Atlantibacter subterranea strain LH84-a plasmid pLH84-a-A, complete sequence.
type: Entry
definition: Atlantibacter subterranea strain LH84-a plasmid pLH84-a-A, complete sequence.
sequence version: NZ_CP100495.1
sequence date: 2023-07-22
sequence: sequence
division: CON
label: NZ_CP100495.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN29499320
keyword: RefSeq
source: Atlantibacter subterranea
organism: Atlantibacter subterranea
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Atlantibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP100495.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100x, 100x\nSequencing Technology :: Illumina MiniSeq, Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/22/2023 02:37:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,551\nCDSs (total) :: 4,436\nGenes (coding) :: 4,382\nCDSs (with protein) :: 4,382\nGenes (RNA) :: 115\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 84\nncRNAs :: 9\nPseudo Genes (total) :: 54\nCDSs (without protein) :: 54\nPseudo Genes (ambiguous residues) :: 0 of 54\nPseudo Genes (frameshifted) :: 22 of 54\nPseudo Genes (incomplete) :: 38 of 54\nPseudo Genes (internal stop) :: 9 of 54\nPseudo Genes (multiple problems) :: 12 of 54\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 47652
topology: circular
so has quality: SO_0000988
location: 1..47652
location: region:1-47652:1
RO_0002162: 255519

NZ_CP100495
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN29499320
type: BioSample
SIO_000068: biosample

1
title: ESBL-producing Enterobacteriaceae from poultry
author: Biggel, M.
journal: Unpublished

2
title: Direct Submission
author: Biggel, M.
journal: Submitted (05-JUL-2022) Institute for Food Safety and Hygiene, University of Zurich, Winterthurerstrasse 272, Zurich 8057, Switzerland

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47652:1
position: 47652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-47652:1:source
so part of: sequence
organism: Atlantibacter subterranea
mol type: genomic DNA
strain: LH84-a
isolation source: pooled poultry feces
host: Gallus gallus domesticus
plasmid: pLH84-a-A
country: Switzerland
collection date: 2022
collected by: Institute for Food Safety and Hygiene, University of Zurich

255519
type: Taxonomy
SIO_000068: taxonomy

NLZ15_RS22340
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22340
old locus tag: NLZ15_22340
so part of: sequence
location: complement(341..580)
location: region:341-580:-1
so has part: feature:341-580:-1:exon
subclass of: SO_0000010

position:341:-1
position: 341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580:-1
position: 580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341-580:-1:exon

NLZ15_RS22340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22340
old locus tag: NLZ15_22340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRHYEIDSAWRASIKREPNGRQTVTTEAFVSQLALINFHWSCRQANQWIETYVTVFKDISTQEGENRTFMLFNPNGGR
SIO_010081: NLZ15_RS22340
subclass of: SO_0000673
so part of: NLZ15_RS22340
location: complement(341..580)
location: region:341-580:-1
so has part: feature:341-580:-1:exon

WP_001549892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341-580:-1:exon

NLZ15_RS22345
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22345
old locus tag: NLZ15_22345
so part of: sequence
location: complement(667..1329)
location: region:667-1329:-1
so has part: feature:667-1329:-1:exon
subclass of: SO_0000010

position:667:-1
position: 667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329:-1
position: 1329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667-1329:-1:exon

NLZ15_RS22345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22345
old locus tag: NLZ15_22345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549893.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTQTVPKGFVRAYLRASTTEQDATRALDTINTFAIERGLSICNYYIENESGSKLERPELFRLLKDCQQNDILLVEDVDRLSRLVGEDWNTLKKMIRQKDIRVVAVNVPTTWLASGHNDFDSRMFSAINDMLLDMLAAVARRDYEQRRERQQQGIARAKREGKYKGRQVNQSRYDAINRLIASGSSWSQIQKVLGCSRATISKAVKQQTVNKMNHEPEGRE
SIO_010081: NLZ15_RS22345
subclass of: SO_0000673
so part of: NLZ15_RS22345
location: complement(667..1329)
location: region:667-1329:-1
so has part: feature:667-1329:-1:exon

WP_001549893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:667-1329:-1:exon

NLZ15_RS22350
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22350
old locus tag: NLZ15_22350
so part of: sequence
location: 1710..2372
location: region:1710-2372:1
so has part: feature:1710-2372:1:exon
subclass of: SO_0000010

position:1710:1
position: 1710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2372:1
position: 2372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1710-2372:1:exon

NLZ15_RS22350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22350
old locus tag: NLZ15_22350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000516401.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: division plane positioning ATPase MipZ
translation: MGKILLVVSDKGGVGKSTYVANTGSMLVNKGKSVIILKTDKNHDLLSWNEKRTDNGLLTIPVHAAYGNVSNEIKRLSKLCEVLIVDCPGHDSQEFRSALTVSDIVVTLVKPSSDFESETLTSVTEKIRTAQKANAALEPWVLFTRINSAKPRHRKAAIDLDKLLRSDNIWIQPLKTRISELDVYESACNEGAGVHDVSRASSLSTAKAQIELVAQEIGIL
SIO_010081: NLZ15_RS22350
subclass of: SO_0000673
so part of: NLZ15_RS22350
location: 1710..2372
location: region:1710-2372:1
so has part: feature:1710-2372:1:exon

WP_000516402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1710-2372:1:exon

NLZ15_RS22355
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22355
old locus tag: NLZ15_22355
so part of: sequence
location: 2472..2756
location: region:2472-2756:1
so has part: feature:2472-2756:1:exon
subclass of: SO_0000010

position:2472:1
position: 2472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2756:1
position: 2756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472-2756:1:exon

NLZ15_RS22355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22355
old locus tag: NLZ15_22355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001371664.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALKLNRPNIDESQQPATNAETARFISGATRAPVAGKPKLMNFRLPAYFEEILEAEAQRTGQSKTTVLKAALAAFDNLDENLKNHWLLESAKLG
SIO_010081: NLZ15_RS22355
subclass of: SO_0000673
so part of: NLZ15_RS22355
location: 2472..2756
location: region:2472-2756:1
so has part: feature:2472-2756:1:exon

WP_001185481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2472-2756:1:exon

NLZ15_RS22360
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22360
old locus tag: NLZ15_22360
so part of: sequence
location: 2962..3273
location: region:2962-3273:1
so has part: feature:2962-3273:1:exon
subclass of: SO_0000010

position:2962:1
position: 2962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3273:1
position: 3273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2962-3273:1:exon

NLZ15_RS22360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22360
old locus tag: NLZ15_22360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000469598.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFIFRYIKTLINIYLLYIQPILGMFLIGIGLWGFYAPDEGTCTNLNIELCAVSAIDVLKPAIFVFLGIITVAGWYFTELQPKLRGEGKYMKVKTGVKPEDFVK
SIO_010081: NLZ15_RS22360
subclass of: SO_0000673
so part of: NLZ15_RS22360
location: 2962..3273
location: region:2962-3273:1
so has part: feature:2962-3273:1:exon

WP_000469598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2962-3273:1:exon

NLZ15_RS22365
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22365
old locus tag: NLZ15_22365
so part of: sequence
location: 3309..3593
location: region:3309-3593:1
so has part: feature:3309-3593:1:exon
subclass of: SO_0000010

position:3309:1
position: 3309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3593:1
position: 3593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3309-3593:1:exon

NLZ15_RS22365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22365
old locus tag: NLZ15_22365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001043731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKSWLEQQVQNEKLKKVQEEKKDGTIQKGLYRVRIKDKYRWDLWENDFRVVIAYSKDDAELKFTEMTGFNEHYYIESIEKIVLSDIEKILLEN
SIO_010081: NLZ15_RS22365
subclass of: SO_0000673
so part of: NLZ15_RS22365
location: 3309..3593
location: region:3309-3593:1
so has part: feature:3309-3593:1:exon

WP_001043731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3309-3593:1:exon

NLZ15_RS22370
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
gene: ddp1
locus tag: NLZ15_RS22370
old locus tag: NLZ15_22370
so part of: sequence
location: complement(3614..3967)
location: region:3614-3967:-1
so has part: feature:3614-3967:-1:exon
subclass of: SO_0000010

position:3614:-1
position: 3614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3967:-1
position: 3967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3614-3967:-1:exon

NLZ15_RS22370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
gene: ddp1
locus tag: NLZ15_RS22370
old locus tag: NLZ15_22370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000202950.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA distortion polypeptide 3
translation: MKYQVKEFINEKYSKAVNILKDNLKEHYHIFYGLRLSEILFPASEYGSEMFFQEFEAINSVILPLVIFDLIDRKPIMVIGFGEVCGVDSLVDSGIEVVSLDGLSDLLLVEKLTPLFN
SIO_010081: NLZ15_RS22370
subclass of: SO_0000673
so part of: NLZ15_RS22370
location: complement(3614..3967)
location: region:3614-3967:-1
so has part: feature:3614-3967:-1:exon

