Vagococcus xieshaowenii strain CF-49 plasmid punnamed1, complete sequence.
type: Entry
definition: Vagococcus xieshaowenii strain CF-49 plasmid punnamed1, complete sequence.
sequence version: NZ_CP038866.1
sequence date: 2023-05-01
sequence: sequence
division: CON
label: NZ_CP038866.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN11283524
keyword: RefSeq
source: Vagococcus xieshaowenii
organism: Vagococcus xieshaowenii
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Vagococcus.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP038866.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1000.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/01/2023 02:54:06\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,027\nCDSs (total) :: 1,943\nGenes (coding) :: 1,912\nCDSs (with protein) :: 1,912\nGenes (RNA) :: 84\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 58\nncRNAs :: 4\nPseudo Genes (total) :: 31\nCDSs (without protein) :: 31\nPseudo Genes (ambiguous residues) :: 0 of 31\nPseudo Genes (frameshifted) :: 20 of 31\nPseudo Genes (incomplete) :: 12 of 31\nPseudo Genes (internal stop) :: 3 of 31\nPseudo Genes (multiple problems) :: 4 of 31\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 27416
topology: circular
so has quality: SO_0000988
location: 1..27416
location: region:1-27416:1
RO_0002162: 2562451

NZ_CP038866
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN11283524
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Ge, Y.
journal: Submitted (05-APR-2019) State Key Laboratory of Infection Disease Prevention and Control, Chinese Center for Disease Control and Prevention, 155 Changbai Road, Beijing, Beijing 102206, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27416:1
position: 27416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27416:1:source
so part of: sequence
organism: Vagococcus xieshaowenii
mol type: genomic DNA
strain: CF-49
plasmid: punnamed1
country: China: Tibet Plateau,Qinghai
collection date: 2017-07-07

2562451
type: Taxonomy
SIO_000068: taxonomy

E4Z98_RS10175
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10175
so part of: sequence
location: join(27275..27416,1..53)
location: region:1-27416:1
so has part: feature:27275-27416:1:exon
so has part: feature:1-53:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:27275-27416:1:exon

position:27275:1
position: 27275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-53:1:exon

position:53:1
position: 53
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

E4Z98_RS10175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIFHLSMTIAKREGGKRSLIAMAAYRSGEKLYSELYEKTNLYNHRTVKPEAFILKLIMFLMNF
SIO_010081: E4Z98_RS10175
subclass of: SO_0000673
so part of: E4Z98_RS10175
location: join(27275..27416,1..53)
location: region:1-27416:1
so has part: feature:27275-27416:1:exon
so has part: feature:1-53:1:exon

WP_241856786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27275-27416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-53:1:exon

E4Z98_RS10180
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10180
so part of: sequence
location: 77..475
location: region:77-475:1
so has part: feature:77-475:1:exon
subclass of: SO_0000010

position:77:1
position: 77
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475:1
position: 475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77-475:1:exon

E4Z98_RS10180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MELAEKSPNAQLCRELNVALPIELNNSDQRMLIEDFVKDNFVSEGMIADVAIHRDDENNPHAHIMLTMREVDSEGNILNKRKRIPKLDENGNQIFNEKGQRVTVFQLKQMIGIENLLFPKFVKIGLIKSINI
SIO_010081: E4Z98_RS10180
subclass of: SO_0000673
so part of: E4Z98_RS10180
location: 77..475
location: region:77-475:1
so has part: feature:77-475:1:exon

WP_241856788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77-475:1:exon

E4Z98_RS10185
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10185
so part of: sequence
location: 887..1705
location: region:887-1705:1
so has part: feature:887-1705:1:exon
subclass of: SO_0000010

position:887:1
position: 887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705:1
position: 1705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887-1705:1:exon

E4Z98_RS10185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10185
inference: COORDINATES: protein motif:HMM:NF037293.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSKISSERDMLTKANEILDKQAERFFKKSYPSLNIDKFSNHEVRAMVNETIFRKQLLNKDQLAEVIYNERVVEKEESKKIFKEKPFQTSRYLDSKIKQVEDSITKENNPERKEILSIKKEKLIGIKQGLIEYVQSEVERKFDKNVSIDSVIEGEMLLAKADYYKTTDFSKVEGVARFSSEEINSMLEQSKGFLTNIQTVKIPNDCQGVFFVQDSMKHIDELSPLAKQNLKKVVNRNAYLPDSDKIELSKEIENTNKDQSKNWIRTYQKKMK
SIO_010081: E4Z98_RS10185
subclass of: SO_0000673
so part of: E4Z98_RS10185
location: 887..1705
location: region:887-1705:1
so has part: feature:887-1705:1:exon

WP_241856804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:887-1705:1:exon

E4Z98_RS10190
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10190
so part of: sequence
location: 1875..2075
location: region:1875-2075:1
so has part: feature:1875-2075:1:exon
subclass of: SO_0000010

position:1875:1
position: 1875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075:1
position: 2075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875-2075:1:exon

E4Z98_RS10190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFIKDTKFKLGSAVVALGTLFITDPVFAATDPQAKLVQAGNTIKRCFNSLNCCSWWDCLCEDCY
SIO_010081: E4Z98_RS10190
subclass of: SO_0000673
so part of: E4Z98_RS10190
location: 1875..2075
location: region:1875-2075:1
so has part: feature:1875-2075:1:exon

