Paraburkholderia acidisoli strain DHF22 chromosome 4, complete sequence.
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia.
Paraburkholderia acidiphila 7Q-K02 sp. nov and Paraburkholderia acidisoli DHF22 sp. nov., two strains isolated from forest soil
Submitted (15-DEC-2019) School of Life Sciences, Sun Yat-sen University, No.135,Xinggang West Road, Guangzhou, Guangdong 510275, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP046916.1.\nBacteria and source DNA available from State Key Laboratory of\nBiocontrol, School of Life Sciences, Sun Yat-sen University.\naddress:135 Xingang Road, W., Guangzhou 510275, P. R. China.\n\nAssembly not circularized.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 15-FEB-2019\nAssembly Method :: canu v. 1.7.11\nAssembly Name :: SYSU_PbDHF22_1.7.11\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 272.0x\nSequencing Technology :: Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 06:27:45\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,109\nCDSs (total) :: 7,017\nGenes (coding) :: 6,923\nCDSs (with protein) :: 6,923\nGenes (RNA) :: 92\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 4\nPseudo Genes (total) :: 94\nCDSs (without protein) :: 94\nPseudo Genes (ambiguous residues) :: 0 of 94\nPseudo Genes (frameshifted) :: 26 of 94\nPseudo Genes (incomplete) :: 75 of 94\nPseudo Genes (internal stop) :: 2 of 94\nPseudo Genes (multiple problems) :: 8 of 94\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Paraburkholderia acidisoli
COORDINATES: similar to AA sequence:RefSeq:WP_011298960.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018423813.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013092618.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_006765577.1
HrpB1 family type III secretion system apparatus protein
COORDINATES: protein motif:HMM:NF021153.2
COORDINATES: protein motif:HMM:NF023363.2
COORDINATES: similar to AA sequence:RefSeq:WP_017775672.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775671.1
type III secretion system outer membrane ring subunit SctC
COORDINATES: similar to AA sequence:RefSeq:WP_013592477.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018314638.1
GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
type III secretion system export apparatus subunit SctT
COORDINATES: protein motif:HMM:NF021035.2
COORDINATES: similar to AA sequence:RefSeq:WP_020070012.1
GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020070013.1
type III secretion system stator protein SctL
COORDINATES: protein motif:HMM:NF021051.2
COORDINATES: similar to AA sequence:RefSeq:WP_004542363.1
type III secretion inner membrane ring lipoprotein SctJ
COORDINATES: protein motif:HMM:NF021036.2
COORDINATES: similar to AA sequence:RefSeq:WP_007736558.1
COORDINATES: similar to AA sequence:RefSeq:WP_013428970.1
type III secretion system export apparatus subunit SctU
COORDINATES: similar to AA sequence:RefSeq:WP_013341117.1
GO:0009306 - protein secretion [Evidence IEA]
type III secretion system export apparatus subunit SctV
COORDINATES: protein motif:HMM:TIGR02557.2
COORDINATES: protein motif:HMM:TIGR02551.1
type III secretion system cytoplasmic ring protein SctQ
COORDINATES: similar to AA sequence:RefSeq:WP_004524345.1
type III secretion system export apparatus subunit SctR
COORDINATES: similar to AA sequence:RefSeq:WP_013689080.1
type III secretion system export apparatus subunit SctS
COORDINATES: similar to AA sequence:RefSeq:WP_013341124.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070028.1
COORDINATES: similar to AA sequence:RefSeq:WP_009968769.1
CesT family type III secretion system chaperone
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011549218.1
COORDINATES: protein motif:HMM:NF013700.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008346097.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404757.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017775528.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020654493.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775526.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008346098.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008346099.1
COORDINATES: similar to AA sequence:RefSeq:WP_018436762.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008346102.1
FadR/GntR family transcriptional regulator
COORDINATES: protein motif:HMM:NF019023.2
COORDINATES: similar to AA sequence:RefSeq:WP_015875804.1
L-arabinose ABC transporter permease AraH
COORDINATES: similar to AA sequence:RefSeq:WP_017775820.1
GO:0015612 - ABC-type L-arabinose transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0042882 - L-arabinose transmembrane transport [Evidence IEA]
L-arabinose ABC transporter ATP-binding protein AraG
COORDINATES: similar to AA sequence:RefSeq:WP_006050617.1
arabinose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013690121.1
COORDINATES: similar to AA sequence:RefSeq:WP_012339099.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012367127.1
COORDINATES: similar to AA sequence:RefSeq:WP_006494293.1
COORDINATES: similar to AA sequence:RefSeq:WP_010098487.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018440656.1
COORDINATES: similar to AA sequence:RefSeq:WP_006766806.1
COORDINATES: similar to AA sequence:RefSeq:WP_018437944.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007586437.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545775.1
COORDINATES: similar to AA sequence:RefSeq:WP_017772498.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405626.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582299.1
COORDINATES: similar to AA sequence:RefSeq:WP_015876251.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666385.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582305.1
COORDINATES: similar to AA sequence:RefSeq:WP_012399556.1
COORDINATES: similar to AA sequence:RefSeq:WP_007576717.1
COORDINATES: similar to AA sequence:RefSeq:WP_019938451.1
COORDINATES: similar to AA sequence:RefSeq:WP_008922009.1
COORDINATES: similar to AA sequence:RefSeq:WP_018417826.1
COORDINATES: similar to AA sequence:RefSeq:WP_011486891.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049527.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007587035.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343003.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769676.1
CmpA/NrtA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013691385.1
COORDINATES: similar to AA sequence:RefSeq:WP_006397724.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587698.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014253054.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253055.1
GO:0016840 - carbon-nitrogen lyase activity [Evidence IEA]
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014726186.1
COORDINATES: similar to AA sequence:RefSeq:WP_013697306.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194508.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049861.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423368.1
extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020066399.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012405740.1
COORDINATES: similar to AA sequence:RefSeq:WP_007745492.1
COORDINATES: similar to AA sequence:RefSeq:WP_004528605.1
COORDINATES: protein motif:HMM:NF025605.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF025214.2