WP_000877224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3614-3967:-1:exon

NLZ15_RS22375
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22375
old locus tag: NLZ15_22375
so part of: sequence
location: complement(4155..4598)
location: region:4155-4598:-1
so has part: feature:4155-4598:-1:exon
subclass of: SO_0000010

position:4155:-1
position: 4155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4598:-1
position: 4598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4155-4598:-1:exon

NLZ15_RS22375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22375
old locus tag: NLZ15_22375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001074369.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKIYEFPQGAERSKLKKEIIRERKKRLRETNGNPVIRHAKWFWFYLRLATAGALHLVSVISLAVLGAFSKAIFWIGGMLCVVTWFHLERQFWTPQNFTIPVIVTLWGLSLFATPLMELLNKKMPWYRLLVPDAKHTSTEATNDDQP
SIO_010081: NLZ15_RS22375
subclass of: SO_0000673
so part of: NLZ15_RS22375
location: complement(4155..4598)
location: region:4155-4598:-1
so has part: feature:4155-4598:-1:exon

WP_001074369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4155-4598:-1:exon

NLZ15_RS22380
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22380
old locus tag: NLZ15_22380
so part of: sequence
location: complement(4607..5620)
location: region:4607-5620:-1
so has part: feature:4607-5620:-1:exon
subclass of: SO_0000010

position:4607:-1
position: 4607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5620:-1
position: 5620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4607-5620:-1:exon

NLZ15_RS22380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22380
old locus tag: NLZ15_22380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001348704.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MRLLLSLDMKILRSSYLKVRGFLIKGCIVVLNYNLCGVMICLHRKGYMRLIVKTVTGLTKVRHRNEVGVTLASLSLSAKRVLFLALCQIDTKEMLDDDILEVDADFFSKATSLDKYASYAALKEGAKVLSSTTLVLNRDDLKNLADELGILSSKNKIPDRLDLNLTEFCAYYDHLATVRIKFTNTAKRYFSKLIGSENRYTTQVLKSVVLLNSVNSTNLYQVIRKYYSQNSSKKSFDISVDDLKEEMGLYTIEEGEKKYKYPKYSFFVRDVINKSINEIIEKTEINQLSFSVVGKKGRMAHMLRFEFSINEKSSSFSEDDMAFLEEFDKVVPPKKNK
SIO_010081: NLZ15_RS22380
subclass of: SO_0000673
so part of: NLZ15_RS22380
location: complement(4607..5620)
location: region:4607-5620:-1
so has part: feature:4607-5620:-1:exon

WP_001348704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4607-5620:-1:exon

NLZ15_RS22385
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22385
old locus tag: NLZ15_22385
pseudo: true
so part of: sequence
location: <6231..6383
location: region:6231-6383:1
so has part: feature:6231-6383:1:exon
subclass of: SO_0000010

position:6231:1
position: 6231
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6383:1
position: 6383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6231-6383:1:exon

NLZ15_RS22385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22385
old locus tag: NLZ15_22385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000127484.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA-binding protein
SIO_010081: NLZ15_RS22385
subclass of: SO_0000673
so part of: NLZ15_RS22385
location: <6231..6383
location: region:6231-6383:1
so has part: feature:6231-6383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6231-6383:1:exon

NLZ15_RS22390
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22390
old locus tag: NLZ15_22390
so part of: sequence
location: 6973..7488
location: region:6973-7488:1
so has part: feature:6973-7488:1:exon
subclass of: SO_0000010

position:6973:1
position: 6973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7488:1
position: 7488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6973-7488:1:exon

NLZ15_RS22390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22390
old locus tag: NLZ15_22390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001025391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaJ domain-containing protein
translation: MNIQEALNVFGLSGDLTEKDIKAAYKKAALKYHPDRNPLGAELMKAVNAAFDFLMANIDKINQFQSTDENARYNYGEDLEKVLNTLSGLTGIVYEVIGNWVWISGETKEHKDILKEMGCKWASKKKQWFYRPEEHKSRWNRKEHSIEEIREMYGTAGKRKASGWTRVEASA
SIO_010081: NLZ15_RS22390
subclass of: SO_0000673
so part of: NLZ15_RS22390
location: 6973..7488
location: region:6973-7488:1
so has part: feature:6973-7488:1:exon

WP_001025390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6973-7488:1:exon

NLZ15_RS22395
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22395
old locus tag: NLZ15_22395
so part of: sequence
location: 7547..7783
location: region:7547-7783:1
so has part: feature:7547-7783:1:exon
subclass of: SO_0000010

position:7547:1
position: 7547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7783:1
position: 7783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7547-7783:1:exon

NLZ15_RS22395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22395
old locus tag: NLZ15_22395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNKTITEAELINIFESYGAYICPDEIEVTAKECNENGSVLHRGLNAEGWAHLFAKEEAYQQECEAQEAASDDGHFDE
SIO_010081: NLZ15_RS22395
subclass of: SO_0000673
so part of: NLZ15_RS22395
location: 7547..7783
location: region:7547-7783:1
so has part: feature:7547-7783:1:exon

WP_000792381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7547-7783:1:exon

NLZ15_RS22400
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22400
old locus tag: NLZ15_22400
so part of: sequence
location: 7843..8394
location: region:7843-8394:1
so has part: feature:7843-8394:1:exon
subclass of: SO_0000010

position:7843:1
position: 7843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8394:1
position: 8394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7843-8394:1:exon

NLZ15_RS22400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22400
old locus tag: NLZ15_22400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549906.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEQKNFFERYKPVFEIVCRILGNGWRVNLLDDCQYRIKLTSPDFKNYSIHIRMEKGRLVIIGSVDSRSWRSPYHTCTVSPERNPVEIAADIEKKILSDALDNVDMAREYEQQLQQKREKKLILKGMLSRLVHLESWHGTLTGFKVENGLDGNVSERGDGYEMVIRGLSVDQLIKVAGFIKQL
SIO_010081: NLZ15_RS22400
subclass of: SO_0000673
so part of: NLZ15_RS22400
location: 7843..8394
location: region:7843-8394:1
so has part: feature:7843-8394:1:exon

WP_000662998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843-8394:1:exon

NLZ15_RS22405
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22405
old locus tag: NLZ15_22405
so part of: sequence
location: 8403..8672
location: region:8403-8672:1
so has part: feature:8403-8672:1:exon
subclass of: SO_0000010

position:8403:1
position: 8403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8672:1
position: 8672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8403-8672:1:exon

NLZ15_RS22405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22405
old locus tag: NLZ15_22405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEVLSDRKNKGNVTYRIVVSEDATRLFIELEKLMKVRSKEADKKTTKKIVFQKSFYYEEFSNVKDEIDDPILLKFYTDTIVKVQNHEF
SIO_010081: NLZ15_RS22405
subclass of: SO_0000673
so part of: NLZ15_RS22405
location: 8403..8672
location: region:8403-8672:1
so has part: feature:8403-8672:1:exon

WP_001006717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8403-8672:1:exon

NLZ15_RS22410
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22410
old locus tag: NLZ15_22410
so part of: sequence
location: 8662..8904
location: region:8662-8904:1
so has part: feature:8662-8904:1:exon
subclass of: SO_0000010

position:8662:1
position: 8662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8904:1
position: 8904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8662-8904:1:exon

NLZ15_RS22410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22410
old locus tag: NLZ15_22410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000008707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFKPTPEEVKQARIKAGFTQQEAAERFGFTLSAWQAKETSGKTSRGLAAGTYELLLLLADEHPDYQLVKREKNQDKVTK
SIO_010081: NLZ15_RS22410
subclass of: SO_0000673
so part of: NLZ15_RS22410
location: 8662..8904
location: region:8662-8904:1
so has part: feature:8662-8904:1:exon

WP_000008707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8662-8904:1:exon

NLZ15_RS22415
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22415
old locus tag: NLZ15_22415
so part of: sequence
location: 8998..9336
location: region:8998-9336:1
so has part: feature:8998-9336:1:exon
subclass of: SO_0000010

position:8998:1
position: 8998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9336:1
position: 9336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8998-9336:1:exon

NLZ15_RS22415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22415
old locus tag: NLZ15_22415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549908.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTYVITFQALNTKKEKITCSAFVHSETLFLAVHSFEDKNRGRGYVITSVSELLSEELTAKNSLKKNINFWFNECGLSKSEVINEVINWKNFAYTLKELEEAKNEAIRELRN
SIO_010081: NLZ15_RS22415
subclass of: SO_0000673
so part of: NLZ15_RS22415
location: 8998..9336
location: region:8998-9336:1
so has part: feature:8998-9336:1:exon

