Mangrovibacillus cuniculi strain R1DC41 plasmid pBac41, complete sequence.
type: Entry
definition: Mangrovibacillus cuniculi strain R1DC41 plasmid pBac41, complete sequence.
sequence version: NZ_CP049743.1
sequence date: 2023-03-14
sequence: sequence
division: CON
label: NZ_CP049743.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN12206557
keyword: RefSeq
source: Mangrovibacillus cuniculi
organism: Mangrovibacillus cuniculi
taxonomy: Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Mangrovibacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP049743.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. 1.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100X\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/14/2023 08:52:34\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,226\nCDSs (total) :: 3,105\nGenes (coding) :: 3,060\nCDSs (with protein) :: 3,060\nGenes (RNA) :: 121\nrRNAs :: 12, 12, 12 (5S, 16S, 23S)\ncomplete rRNAs :: 12, 12, 12 (5S, 16S, 23S)\ntRNAs :: 81\nncRNAs :: 4\nPseudo Genes (total) :: 45\nCDSs (without protein) :: 45\nPseudo Genes (ambiguous residues) :: 0 of 45\nPseudo Genes (frameshifted) :: 35 of 45\nPseudo Genes (incomplete) :: 12 of 45\nPseudo Genes (internal stop) :: 1 of 45\nPseudo Genes (multiple problems) :: 3 of 45\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 16645
topology: circular
so has quality: SO_0000988
location: 1..16645
location: region:1-16645:1
RO_0002162: 2593652

NZ_CP049743
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN12206557
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of 2 isolates from Red Sea Mangroves
author: Sefrji, F.
author: Michoud, G.
author: Merlino, G.
author: Daffonchio, D.
journal: Unpublished

2
title: Direct Submission
author: Sefrji, F.
author: Michoud, G.
author: Merlino, G.
author: Daffonchio, D.
journal: Submitted (19-JUL-2019) BESE, KAUST, 4900 KAUST, Thuwal 23955, Saudi Arabia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16645:1
position: 16645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16645:1:source
so part of: sequence
organism: Mangrovibacillus cuniculi
mol type: genomic DNA
strain: R1DC41
isolation source: Sediments
type material: type strain of Mangrovibacillus cuniculi
plasmid: pBac41
country: Saudi Arabia: Coast of Red Sea
lat lon: 22.34 N 39.08 E
collection date: 2017-02

2593652
type: Taxonomy
SIO_000068: taxonomy

G8O30_RS15935
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15935
old locus tag: G8O30_15920
so part of: sequence
location: join(16298..16645,1..156)
location: region:1-16645:1
so has part: feature:16298-16645:1:exon
so has part: feature:1-156:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:16298-16645:1:exon

position:16298:1
position: 16298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-156:1:exon

position:156:1
position: 156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

G8O30_RS15935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15935
old locus tag: G8O30_15920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005836831.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RusA family crossover junction endodeoxyribonuclease
translation: MISFTVYGEPVAQGRPRASTIAGRVRMYDPKKSRDFKQYVKLVAAEHNLRELLEGPLMLTVHIYKPTLKSFSKKKKEAAERGQIRPITKPDVDNYVKGIKDACNKVLWNDDSQIVDKMAQISYYKNFYFTAENGCQTHLQRMAERKAFTNYLGGVLEWQREKMLVTV
SIO_010081: G8O30_RS15935
subclass of: SO_0000673
so part of: G8O30_RS15935
location: join(16298..16645,1..156)
location: region:1-16645:1
so has part: feature:16298-16645:1:exon
so has part: feature:1-156:1:exon

WP_239674586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16298-16645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-156:1:exon

G8O30_RS15940
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15940
old locus tag: G8O30_15925
so part of: sequence
location: 547..879
location: region:547-879:1
so has part: feature:547-879:1:exon
subclass of: SO_0000010

position:547:1
position: 547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879:1
position: 879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547-879:1:exon