COORDINATES: similar to AA sequence:RefSeq:WP_009968994.1
COORDINATES: similar to AA sequence:RefSeq:WP_010093537.1
COORDINATES: similar to AA sequence:RefSeq:WP_011326176.1
COORDINATES: similar to AA sequence:RefSeq:WP_018903958.1
COORDINATES: similar to AA sequence:RefSeq:WP_006755726.1
COORDINATES: similar to AA sequence:RefSeq:WP_019447797.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_007176935.1
COORDINATES: similar to AA sequence:RefSeq:WP_007176124.1
COORDINATES: similar to AA sequence:RefSeq:WP_006496050.1
COORDINATES: similar to AA sequence:RefSeq:WP_006496051.1
COORDINATES: similar to AA sequence:RefSeq:WP_013698358.1
COORDINATES: similar to AA sequence:RefSeq:WP_013698357.1
COORDINATES: similar to AA sequence:RefSeq:WP_013698356.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013698355.1
COORDINATES: similar to AA sequence:RefSeq:WP_008921658.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_013394917.1
COORDINATES: similar to AA sequence:RefSeq:WP_008920291.1
COORDINATES: similar to AA sequence:RefSeq:WP_008920292.1
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: similar to AA sequence:RefSeq:WP_013089585.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011875474.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_017424107.1
COORDINATES: similar to AA sequence:RefSeq:WP_006753023.1
COORDINATES: similar to AA sequence:RefSeq:WP_014896683.1
COORDINATES: similar to AA sequence:RefSeq:WP_017776490.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009902351.1
COORDINATES: similar to AA sequence:RefSeq:WP_017776493.1
COORDINATES: similar to AA sequence:RefSeq:WP_006753719.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017423278.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006490792.1
COORDINATES: similar to AA sequence:RefSeq:WP_006478810.1
COORDINATES: similar to AA sequence:RefSeq:WP_017423798.1
COORDINATES: similar to AA sequence:RefSeq:WP_017776500.1
COORDINATES: similar to AA sequence:RefSeq:WP_012431896.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691200.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00080
yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012733665.1
COORDINATES: similar to AA sequence:RefSeq:WP_013699628.1
COORDINATES: similar to AA sequence:RefSeq:WP_005662901.1
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: similar to AA sequence:RefSeq:WP_011489952.1
sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB
COORDINATES: similar to AA sequence:RefSeq:WP_018315382.1
COORDINATES: similar to AA sequence:RefSeq:WP_018006004.1
COORDINATES: similar to AA sequence:RefSeq:WP_006157114.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193577.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193578.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193579.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007744882.1
COORDINATES: similar to AA sequence:RefSeq:WP_018444231.1
2-hydroxycarboxylate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007578563.1
COORDINATES: similar to AA sequence:RefSeq:WP_007578564.1
high frequency lysogenization protein HflD
COORDINATES: similar to AA sequence:RefSeq:WP_013690114.1
COORDINATES: similar to AA sequence:RefSeq:WP_014899354.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690478.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012251599.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013339003.1
COORDINATES: similar to AA sequence:RefSeq:WP_007578964.1
COORDINATES: similar to AA sequence:RefSeq:WP_009667775.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007580902.1
COORDINATES: similar to AA sequence:RefSeq:WP_013394318.1
COORDINATES: similar to AA sequence:RefSeq:WP_008922546.1
COORDINATES: similar to AA sequence:RefSeq:WP_014191017.1
COORDINATES: similar to AA sequence:RefSeq:WP_007736326.1
COORDINATES: similar to AA sequence:RefSeq:WP_012431271.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049290.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009769654.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008119801.1
COORDINATES: similar to AA sequence:RefSeq:WP_013436547.1
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008110952.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177631.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018423298.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_012403224.1
COORDINATES: similar to AA sequence:RefSeq:WP_014191621.1
COORDINATES: similar to AA sequence:RefSeq:WP_006025026.1
COORDINATES: similar to AA sequence:RefSeq:WP_004630432.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177978.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691356.1
COORDINATES: similar to AA sequence:RefSeq:WP_012403787.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049497.1
COORDINATES: similar to AA sequence:RefSeq:WP_011659808.1
COORDINATES: similar to AA sequence:RefSeq:WP_018444333.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012426403.1
COORDINATES: similar to AA sequence:RefSeq:WP_011354960.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014900233.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422325.1
type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014900498.1
COORDINATES: similar to AA sequence:RefSeq:WP_009908260.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010109110.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010089438.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006027103.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007588802.1
bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018079686.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493322.1
COORDINATES: similar to AA sequence:RefSeq:WP_019447723.1
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF015297.2
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004770.0
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010098432.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341468.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010110715.1
COORDINATES: similar to AA sequence:RefSeq:WP_013803243.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019451284.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011482103.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011301320.1
COORDINATES: similar to AA sequence:RefSeq:WP_013951921.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049440.1
COORDINATES: similar to AA sequence:RefSeq:WP_007589788.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404778.1
COORDINATES: similar to AA sequence:RefSeq:WP_013089540.1
COORDINATES: similar to AA sequence:RefSeq:WP_012339127.1
COORDINATES: similar to AA sequence:RefSeq:WP_012429007.1
COORDINATES: similar to AA sequence:RefSeq:WP_012429008.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011492787.1
COORDINATES: similar to AA sequence:RefSeq:WP_012429010.1
COORDINATES: similar to AA sequence:RefSeq:WP_018902921.1
ribulose-bisphosphate carboxylase large subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012429012.1
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014724087.1
COORDINATES: similar to AA sequence:RefSeq:WP_007744484.1
COORDINATES: similar to AA sequence:RefSeq:WP_007734219.1
COORDINATES: similar to AA sequence:RefSeq:WP_008922432.1
COORDINATES: similar to AA sequence:RefSeq:WP_012426631.1
