Paenalkalicoccus suaedae strain M4U3P1 plasmid unnamed2, complete sequence.
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Paenalkalicoccus.
Bacillus alkalisoli sp. nov. isolated from saline soil
Submitted (03-JUL-2019) School of Ecology and Environment, Inner Mongolia University, Daxuexijie #235, Hohhot, Inner Mongolia 010021, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP041371.1.\nBacteria and source DNA available from Ji-Quan Sun.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. 2.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 300.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/27/2023 03:24:52\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,005\nCDSs (total) :: 3,907\nGenes (coding) :: 3,890\nCDSs (with protein) :: 3,890\nGenes (RNA) :: 98\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 71\nncRNAs :: 5\nPseudo Genes (total) :: 17\nCDSs (without protein) :: 17\nPseudo Genes (ambiguous residues) :: 0 of 17\nPseudo Genes (frameshifted) :: 4 of 17\nPseudo Genes (incomplete) :: 11 of 17\nPseudo Genes (internal stop) :: 3 of 17\nPseudo Genes (multiple problems) :: 1 of 17\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_014475552.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017473913.1
COORDINATES: similar to AA sequence:RefSeq:WP_015388801.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890185.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255099.1
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010890187.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]