part of: hspa13
location: complement(join(6717011..6721619,6723402..6723569,6727112..6727325,6728345..6728685,6732410..6732636))
location: region:6717011-6732636:-1
so has part: feature:6732410-6732636:-1:exon
so has part: feature:6728345-6728685:-1:exon
so has part: feature:6727112-6727325:-1:exon
so has part: feature:6723402-6723569:-1:exon
so has part: feature:6717011-6721619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6732410-6732636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6728345-6728685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6727112-6727325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6723402-6723569:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6717011-6721619:-1:exon

hspa13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: hspa13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 13
translation: MAGAMAILGSSILALLLAGYLAQQYLPPPKPKVIGVDLGTTYCSVGVFQPGTGKVEVIADKAGRKSLPSMVLFTNQEALVGYEAQELADANPLNTLYDAKRFIGKQFTPEELRAESSRYQFKILYNKGNAEFSVIANESLSITPEYVGSRLLFELKKMAEEYLGVPVSKAVISVPAEFDERQRNHTVKAAQLAGLDILRVINEPTAAAMAYGLHKVDVFNVLVVDLGGGTLDVSLLNKQGGMFLTRAMAGNNQLGGQDFNQRLLQFLFNQIHQRYSTVPTDKQDVHHLRQAVEAAKLNLTLYDSVLIQVPLSLPGSSEAGGEPGGGSSKVLFEETVTRDLFETLNQDLFKKILDPVEDVLSRGHLGRYEVDEIVLVGGSTRIPRIRQVIREFFGKEPNTSVDPDLAVVIGVALQAGIMGGSWPLQVSALEIPNRHLQKVNFN
SIO_010081: hspa13
subclass of: SO_0000673
so part of: hspa13
location: complement(join(6721039..6721619,6723402..6723569,6727112..6727325,6728345..6728685,6732410..6732434))
location: region:6721039-6732434:-1
so has part: feature:6732410-6732434:-1:exon
so has part: feature:6728345-6728685:-1:exon
so has part: feature:6727112-6727325:-1:exon
so has part: feature:6723402-6723569:-1:exon
so has part: feature:6721039-6721619:-1:exon

XP_020368281.1
type: Protein
SIO_000068: ncbiprotein

position:6721039:-1
position: 6721039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6732434:-1
position: 6732434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6732410-6732434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6728345-6728685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6727112-6727325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6723402-6723569:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6721039-6721619:-1:exon

LOC109913204
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109913204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6743877..6816187)
location: region:6743877-6816187:-1
so has part: feature:6743877-6816187:-1:exon
subclass of: SO_0000010

109913204
type: Gene
SIO_000068: ncbigene

position:6743877:-1
position: 6743877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6816187:-1
position: 6816187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6743877-6816187:-1:exon

LOC109913204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109913204
product: SAM domain-containing protein SAMSN-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048603307.1
SIO_010081: LOC109913204
subclass of: SO_0000673
so part of: LOC109913204
location: complement(join(6743877..6746716,6749514..6749658,6751861..6752067,6755648..6755799,6763615..6763741,6769138..6769296,6770992..6771072,6816062..6816187))
location: region:6743877-6816187:-1
so has part: feature:6816062-6816187:-1:exon
so has part: feature:6770992-6771072:-1:exon
so has part: feature:6769138-6769296:-1:exon
so has part: feature:6763615-6763741:-1:exon
so has part: feature:6755648-6755799:-1:exon
so has part: feature:6751861-6752067:-1:exon
so has part: feature:6749514-6749658:-1:exon
so has part: feature:6743877-6746716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6816062-6816187:-1:exon

position:6816062:-1
position: 6816062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6770992-6771072:-1:exon

position:6770992:-1
position: 6770992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6771072:-1
position: 6771072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6769138-6769296:-1:exon

position:6769138:-1
position: 6769138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6769296:-1
position: 6769296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6763615-6763741:-1:exon

position:6763615:-1
position: 6763615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6763741:-1
position: 6763741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6755648-6755799:-1:exon

position:6755648:-1
position: 6755648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6755799:-1
position: 6755799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6751861-6752067:-1:exon

position:6751861:-1
position: 6751861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6752067:-1
position: 6752067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6749514-6749658:-1:exon

position:6749514:-1
position: 6749514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6749658:-1
position: 6749658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6743877-6746716:-1:exon

position:6746716:-1
position: 6746716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109913204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109913204
product: SAM domain-containing protein SAMSN-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_020512690.2
SIO_010081: LOC109913204
subclass of: SO_0000673
so part of: LOC109913204
location: complement(join(6743877..6746716,6749514..6749658,6751861..6752067,6755648..6755802,6763615..6763741,6769138..6769296,6770992..6771072,6816062..6816187))
location: region:6743877-6816187:-1
so has part: feature:6816062-6816187:-1:exon
so has part: feature:6770992-6771072:-1:exon
so has part: feature:6769138-6769296:-1:exon
so has part: feature:6763615-6763741:-1:exon
so has part: feature:6755648-6755802:-1:exon
so has part: feature:6751861-6752067:-1:exon
so has part: feature:6749514-6749658:-1:exon
so has part: feature:6743877-6746716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6816062-6816187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6770992-6771072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6769138-6769296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6763615-6763741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755648-6755802:-1:exon

position:6755802:-1
position: 6755802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6751861-6752067:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6749514-6749658:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6743877-6746716:-1:exon

LOC109913204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109913204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAM domain-containing protein SAMSN-1 isoform X2
translation: MIRRKVSNASDKDKKCLKPKRTSSFGNFDRFRHHPHTPKPEEKADDSAGEAEQGGEAAGEQNPPKSGQNESGLGKTMRAISKTMRKKMARRYANALSEGMPEANAEEVTNETIGEHDAEDGTLRACESMESLYSLNSGQSSSSGIASGSDAASNRDSLRLDEEVPYTGPFCGRAKVHTDFTPSPYDTDSLKLKKGDIINIINKPTMGTWTGMLNGKVGNFKFIYVDILPNEEAVPKKLKTDRRSRQPVPDSLQELLERFQLQDLYSAFLLNGYQCLEDLKDLKESHLIELNITDAEQRALLLTAAQQDYNVLSDQEEESDVITESQPSDLKLDQAHLKECPRDSGCYATSEISDNGKEDLDLESLPEMVEGASLAD
SIO_010081: LOC109913204
subclass of: SO_0000673
so part of: LOC109913204
location: complement(join(6746517..6746716,6749514..6749658,6751861..6752067,6755648..6755799,6763615..6763741,6769138..6769296,6770992..6771072,6816062..6816121))
location: region:6746517-6816121:-1
so has part: feature:6816062-6816121:-1:exon
so has part: feature:6770992-6771072:-1:exon
so has part: feature:6769138-6769296:-1:exon
so has part: feature:6763615-6763741:-1:exon
so has part: feature:6755648-6755799:-1:exon
so has part: feature:6751861-6752067:-1:exon
so has part: feature:6749514-6749658:-1:exon
so has part: feature:6746517-6746716:-1:exon

XP_048459264.1
type: Protein
SIO_000068: ncbiprotein

position:6746517:-1
position: 6746517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6816121:-1
position: 6816121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6816062-6816121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6770992-6771072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6769138-6769296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6763615-6763741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755648-6755799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6751861-6752067:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6749514-6749658:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6746517-6746716:-1:exon

LOC109913204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109913204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAM domain-containing protein SAMSN-1 isoform X1
translation: MIRRKVSNASDKDKKCLKPKRTSSFGNFDRFRHHPHTPKPEEKADDSAGEAEQGGEAAGEQNPPKSGQNESGLGKTMRAISKTMRKKMARRYANALSEGMPEANAEEVTNETIGEHDAEDGTLRACESMESLYSLNSGQSSSTGGIASGSDAASNRDSLRLDEEVPYTGPFCGRAKVHTDFTPSPYDTDSLKLKKGDIINIINKPTMGTWTGMLNGKVGNFKFIYVDILPNEEAVPKKLKTDRRSRQPVPDSLQELLERFQLQDLYSAFLLNGYQCLEDLKDLKESHLIELNITDAEQRALLLTAAQQDYNVLSDQEEESDVITESQPSDLKLDQAHLKECPRDSGCYATSEISDNGKEDLDLESLPEMVEGASLAD
SIO_010081: LOC109913204
subclass of: SO_0000673
so part of: LOC109913204
location: complement(join(6746517..6746716,6749514..6749658,6751861..6752067,6755648..6755802,6763615..6763741,6769138..6769296,6770992..6771072,6816062..6816121))
location: region:6746517-6816121:-1
so has part: feature:6816062-6816121:-1:exon
so has part: feature:6770992-6771072:-1:exon
so has part: feature:6769138-6769296:-1:exon
so has part: feature:6763615-6763741:-1:exon
so has part: feature:6755648-6755802:-1:exon
so has part: feature:6751861-6752067:-1:exon
so has part: feature:6749514-6749658:-1:exon
so has part: feature:6746517-6746716:-1:exon

XP_020368279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6816062-6816121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6770992-6771072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6769138-6769296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6763615-6763741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755648-6755802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6751861-6752067:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6749514-6749658:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6746517-6746716:-1:exon

nrip1a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: nrip1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7042517..7140548)
location: region:7042517-7140548:-1
so has part: feature:7042517-7140548:-1:exon
subclass of: SO_0000010

109919035
type: Gene
SIO_000068: ncbigene

position:7042517:-1
position: 7042517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7140548:-1
position: 7140548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7042517-7140548:-1:exon

nrip1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nrip1a
product: nuclear receptor interacting protein 1a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048603266.1
SIO_010081: nrip1a
subclass of: SO_0000673
so part of: nrip1a
location: complement(join(7042517..7049638,7140478..7140548))
location: region:7042517-7140548:-1
so has part: feature:7140478-7140548:-1:exon
so has part: feature:7042517-7049638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7140478-7140548:-1:exon

position:7140478:-1
position: 7140478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7042517-7049638:-1:exon

position:7049638:-1
position: 7049638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nrip1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nrip1a
product: nuclear receptor interacting protein 1a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020518992.2
SIO_010081: nrip1a
subclass of: SO_0000673
so part of: nrip1a
location: complement(join(7042517..7049638,7112334..7112479))
location: region:7042517-7112479:-1
so has part: feature:7112334-7112479:-1:exon
so has part: feature:7042517-7049638:-1:exon

position:7112479:-1
position: 7112479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7112334-7112479:-1:exon

position:7112334:-1
position: 7112334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7042517-7049638:-1:exon

nrip1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: nrip1a
product: nuclear receptor interacting protein 1a, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048603267.1
SIO_010081: nrip1a
subclass of: SO_0000673
so part of: nrip1a
location: complement(join(7042517..7049638,7053346..7053406))
location: region:7042517-7053406:-1
so has part: feature:7053346-7053406:-1:exon
so has part: feature:7042517-7049638:-1:exon

position:7053406:-1
position: 7053406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7053346-7053406:-1:exon

position:7053346:-1
position: 7053346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7042517-7049638:-1:exon

nrip1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nrip1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELCSEMHQDSVVLTYLESVLMHQASGGSMGTPSTKGTSEKEGAACKSSDIHCSGGGGGGAEGFVVSPSQQRASKAASTLNVKKARLLQAEACDGAKRRRVCGHGLQSNDQEGTAKQGELGKAQQQQHSTLLASLLQSFSSRLQNVALSQQAGAPRLSQAPSLGSPPEDDLRSYGLVSNHLRALLKNREPSQSEHLPKEPDGLYQSPAERPRFPSSPADHQGAAEPISCSARLRAVASMVENGARSNGSPKPSVACSQLALLLSSDTQLQQYTREHSLGARAPHPSASQRLAAIANQKVAEPSSPRDPARDHCSKDGHRRGASRGNPGVPEQSLRLAGHTRSPSGTREKSVGERDRSPLGPNNSSSLLMHLLNTNSIPKSSADASTETTNGHRWLGAERRGGPAFDYRLPAWEKPVKQEAGSLEETYSSDESSRSSCTPMDLSTKPRMCEPISLHSRSLEQMTESLLFSWNPKGPRVQSPEAKEDRNGPESKSHQKVTLLQLLLGHQNGARGNCTPEPQAPELKTERPSSIVTTPEASVAGIALSQRPRGPEHFPPSSSASSSSSSSSSSLSSSFQAAEQSAVVKVTRSPPAPAAHRLPPLCHASDGTHHLLARRGKLASSSEPSKTLQHFPQQLEAAKGHRALEPLLPSELAKAHQFPKHFASTELATNSQYVSRQPLTSESRLSNFSFSASKLLQDLAHTGFHKSPETSQADAEDKNVVLSSVETRMGESAESLTFSRSAKQSVLLEPRARRDRRPLQPGPVPSSDLESLLERRSVLQLLLKTPKKDKVPTATLHGRPGDHQTLAGPQPPGTQCNGQAADTEPISMVKVKTEPIEEEGGFPSTAEPMDQSANCQPLVPSKTEQKHPSFTLGSVKQEVASPAVPSSRAQCHPCQKGGVLSQLLQRDNTATLGSYAFSQHPAAGNLAEAPTPTSGSSSPCNIPKKRKPPPTPPSELDDLHKMVDQSEGLNSHDLPSREAANGLSSSPACGTRLLDFQPGNGLEFESRSNVKDPQGFNVLKQLLLSENGIKVLPGHRTLHNGSSASDRGSRPDRRLEGDRPTRFYSPSEQLNGNQNETVSAFEPARYLGILPAAGSSAHYAAENPASATVPAQSEPEHQAPSLGMPTEPPWLTKTNPILYYMLQRGGLGLVPSRARAGEGGAAEADRRRKPPPRQRAEQLGGGVGVLPSRRTVKAEPGEDSLAGLQGLAPGVPPDLNENARGILEKVAAIKREPD
SIO_010081: nrip1a
subclass of: SO_0000673
so part of: nrip1a
location: complement(7045492..7049208)
location: region:7045492-7049208:-1
so has part: feature:7045492-7049208:-1:exon

XP_020374581.1
type: Protein
SIO_000068: ncbiprotein

position:7045492:-1
position: 7045492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7049208:-1
position: 7049208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7045492-7049208:-1:exon

nrip1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nrip1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELCSEMHQDSVVLTYLESVLMHQASGGSMGTPSTKGTSEKEGAACKSSDIHCSGGGGGGAEGFVVSPSQQRASKAASTLNVKKARLLQAEACDGAKRRRVCGHGLQSNDQEGTAKQGELGKAQQQQHSTLLASLLQSFSSRLQNVALSQQAGAPRLSQAPSLGSPPEDDLRSYGLVSNHLRALLKNREPSQSEHLPKEPDGLYQSPAERPRFPSSPADHQGAAEPISCSARLRAVASMVENGARSNGSPKPSVACSQLALLLSSDTQLQQYTREHSLGARAPHPSASQRLAAIANQKVAEPSSPRDPARDHCSKDGHRRGASRGNPGVPEQSLRLAGHTRSPSGTREKSVGERDRSPLGPNNSSSLLMHLLNTNSIPKSSADASTETTNGHRWLGAERRGGPAFDYRLPAWEKPVKQEAGSLEETYSSDESSRSSCTPMDLSTKPRMCEPISLHSRSLEQMTESLLFSWNPKGPRVQSPEAKEDRNGPESKSHQKVTLLQLLLGHQNGARGNCTPEPQAPELKTERPSSIVTTPEASVAGIALSQRPRGPEHFPPSSSASSSSSSSSSSLSSSFQAAEQSAVVKVTRSPPAPAAHRLPPLCHASDGTHHLLARRGKLASSSEPSKTLQHFPQQLEAAKGHRALEPLLPSELAKAHQFPKHFASTELATNSQYVSRQPLTSESRLSNFSFSASKLLQDLAHTGFHKSPETSQADAEDKNVVLSSVETRMGESAESLTFSRSAKQSVLLEPRARRDRRPLQPGPVPSSDLESLLERRSVLQLLLKTPKKDKVPTATLHGRPGDHQTLAGPQPPGTQCNGQAADTEPISMVKVKTEPIEEEGGFPSTAEPMDQSANCQPLVPSKTEQKHPSFTLGSVKQEVASPAVPSSRAQCHPCQKGGVLSQLLQRDNTATLGSYAFSQHPAAGNLAEAPTPTSGSSSPCNIPKKRKPPPTPPSELDDLHKMVDQSEGLNSHDLPSREAANGLSSSPACGTRLLDFQPGNGLEFESRSNVKDPQGFNVLKQLLLSENGIKVLPGHRTLHNGSSASDRGSRPDRRLEGDRPTRFYSPSEQLNGNQNETVSAFEPARYLGILPAAGSSAHYAAENPASATVPAQSEPEHQAPSLGMPTEPPWLTKTNPILYYMLQRGGLGLVPSRARAGEGGAAEADRRRKPPPRQRAEQLGGGVGVLPSRRTVKAEPGEDSLAGLQGLAPGVPPDLNENARGILEKVAAIKREPD
SIO_010081: nrip1a
subclass of: SO_0000673
so part of: nrip1a
location: complement(7045492..7049208)
location: region:7045492-7049208:-1
so has part: feature:7045492-7049208:-1:exon