COORDINATES: similar to AA sequence:RefSeq:WP_006414584.1
COORDINATES: similar to AA sequence:RefSeq:WP_011352878.1
GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO:0009297 - pilus assembly [Evidence IEA]
fimbria/pilus outer membrane usher protein
COORDINATES: similar to AA sequence:RefSeq:WP_006414572.1
COORDINATES: similar to AA sequence:RefSeq:WP_012432305.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488810.1
COORDINATES: similar to AA sequence:RefSeq:WP_008113815.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691051.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177486.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015877936.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483303.1
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007583782.1
COORDINATES: similar to AA sequence:RefSeq:WP_006161006.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_013697522.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919989.1
COORDINATES: similar to AA sequence:RefSeq:WP_013211818.1
COORDINATES: similar to AA sequence:RefSeq:WP_006492912.1
COORDINATES: protein motif:HMM:NF012517.2
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_011492244.1
H-NS family nucleoid-associated regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_006050640.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_006050639.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050638.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050637.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050636.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050635.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_006387069.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092629.1
cystathionine gamma-synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014006306.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427688.1
COORDINATES: similar to AA sequence:RefSeq:WP_019657212.1
COORDINATES: similar to AA sequence:RefSeq:WP_019575858.1
COORDINATES: similar to AA sequence:RefSeq:WP_008117872.1
COORDINATES: similar to AA sequence:RefSeq:WP_013542488.1
COORDINATES: similar to AA sequence:RefSeq:WP_007834908.1
COORDINATES: similar to AA sequence:RefSeq:WP_012733521.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489874.1
COORDINATES: similar to AA sequence:RefSeq:WP_012401327.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: protein motif:HMM:NF013052.2
GO:0005515 - protein binding [Evidence IEA]
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012405979.1
COORDINATES: similar to AA sequence:RefSeq:WP_006767106.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018425341.1
COORDINATES: similar to AA sequence:RefSeq:WP_018425340.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093753.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF012673.2
3'(2'),5'-bisphosphate nucleotidase CysQ
COORDINATES: protein motif:HMM:NF015747.2
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014723898.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880679.1
COORDINATES: similar to AA sequence:RefSeq:WP_014723900.1
COORDINATES: similar to AA sequence:RefSeq:WP_020066598.1
GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]
GO:0046416 - D-amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007175791.1
COORDINATES: similar to AA sequence:RefSeq:WP_011883609.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428244.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046936.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014007121.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049326.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093697.1
COORDINATES: similar to AA sequence:RefSeq:WP_012338755.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_012338757.1
COORDINATES: similar to AA sequence:RefSeq:WP_012733908.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341162.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067826.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005670491.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017777479.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_008906460.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017424925.1
COORDINATES: similar to AA sequence:RefSeq:WP_007880381.1
COORDINATES: similar to AA sequence:RefSeq:WP_007180859.1
COORDINATES: similar to AA sequence:RefSeq:WP_006391731.1
COORDINATES: similar to AA sequence:RefSeq:WP_015876933.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493201.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490622.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490675.1
COORDINATES: similar to AA sequence:RefSeq:WP_015012619.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427904.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738088.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405076.1
COORDINATES: similar to AA sequence:RefSeq:WP_013696662.1
ParB/Srx family N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013092729.1
COORDINATES: similar to AA sequence:RefSeq:WP_013689732.1
type VI secretion system Vgr family protein
COORDINATES: protein motif:HMM:NF024894.2
COORDINATES: similar to AA sequence:RefSeq:WP_003265709.1
COORDINATES: similar to AA sequence:RefSeq:WP_015875847.1
COORDINATES: similar to AA sequence:RefSeq:WP_006495158.1
GO:0004629 - phospholipase C activity [Evidence IEA]
phospholipase C, phosphocholine-specific
COORDINATES: similar to AA sequence:RefSeq:WP_004195141.1
COORDINATES: similar to AA sequence:RefSeq:WP_020200793.1
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: similar to AA sequence:RefSeq:WP_011547500.1
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF014585.2
hydantoinase B/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF018513.2
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013413.2
GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF015445.2
COORDINATES: protein motif:HMM:NF025694.2
COORDINATES: similar to AA sequence:RefSeq:WP_012402521.1
COORDINATES: similar to AA sequence:RefSeq:WP_017335630.1
COORDINATES: similar to AA sequence:RefSeq:WP_017331866.1
COORDINATES: similar to AA sequence:RefSeq:WP_012426533.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422689.1
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016347231.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067751.1
COORDINATES: similar to AA sequence:RefSeq:WP_009242106.1
COORDINATES: similar to AA sequence:RefSeq:WP_018907302.1
COORDINATES: similar to AA sequence:RefSeq:WP_007747985.1
COORDINATES: similar to AA sequence:RefSeq:WP_008354373.1
COORDINATES: similar to AA sequence:RefSeq:WP_013395154.1
COORDINATES: similar to AA sequence:RefSeq:WP_011239965.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013339485.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404061.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404062.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404063.1
COORDINATES: similar to AA sequence:RefSeq:WP_008346732.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577590.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013429060.1
COORDINATES: similar to AA sequence:RefSeq:WP_009549637.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012426641.1
COORDINATES: similar to AA sequence:RefSeq:WP_006765648.1
TetR-like C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013341562.1
