Crateriforma conspicua strain Mal65 chromosome.
Bacteria; Planctomycetota; Planctomycetia; Planctomycetales; Planctomycetaceae; Crateriforma.
Three marine strains constitute the novel genus and species Crateriforma conspicua in the phylum Planctomycetes
Submitted (21-FEB-2019) Microbiology, Radboud Universiteit Nijmegen, Heyendaalseweg 135, Nijmegen 6525AJ, Netherlands
REFSEQ INFORMATION: The reference sequence is identical to\nCP036319.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nBacteria and source DNA available from C. Jogler.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP.3 SMRTPortal v. 2.3.0\nGenome Coverage :: 142x\nSequencing Technology :: PacBio RSII; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/26/2022 07:46:28\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 5,282\nCDSs (total) :: 5,228\nGenes (coding) :: 5,209\nCDSs (with protein) :: 5,209\nGenes (RNA) :: 54\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 6\nPseudo Genes (total) :: 19\nCDSs (without protein) :: 19\nPseudo Genes (ambiguous residues) :: 0 of 19\nPseudo Genes (frameshifted) :: 2 of 19\nPseudo Genes (incomplete) :: 14 of 19\nPseudo Genes (internal stop) :: 5 of 19\nPseudo Genes (multiple problems) :: 2 of 19\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##
COORDINATES: protein motif:HMM:NF012529.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:NF015131.2
COORDINATES: protein motif:HMM:NF014585.2
GO:0003824 - catalytic activity [Evidence IEA]
hydantoinase B/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_013110534.1
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014234.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626775.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: protein motif:HMM:NF004167.0
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013067.2
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014510.2
DNA integrity scanning protein DisA nucleotide-binding domain protein
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_013108882.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006828.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF015891.2
COORDINATES: protein motif:HMM:NF024827.2
COORDINATES: protein motif:HMM:NF015961.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF020621.2
COORDINATES: similar to AA sequence:RefSeq:WP_002648850.1
PSD1 and planctomycete cytochrome C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002648849.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF000768.0
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010587517.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626773.1
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF026115.2
COORDINATES: protein motif:HMM:NF027585.2
COORDINATES: protein motif:HMM:NF013080.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:NF019878.2
COORDINATES: protein motif:HMM:NF014231.2
COORDINATES: protein motif:HMM:NF019259.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111485.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109829.1
COORDINATES: protein motif:HMM:NF036578.2
family 78 glycoside hydrolase catalytic domain
COORDINATES: similar to AA sequence:RefSeq:WP_013629455.1
COORDINATES: protein motif:HMM:NF002203.0
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019299 - rhamnose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02603.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF005560.0
COORDINATES: protein motif:HMM:NF021134.2
COORDINATES: similar to AA sequence:RefSeq:WP_013110452.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_002645229.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: similar to AA sequence:RefSeq:WP_000880088.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:NF015818.2
COORDINATES: protein motif:HMM:NF013961.2
COORDINATES: protein motif:HMM:NF025761.2
circularly permuted type 2 ATP-grasp protein
COORDINATES: protein motif:HMM:NF021424.2
COORDINATES: protein motif:HMM:NF016086.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628021.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583245.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:NF012348.2
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
glutamine synthetase beta-grasp domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003400321.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015049.2
COORDINATES: protein motif:HMM:TIGR00245.1
iron export ABC transporter permease subunit FetB
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:TIGR01970.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002646813.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645417.1
COORDINATES: protein motif:HMM:NF013766.2
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF013782.2
COORDINATES: protein motif:HMM:NF018894.2
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647047.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013111979.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF013183.2
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: protein motif:HMM:NF001899.0
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027593.2
COORDINATES: protein motif:HMM:NF020660.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017003.2
Lpg1974 family pore-forming outer membrane protein
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF004937.0
COORDINATES: similar to AA sequence:RefSeq:WP_013627025.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF013331.2
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF024214.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF012407.2
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: protein motif:HMM:NF014757.2
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: protein motif:HMM:NF018682.2
COORDINATES: protein motif:HMM:NF024859.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630707.1
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF014638.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629474.1
COORDINATES: protein motif:HMM:NF019225.2
PEP-CTERM sorting domain-containing protein
COORDINATES: protein motif:HMM:NF019231.2
COORDINATES: protein motif:HMM:NF022554.2
COORDINATES: protein motif:HMM:NF019242.2
COORDINATES: protein motif:HMM:NF025888.2
COORDINATES: protein motif:HMM:NF017922.2
COORDINATES: protein motif:HMM:TIGR00367.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002645462.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010588263.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF024602.2
COORDINATES: similar to AA sequence:RefSeq:WP_010586513.1
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645381.1
COORDINATES: protein motif:HMM:NF008277.0
COORDINATES: protein motif:HMM:NF018178.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627040.1
COORDINATES: protein motif:HMM:NF012798.2
GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0009294 - DNA-mediated transformation [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: similar to AA sequence:RefSeq:WP_013109179.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111697.1
COORDINATES: protein motif:HMM:NF016258.2
outer membrane protein assembly factor BamE
COORDINATES: similar to AA sequence:RefSeq:WP_013626866.1
COORDINATES: protein motif:HMM:TIGR02574.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF016876.2
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013627623.1
COORDINATES: similar to AA sequence:RefSeq:WP_010581590.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025028.2
COORDINATES: protein motif:HMM:NF025675.2
COORDINATES: protein motif:HMM:NF037207.2
COORDINATES: protein motif:HMM:NF015125.2
COORDINATES: protein motif:HMM:NF025658.2
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611756.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002644626.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF013355.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:TIGR00879.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644317.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019260.2
COORDINATES: protein motif:HMM:NF012428.2
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_013108808.1
COORDINATES: protein motif:HMM:NF012700.2
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: protein motif:HMM:NF025330.2
COORDINATES: similar to AA sequence:RefSeq:WP_010581626.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF027224.2
COORDINATES: protein motif:HMM:TIGR02037.1
COORDINATES: similar to AA sequence:RefSeq:WP_002643907.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00924.1
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: similar to AA sequence:RefSeq:WP_010588097.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018038.2
COORDINATES: protein motif:HMM:NF014606.2
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_010586024.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: protein motif:HMM:NF019589.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629254.1
COORDINATES: protein motif:HMM:NF016535.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649076.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013111196.1
COORDINATES: similar to AA sequence:RefSeq:WP_000648783.1
GO:0047343 - glucose-1-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate cytidylyltransferase
COORDINATES: protein motif:HMM:TIGR02622.1
GO:0047733 - CDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF011936.0
lipopolysaccharide biosynthesis protein RfbH
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: protein motif:HMM:TIGR01221.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013652.2
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF012888.2
COORDINATES: protein motif:HMM:NF012366.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF013681.2
GO:0008107 - galactoside 2-alpha-L-fucosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012377.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626468.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627634.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628908.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626781.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645544.1
COORDINATES: protein motif:HMM:NF002730.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006054.0
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629949.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647336.1
COORDINATES: protein motif:HMM:NF015168.2
COORDINATES: protein motif:HMM:NF011501.0
COORDINATES: similar to AA sequence:RefSeq:WP_013628378.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015916.2
GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IEA]; GO:0030674 - protein-macromolecule adaptor activity [Evidence IEA]; GO:0043130 - ubiquitin binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016144.2
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF024180.2
COORDINATES: similar to AA sequence:RefSeq:WP_010585581.1
COORDINATES: protein motif:HMM:NF019265.2
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:TIGR00181.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02176.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF016241.2
COORDINATES: protein motif:HMM:NF014687.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629595.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646259.1
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF007039.0
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF017551.2
COORDINATES: protein motif:HMM:NF013236.2
FliM/FliN family flagellar motor C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628573.1
COORDINATES: protein motif:HMM:TIGR02604.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629159.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111915.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630739.1
COORDINATES: protein motif:HMM:NF015047.2
COORDINATES: protein motif:HMM:NF019334.2
WD40 repeat domain-containing serine/threonine protein kinase
COORDINATES: protein motif:HMM:NF027971.2
COORDINATES: protein motif:HMM:TIGR02093.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:NF021391.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012437.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF015451.2
COORDINATES: protein motif:HMM:NF012699.2
COORDINATES: protein motif:HMM:NF028007.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013427.2
TraR/DksA family transcriptional regulator
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013627012.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025070.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: protein motif:HMM:NF001965.0
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF013867.2
protein-glutamate O-methyltransferase CheR
COORDINATES: protein motif:HMM:NF018460.2
COORDINATES: similar to AA sequence:RefSeq:WP_002645708.1
COORDINATES: protein motif:HMM:TIGR01083.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010581616.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630922.1
COORDINATES: similar to AA sequence:RefSeq:WP_013800177.1
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: protein motif:HMM:NF003154.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0008741 - ribulokinase activity [Evidence IEA]
GO:0019569 - L-arabinose catabolic process to xylulose 5-phosphate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292990.1
COORDINATES: protein motif:HMM:NF002795.0
GO:0008733 - L-arabinose isomerase activity [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00813.1
GO:0015370 - solute:sodium symporter activity [Evidence IEA]
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF027814.2
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF012412.2
COORDINATES: protein motif:HMM:TIGR01536.1
COORDINATES: protein motif:HMM:NF006771.0
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_010584666.1
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002643963.1
COORDINATES: protein motif:HMM:TIGR00624.1
COORDINATES: protein motif:HMM:NF016240.2
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: protein motif:HMM:NF004044.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013630066.1
COORDINATES: similar to AA sequence:RefSeq:WP_010584971.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002647080.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630367.1
COORDINATES: similar to AA sequence:RefSeq:WP_023226677.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647077.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630370.1
EutN/CcmL family microcompartment protein
COORDINATES: similar to AA sequence:RefSeq:WP_013110012.1
COORDINATES: similar to AA sequence:RefSeq:WP_010584978.1
COORDINATES: protein motif:HMM:NF015289.2
carbon dioxide concentrating mechanism protein CcmL
COORDINATES: similar to AA sequence:RefSeq:WP_013630377.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002647069.1
lactate/malate dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR01241.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010587493.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF013123.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002644526.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644527.1
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: protein motif:HMM:TIGR01967.1
COORDINATES: protein motif:HMM:NF021981.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04406.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627665.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024758.2
COORDINATES: protein motif:HMM:NF012596.2
enoyl-CoA hydratase/isomerase family protein
COORDINATES: protein motif:HMM:NF025885.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013629031.1
COORDINATES: similar to AA sequence:RefSeq:WP_013112062.1
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_002648823.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648822.1
COORDINATES: protein motif:HMM:NF018941.2
COORDINATES: similar to AA sequence:RefSeq:WP_010586963.1
COORDINATES: protein motif:HMM:TIGR00614.1
COORDINATES: protein motif:HMM:NF001136.0
COORDINATES: protein motif:HMM:NF024910.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012398.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024486.2
COORDINATES: protein motif:HMM:NF018644.2
COORDINATES: similar to AA sequence:RefSeq:WP_013109590.1
COORDINATES: protein motif:HMM:NF024860.2
COORDINATES: protein motif:HMM:NF015377.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: protein motif:HMM:TIGR00215.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014517.2
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF019325.2
COORDINATES: protein motif:HMM:TIGR00168.2