G8O30_RS15940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15940
old locus tag: G8O30_15925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKSDHKQVSVKKYLRDIFQEKKLLDKKVAHDFSITPIKDLDNIKINIDFGYKNGVWNYMQTIPTLTGPSKNTEWFAKTKFMFENLEKDTKVILCIDHQKYLMKRNSMVY
SIO_010081: G8O30_RS15940
subclass of: SO_0000673
so part of: G8O30_RS15940
location: 547..879
location: region:547-879:1
so has part: feature:547-879:1:exon

WP_239674587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547-879:1:exon

G8O30_RS16185
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16185
old locus tag: G8O30_15935
so part of: sequence
location: 1718..2323
location: region:1718-2323:1
so has part: feature:1718-2323:1:exon
subclass of: SO_0000010

position:1718:1
position: 1718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323:1
position: 2323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1718-2323:1:exon

G8O30_RS16185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16185
old locus tag: G8O30_15935
inference: COORDINATES: protein motif:HMM:NF025945.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: siphovirus ReqiPepy6 Gp37-like family protein
translation: MDVTQLKYIFDVKLGKNLTVNQNELPPAIFSPKFNSVGKLSYTECDLNYRNAAIVAGQGEGVERRILKVGESEGFDRHELFVDARDVEEVIDDVPVPVQDIVDRLMNRGQQKLAEQQHEFYLEGQTLQKSPLEYEIDYDLGDIVTLQNVEWGVTLDTRITEVKEIFERDGRKIELIFGNRQPTLVDKIKQGFSVFKPEMTR
SIO_010081: G8O30_RS16185
subclass of: SO_0000673
so part of: G8O30_RS16185
location: 1718..2323
location: region:1718-2323:1
so has part: feature:1718-2323:1:exon

WP_275576542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1718-2323:1:exon

G8O30_RS15950
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15950
old locus tag: G8O30_15940
so part of: sequence
location: 2336..2728
location: region:2336-2728:1
so has part: feature:2336-2728:1:exon
subclass of: SO_0000010

position:2336:1
position: 2336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2728:1
position: 2728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336-2728:1:exon

G8O30_RS15950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15950
old locus tag: G8O30_15940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019243635.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MWSTFSELQVIHAYLFGGVRFLDFLALLMLIDIISGVIKAAMQRRLRSRNALYGYARKILIFGVIIMANIIDNMLNLNGTVAFATVLFYIANEGLSILENLAQVGVKVPTVIIDKLHVIQEERKDGDKNG
SIO_010081: G8O30_RS15950
subclass of: SO_0000673
so part of: G8O30_RS15950
location: 2336..2728
location: region:2336-2728:1
so has part: feature:2336-2728:1:exon

WP_239674588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2336-2728:1:exon

G8O30_RS15955
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15955
old locus tag: G8O30_15945
so part of: sequence
location: 2721..3386
location: region:2721-3386:1
so has part: feature:2721-3386:1:exon
subclass of: SO_0000010

position:2721:1
position: 2721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3386:1
position: 3386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2721-3386:1:exon

G8O30_RS15955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15955
old locus tag: G8O30_15945
EC number: 3.5.1.28
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008179355.1
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MVKIKQDLLKSDRYEIKCPNAMFPNFITVHNTANDALAANEIAYMKRNDNQISFHFAVDDKEIIQGIPTNRNAWHCGDGSETNSGNRNSIGIEICYSKSGGERYKKAEKLAIKLIAQLLKQYGWGVDRVKKHQDWNGKYCPHRILDERRWLSFIAEIAKELDVPKIATVKDDVKSHWAENSINKAKDKGIMNGYADGTFGPNDTLTRGQFVSVLDRLGLLE
SIO_010081: G8O30_RS15955
subclass of: SO_0000673
so part of: G8O30_RS15955
location: 2721..3386
location: region:2721-3386:1
so has part: feature:2721-3386:1:exon

WP_275576477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2721-3386:1:exon

G8O30_RS15965
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15965
old locus tag: G8O30_15950
so part of: sequence
location: complement(3416..3679)
location: region:3416-3679:-1
so has part: feature:3416-3679:-1:exon
subclass of: SO_0000010

position:3416:-1
position: 3416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3679:-1
position: 3679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3416-3679:-1:exon