COORDINATES: similar to AA sequence:RefSeq:WP_019656988.1
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: similar to AA sequence:RefSeq:WP_006220019.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006164313.1
GO:0018817 - 2-oxo-hept-3-ene-1,7-dioate hydratase activity [Evidence IEA]
2-oxo-hepta-3-ene-1,7-dioic acid hydratase
COORDINATES: similar to AA sequence:RefSeq:WP_006225178.1
COORDINATES: similar to AA sequence:RefSeq:WP_013596531.1
COORDINATES: similar to AA sequence:RefSeq:WP_020651387.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403947.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403946.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050429.1
phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024996.2
COORDINATES: similar to AA sequence:RefSeq:WP_006298546.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579104.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490923.1
COORDINATES: similar to AA sequence:RefSeq:WP_013956661.1
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: similar to AA sequence:RefSeq:WP_019574923.1
COORDINATES: similar to AA sequence:RefSeq:WP_011547372.1
COORDINATES: similar to AA sequence:RefSeq:WP_019426551.1
COORDINATES: similar to AA sequence:RefSeq:WP_017453485.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:TIGR01414.1
GO:0015474 - autotransporter activity [Evidence IEA]
GO:0046819 - protein secretion by the type V secretion system [Evidence IEA]
autotransporter outer membrane beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012336737.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_011355910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011808888.1
COORDINATES: similar to AA sequence:RefSeq:WP_006396182.1
COORDINATES: protein motif:HMM:NF003642.0
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013353.2
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: similar to AA sequence:RefSeq:WP_003820174.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017235512.1
COORDINATES: similar to AA sequence:RefSeq:WP_017235513.1
COORDINATES: similar to AA sequence:RefSeq:WP_013743805.1
COORDINATES: similar to AA sequence:RefSeq:WP_018904247.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492163.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494235.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494234.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011494233.1
aromatic-ring-hydroxylating dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012365540.1
non-heme iron oxygenase ferredoxin subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007740382.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492157.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492156.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494228.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492154.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011494226.1
COORDINATES: similar to AA sequence:RefSeq:WP_011617876.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494224.1
COORDINATES: similar to AA sequence:RefSeq:WP_012431185.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494222.1
COORDINATES: similar to AA sequence:RefSeq:WP_012431187.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492147.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494219.1
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: protein motif:HMM:TIGR03074.1
GO:0016020 - membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
COORDINATES: similar to AA sequence:RefSeq:WP_012427629.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427630.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427631.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046745.1
GO:0016901 - oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor [Evidence IEA]
GO:0006089 - lactate metabolic process [Evidence IEA]; GO:0019516 - lactate oxidation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019845.2
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF015682.2
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF006941.0
COORDINATES: similar to AA sequence:RefSeq:WP_012366410.1
COORDINATES: protein motif:HMM:NF012935.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF021778.2
COORDINATES: similar to AA sequence:RefSeq:WP_006390593.1
COORDINATES: protein motif:HMM:NF008398.0
COORDINATES: similar to AA sequence:RefSeq:WP_006461821.1
2,4'-dihydroxyacetophenone dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018438031.1
COORDINATES: similar to AA sequence:RefSeq:WP_008342892.1
COORDINATES: similar to AA sequence:RefSeq:WP_008326066.1
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013486.2
aminopeptidase P family N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015905.2
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011491518.1
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011615143.1
COORDINATES: similar to AA sequence:RefSeq:WP_018574163.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193505.1
COORDINATES: similar to AA sequence:RefSeq:WP_012416639.1
COORDINATES: similar to AA sequence:RefSeq:WP_015014072.1
COORDINATES: similar to AA sequence:RefSeq:WP_012745958.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158230.1
isocitrate lyase/phosphoenolpyruvate mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008919514.1
COORDINATES: similar to AA sequence:RefSeq:WP_004189750.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007178454.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490649.1
electron transfer flavoprotein-ubiquinone oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_011003043.1
COORDINATES: similar to AA sequence:RefSeq:WP_006476012.1
COORDINATES: protein motif:HMM:NF013014.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_006757898.1
COORDINATES: similar to AA sequence:RefSeq:WP_018424760.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400084.1
COORDINATES: similar to AA sequence:RefSeq:WP_006225977.1
COORDINATES: similar to AA sequence:RefSeq:WP_007589369.1
COORDINATES: similar to AA sequence:RefSeq:WP_013802318.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691224.1
COORDINATES: similar to AA sequence:RefSeq:WP_007733111.1
COORDINATES: similar to AA sequence:RefSeq:WP_006766084.1
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014193977.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049277.1
aldo/keto reductase family oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007176668.1
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012401251.1
COORDINATES: similar to AA sequence:RefSeq:WP_003268744.1
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006403370.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006403367.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403366.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403365.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403362.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403361.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403349.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403348.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403347.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403346.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403345.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403344.1