XP_048459223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7045492-7049208:-1:exon

nrip1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: nrip1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELCSEMHQDSVVLTYLESVLMHQASGGSMGTPSTKGTSEKEGAACKSSDIHCSGGGGGGAEGFVVSPSQQRASKAASTLNVKKARLLQAEACDGAKRRRVCGHGLQSNDQEGTAKQGELGKAQQQQHSTLLASLLQSFSSRLQNVALSQQAGAPRLSQAPSLGSPPEDDLRSYGLVSNHLRALLKNREPSQSEHLPKEPDGLYQSPAERPRFPSSPADHQGAAEPISCSARLRAVASMVENGARSNGSPKPSVACSQLALLLSSDTQLQQYTREHSLGARAPHPSASQRLAAIANQKVAEPSSPRDPARDHCSKDGHRRGASRGNPGVPEQSLRLAGHTRSPSGTREKSVGERDRSPLGPNNSSSLLMHLLNTNSIPKSSADASTETTNGHRWLGAERRGGPAFDYRLPAWEKPVKQEAGSLEETYSSDESSRSSCTPMDLSTKPRMCEPISLHSRSLEQMTESLLFSWNPKGPRVQSPEAKEDRNGPESKSHQKVTLLQLLLGHQNGARGNCTPEPQAPELKTERPSSIVTTPEASVAGIALSQRPRGPEHFPPSSSASSSSSSSSSSLSSSFQAAEQSAVVKVTRSPPAPAAHRLPPLCHASDGTHHLLARRGKLASSSEPSKTLQHFPQQLEAAKGHRALEPLLPSELAKAHQFPKHFASTELATNSQYVSRQPLTSESRLSNFSFSASKLLQDLAHTGFHKSPETSQADAEDKNVVLSSVETRMGESAESLTFSRSAKQSVLLEPRARRDRRPLQPGPVPSSDLESLLERRSVLQLLLKTPKKDKVPTATLHGRPGDHQTLAGPQPPGTQCNGQAADTEPISMVKVKTEPIEEEGGFPSTAEPMDQSANCQPLVPSKTEQKHPSFTLGSVKQEVASPAVPSSRAQCHPCQKGGVLSQLLQRDNTATLGSYAFSQHPAAGNLAEAPTPTSGSSSPCNIPKKRKPPPTPPSELDDLHKMVDQSEGLNSHDLPSREAANGLSSSPACGTRLLDFQPGNGLEFESRSNVKDPQGFNVLKQLLLSENGIKVLPGHRTLHNGSSASDRGSRPDRRLEGDRPTRFYSPSEQLNGNQNETVSAFEPARYLGILPAAGSSAHYAAENPASATVPAQSEPEHQAPSLGMPTEPPWLTKTNPILYYMLQRGGLGLVPSRARAGEGGAAEADRRRKPPPRQRAEQLGGGVGVLPSRRTVKAEPGEDSLAGLQGLAPGVPPDLNENARGILEKVAAIKREPD
SIO_010081: nrip1a
subclass of: SO_0000673
so part of: nrip1a
location: complement(7045492..7049208)
location: region:7045492-7049208:-1
so has part: feature:7045492-7049208:-1:exon

XP_048459224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7045492-7049208:-1:exon

zgc:153372
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: zgc:153372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7189802..7282275
location: region:7189802-7282275:1
so has part: feature:7189802-7282275:1:exon
subclass of: SO_0000010

109924595
type: Gene
SIO_000068: ncbigene

position:7189802:1
position: 7189802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7282275:1
position: 7282275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7189802-7282275:1:exon

zgc:153372
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zgc:153372
product: uncharacterized protein LOC767695 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602958.1
SIO_010081: zgc:153372
subclass of: SO_0000673
so part of: zgc:153372
location: join(7189802..7190053,7245071..7245134,7252525..7252655,7255577..7255727,7259675..7259811,7264348..7264417,7268699..7268780,7274868..7274999,7276576..7276718,7277553..7277675,7281577..7282275)
location: region:7189802-7282275:1
so has part: feature:7189802-7190053:1:exon
so has part: feature:7245071-7245134:1:exon
so has part: feature:7252525-7252655:1:exon
so has part: feature:7255577-7255727:1:exon
so has part: feature:7259675-7259811:1:exon
so has part: feature:7264348-7264417:1:exon
so has part: feature:7268699-7268780:1:exon
so has part: feature:7274868-7274999:1:exon
so has part: feature:7276576-7276718:1:exon
so has part: feature:7277553-7277675:1:exon
so has part: feature:7281577-7282275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7189802-7190053:1:exon

position:7190053:1
position: 7190053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7245071-7245134:1:exon

position:7245071:1
position: 7245071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7245134:1
position: 7245134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7252525-7252655:1:exon

position:7252525:1
position: 7252525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7252655:1
position: 7252655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7255577-7255727:1:exon

position:7255577:1
position: 7255577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7255727:1
position: 7255727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7259675-7259811:1:exon

position:7259675:1
position: 7259675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7259811:1
position: 7259811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7264348-7264417:1:exon

position:7264348:1
position: 7264348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7264417:1
position: 7264417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7268699-7268780:1:exon

position:7268699:1
position: 7268699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7268780:1
position: 7268780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7274868-7274999:1:exon

position:7274868:1
position: 7274868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7274999:1
position: 7274999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7276576-7276718:1:exon

position:7276576:1
position: 7276576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7276718:1
position: 7276718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7277553-7277675:1:exon

position:7277553:1
position: 7277553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7277675:1
position: 7277675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7281577-7282275:1:exon

position:7281577:1
position: 7281577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:153372
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zgc:153372
product: uncharacterized protein LOC767695 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602959.1
SIO_010081: zgc:153372
subclass of: SO_0000673
so part of: zgc:153372
location: join(7189803..7190053,7245034..7245134,7252525..7252655,7255577..7255727,7259675..7259811,7264348..7264417,7268699..7268780,7274868..7274999,7276576..7276718,7277553..7277675,7281577..7282275)
location: region:7189803-7282275:1
so has part: feature:7189803-7190053:1:exon
so has part: feature:7245034-7245134:1:exon
so has part: feature:7252525-7252655:1:exon
so has part: feature:7255577-7255727:1:exon
so has part: feature:7259675-7259811:1:exon
so has part: feature:7264348-7264417:1:exon
so has part: feature:7268699-7268780:1:exon
so has part: feature:7274868-7274999:1:exon
so has part: feature:7276576-7276718:1:exon
so has part: feature:7277553-7277675:1:exon
so has part: feature:7281577-7282275:1:exon

position:7189803:1
position: 7189803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7189803-7190053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7245034-7245134:1:exon

position:7245034:1
position: 7245034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7252525-7252655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7255577-7255727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7259675-7259811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7264348-7264417:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7268699-7268780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7274868-7274999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7276576-7276718:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7277553-7277675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7281577-7282275:1:exon

zgc:153372
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: zgc:153372
product: uncharacterized protein LOC767695 homolog, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602960.1
SIO_010081: zgc:153372
subclass of: SO_0000673
so part of: zgc:153372
location: join(7189803..7190053,7252525..7252655,7255577..7255727,7259675..7259811,7264348..7264417,7268699..7268780,7274868..7274999,7276576..7276718,7277553..7277675,7281577..7282275)
location: region:7189803-7282275:1
so has part: feature:7189803-7190053:1:exon
so has part: feature:7252525-7252655:1:exon
so has part: feature:7255577-7255727:1:exon
so has part: feature:7259675-7259811:1:exon
so has part: feature:7264348-7264417:1:exon
so has part: feature:7268699-7268780:1:exon
so has part: feature:7274868-7274999:1:exon
so has part: feature:7276576-7276718:1:exon
so has part: feature:7277553-7277675:1:exon
so has part: feature:7281577-7282275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7189803-7190053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7252525-7252655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7255577-7255727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7259675-7259811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7264348-7264417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7268699-7268780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7274868-7274999:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7276576-7276718:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7277553-7277675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7281577-7282275:1:exon

zgc:153372
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zgc:153372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arsenite methyltransferase isoform X1
translation: MSSSALIAATITRPQALTCTDMSQKDTSVQDQLKTYYGKRLKRSEDLQTDVACYKTCTPLSKSAADAMRLIHPEVTQRYFGCGLVVPESLERCHVLDLGSGSGRDCYILSKLVGPNGHVTGVDMTDELIQLSRKYISYHQEKFGYKETNTEFIQGYIEKLGEAGIQYNKFDVLVSNCVICLCPDKKAVFAEAYRALKEGGEMYFSDMYASEPVDEKLKEDSVLWGEGLAGALYWKDLISLVKELGFSTPYLVSASHIEIQKAELLRKTGDVKYASGTYRFFKLPFCGTDERALVTYKGTVTDHQEKLTFDSVHTFEKDKTVAVDGELALVLKISRFAPHFIVQPAECKVPVKDGAQQYCHLNPFQLADKLGSSIQKCSKTQKDGPCEDQTEATRKCVETKS
SIO_010081: zgc:153372
subclass of: SO_0000673
so part of: zgc:153372
location: join(7190016..7190053,7245071..7245134,7252525..7252655,7255577..7255727,7259675..7259811,7264348..7264417,7268699..7268780,7274868..7274999,7276576..7276718,7277553..7277675,7281577..7281711)
location: region:7190016-7281711:1
so has part: feature:7190016-7190053:1:exon
so has part: feature:7245071-7245134:1:exon
so has part: feature:7252525-7252655:1:exon
so has part: feature:7255577-7255727:1:exon
so has part: feature:7259675-7259811:1:exon
so has part: feature:7264348-7264417:1:exon
so has part: feature:7268699-7268780:1:exon
so has part: feature:7274868-7274999:1:exon
so has part: feature:7276576-7276718:1:exon
so has part: feature:7277553-7277675:1:exon
so has part: feature:7281577-7281711:1:exon

XP_048458915.1
type: Protein
SIO_000068: ncbiprotein

position:7190016:1
position: 7190016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7281711:1
position: 7281711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7190016-7190053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7245071-7245134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7252525-7252655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7255577-7255727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7259675-7259811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7264348-7264417:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7268699-7268780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7274868-7274999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7276576-7276718:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7277553-7277675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7281577-7281711:1:exon

zgc:153372
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zgc:153372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arsenite methyltransferase isoform X2
translation: MSQKDTSVQDQLKTYYGKRLKRSEDLQTDVACYKTCTPLSKSAADAMRLIHPEVTQRYFGCGLVVPESLERCHVLDLGSGSGRDCYILSKLVGPNGHVTGVDMTDELIQLSRKYISYHQEKFGYKETNTEFIQGYIEKLGEAGIQYNKFDVLVSNCVICLCPDKKAVFAEAYRALKEGGEMYFSDMYASEPVDEKLKEDSVLWGEGLAGALYWKDLISLVKELGFSTPYLVSASHIEIQKAELLRKTGDVKYASGTYRFFKLPFCGTDERALVTYKGTVTDHQEKLTFDSVHTFEKDKTVAVDGELALVLKISRFAPHFIVQPAECKVPVKDGAQQYCHLNPFQLADKLGSSIQKCSKTQKDGPCEDQTEATRKCVETKS
SIO_010081: zgc:153372
subclass of: SO_0000673
so part of: zgc:153372
location: join(7245096..7245134,7252525..7252655,7255577..7255727,7259675..7259811,7264348..7264417,7268699..7268780,7274868..7274999,7276576..7276718,7277553..7277675,7281577..7281711)
location: region:7245096-7281711:1
so has part: feature:7245096-7245134:1:exon
so has part: feature:7252525-7252655:1:exon
so has part: feature:7255577-7255727:1:exon
so has part: feature:7259675-7259811:1:exon
so has part: feature:7264348-7264417:1:exon
so has part: feature:7268699-7268780:1:exon
so has part: feature:7274868-7274999:1:exon
so has part: feature:7276576-7276718:1:exon
so has part: feature:7277553-7277675:1:exon
so has part: feature:7281577-7281711:1:exon

XP_048458916.1
type: Protein
SIO_000068: ncbiprotein

position:7245096:1
position: 7245096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7245096-7245134:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7252525-7252655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7255577-7255727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7259675-7259811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7264348-7264417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7268699-7268780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7274868-7274999:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7276576-7276718:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7277553-7277675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7281577-7281711:1:exon

zgc:153372
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: zgc:153372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arsenite methyltransferase isoform X3
translation: MRLIHPEVTQRYFGCGLVVPESLERCHVLDLGSGSGRDCYILSKLVGPNGHVTGVDMTDELIQLSRKYISYHQEKFGYKETNTEFIQGYIEKLGEAGIQYNKFDVLVSNCVICLCPDKKAVFAEAYRALKEGGEMYFSDMYASEPVDEKLKEDSVLWGEGLAGALYWKDLISLVKELGFSTPYLVSASHIEIQKAELLRKTGDVKYASGTYRFFKLPFCGTDERALVTYKGTVTDHQEKLTFDSVHTFEKDKTVAVDGELALVLKISRFAPHFIVQPAECKVPVKDGAQQYCHLNPFQLADKLGSSIQKCSKTQKDGPCEDQTEATRKCVETKS
SIO_010081: zgc:153372
subclass of: SO_0000673
so part of: zgc:153372
location: join(7252624..7252655,7255577..7255727,7259675..7259811,7264348..7264417,7268699..7268780,7274868..7274999,7276576..7276718,7277553..7277675,7281577..7281711)
location: region:7252624-7281711:1
so has part: feature:7252624-7252655:1:exon
so has part: feature:7255577-7255727:1:exon
so has part: feature:7259675-7259811:1:exon
so has part: feature:7264348-7264417:1:exon
so has part: feature:7268699-7268780:1:exon
so has part: feature:7274868-7274999:1:exon
so has part: feature:7276576-7276718:1:exon
so has part: feature:7277553-7277675:1:exon
so has part: feature:7281577-7281711:1:exon

XP_048458917.1
type: Protein
SIO_000068: ncbiprotein

position:7252624:1
position: 7252624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7252624-7252655:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7255577-7255727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7259675-7259811:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7264348-7264417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7268699-7268780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7274868-7274999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7276576-7276718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7277553-7277675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7281577-7281711:1:exon

usp25
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7285708..7448881
location: region:7285708-7448881:1
so has part: feature:7285708-7448881:1:exon
subclass of: SO_0000010