WP_101529254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8998-9336:1:exon

NLZ15_RS22420
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22420
old locus tag: NLZ15_22420
so part of: sequence
location: 9411..9575
location: region:9411-9575:1
so has part: feature:9411-9575:1:exon
subclass of: SO_0000010

position:9411:1
position: 9411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9575:1
position: 9575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9411-9575:1:exon

NLZ15_RS22420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22420
old locus tag: NLZ15_22420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000004083.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSERMLSAIQTVEKGGRPVFPLMPFSAFPEYMALLRKALEKKETKALIEKQEVL
SIO_010081: NLZ15_RS22420
subclass of: SO_0000673
so part of: NLZ15_RS22420
location: 9411..9575
location: region:9411-9575:1
so has part: feature:9411-9575:1:exon

WP_000004083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9411-9575:1:exon

NLZ15_RS22425
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22425
old locus tag: NLZ15_22425
pseudo: true
so part of: sequence
location: 9572..9819
location: region:9572-9819:1
so has part: feature:9572-9819:1:exon
subclass of: SO_0000010

position:9572:1
position: 9572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9819:1
position: 9819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9572-9819:1:exon

NLZ15_RS22425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22425
old locus tag: NLZ15_22425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549910.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: NLZ15_RS22425
subclass of: SO_0000673
so part of: NLZ15_RS22425
location: 9572..9819
location: region:9572-9819:1
so has part: feature:9572-9819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9572-9819:1:exon

NLZ15_RS22430
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
gene: ddp1
locus tag: NLZ15_RS22430
old locus tag: NLZ15_22430
so part of: sequence
location: 10160..10705
location: region:10160-10705:1
so has part: feature:10160-10705:1:exon
subclass of: SO_0000010

position:10160:1
position: 10160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10705:1
position: 10705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10160-10705:1:exon

NLZ15_RS22430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
gene: ddp1
locus tag: NLZ15_RS22430
old locus tag: NLZ15_22430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000757693.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA distortion polypeptide 1
translation: MKKVQFRIEESQHDDLLDCLKTLYPDEPGLTVAKGMKLLANALLKSKVKNEDVNVSKDNDDFIKTTMYLTGKQRTLIEKAAHRHGWNLSRECRYRIQTTLENELDFFDQELLVMNRCRNAIDKIGRNFHYIIVNDNARVLDKDGFYQDAERLSSEIMSLKSEFENYIMLCKGRTVSNKVEV
SIO_010081: NLZ15_RS22430
subclass of: SO_0000673
so part of: NLZ15_RS22430
location: 10160..10705
location: region:10160-10705:1
so has part: feature:10160-10705:1:exon

WP_001348698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10160-10705:1:exon

NLZ15_RS22435
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
gene: mobP1
locus tag: NLZ15_RS22435
old locus tag: NLZ15_22435
so part of: sequence
location: 10708..11868
location: region:10708-11868:1
so has part: feature:10708-11868:1:exon
subclass of: SO_0000010

position:10708:1
position: 10708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11868:1
position: 11868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10708-11868:1:exon

NLZ15_RS22435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
gene: mobP1
locus tag: NLZ15_RS22435
old locus tag: NLZ15_22435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549912.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobP1 family relaxase
translation: MGVYVDKEFRVKRKSSEAGRKSAFAHKVKNGGKNYQRNVQERINRKGASKEVVVKISGGAITRQGVRNSIDYMSRESELPVMSESGQVWKGDEIQEAKEHMIDRANDPQNVFDDKGKENKKVTQNIVFSPPVSAKVKPEDLLESVRKTMNKKYPNHRFVLGYHNDKKEHPHVHVVFRIRDNDGKRADIRKKDLREIRTGFCEELKMKGYDVKATHKQQHGLNQSIKDAHKTAPKRQKGVYEVVDVGYDHYQNDKTKPKQHFIKLKTLNKGVEKTYWGADFGELTTRENVKKGDLVKLKKLGQKEVKIPALDKNGVQHGWKTAHRNEWQLENLGVKGIDRISSSSKELVLNSAEMIKKQQLQMRNFSQIKQSMIQSEQKVKIGIRLG
SIO_010081: NLZ15_RS22435
subclass of: SO_0000673
so part of: NLZ15_RS22435
location: 10708..11868
location: region:10708-11868:1
so has part: feature:10708-11868:1:exon

WP_004199101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10708-11868:1:exon

NLZ15_RS22440
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22440
old locus tag: NLZ15_22440
so part of: sequence
location: 12221..12730
location: region:12221-12730:1
so has part: feature:12221-12730:1:exon
subclass of: SO_0000010

position:12221:1
position: 12221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12730:1
position: 12730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12221-12730:1:exon

NLZ15_RS22440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22440
old locus tag: NLZ15_22440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000455437.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination NusG family protein
translation: MEWYVLQFTTTRFAAVFAHLERLNFSYFCPMETERYRRPDKIISYRERRLPLFPGYLFIQADFEEVHSTTITAIPYVQRFISFGGEPLPVPEDVMAELLYRQSHTTAQANLLRKSIPHDFAEILLMDNPQQRSMAFIHYITERSLTHKMKRKKNDCYPKKNRNETQAPT
SIO_010081: NLZ15_RS22440
subclass of: SO_0000673
so part of: NLZ15_RS22440
location: 12221..12730
location: region:12221-12730:1
so has part: feature:12221-12730:1:exon

WP_000455437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12221-12730:1:exon

NLZ15_RS22445
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22445
old locus tag: NLZ15_22445
so part of: sequence
location: 12963..13607
location: region:12963-13607:1
so has part: feature:12963-13607:1:exon
subclass of: SO_0000010

position:12963:1
position: 12963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13607:1
position: 13607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12963-13607:1:exon

NLZ15_RS22445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22445
old locus tag: NLZ15_22445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MLSTTAFAALALQCAASVHPDTAHEVARVESGFNPYAIAEIIPKVERKPGDKGVVSYFPKTKEAALQIVNQIESRNHRYSVGLMQITSTNFANFNTTAEKMFDPCENLKVSEQILVDCYKRGGDILRGLSCYYSGNPETGTKPESDFNNTSYIQRIGFNPPDNKKNWVVPSVKDAIRKENVTQSIKPKEVTVYPQYAMRGTVLDEKETNDVKTQ
SIO_010081: NLZ15_RS22445
subclass of: SO_0000673
so part of: NLZ15_RS22445
location: 12963..13607
location: region:12963-13607:1
so has part: feature:12963-13607:1:exon

WP_000953538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12963-13607:1:exon

NLZ15_RS22450
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22450
old locus tag: NLZ15_22450
so part of: sequence
location: 13591..13881
location: region:13591-13881:1
so has part: feature:13591-13881:1:exon
subclass of: SO_0000010

position:13591:1
position: 13591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13881:1
position: 13881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13591-13881:1:exon

NLZ15_RS22450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22450
old locus tag: NLZ15_22450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000916156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MLKLNKRYLTLSVFMAALMLCVAEPAFADDVSTKTTGFLQKIIDFLTDIRKPAITIIALVIGYIAIFSRQHAAWITPLIIGIIIFIVAPYLPDWLA
SIO_010081: NLZ15_RS22450
subclass of: SO_0000673
so part of: NLZ15_RS22450
location: 13591..13881
location: region:13591-13881:1
so has part: feature:13591-13881:1:exon

WP_000916156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13591-13881:1:exon

NLZ15_RS22455
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22455
old locus tag: NLZ15_22455
so part of: sequence
location: 13906..16659
location: region:13906-16659:1
so has part: feature:13906-16659:1:exon
subclass of: SO_0000010

position:13906:1
position: 13906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16659:1
position: 16659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13906-16659:1:exon