COORDINATES: protein motif:HMM:NF022224.2
COORDINATES: protein motif:HMM:NF018769.2
COORDINATES: similar to AA sequence:RefSeq:WP_015013480.1
COORDINATES: similar to AA sequence:RefSeq:WP_019573331.1
COORDINATES: protein motif:HMM:TIGR02220.1
conserved phage C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003056767.1
COORDINATES: similar to AA sequence:RefSeq:WP_006027873.1
COORDINATES: protein motif:HMM:NF024784.2
COORDINATES: similar to AA sequence:RefSeq:WP_018315037.1
COORDINATES: similar to AA sequence:RefSeq:WP_012747545.1
COORDINATES: similar to AA sequence:RefSeq:WP_020748864.1
COORDINATES: similar to AA sequence:RefSeq:WP_020748857.1
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012436162.1
COORDINATES: similar to AA sequence:RefSeq:WP_006407505.1
COORDINATES: protein motif:HMM:NF025712.2
Lar family restriction alleviation protein
COORDINATES: protein motif:HMM:NF019442.2
COORDINATES: protein motif:HMM:NF020572.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008907 - integrase activity [Evidence IEA]
GO:0015074 - DNA integration [Evidence IEA]
phage integrase Arm DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_006403364.1
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006403358.1
COORDINATES: similar to AA sequence:RefSeq:WP_006403353.1
COORDINATES: similar to AA sequence:RefSeq:WP_017773822.1
COORDINATES: protein motif:HMM:NF024872.2
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: similar to AA sequence:RefSeq:WP_016344440.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049673.1
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_018443965.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582297.1
tannase/feruloyl esterase family alpha/beta hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_007582295.1
autotransporter domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011656368.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405537.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_012405123.1
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007735805.1
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: similar to AA sequence:RefSeq:WP_010106837.1
type IVB secretion system protein IcmH/DotU
COORDINATES: similar to AA sequence:RefSeq:WP_006409507.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system baseplate subunit TssK
COORDINATES: similar to AA sequence:RefSeq:WP_013592092.1
type VI secretion system lipoprotein TssJ
COORDINATES: similar to AA sequence:RefSeq:WP_004531875.1
COORDINATES: similar to AA sequence:RefSeq:WP_014898257.1
type VI secretion system contractile sheath small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012426790.1
GO:0033104 - type VI protein secretion system complex [Evidence IEA]
type VI secretion system contractile sheath large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011883106.1
type VI secretion system tube protein Hcp
COORDINATES: similar to AA sequence:RefSeq:WP_017333649.1
type VI secretion system baseplate subunit TssE
COORDINATES: similar to AA sequence:RefSeq:WP_006484396.1
type VI secretion system baseplate subunit TssF
COORDINATES: similar to AA sequence:RefSeq:WP_009971111.1
type VI secretion system baseplate subunit TssG
COORDINATES: similar to AA sequence:RefSeq:WP_009967199.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009967198.1
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: similar to AA sequence:RefSeq:WP_013343181.1
COORDINATES: similar to AA sequence:RefSeq:WP_012734488.1
type VI secretion system-associated protein TagF
COORDINATES: similar to AA sequence:RefSeq:WP_007176952.1
type VI secretion system membrane subunit TssM
COORDINATES: similar to AA sequence:RefSeq:WP_017452614.1
COORDINATES: similar to AA sequence:RefSeq:WP_009241798.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350774.1
COORDINATES: similar to AA sequence:RefSeq:WP_014899400.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012216989.1
COORDINATES: similar to AA sequence:RefSeq:WP_012733937.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405074.1
FMN-binding negative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007583923.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690375.1
phosphate-starvation-inducible PsiE family protein
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_017454087.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006494747.1
COORDINATES: similar to AA sequence:RefSeq:WP_009973227.1
COORDINATES: similar to AA sequence:RefSeq:WP_013338580.1
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007744296.1
COORDINATES: similar to AA sequence:RefSeq:WP_008920041.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067836.1
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_017452339.1
oxygen-insensitive NAD(P)H nitroreductase
COORDINATES: similar to AA sequence:RefSeq:WP_017449968.1
COORDINATES: similar to AA sequence:RefSeq:WP_013591935.1
YMGG-like glycine zipper-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018423807.1
COORDINATES: similar to AA sequence:RefSeq:WP_007176805.1
COORDINATES: similar to AA sequence:RefSeq:WP_006462422.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423810.1
COORDINATES: similar to AA sequence:RefSeq:WP_016355205.1
GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013341512.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
nicotinamide-nucleotide amidohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011349906.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014971793.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: similar to AA sequence:RefSeq:WP_007586697.1
COORDINATES: similar to AA sequence:RefSeq:WP_012352830.1
COORDINATES: similar to AA sequence:RefSeq:WP_013689893.1
COORDINATES: similar to AA sequence:RefSeq:WP_008350752.1
sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013342752.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014972151.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0019632 - shikimate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014972150.1
COORDINATES: similar to AA sequence:RefSeq:WP_006052717.1
COORDINATES: similar to AA sequence:RefSeq:WP_004552066.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690979.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011548227.1
COORDINATES: similar to AA sequence:RefSeq:WP_009240164.1
COORDINATES: similar to AA sequence:RefSeq:WP_003103736.1
COORDINATES: similar to AA sequence:RefSeq:WP_013210751.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_012434875.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018433192.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177038.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_006050322.1
COORDINATES: similar to AA sequence:RefSeq:WP_006480580.1
COORDINATES: similar to AA sequence:RefSeq:WP_006415781.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691652.1
COORDINATES: similar to AA sequence:RefSeq:WP_006399633.1
COORDINATES: similar to AA sequence:RefSeq:WP_004193627.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347976.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093046.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493186.1
sulfonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017332441.1
COORDINATES: similar to AA sequence:RefSeq:WP_010814484.1
COORDINATES: similar to AA sequence:RefSeq:WP_008349137.1