G8O30_RS15965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15965
old locus tag: G8O30_15950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIHLKLKLGIEGHRILRQGVFTVNIVSYKKDPEREAAITSYLWLKSIQREYSGRKIAIEQVLWDGADITNHVRQLKPVEMNNDLPF
SIO_010081: G8O30_RS15965
subclass of: SO_0000673
so part of: G8O30_RS15965
location: complement(3416..3679)
location: region:3416-3679:-1
so has part: feature:3416-3679:-1:exon

WP_239671763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3416-3679:-1:exon

G8O30_RS15970
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15970
old locus tag: G8O30_15955
so part of: sequence
location: 3752..4282
location: region:3752-4282:1
so has part: feature:3752-4282:1:exon
subclass of: SO_0000010

position:3752:1
position: 3752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4282:1
position: 4282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3752-4282:1:exon

G8O30_RS15970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15970
old locus tag: G8O30_15955
inference: COORDINATES: protein motif:HMM:NF038353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stalk domain-containing protein
translation: MKKKVFAVLVILTLTFTAGVMAAPQLKLIINGTPVTSPAPKLIDGSTYVPLRVVSEMLGAEVGWDAKSYTVTVDSEKQPTDGQKVEGFHFHSIDIQDVEHGYHDVYLNVKNNTGKEVRSAYFNLVFYDKSGKVLASELISTGELKNGETKFIDLMVEDKIAGYSSYKFHKDAIYFK
SIO_010081: G8O30_RS15970
subclass of: SO_0000673
so part of: G8O30_RS15970
location: 3752..4282
location: region:3752-4282:1
so has part: feature:3752-4282:1:exon

WP_239671762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3752-4282:1:exon

G8O30_RS15975
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15975
old locus tag: G8O30_15960
so part of: sequence
location: complement(4315..4542)
location: region:4315-4542:-1
so has part: feature:4315-4542:-1:exon
subclass of: SO_0000010

position:4315:-1
position: 4315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4542:-1
position: 4542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4315-4542:-1:exon

G8O30_RS15975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15975
old locus tag: G8O30_15960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019123587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MFSLWGGKPRSRLGKFLDKRGISQNWLAKEAKVNKNTISDLSSGKREPSLATIKKIMKVIREVDPKAKADDFFDI
SIO_010081: G8O30_RS15975
subclass of: SO_0000673
so part of: G8O30_RS15975
location: complement(4315..4542)
location: region:4315-4542:-1
so has part: feature:4315-4542:-1:exon

WP_239671761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4315-4542:-1:exon

G8O30_RS15980
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15980
old locus tag: G8O30_15965
so part of: sequence
location: 4807..5136
location: region:4807-5136:1
so has part: feature:4807-5136:1:exon
subclass of: SO_0000010

position:4807:1
position: 4807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5136:1
position: 5136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4807-5136:1:exon

G8O30_RS15980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15980
old locus tag: G8O30_15965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMTINEFMARKHKNPQYRFPTKWNESIKKTAYPVKLLSISPLVFIDPFMFAIGGGFLFIAFVEKGLEIAELEGVAYYLSGFIRILLPLVGIGFFIHFITTLPFIWWVL
SIO_010081: G8O30_RS15980
subclass of: SO_0000673
so part of: G8O30_RS15980
location: 4807..5136
location: region:4807-5136:1
so has part: feature:4807-5136:1:exon

WP_239671760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4807-5136:1:exon

G8O30_RS15985
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15985
old locus tag: G8O30_15970
so part of: sequence
location: 5133..6284
location: region:5133-6284:1
so has part: feature:5133-6284:1:exon
subclass of: SO_0000010

position:5133:1
position: 5133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6284:1
position: 6284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5133-6284:1:exon