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_013629844.1
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF024183.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:NF025033.2
COORDINATES: protein motif:HMM:NF014345.2
COORDINATES: protein motif:HMM:NF019247.2
COORDINATES: similar to AA sequence:RefSeq:WP_002648922.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644078.1
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013628621.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:TIGR03709.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291004.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649615.1
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: protein motif:HMM:NF012485.2
COORDINATES: protein motif:HMM:NF019156.2
COORDINATES: similar to AA sequence:RefSeq:WP_000579369.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019155.2
GO:0046872 - metal ion binding [Evidence IEA]
SEC-C metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016311.2
3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: protein motif:HMM:NF019430.2
Spy/CpxP family protein refolding chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_013111820.1
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:TIGR02984.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02122.1
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630053.1
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013629824.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_013628673.1
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644286.1
COORDINATES: protein motif:HMM:NF024375.2
COORDINATES: protein motif:HMM:NF002060.0
GO:0016410 - N-acyltransferase activity [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: protein motif:HMM:NF037151.2
LpxI, functionally equivalent to LpxH, replaces it in LPS biosynthesis in a minority of bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
UDP-2,3-diacylglucosamine diphosphatase LpxI
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_002647007.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: protein motif:HMM:NF013362.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644447.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF012470.2
COORDINATES: protein motif:HMM:NF015177.2
COORDINATES: protein motif:HMM:NF019356.2
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF027890.2
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF018757.2
COORDINATES: protein motif:HMM:TIGR02226.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627854.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582061.1
COORDINATES: protein motif:HMM:NF025086.2
COORDINATES: protein motif:HMM:NF013884.2
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF017833.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629911.1
COORDINATES: protein motif:HMM:NF019223.2
COORDINATES: protein motif:HMM:NF025715.2
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF025052.2
bifunctional aminoglycoside phosphotransferase/ATP-binding protein
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628813.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_010584849.1
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR00914.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003763.0
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024950.2
SDR family NAD(P)-dependent oxidoreductase
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
carbohydrate binding domain-containing protein
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012516.2
GO:0004650 - polygalacturonase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013628263.1
dihydrodipicolinate synthase family protein
WD40 repeat domain-containing serine/threonine-protein kinase
COORDINATES: protein motif:HMM:TIGR02474.1
GO:0030570 - pectate lyase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014850.2
COORDINATES: similar to AA sequence:RefSeq:WP_004398654.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647691.1
COORDINATES: protein motif:HMM:NF039183.1
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629954.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016293468.1
COORDINATES: similar to AA sequence:RefSeq:WP_017201569.1
COORDINATES: protein motif:HMM:NF012478.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:NF002542.0
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111195.1
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: protein motif:HMM:NF013836.2
GO:0070569 - uridylyltransferase activity [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002643673.1
COORDINATES: protein motif:HMM:NF015077.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:TIGR00165.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:TIGR02402.1
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
malto-oligosyltrehalose trehalohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_002647394.1
iron-sulfur cluster assembly accessory protein
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_013110524.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013109607.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_010587123.1
COORDINATES: protein motif:HMM:TIGR00562.1
GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04053.2
TIGR04053 family radical SAM/SPASM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013629486.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629487.1
GO:0015535 - fucose:proton symporter activity [Evidence IEA]
GO:0015756 - fucose transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013630217.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630216.1
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010584180.1
COORDINATES: protein motif:HMM:NF027582.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647757.1
COORDINATES: protein motif:HMM:NF019040.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629305.1
COORDINATES: protein motif:HMM:NF018269.2
COORDINATES: protein motif:HMM:NF018648.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111892.1
COORDINATES: protein motif:HMM:NF015607.2
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013627628.1
COORDINATES: protein motif:HMM:NF014527.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: similar to AA sequence:RefSeq:WP_013108321.1
COORDINATES: protein motif:HMM:NF012387.2
COORDINATES: protein motif:HMM:NF015559.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:NF013391.2
GO:0016301 - kinase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021613.2
COORDINATES: similar to AA sequence:RefSeq:WP_010584380.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002557.0
COORDINATES: similar to AA sequence:RefSeq:WP_010584122.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644484.1
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF013509.2
COORDINATES: protein motif:HMM:TIGR00222.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:TIGR01198.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002648057.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629304.1
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: similar to AA sequence:RefSeq:WP_010584153.1
TadE/TadG family type IV pilus assembly protein
COORDINATES: protein motif:HMM:NF019428.2
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: similar to AA sequence:RefSeq:WP_010585091.1
histidine triad nucleotide-binding protein
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: similar to AA sequence:RefSeq:WP_145373251.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013627720.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010588356.1
COORDINATES: protein motif:HMM:NF013456.2
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_013108309.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013111504.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582182.1
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002649826.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111219.1
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02595.1
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:TIGR01709.2
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: protein motif:HMM:TIGR01710.1
type II secretion system major pseudopilin GspG
COORDINATES: similar to AA sequence:RefSeq:WP_010583124.1
COORDINATES: protein motif:HMM:NF020390.2
COORDINATES: protein motif:HMM:TIGR01499.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627912.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630809.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002648805.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF021435.2
COORDINATES: protein motif:HMM:TIGR01027.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013109529.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108723.1
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010587119.1
COORDINATES: similar to AA sequence:RefSeq:WP_010585166.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_013110481.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627044.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111275.1
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013627860.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109072.1
COORDINATES: protein motif:HMM:TIGR03177.1
pilus assembly protein N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013627865.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644440.1
COORDINATES: protein motif:HMM:NF025605.2
COORDINATES: protein motif:HMM:NF002073.0
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013628920.1
COORDINATES: protein motif:HMM:NF023444.2
COORDINATES: similar to AA sequence:RefSeq:WP_013631072.1
COORDINATES: protein motif:HMM:NF002458.0
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013631046.1
3-isopropylmalate dehydratase large subunit
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013112443.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010585033.1
COORDINATES: similar to AA sequence:RefSeq:WP_010588226.1
COORDINATES: protein motif:HMM:NF015084.2
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF014658.2
COORDINATES: protein motif:HMM:TIGR03664.1
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002647578.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013631069.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630064.1
COORDINATES: protein motif:HMM:TIGR03593.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00234.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002648142.1
COORDINATES: protein motif:HMM:NF018884.2
COORDINATES: protein motif:HMM:NF012337.2
COORDINATES: protein motif:HMM:NF024948.2
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: protein motif:HMM:NF019221.2
BBP7 family outer membrane beta-barrel protein
COORDINATES: similar to AA sequence:RefSeq:WP_013108337.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002644524.1
COORDINATES: protein motif:HMM:NF012647.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627982.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627613.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:NF024273.2
COORDINATES: protein motif:HMM:NF013328.2
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF002003.0
GO:0003905 - alkylbase DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010581760.1
COORDINATES: protein motif:HMM:NF024904.2
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:TIGR04137.1
COORDINATES: protein motif:HMM:NF015764.2
COORDINATES: similar to AA sequence:RefSeq:WP_010583759.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628112.1
COORDINATES: protein motif:HMM:TIGR04332.1
COORDINATES: protein motif:HMM:TIGR04011.1
GO:0070501 - poly-gamma-glutamate biosynthetic process [Evidence IEA]
poly-gamma-glutamate biosynthesis protein PgsC
COORDINATES: protein motif:HMM:TIGR04012.1
COORDINATES: protein motif:HMM:NF020032.2
COORDINATES: protein motif:HMM:NF016032.2
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
glutamate-cysteine ligase family protein
COORDINATES: protein motif:HMM:NF016873.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649761.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:TIGR04138.1
COORDINATES: similar to AA sequence:RefSeq:WP_002643965.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: similar to AA sequence:RefSeq:WP_013112290.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644363.1
COORDINATES: protein motif:HMM:TIGR01683.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013630320.1
COORDINATES: protein motif:HMM:NF012925.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF013052.2
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: protein motif:HMM:NF039484.1
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019604.2
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013630063.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648024.1
COORDINATES: protein motif:HMM:NF021588.2
COORDINATES: protein motif:HMM:NF014414.2
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629495.1
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013628814.1
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: protein motif:HMM:NF023510.2
COORDINATES: similar to AA sequence:RefSeq:WP_013112056.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0008941 - nitric oxide dioxygenase activity [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]
GO:0051409 - response to nitrosative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF025615.2
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:TIGR04265.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002643514.1
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF014851.2
COORDINATES: protein motif:HMM:TIGR01397.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002649506.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013300.2
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:NF040048.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111646.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629530.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629532.1
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629534.1
COORDINATES: similar to AA sequence:RefSeq:WP_010587843.1
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF013524.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00557.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF024578.2
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626488.1
COORDINATES: protein motif:HMM:TIGR00070.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001611.0
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00393.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:TIGR01670.1
COORDINATES: protein motif:HMM:NF016915.2
COORDINATES: protein motif:HMM:TIGR00044.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF040466.1
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: protein motif:HMM:NF013345.2
COORDINATES: protein motif:HMM:NF023462.2
COORDINATES: similar to AA sequence:RefSeq:WP_010583004.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110179.1
COORDINATES: protein motif:HMM:NF013691.2
COORDINATES: similar to AA sequence:RefSeq:WP_013112075.1
COORDINATES: protein motif:HMM:TIGR03121.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
formylmethanofuran dehydrogenase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_010584748.1
formylmethanofuran--tetrahydromethanopterin N-formyltransferase
COORDINATES: protein motif:HMM:TIGR03122.1
GO:0018493 - formylmethanofuran dehydrogenase activity [Evidence IEA]
formylmethanofuran dehydrogenase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010584314.1
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF013878.2
COORDINATES: protein motif:HMM:NF024605.2
COORDINATES: protein motif:HMM:NF024204.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
toll/interleukin-1 receptor domain-containing protein
COORDINATES: protein motif:HMM:NF018691.2
COORDINATES: protein motif:HMM:NF020332.2
COORDINATES: protein motif:HMM:NF024554.2
DUF3991 and TOPRIM domain-containing protein
COORDINATES: protein motif:HMM:NF012464.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021637.2
COORDINATES: protein motif:HMM:NF014581.2
type IV secretory system conjugative DNA transfer family protein
COORDINATES: protein motif:HMM:NF024139.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF014689.2
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF033580.1
COORDINATES: protein motif:HMM:NF028103.2
DNA-primase RepB domain-containing protein
COORDINATES: protein motif:HMM:NF021897.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:TIGR02686.1
COORDINATES: protein motif:HMM:NF019997.2
ArdC-like ssDNA-binding domain-containing protein