COORDINATES: similar to AA sequence:RefSeq:WP_006762174.1
COORDINATES: similar to AA sequence:RefSeq:WP_013590573.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093738.1
COORDINATES: similar to AA sequence:RefSeq:WP_004529095.1
COORDINATES: similar to AA sequence:RefSeq:WP_007737572.1
COORDINATES: similar to AA sequence:RefSeq:WP_012249850.1
COORDINATES: similar to AA sequence:RefSeq:WP_006765443.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177391.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588021.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF008425.0
GO:0050131 - N-methyl-L-amino-acid oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012405010.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579368.1
N-acyl homoserine lactonase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012405017.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579372.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579373.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732618.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177745.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051581.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579377.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017773588.1
COORDINATES: similar to AA sequence:RefSeq:WP_012248582.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405026.1
COORDINATES: similar to AA sequence:RefSeq:WP_017773591.1
COORDINATES: similar to AA sequence:RefSeq:WP_006220873.1
COORDINATES: similar to AA sequence:RefSeq:WP_010089755.1
COORDINATES: similar to AA sequence:RefSeq:WP_017774727.1
COORDINATES: similar to AA sequence:RefSeq:WP_018444043.1
COORDINATES: similar to AA sequence:RefSeq:WP_018443317.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049832.1
COORDINATES: similar to AA sequence:RefSeq:WP_009239906.1
COORDINATES: similar to AA sequence:RefSeq:WP_008353290.1
COORDINATES: similar to AA sequence:RefSeq:WP_018433217.1
GO:0008726 - alkanesulfonate monooxygenase activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
FMNH2-dependent alkanesulfonate monooxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_012404868.1
COORDINATES: similar to AA sequence:RefSeq:WP_017329110.1
type II toxin-antitoxin system HipA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012428984.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092540.1
COORDINATES: similar to AA sequence:RefSeq:WP_011879992.1
COORDINATES: similar to AA sequence:RefSeq:WP_014898861.1
trimeric intracellular cation channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006756341.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341518.1
glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013690156.1
COORDINATES: protein motif:HMM:NF012575.2
COORDINATES: similar to AA sequence:RefSeq:WP_020656692.1
COORDINATES: similar to AA sequence:RefSeq:WP_014973055.1
COORDINATES: similar to AA sequence:RefSeq:WP_020066431.1
COORDINATES: similar to AA sequence:RefSeq:WP_019922472.1
COORDINATES: similar to AA sequence:RefSeq:WP_018435862.1
COORDINATES: protein motif:HMM:NF014664.2
COORDINATES: similar to AA sequence:RefSeq:WP_018008188.1
COORDINATES: similar to AA sequence:RefSeq:WP_014190165.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
5-demethoxyubiquinol-8 5-hydroxylase UbiM
COORDINATES: similar to AA sequence:RefSeq:WP_014725753.1
COORDINATES: similar to AA sequence:RefSeq:WP_007576580.1
COORDINATES: similar to AA sequence:RefSeq:WP_012218417.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432275.1
COORDINATES: similar to AA sequence:RefSeq:WP_006475949.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006495788.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049560.1
protein-L-isoaspartate O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017329567.1
COORDINATES: similar to AA sequence:RefSeq:WP_013689322.1
COORDINATES: similar to AA sequence:RefSeq:WP_014230117.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178032.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347157.1
COORDINATES: similar to AA sequence:RefSeq:WP_012733220.1
COORDINATES: similar to AA sequence:RefSeq:WP_012733221.1
COORDINATES: similar to AA sequence:RefSeq:WP_011547805.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488273.1
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012432868.1
GO:0045027 - DNA end binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018437318.1
COORDINATES: similar to AA sequence:RefSeq:WP_006410221.1
COORDINATES: similar to AA sequence:RefSeq:WP_013090667.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690147.1
COORDINATES: similar to AA sequence:RefSeq:WP_011659161.1
COORDINATES: similar to AA sequence:RefSeq:WP_006755874.1
COORDINATES: similar to AA sequence:RefSeq:WP_006480912.1
COORDINATES: similar to AA sequence:RefSeq:WP_006480911.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690142.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583813.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770901.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372326.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016347709.1
COORDINATES: similar to AA sequence:RefSeq:WP_019574074.1
COORDINATES: similar to AA sequence:RefSeq:WP_015602268.1
COORDINATES: similar to AA sequence:RefSeq:WP_010098057.1
COORDINATES: similar to AA sequence:RefSeq:WP_006488701.1
COORDINATES: similar to AA sequence:RefSeq:WP_013802681.1
COORDINATES: similar to AA sequence:RefSeq:WP_002553320.1
COORDINATES: similar to AA sequence:RefSeq:WP_011351672.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490840.1
COORDINATES: similar to AA sequence:RefSeq:WP_017329796.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006477884.1
COORDINATES: similar to AA sequence:RefSeq:WP_018442236.1
COORDINATES: similar to AA sequence:RefSeq:WP_011657860.1
COORDINATES: similar to AA sequence:RefSeq:WP_014007120.1
COORDINATES: similar to AA sequence:RefSeq:WP_008921897.1
COORDINATES: similar to AA sequence:RefSeq:WP_003262721.1
COORDINATES: protein motif:HMM:NF015506.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008920656.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423515.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008920658.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497138.1
COORDINATES: similar to AA sequence:RefSeq:WP_006478160.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006481264.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372571.1
COORDINATES: similar to AA sequence:RefSeq:WP_013342606.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336911.1
COORDINATES: similar to AA sequence:RefSeq:WP_014973480.1
COORDINATES: similar to AA sequence:RefSeq:WP_015865742.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732304.1
COORDINATES: similar to AA sequence:RefSeq:WP_012328289.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013093752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004521493.1
COORDINATES: similar to AA sequence:RefSeq:WP_008348794.1
COORDINATES: similar to AA sequence:RefSeq:WP_004521491.1
COORDINATES: similar to AA sequence:RefSeq:WP_004527026.1
COORDINATES: similar to AA sequence:RefSeq:WP_004521489.1
COORDINATES: similar to AA sequence:RefSeq:WP_009973414.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427003.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012427006.1