WP_241856790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1875-2075:1:exon

E4Z98_RS10195
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10195
so part of: sequence
location: 2071..2178
location: region:2071-2178:1
so has part: feature:2071-2178:1:exon
subclass of: SO_0000010

position:2071:1
position: 2071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2178:1
position: 2178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2071-2178:1:exon

E4Z98_RS10195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10195
inference: COORDINATES: protein motif:HMM:NF028253.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYLPSIDDPQEKNTMYKALGTALLVTALGGHWFG
SIO_010081: E4Z98_RS10195
subclass of: SO_0000673
so part of: E4Z98_RS10195
location: 2071..2178
location: region:2071-2178:1
so has part: feature:2071-2178:1:exon

WP_241856806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2071-2178:1:exon

E4Z98_RS10200
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10200
so part of: sequence
location: 2226..2384
location: region:2226-2384:1
so has part: feature:2226-2384:1:exon
subclass of: SO_0000010

position:2226:1
position: 2226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2384:1
position: 2384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2226-2384:1:exon

E4Z98_RS10200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSDQVKQALLDLLNADTEKGRTWFFPSNVSDRYTVILGLDLKQSAKAIERH
SIO_010081: E4Z98_RS10200
subclass of: SO_0000673
so part of: E4Z98_RS10200
location: 2226..2384
location: region:2226-2384:1
so has part: feature:2226-2384:1:exon

WP_241856792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2226-2384:1:exon

E4Z98_RS10205
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10205
so part of: sequence
location: 2684..2962
location: region:2684-2962:1
so has part: feature:2684-2962:1:exon
subclass of: SO_0000010

position:2684:1
position: 2684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962:1
position: 2962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2684-2962:1:exon

E4Z98_RS10205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEMIYWEDNSRFQGVFKDFFVVYQPDKKQFSLVSMLKVDGLNVDTLPVSEQEGLNEDFGVFLSQNVLYEPQITSKNVPVEIDDFVEAWVKQ
SIO_010081: E4Z98_RS10205
subclass of: SO_0000673
so part of: E4Z98_RS10205
location: 2684..2962
location: region:2684-2962:1
so has part: feature:2684-2962:1:exon

WP_241856794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2684-2962:1:exon

E4Z98_RS10210
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10210
so part of: sequence
location: 2947..3255
location: region:2947-3255:1
so has part: feature:2947-3255:1:exon
subclass of: SO_0000010

position:2947:1
position: 2947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3255:1
position: 3255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2947-3255:1:exon

E4Z98_RS10210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKTVENYRKMPGHNEALLQLKASYYYHYRNLASNMETSKKQHFVINSEPISKETYDSLELSYQVLRDKTRTIRTALIAFLSKYDCQVEICTIGEMKKVLNS
SIO_010081: E4Z98_RS10210
subclass of: SO_0000673
so part of: E4Z98_RS10210
location: 2947..3255
location: region:2947-3255:1
so has part: feature:2947-3255:1:exon

WP_241856796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2947-3255:1:exon

E4Z98_RS10215
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10215
so part of: sequence
location: 3266..3604
location: region:3266-3604:1
so has part: feature:3266-3604:1:exon
subclass of: SO_0000010

position:3266:1
position: 3266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3604:1
position: 3604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3266-3604:1:exon

E4Z98_RS10215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKIPKEKIIVIPEVDTDVVSDLAPFNFTVERDKLLIDDSYAVPYVITKYNNKPRGNWFNRIRKMSGDITISHYYTKANGNSLNDYYNRTIKNKQAEIDRSHDPLTIIRLET
SIO_010081: E4Z98_RS10215
subclass of: SO_0000673
so part of: E4Z98_RS10215
location: 3266..3604
location: region:3266-3604:1
so has part: feature:3266-3604:1:exon

WP_241856798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3266-3604:1:exon

E4Z98_RS10220
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10220
so part of: sequence
location: 3606..4049
location: region:3606-4049:1
so has part: feature:3606-4049:1:exon
subclass of: SO_0000010

position:3606:1
position: 3606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4049:1
position: 4049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3606-4049:1:exon

E4Z98_RS10220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10220
inference: COORDINATES: protein motif:HMM:NF015118.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIAQTQLEQAVDENTSYLYLYTYVLIKSKSEDKLKKLCEDFETRCIASGVKALIPYTMIDKAYWSSLPLQSNEVPEYTYTIANSISASSIFPFDDNELSVFTKNMIIEGINKDTENIVSIDYTNRKLVVNRNKFVFGLSGGERPLT
SIO_010081: E4Z98_RS10220
subclass of: SO_0000673
so part of: E4Z98_RS10220
location: 3606..4049
location: region:3606-4049:1
so has part: feature:3606-4049:1:exon

WP_241856800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3606-4049:1:exon

E4Z98_RS10225
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10225
so part of: sequence
location: 4187..5227
location: region:4187-5227:1
so has part: feature:4187-5227:1:exon
subclass of: SO_0000010

position:4187:1
position: 4187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5227:1
position: 5227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4187-5227:1:exon

