Paracoccus liaowanqingii strain 2251 plasmid unnamed1, complete sequence.
Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.
Paracoccus liaowanqingii sp. nov., isolated from Tibetan antelope (Pantholops hodgsonii)
Submitted (29-MAY-2019) National Institue for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping District Changbai Road, No. 155, Beijing, Beijing 102206, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP040765.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. 4.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/23/2022 04:22:22\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,759\nCDSs (total) :: 4,694\nGenes (coding) :: 4,486\nCDSs (with protein) :: 4,486\nGenes (RNA) :: 65\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 3\nPseudo Genes (total) :: 208\nCDSs (without protein) :: 208\nPseudo Genes (ambiguous residues) :: 0 of 208\nPseudo Genes (frameshifted) :: 104 of 208\nPseudo Genes (incomplete) :: 126 of 208\nPseudo Genes (internal stop) :: 32 of 208\nPseudo Genes (multiple problems) :: 49 of 208\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type material of Paracoccus liaowanqingii
COORDINATES: similar to AA sequence:RefSeq:WP_012452277.1
GO:0004803 - transposase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611977.1
programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011911050.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013580892.1
COORDINATES: protein motif:HMM:NF019174.2
COORDINATES: similar to AA sequence:RefSeq:WP_017485318.1
COORDINATES: protein motif:HMM:NF033546.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976703.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007679836.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930855.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611976.1
COORDINATES: similar to AA sequence:RefSeq:WP_013634892.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611979.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016555995.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018857891.1
COORDINATES: similar to AA sequence:RefSeq:WP_012496729.1
COORDINATES: similar to AA sequence:RefSeq:WP_020091245.1
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: similar to AA sequence:RefSeq:WP_007561830.1
COORDINATES: similar to AA sequence:RefSeq:WP_010681951.1
GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016556003.1
COORDINATES: protein motif:HMM:NF014606.2
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007691598.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_012318744.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997908.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_076612008.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009488718.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000628.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014529321.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014199901.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008943394.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008651130.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199900.1
COORDINATES: similar to AA sequence:RefSeq:WP_009277569.1
COORDINATES: similar to AA sequence:RefSeq:WP_019401283.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019461847.1
COORDINATES: similar to AA sequence:RefSeq:WP_002722069.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001072.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
Fe(3+)-hydroxamate ABC transporter permease FhuB
COORDINATES: similar to AA sequence:RefSeq:WP_010139984.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001070.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_011750742.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008437438.1
COORDINATES: similar to AA sequence:RefSeq:WP_020091748.1
COORDINATES: similar to AA sequence:RefSeq:WP_020094507.1
COORDINATES: similar to AA sequence:RefSeq:WP_002627035.1
COORDINATES: similar to AA sequence:RefSeq:WP_020041646.1
COORDINATES: similar to AA sequence:RefSeq:WP_005855994.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007163631.1
COORDINATES: similar to AA sequence:RefSeq:WP_019172545.1
COORDINATES: similar to AA sequence:RefSeq:WP_019367746.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_043766072.1
COORDINATES: similar to AA sequence:RefSeq:WP_006200010.1
COORDINATES: similar to AA sequence:RefSeq:WP_018575427.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF016268.2
COORDINATES: similar to AA sequence:RefSeq:WP_011504355.1
COORDINATES: similar to AA sequence:RefSeq:WP_020086006.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014131497.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011749400.1
sulfurtransferase/chromate resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_009817900.1
COORDINATES: similar to AA sequence:RefSeq:WP_009817899.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120830.1
COORDINATES: similar to AA sequence:RefSeq:WP_007117802.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009820206.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012621.2