MerR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF033447.1
COORDINATES: protein motif:HMM:NF020425.2
COORDINATES: protein motif:HMM:NF020329.2
COORDINATES: protein motif:HMM:NF033441.0
COORDINATES: protein motif:HMM:NF033452.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
BREX-1 system adenine-specific DNA-methyltransferase PglX
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF020249.2
COORDINATES: protein motif:HMM:TIGR02653.1
GO:0005575 - cellular_component [Evidence IEA]
protease Lon-related BREX system protein BrxL
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: protein motif:HMM:NF017591.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629361.1
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630408.1
COORDINATES: protein motif:HMM:NF015180.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646692.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629301.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629300.1
COORDINATES: protein motif:HMM:NF014237.2
COORDINATES: protein motif:HMM:NF012551.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627076.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649138.1
COORDINATES: protein motif:HMM:NF025852.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627079.1
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF014116.2
COORDINATES: protein motif:HMM:NF016906.2
COORDINATES: protein motif:HMM:NF013381.2
COORDINATES: protein motif:HMM:NF014961.2
COORDINATES: protein motif:HMM:NF014375.2
uroporphyrinogen decarboxylase family protein
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630196.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013627081.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629482.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629479.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648632.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013629477.1
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF019474.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF019349.2
FadR/GntR family transcriptional regulator
COORDINATES: protein motif:HMM:NF019556.2
COORDINATES: protein motif:HMM:NF022766.2
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF017745.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646917.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF019240.2
COORDINATES: protein motif:HMM:TIGR00630.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01353.1
GO:0008832 - dGTPase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010586555.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013108526.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014460.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013628576.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586008.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_008426562.1
COORDINATES: protein motif:HMM:NF012793.2
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013628340.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_002484165.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582657.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582980.1
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628951.1
COORDINATES: similar to AA sequence:RefSeq:WP_008063311.1
COORDINATES: similar to AA sequence:RefSeq:WP_000279412.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF025597.2
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582282.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF004076.0
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: protein motif:HMM:NF012422.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649269.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0003957 - NAD(P)+ transhydrogenase (B-specific) activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002647284.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_010582647.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: protein motif:HMM:TIGR01003.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582645.1
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF016274.2
helix-turn-helix transcriptional regulator
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF022019.2
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF016430.2
COORDINATES: protein motif:HMM:NF024870.2
COORDINATES: protein motif:HMM:NF016896.2
COORDINATES: protein motif:HMM:NF017663.2
GO:0000287 - magnesium ion binding [Evidence IEA]
RusA family crossover junction endodeoxyribonuclease
COORDINATES: protein motif:HMM:NF016724.2
COORDINATES: protein motif:HMM:NF024547.2
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF025555.2
COORDINATES: protein motif:HMM:NF016924.2
winged helix-turn-helix domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF02276
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF023645.2
COORDINATES: protein motif:HMM:NF017673.2
phage terminase large subunit family protein
COORDINATES: protein motif:HMM:NF016991.2
COORDINATES: protein motif:HMM:NF021473.2
COORDINATES: protein motif:HMM:TIGR01760.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016032 - viral process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
four-helix bundle copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010584864.1
COORDINATES: protein motif:HMM:NF019351.2
COORDINATES: similar to AA sequence:RefSeq:WP_009104476.1
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:NF019500.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002644013.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629940.1
COORDINATES: protein motif:HMM:TIGR01525.1
COORDINATES: protein motif:HMM:TIGR01297.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF012621.2
heavy metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002648770.1
COORDINATES: protein motif:HMM:NF022598.2
COORDINATES: protein motif:HMM:NF023295.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:TIGR02613.1
COORDINATES: protein motif:HMM:NF020265.2
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:TIGR02989.1
COORDINATES: protein motif:HMM:NF026058.2
COORDINATES: protein motif:HMM:NF024759.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629290.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629289.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629287.1
COORDINATES: protein motif:HMM:NF037334.2
COORDINATES: protein motif:HMM:NF015798.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649448.1
COORDINATES: protein motif:HMM:NF033487.1
COORDINATES: protein motif:HMM:TIGR00106.1
COORDINATES: protein motif:HMM:NF024592.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646597.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646598.1
COORDINATES: protein motif:HMM:NF020337.2
COORDINATES: protein motif:HMM:NF020916.2
polyphosphate polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF027640.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628429.1
GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002646469.1
protein tyrosine phosphatase family protein
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_010582119.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629389.1
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649109.1
COORDINATES: protein motif:HMM:NF037997.1
GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03707.1
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006793 - phosphorus metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002648921.1
COORDINATES: protein motif:HMM:NF018561.2
COORDINATES: similar to AA sequence:RefSeq:WP_002686292.1
COORDINATES: similar to AA sequence:RefSeq:WP_013112258.1
Trx7/PDZ domain-containing (seleno)protein
COORDINATES: similar to AA sequence:RefSeq:WP_013629457.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629456.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629483.1
COORDINATES: protein motif:HMM:NF023273.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644036.1
COORDINATES: protein motif:HMM:NF013607.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629309.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015277.2
GO:0047605 - acetolactate decarboxylase activity [Evidence IEA]
GO:0045151 - acetoin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01845.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629405.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629404.1
COORDINATES: protein motif:HMM:NF019222.2
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF025627.2
COORDINATES: protein motif:HMM:TIGR00014.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024101.2
COORDINATES: similar to AA sequence:RefSeq:WP_010581890.1
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_013112380.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108795.1
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649086.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013630198.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013631048.1
COORDINATES: protein motif:HMM:NF038134.1
choice-of-anchor M domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013630184.1
COORDINATES: protein motif:HMM:NF004991.0
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF008275.0
oxygen-insensitive NAD(P)H nitroreductase
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF025851.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630222.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111054.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582306.1
glycoside hydrolase family 71/99-like protein
COORDINATES: protein motif:HMM:NF012993.2
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: protein motif:HMM:NF016807.2
COORDINATES: protein motif:HMM:NF019320.2
heme NO-binding domain-containing protein
COORDINATES: protein motif:HMM:NF018190.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF025063.2
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013630573.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647677.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108985.1
COORDINATES: protein motif:HMM:NF015585.2
COORDINATES: protein motif:HMM:NF024673.2
COORDINATES: protein motif:HMM:NF019313.2
COORDINATES: protein motif:HMM:NF018242.2
COORDINATES: protein motif:HMM:NF016178.2
COORDINATES: protein motif:HMM:NF018154.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013122.2
COORDINATES: protein motif:HMM:TIGR02452.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644048.1
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF021631.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611247.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644046.1
COORDINATES: protein motif:HMM:NF025602.2
COORDINATES: protein motif:HMM:NF013798.2
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: protein motif:HMM:TIGR01784.1
Rpn family recombination-promoting nuclease/putative transposase
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013630588.1
cytochrome c nitrite reductase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013630589.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
ammonia-forming cytochrome c nitrite reductase subunit c552
COORDINATES: protein motif:HMM:NF015851.2
COORDINATES: protein motif:HMM:NF024634.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF021235.2
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:NF012267.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627206.1
COORDINATES: protein motif:HMM:NF012343.2
COORDINATES: protein motif:HMM:TIGR03652.1
GO:0005506 - iron ion binding [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
iron-sulfur cluster repair di-iron protein
COORDINATES: protein motif:HMM:NF020317.2
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627207.1
COORDINATES: similar to AA sequence:RefSeq:WP_010584243.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024765.2
COORDINATES: protein motif:HMM:NF020397.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111419.1
COORDINATES: protein motif:HMM:NF024769.2
COORDINATES: protein motif:HMM:NF024898.2
COORDINATES: protein motif:HMM:NF020811.2
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF017773.2
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014442.2
COORDINATES: similar to AA sequence:RefSeq:WP_010582977.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
GO:0019867 - outer membrane [Evidence IEA]
secretin and TonB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013630248.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_002649241.1
COORDINATES: similar to AA sequence:RefSeq:WP_013112170.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: protein motif:HMM:NF020928.2
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_000462687.1
aspartate/tyrosine/aromatic aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013630199.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630210.1
COORDINATES: protein motif:HMM:NF033788.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648774.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648775.1
COORDINATES: protein motif:HMM:NF040125.1
COORDINATES: similar to AA sequence:RefSeq:WP_010584117.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: protein motif:HMM:NF014584.2
COORDINATES: similar to AA sequence:RefSeq:WP_010586924.1
COORDINATES: similar to AA sequence:RefSeq:WP_010581820.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629236.1
COORDINATES: protein motif:HMM:NF024850.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF025793.2
COORDINATES: similar to AA sequence:RefSeq:WP_010582302.1
COORDINATES: protein motif:HMM:NF022135.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629605.1
COORDINATES: protein motif:HMM:NF016027.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629607.1
COORDINATES: protein motif:HMM:NF013703.2
COORDINATES: protein motif:HMM:NF013869.2
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_002644801.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111718.1
COORDINATES: protein motif:HMM:NF014803.2
COORDINATES: protein motif:HMM:NF024846.2
FAD/NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002648953.1
2,3-diaminopropionate biosynthesis protein SbnA
COORDINATES: protein motif:HMM:NF024197.2
COORDINATES: similar to AA sequence:RefSeq:WP_010588344.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002649145.1
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_013112055.1
COORDINATES: protein motif:HMM:NF012630.2
GO:0031012 - extracellular matrix [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018647.2
COORDINATES: protein motif:HMM:NF014500.2
COORDINATES: similar to AA sequence:RefSeq:WP_010582916.1
COORDINATES: protein motif:HMM:NF025589.2
COORDINATES: similar to AA sequence:RefSeq:WP_002643763.1
COORDINATES: protein motif:HMM:NF013591.2
COORDINATES: protein motif:HMM:NF024106.2
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF039847.1
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: similar to AA sequence:RefSeq:WP_010586683.1
COORDINATES: protein motif:HMM:NF033592.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF024488.2
COORDINATES: protein motif:HMM:NF017015.2
COORDINATES: protein motif:HMM:NF037510.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: protein motif:HMM:NF037889.2
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: protein motif:HMM:NF021041.2
COORDINATES: protein motif:HMM:NF013335.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024878.2
COORDINATES: protein motif:HMM:NF012911.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626522.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586906.1
COORDINATES: protein motif:HMM:TIGR00487.1
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110810.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF024923.2
COORDINATES: protein motif:HMM:NF014686.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626461.1
GO:0016840 - carbon-nitrogen lyase activity [Evidence IEA]
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010585347.1
methylenetetrahydromethanopterin dehydrogenase
COORDINATES: protein motif:HMM:NF015780.2
COORDINATES: similar to AA sequence:RefSeq:WP_002645446.1
COORDINATES: protein motif:HMM:NF005122.0
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
vitamin B12-dependent ribonucleotide reductase
COORDINATES: protein motif:HMM:NF013624.2
COORDINATES: similar to AA sequence:RefSeq:WP_010582618.1
COORDINATES: protein motif:HMM:NF025833.2
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: protein motif:HMM:NF014628.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111866.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628771.1
COORDINATES: protein motif:HMM:NF006829.0