NLZ15_RS22455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22455
old locus tag: NLZ15_22455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016247738.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MSTVFKGLTRPALIRGLGVPLYPFLGMCVICVLLGVWIHEAMYALILPGWYAIKRVTKIDERFFDLLYLRMQIKGNPLANKRFNAVHYAGSSYDAVDISKVDNFMKLKDQSSLEELIPYSSHITDNLIVTRNHDLLATWQIDGAYFECVDEADLALLTDQLNTLIRSFDGKPVTFYTHRIRVRKEVRPVFDSKIPFVNRVMNDYYESLSAAEYFENKLYLTVCYKPFSAEDKVTHFLSRKKGNKNIFEEPINDMNEICGRLSTYLSRFHSRRLGLYEENNIVYSEQLTLFQKLLSGRWQKVRVTNSPFYTYLGGKDLFFGNDAGQITASDHARYFRCIEIKDYFQETDAGIFDALMYLPVEYVQTSSFTPIDKQSAIKALDDQIDKLEMTDDAAKSLLADLKVGLDMVSSGYISFGKSHQTLIVYADSPERLVKDTNIVTTTLEDLGLIVTYSTLSLGAAYFAQLPGNYTLRPRLSSISSLNFAEMESFHNFFTGKEKGNTWGNNLITLGGSGNDIYNLNYHMTTEHQNYFGKNPTLGHTEILGTSNVGKTVVMMTKAFAAQQFGTPESFPPERKLKKLTTVFFDKDRAAEPGIRSMGGAYFRVKEGEPTGWNPAALPPTKRNISFMKDLVRLLCTLNSEPLDDYQNRLISDAVERLMQRSNRSYPISKLRPLILEPDDTETRRHGLKARLNAWVQGGEFGWVFDNPDDTFDVDNLDVFGIDGTEFLDNKVLSSAASFYLIYRVTMLADGRRLLIYMDEFWQWINNEAFRDFVYNKLKTARKLDMVLVVATQSPDELIKSPIAAAVREQCATHIYLANPKAKRSEYVDELEVRELYFDKIKAIDPLSRQFLVVKNPQRKGESDDFAAFARLDLGKAAYYLPVLSASKPQLELFDEIWKEGMKPEEWLDTYLERANLI
SIO_010081: NLZ15_RS22455
subclass of: SO_0000673
so part of: NLZ15_RS22455
location: 13906..16659
location: region:13906-16659:1
so has part: feature:13906-16659:1:exon

WP_000108726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13906-16659:1:exon

NLZ15_RS22460
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22460
old locus tag: NLZ15_22460
so part of: sequence
location: 16669..17439
location: region:16669-17439:1
so has part: feature:16669-17439:1:exon
subclass of: SO_0000010

position:16669:1
position: 16669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17439:1
position: 17439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16669-17439:1:exon

NLZ15_RS22460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22460
old locus tag: NLZ15_22460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549917.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKKHIVAALIASVTVISGAQAGVPVAIDANPEWAVEAQRWTERLKQWQDTVNHYQKQINAYKQELLTKTGIRDVQGLVQSAQSVSKELENIYDQGNSFIDDYIKNPEATLSEQARSLLADYKVTNTCKGLGYTGDLVRGCEASFLSQLAGIEYGNKLESKLREDNQEMADLIDQVKNAQDTKATQDATNAVSLASLKFNKLKFQYEMYRDKQRDLAEYKEKMLQAAFQEKQLGAVNKETPVVDYKAAFEQQSYEMN
SIO_010081: NLZ15_RS22460
subclass of: SO_0000673
so part of: NLZ15_RS22460
location: 16669..17439
location: region:16669-17439:1
so has part: feature:16669-17439:1:exon

WP_000716326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16669-17439:1:exon

NLZ15_RS22465
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22465
old locus tag: NLZ15_22465
so part of: sequence
location: 17449..17706
location: region:17449-17706:1
so has part: feature:17449-17706:1:exon
subclass of: SO_0000010

position:17449:1
position: 17449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17706:1
position: 17706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17449-17706:1:exon

NLZ15_RS22465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22465
old locus tag: NLZ15_22465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000759841.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EexN family lipoprotein
translation: MKKYGLVAALGLTFFLTGCEEVKSVDWWQSHVDDATKKVAECKKSGSDSENCKNAKEGLFRYKQLHPKHVDYKDAFKNVLGKDGS
SIO_010081: NLZ15_RS22465
subclass of: SO_0000673
so part of: NLZ15_RS22465
location: 17449..17706
location: region:17449-17706:1
so has part: feature:17449-17706:1:exon

WP_000759841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17449-17706:1:exon

NLZ15_RS22470
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22470
old locus tag: NLZ15_22470
pseudo: true
so part of: sequence
location: 17718..18774
location: region:17718-18774:1
so has part: feature:17718-18774:1:exon
subclass of: SO_0000010

position:17718:1
position: 17718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18774:1
position: 18774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17718-18774:1:exon

NLZ15_RS22470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22470
old locus tag: NLZ15_22470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549919.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type IV secretion system protein
SIO_010081: NLZ15_RS22470
subclass of: SO_0000673
so part of: NLZ15_RS22470
location: 17718..18774
location: region:17718-18774:1
so has part: feature:17718-18774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17718-18774:1:exon

NLZ15_RS22475
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22475
old locus tag: NLZ15_22475
so part of: sequence
location: 18969..19697
location: region:18969-19697:1
so has part: feature:18969-19697:1:exon
subclass of: SO_0000010

position:18969:1
position: 18969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19697:1
position: 19697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18969-19697:1:exon

NLZ15_RS22475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22475
old locus tag: NLZ15_22475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004199085.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MGFKLSGLKLPGFNKKKEVTDSSTTFEEKNVLMQEKMNRIYKFGGIAGIAVGVLSLLALNGALPLKSTVVEAYLINGVTGVAERLTSVKKENLSENEALAKYFITQYVKRREGYNYFSLQHDYDYVLLYSAENVATDYNALINGNQSPKVIYNKAEKTASVQDNPSVIISPSSRRDDKDMGAYIRFKLTIRNVATGQDDYEYWNVRLTYRIEPQVEMASGDRNNNPLKFVVTSYVRDKEVKG
SIO_010081: NLZ15_RS22475
subclass of: SO_0000673
so part of: NLZ15_RS22475
location: 18969..19697
location: region:18969-19697:1
so has part: feature:18969-19697:1:exon

WP_004199085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18969-19697:1:exon

NLZ15_RS22480
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22480
old locus tag: NLZ15_22480
so part of: sequence
location: 19703..20632
location: region:19703-20632:1
so has part: feature:19703-20632:1:exon
subclass of: SO_0000010

position:19703:1
position: 19703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20632:1
position: 20632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19703-20632:1:exon

NLZ15_RS22480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22480
old locus tag: NLZ15_22480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000783379.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MKMNKGALIVALLLVSHVCHAAVTPAASRFDPRNQIVSYNPQNTTVINSAVGYTTTLVFDEDETVISARTGFPQGWEVNKEDNLVYLEVKPVKQTVQKNSTDDNGNQSSEVVSVALDPENDLERWRTNLFVRTTKRNYSMELNARTFRQPDKIAFVVNYQYPQERRKEQAEIEKKRIEALNKRQEEQAINRSLENAKSPKNWDYWKRVADGSQSISPDYAYDDGRYTWFGFSPLKKIPSVFVMSGEQETLTNPVVKNSGSFTVVGVPVDQRFVLRMGNQVVGVENRGFGKVRLPAGDTVSPNVEKEVIQ
SIO_010081: NLZ15_RS22480
subclass of: SO_0000673
so part of: NLZ15_RS22480
location: 19703..20632
location: region:19703-20632:1
so has part: feature:19703-20632:1:exon

WP_000783386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19703-20632:1:exon

NLZ15_RS22485
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
gene: virB10
locus tag: NLZ15_RS22485
old locus tag: NLZ15_22485
so part of: sequence
location: 20629..21843
location: region:20629-21843:1
so has part: feature:20629-21843:1:exon
subclass of: SO_0000010

position:20629:1
position: 20629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21843:1
position: 21843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20629-21843:1:exon

NLZ15_RS22485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
gene: virB10
locus tag: NLZ15_RS22485
old locus tag: NLZ15_22485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001295060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB10/TraB/TrbI family type IV secretion system protein
translation: MSEQENKIPTAVEIEQALRERHQKEIEQNDKTDKGDEDDGKSVKRLGIEKLKKSRKGLVIIVAAFLLLAAGVSVYYIPSIIRAMSSGDDKPASNAVSTGSVKRATGLSDDVDPFNTREEPAKTEERKESSGKAETPPEKVQQNFSRALDVAYGGSSSASSNSGGSSSTASNTRNEGDGSDKQAEVQPVNAGQPAQLSKITRVPYDPNLFIPENTAIKCSLDRRFISDLAGKLVCTINEDVYSANRNVKLIEKGTAAYLMYKTGTFNHGQGAVFIAATKLRTRKEPFIDIPLIDTQAAGALGEAGASGWIDTHFADRFMGAMMVGMIPDVAQAASGAAKSNKDNQTDYTANSRQAFADIAREAFANSVNIPPTLYKNQGEIITLIVGQDLDFSSIYKLKMVGTRR
SIO_010081: NLZ15_RS22485
subclass of: SO_0000673
so part of: NLZ15_RS22485
location: 20629..21843
location: region:20629-21843:1
so has part: feature:20629-21843:1:exon

WP_001295060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20629-21843:1:exon

NLZ15_RS22490
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22490
old locus tag: NLZ15_22490
so part of: sequence
location: 21845..22042
location: region:21845-22042:1
so has part: feature:21845-22042:1:exon
subclass of: SO_0000010

position:21845:1
position: 21845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22042:1
position: 22042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21845-22042:1:exon