COORDINATES: similar to AA sequence:RefSeq:WP_012733222.1
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014725045.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI
COORDINATES: similar to AA sequence:RefSeq:WP_007181785.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
hopanoid biosynthesis associated radical SAM protein HpnJ
COORDINATES: similar to AA sequence:RefSeq:WP_019939278.1
COORDINATES: similar to AA sequence:RefSeq:WP_012426704.1
COORDINATES: similar to AA sequence:RefSeq:WP_011351132.1
iron ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014897907.1
GO:0020037 - heme binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0033212 - iron import into cell [Evidence IEA]
iron uptake transporter deferrochelatase/peroxidase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011491481.1
COORDINATES: similar to AA sequence:RefSeq:WP_006027362.1
COORDINATES: similar to AA sequence:RefSeq:WP_001572368.1
COORDINATES: similar to AA sequence:RefSeq:WP_013591722.1
COORDINATES: similar to AA sequence:RefSeq:WP_008922064.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433191.1
COORDINATES: similar to AA sequence:RefSeq:WP_008922066.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003112650.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF024140.2
Tar ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006388519.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481457.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049851.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_007576706.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740832.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771470.1
COORDINATES: similar to AA sequence:RefSeq:WP_015877469.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427129.1
COORDINATES: similar to AA sequence:RefSeq:WP_003102236.1
COORDINATES: similar to AA sequence:RefSeq:WP_018434623.1
COORDINATES: similar to AA sequence:RefSeq:WP_007181867.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491517.1
COORDINATES: similar to AA sequence:RefSeq:WP_006767097.1
COORDINATES: similar to AA sequence:RefSeq:WP_018441750.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583198.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217658.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217657.1
COORDINATES: similar to AA sequence:RefSeq:WP_006397042.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050356.1
COORDINATES: similar to AA sequence:RefSeq:WP_011356153.1
COORDINATES: similar to AA sequence:RefSeq:WP_011356154.1
COORDINATES: similar to AA sequence:RefSeq:WP_011004508.1
PAS domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_004631563.1
COORDINATES: similar to AA sequence:RefSeq:WP_014251003.1
COORDINATES: similar to AA sequence:RefSeq:WP_018434484.1
COORDINATES: similar to AA sequence:RefSeq:WP_018434485.1
COORDINATES: similar to AA sequence:RefSeq:WP_006407851.1
GO:0018576 - catechol 1,2-dioxygenase activity [Evidence IEA]
GO:0019615 - catechol catabolic process, ortho-cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013341338.1
GO:0016159 - muconolactone delta-isomerase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006413726.1
GO:0018850 - chloromuconate cycloisomerase activity [Evidence IEA]; GO:0018849 - muconate cycloisomerase activity [Evidence IEA]
muconate/chloromuconate family cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_008326689.1
COORDINATES: similar to AA sequence:RefSeq:WP_019577431.1
voltage-gated chloride channel family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014191438.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490338.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006047299.1
4-hydroxyphenylacetate 3-monooxygenase, reductase component
COORDINATES: similar to AA sequence:RefSeq:WP_006047300.1
ethyl tert-butyl ether degradation protein EthD
COORDINATES: similar to AA sequence:RefSeq:WP_012427951.1
COORDINATES: similar to AA sequence:RefSeq:WP_013394524.1
COORDINATES: similar to AA sequence:RefSeq:WP_013743790.1
COORDINATES: similar to AA sequence:RefSeq:WP_019572555.1
COORDINATES: protein motif:HMM:NF014653.2
COORDINATES: similar to AA sequence:RefSeq:WP_003805331.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018913324.1
purine-cytosine permease-like transporter
COORDINATES: similar to AA sequence:RefSeq:WP_011351539.1
COORDINATES: similar to AA sequence:RefSeq:WP_015040523.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341341.1
COORDINATES: protein motif:HMM:NF024966.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_007580258.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: protein motif:HMM:NF013044.2
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013233358.1
COORDINATES: protein motif:HMM:NF012402.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025178.2
COORDINATES: similar to AA sequence:RefSeq:WP_017776812.1
COORDINATES: similar to AA sequence:RefSeq:WP_017776811.1
COORDINATES: similar to AA sequence:RefSeq:WP_011301539.1
COORDINATES: similar to AA sequence:RefSeq:WP_008917380.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769769.1
COORDINATES: similar to AA sequence:RefSeq:WP_006462758.1
GO:0008800 - beta-lactamase activity [Evidence IEA]
GO:0030655 - beta-lactam antibiotic catabolic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006478526.1
COORDINATES: similar to AA sequence:RefSeq:WP_017455544.1
COORDINATES: protein motif:HMM:NF019430.2
GO:0042597 - periplasmic space [Evidence IEA]
Spy/CpxP family protein refolding chaperone
COORDINATES: protein motif:HMM:NF016818.2
COORDINATES: similar to AA sequence:RefSeq:WP_013690643.1
COORDINATES: similar to AA sequence:RefSeq:WP_011402469.1
COORDINATES: similar to AA sequence:RefSeq:WP_020201107.1
COORDINATES: protein motif:HMM:NF019016.2
COORDINATES: similar to AA sequence:RefSeq:WP_011356167.1
COORDINATES: similar to AA sequence:RefSeq:WP_012403888.1
COORDINATES: similar to AA sequence:RefSeq:WP_013342584.1
COORDINATES: similar to AA sequence:RefSeq:WP_012371928.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405359.1
COORDINATES: similar to AA sequence:RefSeq:WP_020201817.1
COORDINATES: similar to AA sequence:RefSeq:WP_008346734.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423979.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008345892.1
COORDINATES: similar to AA sequence:RefSeq:WP_012735135.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092802.1
COORDINATES: similar to AA sequence:RefSeq:WP_015875797.1
COORDINATES: protein motif:HMM:TIGR01841.1
Members of this family are phasins (small proteins associated with inclusions such as PHA granules). Note that several different families of phasins have been named PhaP despite very little sequence similarity to each other; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013698026.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008343296.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876266.1
COORDINATES: similar to AA sequence:RefSeq:WP_014973409.1
COORDINATES: similar to AA sequence:RefSeq:WP_001061575.1
COORDINATES: similar to AA sequence:RefSeq:WP_010108262.1
COORDINATES: similar to AA sequence:RefSeq:WP_012366557.1
COORDINATES: similar to AA sequence:RefSeq:WP_006405363.1
ring-hydroxylating oxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012218348.1