COORDINATES: similar to AA sequence:RefSeq:WP_010584717.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002647741.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647310.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583436.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010583437.1
COORDINATES: protein motif:HMM:NF027637.2
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF015438.2
COORDINATES: similar to AA sequence:RefSeq:WP_010584587.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF018637.2
arsenite efflux transporter metallochaperone ArsD
COORDINATES: similar to AA sequence:RefSeq:WP_013629918.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629577.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630061.1
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: protein motif:HMM:TIGR00502.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013108299.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109736.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF012455.2
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013108724.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_010587115.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_002647375.1
TAT-variant-translocated molybdopterin oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_010587456.1
COORDINATES: protein motif:HMM:NF023249.2
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647382.1
COORDINATES: similar to AA sequence:RefSeq:WP_010587462.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630951.1
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:NF015527.2
sulfotransferase family 2 domain-containing protein
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_013631047.1
COORDINATES: protein motif:HMM:NF016270.2
COORDINATES: similar to AA sequence:RefSeq:WP_002648217.1
formylglycine-generating enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013629713.1
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647352.1
COORDINATES: protein motif:HMM:TIGR00357.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF036499.2
COORDINATES: similar to AA sequence:RefSeq:WP_013108899.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: protein motif:HMM:NF013213.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF013247.2
transglutaminase domain-containing protein
COORDINATES: protein motif:HMM:NF018663.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627845.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649591.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010583969.1
COORDINATES: protein motif:HMM:NF012272.2
GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025890.2
COORDINATES: protein motif:HMM:TIGR02284.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583591.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108655.1
COORDINATES: protein motif:HMM:NF019350.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629137.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_010585427.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629541.1
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: similar to AA sequence:RefSeq:WP_010588055.1
COORDINATES: protein motif:HMM:NF021466.2
COORDINATES: protein motif:HMM:NF013508.2
COORDINATES: protein motif:HMM:NF019473.2
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_010587618.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010584363.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF001986.0
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01966.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039746.1
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644731.1
COORDINATES: similar to AA sequence:RefSeq:WP_002643915.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645754.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008865.0
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013631074.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010581879.1
COORDINATES: protein motif:HMM:NF023459.2
von Willebrand factor type A domain-containing protein
COORDINATES: protein motif:HMM:NF027219.2
COORDINATES: protein motif:HMM:NF019121.2
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626829.1
COORDINATES: protein motif:HMM:NF024799.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: protein motif:HMM:NF025611.2
GO:0005509 - calcium ion binding [Evidence IEA]
GO:0007156 - homophilic cell adhesion via plasma membrane adhesion molecules [Evidence IEA]
COORDINATES: protein motif:HMM:NF003802.0
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627996.1
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01051.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016688838.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645953.1
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: similar to AA sequence:RefSeq:WP_010587427.1
COORDINATES: protein motif:HMM:NF014447.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014386.2
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_013627922.1
COORDINATES: similar to AA sequence:RefSeq:WP_004152765.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: protein motif:HMM:TIGR03696.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627848.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646387.1
COORDINATES: protein motif:HMM:NF013636.2
proprotein convertase P-domain-containing protein
COORDINATES: protein motif:HMM:NF017355.2
toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_002649548.1
COORDINATES: protein motif:HMM:NF020039.2
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626800.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628414.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109631.1
COORDINATES: protein motif:HMM:NF014688.2
COORDINATES: protein motif:HMM:NF021942.2
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: protein motif:HMM:TIGR03025.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
undecaprenyl-phosphate galactose phosphotransferase WbaP
COORDINATES: protein motif:HMM:TIGR01007.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF017011.2
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: similar to AA sequence:RefSeq:WP_010587760.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021494.2
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF022172.2
COORDINATES: similar to AA sequence:RefSeq:WP_004357632.1
COORDINATES: similar to AA sequence:RefSeq:WP_013112207.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626964.1
COORDINATES: protein motif:HMM:NF037677.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627069.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647024.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647023.1
COORDINATES: protein motif:HMM:NF022039.2
COORDINATES: protein motif:HMM:NF024240.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644766.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627450.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021486.2
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: similar to AA sequence:RefSeq:WP_010586214.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013630622.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00116.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645116.1
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002645244.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110857.1
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110455.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649242.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010582881.1
flotillin-like protein involved in membrane lipid rafts; flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:NF019491.2
COORDINATES: protein motif:HMM:NF019219.2
COORDINATES: protein motif:HMM:TIGR03022.1
COORDINATES: protein motif:HMM:NF025654.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626498.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF003657.0
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: protein motif:HMM:NF015299.2
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647672.1
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF012305.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627886.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629481.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110994.1
GO:0016166 - phytoene dehydrogenase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013702.2
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013627436.1
COORDINATES: protein motif:HMM:NF012589.2
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_013629685.1
COORDINATES: protein motif:HMM:NF017280.2
COORDINATES: similar to AA sequence:RefSeq:WP_000043654.1
COORDINATES: similar to AA sequence:RefSeq:WP_002643668.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110986.1
COORDINATES: protein motif:HMM:NF012361.2
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012760.2
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:NF014062.2
GO:0019812 - type I site-specific deoxyribonuclease complex [Evidence IEA]
GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
HsdR family type I site-specific deoxyribonuclease
COORDINATES: protein motif:HMM:TIGR04256.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583953.1
COORDINATES: protein motif:HMM:TIGR00097.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013111095.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630441.1
TerB family tellurite resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_002649012.1
phosphopantothenoylcysteine decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_013109048.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013111736.1
COORDINATES: protein motif:HMM:TIGR00005.1
tyrosine-protein kinase domain-containing protein
COORDINATES: protein motif:HMM:NF021254.2
COORDINATES: protein motif:HMM:NF024876.2
COORDINATES: similar to AA sequence:RefSeq:WP_002648323.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586105.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108636.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627934.1
polysaccharide pyruvyl transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002645993.1
COORDINATES: protein motif:HMM:NF024600.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629902.1
GO:0030745 - dimethylhistidine N-methyltransferase activity [Evidence IEA]
GO:0052699 - ergothioneine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF005121.0
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
pyrophosphate--fructose-6-phosphate 1-phosphotransferase
COORDINATES: protein motif:HMM:NF014534.2
HPF/RaiA family ribosome-associated protein
COORDINATES: protein motif:HMM:NF006754.0
GO:0031956 - medium-chain fatty acid-CoA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00768.1
COORDINATES: protein motif:HMM:TIGR03120.1
GO:0018759 - methenyltetrahydromethanopterin cyclohydrolase activity [Evidence IEA]
methenyltetrahydromethanopterin cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013629877.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627789.1
cofactor-independent phosphoglycerate mutase
carboxypeptidase-like regulatory domain-containing protein
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013626455.1
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF002872.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648721.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010588499.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647332.1
COORDINATES: protein motif:HMM:NF014077.2
COORDINATES: protein motif:HMM:NF004326.0
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF012904.2
COORDINATES: similar to AA sequence:RefSeq:WP_010585112.1
COORDINATES: protein motif:HMM:NF015655.2
glutamate-ammonia-ligase adenylyltransferase
COORDINATES: protein motif:HMM:NF008967.0
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110762.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013110760.1
COORDINATES: protein motif:HMM:TIGR00001.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629231.1
COORDINATES: protein motif:HMM:NF020771.2
CerR family C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: protein motif:HMM:NF015951.2
COORDINATES: protein motif:HMM:NF014703.2
COORDINATES: protein motif:HMM:NF012885.2
(2Fe-2S) ferredoxin domain-containing protein
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012375.2
COORDINATES: protein motif:HMM:TIGR01283.1
GO:0009399 - nitrogen fixation [Evidence IEA]
nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
nitrogenase molybdenum-iron protein subunit beta
COORDINATES: protein motif:HMM:TIGR01282.1
GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO:0016163 - nitrogenase activity [Evidence IEA]
nitrogenase molybdenum-iron protein alpha chain
COORDINATES: protein motif:HMM:TIGR01287.1
GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF024644.2
COORDINATES: similar to AA sequence:RefSeq:WP_010588100.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111546.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002648736.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_003225781.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649822.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627994.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628561.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110204.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630752.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013111869.1
COORDINATES: protein motif:HMM:NF016028.2
COORDINATES: similar to AA sequence:RefSeq:WP_010586079.1
penicillin-binding protein activator LpoB
COORDINATES: protein motif:HMM:TIGR00739.1
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01129.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF018290.2
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111858.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: protein motif:HMM:NF018058.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647638.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF035939.1
COORDINATES: protein motif:HMM:NF013592.2
COORDINATES: protein motif:HMM:TIGR00200.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: protein motif:HMM:NF016102.2
SpaA isopeptide-forming pilin-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_013629119.1
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: protein motif:HMM:NF013595.2
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002380184.1
GO:0015250 - water channel activity [Evidence IEA]
GO:0006833 - water transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00341.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627931.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628016.1
beta galactosidase jelly roll domain-containing protein
COORDINATES: protein motif:HMM:NF018123.2
COORDINATES: protein motif:HMM:NF024844.2
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF014564.2
CaiB/BaiF CoA-transferase family protein
COORDINATES: protein motif:HMM:NF013722.2
COORDINATES: protein motif:HMM:NF012622.2
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
dockerin type I domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002332357.1
COORDINATES: protein motif:HMM:NF036995.2
PDDEXK nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF003995.0
redox-sensing transcriptional repressor Rex
COORDINATES: protein motif:HMM:NF019266.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111840.1
GO:0019213 - deacetylase activity [Evidence IEA]
bacillithiol biosynthesis deacetylase BshB1
COORDINATES: protein motif:HMM:NF012424.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013630807.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
low molecular weight phosphotyrosine protein phosphatase
COORDINATES: protein motif:HMM:NF014090.2
COORDINATES: similar to AA sequence:RefSeq:WP_010581889.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629007.1
COORDINATES: protein motif:HMM:NF001503.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: similar to AA sequence:RefSeq:WP_010585012.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644896.1
COORDINATES: protein motif:HMM:TIGR03009.1
COORDINATES: protein motif:HMM:NF025892.2
COORDINATES: similar to AA sequence:RefSeq:WP_010587226.1
COORDINATES: protein motif:HMM:NF033679.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629560.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_010583964.1
COORDINATES: protein motif:HMM:NF014498.2
COORDINATES: similar to AA sequence:RefSeq:WP_000025290.1
COORDINATES: protein motif:HMM:NF014997.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646551.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626514.1