109937189
type: Gene
SIO_000068: ncbigene

position:7285708:1
position: 7285708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7448881:1
position: 7448881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285708-7448881:1:exon

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602648.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285708..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379685..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7400313..7400426,7402733..7402828,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448881)
location: region:7285708-7448881:1
so has part: feature:7285708-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379685-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7400313-7400426:1:exon
so has part: feature:7402733-7402828:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7285708-7285798:1:exon

position:7285798:1
position: 7285798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

position:7314789:1
position: 7314789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7314866:1
position: 7314866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

position:7322033:1
position: 7322033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7322174:1
position: 7322174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

position:7329290:1
position: 7329290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7329413:1
position: 7329413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

position:7341278:1
position: 7341278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7341440:1
position: 7341440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

position:7351789:1
position: 7351789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7351875:1
position: 7351875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

position:7359292:1
position: 7359292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7359429:1
position: 7359429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

position:7360834:1
position: 7360834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7360910:1
position: 7360910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

position:7366547:1
position: 7366547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7366620:1
position: 7366620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

position:7368251:1
position: 7368251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7368408:1
position: 7368408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

position:7375480:1
position: 7375480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7375607:1
position: 7375607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

position:7376501:1
position: 7376501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7376596:1
position: 7376596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

position:7378495:1
position: 7378495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7378662:1
position: 7378662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7379685-7379896:1:exon

position:7379685:1
position: 7379685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7379896:1
position: 7379896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

position:7389385:1
position: 7389385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7389455:1
position: 7389455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

position:7389905:1
position: 7389905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7390133:1
position: 7390133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

position:7391709:1
position: 7391709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7391909:1
position: 7391909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

position:7394524:1
position: 7394524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7394657:1
position: 7394657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7400313-7400426:1:exon

position:7400313:1
position: 7400313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7400426:1
position: 7400426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7402733-7402828:1:exon

position:7402733:1
position: 7402733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7402828:1
position: 7402828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7411778-7411956:1:exon

position:7411778:1
position: 7411778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7411956:1
position: 7411956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7417122-7417200:1:exon

position:7417122:1
position: 7417122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7417200:1
position: 7417200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7425862-7425941:1:exon

position:7425862:1
position: 7425862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7425941:1
position: 7425941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7441492-7441615:1:exon

position:7441492:1
position: 7441492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7441615:1
position: 7441615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7443059-7443254:1:exon

position:7443059:1
position: 7443059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7443254:1
position: 7443254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7448034-7448881:1:exon

position:7448034:1
position: 7448034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602650.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285708..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379685..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7402733..7402828,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448881)
location: region:7285708-7448881:1
so has part: feature:7285708-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379685-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7402733-7402828:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7285708-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379685-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7402733-7402828:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7448034-7448881:1:exon

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602652.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285708..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379685..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448881)
location: region:7285708-7448881:1
so has part: feature:7285708-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379685-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7285708-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379685-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7448034-7448881:1:exon

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602649.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285708..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379688..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7400313..7400426,7402733..7402828,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448881)
location: region:7285708-7448881:1
so has part: feature:7285708-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379688-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7400313-7400426:1:exon
so has part: feature:7402733-7402828:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7285708-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379688-7379896:1:exon

position:7379688:1
position: 7379688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7400313-7400426:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7402733-7402828:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7448034-7448881:1:exon

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602651.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285708..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379688..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7402733..7402828,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448881)
location: region:7285708-7448881:1
so has part: feature:7285708-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379688-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7402733-7402828:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7285708-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379688-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7402733-7402828:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7448034-7448881:1:exon

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602653.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285708..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379688..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448881)
location: region:7285708-7448881:1
so has part: feature:7285708-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379688-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7285708-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379688-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7448034-7448881:1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X1
translation: MTVEQNVLQQHSQKHQQTLLNQLREVTGTNDIQLLQQALQASNGDLAEAVSFLTEKNAKAPQQEEAYFHTGQTSNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTQGEVWSDSINPYDRKRQESCPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYVPPTDPQDVPQNQKERRNLPFMRELRHLFALMVSSKRKYVDPSRAVEILKDTFKSNDLQQQDVSEFTHKLLDWLEDAFQVKTEEERDGEKPKNPMVELFYGRFLAVGMHEGKKFENSEMFGQYPLQVNGFKDLHECLEAAMVEGEIESLQAENSTNSAKSGQEHWFTALPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRIKREEIRRLKDHLTVLQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPVDDVETAPPNSTTAPQTTVRQESSPMDQGPLAATDAPCTPPLQRSVVHKPFTQSRVPPEIPMHPAPRHITEDELRVLEGCLHRWRMEVENDTRDLQESIARLHRTIDLMYTDKTMMQVPYRLHAVLVHEGQANAGHYWAYIHDHHQGRWMKYNDIAVTKSSWEELERDSFGGYRNASAYCLMYINDTERYLIEEEFDKETGQVLTGMNTLPCDLKEYVRDDNRKFEKELQEWDAQQEKKAQQEKMEIHTTQREPHGASTSGKELEYLEQPSAKDLSNVCEGDTARTVTKAATEYDDRGPEAALQAASAAASPKPGPSQRVVEVEIPQIGRLVIESEEGGYDDEVMLTPTMQGIIMAIGKARNVYDRHGPEAGFFKAFTAEYSRLVRLAQEDTTLENDNRLKHVVVYFLHNEAPKKIIERTLLEQFADRNLNFDERCRSVMKIARAKLELIKPKEVNMEEYEKWHHEYRTFREISICIMIGLELFQKKSYNEALMYLIHAYQYNKELLSKGIYRGHDEELMSHYRRECLLKLNEHAAALFESGDDQDVEEGLTTMNELVVPCLPLLLVDEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKAFREPPKLPSFSTHELCERFARVMASLSRTPADGR
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285757..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379685..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7400313..7400426,7402733..7402828,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448206)
location: region:7285757-7448206:1
so has part: feature:7285757-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379685-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7400313-7400426:1:exon
so has part: feature:7402733-7402828:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448206:1:exon

XP_048458605.1
type: Protein
SIO_000068: ncbiprotein

position:7285757:1
position: 7285757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7448206:1
position: 7448206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285757-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379685-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7400313-7400426:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7402733-7402828:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7448034-7448206:1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X3
translation: MTVEQNVLQQHSQKHQQTLLNQLREVTGTNDIQLLQQALQASNGDLAEAVSFLTEKNAKAPQQEEAYFHTGQTSNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTQGEVWSDSINPYDRKRQESCPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYVPPTDPQDVPQNQKERRNLPFMRELRHLFALMVSSKRKYVDPSRAVEILKDTFKSNDLQQQDVSEFTHKLLDWLEDAFQVKTEEERDGEKPKNPMVELFYGRFLAVGMHEGKKFENSEMFGQYPLQVNGFKDLHECLEAAMVEGEIESLQAENSTNSAKSGQEHWFTALPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRIKREEIRRLKDHLTVLQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPVDDVETAPPNSTTAPQTTVRQESSPMDQGPLAATDAPCTPPLQRSVVHKPFTQSRVPPEIPMHPAPRHITEDELRVLEGCLHRWRMEVENDTRDLQESIARLHRTIDLMYTDKTMMQVPYRLHAVLVHEGQANAGHYWAYIHDHHQGRWMKYNDIAVTKSSWEELERDSFGGYRNASAYCLMYINDTERYLIEEEFDKETGQVLTGMNTLPCDLKEYVRDDNRKFEKELQEWDAQQEKKAQQEKMEIHTTQREPHGASTSGKELEYLEQPSAKDLSNVCEGDTARTVTKAATEYDDRGPEAALQAVMLTPTMQGIIMAIGKARNVYDRHGPEAGFFKAFTAEYSRLVRLAQEDTTLENDNRLKHVVVYFLHNEAPKKIIERTLLEQFADRNLNFDERCRSVMKIARAKLELIKPKEVNMEEYEKWHHEYRTFREISICIMIGLELFQKKSYNEALMYLIHAYQYNKELLSKGIYRGHDEELMSHYRRECLLKLNEHAAALFESGDDQDVEEGLTTMNELVVPCLPLLLVDEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKAFREPPKLPSFSTHELCERFARVMASLSRTPADGR
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285757..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379685..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7402733..7402828,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448206)
location: region:7285757-7448206:1
so has part: feature:7285757-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379685-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7402733-7402828:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448206:1:exon

XP_048458607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7285757-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379685-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7402733-7402828:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7448034-7448206:1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X5
translation: MTVEQNVLQQHSQKHQQTLLNQLREVTGTNDIQLLQQALQASNGDLAEAVSFLTEKNAKAPQQEEAYFHTGQTSNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTQGEVWSDSINPYDRKRQESCPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYVPPTDPQDVPQNQKERRNLPFMRELRHLFALMVSSKRKYVDPSRAVEILKDTFKSNDLQQQDVSEFTHKLLDWLEDAFQVKTEEERDGEKPKNPMVELFYGRFLAVGMHEGKKFENSEMFGQYPLQVNGFKDLHECLEAAMVEGEIESLQAENSTNSAKSGQEHWFTALPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRIKREEIRRLKDHLTVLQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPVDDVETAPPNSTTAPQTTVRQESSPMDQGPLAATDAPCTPPLQRSVVHKPFTQSRVPPEIPMHPAPRHITEDELRVLEGCLHRWRMEVENDTRDLQESIARLHRTIDLMYTDKTMMQVPYRLHAVLVHEGQANAGHYWAYIHDHHQGRWMKYNDIAVTKSSWEELERDSFGGYRNASAYCLMYINDTERYLIEEEFDKETGQVLTGMNTLPCDLKEYVRDDNRKFEKELQEWDAQQEKKAQQEKMEIHTTQREPHGASTSGKELEYLEQPSAKDLSNVCEGDTARTVTKAATEYDDRGPEAALQAAFTAEYSRLVRLAQEDTTLENDNRLKHVVVYFLHNEAPKKIIERTLLEQFADRNLNFDERCRSVMKIARAKLELIKPKEVNMEEYEKWHHEYRTFREISICIMIGLELFQKKSYNEALMYLIHAYQYNKELLSKGIYRGHDEELMSHYRRECLLKLNEHAAALFESGDDQDVEEGLTTMNELVVPCLPLLLVDEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKAFREPPKLPSFSTHELCERFARVMASLSRTPADGR
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285757..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379685..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448206)
location: region:7285757-7448206:1
so has part: feature:7285757-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379685-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448206:1:exon

XP_048458609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7285757-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379685-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7448034-7448206:1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X2
translation: MTVEQNVLQQHSQKHQQTLLNQLREVTGTNDIQLLQQALQASNGDLAEAVSFLTEKNAKAPQQEEAYFHTGQTSNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTQGEVWSDSINPYDRKRQESCPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYVPPTDPQDVPQNQKERRNLPFMRELRHLFALMVSSKRKYVDPSRAVEILKDTFKSNDLQQQDVSEFTHKLLDWLEDAFQVKTEEERDGEKPKNPMVELFYGRFLAVGMHEGKKFENSEMFGQYPLQVNGFKDLHECLEAAMVEGEIESLQAENSTNSAKSGQEHWFTALPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRIKREEIRRLKDHLTVLQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPVDDVETAPPNSTTAPQTTVRQESPMDQGPLAATDAPCTPPLQRSVVHKPFTQSRVPPEIPMHPAPRHITEDELRVLEGCLHRWRMEVENDTRDLQESIARLHRTIDLMYTDKTMMQVPYRLHAVLVHEGQANAGHYWAYIHDHHQGRWMKYNDIAVTKSSWEELERDSFGGYRNASAYCLMYINDTERYLIEEEFDKETGQVLTGMNTLPCDLKEYVRDDNRKFEKELQEWDAQQEKKAQQEKMEIHTTQREPHGASTSGKELEYLEQPSAKDLSNVCEGDTARTVTKAATEYDDRGPEAALQAASAAASPKPGPSQRVVEVEIPQIGRLVIESEEGGYDDEVMLTPTMQGIIMAIGKARNVYDRHGPEAGFFKAFTAEYSRLVRLAQEDTTLENDNRLKHVVVYFLHNEAPKKIIERTLLEQFADRNLNFDERCRSVMKIARAKLELIKPKEVNMEEYEKWHHEYRTFREISICIMIGLELFQKKSYNEALMYLIHAYQYNKELLSKGIYRGHDEELMSHYRRECLLKLNEHAAALFESGDDQDVEEGLTTMNELVVPCLPLLLVDEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKAFREPPKLPSFSTHELCERFARVMASLSRTPADGR
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285757..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379688..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7400313..7400426,7402733..7402828,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448206)
location: region:7285757-7448206:1
so has part: feature:7285757-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379688-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7400313-7400426:1:exon
so has part: feature:7402733-7402828:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448206:1:exon

XP_048458606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7285757-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379688-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7400313-7400426:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7402733-7402828:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7448034-7448206:1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X4
translation: MTVEQNVLQQHSQKHQQTLLNQLREVTGTNDIQLLQQALQASNGDLAEAVSFLTEKNAKAPQQEEAYFHTGQTSNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTQGEVWSDSINPYDRKRQESCPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYVPPTDPQDVPQNQKERRNLPFMRELRHLFALMVSSKRKYVDPSRAVEILKDTFKSNDLQQQDVSEFTHKLLDWLEDAFQVKTEEERDGEKPKNPMVELFYGRFLAVGMHEGKKFENSEMFGQYPLQVNGFKDLHECLEAAMVEGEIESLQAENSTNSAKSGQEHWFTALPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRIKREEIRRLKDHLTVLQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPVDDVETAPPNSTTAPQTTVRQESPMDQGPLAATDAPCTPPLQRSVVHKPFTQSRVPPEIPMHPAPRHITEDELRVLEGCLHRWRMEVENDTRDLQESIARLHRTIDLMYTDKTMMQVPYRLHAVLVHEGQANAGHYWAYIHDHHQGRWMKYNDIAVTKSSWEELERDSFGGYRNASAYCLMYINDTERYLIEEEFDKETGQVLTGMNTLPCDLKEYVRDDNRKFEKELQEWDAQQEKKAQQEKMEIHTTQREPHGASTSGKELEYLEQPSAKDLSNVCEGDTARTVTKAATEYDDRGPEAALQAVMLTPTMQGIIMAIGKARNVYDRHGPEAGFFKAFTAEYSRLVRLAQEDTTLENDNRLKHVVVYFLHNEAPKKIIERTLLEQFADRNLNFDERCRSVMKIARAKLELIKPKEVNMEEYEKWHHEYRTFREISICIMIGLELFQKKSYNEALMYLIHAYQYNKELLSKGIYRGHDEELMSHYRRECLLKLNEHAAALFESGDDQDVEEGLTTMNELVVPCLPLLLVDEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKAFREPPKLPSFSTHELCERFARVMASLSRTPADGR
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285757..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379688..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7402733..7402828,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448206)
location: region:7285757-7448206:1
so has part: feature:7285757-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379688-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7402733-7402828:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448206:1:exon