E4Z98_RS10225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10225
inference: COORDINATES: protein motif:HMM:NF040179.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MSDVRINPFQIYSRNTLDVDLKESLSDFEEDELVENIEIKHKDYEMTDNDIDKEISKRMNILTPYFLMVDHSLTDSQLSIIKIEAKKCYTTLYEKKNLSKMENTDFPTFSDLENRLKALEETDPKRYKRIEDFIYSLEDFTIGSRTIFNGHTNIDLNNPLICFSLRDLQTEEGIRDLAYLNSFSYLFEEITNNPQIVTSVYADEFHFLLKNKISADFFFQAYKRFRKYNADCTVSTQQIDDVLKAPDNIGKAIIGNSFTKVFFGLDETEAQGISNELKLKLTKKELSFITSKRQGEALLFHGTKRAKIKVDLTQEEMRLLNPGEYEDIYGVSPKKEINWLLRSKIQ
SIO_010081: E4Z98_RS10225
subclass of: SO_0000673
so part of: E4Z98_RS10225
location: 4187..5227
location: region:4187-5227:1
so has part: feature:4187-5227:1:exon

WP_241856802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4187-5227:1:exon

E4Z98_RS09565
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09565
old locus tag: E4Z98_09565
so part of: sequence
location: 5241..6593
location: region:5241-6593:1
so has part: feature:5241-6593:1:exon
subclass of: SO_0000010

position:5241:1
position: 5241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6593:1
position: 6593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5241-6593:1:exon

E4Z98_RS09565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09565
old locus tag: E4Z98_09565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000875579.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYKILKNLQFYYQENVIVVQINEKYLTNREHIFDIEESEQYFVDVEEILTKDGKLEIVYHRPNGYTPLLDLKEYADFYKLDIVNRLLEMNVLEKTNTYLAMQNILLKDTRDLLFIYKADHFGNLPYSTKEELEQWKNFICSFFGKYTLEKYEKNRIEVLAKEKNSFLNDIEAVESLESLRDLIKNRLTEEQKNFFSTELQDKKADVRKIRRNKSLKIALVVGVIALYGGTVFLMKVNEKKQVTATQQSAETEITILNKIIDNDSENIEEDMQKLNYPKKKQVDIYVKLGDYTKAYELDKNSDKKIIQSLYKQGETEKIEALDLPGSDYLADFKKILAYDNSTDIEYLVQTSTDTTIIEALIDQAVKKKDIPTVKTIRQVSITQKKLAIDPKRQISMIDLLIENNSEELENMYKDNSLNEDLKKKQTNDLLEENNTLLSEKIELTNAEKD
SIO_010081: E4Z98_RS09565
subclass of: SO_0000673
so part of: E4Z98_RS09565
location: 5241..6593
location: region:5241-6593:1
so has part: feature:5241-6593:1:exon

WP_002301633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5241-6593:1:exon

E4Z98_RS09570
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09570
old locus tag: E4Z98_09570
so part of: sequence
location: 6615..7724
location: region:6615-7724:1
so has part: feature:6615-7724:1:exon
subclass of: SO_0000010

position:6615:1
position: 6615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7724:1
position: 7724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6615-7724:1:exon

E4Z98_RS09570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09570
old locus tag: E4Z98_09570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015543617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysozyme family protein
translation: MGATAAKLLIRYRKPIAKAILGFFVFIIVIFLLIFNNDQTAPSGGLATENKNLSESVLRYKSTVEKYARQYDGMEYVPYILALMQIESGGEGGDPMQSSESLGLPPNTIKDPERSIQRGVEFFVENMKSAINRGSDIKTALQAYNYGGGFVDFVVKNGGTYSFELAKQFSINLSGGEKVPYVNALSTSMGYNYRYNYGNMFYVPKLLEYVNESQASAEGVQNNSNNTGVVQVDVPSEYKNKLRYPRYDGHNYNTSGSYPFGQCTWYAFNRMAQIGKPVDDFMGNGGEWGYKGKALGYKVTNKPKVGTAISFPPGSFGSDPVYGHVAFVEVVNADGTLLVSECNVVNPGSGTISYRVVPASIANIASYVE
SIO_010081: E4Z98_RS09570
subclass of: SO_0000673
so part of: E4Z98_RS09570
location: 6615..7724
location: region:6615-7724:1
so has part: feature:6615-7724:1:exon

WP_002301635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6615-7724:1:exon

E4Z98_RS09575
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09575
old locus tag: E4Z98_09575
so part of: sequence
location: 7737..8288
location: region:7737-8288:1
so has part: feature:7737-8288:1:exon
subclass of: SO_0000010

position:7737:1
position: 7737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8288:1
position: 8288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7737-8288:1:exon

E4Z98_RS09575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09575
old locus tag: E4Z98_09575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010782370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEFDKIKVSLFISTLVLLVVTIGMIVFGIKQGEQIRHLKSDLKSVQTELADKQAEQNTNQSESEKIIKEFYKTVYNYEKSQKEISMTTVKELATDNVYQELQNEINVNNSYSPQQNTIQKSSVNENEIKILAYASKDNSQQYLVTAPIHQVFNGTKNDFEINQIIQIKNQQITQRTTIQLGEE
SIO_010081: E4Z98_RS09575
subclass of: SO_0000673
so part of: E4Z98_RS09575
location: 7737..8288
location: region:7737-8288:1
so has part: feature:7737-8288:1:exon