COORDINATES: protein motif:HMM:NF012753.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626754.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628965.1
COORDINATES: protein motif:HMM:NF013126.2
COORDINATES: protein motif:HMM:NF012475.2
COORDINATES: protein motif:HMM:NF027452.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF017658.2
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015803.2
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_016293078.1
COORDINATES: protein motif:HMM:NF022636.2
COORDINATES: protein motif:HMM:NF028519.2
COORDINATES: protein motif:HMM:NF012618.2
COORDINATES: protein motif:HMM:NF012951.2
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013111709.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013715.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626720.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645388.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630815.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00516.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00131.1
GO:0004335 - galactokinase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002646256.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF025743.2
COORDINATES: protein motif:HMM:NF013237.2
PLP-dependent aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF001159.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013630986.1
COORDINATES: protein motif:HMM:NF019220.2
COORDINATES: protein motif:HMM:NF013255.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629771.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646333.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646334.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630223.1
COORDINATES: protein motif:HMM:NF008353.0
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002648121.1
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002647855.1
COORDINATES: protein motif:HMM:NF023390.2
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: protein motif:HMM:NF013071.2
COORDINATES: similar to AA sequence:RefSeq:WP_010583574.1
COORDINATES: protein motif:HMM:NF018980.2
COORDINATES: protein motif:HMM:NF017353.2
COORDINATES: protein motif:HMM:TIGR03067.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586388.1
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:TIGR01733.1
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF040105.1
COORDINATES: protein motif:HMM:NF025674.2
COORDINATES: protein motif:HMM:NF019339.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627226.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647204.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646098.1
COORDINATES: protein motif:HMM:NF013411.2
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016005.2
GO:0051304 - chromosome separation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013627729.1
COORDINATES: protein motif:HMM:NF017007.2
COORDINATES: protein motif:HMM:NF015119.2
proteasome accessory factor PafA2 family protein
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF024176.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:TIGR04122.1
ligase-associated DNA damage response exonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_016453714.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04121.1
GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
ligase-associated DNA damage response DEXH box helicase
COORDINATES: protein motif:HMM:TIGR04123.1
ligase-associated DNA damage response endonuclease PdeM
COORDINATES: similar to AA sequence:RefSeq:WP_010582585.1
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_002686314.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626994.1
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010585484.1
COORDINATES: protein motif:HMM:NF023246.2
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:TIGR00665.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04416.1
COORDINATES: similar to AA sequence:RefSeq:WP_010584534.1
replication-associated recombination protein A
COORDINATES: protein motif:HMM:NF019032.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629004.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013627389.1
COORDINATES: protein motif:HMM:NF019269.2
COORDINATES: protein motif:HMM:NF023376.2
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628984.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644648.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_002644649.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013111030.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013109635.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013112345.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016908.2
COORDINATES: protein motif:HMM:TIGR01093.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010582970.1
coproporphyrinogen-III oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013111555.1
COORDINATES: protein motif:HMM:TIGR00456.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013112448.1
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03319.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015679.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002646823.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017464.2
COORDINATES: protein motif:HMM:TIGR01777.1
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010583616.1
COORDINATES: protein motif:HMM:NF013222.2
COORDINATES: protein motif:HMM:NF023945.2
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:TIGR01943.1
GO:0009055 - electron transfer activity [Evidence IEA]
RnfABCDGE type electron transport complex subunit A
COORDINATES: protein motif:HMM:NF009070.0
COORDINATES: protein motif:HMM:NF015100.2
RnfABCDGE type electron transport complex subunit D
COORDINATES: protein motif:HMM:NF003454.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013974.2
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:TIGR01944.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_010583528.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00006.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:NF019042.2
COORDINATES: protein motif:HMM:TIGR00344.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002645454.1
COORDINATES: protein motif:HMM:NF023418.2
transglutaminaseTgpA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010587160.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629331.1
COORDINATES: protein motif:HMM:TIGR01280.1
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:NF003933.0
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647238.1
COORDINATES: similar to AA sequence:RefSeq:WP_010587835.1
COORDINATES: protein motif:HMM:NF023549.2
COORDINATES: protein motif:HMM:NF025465.2
COORDINATES: protein motif:HMM:NF013068.2
COORDINATES: protein motif:HMM:NF025107.2
COORDINATES: protein motif:HMM:NF015736.2
COORDINATES: protein motif:HMM:NF024767.2
beta-propeller fold lactonase family protein
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110321.1
COORDINATES: protein motif:HMM:NF016693.2
COORDINATES: similar to AA sequence:RefSeq:WP_010584414.1
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:NF037982.1
COORDINATES: protein motif:HMM:TIGR01175.1
GO:0009297 - pilus assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF033855.1
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]
tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:NF017416.2
COORDINATES: protein motif:HMM:NF024640.2
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01428.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020976.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628012.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110328.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021252.2
COORDINATES: protein motif:HMM:NF040495.1
aromatic aminobenezylarsenical efflux permease ArsG family transporter
COORDINATES: protein motif:HMM:NF040494.1
nitrophenyl compound nitroreductase subunit ArsF family protein
COORDINATES: protein motif:HMM:TIGR00412.2
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF022103.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628523.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647268.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002647267.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647266.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647265.1
zinc ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: protein motif:HMM:TIGR03990.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019013.2
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002648500.1
COORDINATES: protein motif:HMM:NF020037.2
COORDINATES: protein motif:HMM:NF025181.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630723.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583916.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013108331.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021387.2
GO:0050043 - lactate racemase activity [Evidence IEA]
lactate racemase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002648152.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646881.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01212.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002644193.1
COORDINATES: protein motif:HMM:NF014426.2
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:NF024045.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647680.1
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: similar to AA sequence:RefSeq:WP_002643669.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629786.1
COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647308.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_013627877.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630527.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647225.1
COORDINATES: protein motif:HMM:NF013507.2
COORDINATES: protein motif:HMM:NF015423.2
trimeric intracellular cation channel family protein
DUF1549 and DUF1553 domain-containing protein
COORDINATES: protein motif:HMM:NF008630.0
COORDINATES: protein motif:HMM:NF004624.0
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_002645753.1
COORDINATES: protein motif:HMM:NF025460.2
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_017789372.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR02136.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629612.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629624.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626384.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626383.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02246.1
COORDINATES: protein motif:HMM:NF025716.2
COORDINATES: similar to AA sequence:RefSeq:WP_011047645.1
COORDINATES: protein motif:HMM:TIGR03571.1
COORDINATES: protein motif:HMM:NF025861.2
glycoside hydrolase family 97 N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF028181.2
COORDINATES: similar to AA sequence:RefSeq:WP_008807975.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646493.1
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628161.1
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013627842.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582685.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_002649773.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013630274.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013630279.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111179.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630271.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002647158.1
COORDINATES: protein motif:HMM:NF025141.2
COORDINATES: protein motif:HMM:NF019908.2
COORDINATES: protein motif:HMM:NF015587.2
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01203.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: similar to AA sequence:RefSeq:WP_001460503.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646434.1
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002647475.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629548.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646313.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646312.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013629543.1
COORDINATES: similar to AA sequence:RefSeq:WP_010584799.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016563.2
COORDINATES: protein motif:HMM:NF022623.2
COORDINATES: protein motif:HMM:NF023636.2
COORDINATES: similar to AA sequence:RefSeq:WP_002648803.1
COORDINATES: protein motif:HMM:NF022646.2
COORDINATES: protein motif:HMM:NF027567.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628156.1
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013627185.1
COORDINATES: protein motif:HMM:NF009384.0
COORDINATES: protein motif:HMM:NF024637.2
COORDINATES: protein motif:HMM:NF018590.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644099.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644102.1
COORDINATES: protein motif:HMM:NF015720.2
COORDINATES: protein motif:HMM:NF014477.2
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF013081.2
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010582495.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014630.2
C4-type zinc ribbon domain-containing protein
COORDINATES: protein motif:HMM:NF006720.0
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019342.2
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:NF019239.2
COORDINATES: similar to AA sequence:RefSeq:WP_010587491.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111107.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108415.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628507.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010587773.1
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647925.1
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015436.2
COORDINATES: protein motif:HMM:NF004126.0
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010588497.1
COORDINATES: protein motif:HMM:NF016162.2
COORDINATES: protein motif:HMM:TIGR03853.1
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649207.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: similar to AA sequence:RefSeq:WP_002648306.1
GO:0008999 - ribosomal protein S5-alanine alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002645421.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002649782.1
COORDINATES: protein motif:HMM:NF016143.2
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:TIGR00197.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628892.1
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629855.1
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: protein motif:HMM:NF013168.2
COORDINATES: protein motif:HMM:NF022389.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647944.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_013111028.1
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002646841.1
COORDINATES: similar to AA sequence:RefSeq:WP_004279177.1
quaternary ammonium compound efflux SMR transporter SugE
COORDINATES: protein motif:HMM:NF014646.2
COORDINATES: similar to AA sequence:RefSeq:WP_013109012.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_010586858.1
COORDINATES: protein motif:HMM:NF004863.0
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF016156.2
COORDINATES: similar to AA sequence:RefSeq:WP_013110525.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: protein motif:HMM:TIGR00857.1
COORDINATES: protein motif:HMM:NF012575.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021578.2
COORDINATES: protein motif:HMM:NF012581.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111936.1
COORDINATES: similar to AA sequence:RefSeq:WP_002643751.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629805.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627262.1
COORDINATES: similar to AA sequence:RefSeq:WP_010585712.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647650.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630813.1
COORDINATES: protein motif:HMM:NF004035.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
sulfate adenylyltransferase subunit CysN
COORDINATES: similar to AA sequence:RefSeq:WP_010583962.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: protein motif:HMM:NF014575.2
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: protein motif:HMM:NF024676.2
WYL domain-containing transcriptional regulator
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626469.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628744.1
COORDINATES: protein motif:HMM:NF014659.2
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002649235.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110409.1
COORDINATES: protein motif:HMM:NF022526.2