NLZ15_RS22490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22490
old locus tag: NLZ15_22490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000629109.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MITLDIKEFSMLLGIRESEIYHHIRKGIPINGVPFPKPLKQIKTHRFNYEEVMRFIEDLKGKGEL
SIO_010081: NLZ15_RS22490
subclass of: SO_0000673
so part of: NLZ15_RS22490
location: 21845..22042
location: region:21845-22042:1
so has part: feature:21845-22042:1:exon

WP_000629109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21845-22042:1:exon

NLZ15_RS22495
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
gene: virB11
locus tag: NLZ15_RS22495
old locus tag: NLZ15_22495
so part of: sequence
location: 22039..23073
location: region:22039-23073:1
so has part: feature:22039-23073:1:exon
subclass of: SO_0000010

position:22039:1
position: 22039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23073:1
position: 23073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22039-23073:1:exon

NLZ15_RS22495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
gene: virB11
locus tag: NLZ15_RS22495
old locus tag: NLZ15_22495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549925.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MKDAENRHIVYEIIDEYFHHWLNEVDGLTEIAVNRPDELFVKVSGKWQQHELKMDFKDCMSFAGAISDYHDGGSVTPEYPLRSVTLPGGERVQIVIPPATERETVSITIRKPSSVFIDHDTFVKQGFYSRLNQGGKFRDKEDELSSMFKDNCFEQFVPECLVKGKTMVFCAGTGAGKTTFANACLQYIPHHLRCISIEDTDEAKFRFHKNHVKLYYPSEGESSTVSSASLLRSGFRMNPDRILMTEVRGAEAWDFLKGSSSGHAGNLTTVHESTPEDAVLGLVQRCYMNPECQNLPYNIILRRVLSNVDVIMSIKYIDEEDNRFASGIYYRDIHFQEYFEKLKE
SIO_010081: NLZ15_RS22495
subclass of: SO_0000673
so part of: NLZ15_RS22495
location: 22039..23073
location: region:22039-23073:1
so has part: feature:22039-23073:1:exon

WP_000650512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22039-23073:1:exon

NLZ15_RS22500
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22500
old locus tag: NLZ15_22500
so part of: sequence
location: 23076..24911
location: region:23076-24911:1
so has part: feature:23076-24911:1:exon
subclass of: SO_0000010

position:23076:1
position: 23076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24911:1
position: 24911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23076-24911:1:exon

NLZ15_RS22500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22500
old locus tag: NLZ15_22500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000053816.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MSLKLPDKGQWAFIGLVMCLVTYYTGSVAVYFLNGKTPLYIWKNFDSMLLWRIITESNIRTDIRLTAIPSLLSGMVSSLIVPVFIIWQLNKTDVALYGDAKFASDNDLRKSKLLKWEKENDTDILVGAYKGKYLWYTAPDFVSLGAGTRAGKGAAIGIPNLLVRKHSLIALDPKQELWKITSKVREKLLGNKVYLLDPFNSKTHQFNPLFYIDLKEESGAKDLLKLIEILFPSYGLTGAEAHFNNLAGQYWTGLAKLLHFFINYDPSWLGEFGLKPVFSIGSVVELYSNIDRELILSKREDLEGTKGLDENALYHLRDALTKIREYHETEDEQRSSIDGSFRKKMSLFYLPTVRKCTDGNDFDLRQLRREDITVYVGVNAEDMSLAYDFLNLFFNFVVEVTLRENPDFDPTLKHDCLMFLDEFPSIGYMPIIKKGSGYIAGFKLKLLTIYQNISQLNEIYGVEGAKTLMSAHPCRIIYAVSEEDDAKKISEKLGYITTKSTGSSKTSGRSTSKSSSESEAQRALVLPQELGTLDFKEEFIILKGENPVKAEKALYFLDPYFMDRLMMVSPKLTELTASLNKTKKVLGVKGLKYPSKEKMLSVGELESEVLL
SIO_010081: NLZ15_RS22500
subclass of: SO_0000673
so part of: NLZ15_RS22500
location: 23076..24911
location: region:23076-24911:1
so has part: feature:23076-24911:1:exon

WP_254489106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23076-24911:1:exon

NLZ15_RS22505
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22505
old locus tag: NLZ15_22505
so part of: sequence
location: 24908..25300
location: region:24908-25300:1
so has part: feature:24908-25300:1:exon
subclass of: SO_0000010

position:24908:1
position: 24908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25300:1
position: 25300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24908-25300:1:exon

NLZ15_RS22505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22505
old locus tag: NLZ15_22505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000738524.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cag pathogenicity island Cag12 family protein
translation: MKKMLMVSVLFLSACSSPPEPPQVDWEQNPETVNTQLMDWQPTYSVIKSDKVNSSWVKVIHNFRPENRLYDDAVFYSVAHSDSVIVETSNGTDFFTAKNWLRANGANGVIQYRYKMNCFSCRTTSVYLSR
SIO_010081: NLZ15_RS22505
subclass of: SO_0000673
so part of: NLZ15_RS22505
location: 24908..25300
location: region:24908-25300:1
so has part: feature:24908-25300:1:exon

WP_000738524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24908-25300:1:exon

NLZ15_RS22510
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22510
old locus tag: NLZ15_22510
so part of: sequence
location: 25388..25702
location: region:25388-25702:1
so has part: feature:25388-25702:1:exon
subclass of: SO_0000010

position:25388:1
position: 25388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25702:1
position: 25702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25388-25702:1:exon

NLZ15_RS22510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22510
old locus tag: NLZ15_22510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000754496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKTVTTAVLLCAFAAGTAHAEEKADPNDPCAMVLCLAGKLDGSSPAECDPMYKSFMSIRKKNKHGFLPDHTADARKKKLNECPAADAGTVSKIISSFGRLKNF
SIO_010081: NLZ15_RS22510
subclass of: SO_0000673
so part of: NLZ15_RS22510
location: 25388..25702
location: region:25388-25702:1
so has part: feature:25388-25702:1:exon

WP_000754496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25388-25702:1:exon

NLZ15_RS22515
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22515
old locus tag: NLZ15_22515
so part of: sequence
location: 25788..26114
location: region:25788-26114:1
so has part: feature:25788-26114:1:exon
subclass of: SO_0000010

position:25788:1
position: 25788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26114:1
position: 26114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25788-26114:1:exon

NLZ15_RS22515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22515
old locus tag: NLZ15_22515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004208538.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIINVPDARSVRIAGIEIIDSVKSVASVFTEILLFMVWFPAIVYGLYRFVIVLWDASLKPQSLIEFINFMVELYSYVLPSLAVIAVALVVVLSIFKRLSAIWEGRKQ
SIO_010081: NLZ15_RS22515
subclass of: SO_0000673
so part of: NLZ15_RS22515
location: 25788..26114
location: region:25788-26114:1
so has part: feature:25788-26114:1:exon

WP_004208538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25788-26114:1:exon

NLZ15_RS22520
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22520
old locus tag: NLZ15_22520
so part of: sequence
location: 26111..26605
location: region:26111-26605:1
so has part: feature:26111-26605:1:exon
subclass of: SO_0000010

position:26111:1
position: 26111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26605:1
position: 26605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26111-26605:1:exon

NLZ15_RS22520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22520
old locus tag: NLZ15_22520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001215543.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MRHFFNVLSFAVALLPATLCAAQIQGKVIRVLDGDTIEVKTLPAKIVVYEVPIRVRLINIDAPEKKQPFGRWSTNQLKALLAGQSVTVSYTQTDRYGRVLGRVVTANGTEANRQQVLKGAAWVYDRYNTDNSLPALQREAQTQKRGLWADSNPVPPWEWRHKQN
SIO_010081: NLZ15_RS22520
subclass of: SO_0000673
so part of: NLZ15_RS22520
location: 26111..26605
location: region:26111-26605:1
so has part: feature:26111-26605:1:exon

WP_001215543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26111-26605:1:exon

NLZ15_RS22525
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22525
old locus tag: NLZ15_22525
so part of: sequence
location: 26688..27950
location: region:26688-27950:1
so has part: feature:26688-27950:1:exon
subclass of: SO_0000010

position:26688:1
position: 26688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27950:1
position: 27950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26688-27950:1:exon