XP_048458608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7285757-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379688-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7402733-7402828:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7448034-7448206:1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X6
translation: MTVEQNVLQQHSQKHQQTLLNQLREVTGTNDIQLLQQALQASNGDLAEAVSFLTEKNAKAPQQEEAYFHTGQTSNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTQGEVWSDSINPYDRKRQESCPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYVPPTDPQDVPQNQKERRNLPFMRELRHLFALMVSSKRKYVDPSRAVEILKDTFKSNDLQQQDVSEFTHKLLDWLEDAFQVKTEEERDGEKPKNPMVELFYGRFLAVGMHEGKKFENSEMFGQYPLQVNGFKDLHECLEAAMVEGEIESLQAENSTNSAKSGQEHWFTALPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRIKREEIRRLKDHLTVLQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPVDDVETAPPNSTTAPQTTVRQESPMDQGPLAATDAPCTPPLQRSVVHKPFTQSRVPPEIPMHPAPRHITEDELRVLEGCLHRWRMEVENDTRDLQESIARLHRTIDLMYTDKTMMQVPYRLHAVLVHEGQANAGHYWAYIHDHHQGRWMKYNDIAVTKSSWEELERDSFGGYRNASAYCLMYINDTERYLIEEEFDKETGQVLTGMNTLPCDLKEYVRDDNRKFEKELQEWDAQQEKKAQQEKMEIHTTQREPHGASTSGKELEYLEQPSAKDLSNVCEGDTARTVTKAATEYDDRGPEAALQAAFTAEYSRLVRLAQEDTTLENDNRLKHVVVYFLHNEAPKKIIERTLLEQFADRNLNFDERCRSVMKIARAKLELIKPKEVNMEEYEKWHHEYRTFREISICIMIGLELFQKKSYNEALMYLIHAYQYNKELLSKGIYRGHDEELMSHYRRECLLKLNEHAAALFESGDDQDVEEGLTTMNELVVPCLPLLLVDEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKAFREPPKLPSFSTHELCERFARVMASLSRTPADGR
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: join(7285757..7285798,7314789..7314866,7322033..7322174,7329290..7329413,7341278..7341440,7351789..7351875,7359292..7359429,7360834..7360910,7366547..7366620,7368251..7368408,7375480..7375607,7376501..7376596,7378495..7378662,7379688..7379896,7389385..7389455,7389905..7390133,7391709..7391909,7394524..7394657,7411778..7411956,7417122..7417200,7425862..7425941,7441492..7441615,7443059..7443254,7448034..7448206)
location: region:7285757-7448206:1
so has part: feature:7285757-7285798:1:exon
so has part: feature:7314789-7314866:1:exon
so has part: feature:7322033-7322174:1:exon
so has part: feature:7329290-7329413:1:exon
so has part: feature:7341278-7341440:1:exon
so has part: feature:7351789-7351875:1:exon
so has part: feature:7359292-7359429:1:exon
so has part: feature:7360834-7360910:1:exon
so has part: feature:7366547-7366620:1:exon
so has part: feature:7368251-7368408:1:exon
so has part: feature:7375480-7375607:1:exon
so has part: feature:7376501-7376596:1:exon
so has part: feature:7378495-7378662:1:exon
so has part: feature:7379688-7379896:1:exon
so has part: feature:7389385-7389455:1:exon
so has part: feature:7389905-7390133:1:exon
so has part: feature:7391709-7391909:1:exon
so has part: feature:7394524-7394657:1:exon
so has part: feature:7411778-7411956:1:exon
so has part: feature:7417122-7417200:1:exon
so has part: feature:7425862-7425941:1:exon
so has part: feature:7441492-7441615:1:exon
so has part: feature:7443059-7443254:1:exon
so has part: feature:7448034-7448206:1:exon

XP_048458610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7285757-7285798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7314789-7314866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322033-7322174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329290-7329413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7341278-7341440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7351789-7351875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7359292-7359429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7360834-7360910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7366547-7366620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368251-7368408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7375480-7375607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7376501-7376596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7378495-7378662:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7379688-7379896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7389385-7389455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7389905-7390133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7391709-7391909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7394524-7394657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7411778-7411956:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7417122-7417200:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7425862-7425941:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7441492-7441615:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7443059-7443254:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7448034-7448206:1:exon

LOC109918524
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109918524
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7537758..7704495
location: region:7537758-7704495:1
so has part: feature:7537758-7704495:1:exon
subclass of: SO_0000011

109918524
type: Gene
SIO_000068: ncbigene

position:7537758:1
position: 7537758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7704495:1
position: 7704495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7537758-7704495:1:exon

LOC109918524
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109918524
product: uncharacterized LOC109918524, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007263250.1
SIO_010081: LOC109918524
subclass of: SO_0000673
so part of: LOC109918524
location: join(7537758..7538402,7562437..7562492,7672451..7672526,7704411..7704495)
location: region:7537758-7704495:1
so has part: feature:7537758-7538402:1:exon
so has part: feature:7562437-7562492:1:exon
so has part: feature:7672451-7672526:1:exon
so has part: feature:7704411-7704495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7537758-7538402:1:exon

position:7538402:1
position: 7538402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7562437-7562492:1:exon

position:7562437:1
position: 7562437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7562492:1
position: 7562492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7672451-7672526:1:exon

position:7672451:1
position: 7672451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7672526:1
position: 7672526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7704411-7704495:1:exon

position:7704411:1
position: 7704411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109918524
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC109918524
product: uncharacterized LOC109918524, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263251.1
SIO_010081: LOC109918524
subclass of: SO_0000673
so part of: LOC109918524
location: join(7537758..7538402,7562437..7562492,7596071..7596486)
location: region:7537758-7596486:1
so has part: feature:7537758-7538402:1:exon
so has part: feature:7562437-7562492:1:exon
so has part: feature:7596071-7596486:1:exon

position:7596486:1
position: 7596486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7537758-7538402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7562437-7562492:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7596071-7596486:1:exon

position:7596071:1
position: 7596071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484430
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484430
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7765717..7805622
location: region:7765717-7805622:1
so has part: feature:7765717-7805622:1:exon
subclass of: SO_0000011

125484430
type: Gene
SIO_000068: ncbigene

position:7765717:1
position: 7765717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7805622:1
position: 7805622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7765717-7805622:1:exon

LOC125484430
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484430
product: uncharacterized LOC125484430, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263253.1
SIO_010081: LOC125484430
subclass of: SO_0000673
so part of: LOC125484430
location: join(7765717..7765818,7803272..7805622)
location: region:7765717-7805622:1
so has part: feature:7765717-7765818:1:exon
so has part: feature:7803272-7805622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7765717-7765818:1:exon

position:7765818:1
position: 7765818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7803272-7805622:1:exon

position:7803272:1
position: 7803272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484430
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484430
product: uncharacterized LOC125484430, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263252.1
SIO_010081: LOC125484430
subclass of: SO_0000673
so part of: LOC125484430
location: join(7796529..7798575,7803272..7805622)
location: region:7796529-7805622:1
so has part: feature:7796529-7798575:1:exon
so has part: feature:7803272-7805622:1:exon

position:7796529:1
position: 7796529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7796529-7798575:1:exon

position:7798575:1
position: 7798575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7803272-7805622:1:exon

cxadr
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: cxadr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7902543..8016809
location: region:7902543-8016809:1
so has part: feature:7902543-8016809:1:exon
subclass of: SO_0000010

109932775
type: Gene
SIO_000068: ncbigene

position:7902543:1
position: 7902543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8016809:1
position: 8016809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7902543-8016809:1:exon

cxadr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cxadr
product: CXADR Ig-like cell adhesion molecule, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602833.1
SIO_010081: cxadr
subclass of: SO_0000673
so part of: cxadr
location: join(7902543..7902618,7980884..7981050,7981925..7982129,7985252..7985404,7987332..7987454,7992330..7992468,7997142..7997331,8014948..8016809)
location: region:7902543-8016809:1
so has part: feature:7902543-7902618:1:exon
so has part: feature:7980884-7981050:1:exon
so has part: feature:7981925-7982129:1:exon
so has part: feature:7985252-7985404:1:exon
so has part: feature:7987332-7987454:1:exon
so has part: feature:7992330-7992468:1:exon
so has part: feature:7997142-7997331:1:exon
so has part: feature:8014948-8016809:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7902543-7902618:1:exon

position:7902618:1
position: 7902618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7980884-7981050:1:exon

position:7980884:1
position: 7980884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7981050:1
position: 7981050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7981925-7982129:1:exon

position:7981925:1
position: 7981925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7982129:1
position: 7982129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7985252-7985404:1:exon

position:7985252:1
position: 7985252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7985404:1
position: 7985404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7987332-7987454:1:exon

position:7987332:1
position: 7987332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7987454:1
position: 7987454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7992330-7992468:1:exon

position:7992330:1
position: 7992330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7992468:1
position: 7992468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7997142-7997331:1:exon

position:7997142:1
position: 7997142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7997331:1
position: 7997331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8014948-8016809:1:exon

position:8014948:1
position: 8014948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cxadr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: cxadr
product: CXADR Ig-like cell adhesion molecule, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602832.1
SIO_010081: cxadr
subclass of: SO_0000673
so part of: cxadr
location: join(7902543..7902618,7980884..7981050,7981925..7982129,7985252..7985404,7987332..7987454,7992330..7992468,7997142..8001455)
location: region:7902543-8001455:1
so has part: feature:7902543-7902618:1:exon
so has part: feature:7980884-7981050:1:exon
so has part: feature:7981925-7982129:1:exon
so has part: feature:7985252-7985404:1:exon
so has part: feature:7987332-7987454:1:exon
so has part: feature:7992330-7992468:1:exon
so has part: feature:7997142-8001455:1:exon

position:8001455:1
position: 8001455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7902543-7902618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7980884-7981050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7981925-7982129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7985252-7985404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7987332-7987454:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7992330-7992468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7997142-8001455:1:exon

cxadr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cxadr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coxsackievirus and adenovirus receptor homolog isoform X2
translation: MDTKQSALVTLSLLCLLTGWSQELTILPTADRKEAGDGDSVMLECRFELDKTDIGPLDIEWSKTPNDPADSPIIVIDYSGDRTYETRLEDMKGRVHFSSPDPKNGDASINITRLRLSDSGRYHCKVKKSPGSKTISITLDVMMRPSDLRCYVDGNHEVGKDAMLKCSSQGTPPITYTWTRQGPSNLMPPSAVADVVSGTLKLKNATADYSGDYACTARNRVDSSQCVVRLSVTSSSNNAGKIAGAIIGVLLALLLLAIIVWCCLRRKKQKTYEKEQPYEIREDVPAPKSRVSTARSYTVGSQRSSLGSMSPSNMEPYKTHYDRLATNDVEYLPNHSPNINPSYKEYGQRAEERSQGYNSMSIV
SIO_010081: cxadr
subclass of: SO_0000673
so part of: cxadr
location: join(7902564..7902618,7980884..7981050,7981925..7982129,7985252..7985404,7987332..7987454,7992330..7992468,7997142..7997331,8014948..8015007)
location: region:7902564-8015007:1
so has part: feature:7902564-7902618:1:exon
so has part: feature:7980884-7981050:1:exon
so has part: feature:7981925-7982129:1:exon
so has part: feature:7985252-7985404:1:exon
so has part: feature:7987332-7987454:1:exon
so has part: feature:7992330-7992468:1:exon
so has part: feature:7997142-7997331:1:exon
so has part: feature:8014948-8015007:1:exon

XP_048458790.1
type: Protein
SIO_000068: ncbiprotein

position:7902564:1
position: 7902564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8015007:1
position: 8015007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7902564-7902618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7980884-7981050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7981925-7982129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7985252-7985404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7987332-7987454:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7992330-7992468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7997142-7997331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8014948-8015007:1:exon

cxadr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: cxadr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coxsackievirus and adenovirus receptor homolog isoform X1
translation: MDTKQSALVTLSLLCLLTGWSQELTILPTADRKEAGDGDSVMLECRFELDKTDIGPLDIEWSKTPNDPADSPIIVIDYSGDRTYETRLEDMKGRVHFSSPDPKNGDASINITRLRLSDSGRYHCKVKKSPGSKTISITLDVMMRPSDLRCYVDGNHEVGKDAMLKCSSQGTPPITYTWTRQGPSNLMPPSAVADVVSGTLKLKNATADYSGDYACTARNRVDSSQCVVRLSVTSSSNNAGKIAGAIIGVLLALLLLAIIVWCCLRRKKQKTYEKEQPYEIREDVPAPKSRVSTARSYTVGSQRSSLGSMSPSNMEPYKTHYDRLATNDVEYLPNHSPNINPSYKVAAPSLNRMGAVPVMIPAQHRDGSIV
SIO_010081: cxadr
subclass of: SO_0000673
so part of: cxadr
location: join(7902564..7902618,7980884..7981050,7981925..7982129,7985252..7985404,7987332..7987454,7992330..7992468,7997142..7997412)
location: region:7902564-7997412:1
so has part: feature:7902564-7902618:1:exon
so has part: feature:7980884-7981050:1:exon
so has part: feature:7981925-7982129:1:exon
so has part: feature:7985252-7985404:1:exon
so has part: feature:7987332-7987454:1:exon
so has part: feature:7992330-7992468:1:exon
so has part: feature:7997142-7997412:1:exon

XP_048458789.1
type: Protein
SIO_000068: ncbiprotein

position:7997412:1
position: 7997412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7902564-7902618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7980884-7981050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7981925-7982129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7985252-7985404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7987332-7987454:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7992330-7992468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7997142-7997412:1:exon

c11h21orf91
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: c11h21orf91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8034937..8082244
location: region:8034937-8082244:1
so has part: feature:8034937-8082244:1:exon
subclass of: SO_0000010

109911680
type: Gene
SIO_000068: ncbigene

position:8034937:1
position: 8034937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8082244:1
position: 8082244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8034937-8082244:1:exon

c11h21orf91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: c11h21orf91
product: chromosome 11 C21orf91 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020511041.2
SIO_010081: c11h21orf91
subclass of: SO_0000673
so part of: c11h21orf91
location: join(8034937..8035169,8051967..8052097,8070343..8070885,8075102..8075164,8077388..8082244)
location: region:8034937-8082244:1
so has part: feature:8034937-8035169:1:exon
so has part: feature:8051967-8052097:1:exon
so has part: feature:8070343-8070885:1:exon
so has part: feature:8075102-8075164:1:exon
so has part: feature:8077388-8082244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8034937-8035169:1:exon

position:8035169:1
position: 8035169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8051967-8052097:1:exon

position:8051967:1
position: 8051967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8052097:1
position: 8052097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8070343-8070885:1:exon

position:8070343:1
position: 8070343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8070885:1
position: 8070885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8075102-8075164:1:exon

position:8075102:1
position: 8075102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8075164:1
position: 8075164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8077388-8082244:1:exon

position:8077388:1
position: 8077388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c11h21orf91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: c11h21orf91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein EURL homolog
translation: MNEEQFVNIDLNDDDICSVCKLETAKELLSFCHVCFELSIEGVARENLLHTESVHGHRECFEKFHLIANQDLPQPRVSKSTYRDVKEILSRKISRIIQYAQNQHSRPDLRECGQEQVKGHDHQPSALRTHFPQVNGLQLPRYSPRWLNGSSPGYSKCGQGILEQDVPSDFRQGMLGVAVDRFRGLDVHWPPKERGHGAESPLAAGNHSRVEASCHRHYTREELSAMSVDDLVPLNEQLLKQIKVVFEDLAQELEKKDSLSSELHVRYIAIEQLFKNREKLPWLRVGQGGIKPNAPLDN
SIO_010081: c11h21orf91
subclass of: SO_0000673
so part of: c11h21orf91
location: join(8051974..8052097,8070343..8070885,8075102..8075164,8077388..8077554)
location: region:8051974-8077554:1
so has part: feature:8051974-8052097:1:exon
so has part: feature:8070343-8070885:1:exon
so has part: feature:8075102-8075164:1:exon
so has part: feature:8077388-8077554:1:exon

XP_020366630.1
type: Protein
SIO_000068: ncbiprotein

position:8051974:1
position: 8051974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8077554:1
position: 8077554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8051974-8052097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8070343-8070885:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8075102-8075164:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8077388-8077554:1:exon

LOC125484485
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484485
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8086744..8086871
location: region:8086744-8086871:1
so has part: feature:8086744-8086871:1:exon
subclass of: SO_0000623