G8O30_RS15985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15985
old locus tag: G8O30_15970
inference: COORDINATES: protein motif:HMM:NF013727.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsK/SpoIIIE domain-containing protein
translation: MSVLQKIVIKSKLRYAFKKASIFTSYKKGTETYLRRPKIHHVDVKEKYVEIVFTLPNGFNPEEMLSKRYVLQQVFGRNLTLEGDLKKFVLKLYFKGLPKEVTYRREELEELCQGIPLPIVCGKDLNGEHVVYDANLSPHLLVSGETGSGKSSLLRVILTTLILSKPVEEVQFILGDLKRSEFGLFRNQSHVRGVYVSPKELLAALKKVNAEILKRGDLLDEHEVTHVEDLPMKVPYIIVAIDEVALLKGESAIMNIIDNIGAVGRSLGVQLILSMQRPDHKLLEGKLKNNLTVRISGRQSNKTNANIAGAEDAHMIKISEKGRMILNLEKLIELQSPWLSYQKAKKLLVPFKTIPTEKGAEVKEKKLLETLPENLLNEEDIIL
SIO_010081: G8O30_RS15985
subclass of: SO_0000673
so part of: G8O30_RS15985
location: 5133..6284
location: region:5133-6284:1
so has part: feature:5133-6284:1:exon

WP_239671759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5133-6284:1:exon

G8O30_RS15990
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15990
old locus tag: G8O30_15975
so part of: sequence
location: 6281..6943
location: region:6281-6943:1
so has part: feature:6281-6943:1:exon
subclass of: SO_0000010

position:6281:1
position: 6281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6943:1
position: 6943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6281-6943:1:exon

G8O30_RS15990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15990
old locus tag: G8O30_15975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: replication-relaxation family protein
translation: MTTRDQAIINDLIKLGCMSRNDVAAIHFGELKDPVRSANSVLKRLVRDGKIKRSRDFVPYVYFPIDSKIKADSTKIPHFLEIVSVYKEMVRIQKPKVFLVEPKYGDKGDYMEPDVFAIWRGTPVFIEVQRTRVTEQTIKEKLERYEAFYESELWKDEAWQPKEKPIFPSVVLLCENKYGVKSDLLHFFEARTISDVIRKPVDIKESQNIIISSSNIKVLR
SIO_010081: G8O30_RS15990
subclass of: SO_0000673
so part of: G8O30_RS15990
location: 6281..6943
location: region:6281-6943:1
so has part: feature:6281-6943:1:exon

WP_239671758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6281-6943:1:exon

G8O30_RS15995
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS15995
old locus tag: G8O30_15980
so part of: sequence
location: 6967..7203
location: region:6967-7203:1
so has part: feature:6967-7203:1:exon
subclass of: SO_0000010

position:6967:1
position: 6967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7203:1
position: 7203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6967-7203:1:exon

G8O30_RS15995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS15995
old locus tag: G8O30_15980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFLVNFMDYAKFDGVKYFLKIVEKDGDLTLMQYQDGSTTCHRKFKTFWDVKEWEVDSDFIYWNRRAINLHLKMIGVKR
SIO_010081: G8O30_RS15995
subclass of: SO_0000673
so part of: G8O30_RS15995
location: 6967..7203
location: region:6967-7203:1
so has part: feature:6967-7203:1:exon

WP_239671757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6967-7203:1:exon

G8O30_RS16000
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16000
so part of: sequence
location: complement(7663..8295)
location: region:7663-8295:-1
so has part: feature:7663-8295:-1:exon
subclass of: SO_0000010

position:7663:-1
position: 7663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8295:-1
position: 8295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7663-8295:-1:exon

G8O30_RS16000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16000
inference: COORDINATES: protein motif:HMM:NF012798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MKEKSTAEKHLSYNETKKLLKELVEHIDRSPLYLLLILAVQSGMRYSELLGLKRTDFNFRSNTINVERAMDYKKGTGLGPLKTEHSERKIEMDTWTMDLFKDYFKKVPSNIQGLVFFNPHSSSGTFSNERANRVLKESLERIGVDPVNVHGLRHTHISILLYKGVNILYVSQRAGHADTNITLSTYAHVIEELQESEVQRTKDILLKIVH
SIO_010081: G8O30_RS16000
subclass of: SO_0000673
so part of: G8O30_RS16000
location: complement(7663..8295)
location: region:7663-8295:-1
so has part: feature:7663-8295:-1:exon