WP_002301636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7737-8288:1:exon

E4Z98_RS09580
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09580
old locus tag: E4Z98_09580
so part of: sequence
location: 8293..8724
location: region:8293-8724:1
so has part: feature:8293-8724:1:exon
subclass of: SO_0000010

position:8293:1
position: 8293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8724:1
position: 8724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8293-8724:1:exon

E4Z98_RS09580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09580
old locus tag: E4Z98_09580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001085135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKKKQEQVKLIILVILYLLLLPVTLIVFKLLPFIIANDTNIELSTFVTTILKHPINTFLEIIQSTYMIPFFIVQIIVLIILFVFLHPTKRQPFEVVGKTNPVHGSAYWGEESEINAPKNVHLIPEKSMKKILEKSMRRGKNE
SIO_010081: E4Z98_RS09580
subclass of: SO_0000673
so part of: E4Z98_RS09580
location: 8293..8724
location: region:8293-8724:1
so has part: feature:8293-8724:1:exon

WP_002301637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8293-8724:1:exon

E4Z98_RS10270
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10270
so part of: sequence
location: 8717..9436
location: region:8717-9436:1
so has part: feature:8717-9436:1:exon
subclass of: SO_0000010

position:8717:1
position: 8717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9436:1
position: 9436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8717-9436:1:exon

E4Z98_RS10270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10270
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MSSLLAESDGLILGKFQSGNVVIQPEDSKISNRNIFVVGGPGSFKTQSYVLPNVVNNRSTSIVVTDPKGEIYELTNEIKKAQGFKTVVINFKDFLLSSRYNPLLYIRKSNDTNKIANVIVSAKNDPKRKDFWFNAQLNLLNTLIKYVYFEYEPSARTIEGILDFLEEFDPRYNEEGVSELDEQFERLPDGHEAKRSYYLGFRQAQSEARPNIVISLLTTLQDFVDKEVSEFTSTNDFFL
SIO_010081: E4Z98_RS10270
subclass of: SO_0000673
so part of: E4Z98_RS10270
location: 8717..9436
location: region:8717-9436:1
so has part: feature:8717-9436:1:exon

WP_280953138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8717-9436:1:exon

E4Z98_RS10275
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10275
so part of: sequence
location: 9468..10373
location: region:9468-10373:1
so has part: feature:9468-10373:1:exon
subclass of: SO_0000010

position:9468:1
position: 9468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10373:1
position: 10373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9468-10373:1:exon

E4Z98_RS10275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10275
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MLISPLDRTWDGLVNLFFQQMFTELYFLGDKHNAKLPVPLVMLLDEFVNLGYFPTYENFLATCRGYRISVSTILQSLPQGFELYGDKKFKAIIGNHAIKICLGGVEETTAEYFSRQVNDTTIKVYTGGTSESKTSAKTTNRSGSKSESYGYQKRRLITEGEVINLQQEENGRKSIVLIDGKPYMLRKTPQFELFGNLLKKHEISQQDYISSQTEFAKETIEELEKQHKQRKVQLASAPIFHEKKQEDDLNKKEINLPEQPIESEVTEEEEEKELLMSDILSSFDEGIEENTTNNDNSELPF
SIO_010081: E4Z98_RS10275
subclass of: SO_0000673
so part of: E4Z98_RS10275
location: 9468..10373
location: region:9468-10373:1
so has part: feature:9468-10373:1:exon

WP_280953140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9468-10373:1:exon

E4Z98_RS09590
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09590
old locus tag: E4Z98_09590
so part of: sequence
location: 10391..11314
location: region:10391-11314:1
so has part: feature:10391-11314:1:exon
subclass of: SO_0000010

position:10391:1
position: 10391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11314:1
position: 11314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10391-11314:1:exon

E4Z98_RS09590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09590
old locus tag: E4Z98_09590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010750198.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGLKEFFGNIPMFQKQVEREIEEKGIEPSEGIKKMEFSRQVIRNLVIGVLVVGILAFVGISYFNNKNQPPVTPTATTASKESNQSETSGEATENSSQAVQGSSDHLLKLSAKERADEATEAFESWYTSFSNGDVILEINKELLKEGSGGTSPIELQTKLIDNLKAKFGDKVSDDFYTGLQASFNFNPVIVDGTKGLTISKQNDDKSQWLRTWFLDTQKTEKNTKIVLRNDFPYEWADWRNKGQHDEKVGSMFSQIDWDNDLRYEVIGLVTSKQEKNIENIGGVFVVMQYNEKIGKWQVSGTIGGVM
SIO_010081: E4Z98_RS09590
subclass of: SO_0000673
so part of: E4Z98_RS09590
location: 10391..11314
location: region:10391-11314:1
so has part: feature:10391-11314:1:exon

WP_032495463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10391-11314:1:exon

E4Z98_RS09595
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09595
old locus tag: E4Z98_09595
so part of: sequence
location: 11316..12248
location: region:11316-12248:1
so has part: feature:11316-12248:1:exon
subclass of: SO_0000010

position:11316:1
position: 11316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12248:1
position: 12248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11316-12248:1:exon