NLZ15_RS22525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22525
old locus tag: NLZ15_22525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000517490.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MGKLTLVEQALRLHKEYYGEDNFGTVVKDCDYYPKVAEIFINRKNRKIYSNLDIEPVASTVVHTGSSPVMAKAGRIKKLMFKDGSGAYRIHLGQNEVVHIIRFILNSKVRMEYAVGTTKSMSMLHNLCEAGRAKLNRSLPRKGIWKIGCYDGVYYHGKARKEEIENALRFSVHPKFNELENDFNQFFSDIDFYTRYGQSGMRKVLFTGPPGTGKTTIAKALGAKYQDKYVFVYADDYFKDVCYAAAQKKIPVIIIAEEVDELYRADAGTLSFLDGADTPRNLAGTYVIFSTNYPNRIDPRIRKRPGRIDRIISVGAFRTKAAAACAKMYLPDDINIDLKELGAVLDRTTPAEIKEIINIAIGMIRGTKNELTVDVIKNARAFLKGTLDLSVQEAEEDIEEREEIFKKNGAQPDYSSYLED
SIO_010081: NLZ15_RS22525
subclass of: SO_0000673
so part of: NLZ15_RS22525
location: 26688..27950
location: region:26688-27950:1
so has part: feature:26688-27950:1:exon

WP_000517490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26688-27950:1:exon

NLZ15_RS22530
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
gene: topB
locus tag: NLZ15_RS22530
old locus tag: NLZ15_22530
so part of: sequence
location: 27954..30281
location: region:27954-30281:1
so has part: feature:27954-30281:1:exon
subclass of: SO_0000010

position:27954:1
position: 27954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30281:1
position: 30281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27954-30281:1:exon

NLZ15_RS22530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
gene: topB
locus tag: NLZ15_RS22530
old locus tag: NLZ15_22530
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549937.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IA DNA topoisomerase
translation: MRLFIAEKPSLAKAIFEGLGGNPNTEKKNGYFEHGSDVVTWCYGHMLELYDPQDYDDKYSNWRYSDLPIKAVYPPKYKIKPESEAQTRIILSLIDKADSIVHSGDPDDEGCLLVDEILGYAGNKKPVQRLLVADLNLAPVQKSLSNLQPNDKFRGMTLSALARSLCDQGFGYNMTRGCTLKGREKGYDGVLNVGRVQSAVLGLVNMRTLANQNHTESFYYDVFASLSMNGHQIKAKYQTTDDDQIDEKKRLISEAQAAHIAGRVTGKDAIVTIATTKPENSKPPLPLNLSTLQQLCAKRFGYSAKDTLDVMQGLYETHKLLTYPRSDNRYLSDEHYYQAGDIATAIAATVPELASAIVDMDKGQKHKAFNASKIEAHHAIIPTTKSGAGIQLNEKERNVYNLVSVYFIGLFYPDAIRNKTKIHFDIKGDTFTATQSVLVQKGWEALGKDSDDEDETEDAGTDGFDLSLLKFNDSGLCESADVDKKKTTPPRYFTESTLLAAMTSAAKFIDDPALRKALEAKDEGSSDRGSIGTEATRAGILEKLAANTGLISIEKEKGYSELVWKTTKQGQEFCAALPPEITKPDISALWAEKQSQIKAGELTVEEFIKENDEYVQGLIDELDRNGISISSNATPCPVCNNGFLRKRKGQNGFFWGCSCYPECKTTFPDKDGKPDMEAKSRSEGSMSRLEAPCPSCSKEIIIRPKGFFCSGCEFKIWSEVSGKKLTQNQVETLIKKGKTGEIKGFTSNKTGKKFDAAIVLQDKTTGKLGFQFSKK
SIO_010081: NLZ15_RS22530
subclass of: SO_0000673
so part of: NLZ15_RS22530
location: 27954..30281
location: region:27954-30281:1
so has part: feature:27954-30281:1:exon

WP_004199098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27954-30281:1:exon

NLZ15_RS22535
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22535
old locus tag: NLZ15_22535
so part of: sequence
location: 30293..30748
location: region:30293-30748:1
so has part: feature:30293-30748:1:exon
subclass of: SO_0000010

position:30293:1
position: 30293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30748:1
position: 30748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30293-30748:1:exon

NLZ15_RS22535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22535
old locus tag: NLZ15_22535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549938.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS family nucleoid-associated regulatory protein
translation: MSENETFDATKKLLLNIRSVRVFARETSFEQLLEMQEKLNAVIEERREEAEREAAERAERERKRQELLQLIAGEGFSPEELLGLSEDAQKTRKKTLPKAPPKYQFDENGETKYWSGRGRTPKPIDEALKAGRSLDEFLIKKDASSTAGDEQ
SIO_010081: NLZ15_RS22535
subclass of: SO_0000673
so part of: NLZ15_RS22535
location: 30293..30748
location: region:30293-30748:1
so has part: feature:30293-30748:1:exon

WP_001293458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30293-30748:1:exon

NLZ15_RS22540
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22540
old locus tag: NLZ15_22540
so part of: sequence
location: complement(30786..31190)
location: region:30786-31190:-1
so has part: feature:30786-31190:-1:exon
subclass of: SO_0000010

position:30786:-1
position: 30786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31190:-1
position: 31190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30786-31190:-1:exon

NLZ15_RS22540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22540
old locus tag: NLZ15_22540
inference: COORDINATES: protein motif:HMM:NF015639.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YkgJ family cysteine cluster protein
translation: MDVHLTALEATHIAQASKLTARDNPLTTGHESKCPFLSEKGTCSIYNYRPLLCRTYHVLTPPEMCNDLDAQVMQYGSQSANMGNHIYKTIAEWIYFQTYHCTGKLETKDIRDYFPYPREDIQRFLHHNPPRPFC
SIO_010081: NLZ15_RS22540
subclass of: SO_0000673
so part of: NLZ15_RS22540
location: complement(30786..31190)
location: region:30786-31190:-1
so has part: feature:30786-31190:-1:exon

WP_228286362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30786-31190:-1:exon

NLZ15_RS22545
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22545
old locus tag: NLZ15_22545
so part of: sequence
location: 31341..32554
location: region:31341-32554:1
so has part: feature:31341-32554:1:exon
subclass of: SO_0000010

position:31341:1
position: 31341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32554:1
position: 32554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31341-32554:1:exon

NLZ15_RS22545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22545
old locus tag: NLZ15_22545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558238.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTKNTRFSPEVRQRAVRMVLESQSEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFGEGGVRPPLEKVMPLLDKLRKLYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA
SIO_010081: NLZ15_RS22545
subclass of: SO_0000673
so part of: NLZ15_RS22545
location: join(31341..31632,31632..32554)
location: region:31341-32554:1
so has part: feature:31341-31632:1:exon
so has part: feature:31632-32554:1:exon

WP_162886171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31341-31632:1:exon

position:31632:1
position: 31632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31632-32554:1:exon

NLZ15_RS22545
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 255519
locus tag: NLZ15_RS22545
old locus tag: NLZ15_22545
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.4
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: NLZ15_RS22545
subclass of: SO_0000673
so part of: NLZ15_RS22545
location: 31622..31738
location: region:31622-31738:1
so has part: feature:31622-31738:1:exon

position:31622:1
position: 31622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31738:1
position: 31738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31622-31738:1:exon

NLZ15_RS22550
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
gene: istA
locus tag: NLZ15_RS22550
old locus tag: NLZ15_22550
so part of: sequence
location: 33064..34599
location: region:33064-34599:1
so has part: feature:33064-34599:1:exon
subclass of: SO_0000010

position:33064:1
position: 33064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34599:1
position: 34599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33064-34599:1:exon

NLZ15_RS22550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
gene: istA
locus tag: NLZ15_RS22550
old locus tag: NLZ15_22550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000447023.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: METCFKILQLKFDKKLTNRCIGLTLHISASTVFEVLARFKASSLSWPLPADISHDTLEKLIFPPKDTFASELVMPDMLYLDTEMRKPGVTRQLLWMEYKAQAGNKAMGYSHFCRCYREWKKTRRLSMRQEHRAGEKLFIDFCGPTVPVINPDTGEIRRVAIFVAVMGASNYTYVEACEGQDMMSWLNAHSRCLTFLGGVPKLLIPDNLRSAVKKADRYEPVINDSYQALAEHYGTVIIPARPRKPKDKPKAENGVLIVERWLLARIRNETFHTLRALNARLRELLTDMNNRPMKGYGNQTRAERFRILDAPALSPLPLAPYEYTEYKAVKVGPDYHVEYARHWYSVPHELVGQRLSLKAGQSVVQLWHKGQCVAQHPRSTHEYKHTTNPLHMPERHRQHGTWTPERLIEQGKRTGPSTGRVVESMLKAKPHPELAYRAVLGLLALQKKYGPERLEKACYVALHYNAPDRRFIDNLLRHHRENLELPLSRQGEQHPAYASEHENLRGPGYYH
SIO_010081: NLZ15_RS22550
subclass of: SO_0000673
so part of: NLZ15_RS22550
location: 33064..34599
location: region:33064-34599:1
so has part: feature:33064-34599:1:exon

WP_023181050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33064-34599:1:exon