WP_239674589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7663-8295:-1:exon

G8O30_RS16005
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16005
so part of: sequence
location: complement(8328..8765)
location: region:8328-8765:-1
so has part: feature:8328-8765:-1:exon
subclass of: SO_0000010

position:8328:-1
position: 8328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8765:-1
position: 8765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8328-8765:-1:exon

G8O30_RS16005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16005
inference: COORDINATES: protein motif:HMM:NF024502.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Arm DNA-binding domain-containing protein
translation: MASITKRGKTWQFTVSRYVDGKYTPIRKGGFTTKKEAKLAADEVELDLSKGFAASYKSDVFADYFEDWIKDFKSTKARTTVERYQNSLNVVKKEFGATYIQDITKRKYQQFLNAFGESHTKGSVRKLNTHIRACVKEAIDEGKYG
SIO_010081: G8O30_RS16005
subclass of: SO_0000673
so part of: G8O30_RS16005
location: complement(8328..8765)
location: region:8328-8765:-1
so has part: feature:8328-8765:-1:exon

WP_239674583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8328-8765:-1:exon

G8O30_RS16010
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16010
old locus tag: G8O30_15990
so part of: sequence
location: complement(8806..9231)
location: region:8806-9231:-1
so has part: feature:8806-9231:-1:exon
subclass of: SO_0000010

position:8806:-1
position: 8806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9231:-1
position: 9231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8806-9231:-1:exon

G8O30_RS16010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16010
old locus tag: G8O30_15990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014472252.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ImmA/IrrE family metallo-endopeptidase
translation: MEHIERKVQSLIKKHDTNNPLLMAKSLGIQVVFEPLGKTLGYYSKHFRIKVIHINEQLDQEQQSFVCAHELGHAVCHPDSNTPFMKKNTLFSTDRIEQEANAFALSLLFFENDLSSPLTLELAMNKYGIPQKLLRSSHIFF
SIO_010081: G8O30_RS16010
subclass of: SO_0000673
so part of: G8O30_RS16010
location: complement(8806..9231)
location: region:8806-9231:-1
so has part: feature:8806-9231:-1:exon

WP_239671811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8806-9231:-1:exon

G8O30_RS16015
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16015
old locus tag: G8O30_15995
so part of: sequence
location: complement(9363..9710)
location: region:9363-9710:-1
so has part: feature:9363-9710:-1:exon
subclass of: SO_0000010

position:9363:-1
position: 9363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9710:-1
position: 9710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9363-9710:-1:exon

G8O30_RS16015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16015
old locus tag: G8O30_15995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017473905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MNNFGDRLRELRQNKDLSIDELVIKLNSTYNTTISKSMISRYENGQSDPKMENVRVIADYFKVSSDFLLGIEENINLDLSSKLNLKDERDIKKELQKMIDGLEGKMDMQRLTEGL
SIO_010081: G8O30_RS16015
subclass of: SO_0000673
so part of: G8O30_RS16015
location: complement(9363..9710)
location: region:9363-9710:-1
so has part: feature:9363-9710:-1:exon

WP_239674584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9363-9710:-1:exon

G8O30_RS16020
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16020
old locus tag: G8O30_16000
so part of: sequence
location: 9878..10132
location: region:9878-10132:1
so has part: feature:9878-10132:1:exon
subclass of: SO_0000010

position:9878:1
position: 9878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10132:1
position: 10132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9878-10132:1:exon

G8O30_RS16020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16020
old locus tag: G8O30_16000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019712254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSTLDKRNRQPYNKIKAYLVEKNIKHRDVAKLLSIQPNTVSKKLNGFGGDFSLEDAWQMHNELGVPIAYFFEPSVPKKEHRMIS
SIO_010081: G8O30_RS16020
subclass of: SO_0000673
so part of: G8O30_RS16020
location: 9878..10132
location: region:9878-10132:1
so has part: feature:9878-10132:1:exon

WP_239674585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9878-10132:1:exon