E4Z98_RS09595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09595
old locus tag: E4Z98_09595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002339803.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDVIDQIKDTGSDILSSAGEAISNVFEGVKESVDSVLHPIDTLLGNWGSDLLEASMKIANKTTFDIPNIELISTITNVFVFATTTFAICIVLYKVIEAQIQASNGSGDALTANIVQKLFYSSIALATLPWAMNFFIKKIVAPIGEYVIQQVANDLNVETIGERLRNFLVSNFFNGGVSAVVLFVFVIFFAFSIAKYFVAICVFYADFLVLTMLTPLVALSLLTDEQNYFQIWIKELLSEALTMLIKLILYLAMITLMIAEKYTLPNFMLMVGCGLLIIKTPSALQNMWYSTKVSKGGGLGNLAMMAMFRK
SIO_010081: E4Z98_RS09595
subclass of: SO_0000673
so part of: E4Z98_RS09595
location: 11316..12248
location: region:11316-12248:1
so has part: feature:11316-12248:1:exon

WP_011266105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11316-12248:1:exon

E4Z98_RS09600
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09600
old locus tag: E4Z98_09600
so part of: sequence
location: 12266..13234
location: region:12266-13234:1
so has part: feature:12266-13234:1:exon
subclass of: SO_0000010

position:12266:1
position: 12266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13234:1
position: 13234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12266-13234:1:exon

E4Z98_RS09600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09600
old locus tag: E4Z98_09600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002339802.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYYFEIRIILPEEENQFLNRKLSKSELSEVTHYLQQKTSRGIPVKFRVGIFRVEDQTKIMSVTLNTKNTKETDVINLLLNRVTDQHVLVYLNEPTEPTLNTQELNRQELKTSNERQEIPQTEIPTETVNEPSVIKEISKKNQAKQTNSRKESLSESITKKNVPKIHLFISILTLFIVLLIGISVIQQVQLQSVKKESELLKEQIERVKETDISQSKIDTFGRYFLTYYFSQEKNQENYQSSLKTYVSEKVDISDWKALGKTLKSVNYYGSEQTKKGYSVEYLLNVTVEDRSKMQKITFEVEPTKNGFLVTTQPKLTDFSFN
SIO_010081: E4Z98_RS09600
subclass of: SO_0000673
so part of: E4Z98_RS09600
location: 12266..13234
location: region:12266-13234:1
so has part: feature:12266-13234:1:exon

WP_101152102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12266-13234:1:exon

E4Z98_RS09605
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09605
old locus tag: E4Z98_09605
so part of: sequence
location: 13263..13631
location: region:13263-13631:1
so has part: feature:13263-13631:1:exon
subclass of: SO_0000010

position:13263:1
position: 13263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13631:1
position: 13631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13263-13631:1:exon

E4Z98_RS09605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09605
old locus tag: E4Z98_09605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010782365.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKINLNQIYTAKEMSERIGKNRNYLSQAYRNNKHEILKNFNYRKIGGTIIFSDNPNNDLSQLITAKEASQLLGKNDEYFAHIYKRFPHRLEGIDHIYTGKTLFLTKESLEVFKKKMNKNVR
SIO_010081: E4Z98_RS09605
subclass of: SO_0000673
so part of: E4Z98_RS09605
location: 13263..13631
location: region:13263-13631:1
so has part: feature:13263-13631:1:exon

WP_000516429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13263-13631:1:exon

E4Z98_RS10140
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10140
old locus tag: E4Z98_09610
pseudo: true
so part of: sequence
location: 13691..14520
location: region:13691-14520:1
so has part: feature:13691-14520:1:exon
subclass of: SO_0000010

position:13691:1
position: 13691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14520:1
position: 14520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13691-14520:1:exon

E4Z98_RS10140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10140
old locus tag: E4Z98_09610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015543624.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LPXTG cell wall anchor domain-containing protein
SIO_010081: E4Z98_RS10140
subclass of: SO_0000673
so part of: E4Z98_RS10140
location: 13691..14520
location: region:13691-14520:1
so has part: feature:13691-14520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13691-14520:1:exon

E4Z98_RS09615
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09615
old locus tag: E4Z98_09615
so part of: sequence
location: 14837..15109
location: region:14837-15109:1
so has part: feature:14837-15109:1:exon
subclass of: SO_0000010

position:14837:1
position: 14837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15109:1
position: 15109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14837-15109:1:exon

E4Z98_RS09615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09615
old locus tag: E4Z98_09615
function: plasmid copy number control
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002325780.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MELAFRESLKKMRGTKSKEKFSQELEMSRSNYSRIESGKSDPTIKTLEQIAKLTNSTLVVDLIPNEPTEPESEQVTLDLEMEEEKSNDFV
SIO_010081: E4Z98_RS09615
subclass of: SO_0000673
so part of: E4Z98_RS09615
location: 14837..15109
location: region:14837-15109:1
so has part: feature:14837-15109:1:exon

WP_011266100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14837-15109:1:exon