COORDINATES: similar to AA sequence:RefSeq:WP_010582731.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628669.1
COORDINATES: protein motif:HMM:NF022273.2
COORDINATES: protein motif:HMM:TIGR00377.1
COORDINATES: protein motif:HMM:NF036531.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
succinate dehydrogenase cytochrome b558 subunit
COORDINATES: protein motif:HMM:NF006392.0
succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016508523.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
succinate dehydrogenase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013110419.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647314.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110781.1
COORDINATES: protein motif:HMM:NF038123.1
COORDINATES: protein motif:HMM:NF025224.2
leucine-rich repeat domain-containing protein
COORDINATES: protein motif:HMM:NF019285.2
COORDINATES: similar to AA sequence:RefSeq:WP_010582779.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF013714.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01979.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013738.2
iron-sulfur cluster assembly scaffold protein
COORDINATES: protein motif:HMM:NF001808.0
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF015686.2
COORDINATES: protein motif:HMM:NF037144.2
COORDINATES: protein motif:HMM:TIGR00871.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010582863.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_013627880.1
COORDINATES: similar to AA sequence:RefSeq:WP_002643957.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002649781.1
COORDINATES: protein motif:HMM:NF014228.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627712.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109127.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628037.1
COORDINATES: protein motif:HMM:NF024595.2
COORDINATES: protein motif:HMM:NF016150.2
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF022468.2
COORDINATES: protein motif:HMM:NF015748.2
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF014036.2
COORDINATES: protein motif:HMM:NF012684.2
peptide chain release factor-like protein
COORDINATES: protein motif:HMM:TIGR03991.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582190.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: protein motif:HMM:NF012982.2
GO:0016311 - dephosphorylation [Evidence IEA]
dual specificity protein phosphatase family protein
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF004064.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: protein motif:HMM:NF004490.0
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024093.2
COORDINATES: protein motif:HMM:NF019238.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644247.1
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: similar to AA sequence:RefSeq:WP_010583561.1
COORDINATES: protein motif:HMM:NF008954.0
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015280.2
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647401.1
COORDINATES: protein motif:HMM:NF024678.2
B12-binding domain-containing radical SAM protein
COORDINATES: protein motif:HMM:NF013044.2
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF012421.2
COORDINATES: similar to AA sequence:RefSeq:WP_000762236.1
COORDINATES: protein motif:HMM:NF013915.2
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF009057.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_002648143.1
COORDINATES: protein motif:HMM:NF010006.0
GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
2-aminoethylphosphonate--pyruvate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_002648692.1
GO:0016827 - hydrolase activity, acting on acid carbon-phosphorus bonds [Evidence IEA]
GO:0019635 - 2-aminoethylphosphonate catabolic process [Evidence IEA]; GO:0019700 - organic phosphonate catabolic process [Evidence IEA]; GO:0019636 - phosphonoacetate metabolic process [Evidence IEA]; GO:0009636 - response to toxic substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF039829.1
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111155.1
COORDINATES: protein motif:HMM:NF019552.2
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013627388.1
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627217.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:NF014470.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_013629225.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021604.2
COORDINATES: protein motif:HMM:NF019095.2
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002647253.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1
COORDINATES: protein motif:HMM:NF025180.2
COORDINATES: protein motif:HMM:TIGR03440.2
COORDINATES: similar to AA sequence:RefSeq:WP_010588233.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108569.1
COORDINATES: protein motif:HMM:NF040320.1
COORDINATES: protein motif:HMM:NF025053.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF015684.2
COORDINATES: protein motif:HMM:NF014071.2
tetrahydromethanopterin-linked C1 transfer pathway
COORDINATES: similar to AA sequence:RefSeq:WP_002514358.1
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629660.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629661.1
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: similar to AA sequence:RefSeq:WP_010584019.1
COORDINATES: protein motif:HMM:TIGR00018.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012442.2
COORDINATES: similar to AA sequence:RefSeq:WP_002645873.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628869.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108690.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_002644669.1
COORDINATES: protein motif:HMM:NF008912.0
COORDINATES: similar to AA sequence:RefSeq:WP_013629757.1
COORDINATES: similar to AA sequence:RefSeq:WP_010888605.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_002648881.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013628455.1
COORDINATES: protein motif:HMM:NF013991.2
triphosphoribosyl-dephospho-CoA synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013110665.1
6-pyruvoyl tetrahydropterin synthase family protein
COORDINATES: protein motif:HMM:TIGR00207.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF012906.2
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630863.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: protein motif:HMM:NF014195.2
flagellar basal body L-ring protein FlgH
COORDINATES: protein motif:HMM:NF014206.2
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: protein motif:HMM:TIGR02734.1
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF012784.2
COORDINATES: protein motif:HMM:NF024674.2
COORDINATES: similar to AA sequence:RefSeq:WP_002645174.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010587241.1
COORDINATES: similar to AA sequence:RefSeq:WP_002643773.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002647396.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013631058.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_010583453.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013108348.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: protein motif:HMM:TIGR00396.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013627437.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629080.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025938.2
COORDINATES: protein motif:HMM:NF012308.2
COORDINATES: protein motif:HMM:NF015821.2
COORDINATES: protein motif:HMM:TIGR02281.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
TIGR02281 family clan AA aspartic protease
COORDINATES: similar to AA sequence:RefSeq:WP_013627203.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630314.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628757.1
COORDINATES: similar to AA sequence:RefSeq:WP_010587296.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002647406.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
Na(+)-translocating NADH-quinone reductase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_002647407.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit B
COORDINATES: protein motif:HMM:TIGR01938.1
Na(+)-translocating NADH-quinone reductase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_002647409.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_013627895.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_013627896.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_013628244.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010586952.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_010587658.1
COORDINATES: protein motif:HMM:NF012383.2
double zinc ribbon domain-containing protein
COORDINATES: protein motif:HMM:NF021526.2
COORDINATES: similar to AA sequence:RefSeq:WP_013110238.1
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:NF016817.2
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: protein motif:HMM:TIGR02100.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629332.1
COORDINATES: protein motif:HMM:NF022415.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629334.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629335.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629336.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629337.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629338.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582108.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582107.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016021 - integral component of membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ribosome-associated ATPase/putative transporter RbbA
COORDINATES: similar to AA sequence:RefSeq:WP_013631039.1
COORDINATES: protein motif:HMM:NF019248.2
COORDINATES: protein motif:HMM:NF022818.2
DUF3179 domain-containing (seleno)protein
COORDINATES: protein motif:HMM:NF015617.2
GO:0046556 - alpha-L-arabinofuranosidase activity [Evidence IEA]
GO:0046373 - L-arabinose metabolic process [Evidence IEA]
non-reducing end alpha-L-arabinofuranosidase family hydrolase
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:NF022281.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628385.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013628386.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649714.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002649715.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649716.1
COORDINATES: similar to AA sequence:RefSeq:WP_007212071.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628391.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649719.1
COORDINATES: protein motif:HMM:NF012476.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628394.1
COORDINATES: similar to AA sequence:RefSeq:WP_004929760.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108768.1
COORDINATES: similar to AA sequence:RefSeq:WP_007875323.1
COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628399.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628400.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649729.1
COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108775.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628404.1
COORDINATES: protein motif:HMM:NF001381.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006718.0
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:NF014232.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630910.1
COORDINATES: protein motif:HMM:NF022432.2
COORDINATES: similar to AA sequence:RefSeq:WP_002648475.1
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: protein motif:HMM:NF012936.2
asparagine synthase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF008113.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: protein motif:HMM:NF004679.0
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013628143.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:NF024298.2
COORDINATES: similar to AA sequence:RefSeq:WP_010583445.1
COORDINATES: protein motif:HMM:NF016071.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646436.1
COORDINATES: protein motif:HMM:TIGR01420.1
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:NF016203.2
COORDINATES: similar to AA sequence:RefSeq:WP_013110663.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013629178.1
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629791.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: protein motif:HMM:TIGR00621.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002647594.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629901.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF024938.2
bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010582233.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648452.1
COORDINATES: protein motif:HMM:NF014448.2
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:NF014910.2
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626704.1
COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010582962.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627685.1
COORDINATES: protein motif:HMM:NF025006.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644418.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_010587859.1
COORDINATES: protein motif:HMM:NF012258.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649244.1
COORDINATES: protein motif:HMM:NF013890.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644483.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014696.2
COORDINATES: similar to AA sequence:RefSeq:WP_002645424.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF019590.2
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF009386.0
COORDINATES: protein motif:HMM:NF004325.0
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: protein motif:HMM:NF022113.2
COORDINATES: protein motif:HMM:TIGR03081.1
COORDINATES: protein motif:HMM:NF013781.2
COORDINATES: protein motif:HMM:NF006944.0
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006958.0
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_000449965.1
GO:0008775 - acetate CoA-transferase activity [Evidence IEA]
GO:0006084 - acetyl-CoA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013225.2
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: protein motif:HMM:TIGR01195.1
COORDINATES: protein motif:HMM:NF015910.2
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_000756756.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF015102.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:NF014165.2
COORDINATES: protein motif:HMM:NF005596.0
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
histidinol-phosphatase HisJ family protein
COORDINATES: protein motif:HMM:NF004887.0
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:NF002346.0
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628662.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_010587026.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629492.1
COORDINATES: protein motif:HMM:NF025385.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626855.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627702.1
COORDINATES: protein motif:HMM:NF040121.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586570.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586571.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586573.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586578.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628194.1
COORDINATES: protein motif:HMM:NF021982.2
COORDINATES: similar to AA sequence:RefSeq:WP_013110053.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:NF000868.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013627046.1
COORDINATES: protein motif:HMM:TIGR03821.1
GO:0072581 - protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010581773.1
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF024891.2
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002648472.1
COORDINATES: protein motif:HMM:NF004852.0
COORDINATES: similar to AA sequence:RefSeq:WP_013626849.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: similar to AA sequence:RefSeq:WP_013108973.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002649411.1
COORDINATES: protein motif:HMM:NF014616.2
YbaB/EbfC family nucleoid-associated protein
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:NF024057.2
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646290.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013630542.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646624.1
COORDINATES: protein motif:HMM:NF015515.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629014.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF011291.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF012264.2