NLZ15_RS22555
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
gene: istB
locus tag: NLZ15_RS22555
old locus tag: NLZ15_22555
so part of: sequence
location: 34616..35371
location: region:34616-35371:1
so has part: feature:34616-35371:1:exon
subclass of: SO_0000010

position:34616:1
position: 34616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35371:1
position: 35371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34616-35371:1:exon

NLZ15_RS22555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
gene: istB
locus tag: NLZ15_RS22555
old locus tag: NLZ15_22555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001282653.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element ISSso4 family helper ATPase IstB
translation: MSDNLLNKLTQLKLPAMAGSLIRQRETPQTYDELSFEERLTLLVDDELLSRENSRVARLRKNAGLKYQATPEGLRYPASRGLRAEQMRELLNGHYITHRKNLLITGPTGCGKSWIANALGEQACRQKHSVRYCRTGRLLEQLAQGRVDGSWLKYLKQLQKIQVLILDDLGLEQLSNAQCNDLLELIEDRYGQSSTIVVSQFPVDKWHGLMENPTTADAILDRLVHNSHRVVLQGESLRKNPPVVESSEKTR
SIO_010081: NLZ15_RS22555
subclass of: SO_0000673
so part of: NLZ15_RS22555
location: 34616..35371
location: region:34616-35371:1
so has part: feature:34616-35371:1:exon

WP_001282653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34616-35371:1:exon

NLZ15_RS22560
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22560
old locus tag: NLZ15_22560
so part of: sequence
location: 35665..35844
location: region:35665-35844:1
so has part: feature:35665-35844:1:exon
subclass of: SO_0000010

position:35665:1
position: 35665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35844:1
position: 35844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35665-35844:1:exon

NLZ15_RS22560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22560
old locus tag: NLZ15_22560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000136657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEKITDEELADLLEALKRAHGMGVCSKAVKLAQRCADVFPAIVAELQEYRNAAKRTSA
SIO_010081: NLZ15_RS22560
subclass of: SO_0000673
so part of: NLZ15_RS22560
location: 35665..35844
location: region:35665-35844:1
so has part: feature:35665-35844:1:exon

WP_000136657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35665-35844:1:exon

NLZ15_RS22565
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22565
old locus tag: NLZ15_22565
so part of: sequence
location: 35841..36662
location: region:35841-36662:1
so has part: feature:35841-36662:1:exon
subclass of: SO_0000010

position:35841:1
position: 35841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36662:1
position: 36662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35841-36662:1:exon

NLZ15_RS22565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22565
old locus tag: NLZ15_22565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000196235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT-like domain-containing protein
translation: MTRATERAYSELQQAFDFYNQRLFDGELPDCLITFQRGKNTMGYFSYRRFVAADGSGRMIDEIALNPEYFPVYPLIEVMQTLVHEQCHMWQYHYGNPSRKTYHNAQWAAKMESIGLMPSSTGRPGGAKVGQKINDYPIPGGRFQRVTLELFQGQFALSWFDRFPVQVEQQKDMTAVIEQWRETLALAHQNAEAGIDIEAVLSMALLPSVSPQNGSHSDDMAGSNDNDLSVAAFEDKPKRNKVKYQCRGCGAAVWGKAGLNIECGDCELAFIEN
SIO_010081: NLZ15_RS22565
subclass of: SO_0000673
so part of: NLZ15_RS22565
location: 35841..36662
location: region:35841-36662:1
so has part: feature:35841-36662:1:exon

WP_000196235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35841-36662:1:exon

NLZ15_RS22570
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22570
old locus tag: NLZ15_22570
so part of: sequence
location: 36772..37026
location: region:36772-37026:1
so has part: feature:36772-37026:1:exon
subclass of: SO_0000010

position:36772:1
position: 36772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37026:1
position: 37026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36772-37026:1:exon

NLZ15_RS22570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22570
old locus tag: NLZ15_22570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000510385.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGHYTIRTNDDEDQAIKKAQEATGQASASKTFMTAILELQRNRDEMAQLRRELAQEKARSQELVSSVKQFRSSLNNLFDLADNP
SIO_010081: NLZ15_RS22570
subclass of: SO_0000673
so part of: NLZ15_RS22570
location: 36772..37026
location: region:36772-37026:1
so has part: feature:36772-37026:1:exon

WP_000510385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36772-37026:1:exon

NLZ15_RS22575
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22575
old locus tag: NLZ15_22575
so part of: sequence
location: 37044..37319
location: region:37044-37319:1
so has part: feature:37044-37319:1:exon
subclass of: SO_0000010

position:37044:1
position: 37044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37319:1
position: 37319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37044-37319:1:exon

NLZ15_RS22575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22575
old locus tag: NLZ15_22575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000557557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTTNAIILCLVSYPCIVAWVIYKNRFVDYLFLTLLACLGSIFSVVLYKQPDYSLTIYQAVAVGYAAVIMPTVLVLSVVNIFMGKAERTCK
SIO_010081: NLZ15_RS22575
subclass of: SO_0000673
so part of: NLZ15_RS22575
location: 37044..37319
location: region:37044-37319:1
so has part: feature:37044-37319:1:exon

WP_000557557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37044-37319:1:exon

NLZ15_RS22580
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22580
old locus tag: NLZ15_22580
so part of: sequence
location: 37316..37594
location: region:37316-37594:1
so has part: feature:37316-37594:1:exon
subclass of: SO_0000010

position:37316:1
position: 37316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37594:1
position: 37594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37316-37594:1:exon

NLZ15_RS22580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22580
old locus tag: NLZ15_22580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001093608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTLAALENTFRDMRKHGCQTVMVTQSLADFGRYSYKPRPAFQDWIERLKTGERLPRGRYFVGKKPGGRLVLIDELGGTWTEKVTVIHTNAG
SIO_010081: NLZ15_RS22580
subclass of: SO_0000673
so part of: NLZ15_RS22580
location: 37316..37594
location: region:37316-37594:1
so has part: feature:37316-37594:1:exon

WP_001093608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37316-37594:1:exon

NLZ15_RS22780
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
gene: dqlB
locus tag: NLZ15_RS22780
so part of: sequence
location: 38399..38494
location: region:38399-38494:1
so has part: feature:38399-38494:1:exon
subclass of: SO_0000010

position:38399:1
position: 38399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38494:1
position: 38494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38399-38494:1:exon

NLZ15_RS22780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
gene: dqlB
locus tag: NLZ15_RS22780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000609149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DinQ-like type I toxin DqlB
translation: MINLLIIVLRAVAALANALIAILELIRQFID
SIO_010081: NLZ15_RS22780
subclass of: SO_0000673
so part of: NLZ15_RS22780
location: 38399..38494
location: region:38399-38494:1
so has part: feature:38399-38494:1:exon

WP_000609145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38399-38494:1:exon

NLZ15_RS22585
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22585
old locus tag: NLZ15_22585
so part of: sequence
location: complement(38712..40103)
location: region:38712-40103:-1
so has part: feature:38712-40103:-1:exon
subclass of: SO_0000010

position:38712:-1
position: 38712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40103:-1
position: 40103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38712-40103:-1:exon

NLZ15_RS22585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22585
old locus tag: NLZ15_22585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001493761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISKra4-like element ISKpn19 family transposase
translation: MQLTLQIVITDESGSSRTEELMTIQKSGETRNDIGLSVSESKLLLNTVQQSVVQLQADEYTQHHIRCPHCLAARRIKGKQKIRYRTLFGVIPVSGLRVYRCRCEESDTKTVSLLSDWAGDYSHPALKYIETRWASMISYEMTTRLLKDILPVGHSLNASTVRNHLCQVAQRLDAEAEAHSGFLSGCPRDWGNLPRPGKPLVVGIDGGYVRDRDDKKRNFEIIAGKSFSVGAPADTRRFGFVQKDDCHPERRLMTHLSAQGMQANQQIFFLSDGADNLRDLQFGMYPESTHVLDWFHITMRLTVLMQYARGLLVSDPEAGSKVLALLESIKRYLWHGNVVAALEHIDNCVMYCDDPELSYPSLKSLQKHLDEMYTYIRNNKMMIPNYGEMRRYGEPVSTAFVESTINEVIARRMAKKQQMQWSRKGAHYLLQTRTAVLNNELQDKFVCWYPGFQSDGKGPAMAA
SIO_010081: NLZ15_RS22585
subclass of: SO_0000673
so part of: NLZ15_RS22585
location: complement(38712..40103)
location: region:38712-40103:-1
so has part: feature:38712-40103:-1:exon

WP_014839878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38712-40103:-1:exon

NLZ15_RS22590
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22590
old locus tag: NLZ15_22590
so part of: sequence
location: complement(40140..40712)
location: region:40140-40712:-1
so has part: feature:40140-40712:-1:exon
subclass of: SO_0000010

position:40140:-1
position: 40140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40712:-1
position: 40712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40140-40712:-1:exon