125484485
type: Gene
SIO_000068: ncbigene

position:8086744:1
position: 8086744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8086871:1
position: 8086871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8086744-8086871:1:exon

LOC125484485
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: snRNA
gene: LOC125484485
product: U6atac minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007263328.1
SIO_010081: LOC125484485
subclass of: SO_0000673
so part of: LOC125484485
location: 8086744..8086871
location: region:8086744-8086871:1
so has part: feature:8086744-8086871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8086744-8086871:1:exon

LOC109911677
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109911677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8117348..8128296
location: region:8117348-8128296:1
so has part: feature:8117348-8128296:1:exon
subclass of: SO_0000010

109911677
type: Gene
SIO_000068: ncbigene

position:8117348:1
position: 8117348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8128296:1
position: 8128296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8117348-8128296:1:exon

LOC109911677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109911677
product: E3 ubiquitin/ISG15 ligase TRIM25-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048602835.1
SIO_010081: LOC109911677
subclass of: SO_0000673
so part of: LOC109911677
location: join(8117348..8117911,8118070..8118165,8119761..8119991,8123835..8123857,8128206..8128296)
location: region:8117348-8128296:1
so has part: feature:8117348-8117911:1:exon
so has part: feature:8118070-8118165:1:exon
so has part: feature:8119761-8119991:1:exon
so has part: feature:8123835-8123857:1:exon
so has part: feature:8128206-8128296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8117348-8117911:1:exon

position:8117911:1
position: 8117911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8118070-8118165:1:exon

position:8118070:1
position: 8118070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8118165:1
position: 8118165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8119761-8119991:1:exon

position:8119761:1
position: 8119761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8119991:1
position: 8119991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8123835-8123857:1:exon

position:8123835:1
position: 8123835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8123857:1
position: 8123857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8128206-8128296:1:exon

position:8128206:1
position: 8128206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109911677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109911677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like
translation: MESGAFEEELTCSVCLQVYQDPVILPCQHSFCFQCINKAWKHVTNQLGVSCPECRRTFKPRPQLKKNFTLRNIVEKYNQSQVTAAESTPVMCEYCIENPSPAVKTCLKCETSFCSLHLKPHLTKKTYQDHILIEPLDDLTKKQCLDHKKILEFYCEQDEQCVCISCTVIGRHKSHNLLSLDQAEATVKDKLKKECGDLHEIQKNASIDQENLKKAESEIKTRSNELKEKLSDKFTEWRKQLEEDEKYALKLINDEENRVLSEIRSKSKSLEQKMEQIKLIDTETEKQMKMDCLSFLQESKQLFTKISQIRGDMGAVDDYNTPLQQKTSR
SIO_010081: LOC109911677
subclass of: SO_0000673
so part of: LOC109911677
location: join(8117348..8117911,8118070..8118165,8119761..8119991,8123835..8123857,8128206..8128281)
location: region:8117348-8128281:1
so has part: feature:8117348-8117911:1:exon
so has part: feature:8118070-8118165:1:exon
so has part: feature:8119761-8119991:1:exon
so has part: feature:8123835-8123857:1:exon
so has part: feature:8128206-8128281:1:exon

XP_048458792.1
type: Protein
SIO_000068: ncbiprotein

position:8128281:1
position: 8128281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8117348-8117911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8118070-8118165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8119761-8119991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8123835-8123857:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8128206-8128281:1:exon

LOC125484376
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8140899..8154015
location: region:8140899-8154015:1
so has part: feature:8140899-8154015:1:exon
subclass of: SO_0000011

125484376
type: Gene
SIO_000068: ncbigene

position:8140899:1
position: 8140899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8154015:1
position: 8154015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8140899-8154015:1:exon

LOC125484376
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484376
product: uncharacterized LOC125484376
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263198.1
SIO_010081: LOC125484376
subclass of: SO_0000673
so part of: LOC125484376
location: join(8140899..8142171,8147491..8147567,8152253..8154015)
location: region:8140899-8154015:1
so has part: feature:8140899-8142171:1:exon
so has part: feature:8147491-8147567:1:exon
so has part: feature:8152253-8154015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8140899-8142171:1:exon

position:8142171:1
position: 8142171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8147491-8147567:1:exon

position:8147491:1
position: 8147491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8147567:1
position: 8147567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8152253-8154015:1:exon

position:8152253:1
position: 8152253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109921685
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109921685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8159508..8196383
location: region:8159508-8196383:1
so has part: feature:8159508-8196383:1:exon
subclass of: SO_0000010

109921685
type: Gene
SIO_000068: ncbigene

position:8159508:1
position: 8159508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8196383:1
position: 8196383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8159508-8196383:1:exon

LOC109921685
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109921685
product: tripartite motif-containing protein 14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048603019.1
SIO_010081: LOC109921685
subclass of: SO_0000673
so part of: LOC109921685
location: join(8159508..8159585,8178302..8178397,8186027..8186257,8187948..8187970,8189662..8189894,8195176..8196383)
location: region:8159508-8196383:1
so has part: feature:8159508-8159585:1:exon
so has part: feature:8178302-8178397:1:exon
so has part: feature:8186027-8186257:1:exon
so has part: feature:8187948-8187970:1:exon
so has part: feature:8189662-8189894:1:exon
so has part: feature:8195176-8196383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8159508-8159585:1:exon

position:8159585:1
position: 8159585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8178302-8178397:1:exon

position:8178302:1
position: 8178302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8178397:1
position: 8178397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8186027-8186257:1:exon

position:8186027:1
position: 8186027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8186257:1
position: 8186257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8187948-8187970:1:exon

position:8187948:1
position: 8187948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8187970:1
position: 8187970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8189662-8189894:1:exon

position:8189662:1
position: 8189662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8189894:1
position: 8189894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8195176-8196383:1:exon

position:8195176:1
position: 8195176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109921685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109921685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 14-like
translation: MSAVGRTTSASLVGRATSAVGRAALAKEIQSEVEKLQRVRQNCITKQKNFEKSAAEIKTHTSELKGKLSKMFSERRKKLDEDEKCALRLIDEHEHSLLSGIRDSSETFHSMAEQIRLVDEEAQNLMQEDSISFIQKSMELLSKVVETQKLIFPDPPEPALNLSNLPQLKKLMEESEMSYSTTDELGQIHDWMESTCGKGPAEPAIIAHIQSKPSSLLLQTRELSWLTLDPNTASKNLVLSVDLRSVRYSEKEQHYPSNPQRFQTYSQILCSQSFYCGHHSWAVETGGSWWGIGIAYKNIQKTGSNSDLRRTSKAWCLYQGINVLRACHNSKHTLVPLKSFIEKIQVHLNYDAGTLAFYQVTDTLTHLHTFKTIFTQPVYPAFCCENNTWLQLLN
SIO_010081: LOC109921685
subclass of: SO_0000673
so part of: LOC109921685
location: join(8159508..8159585,8178302..8178397,8186027..8186257,8187948..8187970,8189662..8189894,8195176..8195699)
location: region:8159508-8195699:1
so has part: feature:8159508-8159585:1:exon
so has part: feature:8178302-8178397:1:exon
so has part: feature:8186027-8186257:1:exon
so has part: feature:8187948-8187970:1:exon
so has part: feature:8189662-8189894:1:exon
so has part: feature:8195176-8195699:1:exon

XP_048458976.1
type: Protein
SIO_000068: ncbiprotein

position:8195699:1
position: 8195699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8159508-8159585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8178302-8178397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8186027-8186257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8187948-8187970:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8189662-8189894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8195176-8195699:1:exon

chodl
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: chodl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8335677..8363514
location: region:8335677-8363514:1
so has part: feature:8335677-8363514:1:exon
subclass of: SO_0000010

109918157
type: Gene
SIO_000068: ncbigene

position:8335677:1
position: 8335677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8363514:1
position: 8363514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8335677-8363514:1:exon

chodl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: chodl
product: chondrolectin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020518055.2
SIO_010081: chodl
subclass of: SO_0000673
so part of: chodl
location: join(8335677..8335767,8342644..8342962,8352465..8352622,8354264..8354311,8358643..8358738,8359970..8360072,8361855..8363514)
location: region:8335677-8363514:1
so has part: feature:8335677-8335767:1:exon
so has part: feature:8342644-8342962:1:exon
so has part: feature:8352465-8352622:1:exon
so has part: feature:8354264-8354311:1:exon
so has part: feature:8358643-8358738:1:exon
so has part: feature:8359970-8360072:1:exon
so has part: feature:8361855-8363514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8335677-8335767:1:exon

position:8335767:1
position: 8335767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8342644-8342962:1:exon

position:8342644:1
position: 8342644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8342962:1
position: 8342962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8352465-8352622:1:exon

position:8352465:1
position: 8352465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8352622:1
position: 8352622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8354264-8354311:1:exon

position:8354264:1
position: 8354264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8354311:1
position: 8354311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8358643-8358738:1:exon

position:8358643:1
position: 8358643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8358738:1
position: 8358738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8359970-8360072:1:exon

position:8359970:1
position: 8359970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8360072:1
position: 8360072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8361855-8363514:1:exon

position:8361855:1
position: 8361855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

chodl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: chodl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondrolectin
translation: MPRRQELSTRMLVLILSGVLGGGSGTRVLSGQTVCYGGPEYPCYKIAYFQDLSRRIGFEEASQACEMDGGALVSIRSATEQRLIESLLQDLTKSGSGLSDGDFWIGLRRSNEGQSHNAFSGCPDLYRWTDGSAAKFRNWYADEPSCGSEACVVMYHQLTAQPGLGGPYLYQWNDDRCNMKHNFVCKYASENLMTNESEEHVTSDYVSENVSMGPEVKVHVPSNSADDQHHMVVTESSGIMPNVVYVIIPTIPLLLLLVVALATCCIQMLSRSKDRSKSSPNESTLWISTAPKKENLADV
SIO_010081: chodl
subclass of: SO_0000673
so part of: chodl
location: join(8335677..8335767,8342644..8342962,8352465..8352622,8354264..8354311,8358643..8358738,8359970..8360072,8361855..8361939)
location: region:8335677-8361939:1
so has part: feature:8335677-8335767:1:exon
so has part: feature:8342644-8342962:1:exon
so has part: feature:8352465-8352622:1:exon
so has part: feature:8354264-8354311:1:exon
so has part: feature:8358643-8358738:1:exon
so has part: feature:8359970-8360072:1:exon
so has part: feature:8361855-8361939:1:exon

XP_020373644.1
type: Protein
SIO_000068: ncbiprotein

position:8361939:1
position: 8361939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8335677-8335767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8342644-8342962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8352465-8352622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8354264-8354311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8358643-8358738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8359970-8360072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8361855-8361939:1:exon

LOC109913923
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109913923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8604335..8731551)
location: region:8604335-8731551:-1
so has part: feature:8604335-8731551:-1:exon
subclass of: SO_0000010

109913923
type: Gene
SIO_000068: ncbigene

position:8604335:-1
position: 8604335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8731551:-1
position: 8731551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8604335-8731551:-1:exon

LOC109913923
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109913923
product: neural cell adhesion molecule 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020513486.2
SIO_010081: LOC109913923
subclass of: SO_0000673
so part of: LOC109913923
location: complement(join(8604335..8604528,8609015..8609131,8643277..8643481,8703034..8703214,8731464..8731551))
location: region:8604335-8731551:-1
so has part: feature:8731464-8731551:-1:exon
so has part: feature:8703034-8703214:-1:exon
so has part: feature:8643277-8643481:-1:exon
so has part: feature:8609015-8609131:-1:exon
so has part: feature:8604335-8604528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8731464-8731551:-1:exon

position:8731464:-1
position: 8731464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8703034-8703214:-1:exon

position:8703034:-1
position: 8703034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8703214:-1
position: 8703214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8643277-8643481:-1:exon

position:8643277:-1
position: 8643277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8643481:-1
position: 8643481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8609015-8609131:-1:exon

position:8609015:-1
position: 8609015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8609131:-1
position: 8609131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8604335-8604528:-1:exon

position:8604528:-1
position: 8604528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109913923
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109913923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural cell adhesion molecule 2-like
translation: MLKIAQGSKDSIILERLEWDMQYEVQITAVNKLGSSEPTIYEFTMPPKPNTIANTLFRSLGLGAVVGLGVAALLLILVITDVSCFFTKQCGLLMCITTRICGKKNGSSTKTKDAEEGKAAYLKDGSKEPIVEMRTEDEPITNHDGSSANEPNETTPLTEPEKLPLKEGNAKEVLSPEKIEEAVPNDVIQPKEDSSKA
SIO_010081: LOC109913923
subclass of: SO_0000673
so part of: LOC109913923
location: complement(join(8604417..8604528,8609015..8609131,8643277..8643481,8703034..8703193))
location: region:8604417-8703193:-1
so has part: feature:8703034-8703193:-1:exon
so has part: feature:8643277-8643481:-1:exon
so has part: feature:8609015-8609131:-1:exon
so has part: feature:8604417-8604528:-1:exon

XP_020369075.2
type: Protein
SIO_000068: ncbiprotein

position:8604417:-1
position: 8604417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8703193:-1
position: 8703193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8703034-8703193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8643277-8643481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8609015-8609131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8604417-8604528:-1:exon

LOC125484380
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8693811..8699949
location: region:8693811-8699949:1
so has part: feature:8693811-8699949:1:exon
subclass of: SO_0000011

125484380
type: Gene
SIO_000068: ncbigene

position:8693811:1
position: 8693811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8699949:1
position: 8699949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8693811-8699949:1:exon

LOC125484380
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484380
product: uncharacterized LOC125484380
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007263203.1
SIO_010081: LOC125484380
subclass of: SO_0000673
so part of: LOC125484380
location: join(8693811..8693930,8696901..8697095,8699265..8699949)
location: region:8693811-8699949:1
so has part: feature:8693811-8693930:1:exon
so has part: feature:8696901-8697095:1:exon
so has part: feature:8699265-8699949:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8693811-8693930:1:exon

position:8693930:1
position: 8693930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8696901-8697095:1:exon

position:8696901:1
position: 8696901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8697095:1
position: 8697095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8699265-8699949:1:exon

position:8699265:1
position: 8699265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484377
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8746700..8768418
location: region:8746700-8768418:1
so has part: feature:8746700-8768418:1:exon
subclass of: SO_0000011

125484377
type: Gene
SIO_000068: ncbigene

position:8746700:1
position: 8746700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8768418:1
position: 8768418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8746700-8768418:1:exon

LOC125484377
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484377
product: uncharacterized LOC125484377
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263199.1
SIO_010081: LOC125484377
subclass of: SO_0000673
so part of: LOC125484377
location: join(8746700..8746824,8767849..8768418)
location: region:8746700-8768418:1
so has part: feature:8746700-8746824:1:exon
so has part: feature:8767849-8768418:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8746700-8746824:1:exon

position:8746824:1
position: 8746824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8767849-8768418:1:exon

position:8767849:1
position: 8767849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484378
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8780293..8846677
location: region:8780293-8846677:1
so has part: feature:8780293-8846677:1:exon
subclass of: SO_0000011

125484378
type: Gene
SIO_000068: ncbigene

position:8780293:1
position: 8780293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8846677:1
position: 8846677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8780293-8846677:1:exon