E4Z98_RS09620
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09620
old locus tag: E4Z98_09620
so part of: sequence
location: 15493..16983
location: region:15493-16983:1
so has part: feature:15493-16983:1:exon
subclass of: SO_0000010

position:15493:1
position: 15493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16983:1
position: 16983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15493-16983:1:exon

E4Z98_RS09620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09620
old locus tag: E4Z98_09620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015543625.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primase C-terminal domain-containing protein
translation: MNIPFVVETVLHDGLLKYKFKNSKIRSITTKPGKSKGAIFAYRSKKSMIGGRGVVLTSEEAIHENQDTFTHWTPNVYRYGTYADENRSYTKGHSENNLRQINTFFIDFDIHTEKETISASDILTTAIDLGFMPTLIIKSDKGYQAYFVLETPVYVTSKSEFKSVKAAKIISQNIREYFGKSLPVDLTCNHFGIARIPRTDNVEFFDPNYRYSFKEWQDWSFKQTDNKGFTRSSLMVLSGTEGKKQVDEPWFNLLLHETKFSGEKGLVGRNSVMFTLSLAYFSSGYSIETCEYNMFEFNNRLDQPLEEKEVIKLVRSAYSENYQGANREYITILCKAWVSSDLTSKDLFVRQGWFKFKKKRSERQRVHLSEWKEDLMAYISEKSDVYKPYLVTTKKEIREALGIPERTLDKLLKVLKANQEIFFKIKSGRNGGIQLASVKSLLLSIIKVKKEEKESYIKALTNSFDLEHTFIQETLNKLAERPKTDTQLDLFSYDTG
SIO_010081: E4Z98_RS09620
subclass of: SO_0000673
so part of: E4Z98_RS09620
location: 15493..16983
location: region:15493-16983:1
so has part: feature:15493-16983:1:exon

WP_001025003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15493-16983:1:exon

E4Z98_RS10085
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10085
so part of: sequence
location: 17331..17501
location: region:17331-17501:1
so has part: feature:17331-17501:1:exon
subclass of: SO_0000010

position:17331:1
position: 17331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17501:1
position: 17501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17331-17501:1:exon

E4Z98_RS10085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000713595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFIYRVLENDEVVAIFNEQEYAQDFIAYEKTISDKQFEIEKVALADWLLQPREF
SIO_010081: E4Z98_RS10085
subclass of: SO_0000673
so part of: E4Z98_RS10085
location: 17331..17501
location: region:17331-17501:1
so has part: feature:17331-17501:1:exon

WP_000713594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17331-17501:1:exon

E4Z98_RS09625
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09625
old locus tag: E4Z98_09625
so part of: sequence
location: 17515..18132
location: region:17515-18132:1
so has part: feature:17515-18132:1:exon
subclass of: SO_0000010

position:17515:1
position: 17515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18132:1
position: 18132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17515-18132:1:exon

E4Z98_RS09625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09625
old locus tag: E4Z98_09625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002295591.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQNLDRQLQALQGVSKVFSDKLSGQSVERPQLQAMLNYIREGDIVVVTELDRLGRNNKELTELMNAIQQKGATLEVLNLPSMNGIEDENLRRLINNLVIELYKYQAESERKRIKERQAQGIEIAKSKGKFKGRQHKFKENDPRLKHAFDLFLNGCSDKEVEEQTGINRRTFRRYRTRYNVTVDQRKNKGKRDS
SIO_010081: E4Z98_RS09625
subclass of: SO_0000673
so part of: E4Z98_RS09625
location: 17515..18132
location: region:17515-18132:1
so has part: feature:17515-18132:1:exon

WP_001062589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17515-18132:1:exon

E4Z98_RS09630
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09630
old locus tag: E4Z98_09630
so part of: sequence
location: 18132..20276
location: region:18132-20276:1
so has part: feature:18132-20276:1:exon
subclass of: SO_0000010

position:20276:1
position: 20276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18132-20276:1:exon

E4Z98_RS09630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09630
old locus tag: E4Z98_09630
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000108743.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IA DNA topoisomerase
translation: MSTVILAEKPSQALAYAQAFNQSDKKDGYFEIKDPLFTDETFITFGFGHLVELAEPGNYDEKWQNWKLESLPIFPDRYDFEVAKDKGKQFKIVAELLKKANTIIVATDSDREGENIAWSIIHKANAFSKDKTFKRLWINSLEKDVIRSGFQNLQPGMNYYPFYQEAQTRQIADWLIGMNASPLYTLNLQQKGVQGTFSLGRVQTPTLYLIFQRQEAIENFKKEPFFEVEASIKVNQGSFKGVLSPTQRFKTQEELLAFVSSKQAKIGNQEGRITDVQTKEKKTNSPSLFSLSSLQSKVNQLYKATASQTLKAMQGLYEAKLLSYPRTDTPFITENEFAYLKANFGKYSGFLGLDLEMVQTEPRKRYVDGSKVQEHHAIIPTKQVPTESALAKMDDLQRKIYALVVKTTVAMFLPDYLYEETKIQTKVADLLFQSIGKTPKQEGWKILFKQQNKEEKEDVQTLPLVIIGEHAEVDVKSAEKETQPPKAFTEGTLLTAMKTAGKTIDDEEAQKILKDTEGIGTEATRASIIEALKQKEYIQVIKNKLVVTEKGKLLCQAVESQHLLTSAEMTAKWETYLKKIGKREGNQENFITNIKKFIVHLLEAVPTDIEKLNFSDYQEQKEKEAEKSIVGKCPKCGNNIVLKKSFYGCSNYPECKFTLAEHFRKKKLTKTNVKELLEGKETLVKGIKNKEKKSYNAVVKIGEKGYIDFISFSK
SIO_010081: E4Z98_RS09630
subclass of: SO_0000673
so part of: E4Z98_RS09630
location: 18132..20276
location: region:18132-20276:1
so has part: feature:18132-20276:1:exon