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019956937.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003500183.1
COORDINATES: similar to AA sequence:RefSeq:WP_014878931.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745756.1
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Cu(I)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002723228.1
COORDINATES: similar to AA sequence:RefSeq:WP_020049947.1
COORDINATES: similar to AA sequence:RefSeq:WP_009574143.1
COORDINATES: similar to AA sequence:RefSeq:WP_007118550.1
COORDINATES: similar to AA sequence:RefSeq:WP_004435896.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002721677.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010139188.1
COORDINATES: similar to AA sequence:RefSeq:WP_005613370.1
COORDINATES: similar to AA sequence:RefSeq:WP_005848461.1
COORDINATES: similar to AA sequence:RefSeq:WP_009812249.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_009812250.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012115376.1
metal/formaldehyde-sensitive transcriptional repressor
COORDINATES: similar to AA sequence:RefSeq:WP_006022303.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
CDF family Co(II)/Ni(II) efflux transporter DmeF
COORDINATES: protein motif:HMM:NF012739.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012631342.1
peptidase domain-containing ABC transporter
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_008840124.1
COORDINATES: protein motif:HMM:NF012869.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008279860.1
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018390189.1
COORDINATES: similar to AA sequence:RefSeq:WP_015126371.1
WGxxGxxG-CTERM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611905.1
COORDINATES: similar to AA sequence:RefSeq:WP_007811349.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011970376.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_007817478.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611116.1
COORDINATES: similar to AA sequence:RefSeq:WP_007813144.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974630.1
COORDINATES: protein motif:HMM:NF019205.2
COORDINATES: similar to AA sequence:RefSeq:WP_011331451.1
methanogen output domain 1-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611445.1
GO:0015074 - DNA integration [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611845.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024934.2
COORDINATES: similar to AA sequence:RefSeq:WP_012650372.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_076611917.1
COORDINATES: similar to AA sequence:RefSeq:WP_020041040.1
COORDINATES: similar to AA sequence:RefSeq:WP_015497206.1
COORDINATES: similar to AA sequence:RefSeq:WP_013960491.1
COORDINATES: protein motif:HMM:NF016807.2
COORDINATES: similar to AA sequence:RefSeq:WP_015317017.1
COORDINATES: protein motif:HMM:NF012514.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019956280.1
COORDINATES: similar to AA sequence:RefSeq:WP_007798763.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: similar to AA sequence:RefSeq:WP_019956277.1
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: similar to AA sequence:RefSeq:WP_006019777.1
COORDINATES: protein motif:HMM:NF024748.2
COORDINATES: protein motif:HMM:NF018525.2
COORDINATES: similar to AA sequence:RefSeq:WP_007813331.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_019848268.1
COORDINATES: similar to AA sequence:RefSeq:WP_014852384.1
COORDINATES: similar to AA sequence:RefSeq:WP_007801514.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004755763.1
COORDINATES: protein motif:HMM:NF024685.2
COORDINATES: similar to AA sequence:RefSeq:WP_007253673.1
COORDINATES: similar to AA sequence:RefSeq:WP_012452662.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004872543.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_019857112.1
COORDINATES: similar to AA sequence:RefSeq:WP_014428226.1
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: similar to AA sequence:RefSeq:WP_014880565.1
COORDINATES: similar to AA sequence:RefSeq:WP_013845952.1
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_009804476.1
COORDINATES: similar to AA sequence:RefSeq:WP_013503012.1
COORDINATES: similar to AA sequence:RefSeq:WP_019964385.1
COORDINATES: similar to AA sequence:RefSeq:WP_017978855.1
COORDINATES: protein motif:HMM:NF039524.1
COORDINATES: similar to AA sequence:RefSeq:WP_008128142.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012706532.1
COORDINATES: similar to AA sequence:RefSeq:WP_003526114.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548528.1
COORDINATES: protein motif:HMM:NF020413.2
COORDINATES: similar to AA sequence:RefSeq:WP_020057705.1
GO:0004801 - transaldolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013960170.1
COORDINATES: protein motif:HMM:NF012442.2
COORDINATES: similar to AA sequence:RefSeq:WP_009763017.1
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015931270.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0042619 - poly-hydroxybutyrate biosynthetic process [Evidence IEA]
class I poly(R)-hydroxyalkanoic acid synthase
COORDINATES: similar to AA sequence:RefSeq:WP_003170430.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_002725081.1