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002645592.1
COORDINATES: protein motif:HMM:NF020650.2
cadherin repeat domain-containing protein
COORDINATES: protein motif:HMM:NF015867.2
prepilin-type cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF019934.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627780.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF019311.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647977.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646319.1
COORDINATES: protein motif:HMM:NF033504.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109947.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627258.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013369.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628410.1
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108777.1
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:TIGR00696.1
COORDINATES: protein motif:HMM:NF023431.2
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_013628570.1
COORDINATES: similar to AA sequence:RefSeq:WP_000116326.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583236.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF013097.2
COORDINATES: protein motif:HMM:NF013408.2
COORDINATES: protein motif:HMM:TIGR00093.1
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: protein motif:HMM:NF016213.2
COORDINATES: similar to AA sequence:RefSeq:WP_010582210.1
COORDINATES: similar to AA sequence:RefSeq:WP_010587349.1
COORDINATES: protein motif:HMM:NF022137.2
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010587722.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013109453.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024879.2
glycine zipper domain-containing protein
COORDINATES: protein motif:HMM:TIGR00244.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025014.2
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013630976.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024245.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626464.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
undecaprenyl-phosphate glucose phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013109506.1
COORDINATES: protein motif:HMM:NF003007.0
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010581985.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583389.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626451.1
COORDINATES: protein motif:HMM:NF016830.2
COORDINATES: protein motif:HMM:NF002537.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IEA]
GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00738.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
COORDINATES: protein motif:HMM:NF015758.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629943.1
COORDINATES: similar to AA sequence:RefSeq:WP_010584757.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111050.1
COORDINATES: protein motif:HMM:NF012511.2
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012562.2
COORDINATES: protein motif:HMM:TIGR01307.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:TIGR03000.1
COORDINATES: protein motif:HMM:NF001453.0
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010586802.1
COORDINATES: protein motif:HMM:TIGR01509.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629812.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019262.2
COORDINATES: similar to AA sequence:RefSeq:WP_002378649.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001399.0
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF008913.0
GO:0020037 - heme binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010588392.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647552.1
COORDINATES: protein motif:HMM:NF012795.2
COORDINATES: similar to AA sequence:RefSeq:WP_000080288.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644172.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110947.1
COORDINATES: protein motif:HMM:NF014655.2
COORDINATES: similar to AA sequence:RefSeq:WP_010587607.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628376.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002686315.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583020.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648575.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628905.1
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:NF014838.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627542.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002643741.1
COORDINATES: protein motif:HMM:NF021221.2
COORDINATES: similar to AA sequence:RefSeq:WP_010583901.1
COORDINATES: protein motif:HMM:NF012439.2
COORDINATES: protein motif:HMM:TIGR01144.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013108454.1
COORDINATES: protein motif:HMM:TIGR01131.1
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:NF027583.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646816.1
phytanoyl-CoA dioxygenase family protein
COORDINATES: protein motif:HMM:NF014296.2
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: protein motif:HMM:NF014604.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: protein motif:HMM:NF018899.2
COORDINATES: protein motif:HMM:NF013283.2
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: protein motif:HMM:NF003015.0
COORDINATES: similar to AA sequence:RefSeq:WP_013629165.1
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: protein motif:HMM:NF014494.2
COORDINATES: similar to AA sequence:RefSeq:WP_013112000.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
putative 4-hydroxybenzoate polyprenyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013108381.1
COORDINATES: protein motif:HMM:NF012640.2
anthranilate synthase component I family protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611841.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
exosortase/archaeosortase family protein
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:NF023410.2
exosortase-associated EpsI family protein
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF015666.2
COORDINATES: protein motif:HMM:NF013753.2
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_046551259.1
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:TIGR03570.1
COORDINATES: similar to AA sequence:RefSeq:WP_013554917.1
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF024778.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111678.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111679.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646808.1
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF018436.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646695.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630512.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630508.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630510.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630509.1
COORDINATES: protein motif:HMM:NF004859.0
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013111307.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111306.1
COORDINATES: protein motif:HMM:NF016838.2
GO:0019645 - anaerobic electron transport chain [Evidence IEA]
dimethyl sulfoxide reductase anchor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013629571.1
GO:0015414 - ABC-type nitrate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015706 - nitrate transmembrane transport [Evidence IEA]
This model describes the ATP binding subunits of ATP-binding cassette (ABC) transporters for nitrate transport, or for bicarbonate transport, in bacteria and archaea; Derived by automated computational analysis using gene prediction method: Protein Homology.
nitrate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013629572.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629574.1
CmpA/NrtA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF003658.0
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013630157.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627856.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647228.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630493.1
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013630492.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630491.1
COORDINATES: protein motif:HMM:NF012481.2
COORDINATES: protein motif:HMM:NF027900.2
COORDINATES: protein motif:HMM:NF027442.2
COORDINATES: protein motif:HMM:TIGR03169.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628820.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628817.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109448.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630200.1
cyclic nucleotide-binding domain-containing thioredoxin-disulfide reductase
COORDINATES: protein motif:HMM:NF025037.2
phosphatidylinositol-specific phospholipase C/glycerophosphodiester phosphodiesterase family protein
COORDINATES: protein motif:HMM:NF013662.2
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: protein motif:HMM:NF024211.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628014.1
COORDINATES: protein motif:HMM:NF040163.1
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: protein motif:HMM:NF008984.0
methylmalonyl-CoA carboxytransferase subunit 5S
COORDINATES: similar to AA sequence:RefSeq:WP_002646094.1
COORDINATES: protein motif:HMM:NF001664.0
COORDINATES: similar to AA sequence:RefSeq:WP_002644967.1
COORDINATES: protein motif:HMM:NF039953.1
COORDINATES: protein motif:HMM:NF014589.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627398.1
COORDINATES: protein motif:HMM:NF006421.0
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110824.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628833.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002644543.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013110821.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628825.1
COORDINATES: similar to AA sequence:RefSeq:WP_013112091.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013108336.1
COORDINATES: protein motif:HMM:NF016199.2
COORDINATES: protein motif:HMM:NF020133.2
beta-ribofuranosylaminobenzene 5'-phosphate synthase
COORDINATES: protein motif:HMM:NF017434.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628967.1
COORDINATES: protein motif:HMM:NF013319.2
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF021363.2
COORDINATES: protein motif:HMM:TIGR03545.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646958.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013109039.1
GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF038117.1
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013626686.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0004783 - sulfite reductase (NADPH) activity [Evidence IEA]
GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]
NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010581819.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629154.1
COORDINATES: protein motif:HMM:NF016244.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646226.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647920.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647181.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046914 - transition metal ion binding [Evidence IEA]
manganese-binding transcriptional regulator MntR
COORDINATES: similar to AA sequence:RefSeq:WP_013628968.1
COORDINATES: protein motif:HMM:NF017522.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: similar to AA sequence:RefSeq:WP_013112432.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010583028.1
COORDINATES: protein motif:HMM:NF014660.2
COORDINATES: protein motif:HMM:NF016955.2
COORDINATES: protein motif:HMM:NF012585.2
COORDINATES: similar to AA sequence:RefSeq:WP_010587331.1
COORDINATES: protein motif:HMM:NF024820.2
COORDINATES: protein motif:HMM:NF006886.1
COORDINATES: protein motif:HMM:TIGR04534.1
COORDINATES: protein motif:HMM:NF023880.2
COORDINATES: protein motif:HMM:NF015554.2
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cbb3-type cytochrome oxidase assembly protein CcoS
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: protein motif:HMM:NF017559.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629367.1
cytochrome c oxidase accessory protein CcoG
COORDINATES: similar to AA sequence:RefSeq:WP_013629370.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647164.1
GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]
GO:0072488 - ammonium transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019268.2
COORDINATES: similar to AA sequence:RefSeq:WP_002645233.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF017939.2
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF036497.2
COORDINATES: similar to AA sequence:RefSeq:WP_010581631.1
COORDINATES: similar to AA sequence:RefSeq:WP_010581630.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629266.1
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: protein motif:HMM:NF007024.0
GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013868.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630055.1
COORDINATES: protein motif:HMM:NF021365.2
COORDINATES: protein motif:HMM:TIGR02352.1
GO:0016647 - oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013628791.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649046.1
COORDINATES: protein motif:HMM:TIGR02480.1
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: protein motif:HMM:NF015892.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649459.1
COORDINATES: protein motif:HMM:NF017946.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644409.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002646289.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627426.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628239.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644563.1
COORDINATES: protein motif:HMM:NF025178.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03960.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
TIGR03960 family B12-binding radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_013629598.1
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:TIGR03915.1
This protein belongs to the uracil DNA glycosylase superfamily, members of which act in excision repair of DNA. However, it belongs more specifically to UdgX branch, whose founding member was found to bind uracil in DNA (where it does not belong), without cleaving it, appears to promote DNA repair by a pathway involving RecA, rather than base excision; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR03467.1
COORDINATES: protein motif:HMM:NF012705.2
phytoene/squalene synthase family protein
COORDINATES: protein motif:HMM:TIGR03464.1
GO:0004311 - farnesyltranstransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010588457.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_010587833.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108539.1
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649168.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
FeoB-associated Cys-rich membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_002645761.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628997.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645856.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_013110539.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF027656.2
COORDINATES: protein motif:HMM:TIGR01398.1
COORDINATES: protein motif:HMM:NF012662.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627753.1
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_010586361.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010586360.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628042.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648946.1
COORDINATES: similar to AA sequence:RefSeq:WP_001266954.1
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629186.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010582677.1
COORDINATES: similar to AA sequence:RefSeq:WP_010588509.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF033503.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004160.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_013112074.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003921.0
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
OB-fold nucleic acid binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010586253.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629853.1
GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013629847.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013627229.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010584741.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: protein motif:HMM:NF020473.2