WP_000108741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18132-20276:1:exon

E4Z98_RS09635
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09635
old locus tag: E4Z98_09635
so part of: sequence
location: 20365..21261
location: region:20365-21261:1
so has part: feature:20365-21261:1:exon
subclass of: SO_0000010

position:20365:1
position: 20365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21261:1
position: 21261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20365-21261:1:exon

E4Z98_RS09635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09635
old locus tag: E4Z98_09635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002355409.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIQYYYTKKEWGVVMEKEELKILEELRRILSNKNEAIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQATLTKDLAKTFKVELPRVNFYEGLKNGNLASSIVHLTDNLDLIPGTFDLMLLPKLTRSWTFENESRLLATLLAPLKSDYDLIIIDTVPTPSVYTNNAIVASDYVMIPLQAEEESTNNIQNYISYLIDLQEQFNPGLDMIGFVPYLVDTDSATIKSNLEELYKQHKEDNLVFQNIIKRSNKVSTWSKNGITEHKGYDKKVLSMYKNVFFEMLERIIQLENEKE
SIO_010081: E4Z98_RS09635
subclass of: SO_0000673
so part of: E4Z98_RS09635
location: 20365..21261
location: region:20365-21261:1
so has part: feature:20365-21261:1:exon

WP_001835294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20365-21261:1:exon

E4Z98_RS09640
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09640
old locus tag: E4Z98_09640
so part of: sequence
location: 21353..21568
location: region:21353-21568:1
so has part: feature:21353-21568:1:exon
subclass of: SO_0000010

position:21353:1
position: 21353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21568:1
position: 21568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21353-21568:1:exon

E4Z98_RS09640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09640
old locus tag: E4Z98_09640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002401482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide-binding protein
translation: MIVGNLGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIETAKNGGNVKEVMDQALEEYIRKYLPDKL
SIO_010081: E4Z98_RS09640
subclass of: SO_0000673
so part of: E4Z98_RS09640
location: 21353..21568
location: region:21353-21568:1
so has part: feature:21353-21568:1:exon

WP_001835296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21353-21568:1:exon

E4Z98_RS09645
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09645
old locus tag: E4Z98_09645
so part of: sequence
location: 21585..21857
location: region:21585-21857:1
so has part: feature:21585-21857:1:exon
subclass of: SO_0000010

position:21585:1
position: 21585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21857:1
position: 21857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21585-21857:1:exon

E4Z98_RS09645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09645
old locus tag: E4Z98_09645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002333002.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin
translation: MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLNKEKVA
SIO_010081: E4Z98_RS09645
subclass of: SO_0000673
so part of: E4Z98_RS09645
location: 21585..21857
location: region:21585-21857:1
so has part: feature:21585-21857:1:exon

WP_000301765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21585-21857:1:exon

E4Z98_RS09650
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09650
old locus tag: E4Z98_09650
so part of: sequence
location: 21859..22722
location: region:21859-22722:1
so has part: feature:21859-22722:1:exon
subclass of: SO_0000010

position:21859:1
position: 21859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22722:1
position: 22722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21859-22722:1:exon

E4Z98_RS09650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09650
old locus tag: E4Z98_09650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010782381.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKEIQPTLERIEQKMVLNKHQETPEFKAIQQKLESLQPPTPPIPKTPKLPGI
SIO_010081: E4Z98_RS09650
subclass of: SO_0000673
so part of: E4Z98_RS09650
location: 21859..22722
location: region:21859-22722:1
so has part: feature:21859-22722:1:exon

WP_001284311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21859-22722:1:exon

E4Z98_RS09655
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
gene: erm(B)
locus tag: E4Z98_RS09655
old locus tag: E4Z98_09655
so part of: sequence
location: complement(22985..23722)
location: region:22985-23722:-1
so has part: feature:22985-23722:-1:exon
subclass of: SO_0000010

position:22985:-1
position: 22985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23722:-1
position: 23722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22985-23722:-1:exon

E4Z98_RS09655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
gene: erm(B)
locus tag: E4Z98_RS09655
old locus tag: E4Z98_09655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011100845.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)
translation: MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGSIPYHLSTQIIKKVVFESHASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNNLSTVTYEQVLSIFNSYLLFNGRK
SIO_010081: E4Z98_RS09655
subclass of: SO_0000673
so part of: E4Z98_RS09655
location: complement(22985..23722)
location: region:22985-23722:-1
so has part: feature:22985-23722:-1:exon

WP_002292226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22985-23722:-1:exon