G8O30_RS16025
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16025
old locus tag: G8O30_16005
so part of: sequence
location: 10230..10550
location: region:10230-10550:1
so has part: feature:10230-10550:1:exon
subclass of: SO_0000010

position:10230:1
position: 10230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10550:1
position: 10550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10230-10550:1:exon

G8O30_RS16025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16025
old locus tag: G8O30_16005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004230884.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF771 domain-containing protein
translation: MQSLQVSLSVAIPENMVLVQKVELKELREQGLKGVYWSMKDLEQRTSKKHEWIKENILYPSRFRKILDVENGGFVYYPKSKGQTWSFQATKMADFLDKHFKDIYSV
SIO_010081: G8O30_RS16025
subclass of: SO_0000673
so part of: G8O30_RS16025
location: 10230..10550
location: region:10230-10550:1
so has part: feature:10230-10550:1:exon

WP_239671808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10230-10550:1:exon

G8O30_RS16030
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16030
old locus tag: G8O30_16010
pseudo: true
so part of: sequence
location: 10680..>10872
location: region:10680-10872:1
so has part: feature:10680-10872:1:exon
subclass of: SO_0000010

position:10680:1
position: 10680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10872:1
position: 10872
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10680-10872:1:exon

G8O30_RS16030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16030
old locus tag: G8O30_16010
inference: COORDINATES: protein motif:HMM:TIGR02681.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
SIO_010081: G8O30_RS16030
subclass of: SO_0000673
so part of: G8O30_RS16030
location: 10680..>10872
location: region:10680-10872:1
so has part: feature:10680-10872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10680-10872:1:exon

G8O30_RS16035
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16035
old locus tag: G8O30_16015
so part of: sequence
location: 10873..11277
location: region:10873-11277:1
so has part: feature:10873-11277:1:exon
subclass of: SO_0000010

position:10873:1
position: 10873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11277:1
position: 11277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10873-11277:1:exon

G8O30_RS16035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16035
old locus tag: G8O30_16015
inference: COORDINATES: protein motif:HMM:NF022027.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ORF6C domain-containing protein
translation: MEFKEQYIELFEQMEDELKRPRVLSEREQLMASMKLSLETAEEIGAVKNEVKEIRGMVENQITLDHGEQRRLQKAVAQRIYLQTRDPVLRNRFFRELYRELKDRFGTASYKDIKRKDMLAAIRYIEGWIPRKVS
SIO_010081: G8O30_RS16035
subclass of: SO_0000673
so part of: G8O30_RS16035
location: 10873..11277
location: region:10873-11277:1
so has part: feature:10873-11277:1:exon

WP_239674531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10873-11277:1:exon

G8O30_RS16040
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16040
old locus tag: G8O30_16020
so part of: sequence
location: 11290..11538
location: region:11290-11538:1
so has part: feature:11290-11538:1:exon
subclass of: SO_0000010

position:11290:1
position: 11290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11538:1
position: 11538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11290-11538:1:exon

G8O30_RS16040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16040
old locus tag: G8O30_16020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGKVEFIAERLALRQEDVPNAVIHANSVLYYIKKLAPTFISLDFGEVRRCMTMIDIHLQAIERLQRMQREVRKREHSNRLH
SIO_010081: G8O30_RS16040
subclass of: SO_0000673
so part of: G8O30_RS16040
location: 11290..11538
location: region:11290-11538:1
so has part: feature:11290-11538:1:exon

WP_239671807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11290-11538:1:exon

G8O30_RS16045
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16045
old locus tag: G8O30_16025
so part of: sequence
location: 11513..11743
location: region:11513-11743:1
so has part: feature:11513-11743:1:exon
subclass of: SO_0000010

position:11513:1
position: 11513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11743:1
position: 11743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11513-11743:1:exon

G8O30_RS16045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16045
old locus tag: G8O30_16025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIQTDYTNPTWREFQRLLLTEARMTEDIEVWTNAGYSATARSLKRQRTFVSIRRRIMKVAINEHKKTASGATLTA
SIO_010081: G8O30_RS16045
subclass of: SO_0000673
so part of: G8O30_RS16045
location: 11513..11743
location: region:11513-11743:1
so has part: feature:11513-11743:1:exon