COORDINATES: similar to AA sequence:RefSeq:WP_006405366.1
COORDINATES: similar to AA sequence:RefSeq:WP_006416951.1
COORDINATES: similar to AA sequence:RefSeq:WP_012218351.1
COORDINATES: similar to AA sequence:RefSeq:WP_015003048.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193907.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343454.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193909.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]
GO:0006562 - proline catabolic process [Evidence IEA]
L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014725605.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_011812365.1
COORDINATES: similar to AA sequence:RefSeq:WP_006406810.1
COORDINATES: protein motif:HMM:NF017747.2
COORDINATES: similar to AA sequence:RefSeq:WP_006218219.1
COORDINATES: similar to AA sequence:RefSeq:WP_006225134.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343463.1
GO:0050129 - N-formylglutamate deformylase activity [Evidence IEA]
GO:0019557 - histidine catabolic process to glutamate and formate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013343462.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343461.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343460.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343459.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343458.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343457.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343456.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014253308.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253255.1
COORDINATES: similar to AA sequence:RefSeq:WP_007176707.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404792.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006481895.1
COORDINATES: similar to AA sequence:RefSeq:WP_007584238.1
COORDINATES: similar to AA sequence:RefSeq:WP_007748872.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013952069.1
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:TIGR01845.1
COORDINATES: similar to AA sequence:RefSeq:WP_007856717.1
COORDINATES: similar to AA sequence:RefSeq:WP_016450742.1
COORDINATES: similar to AA sequence:RefSeq:WP_012328264.1
COORDINATES: protein motif:HMM:TIGR01783.1
COORDINATES: similar to AA sequence:RefSeq:WP_006392619.1
COORDINATES: similar to AA sequence:RefSeq:WP_017329953.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404587.1
COORDINATES: similar to AA sequence:RefSeq:WP_013542238.1
COORDINATES: similar to AA sequence:RefSeq:WP_013542237.1
COORDINATES: protein motif:HMM:TIGR02601.1
COORDINATES: similar to AA sequence:RefSeq:WP_004198495.1
autotransporter-associated beta strand repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014972448.1
dicarboxylate transporter/tellurite-resistance protein TehA
COORDINATES: similar to AA sequence:RefSeq:WP_017335319.1
COORDINATES: similar to AA sequence:RefSeq:WP_011881299.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018425058.1
COORDINATES: similar to AA sequence:RefSeq:WP_007733114.1
COORDINATES: similar to AA sequence:RefSeq:WP_007589753.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0042301 - phosphate ion binding [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: similar to AA sequence:RefSeq:WP_011661002.1
COORDINATES: similar to AA sequence:RefSeq:WP_014725636.1
COORDINATES: similar to AA sequence:RefSeq:WP_003053678.1
COORDINATES: similar to AA sequence:RefSeq:WP_003053679.1
COORDINATES: similar to AA sequence:RefSeq:WP_017525394.1
COORDINATES: similar to AA sequence:RefSeq:WP_007876676.1
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: similar to AA sequence:RefSeq:WP_017331256.1
COORDINATES: similar to AA sequence:RefSeq:WP_008917270.1
COORDINATES: similar to AA sequence:RefSeq:WP_017331125.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880989.1
COORDINATES: similar to AA sequence:RefSeq:WP_011546772.1
COORDINATES: similar to AA sequence:RefSeq:WP_006762946.1
GO:0008851 - ethanolamine ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004524485.1
COORDINATES: similar to AA sequence:RefSeq:WP_004195858.1
GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008347625.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350236.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490391.1
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013691010.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490393.1
COORDINATES: similar to AA sequence:RefSeq:WP_011400937.1
COORDINATES: similar to AA sequence:RefSeq:WP_010114377.1
COORDINATES: similar to AA sequence:RefSeq:WP_006414551.1
COORDINATES: similar to AA sequence:RefSeq:WP_009908615.1
COORDINATES: similar to AA sequence:RefSeq:WP_006484009.1
COORDINATES: similar to AA sequence:RefSeq:WP_018437200.1
COORDINATES: similar to AA sequence:RefSeq:WP_013590164.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013691212.1
COORDINATES: similar to AA sequence:RefSeq:WP_007731113.1
COORDINATES: similar to AA sequence:RefSeq:WP_012432317.1
COORDINATES: similar to AA sequence:RefSeq:WP_018059862.1
COORDINATES: similar to AA sequence:RefSeq:WP_012403499.1
COORDINATES: similar to AA sequence:RefSeq:WP_020068076.1
COORDINATES: similar to AA sequence:RefSeq:WP_006761502.1
COORDINATES: similar to AA sequence:RefSeq:WP_009520076.1
GO:0047443 - 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity [Evidence IEA]
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_006399197.1
COORDINATES: similar to AA sequence:RefSeq:WP_014897830.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006396498.1
COORDINATES: similar to AA sequence:RefSeq:WP_014722606.1
COORDINATES: similar to AA sequence:RefSeq:WP_008642530.1
COORDINATES: similar to AA sequence:RefSeq:WP_008642524.1
COORDINATES: similar to AA sequence:RefSeq:WP_017423657.1
COORDINATES: similar to AA sequence:RefSeq:WP_020066821.1
COORDINATES: similar to AA sequence:RefSeq:WP_007860577.1
4-oxalocrotonate tautomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013697819.1
COORDINATES: similar to AA sequence:RefSeq:WP_013697817.1
COORDINATES: similar to AA sequence:RefSeq:WP_004528234.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016344139.1
COORDINATES: similar to AA sequence:RefSeq:WP_013698133.1
COORDINATES: similar to AA sequence:RefSeq:WP_006024176.1
COORDINATES: similar to AA sequence:RefSeq:WP_015875794.1
COORDINATES: similar to AA sequence:RefSeq:WP_012401731.1
COORDINATES: similar to AA sequence:RefSeq:WP_015875792.1
COORDINATES: similar to AA sequence:RefSeq:WP_013689457.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_014972143.1
COORDINATES: similar to AA sequence:RefSeq:WP_017777504.1
COORDINATES: similar to AA sequence:RefSeq:WP_018314448.1
COORDINATES: similar to AA sequence:RefSeq:WP_017777502.1
COORDINATES: similar to AA sequence:RefSeq:WP_012464963.1
COORDINATES: similar to AA sequence:RefSeq:WP_006761478.1
COORDINATES: similar to AA sequence:RefSeq:WP_006496810.1
COORDINATES: similar to AA sequence:RefSeq:WP_006750183.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492355.1
COORDINATES: similar to AA sequence:RefSeq:WP_008343351.1
COORDINATES: similar to AA sequence:RefSeq:WP_017449930.1
COORDINATES: similar to AA sequence:RefSeq:WP_018424166.1
COORDINATES: similar to AA sequence:RefSeq:WP_013590418.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423815.1