COORDINATES: similar to AA sequence:RefSeq:WP_010588185.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003952.0
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF026067.2
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF016223.2
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: similar to AA sequence:RefSeq:WP_010585139.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109917.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF039776.1
COORDINATES: protein motif:HMM:NF003300.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004491.0
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002647779.1
COORDINATES: protein motif:HMM:TIGR01693.1
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
GO:0018177 - protein uridylylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010880011.1
COORDINATES: protein motif:HMM:TIGR00636.1
GO:0008817 - cob(I)yrinic acid a,c-diamide adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002645580.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627662.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626494.1
calcineurin-like phosphoesterase family protein
COORDINATES: protein motif:HMM:NF000840.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF037276.2
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627968.1
COORDINATES: protein motif:HMM:NF004231.0
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012534.2
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629663.1
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:TIGR00737.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF038099.1
arsenosugar biosynthesis arsenite methyltransferase ArsM
COORDINATES: protein motif:HMM:TIGR04167.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
Some members of this family are selenoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
arsenosugar biosynthesis radical SAM protein ArsS
COORDINATES: similar to AA sequence:RefSeq:WP_013628310.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF006914.0
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013628043.1
COORDINATES: protein motif:HMM:NF016056.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630255.1
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: similar to AA sequence:RefSeq:WP_016291044.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004862.0
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: protein motif:HMM:NF018738.2
COORDINATES: protein motif:HMM:NF018425.2
COORDINATES: similar to AA sequence:RefSeq:WP_002647178.1
COORDINATES: protein motif:HMM:NF012901.2
COORDINATES: protein motif:HMM:NF013506.2
COORDINATES: protein motif:HMM:NF022447.2
COORDINATES: protein motif:HMM:NF024918.2
COORDINATES: protein motif:HMM:NF021645.2
PhoPQ-activated protein PqaA family protein
COORDINATES: protein motif:HMM:NF012739.2
COORDINATES: similar to AA sequence:RefSeq:WP_002644653.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626453.1
TIGR03364 family FAD-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF017495.2
GO:0031362 - anchored component of external side of plasma membrane [Evidence IEA]; GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002646232.1
COORDINATES: protein motif:HMM:NF004281.0
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: similar to AA sequence:RefSeq:WP_002646229.1
COORDINATES: similar to AA sequence:RefSeq:WP_010588450.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_013109763.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109762.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583487.1
COORDINATES: protein motif:HMM:NF020279.2
cytochrome c oxidase assembly factor Coa1 family protein
COORDINATES: protein motif:HMM:NF015148.2
COORDINATES: protein motif:HMM:NF037610.2
COORDINATES: protein motif:HMM:NF009381.0
COORDINATES: protein motif:HMM:NF014119.2
COORDINATES: similar to AA sequence:RefSeq:WP_003328964.1
COORDINATES: similar to AA sequence:RefSeq:WP_002643661.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_010586270.1
COORDINATES: similar to AA sequence:RefSeq:WP_002643659.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012696.2
COORDINATES: protein motif:HMM:NF013421.2
COORDINATES: similar to AA sequence:RefSeq:WP_013111216.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010582004.1
COORDINATES: similar to AA sequence:RefSeq:WP_002644482.1
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013109197.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003148783.1
COORDINATES: protein motif:HMM:NF024981.2
COORDINATES: protein motif:HMM:NF013725.2
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649375.1
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626856.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010584398.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF014652.2
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013108377.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: protein motif:HMM:NF013478.2
COORDINATES: protein motif:HMM:NF013480.2
COORDINATES: protein motif:HMM:NF009438.0
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_010586173.1
COORDINATES: protein motif:HMM:NF014126.2
COORDINATES: similar to AA sequence:RefSeq:WP_002645665.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013627410.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627412.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627413.1
COORDINATES: protein motif:HMM:NF028222.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF016153.2
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: protein motif:HMM:NF014665.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0006784 - heme A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: similar to AA sequence:RefSeq:WP_013110038.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002649238.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_002645100.1
COORDINATES: protein motif:HMM:NF021354.2
COORDINATES: protein motif:HMM:NF001209.0
COORDINATES: similar to AA sequence:RefSeq:WP_013627418.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010582992.1
COORDINATES: protein motif:HMM:TIGR02098.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628919.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630633.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649006.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015779.2
COORDINATES: protein motif:HMM:NF015699.2
COORDINATES: protein motif:HMM:NF012832.2
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013630638.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_010584159.1
COORDINATES: protein motif:HMM:NF011443.0
putative manganese-dependent inorganic diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_002649561.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645121.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645726.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111626.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002648435.1
COORDINATES: similar to AA sequence:RefSeq:WP_010581778.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626701.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108327.1
COORDINATES: similar to AA sequence:RefSeq:WP_003233473.1
COORDINATES: similar to AA sequence:RefSeq:WP_010584932.1
GO:0004089 - carbonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02063.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110712.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_013110849.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110850.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_013110851.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_010586828.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586827.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629244.1
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629779.1
COORDINATES: protein motif:HMM:NF013432.2
COORDINATES: protein motif:HMM:NF013043.2
COORDINATES: similar to AA sequence:RefSeq:WP_010582348.1
COORDINATES: similar to AA sequence:RefSeq:WP_013109883.1
COORDINATES: protein motif:HMM:TIGR00178.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004398583.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630758.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010586598.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:NF016367.2
COORDINATES: protein motif:HMM:NF013755.2
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: protein motif:HMM:NF016290.2
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013626894.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006757.0
GO:0003994 - aconitate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: protein motif:HMM:NF004226.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021778.2
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_002644024.1
CPXCG motif-containing cysteine-rich protein
COORDINATES: protein motif:HMM:NF015962.2
COORDINATES: protein motif:HMM:TIGR04283.1
TIGR04283 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002645551.1
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00408.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
flagellar hook-basal body complex protein
COORDINATES: protein motif:HMM:NF015896.2
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013628785.1
GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO:0046034 - ATP metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: protein motif:HMM:NF026192.2
COORDINATES: protein motif:HMM:NF013664.2
COORDINATES: protein motif:HMM:NF014143.2
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:TIGR01395.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: protein motif:HMM:NF012674.2
COORDINATES: protein motif:HMM:NF016089.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628678.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648023.1
COORDINATES: similar to AA sequence:RefSeq:WP_013631081.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630849.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010583980.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110699.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010588494.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_013626393.1
PAS and helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF025268.2
COORDINATES: similar to AA sequence:RefSeq:WP_013630631.1
COORDINATES: protein motif:HMM:TIGR00135.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_010581881.1
COORDINATES: protein motif:HMM:NF003745.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: protein motif:HMM:NF016252.2
COORDINATES: protein motif:HMM:NF021596.2
COORDINATES: protein motif:HMM:NF003958.0
glucans biosynthesis glucosyltransferase MdoH
COORDINATES: protein motif:HMM:TIGR01181.1
COORDINATES: protein motif:HMM:TIGR02436.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626905.1
COORDINATES: protein motif:HMM:NF017345.2
FdtA/QdtA family cupin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_043472394.1
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: similar to AA sequence:RefSeq:WP_011123210.1
COORDINATES: similar to AA sequence:RefSeq:WP_010587059.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628447.1
COORDINATES: similar to AA sequence:RefSeq:WP_005377116.1
COORDINATES: protein motif:HMM:NF016269.2
lipid-binding SYLF domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013110920.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629600.1
COORDINATES: similar to AA sequence:RefSeq:WP_013628832.1
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649111.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111006.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630201.1
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004841633.1
GO:0008736 - L-fucose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019317 - fucose catabolic process [Evidence IEA]; GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013110633.1
COORDINATES: protein motif:HMM:NF015083.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627077.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627421.1
COORDINATES: protein motif:HMM:NF024120.2
glycosyl hydrolase family 28-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_013110795.1
COORDINATES: similar to AA sequence:RefSeq:WP_013112155.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646842.1
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013630439.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630437.1
COORDINATES: similar to AA sequence:RefSeq:WP_013630186.1
COORDINATES: protein motif:HMM:NF026235.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629347.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645084.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645085.1
COORDINATES: similar to AA sequence:RefSeq:WP_002645086.1
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002648947.1
COORDINATES: protein motif:HMM:NF028442.2
COORDINATES: similar to AA sequence:RefSeq:WP_002646266.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629452.1
COORDINATES: protein motif:HMM:NF014502.2
COORDINATES: protein motif:HMM:TIGR01182.1
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010582903.1
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160730.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647554.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646157.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002646161.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583956.1
COORDINATES: protein motif:HMM:NF019230.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: similar to AA sequence:RefSeq:WP_013627309.1
COORDINATES: protein motif:HMM:NF003013.0
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647495.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013627969.1
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013630436.1
COORDINATES: similar to AA sequence:RefSeq:WP_013108574.1
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_013629825.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013628361.1
COORDINATES: similar to AA sequence:RefSeq:WP_013629084.1
COORDINATES: similar to AA sequence:RefSeq:WP_013111743.1
COORDINATES: similar to AA sequence:RefSeq:WP_013112242.1
COORDINATES: similar to AA sequence:RefSeq:WP_013627684.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014016.2
COORDINATES: protein motif:HMM:NF012335.2
COORDINATES: similar to AA sequence:RefSeq:WP_011575334.1
COORDINATES: similar to AA sequence:RefSeq:WP_014232205.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290238.1
COORDINATES: similar to AA sequence:RefSeq:WP_002646390.1
tetratricopeptide repeat-containing sulfotransferase family protein
COORDINATES: protein motif:HMM:TIGR01554.2
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF002727.0
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
esterase-like activity of phytase family protein
COORDINATES: protein motif:HMM:TIGR00318.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582875.1
COORDINATES: similar to AA sequence:RefSeq:WP_010582471.1
COORDINATES: protein motif:HMM:NF014626.2
COORDINATES: similar to AA sequence:RefSeq:WP_013626487.1
COORDINATES: protein motif:HMM:NF014074.2
COORDINATES: similar to AA sequence:RefSeq:WP_010586653.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110437.1
COORDINATES: protein motif:HMM:NF016834.2
lecithin retinol acyltransferase family protein
COORDINATES: protein motif:HMM:NF020090.2
COORDINATES: protein motif:HMM:NF022769.2
COORDINATES: protein motif:HMM:NF024502.2
phage integrase SAM-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010583686.1
COORDINATES: similar to AA sequence:RefSeq:WP_010583687.1
COORDINATES: protein motif:HMM:NF015995.2
glycine betaine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF015012.2
L-dopachrome tautomerase-related protein
COORDINATES: protein motif:HMM:NF014048.2
GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020177.2
COORDINATES: similar to AA sequence:RefSeq:WP_013628483.1
COORDINATES: similar to AA sequence:RefSeq:WP_013110746.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647607.1
COORDINATES: similar to AA sequence:RefSeq:WP_002647606.1
COORDINATES: protein motif:HMM:NF025839.2
COORDINATES: protein motif:HMM:NF023164.2
COORDINATES: similar to AA sequence:RefSeq:WP_013108584.1
COORDINATES: protein motif:HMM:NF014950.2
COORDINATES: similar to AA sequence:RefSeq:WP_013108674.1
COORDINATES: similar to AA sequence:RefSeq:WP_010586638.1
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00281.1
GO:0007059 - chromosome segregation [Evidence IEA]