LOC125484378
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484378
product: uncharacterized LOC125484378, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_007263200.1
SIO_010081: LOC125484378
subclass of: SO_0000673
so part of: LOC125484378
location: join(8780293..8780344,8783790..8783933,8787652..8787792,8828392..8828625,8846398..8846677)
location: region:8780293-8846677:1
so has part: feature:8780293-8780344:1:exon
so has part: feature:8783790-8783933:1:exon
so has part: feature:8787652-8787792:1:exon
so has part: feature:8828392-8828625:1:exon
so has part: feature:8846398-8846677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8780293-8780344:1:exon

position:8780344:1
position: 8780344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8783790-8783933:1:exon

position:8783790:1
position: 8783790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8783933:1
position: 8783933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8787652-8787792:1:exon

position:8787652:1
position: 8787652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8787792:1
position: 8787792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8828392-8828625:1:exon

position:8828392:1
position: 8828392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8828625:1
position: 8828625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8846398-8846677:1:exon

position:8846398:1
position: 8846398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125484378
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484378
product: uncharacterized LOC125484378, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007263201.1
SIO_010081: LOC125484378
subclass of: SO_0000673
so part of: LOC125484378
location: join(8780293..8780344,8783790..8783933,8787652..8787792,8787943..8788055)
location: region:8780293-8788055:1
so has part: feature:8780293-8780344:1:exon
so has part: feature:8783790-8783933:1:exon
so has part: feature:8787652-8787792:1:exon
so has part: feature:8787943-8788055:1:exon

position:8788055:1
position: 8788055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8780293-8780344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8783790-8783933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8787652-8787792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8787943-8788055:1:exon

position:8787943:1
position: 8787943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ncam2
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: ncam2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8861252..9933423)
location: region:8861252-9933423:-1
so has part: feature:8861252-9933423:-1:exon
subclass of: SO_0000010

109920312
type: Gene
SIO_000068: ncbigene

position:8861252:-1
position: 8861252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9933423:-1
position: 9933423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8861252-9933423:-1:exon

ncam2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: ncam2
product: neural cell adhesion molecule 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048603020.1
SIO_010081: ncam2
subclass of: SO_0000673
so part of: ncam2
location: complement(join(8861252..8861292,8861627..8861800,8892514..8892610,8917556..8917743,8923783..8923933,8931756..8931901,8954656..8954813,8961212..8961329,8987593..8987730,8993822..8993965,8999211..8999417,9042511..9042585,9933271..9933423))
location: region:8861252-9933423:-1
so has part: feature:9933271-9933423:-1:exon
so has part: feature:9042511-9042585:-1:exon
so has part: feature:8999211-8999417:-1:exon
so has part: feature:8993822-8993965:-1:exon
so has part: feature:8987593-8987730:-1:exon
so has part: feature:8961212-8961329:-1:exon
so has part: feature:8954656-8954813:-1:exon
so has part: feature:8931756-8931901:-1:exon
so has part: feature:8923783-8923933:-1:exon
so has part: feature:8917556-8917743:-1:exon
so has part: feature:8892514-8892610:-1:exon
so has part: feature:8861627-8861800:-1:exon
so has part: feature:8861252-8861292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9933271-9933423:-1:exon

position:9933271:-1
position: 9933271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9042511-9042585:-1:exon

position:9042511:-1
position: 9042511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9042585:-1
position: 9042585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8999211-8999417:-1:exon

position:8999211:-1
position: 8999211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8999417:-1
position: 8999417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8993822-8993965:-1:exon

position:8993822:-1
position: 8993822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8993965:-1
position: 8993965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8987593-8987730:-1:exon

position:8987593:-1
position: 8987593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8987730:-1
position: 8987730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8961212-8961329:-1:exon

position:8961212:-1
position: 8961212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8961329:-1
position: 8961329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8954656-8954813:-1:exon

position:8954656:-1
position: 8954656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8954813:-1
position: 8954813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8931756-8931901:-1:exon

position:8931756:-1
position: 8931756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8931901:-1
position: 8931901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8923783-8923933:-1:exon

position:8923783:-1
position: 8923783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8923933:-1
position: 8923933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8917556-8917743:-1:exon

position:8917556:-1
position: 8917556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8917743:-1
position: 8917743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8892514-8892610:-1:exon

position:8892514:-1
position: 8892514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8892610:-1
position: 8892610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8861627-8861800:-1:exon

position:8861627:-1
position: 8861627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8861800:-1
position: 8861800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8861252-8861292:-1:exon

position:8861292:-1
position: 8861292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ncam2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: ncam2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural cell adhesion molecule 2
translation: MTFALFYLIGLLVCGGEAVLQVTISLGKVELSVGESKFFTCTVIGEPVSIEWYRPDGQKIISSERVVVQTEGIRSRLTIYNANEEDAGIYQCQVTDVNGKSQEATILVEIYKKLTFHEIKSPQEFREGEDAVVICEVNSSPAPIVTWLHNNRDISTEPSDKFIMIDNNSLKIRRISKKNEGIYRCEGRVEARGEIDFRDIAVIVNVPPIIHVPKSSAKAIADRQESVTLTCTATGSPEPNITWYRDGILIEDNDKYGLKRSTELTIRNIAREDTGAYICRATNKAGTVEEQLSVKVFVPPHITLLKNGTATENGHVVITCDADGDPTPTIFWSRFDNGSSVLEEEKILGGRFEVRRQKGTSSLHIKNIKPSDSGAYDCEAVSPIGGDKKTMHLDIQYAPKFLSTQVTYYSWEGNSVNISCDVTANPQASIHWKKEGVVLSDINKSDVSIYKKGTKILLEITPAVDSDFGSYNCTASNRIGTRSQEFTLVQAAVPSRPYGLRVLAVSQTIARISFTKPDSHGGVPIHHYQVEVNEADSGDWKTVNSNGSQTFFDVISRMLNDC
SIO_010081: ncam2
subclass of: SO_0000673
so part of: ncam2
location: complement(join(8861252..8861292,8861627..8861800,8892514..8892610,8917556..8917743,8923783..8923933,8931756..8931901,8954656..8954813,8961212..8961329,8987593..8987730,8993822..8993965,8999211..8999417,9042511..9042585,9933271..9933322))
location: region:8861252-9933322:-1
so has part: feature:9933271-9933322:-1:exon
so has part: feature:9042511-9042585:-1:exon
so has part: feature:8999211-8999417:-1:exon
so has part: feature:8993822-8993965:-1:exon
so has part: feature:8987593-8987730:-1:exon
so has part: feature:8961212-8961329:-1:exon
so has part: feature:8954656-8954813:-1:exon
so has part: feature:8931756-8931901:-1:exon
so has part: feature:8923783-8923933:-1:exon
so has part: feature:8917556-8917743:-1:exon
so has part: feature:8892514-8892610:-1:exon
so has part: feature:8861627-8861800:-1:exon
so has part: feature:8861252-8861292:-1:exon

XP_048458977.1
type: Protein
SIO_000068: ncbiprotein

position:9933322:-1
position: 9933322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9933271-9933322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9042511-9042585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8999211-8999417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8993822-8993965:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8987593-8987730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8961212-8961329:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8954656-8954813:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8931756-8931901:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8923783-8923933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8917556-8917743:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8892514-8892610:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8861627-8861800:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8861252-8861292:-1:exon

LOC125484379
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8910593..8916062
location: region:8910593-8916062:1
so has part: feature:8910593-8916062:1:exon
subclass of: SO_0000011

125484379
type: Gene
SIO_000068: ncbigene

position:8910593:1
position: 8910593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8916062:1
position: 8916062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8910593-8916062:1:exon

LOC125484379
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484379
product: uncharacterized LOC125484379
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007263202.1
SIO_010081: LOC125484379
subclass of: SO_0000673
so part of: LOC125484379
location: join(8910593..8911403,8915166..8915311,8915937..8916062)
location: region:8910593-8916062:1
so has part: feature:8910593-8911403:1:exon
so has part: feature:8915166-8915311:1:exon
so has part: feature:8915937-8916062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8910593-8911403:1:exon

position:8911403:1
position: 8911403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8915166-8915311:1:exon

position:8915166:1
position: 8915166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8915311:1
position: 8915311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8915937-8916062:1:exon

position:8915937:1
position: 8915937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mrpl39
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: mrpl39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11437295..11465264)
location: region:11437295-11465264:-1
so has part: feature:11437295-11465264:-1:exon
subclass of: SO_0000010

109933812
type: Gene
SIO_000068: ncbigene

position:11437295:-1
position: 11437295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11465264:-1
position: 11465264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11437295-11465264:-1:exon

mrpl39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: mrpl39
product: mitochondrial ribosomal protein L39
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020532746.2
SIO_010081: mrpl39
subclass of: SO_0000673
so part of: mrpl39
location: complement(join(11437295..11438265,11438405..11438452,11440777..11440930,11442525..11442590,11443243..11443355,11448649..11448716,11449660..11449759,11452624..11452763,11457429..11457635,11464130..11465264))
location: region:11437295-11465264:-1
so has part: feature:11464130-11465264:-1:exon
so has part: feature:11457429-11457635:-1:exon
so has part: feature:11452624-11452763:-1:exon
so has part: feature:11449660-11449759:-1:exon
so has part: feature:11448649-11448716:-1:exon
so has part: feature:11443243-11443355:-1:exon
so has part: feature:11442525-11442590:-1:exon
so has part: feature:11440777-11440930:-1:exon
so has part: feature:11438405-11438452:-1:exon
so has part: feature:11437295-11438265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11464130-11465264:-1:exon

position:11464130:-1
position: 11464130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11457429-11457635:-1:exon

position:11457429:-1
position: 11457429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11457635:-1
position: 11457635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11452624-11452763:-1:exon

position:11452624:-1
position: 11452624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11452763:-1
position: 11452763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11449660-11449759:-1:exon

position:11449660:-1
position: 11449660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11449759:-1
position: 11449759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11448649-11448716:-1:exon

position:11448649:-1
position: 11448649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11448716:-1
position: 11448716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11443243-11443355:-1:exon

position:11443243:-1
position: 11443243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11443355:-1
position: 11443355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11442525-11442590:-1:exon

position:11442525:-1
position: 11442525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11442590:-1
position: 11442590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11440777-11440930:-1:exon

position:11440777:-1
position: 11440777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11440930:-1
position: 11440930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11438405-11438452:-1:exon

position:11438405:-1
position: 11438405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11438452:-1
position: 11438452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11437295-11438265:-1:exon

position:11438265:-1
position: 11438265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mrpl39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: mrpl39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L39, mitochondrial
translation: MSVGGGILTGGVQGVVIPSGNGRRRLDLALSVLCTSIRSIIDHLVDFTGSRIIAVALAAFIAMPARCVRRVLAPCVRFLSTAADSCLASTELLQKRSQLFDKEKDRQRALIPRIEKIEVKHVGTPDPGTVFIMNKGLSTPYNCAMHMSEWCVKRSMLALVDGEVWDMYKPLNKSCDIQFLTFKDENPEEVNKAYWRSCAMIMGYVLQTAFKEEYNVELIRAPEIPVISGAFCYDVILDGRLNDWTPSVENLRSLSKDAHMLIHKDLPFESLEVAPKVAVEIFQENKHKLAAIEEQASLNPNKLVKLYRIGDFVDVSNGPHVSRTSVCSQYEITAAHNLKTTESGLVRRFQGISLPIHLKVLFSVWERLRQRSQKLITKDQGHTQTVEARAS
SIO_010081: mrpl39
subclass of: SO_0000673
so part of: mrpl39
location: complement(join(11438215..11438265,11438405..11438452,11440777..11440930,11442525..11442590,11443243..11443355,11448649..11448716,11449660..11449759,11452624..11452763,11457429..11457635,11464130..11464358))
location: region:11438215-11464358:-1
so has part: feature:11464130-11464358:-1:exon
so has part: feature:11457429-11457635:-1:exon
so has part: feature:11452624-11452763:-1:exon
so has part: feature:11449660-11449759:-1:exon
so has part: feature:11448649-11448716:-1:exon
so has part: feature:11443243-11443355:-1:exon
so has part: feature:11442525-11442590:-1:exon
so has part: feature:11440777-11440930:-1:exon
so has part: feature:11438405-11438452:-1:exon
so has part: feature:11438215-11438265:-1:exon

XP_020388335.2
type: Protein
SIO_000068: ncbiprotein

position:11438215:-1
position: 11438215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11464358:-1
position: 11464358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11464130-11464358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11457429-11457635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11452624-11452763:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11449660-11449759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11448649-11448716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11443243-11443355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11442525-11442590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11440777-11440930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11438405-11438452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11438215-11438265:-1:exon

jam2a
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: jam2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11480873..11575077
location: region:11480873-11575077:1
so has part: feature:11480873-11575077:1:exon
subclass of: SO_0000010

109933809
type: Gene
SIO_000068: ncbigene

position:11480873:1
position: 11480873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11575077:1
position: 11575077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11480873-11575077:1:exon

jam2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: jam2a
product: junctional adhesion molecule 2a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603021.1
SIO_010081: jam2a
subclass of: SO_0000673
so part of: jam2a
location: join(11480873..11480969,11542589..11542702,11544803..11544952,11553459..11553735,11561128..11561309,11562113..11562128,11566430..11566472,11570553..11575077)
location: region:11480873-11575077:1
so has part: feature:11480873-11480969:1:exon
so has part: feature:11542589-11542702:1:exon
so has part: feature:11544803-11544952:1:exon
so has part: feature:11553459-11553735:1:exon
so has part: feature:11561128-11561309:1:exon
so has part: feature:11562113-11562128:1:exon
so has part: feature:11566430-11566472:1:exon
so has part: feature:11570553-11575077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11480873-11480969:1:exon

position:11480969:1
position: 11480969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11542589-11542702:1:exon

position:11542589:1
position: 11542589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11542702:1
position: 11542702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11544803-11544952:1:exon

position:11544803:1
position: 11544803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11544952:1
position: 11544952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11553459-11553735:1:exon

position:11553459:1
position: 11553459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11553735:1
position: 11553735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11561128-11561309:1:exon

position:11561128:1
position: 11561128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11561309:1
position: 11561309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11562113-11562128:1:exon

position:11562113:1
position: 11562113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11562128:1
position: 11562128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11566430-11566472:1:exon

position:11566430:1
position: 11566430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11566472:1
position: 11566472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11570553-11575077:1:exon

position:11570553:1
position: 11570553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

jam2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: jam2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctional adhesion molecule 2A
translation: MAADDSFNEETGRVESEDRGVPVTVVQRMGSKAALLPCVFNVETTPSPRVEWKKIKGKHVTFMYFDHGLTDAYKNRAKMNGYSIRLLRVTREDMATYRCEVTARDDRIVFAEKEFKLSVLVPPVVPTCKVPSSAISGSKVMLTCKESEGSPPSNYTWYKDGTILLERPAKSSTSNNSYTVDGKTGILVNKGFWRIKSDSRDPVVVNGEDLNGCSSFHFCTLFVDEIVCFSLILHLLADDLDIGAIVITVIIIALVLSLCGLGMYYTHRKGYLGRSGSSKAKTTKQTAASPVNEEFKHTKSFVI
SIO_010081: jam2a
subclass of: SO_0000673
so part of: jam2a
location: join(11480873..11480969,11542589..11542702,11544803..11544952,11553459..11553735,11561128..11561309,11562113..11562128,11566430..11566472,11570553..11570585)
location: region:11480873-11570585:1
so has part: feature:11480873-11480969:1:exon
so has part: feature:11542589-11542702:1:exon
so has part: feature:11544803-11544952:1:exon
so has part: feature:11553459-11553735:1:exon
so has part: feature:11561128-11561309:1:exon
so has part: feature:11562113-11562128:1:exon
so has part: feature:11566430-11566472:1:exon
so has part: feature:11570553-11570585:1:exon

XP_048458978.1
type: Protein
SIO_000068: ncbiprotein

position:11570585:1
position: 11570585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11480873-11480969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11542589-11542702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11544803-11544952:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11553459-11553735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11561128-11561309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11562113-11562128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11566430-11566472:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11570553-11570585:1:exon

atp5pf
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: atp5pf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11579013..11583294)
location: region:11579013-11583294:-1
so has part: feature:11579013-11583294:-1:exon
subclass of: SO_0000010