E4Z98_RS09660
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09660
old locus tag: E4Z98_09660
so part of: sequence
location: complement(23847..23930)
location: region:23847-23930:-1
so has part: feature:23847-23930:-1:exon
subclass of: SO_0000010

position:23847:-1
position: 23847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23930:-1
position: 23930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23847-23930:-1:exon

E4Z98_RS09660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09660
old locus tag: E4Z98_09660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001814874.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA methyltransferase attenuator leader peptide ErmL
translation: MLVFQMRYVDKTSTVLKQTKNSDYADK
SIO_010081: E4Z98_RS09660
subclass of: SO_0000673
so part of: E4Z98_RS09660
location: complement(23847..23930)
location: region:23847-23930:-1
so has part: feature:23847-23930:-1:exon

WP_031929417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23847-23930:-1:exon

E4Z98_RS10280
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS10280
pseudo: true
so part of: sequence
location: complement(23979..>24058)
location: region:23979-24058:-1
so has part: feature:23979-24058:-1:exon
subclass of: SO_0000010

position:23979:-1
position: 23979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24058:-1
position: 24058
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23979-24058:-1:exon

E4Z98_RS10280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS10280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000502600.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: peptide-binding protein
SIO_010081: E4Z98_RS10280
subclass of: SO_0000673
so part of: E4Z98_RS10280
location: complement(23979..>24058)
location: region:23979-24058:-1
so has part: feature:23979-24058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23979-24058:-1:exon

E4Z98_RS09670
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09670
old locus tag: E4Z98_09670
so part of: sequence
location: 24714..25031
location: region:24714-25031:1
so has part: feature:24714-25031:1:exon
subclass of: SO_0000010

position:24714:1
position: 24714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25031:1
position: 25031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24714-25031:1:exon

E4Z98_RS09670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09670
old locus tag: E4Z98_09670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002326830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKTKKLQLEDFTENEFFGTQEQQYLKAQVREELKEQGFIIDSSFEGDFKTWIGVYARPKDKPTYLDPQNDKEAEEQEQYSINGFKQDFSEWFEWEIKNLKIKEM
SIO_010081: E4Z98_RS09670
subclass of: SO_0000673
so part of: E4Z98_RS09670
location: 24714..25031
location: region:24714-25031:1
so has part: feature:24714-25031:1:exon

WP_002300567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24714-25031:1:exon

E4Z98_RS09680
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09680
old locus tag: E4Z98_09680
so part of: sequence
location: 25565..26062
location: region:25565-26062:1
so has part: feature:25565-26062:1:exon
subclass of: SO_0000010

position:25565:1
position: 25565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26062:1
position: 26062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25565-26062:1:exon

E4Z98_RS09680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09680
old locus tag: E4Z98_09680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010782380.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaJ
translation: MKYIKNVETLEELKKAYKKLALKLHPDCGGNEEEMKILNNEYDELFSKLKNTHKNKDGETYTKETTETPEQFKDIINQLFNLKMDGVSIEIVGTFIWLTGNTKPYKDDIKALEFRYSPKKYAWYKAPSDYKKRSRKNYDMDTIRGMYGSQKVKEDKEEKKYLQAN
SIO_010081: E4Z98_RS09680
subclass of: SO_0000673
so part of: E4Z98_RS09680
location: 25565..26062
location: region:25565-26062:1
so has part: feature:25565-26062:1:exon

WP_002300565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25565-26062:1:exon

E4Z98_RS09685
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09685
old locus tag: E4Z98_09685
so part of: sequence
location: 26096..26401
location: region:26096-26401:1
so has part: feature:26096-26401:1:exon
subclass of: SO_0000010

position:26096:1
position: 26096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26401:1
position: 26401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26096-26401:1:exon

E4Z98_RS09685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09685
old locus tag: E4Z98_09685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002325622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIKIKKINFEGNILKVIKATVTEMRGINNHQKYDFDLYQIEARSPMSTREITLTVDFIEKKVLGDIIAFGDWYDLDIESVNEILKQLKKEGQTLRTINFI
SIO_010081: E4Z98_RS09685
subclass of: SO_0000673
so part of: E4Z98_RS09685
location: 26096..26401
location: region:26096-26401:1
so has part: feature:26096-26401:1:exon

WP_010711855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26096-26401:1:exon

E4Z98_RS09695
type: Gene
subclass of: SO_0000704
RO_0002162: 2562451
locus tag: E4Z98_RS09695
old locus tag: E4Z98_09695
so part of: sequence
location: complement(26685..26984)
location: region:26685-26984:-1
so has part: feature:26685-26984:-1:exon
subclass of: SO_0000010

position:26685:-1
position: 26685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26984:-1
position: 26984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26685-26984:-1:exon

E4Z98_RS09695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2562451
locus tag: E4Z98_RS09695
old locus tag: E4Z98_09695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002332653.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENQDQNIKTENEQIIPKTKPKKRKKKTVSDIELQIKELQKKKEELILKSKADIGDFVLSILSKNDISIESIEENKELFYDELETLLNANSQNFSELFK
SIO_010081: E4Z98_RS09695
subclass of: SO_0000673
so part of: E4Z98_RS09695
location: complement(26685..26984)
location: region:26685-26984:-1
so has part: feature:26685-26984:-1:exon

WP_002301627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26685-26984:-1:exon