WP_239671806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11513-11743:1:exon

G8O30_RS16050
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16050
old locus tag: G8O30_16030
so part of: sequence
location: 11928..12194
location: region:11928-12194:1
so has part: feature:11928-12194:1:exon
subclass of: SO_0000010

position:11928:1
position: 11928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12194:1
position: 12194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11928-12194:1:exon

G8O30_RS16050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16050
old locus tag: G8O30_16030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002205089.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MKATGVVRKIDQLGRVVLPMELRRTRGIEEGNPIEIFVDGESIILRKYAPVTTEKSKVISSMRALVKSEKDPNVKETLEQALVFLGKE
SIO_010081: G8O30_RS16050
subclass of: SO_0000673
so part of: G8O30_RS16050
location: 11928..12194
location: region:11928-12194:1
so has part: feature:11928-12194:1:exon

WP_239671805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11928-12194:1:exon

G8O30_RS16055
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16055
old locus tag: G8O30_16035
so part of: sequence
location: 12207..12422
location: region:12207-12422:1
so has part: feature:12207-12422:1:exon
subclass of: SO_0000010

position:12207:1
position: 12207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12422:1
position: 12422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12207-12422:1:exon

G8O30_RS16055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16055
old locus tag: G8O30_16035
inference: COORDINATES: protein motif:HMM:NF021016.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDHPVVKNLESIGHASLEDFKNESVGNDYFGNEIMFGDEIVLDPMTGGTVLRESLSEYLEEQYGFAFREAK
SIO_010081: G8O30_RS16055
subclass of: SO_0000673
so part of: G8O30_RS16055
location: 12207..12422
location: region:12207-12422:1
so has part: feature:12207-12422:1:exon

WP_239671804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12207-12422:1:exon

G8O30_RS16060
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16060
old locus tag: G8O30_16040
so part of: sequence
location: 12516..13466
location: region:12516-13466:1
so has part: feature:12516-13466:1:exon
subclass of: SO_0000010

position:12516:1
position: 12516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13466:1
position: 13466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12516-13466:1:exon

G8O30_RS16060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16060
old locus tag: G8O30_16040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017435115.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaJ viral recombinase family protein
translation: MSAITLYSTVNMTREQWLQARTEGIGGSDSSIILGINKWKTPFELWLEKTGQVLPAEIENDVIYFGNVLEDLVAEEFTRRSGKKVRKKNAILQHPEHSFMLANVDGVIVGEKAVLECKTTSAYNAKEWEDDEIPAAYLIQIQHYLAVLGPEYEKAYIAVLIGGQKFVWKEIARDEELITIITNEEKYFWEHHVLANNPPKLDGSSAAEKYIKEKYDRAAEGKVIDLGTDDKQAIDDYLHLKESIDALQKQMKEYENQIKLSLGDAELGQVQDKLVTWKNVVSNRVDSKQLKANYPDIYKAVTKESYSRRFTIKDIG
SIO_010081: G8O30_RS16060
subclass of: SO_0000673
so part of: G8O30_RS16060
location: 12516..13466
location: region:12516-13466:1
so has part: feature:12516-13466:1:exon

WP_239671803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12516-13466:1:exon

G8O30_RS16065
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16065
old locus tag: G8O30_16045
so part of: sequence
location: 13477..14289
location: region:13477-14289:1
so has part: feature:13477-14289:1:exon
subclass of: SO_0000010

position:13477:1
position: 13477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14289:1
position: 14289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13477-14289:1:exon

G8O30_RS16065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16065
old locus tag: G8O30_16045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015382935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase RecT
translation: MATNSSVKNQLVNKQSTNVQGATLKGLLASPAVLNRFEEVLGKRASQFTASILSLYNSESMLQKSEPMSVISSAMIAATLDLPVDKNLGYAWIVPYKGKAQFQLGYKGYIQLALRTGQYRFINVTPIHEGELVKWNPLTEEIDIDFEMRSSDKVIGYAAFFELLNGFKKTVYWTKEQVEKHKQKFSKSDFGWKNDWDAMAMKTVLKAILSKWGILSIEMQTAVVEDDREPEMKDITEQVDNTIEYPFDLDATEMKEAAQEALDMDFDVKE
SIO_010081: G8O30_RS16065
subclass of: SO_0000673
so part of: G8O30_RS16065
location: 13477..14289
location: region:13477-14289:1
so has part: feature:13477-14289:1:exon