109933810
type: Gene
SIO_000068: ncbigene

position:11579013:-1
position: 11579013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11583294:-1
position: 11583294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11579013-11583294:-1:exon

atp5pf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: atp5pf
product: ATP synthase peripheral stalk subunit F6, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020532744.2
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579013..11579132,11579455..11579579,11581371..11581571,11583168..11583294))
location: region:11579013-11583294:-1
so has part: feature:11583168-11583294:-1:exon
so has part: feature:11581371-11581571:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579013-11579132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11583168-11583294:-1:exon

position:11583168:-1
position: 11583168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11581371-11581571:-1:exon

position:11581371:-1
position: 11581371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11581571:-1
position: 11581571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11579455-11579579:-1:exon

position:11579455:-1
position: 11579455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11579579:-1
position: 11579579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11579013-11579132:-1:exon

position:11579132:-1
position: 11579132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

atp5pf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: atp5pf
product: ATP synthase peripheral stalk subunit F6, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020532745.2
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579013..11579132,11579455..11579579,11581371..11581571,11583050..11583152))
location: region:11579013-11583152:-1
so has part: feature:11583050-11583152:-1:exon
so has part: feature:11581371-11581571:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579013-11579132:-1:exon

position:11583152:-1
position: 11583152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11583050-11583152:-1:exon

position:11583050:-1
position: 11583050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11581371-11581571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579455-11579579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11579013-11579132:-1:exon

atp5pf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: atp5pf
product: ATP synthase peripheral stalk subunit F6, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603220.1
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579013..11579132,11579455..11579579,11581371..11581571,11582987..11583075))
location: region:11579013-11583075:-1
so has part: feature:11582987-11583075:-1:exon
so has part: feature:11581371-11581571:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579013-11579132:-1:exon

position:11583075:-1
position: 11583075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11582987-11583075:-1:exon

position:11582987:-1
position: 11582987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11581371-11581571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579455-11579579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11579013-11579132:-1:exon

atp5pf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: atp5pf
product: ATP synthase peripheral stalk subunit F6, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603221.1
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579013..11579132,11579455..11579579,11581371..11581571,11583007..11583061))
location: region:11579013-11583061:-1
so has part: feature:11583007-11583061:-1:exon
so has part: feature:11581371-11581571:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579013-11579132:-1:exon

position:11583061:-1
position: 11583061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11583007-11583061:-1:exon

position:11583007:-1
position: 11583007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11581371-11581571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579455-11579579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11579013-11579132:-1:exon

atp5pf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: atp5pf
product: ATP synthase peripheral stalk subunit F6, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048603219.1
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579013..11579132,11579455..11579579,11581371..11581571,11581709..11581838))
location: region:11579013-11581838:-1
so has part: feature:11581709-11581838:-1:exon
so has part: feature:11581371-11581571:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579013-11579132:-1:exon

position:11581838:-1
position: 11581838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11581709-11581838:-1:exon

position:11581709:-1
position: 11581709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11581371-11581571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579455-11579579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11579013-11579132:-1:exon

atp5pf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: atp5pf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform X1
translation: MAEQTPTAEWPTLAVTFTAEMSSLSKLVCLDLHYQTAMILQRLLCFSTLLRSSLSVAIRRNIGFTAVVFNKTQNLDPIQKLFIDKIRDYDAKSKKAGGPVDAGPEYQKNMEDEIAKLQRLYGGGDLTKFPDFKFEEPKFDEVGK
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579104..11579132,11579455..11579579,11581371..11581571,11581709..11581788))
location: region:11579104-11581788:-1
so has part: feature:11581709-11581788:-1:exon
so has part: feature:11581371-11581571:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579104-11579132:-1:exon

XP_048459176.1
type: Protein
SIO_000068: ncbiprotein

position:11579104:-1
position: 11579104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11581788:-1
position: 11581788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11581709-11581788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11581371-11581571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579455-11579579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11579104-11579132:-1:exon

atp5pf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: atp5pf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform X2
translation: MILQRLLCFSTLLRSSLSVAIRRNIGFTAVVFNKTQNLDPIQKLFIDKIRDYDAKSKKAGGPVDAGPEYQKNMEDEIAKLQRLYGGGDLTKFPDFKFEEPKFDEVGK
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579104..11579132,11579455..11579579,11581371..11581540))
location: region:11579104-11581540:-1
so has part: feature:11581371-11581540:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579104-11579132:-1:exon

XP_020388333.1
type: Protein
SIO_000068: ncbiprotein

position:11581540:-1
position: 11581540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11581371-11581540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11579455-11579579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579104-11579132:-1:exon

atp5pf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: atp5pf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform X2
translation: MILQRLLCFSTLLRSSLSVAIRRNIGFTAVVFNKTQNLDPIQKLFIDKIRDYDAKSKKAGGPVDAGPEYQKNMEDEIAKLQRLYGGGDLTKFPDFKFEEPKFDEVGK
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579104..11579132,11579455..11579579,11581371..11581540))
location: region:11579104-11581540:-1
so has part: feature:11581371-11581540:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579104-11579132:-1:exon

XP_020388334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11581371-11581540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11579455-11579579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579104-11579132:-1:exon

atp5pf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: atp5pf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform X2
translation: MILQRLLCFSTLLRSSLSVAIRRNIGFTAVVFNKTQNLDPIQKLFIDKIRDYDAKSKKAGGPVDAGPEYQKNMEDEIAKLQRLYGGGDLTKFPDFKFEEPKFDEVGK
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579104..11579132,11579455..11579579,11581371..11581540))
location: region:11579104-11581540:-1
so has part: feature:11581371-11581540:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579104-11579132:-1:exon

XP_048459177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11581371-11581540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11579455-11579579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579104-11579132:-1:exon

atp5pf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: atp5pf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform X2
translation: MILQRLLCFSTLLRSSLSVAIRRNIGFTAVVFNKTQNLDPIQKLFIDKIRDYDAKSKKAGGPVDAGPEYQKNMEDEIAKLQRLYGGGDLTKFPDFKFEEPKFDEVGK
SIO_010081: atp5pf
subclass of: SO_0000673
so part of: atp5pf
location: complement(join(11579104..11579132,11579455..11579579,11581371..11581540))
location: region:11579104-11581540:-1
so has part: feature:11581371-11581540:-1:exon
so has part: feature:11579455-11579579:-1:exon
so has part: feature:11579104-11579132:-1:exon

XP_048459178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11581371-11581540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11579455-11579579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579104-11579132:-1:exon

gabpa
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: gabpa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11583416..11625000
location: region:11583416-11625000:1
so has part: feature:11583416-11625000:1:exon
subclass of: SO_0000010

109933808
type: Gene
SIO_000068: ncbigene

position:11583416:1
position: 11583416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11625000:1
position: 11625000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11583416-11625000:1:exon

gabpa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gabpa
product: GA binding protein transcription factor subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_020532741.2
SIO_010081: gabpa
subclass of: SO_0000673
so part of: gabpa
location: join(11583416..11583583,11595583..11595648,11602222..11602317,11606815..11606962,11608512..11608596,11613077..11613328,11617979..11618173,11620263..11620319,11624825..11625000)
location: region:11583416-11625000:1
so has part: feature:11583416-11583583:1:exon
so has part: feature:11595583-11595648:1:exon
so has part: feature:11602222-11602317:1:exon
so has part: feature:11606815-11606962:1:exon
so has part: feature:11608512-11608596:1:exon
so has part: feature:11613077-11613328:1:exon
so has part: feature:11617979-11618173:1:exon
so has part: feature:11620263-11620319:1:exon
so has part: feature:11624825-11625000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11583416-11583583:1:exon

position:11583583:1
position: 11583583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11595583-11595648:1:exon

position:11595583:1
position: 11595583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11595648:1
position: 11595648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11602222-11602317:1:exon

position:11602222:1
position: 11602222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11602317:1
position: 11602317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11606815-11606962:1:exon

position:11606815:1
position: 11606815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11606962:1
position: 11606962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11608512-11608596:1:exon

position:11608512:1
position: 11608512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11608596:1
position: 11608596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11613077-11613328:1:exon

position:11613077:1
position: 11613077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11613328:1
position: 11613328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11617979-11618173:1:exon

position:11617979:1
position: 11617979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11618173:1
position: 11618173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11620263-11620319:1:exon

position:11620263:1
position: 11620263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11620319:1
position: 11620319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11624825-11625000:1:exon

position:11624825:1
position: 11624825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gabpa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gabpa
product: GA binding protein transcription factor subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_048603216.1
SIO_010081: gabpa
subclass of: SO_0000673
so part of: gabpa
location: join(11583416..11583583,11602222..11602317,11606815..11606962,11608512..11608596,11613077..11613328,11617979..11618173,11620263..11620319,11624825..11625000)
location: region:11583416-11625000:1
so has part: feature:11583416-11583583:1:exon
so has part: feature:11602222-11602317:1:exon
so has part: feature:11606815-11606962:1:exon
so has part: feature:11608512-11608596:1:exon
so has part: feature:11613077-11613328:1:exon
so has part: feature:11617979-11618173:1:exon
so has part: feature:11620263-11620319:1:exon
so has part: feature:11624825-11625000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11583416-11583583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11602222-11602317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11606815-11606962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11608512-11608596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11613077-11613328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11617979-11618173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11620263-11620319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11624825-11625000:1:exon

gabpa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gabpa
product: GA binding protein transcription factor subunit alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_048603217.1
SIO_010081: gabpa
subclass of: SO_0000673
so part of: gabpa
location: join(11583417..11583583,11595583..11595648,11602222..11602317,11606815..11606962,11608512..11608596,11613080..11613328,11617979..11618173,11620263..11620319,11624825..11625000)
location: region:11583417-11625000:1
so has part: feature:11583417-11583583:1:exon
so has part: feature:11595583-11595648:1:exon
so has part: feature:11602222-11602317:1:exon
so has part: feature:11606815-11606962:1:exon
so has part: feature:11608512-11608596:1:exon
so has part: feature:11613080-11613328:1:exon
so has part: feature:11617979-11618173:1:exon
so has part: feature:11620263-11620319:1:exon
so has part: feature:11624825-11625000:1:exon

position:11583417:1
position: 11583417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11583417-11583583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11595583-11595648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11602222-11602317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11606815-11606962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11608512-11608596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11613080-11613328:1:exon

position:11613080:1
position: 11613080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11617979-11618173:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11620263-11620319:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11624825-11625000:1:exon

gabpa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: gabpa
product: GA binding protein transcription factor subunit alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048603218.1
SIO_010081: gabpa
subclass of: SO_0000673
so part of: gabpa
location: join(11583417..11583583,11602222..11602317,11606815..11606962,11608512..11608596,11613080..11613328,11617979..11618173,11620263..11620319,11624825..11625000)
location: region:11583417-11625000:1
so has part: feature:11583417-11583583:1:exon
so has part: feature:11602222-11602317:1:exon
so has part: feature:11606815-11606962:1:exon
so has part: feature:11608512-11608596:1:exon
so has part: feature:11613080-11613328:1:exon
so has part: feature:11617979-11618173:1:exon
so has part: feature:11620263-11620319:1:exon
so has part: feature:11624825-11625000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11583417-11583583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11602222-11602317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11606815-11606962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11608512-11608596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11613080-11613328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11617979-11618173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11620263-11620319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11624825-11625000:1:exon

gabpa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gabpa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain isoform X1
translation: MTKRSAEIEIEIDGEEKRHCTEESIAEQTTITTAEFVSQSIDINEPIGNLKKLLEPRLQCSLEAHEICLQDILLDPNRSLFDQGVKTDGTVQLSVEVISRQAGVEPKLNILEIVKPVETVEVVIDPDAAHHAGAEAQLVEEAQVITLDGSKQLTAIPDETSEQVTRWAAALEGYRKEQEHLGIPYDPIQWSADQVLHWAVWVMKEFTMIEVDIKDLNVLGKDLCALSQEEFLQRVPKGEILWSHLELLRKYVLASQEQTGEIATVTIDQPVQIIPATVQSTTPTTIKVFTGTPKSAKVPRAPRISGEDRSSPGNRTGKELLV
SIO_010081: gabpa
subclass of: SO_0000673
so part of: gabpa
location: join(11602247..11602317,11606815..11606962,11608512..11608596,11613077..11613328,11617979..11618173,11620263..11620319,11624825..11624985)
location: region:11602247-11624985:1
so has part: feature:11602247-11602317:1:exon
so has part: feature:11606815-11606962:1:exon
so has part: feature:11608512-11608596:1:exon
so has part: feature:11613077-11613328:1:exon
so has part: feature:11617979-11618173:1:exon
so has part: feature:11620263-11620319:1:exon
so has part: feature:11624825-11624985:1:exon

XP_020388330.2
type: Protein
SIO_000068: ncbiprotein

position:11602247:1
position: 11602247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11624985:1
position: 11624985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11602247-11602317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11606815-11606962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11608512-11608596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11613077-11613328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617979-11618173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11620263-11620319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11624825-11624985:1:exon

gabpa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gabpa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain isoform X1
translation: MTKRSAEIEIEIDGEEKRHCTEESIAEQTTITTAEFVSQSIDINEPIGNLKKLLEPRLQCSLEAHEICLQDILLDPNRSLFDQGVKTDGTVQLSVEVISRQAGVEPKLNILEIVKPVETVEVVIDPDAAHHAGAEAQLVEEAQVITLDGSKQLTAIPDETSEQVTRWAAALEGYRKEQEHLGIPYDPIQWSADQVLHWAVWVMKEFTMIEVDIKDLNVLGKDLCALSQEEFLQRVPKGEILWSHLELLRKYVLASQEQTGEIATVTIDQPVQIIPATVQSTTPTTIKVFTGTPKSAKVPRAPRISGEDRSSPGNRTGKELLV
SIO_010081: gabpa
subclass of: SO_0000673
so part of: gabpa
location: join(11602247..11602317,11606815..11606962,11608512..11608596,11613077..11613328,11617979..11618173,11620263..11620319,11624825..11624985)
location: region:11602247-11624985:1
so has part: feature:11602247-11602317:1:exon
so has part: feature:11606815-11606962:1:exon
so has part: feature:11608512-11608596:1:exon
so has part: feature:11613077-11613328:1:exon
so has part: feature:11617979-11618173:1:exon
so has part: feature:11620263-11620319:1:exon
so has part: feature:11624825-11624985:1:exon

XP_048459173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11602247-11602317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11606815-11606962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11608512-11608596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11613077-11613328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617979-11618173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11620263-11620319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11624825-11624985:1:exon

gabpa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gabpa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain isoform X2
translation: MTKRSAEIEIEIDGEEKRHCTEESIAEQTTITTAEFVSQSIDINEPIGNLKKLLEPRLQCSLEAHEICLQDILLDPNRSLFDQGVKTDGTVQLSVEVISRQGVEPKLNILEIVKPVETVEVVIDPDAAHHAGAEAQLVEEAQVITLDGSKQLTAIPDETSEQVTRWAAALEGYRKEQEHLGIPYDPIQWSADQVLHWAVWVMKEFTMIEVDIKDLNVLGKDLCALSQEEFLQRVPKGEILWSHLELLRKYVLASQEQTGEIATVTIDQPVQIIPATVQSTTPTTIKVFTGTPKSAKVPRAPRISGEDRSSPGNRTGKELLV
SIO_010081: gabpa
subclass of: SO_0000673
so part of: gabpa
location: join(11602247..11602317,11606815..11606962,11608512..11608596,11613080..11613328,11617979..11618173,11620263..11620319,11624825..11624985)
location: region:11602247-11624985:1
so has part: feature:11602247-11602317:1:exon
so has part: feature:11606815-11606962:1:exon
so has part: feature:11608512-11608596:1:exon
so has part: feature:11613080-11613328:1:exon
so has part: feature:11617979-11618173:1:exon
so has part: feature:11620263-11620319:1:exon
so has part: feature:11624825-11624985:1:exon