COORDINATES: similar to AA sequence:RefSeq:WP_017157036.1
COORDINATES: protein motif:HMM:NF021524.2
COORDINATES: protein motif:HMM:NF022603.2
COORDINATES: similar to AA sequence:RefSeq:WP_009740924.1
TIGR03885 family FMN-dependent LLM class oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008130749.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405493.1
COORDINATES: protein motif:HMM:NF023697.2
COORDINATES: similar to AA sequence:RefSeq:WP_011455331.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750836.1
COORDINATES: similar to AA sequence:RefSeq:WP_018261849.1
COORDINATES: similar to AA sequence:RefSeq:WP_009814784.1
COORDINATES: protein motif:HMM:TIGR00229.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016874514.1
COORDINATES: similar to AA sequence:RefSeq:WP_008996905.1
COORDINATES: similar to AA sequence:RefSeq:WP_013169094.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611729.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012332642.1
FAD-dependent tricarballylate dehydrogenase TcuA
COORDINATES: similar to AA sequence:RefSeq:WP_019963015.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019963014.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013394108.1
COORDINATES: similar to AA sequence:RefSeq:WP_018445032.1
COORDINATES: similar to AA sequence:RefSeq:WP_014130527.1
COORDINATES: similar to AA sequence:RefSeq:WP_017493955.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_005851794.1
COORDINATES: similar to AA sequence:RefSeq:WP_009572517.1
COORDINATES: similar to AA sequence:RefSeq:WP_014130529.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861844.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_005861842.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF020110.2
COORDINATES: similar to AA sequence:RefSeq:WP_005979212.1
COORDINATES: similar to AA sequence:RefSeq:WP_015844527.1
D-2-hydroxyacid dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_052642793.1
COORDINATES: similar to AA sequence:RefSeq:WP_019171537.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120059.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003167764.1
COORDINATES: similar to AA sequence:RefSeq:WP_012092589.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187387.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820070.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_009827042.1
COORDINATES: similar to AA sequence:RefSeq:WP_008335662.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820069.1
COORDINATES: similar to AA sequence:RefSeq:WP_013640721.1
COORDINATES: similar to AA sequence:RefSeq:WP_016558624.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724721.1
COORDINATES: similar to AA sequence:RefSeq:WP_020812558.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724724.1
COORDINATES: similar to AA sequence:RefSeq:WP_007775290.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_020038983.1
COORDINATES: protein motif:HMM:NF012516.2
COORDINATES: similar to AA sequence:RefSeq:WP_020809391.1
COORDINATES: similar to AA sequence:RefSeq:WP_012600147.1
COORDINATES: similar to AA sequence:RefSeq:WP_009845881.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017092763.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
DctP family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018238425.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014331128.1
COORDINATES: similar to AA sequence:RefSeq:WP_004431829.1
COORDINATES: similar to AA sequence:RefSeq:WP_015343095.1
COORDINATES: similar to AA sequence:RefSeq:WP_006615228.1
COORDINATES: similar to AA sequence:RefSeq:WP_018238420.1
COORDINATES: similar to AA sequence:RefSeq:WP_004431840.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001554.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991619.1
COORDINATES: similar to AA sequence:RefSeq:WP_006470133.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001551.1
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_009491725.1
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: protein motif:HMM:NF018979.2
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018001548.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550900.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013165194.1
COORDINATES: similar to AA sequence:RefSeq:WP_012496475.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808852.1
COORDINATES: similar to AA sequence:RefSeq:WP_003567609.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018429222.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006315173.1
COORDINATES: similar to AA sequence:RefSeq:WP_006316530.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421528.1
COORDINATES: similar to AA sequence:RefSeq:WP_012631045.1
COORDINATES: similar to AA sequence:RefSeq:WP_011842440.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009572678.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_020009060.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005662626.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019955077.1
COORDINATES: similar to AA sequence:RefSeq:WP_011907535.1
COORDINATES: similar to AA sequence:RefSeq:WP_012226982.1