NLZ15_RS22590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22590
old locus tag: NLZ15_22590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001493762.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MQYAYIRVSSADQNTARQEEALSKAGFQPDKICVEHASAKDTNRPGLQELLGQLRPGDTLLVHSIDRLCRNMSDMCAVTTRLRDQGVTLIFLKEQLTFSAGTNNPMQELQLHMMSAFSQFERALLKERQADGIAAKKARGEKTGRPGADIKKIQEIDALRSRGVRLRIACDHAGLGVSTYYKLRHQMNNQ
SIO_010081: NLZ15_RS22590
subclass of: SO_0000673
so part of: NLZ15_RS22590
location: complement(40140..40712)
location: region:40140-40712:-1
so has part: feature:40140-40712:-1:exon

WP_001493762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40140-40712:-1:exon

NLZ15_RS22595
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22595
old locus tag: NLZ15_22595
so part of: sequence
location: complement(40849..41394)
location: region:40849-41394:-1
so has part: feature:40849-41394:-1:exon
subclass of: SO_0000010

position:40849:-1
position: 40849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41394:-1
position: 41394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40849-41394:-1:exon

NLZ15_RS22595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22595
old locus tag: NLZ15_22595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001493763.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid pRiA4b ORF-3 family protein
translation: MVWRRLRIAADTSLVALHFIFQIVQGWGDDHLHQFHIYGKDYGISYEGGIGFVDNPFRVVIDDFAFDAGDRFTYEYNFFEHWLHDIRVEAIYENSTLKAPFCISGHGMPGATAADEFDKTLAFLEAIVNADDETTVGEIRPFADDLDAVRFNRHKINRQLSRLDLASPVLEPEVIWLGRRR
SIO_010081: NLZ15_RS22595
subclass of: SO_0000673
so part of: NLZ15_RS22595
location: complement(40849..41394)
location: region:40849-41394:-1
so has part: feature:40849-41394:-1:exon

WP_249960467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40849-41394:-1:exon

NLZ15_RS22600
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22600
old locus tag: NLZ15_22600
pseudo: true
so part of: sequence
location: complement(<41530..41712)
location: region:41530-41712:-1
so has part: feature:41530-41712:-1:exon
subclass of: SO_0000010

position:41530:-1
position: 41530
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:41712:-1
position: 41712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41530-41712:-1:exon

NLZ15_RS22600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22600
old locus tag: NLZ15_22600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015060658.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4158 domain-containing protein
SIO_010081: NLZ15_RS22600
subclass of: SO_0000673
so part of: NLZ15_RS22600
location: complement(<41530..41712)
location: region:41530-41712:-1
so has part: feature:41530-41712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41530-41712:-1:exon

NLZ15_RS22605
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22605
old locus tag: NLZ15_22605
so part of: sequence
location: 41874..42488
location: region:41874-42488:1
so has part: feature:41874-42488:1:exon
subclass of: SO_0000010

position:41874:1
position: 41874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42488:1
position: 42488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41874-42488:1:exon

NLZ15_RS22605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22605
old locus tag: NLZ15_22605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017412822.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MFIGYIRMSKADGSQTNDLQRDALIAAGVDAAHFYEDRASGKREERPGLTACLKALRPGDTLVVWKLDRLGRDLRHLINTVHDLTARGTGLKVLTGHGATIDTTTAAGKLVFGIFAALAEFERELIAERTTAGLASARARGRNGGRPYKMTPVKLRLAMASMGQSETKVSTLCQELGITRQTLYRHISPVGQLRADGIKLFNRG
SIO_010081: NLZ15_RS22605
subclass of: SO_0000673
so part of: NLZ15_RS22605
location: 41874..42488
location: region:41874-42488:1
so has part: feature:41874-42488:1:exon

WP_014839983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41874-42488:1:exon

NLZ15_RS22610
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22610
old locus tag: NLZ15_22610
so part of: sequence
location: complement(42807..43463)
location: region:42807-43463:-1
so has part: feature:42807-43463:-1:exon
subclass of: SO_0000010

position:42807:-1
position: 42807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43463:-1
position: 43463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42807-43463:-1:exon

NLZ15_RS22610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22610
old locus tag: NLZ15_22610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001516695.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quinolone resistance pentapeptide repeat protein QnrS1
translation: METYNHTYRHHNFSHKDLSDLTFTACTFIRSDFRRANLRDTTFVNCKFIEQGDIEGCHFDVADLRDASFQQCQLAMANFSNANCYGIEFRACDLKGANFSRTNFAHQVSNRMYFCSAFISGCNLSYANMERVCLEKCELFENRWIGTNLAGASLKESDLSRGVFSEDVWGQFSLQGANLCHAELDGLDPRKVDTSGIKIAAWQQELILEALGIVVYPD
SIO_010081: NLZ15_RS22610
subclass of: SO_0000673
so part of: NLZ15_RS22610
location: complement(42807..43463)
location: region:42807-43463:-1
so has part: feature:42807-43463:-1:exon

WP_001516695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42807-43463:-1:exon

NLZ15_RS22615
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22615
old locus tag: NLZ15_22615
so part of: sequence
location: complement(43968..44672)
location: region:43968-44672:-1
so has part: feature:43968-44672:-1:exon
subclass of: SO_0000010

position:43968:-1
position: 43968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44672:-1
position: 44672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43968-44672:-1:exon

NLZ15_RS22615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22615
old locus tag: NLZ15_22615
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS26 family transposase
translation: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
SIO_010081: NLZ15_RS22615
subclass of: SO_0000673
so part of: NLZ15_RS22615
location: complement(43968..44672)
location: region:43968-44672:-1
so has part: feature:43968-44672:-1:exon

WP_001067855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43968-44672:-1:exon

NLZ15_RS22620
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22620
old locus tag: NLZ15_22620
pseudo: true
so part of: sequence
location: complement(<44737..44916)
location: region:44737-44916:-1
so has part: feature:44737-44916:-1:exon
subclass of: SO_0000010

position:44737:-1
position: 44737
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:44916:-1
position: 44916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44737-44916:-1:exon

NLZ15_RS22620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22620
old locus tag: NLZ15_22620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549890.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: NLZ15_RS22620
subclass of: SO_0000673
so part of: NLZ15_RS22620
location: complement(<44737..44916)
location: region:44737-44916:-1
so has part: feature:44737-44916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44737-44916:-1:exon

NLZ15_RS22625
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22625
old locus tag: NLZ15_22625
pseudo: true
so part of: sequence
location: <45180..45878
location: region:45180-45878:1
so has part: feature:45180-45878:1:exon
subclass of: SO_0000010

position:45180:1
position: 45180
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:45878:1
position: 45878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45180-45878:1:exon

NLZ15_RS22625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22625
old locus tag: NLZ15_22625
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005226821.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DeoR/GlpR family DNA-binding transcription regulator
SIO_010081: NLZ15_RS22625
subclass of: SO_0000673
so part of: NLZ15_RS22625
location: <45180..45878
location: region:45180-45878:1
so has part: feature:45180-45878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45180-45878:1:exon

NLZ15_RS22630
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22630
old locus tag: NLZ15_22630
so part of: sequence
location: complement(45899..46759)
location: region:45899-46759:-1
so has part: feature:45899-46759:-1:exon
subclass of: SO_0000010

position:45899:-1
position: 45899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46759:-1
position: 46759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45899-46759:-1:exon

NLZ15_RS22630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22630
old locus tag: NLZ15_22630
EC number: 3.5.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001620095.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extended-spectrum class A beta-lactamase SHV-12
translation: MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASKRGARGIVALLGPNNKAERIVVIYLRDTPASMAERNQQIAGIGAALIEHWQR
SIO_010081: NLZ15_RS22630
subclass of: SO_0000673
so part of: NLZ15_RS22630
location: complement(45899..46759)
location: region:45899-46759:-1
so has part: feature:45899-46759:-1:exon

WP_002904004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45899-46759:-1:exon

NLZ15_RS22635
type: Gene
subclass of: SO_0000704
RO_0002162: 255519
locus tag: NLZ15_RS22635
old locus tag: NLZ15_22635
so part of: sequence
location: 46896..47600
location: region:46896-47600:1
so has part: feature:46896-47600:1:exon
subclass of: SO_0000010

position:46896:1
position: 46896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47600:1
position: 47600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46896-47600:1:exon

NLZ15_RS22635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 255519
locus tag: NLZ15_RS22635
old locus tag: NLZ15_22635
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS26 family transposase
translation: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
SIO_010081: NLZ15_RS22635
subclass of: SO_0000673
so part of: NLZ15_RS22635
location: 46896..47600
location: region:46896-47600:1
so has part: feature:46896-47600:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46896-47600:1:exon