XP_048459174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11602247-11602317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11606815-11606962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11608512-11608596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11613080-11613328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617979-11618173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11620263-11620319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11624825-11624985:1:exon

gabpa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: gabpa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain isoform X2
translation: MTKRSAEIEIEIDGEEKRHCTEESIAEQTTITTAEFVSQSIDINEPIGNLKKLLEPRLQCSLEAHEICLQDILLDPNRSLFDQGVKTDGTVQLSVEVISRQGVEPKLNILEIVKPVETVEVVIDPDAAHHAGAEAQLVEEAQVITLDGSKQLTAIPDETSEQVTRWAAALEGYRKEQEHLGIPYDPIQWSADQVLHWAVWVMKEFTMIEVDIKDLNVLGKDLCALSQEEFLQRVPKGEILWSHLELLRKYVLASQEQTGEIATVTIDQPVQIIPATVQSTTPTTIKVFTGTPKSAKVPRAPRISGEDRSSPGNRTGKELLV
SIO_010081: gabpa
subclass of: SO_0000673
so part of: gabpa
location: join(11602247..11602317,11606815..11606962,11608512..11608596,11613080..11613328,11617979..11618173,11620263..11620319,11624825..11624985)
location: region:11602247-11624985:1
so has part: feature:11602247-11602317:1:exon
so has part: feature:11606815-11606962:1:exon
so has part: feature:11608512-11608596:1:exon
so has part: feature:11613080-11613328:1:exon
so has part: feature:11617979-11618173:1:exon
so has part: feature:11620263-11620319:1:exon
so has part: feature:11624825-11624985:1:exon

XP_048459175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11602247-11602317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11606815-11606962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11608512-11608596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11613080-11613328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617979-11618173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11620263-11620319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11624825-11624985:1:exon

LOC109925426
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC109925426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11634703..11644132)
location: region:11634703-11644132:-1
so has part: feature:11634703-11644132:-1:exon
subclass of: SO_0000010

109925426
type: Gene
SIO_000068: ncbigene

position:11634703:-1
position: 11634703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11644132:-1
position: 11644132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11634703-11644132:-1:exon

LOC109925426
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: LOC109925426
product: GA-binding protein alpha chain-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_020525370.2
SIO_010081: LOC109925426
subclass of: SO_0000673
so part of: LOC109925426
location: complement(join(11634703..11635300,11640576..11640768,11643704..11644132))
location: region:11634703-11644132:-1
so has part: feature:11643704-11644132:-1:exon
so has part: feature:11640576-11640768:-1:exon
so has part: feature:11634703-11635300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11643704-11644132:-1:exon

position:11643704:-1
position: 11643704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11640576-11640768:-1:exon

position:11640576:-1
position: 11640576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11640768:-1
position: 11640768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11634703-11635300:-1:exon

position:11635300:-1
position: 11635300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109925426
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: LOC109925426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain-like
translation: MTNLQQPQPSSYVSGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQIHGMTGQPVTTVTLAAASLQSEKDS
SIO_010081: LOC109925426
subclass of: SO_0000673
so part of: LOC109925426
location: complement(join(11635069..11635300,11640576..11640768,11643704..11643746))
location: region:11635069-11643746:-1
so has part: feature:11643704-11643746:-1:exon
so has part: feature:11640576-11640768:-1:exon
so has part: feature:11635069-11635300:-1:exon

XP_020380959.2
type: Protein
SIO_000068: ncbiprotein

position:11635069:-1
position: 11635069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11643746:-1
position: 11643746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11643704-11643746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11640576-11640768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11635069-11635300:-1:exon

appa
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: appa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11728567..11818587)
location: region:11728567-11818587:-1
so has part: feature:11728567-11818587:-1:exon
subclass of: SO_0000010

109935395
type: Gene
SIO_000068: ncbigene

position:11728567:-1
position: 11728567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11818587:-1
position: 11818587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11728567-11818587:-1:exon

appa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: appa
product: amyloid beta (A4) precursor protein a, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602950.1
SIO_010081: appa
subclass of: SO_0000673
so part of: appa
location: complement(join(11728567..11729681,11733658..11733804,11738311..11738411,11745326..11745547,11749630..11749729,11751074..11751202,11752172..11752330,11752653..11752727,11753009..11753142,11772367..11772534,11783107..11783273,11793234..11793427,11796848..11796960,11818015..11818144,11818580..11818587))
location: region:11728567-11818587:-1
so has part: feature:11818580-11818587:-1:exon
so has part: feature:11818015-11818144:-1:exon
so has part: feature:11796848-11796960:-1:exon
so has part: feature:11793234-11793427:-1:exon
so has part: feature:11783107-11783273:-1:exon
so has part: feature:11772367-11772534:-1:exon
so has part: feature:11753009-11753142:-1:exon
so has part: feature:11752653-11752727:-1:exon
so has part: feature:11752172-11752330:-1:exon
so has part: feature:11751074-11751202:-1:exon
so has part: feature:11749630-11749729:-1:exon
so has part: feature:11745326-11745547:-1:exon
so has part: feature:11738311-11738411:-1:exon
so has part: feature:11733658-11733804:-1:exon
so has part: feature:11728567-11729681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11818580-11818587:-1:exon

position:11818580:-1
position: 11818580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11818015-11818144:-1:exon

position:11818015:-1
position: 11818015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11818144:-1
position: 11818144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11796848-11796960:-1:exon

position:11796848:-1
position: 11796848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11796960:-1
position: 11796960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11793234-11793427:-1:exon

position:11793234:-1
position: 11793234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11793427:-1
position: 11793427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11783107-11783273:-1:exon

position:11783107:-1
position: 11783107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11783273:-1
position: 11783273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11772367-11772534:-1:exon

position:11772367:-1
position: 11772367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11772534:-1
position: 11772534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11753009-11753142:-1:exon

position:11753009:-1
position: 11753009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11753142:-1
position: 11753142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11752653-11752727:-1:exon

position:11752653:-1
position: 11752653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11752727:-1
position: 11752727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11752172-11752330:-1:exon

position:11752172:-1
position: 11752172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11752330:-1
position: 11752330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11751074-11751202:-1:exon

position:11751074:-1
position: 11751074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11751202:-1
position: 11751202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11749630-11749729:-1:exon

position:11749630:-1
position: 11749630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11749729:-1
position: 11749729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11745326-11745547:-1:exon

position:11745326:-1
position: 11745326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11745547:-1
position: 11745547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11738311-11738411:-1:exon

position:11738311:-1
position: 11738311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11738411:-1
position: 11738411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11733658-11733804:-1:exon

position:11733658:-1
position: 11733658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11733804:-1
position: 11733804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11728567-11729681:-1:exon

position:11729681:-1
position: 11729681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

appa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 259920
gene: appa
product: amyloid beta (A4) precursor protein a, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048602949.1
SIO_010081: appa
subclass of: SO_0000673
so part of: appa
location: complement(join(11728567..11729681,11733658..11733804,11738311..11738411,11739193..11739246,11745326..11745547,11749630..11749729,11751074..11751202,11752172..11752330,11752653..11752727,11753009..11753142,11772367..11772534,11783107..11783273,11793234..11793427,11796848..11796960,11818015..11818144,11818580..11818587))
location: region:11728567-11818587:-1
so has part: feature:11818580-11818587:-1:exon
so has part: feature:11818015-11818144:-1:exon
so has part: feature:11796848-11796960:-1:exon
so has part: feature:11793234-11793427:-1:exon
so has part: feature:11783107-11783273:-1:exon
so has part: feature:11772367-11772534:-1:exon
so has part: feature:11753009-11753142:-1:exon
so has part: feature:11752653-11752727:-1:exon
so has part: feature:11752172-11752330:-1:exon
so has part: feature:11751074-11751202:-1:exon
so has part: feature:11749630-11749729:-1:exon
so has part: feature:11745326-11745547:-1:exon
so has part: feature:11739193-11739246:-1:exon
so has part: feature:11738311-11738411:-1:exon
so has part: feature:11733658-11733804:-1:exon
so has part: feature:11728567-11729681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11818580-11818587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11818015-11818144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11796848-11796960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11793234-11793427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11783107-11783273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11772367-11772534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11753009-11753142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11752653-11752727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11752172-11752330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11751074-11751202:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11749630-11749729:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11745326-11745547:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11739193-11739246:-1:exon

position:11739193:-1
position: 11739193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11739246:-1
position: 11739246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11738311-11738411:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11733658-11733804:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11728567-11729681:-1:exon

appa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: appa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid beta (A4) precursor protein a isoform X2
translation: MEVYPDLQITNVVEANQPVTIQNWCKKGRKQCKGHPHIVVPYRCLVGEFVSDALLVPDKCKFLHREKMDTCESHLYWHTVAKETCGDKIMNLHDFGMLLPCGIDEFRGVEFVCCPIPEENDKIDDSDMDEEDSDVWWGGDDDDYADGSDKIVEEQPIEDESEIDDEDDDELDGEEADDQYEDPTEHTTSSTTTTTEAIEEVVREVCSEQAETGPCQAMLPRWYFDISEGKCAQFIYGGCGGNRNNFASEEYCLAVCNSVIPTTAASTPDAVDKYLETPGDENEHAYFQKAKERLEAKHRERMSKIMREWEEAERQAKNLPKADKKAVIQRFQEMVESLEQEAASERQQLVETHMARVEAMLNDRRRIALENYLAALQADPPRPRHVLNALKKYIRAEQKDRQHTLKHFEHVRMVDPKKAAQIKSQVMTHLRVIDERMNQSLSLLYKVPSVAEEIQDEVDELLQKEQSYIDDLVANSVSDTRISYGNDALVPSLSETKTTIELLPDDGEFNLDDFQPLHPFEVDSIPANTENEGSGLTGIKTEEIAEVKMETEFRQDSGYEVHHQKLVFFPEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
SIO_010081: appa
subclass of: SO_0000673
so part of: appa
location: complement(join(11729580..11729681,11733658..11733804,11738311..11738411,11745326..11745547,11749630..11749729,11751074..11751202,11752172..11752330,11752653..11752727,11753009..11753142,11772367..11772534,11783107..11783273,11793234..11793427,11796848..11796960,11818015..11818144,11818580..11818585))
location: region:11729580-11818585:-1
so has part: feature:11818580-11818585:-1:exon
so has part: feature:11818015-11818144:-1:exon
so has part: feature:11796848-11796960:-1:exon
so has part: feature:11793234-11793427:-1:exon
so has part: feature:11783107-11783273:-1:exon
so has part: feature:11772367-11772534:-1:exon
so has part: feature:11753009-11753142:-1:exon
so has part: feature:11752653-11752727:-1:exon
so has part: feature:11752172-11752330:-1:exon
so has part: feature:11751074-11751202:-1:exon
so has part: feature:11749630-11749729:-1:exon
so has part: feature:11745326-11745547:-1:exon
so has part: feature:11738311-11738411:-1:exon
so has part: feature:11733658-11733804:-1:exon
so has part: feature:11729580-11729681:-1:exon

XP_048458907.1
type: Protein
SIO_000068: ncbiprotein

position:11729580:-1
position: 11729580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11818585:-1
position: 11818585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11818580-11818585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11818015-11818144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11796848-11796960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11793234-11793427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11783107-11783273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11772367-11772534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11753009-11753142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11752653-11752727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11752172-11752330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11751074-11751202:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11749630-11749729:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11745326-11745547:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11738311-11738411:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11733658-11733804:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11729580-11729681:-1:exon

appa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 259920
gene: appa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid beta (A4) precursor protein a isoform X1
translation: MEVYPDLQITNVVEANQPVTIQNWCKKGRKQCKGHPHIVVPYRCLVGEFVSDALLVPDKCKFLHREKMDTCESHLYWHTVAKETCGDKIMNLHDFGMLLPCGIDEFRGVEFVCCPIPEENDKIDDSDMDEEDSDVWWGGDDDDYADGSDKIVEEQPIEDESEIDDEDDDELDGEEADDQYEDPTEHTTSSTTTTTEAIEEVVREVCSEQAETGPCQAMLPRWYFDISEGKCAQFIYGGCGGNRNNFASEEYCLAVCNSVIPTTAASTPDAVDKYLETPGDENEHAYFQKAKERLEAKHRERMSKIMREWEEAERQAKNLPKADKKAVIQRFQEMVESLEQEAASERQQLVETHMARVEAMLNDRRRIALENYLAALQADPPRPRHVLNALKKYIRAEQKDRQHTLKHFEHVRMVDPKKAAQIKSQVMTHLRVIDERMNQSLSLLYKVPSVAEEIQDEVDELLQKEQSYIDDLVANSVSDTRISYGNDALVPSLSETKTTIELLPDDGEFNLDDFQPLHPFEVDSIPANTENEVEPVDARPAPDRGLTTRPGSGLTGIKTEEIAEVKMETEFRQDSGYEVHHQKLVFFPEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
SIO_010081: appa
subclass of: SO_0000673
so part of: appa
location: complement(join(11729580..11729681,11733658..11733804,11738311..11738411,11739193..11739246,11745326..11745547,11749630..11749729,11751074..11751202,11752172..11752330,11752653..11752727,11753009..11753142,11772367..11772534,11783107..11783273,11793234..11793427,11796848..11796960,11818015..11818144,11818580..11818585))
location: region:11729580-11818585:-1
so has part: feature:11818580-11818585:-1:exon
so has part: feature:11818015-11818144:-1:exon
so has part: feature:11796848-11796960:-1:exon
so has part: feature:11793234-11793427:-1:exon
so has part: feature:11783107-11783273:-1:exon
so has part: feature:11772367-11772534:-1:exon
so has part: feature:11753009-11753142:-1:exon
so has part: feature:11752653-11752727:-1:exon
so has part: feature:11752172-11752330:-1:exon
so has part: feature:11751074-11751202:-1:exon
so has part: feature:11749630-11749729:-1:exon
so has part: feature:11745326-11745547:-1:exon
so has part: feature:11739193-11739246:-1:exon
so has part: feature:11738311-11738411:-1:exon
so has part: feature:11733658-11733804:-1:exon
so has part: feature:11729580-11729681:-1:exon

XP_048458906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11818580-11818585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11818015-11818144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11796848-11796960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11793234-11793427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11783107-11783273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11772367-11772534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11753009-11753142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11752653-11752727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11752172-11752330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11751074-11751202:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11749630-11749729:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11745326-11745547:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11739193-11739246:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11738311-11738411:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11733658-11733804:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11729580-11729681:-1:exon

LOC125484391
type: Gene
subclass of: SO_0000704
RO_0002162: 259920
gene: LOC125484391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11929927..11934517
location: region:11929927-11934517:1
so has part: feature:11929927-11934517:1:exon
subclass of: SO_0000011

125484391
type: Gene
SIO_000068: ncbigene

position:11929927:1
position: 11929927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11934517:1
position: 11934517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11929927-11934517:1:exon

LOC125484391
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 259920
nc RNA class: lncRNA
gene: LOC125484391
product: uncharacterized LOC125484391
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007263220.1
SIO_010081: LOC125484391
subclass of: SO_0000673
so part of: LOC125484391
location: join(11929927..11930267,11934053..11934517)
location: region:11929927-11934517:1
so has part: feature:11929927-11930267:1:exon
so has part: feature:11934053-11934517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11929927-11930267:1:exon

position:11930267:1
position: 11930267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11934053-11934517:1:exon