WP_239671802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13477-14289:1:exon

G8O30_RS16070
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16070
old locus tag: G8O30_16050
so part of: sequence
location: 14465..15178
location: region:14465-15178:1
so has part: feature:14465-15178:1:exon
subclass of: SO_0000010

position:14465:1
position: 14465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15178:1
position: 15178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14465-15178:1:exon

G8O30_RS16070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16070
old locus tag: G8O30_16050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015382936.1
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaD domain protein
translation: MNYVKELNAFYEWLETNPLNSGAIVLWYTLMAVNNKTGWKGEFTIANMALQAKTGLSRQQLDRARTELITSNRIIYKKSGKANKAGSYSIVSFDTQNAHKADTGRTHDEHEVTTLVKHKQNKTKLDDEDKARTRDSQNPFIFFEQEGFGTISSFTAERLGSLIDDFGEEKVLRAMQESVLNGARNLKYVQAILNNPKAKGGKANEQKYRRGVAATTEPRTDPLLGDRVGWIKPTTRR
SIO_010081: G8O30_RS16070
subclass of: SO_0000673
so part of: G8O30_RS16070
location: 14465..15178
location: region:14465-15178:1
so has part: feature:14465-15178:1:exon

WP_239671801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14465-15178:1:exon

G8O30_RS16075
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16075
old locus tag: G8O30_16055
pseudo: true
so part of: sequence
location: 15075..15889
location: region:15075-15889:1
so has part: feature:15075-15889:1:exon
subclass of: SO_0000010

position:15075:1
position: 15075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15889:1
position: 15889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15075-15889:1:exon

G8O30_RS16075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16075
old locus tag: G8O30_16055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011197802.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: G8O30_RS16075
subclass of: SO_0000673
so part of: G8O30_RS16075
location: 15075..15889
location: region:15075-15889:1
so has part: feature:15075-15889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15075-15889:1:exon

G8O30_RS16190
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
locus tag: G8O30_RS16190
so part of: sequence
location: 15882..16013
location: region:15882-16013:1
so has part: feature:15882-16013:1:exon
subclass of: SO_0000010

position:15882:1
position: 15882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16013:1
position: 16013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15882-16013:1:exon

G8O30_RS16190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
locus tag: G8O30_RS16190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCNVCRGKGVLYVDSAIGMTLIQSCEFVPLKKEQPLWKDVRNV
SIO_010081: G8O30_RS16190
subclass of: SO_0000673
so part of: G8O30_RS16190
location: 15882..16013
location: region:15882-16013:1
so has part: feature:15882-16013:1:exon

WP_275576541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15882-16013:1:exon

G8O30_RS16080
type: Gene
subclass of: SO_0000704
RO_0002162: 2593652
gene: fbpA
locus tag: G8O30_RS16080
old locus tag: G8O30_16060
so part of: sequence
location: 16059..16283
location: region:16059-16283:1
so has part: feature:16059-16283:1:exon
subclass of: SO_0000010

position:16059:1
position: 16059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16283:1
position: 16283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16059-16283:1:exon

G8O30_RS16080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2593652
gene: fbpA
locus tag: G8O30_RS16080
old locus tag: G8O30_16060
inference: COORDINATES: protein motif:HMM:NF024476.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fur-regulated basic protein FbpA
translation: MQRVDESQNKQDVRRSYLTDWLIKHQFIKHPDGRQLFELSLVELEQNYIHLRCQKGKQLAIRQSEDRFKFVAVN
SIO_010081: G8O30_RS16080
subclass of: SO_0000673
so part of: G8O30_RS16080
location: 16059..16283
location: region:16059-16283:1
so has part: feature:16059-16283:1:exon

WP_239671798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16059-16283:1:exon